BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv1809 Length=468 Score E Sequences producing significant alignments: (Bits) Value gi|57116922|ref|YP_177845.1| PPE family protein [Mycobacterium t... 919 0.0 gi|289447423|ref|ZP_06437167.1| PPE family protein [Mycobacteriu... 917 0.0 gi|148823022|ref|YP_001287776.1| PPE family protein [Mycobacteri... 917 0.0 gi|254231991|ref|ZP_04925318.1| PPE family protein [Mycobacteriu... 917 0.0 gi|15841279|ref|NP_336316.1| PPE family protein [Mycobacterium t... 917 0.0 gi|289443283|ref|ZP_06433027.1| PPE family protein [Mycobacteriu... 917 0.0 gi|340626818|ref|YP_004745270.1| PPE family protein [Mycobacteri... 915 0.0 gi|289574486|ref|ZP_06454713.1| PPE family protein [Mycobacteriu... 914 0.0 gi|289745759|ref|ZP_06505137.1| PPE family protein [Mycobacteriu... 814 0.0 gi|41407620|ref|NP_960456.1| hypothetical protein MAP1522 [Mycob... 432 5e-119 gi|212595990|gb|ACJ35542.1| PPE17 [Mycobacterium avium subsp. av... 426 5e-117 gi|118462708|ref|YP_882091.1| PPE family protein [Mycobacterium ... 417 2e-114 gi|212596535|gb|ACJ35586.1| PPE17 [Mycobacterium intracellulare ... 416 5e-114 gi|254823257|ref|ZP_05228258.1| hypothetical protein MintA_25229... 380 4e-103 gi|31792998|ref|NP_855491.1| hypothetical protein Mb1838 [Mycoba... 362 1e-97 gi|254775380|ref|ZP_05216896.1| hypothetical protein MaviaA2_120... 357 3e-96 gi|31792990|ref|NP_855483.1| PPE family protein [Mycobacterium b... 325 9e-87 gi|15841272|ref|NP_336309.1| PPE family protein [Mycobacterium t... 324 2e-86 gi|340626812|ref|YP_004745264.1| PPE family protein [Mycobacteri... 323 3e-86 gi|339294739|gb|AEJ46850.1| PPE family protein [Mycobacterium tu... 322 9e-86 gi|183981477|ref|YP_001849768.1| PPE family protein [Mycobacteri... 315 1e-83 gi|183982692|ref|YP_001850983.1| PPE family protein, PPE30 [Myco... 311 2e-82 gi|118618456|ref|YP_906788.1| PPE family protein [Mycobacterium ... 298 2e-78 gi|289443274|ref|ZP_06433018.1| PPE family protein [Mycobacteriu... 293 5e-77 gi|254231986|ref|ZP_04925313.1| PPE family protein [Mycobacteriu... 286 5e-75 gi|240171260|ref|ZP_04749919.1| PPE family protein [Mycobacteriu... 285 2e-74 gi|118462279|ref|YP_882537.1| PPE family protein [Mycobacterium ... 276 4e-72 gi|296170357|ref|ZP_06851948.1| PPE family protein [Mycobacteriu... 274 3e-71 gi|254775385|ref|ZP_05216901.1| hypothetical protein MaviaA2_120... 271 2e-70 gi|212596776|gb|ACJ35605.1| PPE44 [Mycobacterium intracellulare ... 270 5e-70 gi|296164792|ref|ZP_06847352.1| PPE family protein [Mycobacteriu... 268 1e-69 gi|41407251|ref|NP_960087.1| hypothetical protein MAP1153 [Mycob... 261 2e-67 gi|336457981|gb|EGO36968.1| PPE-repeat containing protein [Mycob... 260 3e-67 gi|41407617|ref|NP_960453.1| hypothetical protein MAP1519 [Mycob... 259 9e-67 gi|118465656|ref|YP_882095.1| PPE family protein [Mycobacterium ... 258 2e-66 gi|240173095|ref|ZP_04751753.1| PPE family protein, PPE30 [Mycob... 256 5e-66 gi|183981478|ref|YP_001849769.1| PPE family protein [Mycobacteri... 253 5e-65 gi|212596561|gb|ACJ35588.1| PPE19 [Mycobacterium intracellulare ... 251 3e-64 gi|254823261|ref|ZP_05228262.1| hypothetical protein MintA_25249... 250 3e-64 gi|212596610|gb|ACJ35592.1| PPE28 [Mycobacterium intracellulare ... 248 1e-63 gi|289750373|ref|ZP_06509751.1| PPE family protein [Mycobacteriu... 245 1e-62 gi|254822973|ref|ZP_05227974.1| PPE family protein [Mycobacteriu... 237 3e-60 gi|342859619|ref|ZP_08716272.1| PPE family protein [Mycobacteriu... 236 5e-60 gi|240169716|ref|ZP_04748375.1| PPE family protein [Mycobacteriu... 233 4e-59 gi|289761952|ref|ZP_06521330.1| PPE family protein [Mycobacteriu... 233 6e-59 gi|31792997|ref|NP_855490.1| PPE family protein [Mycobacterium b... 231 2e-58 gi|57116921|ref|YP_177844.1| PPE family protein [Mycobacterium t... 230 5e-58 gi|294996719|ref|ZP_06802410.1| PPE family protein [Mycobacteriu... 230 5e-58 gi|289447416|ref|ZP_06437160.1| PPE family protein [Mycobacteriu... 229 5e-58 gi|167967397|ref|ZP_02549674.1| PPE family protein [Mycobacteriu... 228 1e-57 >gi|57116922|ref|YP_177845.1| PPE family protein [Mycobacterium tuberculosis H37Rv] gi|148661615|ref|YP_001283138.1| PPE family protein [Mycobacterium tuberculosis H37Ra] gi|167967396|ref|ZP_02549673.1| PPE family protein [Mycobacterium tuberculosis H37Ra] 11 more sequence titles Length=468 Score = 919 bits (2374), Expect = 0.0, Method: Compositional matrix adjust. Identities = 468/468 (100%), Positives = 468/468 (100%), Gaps = 0/468 (0%) Query 1 MDFGLQPPEITSGEMYLGPGAGPMLAAAVAWDGLAAELQSMAASYASIVEGMASESWLGP 60 MDFGLQPPEITSGEMYLGPGAGPMLAAAVAWDGLAAELQSMAASYASIVEGMASESWLGP Sbjct 1 MDFGLQPPEITSGEMYLGPGAGPMLAAAVAWDGLAAELQSMAASYASIVEGMASESWLGP 60 Query 61 SSAGMAAAAAPYVTWMSGTSAQAKAAADQARAAVVAYETAFAAVVPPPQIAANRSQLISL 120 SSAGMAAAAAPYVTWMSGTSAQAKAAADQARAAVVAYETAFAAVVPPPQIAANRSQLISL Sbjct 61 SSAGMAAAAAPYVTWMSGTSAQAKAAADQARAAVVAYETAFAAVVPPPQIAANRSQLISL 120 Query 121 VATNIFGQNTAAIAATEAEYGEMWAQDTMAMFGYASSSATASRLTPFTAPPQTTNPSGLA 180 VATNIFGQNTAAIAATEAEYGEMWAQDTMAMFGYASSSATASRLTPFTAPPQTTNPSGLA Sbjct 121 VATNIFGQNTAAIAATEAEYGEMWAQDTMAMFGYASSSATASRLTPFTAPPQTTNPSGLA 180 Query 181 GQAAATGQATALASGTNAVTTALSSAAAQFPFDIIPTLLQGLATLSTQYTQLMGQLINAI 240 GQAAATGQATALASGTNAVTTALSSAAAQFPFDIIPTLLQGLATLSTQYTQLMGQLINAI Sbjct 181 GQAAATGQATALASGTNAVTTALSSAAAQFPFDIIPTLLQGLATLSTQYTQLMGQLINAI 240 Query 241 FGPTGATTYQNVFVTAANVTKFSTWANDAMSAPNLGMTEFKVFWQPPPAPEIPKSSLGAG 300 FGPTGATTYQNVFVTAANVTKFSTWANDAMSAPNLGMTEFKVFWQPPPAPEIPKSSLGAG Sbjct 241 FGPTGATTYQNVFVTAANVTKFSTWANDAMSAPNLGMTEFKVFWQPPPAPEIPKSSLGAG 300 Query 301 LGLRSGLSAGLAHAASAGLGQANLVGDLSVPPSWASATPAVRLVANTLPATSLAAAPATQ 360 LGLRSGLSAGLAHAASAGLGQANLVGDLSVPPSWASATPAVRLVANTLPATSLAAAPATQ Sbjct 301 LGLRSGLSAGLAHAASAGLGQANLVGDLSVPPSWASATPAVRLVANTLPATSLAAAPATQ 360 Query 361 IPANLLGQMALGSMTGGALGAAAPAIYTGSGARARANGGTPSAEPVKLEAVIAQLQKQPD 420 IPANLLGQMALGSMTGGALGAAAPAIYTGSGARARANGGTPSAEPVKLEAVIAQLQKQPD Sbjct 361 IPANLLGQMALGSMTGGALGAAAPAIYTGSGARARANGGTPSAEPVKLEAVIAQLQKQPD 420 Query 421 AVRHWNVDKADLDGLLDRLSKQPGIHAVHVSNGDKPKVALPDTQLGSH 468 AVRHWNVDKADLDGLLDRLSKQPGIHAVHVSNGDKPKVALPDTQLGSH Sbjct 421 AVRHWNVDKADLDGLLDRLSKQPGIHAVHVSNGDKPKVALPDTQLGSH 468 >gi|289447423|ref|ZP_06437167.1| PPE family protein [Mycobacterium tuberculosis CPHL_A] gi|289569881|ref|ZP_06450108.1| PPE family protein [Mycobacterium tuberculosis T17] gi|289750382|ref|ZP_06509760.1| PPE family protein [Mycobacterium tuberculosis T92] gi|289753904|ref|ZP_06513282.1| PPE family protein [Mycobacterium tuberculosis EAS054] gi|289420381|gb|EFD17582.1| PPE family protein [Mycobacterium tuberculosis CPHL_A] gi|289543635|gb|EFD47283.1| PPE family protein [Mycobacterium tuberculosis T17] gi|289690969|gb|EFD58398.1| PPE family protein [Mycobacterium tuberculosis T92] gi|289694491|gb|EFD61920.1| PPE family protein [Mycobacterium tuberculosis EAS054] Length=472 Score = 917 bits (2371), Expect = 0.0, Method: Compositional matrix adjust. Identities = 467/468 (99%), Positives = 468/468 (100%), Gaps = 0/468 (0%) Query 1 MDFGLQPPEITSGEMYLGPGAGPMLAAAVAWDGLAAELQSMAASYASIVEGMASESWLGP 60 MDFGLQPPEITSGEMYLGPGAGPMLAAAVAWDGLAAELQSMAASYASIVEGMASESWLGP Sbjct 3 MDFGLQPPEITSGEMYLGPGAGPMLAAAVAWDGLAAELQSMAASYASIVEGMASESWLGP 62 Query 61 SSAGMAAAAAPYVTWMSGTSAQAKAAADQARAAVVAYETAFAAVVPPPQIAANRSQLISL 120 SSAGMAAAAAPYVTWMSGTSAQAKAAADQARAAVVAYETAFAAVVPPPQIAANRSQLISL Sbjct 63 SSAGMAAAAAPYVTWMSGTSAQAKAAADQARAAVVAYETAFAAVVPPPQIAANRSQLISL 122 Query 121 VATNIFGQNTAAIAATEAEYGEMWAQDTMAMFGYASSSATASRLTPFTAPPQTTNPSGLA 180 VATNIFGQNTAAIAATEAEYGEMWAQDTMAMFGYASSSATASRLTPFTAPPQTTNPSGLA Sbjct 123 VATNIFGQNTAAIAATEAEYGEMWAQDTMAMFGYASSSATASRLTPFTAPPQTTNPSGLA 182 Query 181 GQAAATGQATALASGTNAVTTALSSAAAQFPFDIIPTLLQGLATLSTQYTQLMGQLINAI 240 GQAAATGQATALASGTNAVTTALSSAAAQFPFDIIPTLLQGLATLSTQYTQLMGQLINAI Sbjct 183 GQAAATGQATALASGTNAVTTALSSAAAQFPFDIIPTLLQGLATLSTQYTQLMGQLINAI 242 Query 241 FGPTGATTYQNVFVTAANVTKFSTWANDAMSAPNLGMTEFKVFWQPPPAPEIPKSSLGAG 300 FGPTGATTYQN+FVTAANVTKFSTWANDAMSAPNLGMTEFKVFWQPPPAPEIPKSSLGAG Sbjct 243 FGPTGATTYQNLFVTAANVTKFSTWANDAMSAPNLGMTEFKVFWQPPPAPEIPKSSLGAG 302 Query 301 LGLRSGLSAGLAHAASAGLGQANLVGDLSVPPSWASATPAVRLVANTLPATSLAAAPATQ 360 LGLRSGLSAGLAHAASAGLGQANLVGDLSVPPSWASATPAVRLVANTLPATSLAAAPATQ Sbjct 303 LGLRSGLSAGLAHAASAGLGQANLVGDLSVPPSWASATPAVRLVANTLPATSLAAAPATQ 362 Query 361 IPANLLGQMALGSMTGGALGAAAPAIYTGSGARARANGGTPSAEPVKLEAVIAQLQKQPD 420 IPANLLGQMALGSMTGGALGAAAPAIYTGSGARARANGGTPSAEPVKLEAVIAQLQKQPD Sbjct 363 IPANLLGQMALGSMTGGALGAAAPAIYTGSGARARANGGTPSAEPVKLEAVIAQLQKQPD 422 Query 421 AVRHWNVDKADLDGLLDRLSKQPGIHAVHVSNGDKPKVALPDTQLGSH 468 AVRHWNVDKADLDGLLDRLSKQPGIHAVHVSNGDKPKVALPDTQLGSH Sbjct 423 AVRHWNVDKADLDGLLDRLSKQPGIHAVHVSNGDKPKVALPDTQLGSH 470 >gi|148823022|ref|YP_001287776.1| PPE family protein [Mycobacterium tuberculosis F11] gi|253799147|ref|YP_003032148.1| PPE family protein [Mycobacterium tuberculosis KZN 1435] gi|254364637|ref|ZP_04980683.1| PPE family protein [Mycobacterium tuberculosis str. Haarlem] gi|289554417|ref|ZP_06443627.1| PPE family protein [Mycobacterium tuberculosis KZN 605] gi|134150151|gb|EBA42196.1| PPE family protein [Mycobacterium tuberculosis str. Haarlem] gi|148721549|gb|ABR06174.1| PPE family protein [Mycobacterium tuberculosis F11] gi|253320650|gb|ACT25253.1| PPE family protein [Mycobacterium tuberculosis KZN 1435] gi|289439049|gb|EFD21542.1| PPE family protein [Mycobacterium tuberculosis KZN 605] Length=470 Score = 917 bits (2370), Expect = 0.0, Method: Compositional matrix adjust. Identities = 467/468 (99%), Positives = 468/468 (100%), Gaps = 0/468 (0%) Query 1 MDFGLQPPEITSGEMYLGPGAGPMLAAAVAWDGLAAELQSMAASYASIVEGMASESWLGP 60 MDFGLQPPEITSGEMYLGPGAGPMLAAAVAWDGLAAELQSMAASYASIVEGMASESWLGP Sbjct 3 MDFGLQPPEITSGEMYLGPGAGPMLAAAVAWDGLAAELQSMAASYASIVEGMASESWLGP 62 Query 61 SSAGMAAAAAPYVTWMSGTSAQAKAAADQARAAVVAYETAFAAVVPPPQIAANRSQLISL 120 SSAGMAAAAAPYVTWMSGTSAQAKAAADQARAAVVAYETAFAAVVPPPQIAANRSQLISL Sbjct 63 SSAGMAAAAAPYVTWMSGTSAQAKAAADQARAAVVAYETAFAAVVPPPQIAANRSQLISL 122 Query 121 VATNIFGQNTAAIAATEAEYGEMWAQDTMAMFGYASSSATASRLTPFTAPPQTTNPSGLA 180 VATNIFGQNTAAIAATEAEYGEMWAQDTMAMFGYASSSATASRLTPFTAPPQTTNPSGLA Sbjct 123 VATNIFGQNTAAIAATEAEYGEMWAQDTMAMFGYASSSATASRLTPFTAPPQTTNPSGLA 182 Query 181 GQAAATGQATALASGTNAVTTALSSAAAQFPFDIIPTLLQGLATLSTQYTQLMGQLINAI 240 GQAAATGQATALASGTNAVTTALSSAAAQFPFDIIPTLLQGLATLSTQYTQLMGQLINAI Sbjct 183 GQAAATGQATALASGTNAVTTALSSAAAQFPFDIIPTLLQGLATLSTQYTQLMGQLINAI 242 Query 241 FGPTGATTYQNVFVTAANVTKFSTWANDAMSAPNLGMTEFKVFWQPPPAPEIPKSSLGAG 300 FGPTGATTYQN+FVTAANVTKFSTWANDAMSAPNLGMTEFKVFWQPPPAPEIPKSSLGAG Sbjct 243 FGPTGATTYQNLFVTAANVTKFSTWANDAMSAPNLGMTEFKVFWQPPPAPEIPKSSLGAG 302 Query 301 LGLRSGLSAGLAHAASAGLGQANLVGDLSVPPSWASATPAVRLVANTLPATSLAAAPATQ 360 LGLRSGLSAGLAHAASAGLGQANLVGDLSVPPSWASATPAVRLVANTLPATSLAAAPATQ Sbjct 303 LGLRSGLSAGLAHAASAGLGQANLVGDLSVPPSWASATPAVRLVANTLPATSLAAAPATQ 362 Query 361 IPANLLGQMALGSMTGGALGAAAPAIYTGSGARARANGGTPSAEPVKLEAVIAQLQKQPD 420 IPANLLGQMALGSMTGGALGAAAPAIYTGSGARARANGGTPSAEPVKLEAVIAQLQKQPD Sbjct 363 IPANLLGQMALGSMTGGALGAAAPAIYTGSGARARANGGTPSAEPVKLEAVIAQLQKQPD 422 Query 421 AVRHWNVDKADLDGLLDRLSKQPGIHAVHVSNGDKPKVALPDTQLGSH 468 AVRHWNVDKADLDGLLDRLSKQPGIHAVHVSNGDKPKVALPDTQLGSH Sbjct 423 AVRHWNVDKADLDGLLDRLSKQPGIHAVHVSNGDKPKVALPDTQLGSH 470 >gi|254231991|ref|ZP_04925318.1| PPE family protein [Mycobacterium tuberculosis C] gi|254550817|ref|ZP_05141264.1| PPE family protein [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|289757912|ref|ZP_06517290.1| PPE family protein [Mycobacterium tuberculosis T85] 32 more sequence titles Length=468 Score = 917 bits (2369), Expect = 0.0, Method: Compositional matrix adjust. Identities = 467/468 (99%), Positives = 468/468 (100%), Gaps = 0/468 (0%) Query 1 MDFGLQPPEITSGEMYLGPGAGPMLAAAVAWDGLAAELQSMAASYASIVEGMASESWLGP 60 MDFGLQPPEITSGEMYLGPGAGPMLAAAVAWDGLAAELQSMAASYASIVEGMASESWLGP Sbjct 1 MDFGLQPPEITSGEMYLGPGAGPMLAAAVAWDGLAAELQSMAASYASIVEGMASESWLGP 60 Query 61 SSAGMAAAAAPYVTWMSGTSAQAKAAADQARAAVVAYETAFAAVVPPPQIAANRSQLISL 120 SSAGMAAAAAPYVTWMSGTSAQAKAAADQARAAVVAYETAFAAVVPPPQIAANRSQLISL Sbjct 61 SSAGMAAAAAPYVTWMSGTSAQAKAAADQARAAVVAYETAFAAVVPPPQIAANRSQLISL 120 Query 121 VATNIFGQNTAAIAATEAEYGEMWAQDTMAMFGYASSSATASRLTPFTAPPQTTNPSGLA 180 VATNIFGQNTAAIAATEAEYGEMWAQDTMAMFGYASSSATASRLTPFTAPPQTTNPSGLA Sbjct 121 VATNIFGQNTAAIAATEAEYGEMWAQDTMAMFGYASSSATASRLTPFTAPPQTTNPSGLA 180 Query 181 GQAAATGQATALASGTNAVTTALSSAAAQFPFDIIPTLLQGLATLSTQYTQLMGQLINAI 240 GQAAATGQATALASGTNAVTTALSSAAAQFPFDIIPTLLQGLATLSTQYTQLMGQLINAI Sbjct 181 GQAAATGQATALASGTNAVTTALSSAAAQFPFDIIPTLLQGLATLSTQYTQLMGQLINAI 240 Query 241 FGPTGATTYQNVFVTAANVTKFSTWANDAMSAPNLGMTEFKVFWQPPPAPEIPKSSLGAG 300 FGPTGATTYQN+FVTAANVTKFSTWANDAMSAPNLGMTEFKVFWQPPPAPEIPKSSLGAG Sbjct 241 FGPTGATTYQNLFVTAANVTKFSTWANDAMSAPNLGMTEFKVFWQPPPAPEIPKSSLGAG 300 Query 301 LGLRSGLSAGLAHAASAGLGQANLVGDLSVPPSWASATPAVRLVANTLPATSLAAAPATQ 360 LGLRSGLSAGLAHAASAGLGQANLVGDLSVPPSWASATPAVRLVANTLPATSLAAAPATQ Sbjct 301 LGLRSGLSAGLAHAASAGLGQANLVGDLSVPPSWASATPAVRLVANTLPATSLAAAPATQ 360 Query 361 IPANLLGQMALGSMTGGALGAAAPAIYTGSGARARANGGTPSAEPVKLEAVIAQLQKQPD 420 IPANLLGQMALGSMTGGALGAAAPAIYTGSGARARANGGTPSAEPVKLEAVIAQLQKQPD Sbjct 361 IPANLLGQMALGSMTGGALGAAAPAIYTGSGARARANGGTPSAEPVKLEAVIAQLQKQPD 420 Query 421 AVRHWNVDKADLDGLLDRLSKQPGIHAVHVSNGDKPKVALPDTQLGSH 468 AVRHWNVDKADLDGLLDRLSKQPGIHAVHVSNGDKPKVALPDTQLGSH Sbjct 421 AVRHWNVDKADLDGLLDRLSKQPGIHAVHVSNGDKPKVALPDTQLGSH 468 >gi|15841279|ref|NP_336316.1| PPE family protein [Mycobacterium tuberculosis CDC1551] gi|13881507|gb|AAK46130.1| PPE family protein [Mycobacterium tuberculosis CDC1551] Length=694 Score = 917 bits (2369), Expect = 0.0, Method: Compositional matrix adjust. Identities = 467/468 (99%), Positives = 468/468 (100%), Gaps = 0/468 (0%) Query 1 MDFGLQPPEITSGEMYLGPGAGPMLAAAVAWDGLAAELQSMAASYASIVEGMASESWLGP 60 MDFGLQPPEITSGEMYLGPGAGPMLAAAVAWDGLAAELQSMAASYASIVEGMASESWLGP Sbjct 227 MDFGLQPPEITSGEMYLGPGAGPMLAAAVAWDGLAAELQSMAASYASIVEGMASESWLGP 286 Query 61 SSAGMAAAAAPYVTWMSGTSAQAKAAADQARAAVVAYETAFAAVVPPPQIAANRSQLISL 120 SSAGMAAAAAPYVTWMSGTSAQAKAAADQARAAVVAYETAFAAVVPPPQIAANRSQLISL Sbjct 287 SSAGMAAAAAPYVTWMSGTSAQAKAAADQARAAVVAYETAFAAVVPPPQIAANRSQLISL 346 Query 121 VATNIFGQNTAAIAATEAEYGEMWAQDTMAMFGYASSSATASRLTPFTAPPQTTNPSGLA 180 VATNIFGQNTAAIAATEAEYGEMWAQDTMAMFGYASSSATASRLTPFTAPPQTTNPSGLA Sbjct 347 VATNIFGQNTAAIAATEAEYGEMWAQDTMAMFGYASSSATASRLTPFTAPPQTTNPSGLA 406 Query 181 GQAAATGQATALASGTNAVTTALSSAAAQFPFDIIPTLLQGLATLSTQYTQLMGQLINAI 240 GQAAATGQATALASGTNAVTTALSSAAAQFPFDIIPTLLQGLATLSTQYTQLMGQLINAI Sbjct 407 GQAAATGQATALASGTNAVTTALSSAAAQFPFDIIPTLLQGLATLSTQYTQLMGQLINAI 466 Query 241 FGPTGATTYQNVFVTAANVTKFSTWANDAMSAPNLGMTEFKVFWQPPPAPEIPKSSLGAG 300 FGPTGATTYQN+FVTAANVTKFSTWANDAMSAPNLGMTEFKVFWQPPPAPEIPKSSLGAG Sbjct 467 FGPTGATTYQNLFVTAANVTKFSTWANDAMSAPNLGMTEFKVFWQPPPAPEIPKSSLGAG 526 Query 301 LGLRSGLSAGLAHAASAGLGQANLVGDLSVPPSWASATPAVRLVANTLPATSLAAAPATQ 360 LGLRSGLSAGLAHAASAGLGQANLVGDLSVPPSWASATPAVRLVANTLPATSLAAAPATQ Sbjct 527 LGLRSGLSAGLAHAASAGLGQANLVGDLSVPPSWASATPAVRLVANTLPATSLAAAPATQ 586 Query 361 IPANLLGQMALGSMTGGALGAAAPAIYTGSGARARANGGTPSAEPVKLEAVIAQLQKQPD 420 IPANLLGQMALGSMTGGALGAAAPAIYTGSGARARANGGTPSAEPVKLEAVIAQLQKQPD Sbjct 587 IPANLLGQMALGSMTGGALGAAAPAIYTGSGARARANGGTPSAEPVKLEAVIAQLQKQPD 646 Query 421 AVRHWNVDKADLDGLLDRLSKQPGIHAVHVSNGDKPKVALPDTQLGSH 468 AVRHWNVDKADLDGLLDRLSKQPGIHAVHVSNGDKPKVALPDTQLGSH Sbjct 647 AVRHWNVDKADLDGLLDRLSKQPGIHAVHVSNGDKPKVALPDTQLGSH 694 >gi|289443283|ref|ZP_06433027.1| PPE family protein [Mycobacterium tuberculosis T46] gi|339631862|ref|YP_004723504.1| PPE family protein [Mycobacterium africanum GM041182] gi|289416202|gb|EFD13442.1| PPE family protein [Mycobacterium tuberculosis T46] gi|339331218|emb|CCC26901.1| PPE family protein [Mycobacterium africanum GM041182] Length=470 Score = 917 bits (2369), Expect = 0.0, Method: Compositional matrix adjust. Identities = 467/468 (99%), Positives = 468/468 (100%), Gaps = 0/468 (0%) Query 1 MDFGLQPPEITSGEMYLGPGAGPMLAAAVAWDGLAAELQSMAASYASIVEGMASESWLGP 60 MDFGLQPPEITSGEMYLGPGAGPMLAAAVAWDGLAAELQSMAASYASIVEGMASESWLGP Sbjct 1 MDFGLQPPEITSGEMYLGPGAGPMLAAAVAWDGLAAELQSMAASYASIVEGMASESWLGP 60 Query 61 SSAGMAAAAAPYVTWMSGTSAQAKAAADQARAAVVAYETAFAAVVPPPQIAANRSQLISL 120 SSAGMAAAAAPYVTWMSGTSAQAKAAADQARAAVVAYETAFAAVVPPPQIAANRSQLISL Sbjct 61 SSAGMAAAAAPYVTWMSGTSAQAKAAADQARAAVVAYETAFAAVVPPPQIAANRSQLISL 120 Query 121 VATNIFGQNTAAIAATEAEYGEMWAQDTMAMFGYASSSATASRLTPFTAPPQTTNPSGLA 180 VATNIFGQNTAAIAATEAEYGEMWAQDTMAMFGYASSSATASRLTPFTAPPQTTNPSGLA Sbjct 121 VATNIFGQNTAAIAATEAEYGEMWAQDTMAMFGYASSSATASRLTPFTAPPQTTNPSGLA 180 Query 181 GQAAATGQATALASGTNAVTTALSSAAAQFPFDIIPTLLQGLATLSTQYTQLMGQLINAI 240 GQAAATGQATALASGTNAVTTALSSAAAQFPFDIIPTLLQGLATLSTQYTQLMGQLINAI Sbjct 181 GQAAATGQATALASGTNAVTTALSSAAAQFPFDIIPTLLQGLATLSTQYTQLMGQLINAI 240 Query 241 FGPTGATTYQNVFVTAANVTKFSTWANDAMSAPNLGMTEFKVFWQPPPAPEIPKSSLGAG 300 FGPTGATTYQN+FVTAANVTKFSTWANDAMSAPNLGMTEFKVFWQPPPAPEIPKSSLGAG Sbjct 241 FGPTGATTYQNLFVTAANVTKFSTWANDAMSAPNLGMTEFKVFWQPPPAPEIPKSSLGAG 300 Query 301 LGLRSGLSAGLAHAASAGLGQANLVGDLSVPPSWASATPAVRLVANTLPATSLAAAPATQ 360 LGLRSGLSAGLAHAASAGLGQANLVGDLSVPPSWASATPAVRLVANTLPATSLAAAPATQ Sbjct 301 LGLRSGLSAGLAHAASAGLGQANLVGDLSVPPSWASATPAVRLVANTLPATSLAAAPATQ 360 Query 361 IPANLLGQMALGSMTGGALGAAAPAIYTGSGARARANGGTPSAEPVKLEAVIAQLQKQPD 420 IPANLLGQMALGSMTGGALGAAAPAIYTGSGARARANGGTPSAEPVKLEAVIAQLQKQPD Sbjct 361 IPANLLGQMALGSMTGGALGAAAPAIYTGSGARARANGGTPSAEPVKLEAVIAQLQKQPD 420 Query 421 AVRHWNVDKADLDGLLDRLSKQPGIHAVHVSNGDKPKVALPDTQLGSH 468 AVRHWNVDKADLDGLLDRLSKQPGIHAVHVSNGDKPKVALPDTQLGSH Sbjct 421 AVRHWNVDKADLDGLLDRLSKQPGIHAVHVSNGDKPKVALPDTQLGSH 468 >gi|340626818|ref|YP_004745270.1| PPE family protein [Mycobacterium canettii CIPT 140010059] gi|340005008|emb|CCC44157.1| PPE family protein [Mycobacterium canettii CIPT 140010059] Length=470 Score = 915 bits (2365), Expect = 0.0, Method: Compositional matrix adjust. Identities = 466/468 (99%), Positives = 467/468 (99%), Gaps = 0/468 (0%) Query 1 MDFGLQPPEITSGEMYLGPGAGPMLAAAVAWDGLAAELQSMAASYASIVEGMASESWLGP 60 MDFGLQPPEITSGEMYLGPGAGPMLAAAVAWDGLAAELQSMAASYASIVEGMASESWLGP Sbjct 1 MDFGLQPPEITSGEMYLGPGAGPMLAAAVAWDGLAAELQSMAASYASIVEGMASESWLGP 60 Query 61 SSAGMAAAAAPYVTWMSGTSAQAKAAADQARAAVVAYETAFAAVVPPPQIAANRSQLISL 120 SSAGMAAAAAPYVTWMSGTSAQAKAAADQARAAVVAYETAFAAVVPPPQIAANRSQLISL Sbjct 61 SSAGMAAAAAPYVTWMSGTSAQAKAAADQARAAVVAYETAFAAVVPPPQIAANRSQLISL 120 Query 121 VATNIFGQNTAAIAATEAEYGEMWAQDTMAMFGYASSSATASRLTPFTAPPQTTNPSGLA 180 VATNIFGQNTAAIAATEAEYGEMWAQDTMAMFGYASSSATASRLTPFT PPQTTNPSGLA Sbjct 121 VATNIFGQNTAAIAATEAEYGEMWAQDTMAMFGYASSSATASRLTPFTVPPQTTNPSGLA 180 Query 181 GQAAATGQATALASGTNAVTTALSSAAAQFPFDIIPTLLQGLATLSTQYTQLMGQLINAI 240 GQAAATGQATALASGTNAVTTALSSAAAQFPFDIIPTLLQGLATLSTQYTQLMGQLINAI Sbjct 181 GQAAATGQATALASGTNAVTTALSSAAAQFPFDIIPTLLQGLATLSTQYTQLMGQLINAI 240 Query 241 FGPTGATTYQNVFVTAANVTKFSTWANDAMSAPNLGMTEFKVFWQPPPAPEIPKSSLGAG 300 FGPTGATTYQN+FVTAANVTKFSTWANDAMSAPNLGMTEFKVFWQPPPAPEIPKSSLGAG Sbjct 241 FGPTGATTYQNLFVTAANVTKFSTWANDAMSAPNLGMTEFKVFWQPPPAPEIPKSSLGAG 300 Query 301 LGLRSGLSAGLAHAASAGLGQANLVGDLSVPPSWASATPAVRLVANTLPATSLAAAPATQ 360 LGLRSGLSAGLAHAASAGLGQANLVGDLSVPPSWASATPAVRLVANTLPATSLAAAPATQ Sbjct 301 LGLRSGLSAGLAHAASAGLGQANLVGDLSVPPSWASATPAVRLVANTLPATSLAAAPATQ 360 Query 361 IPANLLGQMALGSMTGGALGAAAPAIYTGSGARARANGGTPSAEPVKLEAVIAQLQKQPD 420 IPANLLGQMALGSMTGGALGAAAPAIYTGSGARARANGGTPSAEPVKLEAVIAQLQKQPD Sbjct 361 IPANLLGQMALGSMTGGALGAAAPAIYTGSGARARANGGTPSAEPVKLEAVIAQLQKQPD 420 Query 421 AVRHWNVDKADLDGLLDRLSKQPGIHAVHVSNGDKPKVALPDTQLGSH 468 AVRHWNVDKADLDGLLDRLSKQPGIHAVHVSNGDKPKVALPDTQLGSH Sbjct 421 AVRHWNVDKADLDGLLDRLSKQPGIHAVHVSNGDKPKVALPDTQLGSH 468 >gi|289574486|ref|ZP_06454713.1| PPE family protein [Mycobacterium tuberculosis K85] gi|289538917|gb|EFD43495.1| PPE family protein [Mycobacterium tuberculosis K85] Length=470 Score = 914 bits (2363), Expect = 0.0, Method: Compositional matrix adjust. Identities = 466/468 (99%), Positives = 467/468 (99%), Gaps = 0/468 (0%) Query 1 MDFGLQPPEITSGEMYLGPGAGPMLAAAVAWDGLAAELQSMAASYASIVEGMASESWLGP 60 MDFGLQPPEITSGEMYLGPGAGPMLAAAVAWDGLAAELQSMAASYASIVEGMASESWLGP Sbjct 1 MDFGLQPPEITSGEMYLGPGAGPMLAAAVAWDGLAAELQSMAASYASIVEGMASESWLGP 60 Query 61 SSAGMAAAAAPYVTWMSGTSAQAKAAADQARAAVVAYETAFAAVVPPPQIAANRSQLISL 120 SSAGMAAAAAPYVTWMSGTSAQAKAAADQARAAVVAYETAFAAVVPPPQIAANRSQLISL Sbjct 61 SSAGMAAAAAPYVTWMSGTSAQAKAAADQARAAVVAYETAFAAVVPPPQIAANRSQLISL 120 Query 121 VATNIFGQNTAAIAATEAEYGEMWAQDTMAMFGYASSSATASRLTPFTAPPQTTNPSGLA 180 VATNIFGQNTAAIAATEAEYGEMWAQDTMAMFGYASSSATASRLTPFTAPPQTTNPSGLA Sbjct 121 VATNIFGQNTAAIAATEAEYGEMWAQDTMAMFGYASSSATASRLTPFTAPPQTTNPSGLA 180 Query 181 GQAAATGQATALASGTNAVTTALSSAAAQFPFDIIPTLLQGLATLSTQYTQLMGQLINAI 240 GQAAATGQATALASGTNAVTTALSSAAAQFPFDIIPTLLQGLATLSTQYTQLMGQLINAI Sbjct 181 GQAAATGQATALASGTNAVTTALSSAAAQFPFDIIPTLLQGLATLSTQYTQLMGQLINAI 240 Query 241 FGPTGATTYQNVFVTAANVTKFSTWANDAMSAPNLGMTEFKVFWQPPPAPEIPKSSLGAG 300 FGPTGATTYQN+FVTAANVTKFSTWANDAMSAPNLGMTEFKVFWQPPPAPEIPKSSLGAG Sbjct 241 FGPTGATTYQNLFVTAANVTKFSTWANDAMSAPNLGMTEFKVFWQPPPAPEIPKSSLGAG 300 Query 301 LGLRSGLSAGLAHAASAGLGQANLVGDLSVPPSWASATPAVRLVANTLPATSLAAAPATQ 360 LGLRSGLSAGLAHAASAGLGQANLVGDLSVPPSWASATPAVRLVANTLPATSLAAAPATQ Sbjct 301 LGLRSGLSAGLAHAASAGLGQANLVGDLSVPPSWASATPAVRLVANTLPATSLAAAPATQ 360 Query 361 IPANLLGQMALGSMTGGALGAAAPAIYTGSGARARANGGTPSAEPVKLEAVIAQLQKQPD 420 IPANLLGQMALGSMTGGALGAAAPAIYTGSGARARANG TPSAEPVKLEAVIAQLQKQPD Sbjct 361 IPANLLGQMALGSMTGGALGAAAPAIYTGSGARARANGRTPSAEPVKLEAVIAQLQKQPD 420 Query 421 AVRHWNVDKADLDGLLDRLSKQPGIHAVHVSNGDKPKVALPDTQLGSH 468 AVRHWNVDKADLDGLLDRLSKQPGIHAVHVSNGDKPKVALPDTQLGSH Sbjct 421 AVRHWNVDKADLDGLLDRLSKQPGIHAVHVSNGDKPKVALPDTQLGSH 468 >gi|289745759|ref|ZP_06505137.1| PPE family protein [Mycobacterium tuberculosis 02_1987] gi|289686287|gb|EFD53775.1| PPE family protein [Mycobacterium tuberculosis 02_1987] Length=436 Score = 814 bits (2102), Expect = 0.0, Method: Compositional matrix adjust. Identities = 415/419 (99%), Positives = 416/419 (99%), Gaps = 0/419 (0%) Query 50 EGMASESWLGPSSAGMAAAAAPYVTWMSGTSAQAKAAADQARAAVVAYETAFAAVVPPPQ 109 G ASESWLGPSSAGMAAAAAPYVTWMSGTSAQAKAAADQARAAVVAYE AFAAVVPPPQ Sbjct 18 RGHASESWLGPSSAGMAAAAAPYVTWMSGTSAQAKAAADQARAAVVAYENAFAAVVPPPQ 77 Query 110 IAANRSQLISLVATNIFGQNTAAIAATEAEYGEMWAQDTMAMFGYASSSATASRLTPFTA 169 IAANRSQLISLVATNIFGQNTAAIAATEAEYGEMWAQDTMAMFGYASSSATASRLTPFTA Sbjct 78 IAANRSQLISLVATNIFGQNTAAIAATEAEYGEMWAQDTMAMFGYASSSATASRLTPFTA 137 Query 170 PPQTTNPSGLAGQAAATGQATALASGTNAVTTALSSAAAQFPFDIIPTLLQGLATLSTQY 229 PPQTTNPSGLAGQAAATGQATALASGTNAVTTALSSAAAQFPFDIIPTLLQGLATLSTQY Sbjct 138 PPQTTNPSGLAGQAAATGQATALASGTNAVTTALSSAAAQFPFDIIPTLLQGLATLSTQY 197 Query 230 TQLMGQLINAIFGPTGATTYQNVFVTAANVTKFSTWANDAMSAPNLGMTEFKVFWQPPPA 289 TQLMGQLINAIFGPTGATTYQN+FVTAANVTKFSTWANDAMSAPNLGMTEFKVFWQPPPA Sbjct 198 TQLMGQLINAIFGPTGATTYQNLFVTAANVTKFSTWANDAMSAPNLGMTEFKVFWQPPPA 257 Query 290 PEIPKSSLGAGLGLRSGLSAGLAHAASAGLGQANLVGDLSVPPSWASATPAVRLVANTLP 349 PEIPKSSLGAGLGLRSGLSAGLAHAASAGLGQANLVGDLSVPPSWASATPAVRLVANTLP Sbjct 258 PEIPKSSLGAGLGLRSGLSAGLAHAASAGLGQANLVGDLSVPPSWASATPAVRLVANTLP 317 Query 350 ATSLAAAPATQIPANLLGQMALGSMTGGALGAAAPAIYTGSGARARANGGTPSAEPVKLE 409 ATSLAAAPATQIPANLLGQMALGSMTGGALGAAAPAIYTGSGARARANGGTPSAEPVKLE Sbjct 318 ATSLAAAPATQIPANLLGQMALGSMTGGALGAAAPAIYTGSGARARANGGTPSAEPVKLE 377 Query 410 AVIAQLQKQPDAVRHWNVDKADLDGLLDRLSKQPGIHAVHVSNGDKPKVALPDTQLGSH 468 AVIAQLQKQPDAVRHWNVDKADLDGLLDRLSKQPGIHAVHVSNGDKPKVALPDTQLGSH Sbjct 378 AVIAQLQKQPDAVRHWNVDKADLDGLLDRLSKQPGIHAVHVSNGDKPKVALPDTQLGSH 436 >gi|41407620|ref|NP_960456.1| hypothetical protein MAP1522 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41395973|gb|AAS03839.1| hypothetical protein MAP_1522 [Mycobacterium avium subsp. paratuberculosis K-10] gi|336457572|gb|EGO36577.1| PPE-repeat containing protein [Mycobacterium avium subsp. paratuberculosis S397] Length=461 Score = 432 bits (1112), Expect = 5e-119, Method: Compositional matrix adjust. Identities = 287/463 (62%), Positives = 350/463 (76%), Gaps = 12/463 (2%) Query 1 MDFGLQPPEITSGEMYLGPGAGPMLAAAVAWDGLAAELQSMAASYASIVEGMASESWLGP 60 M+F LQPPEITS ++Y GPGAGPML AA AWD LAAELQS A+SYA++V G+A E+W GP Sbjct 1 MNFALQPPEITSAQLYTGPGAGPMLTAAAAWDALAAELQSAASSYAAVVNGLADEAWAGP 60 Query 61 SSAGMAAAAAPYVTWMSGTSAQAKAAADQARAAVVAYETAFAAVVPPPQIAANRSQLISL 120 S+A MAAAAAPYV W+S TSAQA+ AA+QA AA A+E+AFAAVVPP ++A NR++L L Sbjct 61 SAAAMAAAAAPYVAWLSATSAQARTAAEQATAAASAFESAFAAVVPPAEVATNRARLAML 120 Query 121 VATNIFGQNTAAIAATEAEYGEMWAQDTMAMFGYASSSATASRLTPFTAPPQTTNPSGLA 180 +A+N+FGQN+AAIAA EAEYG+MWAQD AMFGYAS+SA A+RL PFT PP+TTN +G+A Sbjct 121 LASNVFGQNSAAIAAAEAEYGQMWAQDAAAMFGYASASAAATRLAPFTEPPKTTNDAGIA 180 Query 181 GQAAATGQATALASGTNAVTTALSSAAAQFPFDIIPTLLQGLATLSTQYTQLMGQLINAI 240 QAAA G+AT +GT +++ A P II LL+ L S Y Q++N + Sbjct 181 AQAAALGEATGRGAGT------VAADATAPPSGIISQLLEALGNASRGYMDFWDQVLNTL 234 Query 241 FG-PTGATTYQNVFVTAANVTKFSTWANDAMSAPNLGMTEFKVFWQ-PPPAPEIPKSSLG 298 G P TT+QN F A++ +FST AND+MS NL MTEFK+F++ P +IPKS+LG Sbjct 235 TGSPLAGTTWQNTFGILADIGRFSTVANDSMSPINLAMTEFKMFYKLPVEGLDIPKSALG 294 Query 299 AGLGLRSGLSAGLAHAASAGLGQANLVGDLSVPPSWASATPAVRLVANTLPATSLAAAPA 358 AGLGLRS AGL A S G+G+AN VG LSVPP+WASATPA+RL + PAT+ AAAPA Sbjct 295 AGLGLRSA-GAGLTGAVSVGVGEANTVGRLSVPPTWASATPAIRLASGLTPATAAAAAPA 353 Query 359 TQIPANLLGQMALGSMTGGALGAAAPAIYTGSGARARANGGTPSAEPVKLEAVIAQLQKQ 418 IPA LLGQMALGS+TGGALGA AP + +G G R RA AEPVKL+ VIA+LQ+Q Sbjct 354 AGIPAGLLGQMALGSVTGGALGAVAPHVGSGRGVRVRA---AKPAEPVKLDDVIAKLQRQ 410 Query 419 PDAVRHWNVDKADLDGLLDRLSKQPGIHAVHVSNGDKPKVALP 461 P+AV+HWNVDKA LD LLDRLSK+PGIHAVHVS+G KP V LP Sbjct 411 PEAVQHWNVDKAGLDDLLDRLSKKPGIHAVHVSSGGKPTVTLP 453 >gi|212595990|gb|ACJ35542.1| PPE17 [Mycobacterium avium subsp. avium] Length=461 Score = 426 bits (1094), Expect = 5e-117, Method: Compositional matrix adjust. Identities = 289/464 (63%), Positives = 347/464 (75%), Gaps = 12/464 (2%) Query 1 MDFGLQPPEITSGEMYLGPGAGPMLAAAVAWDGLAAELQSMAASYASIVEGMASESWLGP 60 M+F LQPPEITS ++Y GPGAGPML AA AWD LAAELQS A+SYA++V G+A E+W GP Sbjct 1 MNFALQPPEITSAQLYTGPGAGPMLTAAAAWDALAAELQSAASSYAAVVNGLADEAWAGP 60 Query 61 SSAGMAAAAAPYVTWMSGTSAQAKAAADQARAAVVAYETAFAAVVPPPQIAANRSQLISL 120 S+A MAAAAAPYV W+S SAQA+ AA+QA AA YE+AFAAVVPP +IA NR++L L Sbjct 61 SAAAMAAAAAPYVAWLSAASAQARTAAEQATAAASVYESAFAAVVPPAEIATNRARLTML 120 Query 121 VATNIFGQNTAAIAATEAEYGEMWAQDTMAMFGYASSSATASRLTPFTAPPQTTNPSGLA 180 +A+N+FGQN+AAIAA EAEYG+MWAQD AMFGYAS+SA A+RL PFT PP+TTN +G+A Sbjct 121 LASNVFGQNSAAIAAAEAEYGQMWAQDAAAMFGYASASAAATRLAPFTEPPKTTNDAGIA 180 Query 181 GQAAATGQATALASGTNAVTTALSSAAAQFPFDIIPTLLQGLATLSTQYTQLMGQLINAI 240 QAAA G+AT L +GT A P II LL+ L S Y Q++N + Sbjct 181 AQAAALGEATGLGAGTAAADATAP------PSGIISQLLEALGNASRGYMDFWDQVLNTL 234 Query 241 FG-PTGATTYQNVFVTAANVTKFSTWANDAMSAPNLGMTEFKVFWQ-PPPAPEIPKSSLG 298 G P TT+QN F A++ +FST AND+MS NL MTEFK+F++ P +IPKS+LG Sbjct 235 TGSPLAGTTWQNTFGILADIGRFSTVANDSMSPINLAMTEFKMFYKLPVEGLDIPKSALG 294 Query 299 AGLGLRSGLSAGLAHAASAGLGQANLVGDLSVPPSWASATPAVRLVANTLPATSLAAAPA 358 AGLGLRS AGL A S G+G+AN VG LSVPP+WASATPA+RL + PAT+ AAAPA Sbjct 295 AGLGLRSA-GAGLTGAVSVGVGEANSVGRLSVPPTWASATPAIRLASGLAPATAAAAAPA 353 Query 359 TQIPANLLGQMALGSMTGGALGAAAPAIYTGSGARARANGGTPSAEPVKLEAVIAQLQKQ 418 IPA LLGQMALGS+TGGALGA AP + +G G R RA AEPVKL+ VIA+LQ+Q Sbjct 354 AGIPAGLLGQMALGSVTGGALGAVAPHVGSGRGVRVRA---AKPAEPVKLDDVIAKLQRQ 410 Query 419 PDAVRHWNVDKADLDGLLDRLSKQPGIHAVHVSNGDKPKVALPD 462 P+AV+HWNVDKA LD LLDRLSK+PGIHAVHVS+G KP V LPD Sbjct 411 PEAVQHWNVDKAGLDDLLDRLSKKPGIHAVHVSSGGKPTVTLPD 454 >gi|118462708|ref|YP_882091.1| PPE family protein [Mycobacterium avium 104] gi|118163995|gb|ABK64892.1| ppe family protein [Mycobacterium avium 104] Length=461 Score = 417 bits (1071), Expect = 2e-114, Method: Compositional matrix adjust. Identities = 287/464 (62%), Positives = 346/464 (75%), Gaps = 12/464 (2%) Query 1 MDFGLQPPEITSGEMYLGPGAGPMLAAAVAWDGLAAELQSMAASYASIVEGMASESWLGP 60 M+F LQPPEITS ++Y GPGAGPML AA AWD LAAELQS A+SYA++V G+A E+W GP Sbjct 1 MNFALQPPEITSAQLYTGPGAGPMLTAAAAWDALAAELQSAASSYAAVVNGLADEAWAGP 60 Query 61 SSAGMAAAAAPYVTWMSGTSAQAKAAADQARAAVVAYETAFAAVVPPPQIAANRSQLISL 120 S+A MAAAAAPYV W+S TSAQA+ AA+QA AA A+E+AFAAVVPP +IA NR++L L Sbjct 61 SAAAMAAAAAPYVAWLSATSAQARTAAEQATAAASAFESAFAAVVPPAEIATNRARLAML 120 Query 121 VATNIFGQNTAAIAATEAEYGEMWAQDTMAMFGYASSSATASRLTPFTAPPQTTNPSGLA 180 A+N+FGQN+AAIAA EAEYG+MWAQD AMFGYAS+SA A+RL PFT PP+TTN +G+A Sbjct 121 SASNVFGQNSAAIAAAEAEYGQMWAQDAAAMFGYASASAAATRLAPFTEPPKTTNDAGIA 180 Query 181 GQAAATGQATALASGTNAVTTALSSAAAQFPFDIIPTLLQGLATLSTQYTQLMGQLINAI 240 QAAA G+AT ++ A P II LL+ L S Y Q++N + Sbjct 181 AQAAALGEATG------RGAGTAAADATAPPSGIISQLLEALGNASRGYMDFWDQVLNTL 234 Query 241 FG-PTGATTYQNVFVTAANVTKFSTWANDAMSAPNLGMTEFKVFWQ-PPPAPEIPKSSLG 298 G P TT+QN F A++ +FST AND+MS NL MTEFK+F++ P +IPKS+LG Sbjct 235 TGSPLAGTTWQNTFGILADIGRFSTVANDSMSPINLAMTEFKMFYKLPVEGLDIPKSALG 294 Query 299 AGLGLRSGLSAGLAHAASAGLGQANLVGDLSVPPSWASATPAVRLVANTLPATSLAAAPA 358 AGLGLRS AGL A S G+G+AN VG LSVPP+WASATPA+RL + PAT+ AAAPA Sbjct 295 AGLGLRSA-GAGLTGAVSVGVGEANTVGRLSVPPTWASATPAIRLASGLAPATAAAAAPA 353 Query 359 TQIPANLLGQMALGSMTGGALGAAAPAIYTGSGARARANGGTPSAEPVKLEAVIAQLQKQ 418 IPA LLGQMALGS+TGGALGA AP + +G G R RA AEPVKL+ VIA+LQ+Q Sbjct 354 AGIPAGLLGQMALGSVTGGALGAVAPHVGSGRGVRVRA---AKPAEPVKLDDVIAKLQRQ 410 Query 419 PDAVRHWNVDKADLDGLLDRLSKQPGIHAVHVSNGDKPKVALPD 462 P+AV+HWNVDKA LD LLDRLSK+PGIHAVHVS+G KP V LPD Sbjct 411 PEAVQHWNVDKAGLDDLLDRLSKKPGIHAVHVSSGGKPTVTLPD 454 >gi|212596535|gb|ACJ35586.1| PPE17 [Mycobacterium intracellulare ATCC 13950] Length=467 Score = 416 bits (1068), Expect = 5e-114, Method: Compositional matrix adjust. Identities = 300/469 (64%), Positives = 360/469 (77%), Gaps = 8/469 (1%) Query 1 MDFGLQPPEITSGEMYLGPGAGPMLAAAVAWDGLAAELQSMAASYASIVEGMASESWLGP 60 M+F +QPPEITSG+MY GPGAGPMLAAA AWD LAAELQS A+SY +IVEG+A+E+W GP Sbjct 1 MNFAVQPPEITSGQMYTGPGAGPMLAAAAAWDALAAELQSTASSYGAIVEGLANEAWAGP 60 Query 61 SSAGMAAAAAPYVTWMSGTSAQAKAAADQARAAVVAYETAFAAVVPPPQIAANRSQLISL 120 S+ MAAAAA YV WMS TSAQAK AA QA AA AYE+AFAAVVPP +IAANR +L +L Sbjct 61 SAVAMAAAAAQYVAWMSETSAQAKTAAVQATAAAGAYESAFAAVVPPTEIAANRVRLATL 120 Query 121 VATNIFGQNTAAIAATEAEYGEMWAQDTMAMFGYASSSATASRLTPFTAPPQTTNPSGLA 180 +ATN FGQNTAAIAATEAEY EMWAQD AM+ YA +SA A+RL PFT PPQTTN +G+A Sbjct 121 LATNAFGQNTAAIAATEAEYAEMWAQDAAAMYAYAGASAAATRLAPFTEPPQTTNETGIA 180 Query 181 GQAAATGQATALASGTNAVTTALSSAAAQFPFDIIPTLLQGLATLSTQYTQLMGQLINAI 240 QAAA G+AT +ASGT A T A++ P I LL+ + S Y + Q++N + Sbjct 181 AQAAALGEATGVASGTAAATDAVAP-----PSGIFSDLLEAIGNASRGYMEFWDQVLNTL 235 Query 241 FG-PTGATTYQNVFVTAANVTKFSTWANDAMSAPNLGMTEFKVFWQ-PPPAPEIPKSSLG 298 G P TT+QN F A++ +FST AND+MS NL MTEFK+F+ P +IPKS+LG Sbjct 236 TGSPLAGTTWQNTFGILADIGRFSTVANDSMSPINLAMTEFKMFYNLPVEGLDIPKSALG 295 Query 299 AGLGLRSGLSAGLAHAASAGLGQANLVGDLSVPPSWASATPAVRLVANTLPATSLAAAPA 358 AGLG+RS AGL A SAG+G+AN+VG LSVPP+WASATPA+RL + P+ +AAAPA Sbjct 296 AGLGMRSA-GAGLTSAVSAGMGEANVVGKLSVPPAWASATPAIRLASGLAPSAGIAAAPA 354 Query 359 TQIPANLLGQMALGSMTGGALGAAAPAIYTGSGARARANGGTPSAEPVKLEAVIAQLQKQ 418 IP +LLGQMALGS+TGGALGA P + +G G RARA G T +AEPVKL+ VIA+LQKQ Sbjct 355 AGIPGSLLGQMALGSLTGGALGAVTPQVVSGGGVRARAGGATKAAEPVKLDDVIAKLQKQ 414 Query 419 PDAVRHWNVDKADLDGLLDRLSKQPGIHAVHVSNGDKPKVALPDTQLGS 467 P+AV+HWNVDKA LD LLD+LSK+PGIHAVHVS+GDKPKV LPD +LG Sbjct 415 PEAVQHWNVDKAGLDDLLDQLSKKPGIHAVHVSSGDKPKVTLPDARLGK 463 >gi|254823257|ref|ZP_05228258.1| hypothetical protein MintA_25229 [Mycobacterium intracellulare ATCC 13950] Length=444 Score = 380 bits (975), Expect = 4e-103, Method: Compositional matrix adjust. Identities = 269/431 (63%), Positives = 326/431 (76%), Gaps = 8/431 (1%) Query 39 QSMAASYASIVEGMASESWLGPSSAGMAAAAAPYVTWMSGTSAQAKAAADQARAAVVAYE 98 QS A+SY +IVEG+A+E+W GPS+ MAAAAA YV WMS TSAQAK AA QA AA AYE Sbjct 16 QSTASSYGAIVEGLANEAWAGPSAVAMAAAAAQYVAWMSETSAQAKTAAVQATAAAGAYE 75 Query 99 TAFAAVVPPPQIAANRSQLISLVATNIFGQNTAAIAATEAEYGEMWAQDTMAMFGYASSS 158 +AFAAVVPP +IAANR +L +L+ATN FGQNTAAIAATEAEY EMWAQD AM+ YA +S Sbjct 76 SAFAAVVPPTEIAANRVRLATLLATNAFGQNTAAIAATEAEYAEMWAQDAAAMYAYAGAS 135 Query 159 ATASRLTPFTAPPQTTNPSGLAGQAAATGQATALASGTNAVTTALSSAAAQFPFDIIPTL 218 A A+RL PFT PPQTTN +G+A QAAA G+AT +ASGT A T A++ P I L Sbjct 136 AAATRLAPFTEPPQTTNETGIAAQAAALGEATGVASGTAAATDAVAP-----PSGIFSDL 190 Query 219 LQGLATLSTQYTQLMGQLINAIFG-PTGATTYQNVFVTAANVTKFSTWANDAMSAPNLGM 277 L+ + S Y + Q++N + G P TT+QN F A++ +FST AND+MS NL M Sbjct 191 LEAIGNASRGYMEFWDQVLNTLTGSPLAGTTWQNTFGILADIGRFSTVANDSMSPINLAM 250 Query 278 TEFKVFWQ-PPPAPEIPKSSLGAGLGLRSGLSAGLAHAASAGLGQANLVGDLSVPPSWAS 336 TEFK+F+ P +IPKS+LGAGLG+RS AGL A SAG+G+AN+VG LSVPP+WAS Sbjct 251 TEFKMFYNLPVEGLDIPKSALGAGLGMRSA-GAGLTSAVSAGMGEANVVGKLSVPPAWAS 309 Query 337 ATPAVRLVANTLPATSLAAAPATQIPANLLGQMALGSMTGGALGAAAPAIYTGSGARARA 396 ATPA+RL + P+ +AAAPA IP +LLGQMALGS+TGGALGA P + +G G RARA Sbjct 310 ATPAIRLASGLAPSAGIAAAPAAGIPGSLLGQMALGSLTGGALGAVTPQVVSGGGVRARA 369 Query 397 NGGTPSAEPVKLEAVIAQLQKQPDAVRHWNVDKADLDGLLDRLSKQPGIHAVHVSNGDKP 456 G T +AEPVKL+ VIA+LQKQP+AV+HWNVDKA LD LLD+LSK+PGIHAVHVS+GDKP Sbjct 370 GGATKAAEPVKLDDVIAKLQKQPEAVQHWNVDKAGLDDLLDQLSKKPGIHAVHVSSGDKP 429 Query 457 KVALPDTQLGS 467 KV LPD +LG Sbjct 430 KVTLPDARLGK 440 >gi|31792998|ref|NP_855491.1| hypothetical protein Mb1838 [Mycobacterium bovis AF2122/97] gi|121637711|ref|YP_977934.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224990195|ref|YP_002644882.1| PPE Family protein [Mycobacterium bovis BCG str. Tokyo 172] gi|31618589|emb|CAD94541.1| PPE FAMILY PROTEIN [FIRST PART] [Mycobacterium bovis AF2122/97] gi|121493358|emb|CAL71829.1| PPE Family protein [first part] [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224773308|dbj|BAH26114.1| PPE Family protein [Mycobacterium bovis BCG str. Tokyo 172] gi|341601738|emb|CCC64411.1| PPE Family protein [first part] [Mycobacterium bovis BCG str. Moreau RDJ] Length=187 Score = 362 bits (928), Expect = 1e-97, Method: Compositional matrix adjust. Identities = 187/187 (100%), Positives = 187/187 (100%), Gaps = 0/187 (0%) Query 1 MDFGLQPPEITSGEMYLGPGAGPMLAAAVAWDGLAAELQSMAASYASIVEGMASESWLGP 60 MDFGLQPPEITSGEMYLGPGAGPMLAAAVAWDGLAAELQSMAASYASIVEGMASESWLGP Sbjct 1 MDFGLQPPEITSGEMYLGPGAGPMLAAAVAWDGLAAELQSMAASYASIVEGMASESWLGP 60 Query 61 SSAGMAAAAAPYVTWMSGTSAQAKAAADQARAAVVAYETAFAAVVPPPQIAANRSQLISL 120 SSAGMAAAAAPYVTWMSGTSAQAKAAADQARAAVVAYETAFAAVVPPPQIAANRSQLISL Sbjct 61 SSAGMAAAAAPYVTWMSGTSAQAKAAADQARAAVVAYETAFAAVVPPPQIAANRSQLISL 120 Query 121 VATNIFGQNTAAIAATEAEYGEMWAQDTMAMFGYASSSATASRLTPFTAPPQTTNPSGLA 180 VATNIFGQNTAAIAATEAEYGEMWAQDTMAMFGYASSSATASRLTPFTAPPQTTNPSGLA Sbjct 121 VATNIFGQNTAAIAATEAEYGEMWAQDTMAMFGYASSSATASRLTPFTAPPQTTNPSGLA 180 Query 181 GQAAATG 187 GQAAATG Sbjct 181 GQAAATG 187 >gi|254775380|ref|ZP_05216896.1| hypothetical protein MaviaA2_12026 [Mycobacterium avium subsp. avium ATCC 25291] Length=375 Score = 357 bits (915), Expect = 3e-96, Method: Compositional matrix adjust. Identities = 229/378 (61%), Positives = 276/378 (74%), Gaps = 12/378 (3%) Query 87 ADQARAAVVAYETAFAAVVPPPQIAANRSQLISLVATNIFGQNTAAIAATEAEYGEMWAQ 146 A+QA AA YE+AFAAVVPP +IA NR++L L+A+N+FGQN+AAIAA EAEYG+MWAQ Sbjct 1 AEQATAAASVYESAFAAVVPPAEIATNRARLTMLLASNVFGQNSAAIAAAEAEYGQMWAQ 60 Query 147 DTMAMFGYASSSATASRLTPFTAPPQTTNPSGLAGQAAATGQATALASGTNAVTTALSSA 206 D AMFGYAS+SA A+RL PFT PP+TTN +G+A QAAA G+AT L +GT A Sbjct 61 DAAAMFGYASASAAATRLAPFTEPPKTTNDAGIAAQAAALGEATGLGAGTAAADATAP-- 118 Query 207 AAQFPFDIIPTLLQGLATLSTQYTQLMGQLINAIFG-PTGATTYQNVFVTAANVTKFSTW 265 P II LL+ L S Y Q++N + G P TT+QN F A++ +FST Sbjct 119 ----PSGIISQLLEALGNASRGYMDFWDQVLNTLTGSPLAGTTWQNTFGILADIGRFSTV 174 Query 266 ANDAMSAPNLGMTEFKVFWQ-PPPAPEIPKSSLGAGLGLRSGLSAGLAHAASAGLGQANL 324 AND+MS NL MTEFK+F++ P +IPKS+LGAGLGLRS AGL A S G+G+AN Sbjct 175 ANDSMSPINLAMTEFKMFYKLPVEGLDIPKSALGAGLGLRSA-GAGLTGAVSVGVGEANS 233 Query 325 VGDLSVPPSWASATPAVRLVANTLPATSLAAAPATQIPANLLGQMALGSMTGGALGAAAP 384 VG LSVPP+WASATPA+RL + PAT+ AAAPA IPA LLGQMALGS+TGGALGA AP Sbjct 234 VGRLSVPPTWASATPAIRLASGLAPATAAAAAPAAGIPAGLLGQMALGSVTGGALGAVAP 293 Query 385 AIYTGSGARARANGGTPSAEPVKLEAVIAQLQKQPDAVRHWNVDKADLDGLLDRLSKQPG 444 + +G G R RA AEPVKL+ VIA+LQ+QP+AV+HWNVDKA LD LLDRLSK+PG Sbjct 294 HVGSGRGVRVRA---AKPAEPVKLDDVIAKLQRQPEAVQHWNVDKAGLDDLLDRLSKKPG 350 Query 445 IHAVHVSNGDKPKVALPD 462 IHAVHVS+G KP V LPD Sbjct 351 IHAVHVSSGGKPTVTLPD 368 >gi|31792990|ref|NP_855483.1| PPE family protein [Mycobacterium bovis AF2122/97] gi|57116917|ref|YP_177841.1| PPE family protein [Mycobacterium tuberculosis H37Rv] gi|121637703|ref|YP_977926.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] 62 more sequence titles Length=463 Score = 325 bits (833), Expect = 9e-87, Method: Compositional matrix adjust. Identities = 235/471 (50%), Positives = 299/471 (64%), Gaps = 27/471 (5%) Query 1 MDFGLQPPEITSGEMYLGPGAGPMLAAAVAWDGLAAELQSMAASYASIVEGMASESWLGP 60 MDFG+ PPEI SG MY GPG+GPMLAAA AWDGLA ELQS AA Y S++ + + W G Sbjct 1 MDFGVLPPEINSGRMYAGPGSGPMLAAAAAWDGLATELQSTAADYGSVIS-VLTGVWSGQ 59 Query 61 SSAGMAAAAAPYVTWMSGTSAQAKAAADQARAAVVAYETAFAAVVPPPQIAANRSQLISL 120 SS MAAAAAPYV WMS T+A A+ AA QA AA AYE AFAA VPPP +AANR++L L Sbjct 60 SSGTMAAAAAPYVAWMSATAALAREAAAQASAAAAAYEAAFAATVPPPVVAANRAELAVL 119 Query 121 VATNIFGQNTAAIAATEAEYGEMWAQDTMAMFGYASSSATASRLTPFTAPPQTTNPSGLA 180 ATNIFGQNT AIAA EA Y EMWAQD AM+GYA SS+ A+++TPF APP TTN +GLA Sbjct 120 AATNIFGQNTGAIAAAEARYAEMWAQDAAAMYGYAGSSSVATQVTPFAAPPPTTNAAGLA 179 Query 181 GQAAATGQATALASGTNAVTTALSSAAAQFPFDIIPTLLQGLATLSTQYTQLMGQLINAI 240 Q A QA ++G NA + ++ +L+ LAT T Y + + L+NA+ Sbjct 180 TQGVAVAQAVGASAG-NARS-------------LVSEVLEFLATAGTNYNKTVASLMNAV 225 Query 241 FG-PTGATTYQNVFVTAANVTKFSTWANDAMSAPNLGMTEFKVFWQP--PPAPE-IPKSS 296 G P ++ Y ++ +K AND + + GM +F+ F+ P P P+ IPKS+ Sbjct 226 TGVPYASSVYNSMLGLGFAESKMVLPANDTVISTIFGMVQFQKFFNPVTPFNPDLIPKSA 285 Query 297 LGAGLGLRSGLSAGL---AHAASAGLGQANLVGDLSVPPSWASATPAVRLVANTLPATSL 353 LGAGLGLRS +S+GL A A SAG QA VG +SVPPSWA+ATPA+R VA +T L Sbjct 286 LGAGLGLRSAISSGLGSTAPAISAGASQAGSVGGMSVPPSWAAATPAIRTVAAVFSSTGL 345 Query 354 AAAPATQI-PANLLGQMALGSM---TGGALGAAAPAIYTGSG-ARARANGGTPSAEPVKL 408 A PA I +LL QMAL S+ G A A + G G A S P KL Sbjct 346 QAVPAAAISEGSLLSQMALASVAGGALGGAAARATGGFLGGGRVTAVKKSLKDSDSPDKL 405 Query 409 EAVIAQLQKQPDAVRHWNVDKADLDGLLDRLSKQPGIHAVHVSNGDKPKVA 459 V+A + ++P++V+HW+ D+ LD LL L K+PGIHAVH++ G+K ++A Sbjct 406 RRVVAHMMEKPESVQHWHTDEDGLDDLLAELKKKPGIHAVHMAGGNKAEIA 456 >gi|15841272|ref|NP_336309.1| PPE family protein [Mycobacterium tuberculosis CDC1551] gi|13881500|gb|AAK46123.1| PPE family protein [Mycobacterium tuberculosis CDC1551] gi|323719680|gb|EGB28801.1| PPE family protein [Mycobacterium tuberculosis CDC1551A] Length=463 Score = 324 bits (831), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 233/471 (50%), Positives = 299/471 (64%), Gaps = 27/471 (5%) Query 1 MDFGLQPPEITSGEMYLGPGAGPMLAAAVAWDGLAAELQSMAASYASIVEGMASESWLGP 60 MDFG+ PPEI SG MY GPG+GPMLAAA AWDGLA ELQS AA Y S++ + + W G Sbjct 1 MDFGVLPPEINSGRMYAGPGSGPMLAAAAAWDGLATELQSTAADYGSVIS-VLTGVWSGQ 59 Query 61 SSAGMAAAAAPYVTWMSGTSAQAKAAADQARAAVVAYETAFAAVVPPPQIAANRSQLISL 120 SS MAAAAAPYV WMS T+A A+ AA QA AA AYE AFAA VPPP +AANR++L L Sbjct 60 SSGTMAAAAAPYVAWMSATAALAREAAAQASAAAAAYEAAFAATVPPPVVAANRAELAVL 119 Query 121 VATNIFGQNTAAIAATEAEYGEMWAQDTMAMFGYASSSATASRLTPFTAPPQTTNPSGLA 180 ATNIFGQNT AIAA EA Y EMWAQD AM+GYA SS+ A+++TPF APP TTN +GLA Sbjct 120 AATNIFGQNTGAIAAAEARYAEMWAQDAAAMYGYAGSSSVATQVTPFAAPPPTTNAAGLA 179 Query 181 GQAAATGQATALASGTNAVTTALSSAAAQFPFDIIPTLLQGLATLSTQYTQLMGQLINAI 240 Q A QA ++G NA + ++ +L+ LAT T Y + + L+NA+ Sbjct 180 TQGVAVAQAVGASAG-NARS-------------LVSEVLEFLATAGTNYNKTVASLMNAV 225 Query 241 FG-PTGATTYQNVFVTAANVTKFSTWANDAMSAPNLGMTEFKVFWQP--PPAPE-IPKSS 296 G P ++ Y ++ +K AND + + GM +F+ F+ P P P+ IPKS+ Sbjct 226 TGVPYASSVYNSMLGLGFAESKMVLPANDTVISTIFGMVQFQKFFNPVTPFNPDLIPKSA 285 Query 297 LGAGLGLRSGLSAGL---AHAASAGLGQANLVGDLSVPPSWASATPAVRLVANTLPATSL 353 LGAGLGLRS +S+GL A A SAG QA VG +SVPPSWA+ATPA+R VA +T L Sbjct 286 LGAGLGLRSAISSGLGSTAPAISAGASQAGSVGGMSVPPSWAAATPAIRTVAAVFSSTGL 345 Query 354 AAAPATQI-PANLLGQMALGSM---TGGALGAAAPAIYTGSGARARANGGTPSAE-PVKL 408 A PA I +LL QMAL S+ G A A + G G ++ P KL Sbjct 346 QAVPAAAISEGSLLSQMALASVAGGALGGAAARATGGFLGGGRVTAVKKSLKDSDLPDKL 405 Query 409 EAVIAQLQKQPDAVRHWNVDKADLDGLLDRLSKQPGIHAVHVSNGDKPKVA 459 V+A + ++P++V+HW+ D+ LD LL L K+PGIHAVH++ G+K ++A Sbjct 406 RRVVAHMMEKPESVQHWHTDEDGLDDLLAELKKKPGIHAVHMAGGNKAEIA 456 >gi|340626812|ref|YP_004745264.1| PPE family protein [Mycobacterium canettii CIPT 140010059] gi|340005002|emb|CCC44150.1| PPE family protein [Mycobacterium canettii CIPT 140010059] Length=463 Score = 323 bits (829), Expect = 3e-86, Method: Compositional matrix adjust. Identities = 235/471 (50%), Positives = 298/471 (64%), Gaps = 27/471 (5%) Query 1 MDFGLQPPEITSGEMYLGPGAGPMLAAAVAWDGLAAELQSMAASYASIVEGMASESWLGP 60 MDFG+ PPEI SG MY GPG+GPMLAAA AWDGLA ELQS AA Y S++ + + W G Sbjct 1 MDFGVLPPEINSGRMYAGPGSGPMLAAAAAWDGLATELQSTAADYGSVIS-VLTGVWSGQ 59 Query 61 SSAGMAAAAAPYVTWMSGTSAQAKAAADQARAAVVAYETAFAAVVPPPQIAANRSQLISL 120 SS MAAAAAPYV WMS T+A A+ AA QA AA AYE AFAA VPPP +AANR++L L Sbjct 60 SSGTMAAAAAPYVAWMSATAALAREAAAQASAAAAAYEAAFAATVPPPVVAANRAELAVL 119 Query 121 VATNIFGQNTAAIAATEAEYGEMWAQDTMAMFGYASSSATASRLTPFTAPPQTTNPSGLA 180 ATNIFGQNT AIAA EA Y EMWAQD AM+GYA SS+ A+++TPF APP TTN +GLA Sbjct 120 AATNIFGQNTGAIAAAEARYAEMWAQDAAAMYGYAGSSSVATQVTPFAAPPPTTNAAGLA 179 Query 181 GQAAATGQATALASGTNAVTTALSSAAAQFPFDIIPTLLQGLATLSTQYTQLMGQLINAI 240 Q A QA + G NA + ++ +L+ LAT T Y + + L+NA+ Sbjct 180 TQGVAVAQAVGASPG-NARS-------------LVSEVLEFLATAGTNYNKTVASLMNAV 225 Query 241 FG-PTGATTYQNVFVTAANVTKFSTWANDAMSAPNLGMTEFKVFWQP--PPAPE-IPKSS 296 G P ++ Y ++ +K AND + + GM +F+ F+ P P P+ IPKS+ Sbjct 226 TGVPYASSVYNSMLGLGFAESKMVLPANDTVISTIFGMVQFQKFFNPVTPFNPDLIPKSA 285 Query 297 LGAGLGLRSGLSAGL---AHAASAGLGQANLVGDLSVPPSWASATPAVRLVANTLPATSL 353 LGAGLGLRS +S+GL A A SAG QA VG +SVPPSWA+ATPA+R VA +T L Sbjct 286 LGAGLGLRSAISSGLGSTAPAISAGASQAGSVGGMSVPPSWAAATPAIRTVAAVFSSTGL 345 Query 354 AAAPATQI-PANLLGQMALGSM---TGGALGAAAPAIYTGSG-ARARANGGTPSAEPVKL 408 A PA I +LL QMAL S+ G A A + G G A S P KL Sbjct 346 QAVPAAAISEGSLLSQMALASVAGGALGGAAARATGGFLGGGRVTAVKKSLKDSDSPDKL 405 Query 409 EAVIAQLQKQPDAVRHWNVDKADLDGLLDRLSKQPGIHAVHVSNGDKPKVA 459 V+A + ++P++V+HW+ D+ LD LL L K+PGIHAVH++ G+K ++A Sbjct 406 RRVVAHMMEKPESVQHWHTDEDGLDDLLAELKKKPGIHAVHMAGGNKAEIA 456 >gi|339294739|gb|AEJ46850.1| PPE family protein [Mycobacterium tuberculosis CCDC5079] Length=463 Score = 322 bits (825), Expect = 9e-86, Method: Compositional matrix adjust. Identities = 234/471 (50%), Positives = 298/471 (64%), Gaps = 27/471 (5%) Query 1 MDFGLQPPEITSGEMYLGPGAGPMLAAAVAWDGLAAELQSMAASYASIVEGMASESWLGP 60 MDFG+ PPEI SG MY GPG+GPMLAAA AWDGLA ELQS AA Y S++ + + W G Sbjct 1 MDFGVLPPEINSGRMYAGPGSGPMLAAAAAWDGLATELQSTAADYGSVIS-VLTGVWSGQ 59 Query 61 SSAGMAAAAAPYVTWMSGTSAQAKAAADQARAAVVAYETAFAAVVPPPQIAANRSQLISL 120 SS MAAAAAPYV WMS T+A A+ AA QA AA AYE AFAA VPPP +AANR++L L Sbjct 60 SSGTMAAAAAPYVAWMSATAALAREAAAQASAAAAAYEAAFAATVPPPVVAANRAELAVL 119 Query 121 VATNIFGQNTAAIAATEAEYGEMWAQDTMAMFGYASSSATASRLTPFTAPPQTTNPSGLA 180 ATNIFGQNT AIAA EA Y EMWAQD AM+GYA SS+ A+++TPF APP TTN +GLA Sbjct 120 AATNIFGQNTGAIAAAEARYAEMWAQDAAAMYGYAGSSSVATQVTPFAAPPPTTNAAGLA 179 Query 181 GQAAATGQATALASGTNAVTTALSSAAAQFPFDIIPTLLQGLATLSTQYTQLMGQLINAI 240 Q A QA ++G NA + ++ +L+ LAT T Y + + L+NA+ Sbjct 180 TQGVAVAQAVGASAG-NARS-------------LVSEVLEFLATSGTNYNKTVASLMNAV 225 Query 241 FG-PTGATTYQNVFVTAANVTKFSTWANDAMSAPNLGMTEFKVFWQP--PPAPE-IPKSS 296 G P ++ Y ++ +K AND + + GM +F+ F+ P P P+ IPKS+ Sbjct 226 TGVPYASSVYNSMLGLGFAESKMVLPANDTVISTIFGMVQFQKFFNPVTPFNPDLIPKSA 285 Query 297 LGAGLGLRSGLSAGL---AHAASAGLGQANLVGDLSVPPSWASATPAVRLVANTLPATSL 353 LGAGLGLRS +S+GL A A SAG QA VG +SVPPSWA+ATPA+R VA +T L Sbjct 286 LGAGLGLRSAISSGLGSTAPAISAGASQAGSVGGMSVPPSWAAATPAIRTVAAVFSSTGL 345 Query 354 AAAPATQI-PANLLGQMALGSM---TGGALGAAAPAIYTGSG-ARARANGGTPSAEPVKL 408 A PA I + L QMAL S+ G A A + G G A S P KL Sbjct 346 QAVPAAAISEGSRLSQMALASVAGGALGGAAARATGGFLGGGRVTAVKKSLKDSDSPDKL 405 Query 409 EAVIAQLQKQPDAVRHWNVDKADLDGLLDRLSKQPGIHAVHVSNGDKPKVA 459 V+A + ++P++V+HW+ D+ LD LL L K+PGIHAVH++ G+K ++A Sbjct 406 RRVVAHMMEKPESVQHWHTDEDGLDDLLAELKKKPGIHAVHMAGGNKAEIA 456 >gi|183981477|ref|YP_001849768.1| PPE family protein [Mycobacterium marinum M] gi|183174803|gb|ACC39913.1| PPE family protein [Mycobacterium marinum M] Length=469 Score = 315 bits (806), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 236/477 (50%), Positives = 298/477 (63%), Gaps = 19/477 (3%) Query 1 MDFGLQPPEITSGEMYLGPGAGPMLAAAVAWDGLAAELQSMAASYASIVEGMASESWLGP 60 M + PPEI SG MY GPG+GPMLAAAVAW+GLAAELQS AASY+S++ G+ S SW+GP Sbjct 1 MFYAAFPPEINSGRMYTGPGSGPMLAAAVAWNGLAAELQSTAASYSSVISGLISGSWVGP 60 Query 61 SSAGMAAAAAPYVTWMSGTSAQAKAAADQARAAVVAYETAFAAVVPPPQIAANRSQLISL 120 S+ MAAAA PYVTW++ T+AQA AADQA AA AYE AFAA VPPP IA NRSQL +L Sbjct 61 SALAMAAAAGPYVTWVNSTAAQATQAADQATAAAGAYEIAFAAHVPPPVIATNRSQLAAL 120 Query 121 VATNIFGQNTAAIAATEAEYGEMWAQDTMAMFGYASSSATASRLTPFTAPPQTTNPSGLA 180 VA+N+ GQNTAAIAATEA+Y EMW QD +AM YAS+SA AS++TPF+ PPQ + SGLA Sbjct 121 VASNLVGQNTAAIAATEAQYAEMWVQDAIAMDTYASASAAASQVTPFSEPPQIVDASGLA 180 Query 181 GQAAATGQATALASGTNAVTTALSSAAAQFPFDIIPTLLQGLATLSTQYTQLMGQLINAI 240 QAAA GQA + ++G A ++ I LLQ A L+ YT QL+N + Sbjct 181 NQAAAAGQAASTSAGAAAQAILANNP--------ISALLQLGADLANGYTATATQLLNTL 232 Query 241 FGPTGATTYQNVFVTAANVTKFSTWANDAMSAPNLGMTE-FKVFWQPPPAPEIPKSSLGA 299 FGP+GA TY +F V+ ND NL +++ K +P +PK +LG Sbjct 233 FGPSGAETYLTLFGAVDEVSSNLAVLNDEGLLVNLPISQALKYGNKPVEFGVLPKDALGG 292 Query 300 GLGLRSGLSAGLAHAA------SAGLGQANLVGDLSVPPSWASATPAVRLVANTLPATSL 353 GLGL G A +A G+ LVG LSVPPSWA ATP +R VA L A Sbjct 293 GLGLAPNFGKGTLFGAIRPDDVAAHFGRGTLVGKLSVPPSWAVATPDIRAVAAALSAAGP 352 Query 354 AAAPATQI-PANLLGQMALGSMTGGALGAAAPAIYTG---SGARARANGGTPSAEPVKLE 409 A A + +LL M++ M G A GA AP+ G G R P KL+ Sbjct 353 HAVSAAALGQGSLLSSMSMAGMAGAAFGAGAPSAVAGAAVKGGRNTLEDLKDRHSPEKLK 412 Query 410 AVIAQLQKQPDAVRHWNVDKADLDGLLDRLSKQPGIHAVHVSNGDKPKVALPDTQLG 466 ++AQ+ ++PD+V+H +VD+ LD LL +LSK+PG+HAVH+S G KPK+ D QLG Sbjct 413 RLVAQISEKPDSVQHHSVDQEGLDSLLGQLSKKPGVHAVHLSKGKKPKIVPSDAQLG 469 >gi|183982692|ref|YP_001850983.1| PPE family protein, PPE30 [Mycobacterium marinum M] gi|183176018|gb|ACC41128.1| PPE family protein, PPE30 [Mycobacterium marinum M] Length=468 Score = 311 bits (797), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 237/479 (50%), Positives = 297/479 (63%), Gaps = 24/479 (5%) Query 1 MDFGLQPPEITSGEMYLGPGAGPMLAAAVAWDGLAAELQSMAASYASIVEGMASESWLGP 60 M + PPEI SG MY GPG+GP+LAAA AWD +AAELQS AA+++S++ + S W+GP Sbjct 1 MFYAAFPPEINSGRMYTGPGSGPLLAAAAAWDAVAAELQSTAAAFSSVIASLTSGPWIGP 60 Query 61 SSAGMAAAAAPYVTWMSGTSAQAKAAADQARAAVVAYETAFAAVVPPPQIAANRSQLISL 120 SS MAAA APYVTWM T+AQA AA QA AA AYETAFAA VPP +IAANR+QL L Sbjct 61 SSLAMAAAVAPYVTWMGATAAQAAQAATQATAAATAYETAFAAHVPPVEIAANRAQLAML 120 Query 121 VATNIFGQNTAAIAATEAEYGEMWAQDTMAMFGYASSSATASRLTPFTAPPQTTNPSGLA 180 VATN+FGQNTAAIAA E++Y EMWAQD AM GYASSSA AS +TPF PPQ N +GLA Sbjct 121 VATNLFGQNTAAIAAAESQYAEMWAQDATAMDGYASSSAAASEVTPFAEPPQVVNAAGLA 180 Query 181 GQAAATGQATALASGTNAVTTALSSAAAQFPFDIIPTLLQGLATLSTQYTQLMGQLINAI 240 QAA GQA A + V L++ I LLQ A LST YT + L+N + Sbjct 181 SQAAVVGQAAAASPAAT-VQDLLATGP-------ISWLLQLGADLSTGYTAAVTALLNGL 232 Query 241 FGPTGATTYQNVFVTAANVTKFSTWANDAMSAPNLGMTEFKVFWQPPPAPEIPKSSLGAG 300 FGP+GATTY ++ F+T ND N ++F F P +PK +LG G Sbjct 233 FGPSGATTYLTLYNAIKTPLNFTTGFNDIGLLINFPASQFLKFAPHPGLGPLPKDALGGG 292 Query 301 LGLRSGLSAGLAHAA------SAGLGQANLVGDLSVPPSWASATPAVRLVANTLPATSLA 354 LGL + G +A + G+ LVG L+VPPSWA+ATP +R VA L A Sbjct 293 LGLAPHWNQGTLFSAIQPEAMTPHWGRGTLVGKLTVPPSWAAATPTIRTVAAALSAAGPE 352 Query 355 AAPATQI-PANLLGQMALGSMTGGALGAAAPAIYTGSGARARANGGTPSAE------PVK 407 A PA + LL MA+ M G A GA AP Y +G R+R TP + P K Sbjct 353 AVPAAALGEGGLLSSMAVAGMLGSAFGAGAPDAYKRAGVRSRL---TPLKDLKDATSPEK 409 Query 408 LEAVIAQLQKQPDAVRHWNVDKADLDGLLDRLSKQPGIHAVHVSNGDKPKVALPDTQLG 466 L+ ++AQ+ ++P++V+H VD+ LD LL++L+K+PGIHAVH+S GDK KV D Q G Sbjct 410 LKRLVAQISEKPESVQHHTVDQEGLDSLLEQLAKKPGIHAVHLSKGDKAKVVPTDAQPG 468 >gi|118618456|ref|YP_906788.1| PPE family protein [Mycobacterium ulcerans Agy99] gi|118570566|gb|ABL05317.1| PPE family protein [Mycobacterium ulcerans Agy99] Length=468 Score = 298 bits (762), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 231/479 (49%), Positives = 292/479 (61%), Gaps = 24/479 (5%) Query 1 MDFGLQPPEITSGEMYLGPGAGPMLAAAVAWDGLAAELQSMAASYASIVEGMASESWLGP 60 M + PPEI SG +Y GPG+ P+LAAA AWD +AAELQS AA+++S++ + S W+GP Sbjct 1 MFYAAFPPEINSGRVYTGPGSEPLLAAAAAWDAVAAELQSTAAAFSSVIASLTSGPWIGP 60 Query 61 SSAGMAAAAAPYVTWMSGTSAQAKAAADQARAAVVAYETAFAAVVPPPQIAANRSQLISL 120 SS MAAA APYVTWM T+ QA AA QA AA AYETAFAA VPP +IAANR+QL L Sbjct 61 SSLAMAAAVAPYVTWMGATATQAAQAATQATAAATAYETAFAAHVPPVEIAANRAQLAML 120 Query 121 VATNIFGQNTAAIAATEAEYGEMWAQDTMAMFGYASSSATASRLTPFTAPPQTTNPSGLA 180 VATN+FGQNTAAIAA E++Y EMWAQD AM GYASSSA AS +TP P Q N +GLA Sbjct 121 VATNLFGQNTAAIAAAESQYAEMWAQDATAMDGYASSSAAASEVTPVAEPRQVVNAAGLA 180 Query 181 GQAAATGQATALASGTNAVTTALSSAAAQFPFDIIPTLLQGLATLSTQYTQLMGQLINAI 240 QAA GQA A + V L++ I LLQ A LST YT + L+N + Sbjct 181 SQAAVVGQAAAASPAAT-VQDLLATGP-------ISWLLQLGADLSTGYTAAVTALLNGL 232 Query 241 FGPTGATTYQNVFVTAANVTKFSTWANDAMSAPNLGMTEFKVFWQPPPAPEIPKSSLGAG 300 FGP+GATTY ++ F+T ND N ++ F P +PK +LG G Sbjct 233 FGPSGATTYLTLYNAIKTPLNFTTGFNDIGLLINFPASQLLKFAPHPGLGPLPKDALGGG 292 Query 301 LGLRSGLSAGLAHAA------SAGLGQANLVGDLSVPPSWASATPAVRLVANTLPATSLA 354 LGL + G +A + G+ LVG L+VPPSWA+ATP +R VA L A Sbjct 293 LGLAPHWNQGTLFSAIQPEAMTPHWGRGTLVGKLTVPPSWAAATPTIRTVAAALSAAGPE 352 Query 355 AAPATQI-PANLLGQMALGSMTGGALGAAAPAIYTGSGARARANGGTPSAE------PVK 407 A PA + LL MA+ M G A GA AP Y +G R+R TP + P K Sbjct 353 AVPAAALGEGGLLSSMAVAGMLGSAFGAGAPDAYKRAGVRSRL---TPLKDLKDATSPEK 409 Query 408 LEAVIAQLQKQPDAVRHWNVDKADLDGLLDRLSKQPGIHAVHVSNGDKPKVALPDTQLG 466 L+ ++AQ+ ++P++V+H VD+ LD LL++L+K+PGIHAVH+S GDK KV D Q G Sbjct 410 LKRLVAQISEKPESVQHHTVDQEGLDSLLEQLAKKPGIHAVHLSKGDKAKVVPTDAQPG 468 >gi|289443274|ref|ZP_06433018.1| PPE family protein [Mycobacterium tuberculosis T46] gi|289416193|gb|EFD13433.1| PPE family protein [Mycobacterium tuberculosis T46] Length=431 Score = 293 bits (750), Expect = 5e-77, Method: Compositional matrix adjust. Identities = 221/445 (50%), Positives = 279/445 (63%), Gaps = 27/445 (6%) Query 1 MDFGLQPPEITSGEMYLGPGAGPMLAAAVAWDGLAAELQSMAASYASIVEGMASESWLGP 60 MDFG+ PPEI SG MY GPG+GPMLAAA AWDGLA ELQS AA Y S++ + + W G Sbjct 1 MDFGVLPPEINSGRMYAGPGSGPMLAAAAAWDGLATELQSTAADYGSVIS-VLTGVWSGQ 59 Query 61 SSAGMAAAAAPYVTWMSGTSAQAKAAADQARAAVVAYETAFAAVVPPPQIAANRSQLISL 120 SS MAAAAAPYV WMS T+A A+ AA QA AA AYE AFAA VPPP +AANR++L L Sbjct 60 SSGTMAAAAAPYVAWMSATAALAREAAAQASAAAAAYEAAFAATVPPPVVAANRAELAVL 119 Query 121 VATNIFGQNTAAIAATEAEYGEMWAQDTMAMFGYASSSATASRLTPFTAPPQTTNPSGLA 180 ATNIFGQNT AIAA EA Y EMWAQD AM+GYA SS+ A+++TPF APP TTN +GLA Sbjct 120 AATNIFGQNTGAIAAAEARYAEMWAQDAAAMYGYAGSSSVATQVTPFAAPPPTTNAAGLA 179 Query 181 GQAAATGQATALASGTNAVTTALSSAAAQFPFDIIPTLLQGLATLSTQYTQLMGQLINAI 240 Q A QA ++G NA + ++ +L+ LAT T Y + + L+NA+ Sbjct 180 TQGVAVAQAVGASAG-NARS-------------LVSEVLEFLATAGTNYNKTVASLMNAV 225 Query 241 FG-PTGATTYQNVFVTAANVTKFSTWANDAMSAPNLGMTEFKVFWQP--PPAPE-IPKSS 296 G P ++ Y ++ +K AND + + GM +F+ F+ P P P+ IPKS+ Sbjct 226 TGVPYASSVYNSMLGLGFAESKMVLPANDTVISTIFGMVQFQKFFNPVTPFNPDLIPKSA 285 Query 297 LGAGLGLRSGLSAGL---AHAASAGLGQANLVGDLSVPPSWASATPAVRLVANTLPATSL 353 LGAGLGLRS +S+GL A A SAG QA VG +SVPPSWA+ATPA+R VA +T L Sbjct 286 LGAGLGLRSAISSGLGSTAPAISAGASQAGSVGGMSVPPSWAAATPAIRTVAAVFSSTGL 345 Query 354 AAAPATQI-PANLLGQMALGSM---TGGALGAAAPAIYTGSG-ARARANGGTPSAEPVKL 408 A PA I +LL QMAL S+ G A A + G G A S P KL Sbjct 346 QAVPAAAISEGSLLSQMALASVAGGALGGAAARATGGFLGGGRVTAVKKSLKDSDSPDKL 405 Query 409 EAVIAQLQKQPDAVRHWNVDKADLD 433 V+A + ++P++V+HW+ D+ LD Sbjct 406 RRVVAHMMEKPESVQHWHTDEDGLD 430 >gi|254231986|ref|ZP_04925313.1| PPE family protein [Mycobacterium tuberculosis C] gi|124601045|gb|EAY60055.1| PPE family protein [Mycobacterium tuberculosis C] Length=463 Score = 286 bits (733), Expect = 5e-75, Method: Compositional matrix adjust. Identities = 219/471 (47%), Positives = 282/471 (60%), Gaps = 27/471 (5%) Query 1 MDFGLQPPEITSGEMYLGPGAGPMLAAAVAWDGLAAELQSMAASYASIVEGMASESWLGP 60 MDFG+ PPEI SG MY GPG G AA Y S++ + + W G Sbjct 1 MDFGVLPPEINSGRMYAGPGRVRCWPRQRPGTGWPPNYSPTAADYGSVIS-VLTGVWSGQ 59 Query 61 SSAGMAAAAAPYVTWMSGTSAQAKAAADQARAAVVAYETAFAAVVPPPQIAANRSQLISL 120 SS MAAAAAPYV WMS T+A A+ AA QA AA AYE AFAA VPPP +AANR++L L Sbjct 60 SSRTMAAAAAPYVAWMSATAALAREAAAQASAAAAAYEAAFAATVPPPVVAANRAELAVL 119 Query 121 VATNIFGQNTAAIAATEAEYGEMWAQDTMAMFGYASSSATASRLTPFTAPPQTTNPSGLA 180 ATNIFGQNT AIAA EA Y EMWAQD AM+GYA SS+ A+++TPF APP TTN +GLA Sbjct 120 AATNIFGQNTGAIAAAEARYAEMWAQDAAAMYGYAGSSSVATQVTPFAAPPPTTNAAGLA 179 Query 181 GQAAATGQATALASGTNAVTTALSSAAAQFPFDIIPTLLQGLATLSTQYTQLMGQLINAI 240 Q A QA ++G NA + ++ +L+ LAT T Y + + L+NA+ Sbjct 180 TQGVAVAQAVGASAG-NARS-------------LVSEVLEFLATAGTNYNKTVASLMNAV 225 Query 241 FG-PTGATTYQNVFVTAANVTKFSTWANDAMSAPNLGMTEFKVFWQP--PPAPE-IPKSS 296 G P ++ Y ++ +K AND + + GM +F+ F+ P P P+ IPKS+ Sbjct 226 TGVPYASSVYNSMLGLGFAESKMVLPANDTVISTIFGMVQFQKFFNPVTPFNPDLIPKSA 285 Query 297 LGAGLGLRSGLSAGL---AHAASAGLGQANLVGDLSVPPSWASATPAVRLVANTLPATSL 353 LGAGLGLRS +S+GL A A SAG QA VG +SVPPSWA+ATPA+R VA +T L Sbjct 286 LGAGLGLRSAISSGLGSTAPAISAGASQAGSVGGMSVPPSWAAATPAIRTVAAVFSSTGL 345 Query 354 AAAPATQI-PANLLGQMALGSM---TGGALGAAAPAIYTGSG-ARARANGGTPSAEPVKL 408 A PA I +LL QMAL S+ G A A + G G A S P KL Sbjct 346 QAVPAAAISEGSLLSQMALASVAGGALGGAAARATGGFLGGGRVTAVKKSLKDSDSPDKL 405 Query 409 EAVIAQLQKQPDAVRHWNVDKADLDGLLDRLSKQPGIHAVHVSNGDKPKVA 459 V+A + ++P++V+HW+ D+ LD LL L K+PGIHAVH++ G+K ++A Sbjct 406 RRVVAHMMEKPESVQHWHTDEDGLDDLLAELKKKPGIHAVHMAGGNKAEIA 456 >gi|240171260|ref|ZP_04749919.1| PPE family protein [Mycobacterium kansasii ATCC 12478] Length=472 Score = 285 bits (728), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 224/490 (46%), Positives = 286/490 (59%), Gaps = 47/490 (9%) Query 1 MDFGLQPPEITSGEMYLGPGAGPMLAAAVAWDGLAAELQSMAASYASIVEGMASESWLGP 60 M F L PPEI SG MY GPG+GPML AA AWD LAA+L S AASY+S++ + + +W GP Sbjct 1 MYFALLPPEINSGRMYAGPGSGPMLTAAEAWDALAAQLYSTAASYSSVITAL-TATWQGP 59 Query 61 SSAGMAAAAAPYVTWMSGTSAQAKAAADQARAAVVAYETAFAAVVPPPQIAANRSQLISL 120 SS MA AAAPY+ W S T+AQ++ A QARAA VAYET FAA+VPPP IAANRS+L SL Sbjct 60 SSVSMATAAAPYMAWTSATAAQSEQTAAQARAAAVAYETTFAAMVPPPVIAANRSELASL 119 Query 121 VATNIFGQNTAAIAATEAEYGEMWAQDTMAMFGYASSSATASRLTPFTAPPQTTNPSGLA 180 VATNIFGQNT AIAA EA+Y +MWAQD AM YA SA A+ LTPF AP TT+P GL Sbjct 120 VATNIFGQNTPAIAANEAQYAQMWAQDATAMNNYAGQSAAATTLTPFAAPAATTSPGGLL 179 Query 181 GQAAA----------TGQATALASGTNAVTTALSSAAAQFPFDII---PTLLQGLATLST 227 GQ AA + T +A+ NA+ TAL S F I P + GL T + Sbjct 180 GQLAAIVNTYITQIVSSTQTQIANFFNAIPTALLS------FTTIVTGPNPISGLLTAAQ 233 Query 228 QYTQLMGQLINAIFG-----PTGATTYQNVFVTAANVTKFST-WANDAMSAPNLGMTEFK 281 + + Q IN++ G P ++F+T F T + N S Sbjct 234 DFAGM--QNINSLTGDLELIPKLILPVNDIFITIIMGLVFQTKYLNGLASTAAGAAAGNG 291 Query 282 VFWQPPPAPEIPKSSLGAGLGLRSGL--SAGLAHAASAGLGQANLVGDLSVPPSWASATP 339 S L AGLG L SAGL A +A +G A LVG ++VPPSWA+ATP Sbjct 292 G-----------GSVLAAGLGSGPNLAGSAGLGGAVAADVGHAGLVGGMAVPPSWATATP 340 Query 340 AVRLVANTLPATSLAAAPATQI-PANLLGQMALGSMTGGALGAAAPAIYTGSGARARA-- 396 A+R VA+ L A A + LL MA M G ALGAAAP G GAR R+ Sbjct 341 AIRTVASVLSGAGQNAVAAGAVSEGTLLSGMAGAGMVGSALGAAAPRGPGGGGARFRSTS 400 Query 397 --NGGTPSAE-PVKLEAVIAQLQKQPDAVRHWNVDKADLDGLLDRLSKQPGIHAVHVSNG 453 +G + E P L+ ++A++ ++P+ V+HW+ D A L+ L+ +L K+PGIHAVH+++G Sbjct 401 LKDGSSKDGESPENLQHLVAEMAEKPENVQHWHTDSAGLESLIAKLKKKPGIHAVHLTDG 460 Query 454 DKPKVALPDT 463 D + LP + Sbjct 461 DPNNLTLPKS 470 >gi|118462279|ref|YP_882537.1| PPE family protein [Mycobacterium avium 104] gi|254775797|ref|ZP_05217313.1| PPE family protein [Mycobacterium avium subsp. avium ATCC 25291] gi|118163566|gb|ABK64463.1| PPE family protein [Mycobacterium avium 104] gi|212596099|gb|ACJ35551.1| PPE28 [Mycobacterium avium subsp. avium] Length=454 Score = 276 bits (707), Expect = 4e-72, Method: Compositional matrix adjust. Identities = 220/471 (47%), Positives = 293/471 (63%), Gaps = 27/471 (5%) Query 2 DFGLQPPEITSGEMYLGPGAGPMLAAAVAWDGLAAELQSMAASYASIVEGMASESWLGPS 61 DF PPE+ S ++++GPGA P+LAAA AWDGLAAEL AASYAS++ + ESW G S Sbjct 5 DFATLPPEVISTQIHVGPGAVPLLAAAAAWDGLAAELHGTAASYASVISELVGESWQGSS 64 Query 62 SAGMAAAAAPYVTWMSGTSAQAKAAADQARAAVVAYETAFAAVVPPPQIAANRSQLISLV 121 S MAAAAAPYV W+S T+ A+ A QARAA AYE+A AA VPP +AANRS L +L+ Sbjct 65 SESMAAAAAPYVAWLSATAGLAEQTAAQARAAAAAYESAVAATVPPAVVAANRSLLATLL 124 Query 122 ATNIFGQNTAAIAATEAEYGEMWAQDTMAMFGYASSSATASRLTPFTAPPQTTNPSGLAG 181 TNI GQN AAIAATE EYG+MWAQD AMF YA++S +A LTPF P TTN +G A Sbjct 125 QTNILGQNDAAIAATEDEYGQMWAQDVAAMFSYAAASESAGELTPFEQAPATTNDAGPAT 184 Query 182 QAAATGQATALASGTNAVTTALSSAAAQFPFDIIPTLLQGLATLSTQYTQLMGQLINAIF 241 QAAA A +T+LSS Q I +L+ QYTQ LI Sbjct 185 QAAAAAAAE---------STSLSSWLKQLEAYI--------TSLTGQYTQFWQNLIG--- 224 Query 242 GPTGATT----YQNVFVTAANVTKFSTWANDAMSAPNLGMTEFKVFW-QPPPAPEIPKSS 296 G TG+T ++ ++ + + V +TW N + LG++++K F+ P + + KSS Sbjct 225 GATGSTEIAPFWETLYSSISQVGTQATWTNVVNATIGLGVSQWKNFFIYAPWSAAMAKSS 284 Query 297 LGAGLGLRSGLSAGL-AHAASAGLGQANLVGDLSVPPSWASATPAVRLVANTLPATSLAA 355 LGAGL +++G+ A SA LG A VG+LSVP WA+A PA+RL A+T + A Sbjct 285 LGAGLASPGHIASGIAAKPVSAVLGNAPTVGELSVPAGWATAAPAIRL-ASTALPATSLA 343 Query 356 APATQIPANLLGQMALGSMTGGALGAAAPAIYTGSGARARANGGTPSAEPVKLEAVIAQL 415 A A + ++ + LGS+ GGALG+ A + + +G RA G PVKL+ +IAQL Sbjct 344 AAAATDFSGVVNEATLGSLAGGALGSPAARVVSTTGIPTRAITGERRQGPVKLDRIIAQL 403 Query 416 QKQPDAVRHWNVDKADLDGLLDRLSKQPGIHAVHVSNGDKPKVALPDTQLG 466 Q+ P+ V+HWNVD+A LD L+ RL PG+HAVHV++G++ V P ++LG Sbjct 404 QQMPEQVQHWNVDEAGLDDLVARLRTTPGVHAVHVTDGEQVAVGSPASKLG 454 >gi|296170357|ref|ZP_06851948.1| PPE family protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295895080|gb|EFG74799.1| PPE family protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=459 Score = 274 bits (700), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 218/476 (46%), Positives = 273/476 (58%), Gaps = 34/476 (7%) Query 1 MDFGLQPPEITSGEMYLGPGAGPMLAAAVAWDGLAAELQSMAASYASIVEGMASESWLGP 60 MD+G+ PPEI S MY GPG+G ML AA AWD LA EL+S+AASY++++ G+ + +WLGP Sbjct 1 MDYGVLPPEINSARMYAGPGSGSMLTAAAAWDELATELRSIAASYSAVISGLTT-AWLGP 59 Query 61 SSAGMAAAAAPYVTWMSGTSAQAKAAADQARAAVVAYETAFAAVVPPPQIAANRSQLISL 120 SS MAAAAAPY W++ T+AQA+ + QARAA AYE AFAA VPPP I NR++L SL Sbjct 60 SSTRMAAAAAPYAAWLNATAAQAEQSGSQARAAAAAYEAAFAATVPPPVIETNRAELESL 119 Query 121 VATNIFGQNTAAIAATEAEYGEMWAQDTMAMFGYASSSATASRLTPFTAPPQTTNPSGLA 180 +ATN FGQNTAAIAA EA Y MWAQD AM+GYA SA A+ +TPF P Q TNP+G A Sbjct 120 IATNTFGQNTAAIAANEARYARMWAQDAAAMYGYAGQSAAAAAVTPFDPPAQNTNPAGTA 179 Query 181 GQAAATGQATALASGTNAVTTALSSAAAQFPFDIIPTLLQGLA--------TLSTQYTQL 232 GQ AA Q ++GTN S AA P+ L+ LA + S+ + L Sbjct 180 GQTAAVSQVVGTSAGTN------SQAALSHLTSATPSALRSLAAPAAVNPPSASSLASFL 233 Query 233 MGQLINAIFGPTGATTYQNVFVTAANVTKFSTWANDAMSAPNLGMTEFKVFWQPPPAPEI 292 + + G V AN ST + A +LG V P Sbjct 234 SSLNSSPLAKLAGNVELIPKAVLPANDVLISTIMGLVIGARHLGDLTVAVKAATP----- 288 Query 293 PKSSLGAGLGLRSGLSAGLAHAASAGLGQANLVGDLSVPPSWASATPAVRLVANTLPATS 352 L AGLG + L SA +GQA LVG L+VPPSWA ATPA+R VA L TS Sbjct 289 ---GLAAGLGY---AAPALGSTVSATVGQAGLVGGLAVPPSWAVATPAIRTVAAVLSGTS 342 Query 353 LAA-APATQIPANLLGQMALGSMTGGALGAAAPAIYTGSGARARANGGTPSA------EP 405 +A A AT + +A+ M GGALGAA P G G + R A P Sbjct 343 ESAVAAATVSEGSFFSGLAVAGMAGGALGAALPRALPGVGVKGRKQPVKDGASLKDGDSP 402 Query 406 VKLEAVIAQLQKQPDAVRHWNVDKADLDGLLDRLSKQPGIHAVHVSNGDKPKVALP 461 L+ V+A++ + P +V+HW+ D LDGLLD L K+PG HAVHV NG KP++ LP Sbjct 403 ENLQRVVAEMAENPGSVQHWHTDPDHLDGLLDELRKKPGTHAVHVKNG-KPRMTLP 457 >gi|254775385|ref|ZP_05216901.1| hypothetical protein MaviaA2_12051 [Mycobacterium avium subsp. avium ATCC 25291] gi|212596014|gb|ACJ35544.1| PPE19 [Mycobacterium avium subsp. avium] Length=467 Score = 271 bits (693), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 219/474 (47%), Positives = 281/474 (60%), Gaps = 15/474 (3%) Query 1 MDFGLQPPEITSGEMYLGPGAGPMLAAAVAWDGLAAELQSMAASYASIVEGMASESWLGP 60 M +G PPE SG MY GPGAG +AAA AW LAAELQS AASY+S++ G+ + W+GP Sbjct 1 MFYGAFPPEFNSGRMYSGPGAGSFVAAATAWQNLAAELQSAAASYSSVLSGLTAGPWVGP 60 Query 61 SSAGMAAAAAPYVTWMSGTSAQAKAAADQARAAVVAYETAFAAVVPPPQIAANRSQLISL 120 SS MA+AAAPYV WM T+AQA A QA AA AYE AFAA VPP IA NR+ L L Sbjct 61 SSLAMASAAAPYVAWMQQTAAQAAETAAQATAAATAYEAAFAAHVPPAVIAENRALLAQL 120 Query 121 VATNIFGQNTAAIAATEAEYGEMWAQDTMAMFGYASSSAT-ASRLTPFTAPPQTTNPSGL 179 VATNIFGQNTAAIAA EA+YGE WAQD AM Y ++SAT A++LT F P+TTN + Sbjct 121 VATNIFGQNTAAIAANEAQYGEFWAQDATAMDTYFAASATAANKLTEFGPAPKTTNEAAQ 180 Query 180 AGQAAATGQATALASGTNAVTTALSSAAAQFPFDIIPTLLQGLATLSTQYTQLMGQLINA 239 QAAA + A N TA S+A+ P+ G A L+ Y M L N Sbjct 181 PMQAAAV-SSAASTPAANVAQTAASAASTTLPYS---GPFSGPANLAYLYQTFMTNLFNT 236 Query 240 IFGPTGATTYQNVFVTAANVTKFSTWANDAMSAPNLGMTEFKVFWQPPPAPEIPKSSLGA 299 + P GA+ Y +++ +T ND N ++++ F P +PK +LGA Sbjct 237 V--PGGASFYTSMYNAVKVPLGLTTQFNDVGLLVNFPLSQWLKFAPPIGYGALPKDALGA 294 Query 300 GLGLRSGLSAGLAHAAS--AGLGQA-NLVGDLSVPPSWASATPAVRLVANTLPATSLAAA 356 GLG L A S AG+G A LVG LS+PPSWA+ATP++R VA L A A Sbjct 295 GLGALGFGRGTLYSAISPVAGMGNAGTLVGKLSIPPSWATATPSIRTVAAALSAAGTEAV 354 Query 357 PATQI-PANLLGQMALGSMTGGALGAAAPAIYTGSGARARANGGTPSAE---PVKLEAVI 412 PA + +L M L M G A+G+ P + G G R R + P +L+ ++ Sbjct 355 PAAALGEGSLFSSMGLAGMLGSAVGSGGPTMVRG-GVRNRMTAIKDLKDKQSPEQLKRLV 413 Query 413 AQLQKQPDAVRHWNVDKADLDGLLDRLSKQPGIHAVHVSNGDKPKVALPDTQLG 466 AQ+ +QP++V+H NVD+ +LD LL++L+K+PGIHAVH+ GDK KV D QLG Sbjct 414 AQISEQPESVQHHNVDQENLDALLEQLAKKPGIHAVHLKKGDKSKVLPADAQLG 467 >gi|212596776|gb|ACJ35605.1| PPE44 [Mycobacterium intracellulare ATCC 13950] Length=460 Score = 270 bits (689), Expect = 5e-70, Method: Compositional matrix adjust. Identities = 232/474 (49%), Positives = 283/474 (60%), Gaps = 24/474 (5%) Query 1 MDFGLQPPEITSGEMYLGPGAGPMLAAAVAWDGLAAELQSMAASYASIVEGMASESWLGP 60 MDFG PPEI SG MY G GAG MLAAA AWDGLAA+L S A SY S++ + S W GP Sbjct 3 MDFGAFPPEINSGRMYAGEGAGSMLAAASAWDGLAAQLHSAATSYESVISNLTS-GWQGP 61 Query 61 SSAGMAAAAAPYVTWMSGTSAQAKAAADQARAAVVAYETAFAAVVPPPQIAANRSQLISL 120 SS MA AAAPY WMS T+AQA+ AA +ARAA AYE AF A VPP IA NR +L SL Sbjct 62 SSLTMAGAAAPYAAWMSTTAAQAEQAASRARAAAAAYEAAFTATVPPVAIAENRGRLASL 121 Query 121 VATNIFGQNTAAIAATEAEYGEMWAQDTMAMFGYASSSATASRLTPFTAPPQTTNPSGLA 180 VATN+ GQNTAAIAATEAEY +MWAQD AM+GYA SSA A++L PF APPQTTNP+G A Sbjct 122 VATNLLGQNTAAIAATEAEYAQMWAQDAAAMYGYAGSSAIAAQLEPFNAPPQTTNPAGGA 181 Query 181 GQAAATGQA--TALASGTNAVTTALSSAAAQFPFDIIPTLLQGLAT---LSTQYTQLMGQ 235 GQ+ A QA TA A+ +A+ +SS P LQ A+ L + Sbjct 182 GQSGAVAQAAGTAPANAQSALAQLMSS---------TPRTLQSFASPSALPAADPSSLAT 232 Query 236 LINAIFGPTGATTYQNVFVTAANVTKFSTWANDAMSAPNLGMTEFKVFWQPPPAPEIPKS 295 +N + +T + VTK ND + + +LG+ W A E+ + Sbjct 233 WLNNL----NSTPLAKIAANIEFVTKGIRPVNDTLLSLSLGLVATARTWG-DTAVEL-EG 286 Query 296 SLGAGLGLRS-GLSAGLAHAASAGLGQANLVGDLSVPPSWASATPAVRLVANTLPATSLA 354 L A LG + A A A +AGLG A L G LSVPPSWA A+PAV+L A L TS Sbjct 287 PLFASLGSSTPAAGAVGASAVTAGLGNAGLAGALSVPPSWAVASPAVKLAATVLEYTSAG 346 Query 355 AAPATQIPANLLGQMALGSMTGGALGAAAPAIYTGSGAR--ARANGGTPSAEPVKLEAVI 412 AAP A LGQM L + GGALG A P S R R + P KL+ V+ Sbjct 347 AAPTVAAGAGALGQMGLAGLAGGALGGAVPRAVAASPTRGLGRRSSDNDDKTPDKLKTVL 406 Query 413 AQLQKQPDAVRHWNVDKADLDGLLDRLSKQPGIHAVHVSNGDKPKVALPDTQLG 466 A+LQ+ P++V+HW+ DKA L+ LLD+LSK+PG+HAVH+S+ DK K P G Sbjct 407 AELQEAPESVQHWHTDKAHLESLLDQLSKKPGVHAVHLSSADKSKATPPRATWG 460 >gi|296164792|ref|ZP_06847352.1| PPE family protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295899846|gb|EFG79292.1| PPE family protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=469 Score = 268 bits (686), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 220/479 (46%), Positives = 279/479 (59%), Gaps = 23/479 (4%) Query 1 MDFGLQPPEITSGEMYLGPGAGPMLAAAVAWDGLAAELQSMAASYASIVEGMASESWLGP 60 M +G PPE SG MY GPG ++AAA AW+ LA +LQ+ A++Y+S+V + + W+GP Sbjct 1 MFYGAFPPEFNSGRMYSGPGPESLVAAATAWENLATDLQATASAYSSVVSSLTTGPWVGP 60 Query 61 SSAGMAAAAAPYVTWMSGTSAQAKAAADQARAAVVAYETAFAAVVPPPQIAANRSQLISL 120 SS MAAAAAPYV W+ T+AQA A QA AV AYETAFAA VPPP IAANR+ L L Sbjct 61 SSMAMAAAAAPYVAWIQQTAAQAAQTAAQATQAVAAYETAFAAHVPPPVIAANRALLAQL 120 Query 121 VATNIFGQNTAAIAATEAEYGEMWAQDTMAMFGYASSSATASR-LTPFTAPPQTTNPSGL 179 VATN+FGQNTAAIAA EAEYG+MWAQD AM Y +SSATAS L F+ PQTTN S Sbjct 121 VATNLFGQNTAAIAANEAEYGDMWAQDATAMDTYFASSATASNSLQEFSPAPQTTNQSAG 180 Query 180 AGQAAATGQATALASGTNAVTTALSSAAAQFPFDIIPTL------LQGLATLSTQYTQLM 233 QAAA Q A+GT VT L+ A ++ T L LA L T Y Sbjct 181 PMQAAALTQTANTAAGT--VTKNLAGTA-----NLAGTTTGATGPLAWLANLGTAYQTFW 233 Query 234 GQLINAIFGPTGATTYQNVFVTAANVTKFSTWANDAMSAPNLGMTEFKVFWQPPPAPEIP 293 L+N I P GA Y ++ +T ND N ++++ F P +P Sbjct 234 TNLLNTI--PGGANFYTAMYNAVKVPLGLTTTFNDIGLLINFPVSQWLKFAPPIAYGALP 291 Query 294 KSSLGAGLGLRSGLSAGLAHAAS--AGLGQANLVGDLSVPPSWASATPAVRLVANTLPAT 351 K +LGAGLG L A S AG + LVG L+VPPSWASATPA+R VA L A Sbjct 292 KDALGAGLGALGFSRGTLFDALSPTAGFARGTLVGSLTVPPSWASATPAIRTVAAALSAA 351 Query 352 SLAAAPATQI-PANLLGQMALGSMTGGALGAAAPAIYTGSGARAR---ANGGTPSAEPVK 407 A PA + +L M + M G ALG+ P + G+G R R P + Sbjct 352 GPEAVPAAALGEGSLFSSMGMAGMLGSALGSGGPTV-VGAGVRNRMKPIKDLKDKQSPEQ 410 Query 408 LEAVIAQLQKQPDAVRHWNVDKADLDGLLDRLSKQPGIHAVHVSNGDKPKVALPDTQLG 466 L+ ++AQ+ +QP+ V+H +VD+ LD LL++L+K+PGIHAVH+ GDK KV D Q+G Sbjct 411 LKRLVAQISEQPETVQHHSVDQEGLDALLEQLAKKPGIHAVHLKKGDKSKVLPADAQIG 469 >gi|41407251|ref|NP_960087.1| hypothetical protein MAP1153 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41395603|gb|AAS03470.1| hypothetical protein MAP_1153 [Mycobacterium avium subsp. paratuberculosis K-10] Length=454 Score = 261 bits (667), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 221/471 (47%), Positives = 291/471 (62%), Gaps = 27/471 (5%) Query 2 DFGLQPPEITSGEMYLGPGAGPMLAAAVAWDGLAAELQSMAASYASIVEGMASESWLGPS 61 DF PPE+ S ++++GPGA P+LAAA AWDGLAAEL AASYAS++ + ESW G S Sbjct 5 DFATLPPEVISTQIHVGPGAVPLLAAAAAWDGLAAELHGTAASYASVISELVVESWQGSS 64 Query 62 SAGMAAAAAPYVTWMSGTSAQAKAAADQARAAVVAYETAFAAVVPPPQIAANRSQLISLV 121 S MAAAAAPYV W+S T+ A+ A QARAA AYE A AA VPP +AANRS L +L+ Sbjct 65 SGSMAAAAAPYVAWLSATAGLAEQTAAQARAAAAAYEAAVAATVPPAVVAANRSLLATLL 124 Query 122 ATNIFGQNTAAIAATEAEYGEMWAQDTMAMFGYASSSATASRLTPFTAPPQTTNPSGLAG 181 TNI GQN AAIAATE EYG+MWAQD AMF YA++S +A LTPF P TTN +G A Sbjct 125 QTNILGQNDAAIAATEDEYGQMWAQDVAAMFSYAAASESAGELTPFEQAPATTNDAGPAT 184 Query 182 QAAATGQATALASGTNAVTTALSSAAAQFPFDIIPTLLQGLATLSTQYTQLMGQLINAIF 241 QAAA A +T+LSS Q I +L+ QYTQ LI Sbjct 185 QAAAAAAAE---------STSLSSWLKQLEAYI--------TSLTGQYTQFWQNLIG--- 224 Query 242 GPTGATT----YQNVFVTAANVTKFSTWANDAMSAPNLGMTEFKVFW-QPPPAPEIPKSS 296 G TG+T ++ ++ + + V +TW N + LG++++K F+ P + + KSS Sbjct 225 GATGSTEIAPFWETLYSSISQVGTQATWTNVVNATIGLGVSQWKNFFIYAPWSAAMAKSS 284 Query 297 LGAGLGLRSGLSAGL-AHAASAGLGQANLVGDLSVPPSWASATPAVRLVANTLPATSLAA 355 LGAGL +++G+ A SA LG A VG LSVP WA+A PA+RL A+T + A Sbjct 285 LGAGLASPGHIASGIAAKPVSAVLGNAPTVGKLSVPAGWATAAPAIRL-ASTALPATSLA 343 Query 356 APATQIPANLLGQMALGSMTGGALGAAAPAIYTGSGARARANGGTPSAEPVKLEAVIAQL 415 A A + L+ + LGS+ GGALG+ A + + +G RA G PVKL+ +IAQL Sbjct 344 AAAATDFSGLVNEATLGSLAGGALGSPAARVVSTTGIPTRAITGERRQGPVKLDRIIAQL 403 Query 416 QKQPDAVRHWNVDKADLDGLLDRLSKQPGIHAVHVSNGDKPKVALPDTQLG 466 Q+ P+ V+HWNVD+A LD L+ RL PG+HAVHV++G++ V P ++LG Sbjct 404 QEMPEQVQHWNVDEAGLDDLVARLRTTPGVHAVHVTDGEQVAVGSPASKLG 454 >gi|336457981|gb|EGO36968.1| PPE-repeat containing protein [Mycobacterium avium subsp. paratuberculosis S397] Length=505 Score = 260 bits (665), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 219/466 (47%), Positives = 287/466 (62%), Gaps = 27/466 (5%) Query 2 DFGLQPPEITSGEMYLGPGAGPMLAAAVAWDGLAAELQSMAASYASIVEGMASESWLGPS 61 DF PPE+ S ++++GPGA P+LAAA AWDGLAAEL AASYAS++ + ESW G S Sbjct 5 DFATLPPEVISTQIHVGPGAVPLLAAAAAWDGLAAELHGTAASYASVISELVVESWQGSS 64 Query 62 SAGMAAAAAPYVTWMSGTSAQAKAAADQARAAVVAYETAFAAVVPPPQIAANRSQLISLV 121 S MAAAAAPYV W+S T+ A+ A QARAA AYE A AA VPP +AANRS L +L+ Sbjct 65 SESMAAAAAPYVAWLSATAGLAEQTAAQARAAAAAYEAAVAATVPPAVVAANRSLLATLL 124 Query 122 ATNIFGQNTAAIAATEAEYGEMWAQDTMAMFGYASSSATASRLTPFTAPPQTTNPSGLAG 181 TNI GQN AAIAATE EYG+MWAQD AMF YA++S +A LTPF P TTN +G A Sbjct 125 QTNILGQNDAAIAATEDEYGQMWAQDVAAMFSYAAASESAGELTPFEQAPATTNDAGPAT 184 Query 182 QAAATGQATALASGTNAVTTALSSAAAQFPFDIIPTLLQGLATLSTQYTQLMGQLINAIF 241 QAAA A +T+LSS Q I +L+ QYTQ LI Sbjct 185 QAAAAAAAE---------STSLSSWLKQLEAYI--------TSLTGQYTQFWQNLIG--- 224 Query 242 GPTGATT----YQNVFVTAANVTKFSTWANDAMSAPNLGMTEFKVFW-QPPPAPEIPKSS 296 G TG+T ++ ++ + + V +TW N + LG++++K F+ P + + KSS Sbjct 225 GATGSTEIAPFWETLYSSISQVGTQATWTNVVNATIGLGVSQWKNFFIYAPWSAAMAKSS 284 Query 297 LGAGLGLRSGLSAGL-AHAASAGLGQANLVGDLSVPPSWASATPAVRLVANTLPATSLAA 355 LGAGL +++G+ A SA LG A VG LSVP WA+A PA+RL A+T + A Sbjct 285 LGAGLASPGHIASGIAAKPVSAVLGNAPTVGKLSVPAGWATAAPAIRL-ASTALPATSLA 343 Query 356 APATQIPANLLGQMALGSMTGGALGAAAPAIYTGSGARARANGGTPSAEPVKLEAVIAQL 415 A A + L+ + LGS+ GGALG+ A + + +G RA G PVKL+ +IAQL Sbjct 344 AAAATDFSGLVNEATLGSLAGGALGSPAARVVSTTGIPTRAITGERRQGPVKLDRIIAQL 403 Query 416 QKQPDAVRHWNVDKADLDGLLDRLSKQPGIHAVHVSNGDKPKVALP 461 Q+ P+ V+HWNVD+A LD L+ RL PG+HAVHV++G++ V P Sbjct 404 QEMPEQVQHWNVDEAGLDDLVARLRTTPGVHAVHVTDGEQVAVGSP 449 >gi|41407617|ref|NP_960453.1| hypothetical protein MAP1519 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41395970|gb|AAS03836.1| hypothetical protein MAP_1519 [Mycobacterium avium subsp. paratuberculosis K-10] gi|336457568|gb|EGO36573.1| PPE-repeat containing protein [Mycobacterium avium subsp. paratuberculosis S397] Length=467 Score = 259 bits (661), Expect = 9e-67, Method: Compositional matrix adjust. Identities = 218/474 (46%), Positives = 281/474 (60%), Gaps = 15/474 (3%) Query 1 MDFGLQPPEITSGEMYLGPGAGPMLAAAVAWDGLAAELQSMAASYASIVEGMASESWLGP 60 M +G PPE SG MY GPGAG +AAA AW LAAELQS AASY++++ G+ + W+GP Sbjct 1 MFYGAFPPEFNSGRMYSGPGAGSFVAAATAWQNLAAELQSAAASYSTVLSGLTAGPWVGP 60 Query 61 SSAGMAAAAAPYVTWMSGTSAQAKAAADQARAAVVAYETAFAAVVPPPQIAANRSQLISL 120 SS MA+AAAPYV WM T+AQA A QA AA AYETAFAA VPP I NR+ L L Sbjct 61 SSLAMASAAAPYVAWMQQTAAQAAETAAQATAAATAYETAFAAHVPPAVITENRALLAQL 120 Query 121 VATNIFGQNTAAIAATEAEYGEMWAQDTMAMFGYASSSAT-ASRLTPFTAPPQTTNPSGL 179 VATNIFGQNTAAIAA EA+YGE WAQD AM Y ++SAT A++LT F P+TTN + Sbjct 121 VATNIFGQNTAAIAANEAQYGEFWAQDATAMDTYFAASATAANKLTEFGPAPKTTNEAAQ 180 Query 180 AGQAAATGQATALASGTNAVTTALSSAAAQFPFDIIPTLLQGLATLSTQYTQLMGQLINA 239 QAAA + A N TA S+A+ P+ G A L+ Y M L N Sbjct 181 PMQAAAV-SSAASTPAANVAQTAASAASTTLPYS---GPFSGPANLAYLYQTFMTNLFNT 236 Query 240 IFGPTGATTYQNVFVTAANVTKFSTWANDAMSAPNLGMTEFKVFWQPPPAPEIPKSSLGA 299 + P GA+ Y +++ +T ND N ++++ F P +PK +LGA Sbjct 237 V--PGGASFYTSMYNAVKVPLGLTTQFNDVGLLVNFPLSQWLKFAPPIGYGALPKDALGA 294 Query 300 GLGLRSGLSAGLAHAAS--AGLGQA-NLVGDLSVPPSWASATPAVRLVANTLPATSLAAA 356 GLG L A S AG+G A LVG LS+PPSWA+ATP++R VA L A A Sbjct 295 GLGALGFGRGTLYSAISPVAGMGNAGTLVGKLSIPPSWATATPSIRTVAAALSAAGAEAV 354 Query 357 PATQI-PANLLGQMALGSMTGGALGAAAPAIYTGSGARARANGGTPSAE---PVKLEAVI 412 PA + +L M L M G A+G+ P + G G R R + P +L+ ++ Sbjct 355 PAAALGEGSLFSSMGLAGMLGSAVGSGGPTMVRG-GVRNRMTAIKDLKDKQSPEQLKRLV 413 Query 413 AQLQKQPDAVRHWNVDKADLDGLLDRLSKQPGIHAVHVSNGDKPKVALPDTQLG 466 AQ+ +QP++V+H NVD+ +LD LL++L+K+PGIHAVH+ GDK KV D QLG Sbjct 414 AQISEQPESVQHHNVDQENLDALLEQLAKKPGIHAVHLKKGDKSKVLPADAQLG 467 >gi|118465656|ref|YP_882095.1| PPE family protein [Mycobacterium avium 104] gi|118166943|gb|ABK67840.1| PPE family protein [Mycobacterium avium 104] Length=467 Score = 258 bits (658), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 219/474 (47%), Positives = 281/474 (60%), Gaps = 15/474 (3%) Query 1 MDFGLQPPEITSGEMYLGPGAGPMLAAAVAWDGLAAELQSMAASYASIVEGMASESWLGP 60 M +G PPE SG MY GPGAG +AAA AW LAAELQS AASY+S++ G+ + W+GP Sbjct 1 MFYGAFPPEFNSGRMYSGPGAGSFVAAATAWQNLAAELQSAAASYSSVLSGLTAGPWVGP 60 Query 61 SSAGMAAAAAPYVTWMSGTSAQAKAAADQARAAVVAYETAFAAVVPPPQIAANRSQLISL 120 SS MA+AAAPYV WM T+AQA A QA AA AYETAFAA VPP IA NR+ L L Sbjct 61 SSLAMASAAAPYVAWMQQTAAQAAETAAQATAAATAYETAFAAHVPPAVIAENRALLAQL 120 Query 121 VATNIFGQNTAAIAATEAEYGEMWAQDTMAMFGYASSSAT-ASRLTPFTAPPQTTNPSGL 179 VATNIFGQNTAAIAA EA+YGE WAQD AM Y ++SAT A++LT F P+TTN + Sbjct 121 VATNIFGQNTAAIAANEAQYGEFWAQDATAMDTYFAASATAANKLTEFGPAPKTTNEAAQ 180 Query 180 AGQAAATGQATALASGTNAVTTALSSAAAQFPFDIIPTLLQGLATLSTQYTQLMGQLINA 239 QAAA + A N TA S+A+ P+ G A L+ Y M L N Sbjct 181 PMQAAAV-SSAASTPAANVAQTAASAASTTLPYS---GPFSGPANLAYLYQTFMTNLFNT 236 Query 240 IFGPTGATTYQNVFVTAANVTKFSTWANDAMSAPNLGMTEFKVFWQPPPAPEIPKSSLGA 299 + P GA+ Y +++ +T N N ++++ F P +PK +LGA Sbjct 237 V--PGGASFYTSMYNAVKVPLGLTTQFNGVGLLVNFPLSQWLKFAPPIGYGALPKDALGA 294 Query 300 GLGLRSGLSAGLAHAAS--AGLGQA-NLVGDLSVPPSWASATPAVRLVANTLPATSLAAA 356 GLG L A S AG+G A LVG LS+PPSWA+ATP++R VA L A A Sbjct 295 GLGALGFGRGTLYSAISPVAGMGNAGTLVGKLSIPPSWATATPSIRTVAAALSAAGAEAV 354 Query 357 PATQI-PANLLGQMALGSMTGGALGAAAPAIYTGSGARARANGGTPSAE---PVKLEAVI 412 PA + +L M L M G A+G+ P + G G R R + P +L+ ++ Sbjct 355 PAAALGEGSLFSSMGLAGMLGSAVGSGGPTMVRG-GVRNRMTAIKDLKDKQSPEQLKRLV 413 Query 413 AQLQKQPDAVRHWNVDKADLDGLLDRLSKQPGIHAVHVSNGDKPKVALPDTQLG 466 AQ+ +QP++V+H NVD+ +LD LL++L+K+PGIHAVH+ GDK KV D QLG Sbjct 414 AQISEQPESVQHHNVDQENLDTLLEQLAKKPGIHAVHLKKGDKSKVLPADAQLG 467 >gi|240173095|ref|ZP_04751753.1| PPE family protein, PPE30 [Mycobacterium kansasii ATCC 12478] Length=358 Score = 256 bits (654), Expect = 5e-66, Method: Compositional matrix adjust. Identities = 171/368 (47%), Positives = 216/368 (59%), Gaps = 25/368 (6%) Query 114 RSQLISLVATNIFGQNTAAIAATEAEYGEMWAQDTMAMFGYASSSATASRLTPFTAPPQT 173 RSQL +LVATNIFGQNT AIAATEA+YG+MW QD +AM YA SSA A +LTPFT PPQ Sbjct 1 RSQLATLVATNIFGQNTPAIAATEAQYGQMWVQDAVAMDSYAGSSAAAGQLTPFTEPPQV 60 Query 174 TNPSGLAGQAAATGQATALASGTNAVTTALSSAAAQFPFDIIPTLLQGLATLSTQYTQLM 233 N + AA A S A + L+SA D I LLQ A L+T YT+ M Sbjct 61 VN-AAGLAGQAAAAGQAAGTSAGTAAQSILASA------DPISWLLQLGADLATAYTKAM 113 Query 234 GQLINAIFGPTGATTYQNVFVTAANVTKFSTWANDAMSAPNLGMTEFKVFWQPPPA---P 290 L+N IFGPT A Y +F+ F+T ND N +++F F A Sbjct 114 NDLVNGIFGPTAAADYIRLFLAVRGPLGFTTGFNDIGLLVNFPVSQFLKFGPHAAAGGLG 173 Query 291 EIPKSSLGAGLGL-----RSGLSAGLAHAASAGLGQANLVGDLSVPPSWASATPAVRLVA 345 E PK LGAGLGL R L++ + +A G+ LVG LSVPPSWA+ATPA+R VA Sbjct 174 EFPKEGLGAGLGLAPHWGRGWLTSATSGDVTAHWGRGTLVGSLSVPPSWATATPAIRTVA 233 Query 346 NTLPATSLAAAPATQI-PANLLGQMALGSMTGGALGAAAPAIYTGSGARARANGGTPSAE 404 L A A PA + LL AL M G ALGA AP+ +G+G R R TP + Sbjct 234 AALSAAGPEAVPAAALGEGGLLSSTALAGMLGSALGAGAPSAVSGTGVRGRI---TPFKD 290 Query 405 ------PVKLEAVIAQLQKQPDAVRHWNVDKADLDGLLDRLSKQPGIHAVHVSNGDKPKV 458 P KL+ ++AQ+ ++P++V+H +VD LD LL++L+K+PGIHAVH+S GDKPKV Sbjct 291 LKDATSPDKLKRLVAQISEKPESVQHHSVDPEGLDSLLEQLAKKPGIHAVHLSKGDKPKV 350 Query 459 ALPDTQLG 466 D+QLG Sbjct 351 VPSDSQLG 358 >gi|183981478|ref|YP_001849769.1| PPE family protein [Mycobacterium marinum M] gi|183174804|gb|ACC39914.1| PPE family protein [Mycobacterium marinum M] Length=427 Score = 253 bits (646), Expect = 5e-65, Method: Compositional matrix adjust. Identities = 185/400 (47%), Positives = 234/400 (59%), Gaps = 33/400 (8%) Query 1 MDFGLQPPEITSGEMYLGPGAGPMLAAAVAWDGLAAELQSMAASYASIVEGMASESWLGP 60 MDFG PPEI SG MY+GPG+GPMLAAAV WD LAAEL + AA Y S ++G+ SW GP Sbjct 1 MDFGALPPEINSGRMYVGPGSGPMLAAAVVWDELAAELYATAAGYRSTLDGLTGGSWRGP 60 Query 61 SSAGMAAAAAPYVTWMSGTSAQAKAAADQARAAVVAYETAFAAVVPPPQIAANRSQLISL 120 +SA MAAAAAPYV WM+ T+AQA+ A QA+ A AYETAFAA VPPP IAANR+ L+ L Sbjct 61 ASASMAAAAAPYVAWMTATAAQAELAGSQAKVAASAYETAFAATVPPPVIAANRALLMGL 120 Query 121 VATNIFGQNTAAIAATEAEYGEMWAQDTMAMFGYASSSATASRLTPFTAPPQTTNPSGLA 180 V TNIFGQNT AIAATEA Y EMWAQD AM+ YA SSATA+++TPFT PPQ T+PSG Sbjct 121 VFTNIFGQNTPAIAATEAHYAEMWAQDAAAMYAYAGSSATATQVTPFTEPPQITSPSGAV 180 Query 181 GQAAATGQATALASGTNAVTTALSSAAAQFPFDIIPTLLQGLATLSTQYTQLMGQLINAI 240 QAAA +A ++ ++ +T LS A ++P LQG+AT + G A+ Sbjct 181 SQAAAVTEAATASASSD-ITAQLSPLIA-----VVPNALQGMATSGNPAAAIAGLPDVAL 234 Query 241 FGPTGATTYQNVFVTAANVTK--FST-----------WANDAMSAPNLGMTEFKVFWQPP 287 P G T F T + F+ A + A + M + F+ P Sbjct 235 --PAGIITDLQNFTTILDTLDGPFTIQGLTGVPGGPFLAFGQVYAFSQNMVGAQAFFSPA 292 Query 288 P------APEIPKSSLGAGLGLRSGLSAGLAHAASAGLGQANLVGDLSVPPSWASATPAV 341 AP +++LGA + AS +G A LVG++SVP W PA+ Sbjct 293 EPVIGGLAPLAGEANLGAA---GVVGGPSVGGQASGAMGHAALVGNMSVPQGWTQEAPAI 349 Query 342 RLVANTLPATSLAAAPATQIPAN--LLGQMALGSMTGGAL 379 R+ + LP TS+ AAPA + + QMAL S+ G AL Sbjct 350 RVFVSELP-TSVTAAPAATLAGESAVFNQMALSSLAGRAL 388 >gi|212596561|gb|ACJ35588.1| PPE19 [Mycobacterium intracellulare ATCC 13950] Length=475 Score = 251 bits (640), Expect = 3e-64, Method: Compositional matrix adjust. Identities = 212/474 (45%), Positives = 271/474 (58%), Gaps = 15/474 (3%) Query 1 MDFGLQPPEITSGEMYLGPGAGPMLAAAVAWDGLAAELQSMAASYASIVEGMASESWLGP 60 M +G PPE SG MY GPGAG ++AAA AW LA ELQS A SYA+ + + + W GP Sbjct 9 MFYGAFPPEFNSGRMYSGPGAGSLVAAATAWQSLATELQSTATSYAATISSLTAGPWAGP 68 Query 61 SSAGMAAAAAPYVTWMSGTSAQAKAAADQARAAVVAYETAFAAVVPPPQIAANRSQLISL 120 SS MA+AAAPYV WM T+A A +A QA A AYETAFAA VPP IA NR+ L L Sbjct 69 SSLAMASAAAPYVAWMQQTAAAAAQSATQATEAAAAYETAFAAHVPPAVIAENRALLAQL 128 Query 121 VATNIFGQNTAAIAATEAEYGEMWAQDTMAMFGYASSSATAS-RLTPFTAPPQTTNPSGL 179 VATN+FGQNT+AIAA EA+YGE WAQD AM Y +SSATAS +LT F PQTTN + Sbjct 129 VATNLFGQNTSAIAANEAQYGEFWAQDATAMDTYFASSATASNKLTEFGPAPQTTN-AAA 187 Query 180 AGQAAATGQATALASGTNAVTTALSSAAAQFPFDIIPTLLQGLATLSTQYTQLMGQLINA 239 AA + A N A ++A P+ G A L+ Y M L N Sbjct 188 EPMQAAAVTSAASTPAANVANAAATAATTTLPYS---GPFSGAANLAYLYQTFMTNLFNT 244 Query 240 IFGPTGATTYQNVFVTAANVTKFSTWANDAMSAPNLGMTEFKVFWQPPPAPEIPKSSLGA 299 + P GA+ Y ++ +T ND N ++++ F P +PK +LGA Sbjct 245 V--PGGASFYTAMYNAVKVPLGLTTQFNDVGLLVNFPLSQWLKFAPPIAYGALPKDALGA 302 Query 300 GLGLRSGLSAGLAHAAS--AGLGQA-NLVGDLSVPPSWASATPAVRLVANTLPATSLAAA 356 GLG L A + AG+G A LVG LS+PPSWA+ATP+VR VA L A A Sbjct 303 GLGALGFGRGTLYSAINPIAGMGNAGTLVGKLSIPPSWATATPSVRTVAAALSAAGTEAV 362 Query 357 PATQI-PANLLGQMALGSMTGGALGAAAPAIYTGSGARAR---ANGGTPSAEPVKLEAVI 412 PA + +L M L M G LG+ AP + G G R R P +L+ ++ Sbjct 363 PAAALGEGSLFSSMGLAGMLGSGLGSGAPTVVRG-GVRNRMAAIKDLKDKQSPEQLKRLV 421 Query 413 AQLQKQPDAVRHWNVDKADLDGLLDRLSKQPGIHAVHVSNGDKPKVALPDTQLG 466 AQ+ ++P++V+H NVD+ +LD LL++L+K+PGIHAVH+ GDK KV D QLG Sbjct 422 AQISEKPESVQHHNVDQENLDALLEQLAKKPGIHAVHLKKGDKSKVLPTDAQLG 475 >gi|254823261|ref|ZP_05228262.1| hypothetical protein MintA_25249 [Mycobacterium intracellulare ATCC 13950] Length=467 Score = 250 bits (639), Expect = 3e-64, Method: Compositional matrix adjust. Identities = 212/474 (45%), Positives = 271/474 (58%), Gaps = 15/474 (3%) Query 1 MDFGLQPPEITSGEMYLGPGAGPMLAAAVAWDGLAAELQSMAASYASIVEGMASESWLGP 60 M +G PPE SG MY GPGAG ++AAA AW LA ELQS A SYA+ + + + W GP Sbjct 1 MFYGAFPPEFNSGRMYSGPGAGSLVAAATAWQSLATELQSTATSYAATISSLTAGPWAGP 60 Query 61 SSAGMAAAAAPYVTWMSGTSAQAKAAADQARAAVVAYETAFAAVVPPPQIAANRSQLISL 120 SS MA+AAAPYV WM T+A A +A QA A AYETAFAA VPP IA NR+ L L Sbjct 61 SSLAMASAAAPYVAWMQQTAAAAAQSATQATEAAAAYETAFAAHVPPAVIAENRALLAQL 120 Query 121 VATNIFGQNTAAIAATEAEYGEMWAQDTMAMFGYASSSATAS-RLTPFTAPPQTTNPSGL 179 VATN+FGQNT+AIAA EA+YGE WAQD AM Y +SSATAS +LT F PQTTN + Sbjct 121 VATNLFGQNTSAIAANEAQYGEFWAQDATAMDTYFASSATASNKLTEFGPAPQTTN-AAA 179 Query 180 AGQAAATGQATALASGTNAVTTALSSAAAQFPFDIIPTLLQGLATLSTQYTQLMGQLINA 239 AA + A N A ++A P+ G A L+ Y M L N Sbjct 180 EPMQAAAVTSAASTPAANVANAAATAATTTLPYS---GPFSGAANLAYLYQTFMTNLFNT 236 Query 240 IFGPTGATTYQNVFVTAANVTKFSTWANDAMSAPNLGMTEFKVFWQPPPAPEIPKSSLGA 299 + P GA+ Y ++ +T ND N ++++ F P +PK +LGA Sbjct 237 V--PGGASFYTAMYNAVKVPLGLTTQFNDVGLLVNFPLSQWLKFAPPIAYGALPKDALGA 294 Query 300 GLGLRSGLSAGLAHAAS--AGLGQA-NLVGDLSVPPSWASATPAVRLVANTLPATSLAAA 356 GLG L A + AG+G A LVG LS+PPSWA+ATP+VR VA L A A Sbjct 295 GLGALGFGRGTLYSAINPIAGMGNAGTLVGKLSIPPSWATATPSVRTVAAALSAAGTEAV 354 Query 357 PATQI-PANLLGQMALGSMTGGALGAAAPAIYTGSGARAR---ANGGTPSAEPVKLEAVI 412 PA + +L M L M G LG+ AP + G G R R P +L+ ++ Sbjct 355 PAAALGEGSLFSSMGLAGMLGSGLGSGAPTVVRG-GVRNRMAAIKDLKDKQSPEQLKRLV 413 Query 413 AQLQKQPDAVRHWNVDKADLDGLLDRLSKQPGIHAVHVSNGDKPKVALPDTQLG 466 AQ+ ++P++V+H NVD+ +LD LL++L+K+PGIHAVH+ GDK KV D QLG Sbjct 414 AQISEKPESVQHHNVDQENLDALLEQLAKKPGIHAVHLKKGDKSKVLPTDAQLG 467 >gi|212596610|gb|ACJ35592.1| PPE28 [Mycobacterium intracellulare ATCC 13950] Length=456 Score = 248 bits (634), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 212/469 (46%), Positives = 280/469 (60%), Gaps = 21/469 (4%) Query 2 DFGLQPPEITSGEMYLGPGAGPMLAAAVAWDGLAAELQSMAASYASIVEGMASESWLGPS 61 DF PPE+ S ++Y GPGA PML+AA AW LAAEL S A+SY + + + E W GPS Sbjct 5 DFAALPPEVISTQLYAGPGAAPMLSAAAAWQALAAELHSTASSYGAAISELIGEDWQGPS 64 Query 62 SAGMAAAAAPYVTWMSGTSAQAKAAADQARAAVVAYETAFAAVVPPPQIAANRSQLISLV 121 S MA+AAAPYV W+S T+ A+ A QA+AA AYE A A+VVPP IA NR+QL +L Sbjct 65 SDSMASAAAPYVNWISTTAGLAEQTAAQAQAAASAYEAALASVVPPALIADNRTQLAALQ 124 Query 122 ATNIFGQNTAAIAATEAEYGEMWAQDTMAMFGYASSSATASRLTPFTAPPQTTNPSGLAG 181 ATN+ GQN AAIAATEAEY +MW+QD AMFGYA++S +A L PF P Sbjct 125 ATNLLGQNGAAIAATEAEYAQMWSQDVTAMFGYAAASQSAGELAPFEQAP---------- 174 Query 182 QAAATGQATALASGTNAVTTALSSAAAQFPFDIIPTLLQGLATLSTQYTQLMGQLINAIF 241 A + +G+ A + ++AA+ + L + +L+T YTQ +LI + Sbjct 175 -------AVSKDTGSAAQASTTAAAASSSSSSWMQQLQDYVNSLTTGYTQSWQKLIEGMT 227 Query 242 GPTG-ATTYQNVFVTAANVTKFSTWANDAMSAPNLGMTEFK-VFWQPPPAPEIPKSSLGA 299 G A ++ +F + V +TW N ++ LG++E+K F P + +PK+SLGA Sbjct 228 GSKEVAPLWEALFSSVKGVGGQATWTNVVGASGGLGVSEWKGAFVYAPWSAGLPKASLGA 287 Query 300 GLGLRSGLSAGL-AHAASAGLGQANLVGDLSVPPSWASATPAVRLVANTLPATSLAAAPA 358 GL GL AG+ SA LG A VG LSVP SWA+A PA+RL + LPATS AAA A Sbjct 288 GLASPGGLGAGVPVRPVSAVLGTAPTVGKLSVPSSWATAAPAIRLASTALPATSAAAAAA 347 Query 359 TQIPANLLGQ-MALGSMTGGALGAAAPAIYTGSGARARANGGTPSAEPVKLEAVIAQLQK 417 PA L+ G G AA I T +G + RA G +PVKL+ +IAQLQ+ Sbjct 348 AGFPAELVNDATLGSLAGGALGGPAARVINTTTGIQTRAIAGQRRTQPVKLDRIIAQLQE 407 Query 418 QPDAVRHWNVDKADLDGLLDRLSKQPGIHAVHVSNGDKPKVALPDTQLG 466 PD V+HWNVD+A LD L+ +L PG+HAVHV++ P A P++QLG Sbjct 408 MPDQVQHWNVDEAGLDDLVAQLRTTPGVHAVHVNDEPTPAAAHPESQLG 456 >gi|289750373|ref|ZP_06509751.1| PPE family protein [Mycobacterium tuberculosis T92] gi|289690960|gb|EFD58389.1| PPE family protein [Mycobacterium tuberculosis T92] Length=360 Score = 245 bits (625), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 165/367 (45%), Positives = 222/367 (61%), Gaps = 26/367 (7%) Query 105 VPPPQIAANRSQLISLVATNIFGQNTAAIAATEAEYGEMWAQDTMAMFGYASSSATASRL 164 +PPP +A NR++L L ATNIFGQNT AIAA EA Y EMWAQD AM+GYA SS+ A+++ Sbjct 1 MPPPVVATNRAELAVLAATNIFGQNTGAIAAAEARYAEMWAQDAAAMYGYAGSSSVATQV 60 Query 165 TPFTAPPQTTNPSGLAGQAAATGQATALASGTNAVTTALSSAAAQFPFDIIPTLLQGLAT 224 TPF APP TTN +GLA Q A QA ++G NA + ++ +L+ LAT Sbjct 61 TPFAAPPPTTNAAGLATQGVAVAQAVGASAG-NARS-------------LVSEVLEFLAT 106 Query 225 LSTQYTQLMGQLINAIFG-PTGATTYQNVFVTAANVTKFSTWANDAMSAPNLGMTEFKVF 283 T Y + + L+NA+ G P ++ Y ++ +K AND + + GM +F+ F Sbjct 107 AGTNYNKTVASLMNAVTGVPYASSVYNSMLGLGFAESKMVLPANDTVISTIFGMVQFQKF 166 Query 284 WQP--PPAPE-IPKSSLGAGLGLRSGLSAGL---AHAASAGLGQANLVGDLSVPPSWASA 337 + P P P+ IPKS+LGAGLGLRS +S+GL A A SAG QA VG +SVPPSWA+A Sbjct 167 FNPVTPFNPDLIPKSALGAGLGLRSAISSGLGSTAPAISAGASQAGSVGGMSVPPSWAAA 226 Query 338 TPAVRLVANTLPATSLAAAPATQI-PANLLGQMALGSM---TGGALGAAAPAIYTGSG-A 392 TPA+R VA +T L A PA I +LL QMAL S+ G A A + G G Sbjct 227 TPAIRTVAAVFSSTGLQAVPAAAISEGSLLSQMALASVAGGALGGAAARATGGFLGGGRV 286 Query 393 RARANGGTPSAEPVKLEAVIAQLQKQPDAVRHWNVDKADLDGLLDRLSKQPGIHAVHVSN 452 A S P KL V+A + ++P++V+HW+ D+ LD LL L K+PGIHAVH++ Sbjct 287 TAVKKSLKDSDSPDKLRRVVAHMMEKPESVQHWHTDEDGLDDLLAELKKKPGIHAVHMAG 346 Query 453 GDKPKVA 459 G+K ++A Sbjct 347 GNKAEIA 353 >gi|254822973|ref|ZP_05227974.1| PPE family protein [Mycobacterium intracellulare ATCC 13950] Length=435 Score = 237 bits (605), Expect = 3e-60, Method: Compositional matrix adjust. Identities = 216/451 (48%), Positives = 267/451 (60%), Gaps = 24/451 (5%) Query 24 MLAAAVAWDGLAAELQSMAASYASIVEGMASESWLGPSSAGMAAAAAPYVTWMSGTSAQA 83 MLAAA AWDGLAA+L S A SY S++ + S W GPSS MA AAAPY WMS T+AQA Sbjct 1 MLAAASAWDGLAAQLHSAATSYESVISNLTS-GWQGPSSLTMAGAAAPYAAWMSTTAAQA 59 Query 84 KAAADQARAAVVAYETAFAAVVPPPQIAANRSQLISLVATNIFGQNTAAIAATEAEYGEM 143 + AA +ARAA AYE AF A VPP IA NR +L SLVATN+ GQNTAAIAATEAEY +M Sbjct 60 EQAASRARAAAAAYEAAFTATVPPVAIAENRGRLASLVATNLLGQNTAAIAATEAEYAQM 119 Query 144 WAQDTMAMFGYASSSATASRLTPFTAPPQTTNPSGLAGQAAATGQA--TALASGTNAVTT 201 WAQD AM+GYA SSA A++L PF APPQTTNP+G AGQ+ A QA TA A+ +A+ Sbjct 120 WAQDAAAMYGYAGSSAIAAQLEPFNAPPQTTNPAGGAGQSGAVAQAAGTAPANAQSALAQ 179 Query 202 ALSSAAAQFPFDIIPTLLQGLAT---LSTQYTQLMGQLINAIFGPTGATTYQNVFVTAAN 258 +SS P LQ A+ L + +N + +T + Sbjct 180 LMSS---------TPRTLQSFASPSALPAADPSSLATWLNNL----NSTPLAKIAANIEF 226 Query 259 VTKFSTWANDAMSAPNLGMTEFKVFWQPPPAPEIPKSSLGAGLGLRS-GLSAGLAHAASA 317 VTK ND + + +LG+ W A E+ + L A LG + A A A +A Sbjct 227 VTKGIRPVNDTLLSLSLGLVATARTWG-DTAVEL-EGPLFASLGSSTPAAGAVGASAVTA 284 Query 318 GLGQANLVGDLSVPPSWASATPAVRLVANTLPATSLAAAPATQIPANLLGQMALGSMTGG 377 GLG A L G LSVPPSWA A+PAV+L A L TS AAP A LGQM L + GG Sbjct 285 GLGNAGLAGALSVPPSWAVASPAVKLAATVLEYTSAGAAPTVAAGAGALGQMGLAGLAGG 344 Query 378 ALGAAAPAIYTGSGAR--ARANGGTPSAEPVKLEAVIAQLQKQPDAVRHWNVDKADLDGL 435 ALG A P S R R + P KL+ V+A+LQ+ P++V+HW+ DKA L+ L Sbjct 345 ALGGAVPRAVAASPTRGLGRRSSDNDDKTPDKLKTVLAELQEAPESVQHWHTDKAHLESL 404 Query 436 LDRLSKQPGIHAVHVSNGDKPKVALPDTQLG 466 LD+LSK+PG+HAVH+S+ DK K P G Sbjct 405 LDQLSKKPGVHAVHLSSADKSKATPPRATWG 435 >gi|342859619|ref|ZP_08716272.1| PPE family protein [Mycobacterium colombiense CECT 3035] gi|342132751|gb|EGT85971.1| PPE family protein [Mycobacterium colombiense CECT 3035] Length=458 Score = 236 bits (603), Expect = 5e-60, Method: Compositional matrix adjust. Identities = 163/344 (48%), Positives = 201/344 (59%), Gaps = 25/344 (7%) Query 1 MDFGLQPPEITSGEMYLGPGAGPMLAAAVAWDGLAAELQSMAASYASIVEGMASESWLGP 60 MDF + PPE+ S MY GPG+GPMLAAA+AWD +AA LQ+ A SY + + + S W+GP Sbjct 1 MDFAVLPPEVNSARMYAGPGSGPMLAAAMAWDEVAAALQTTANSYQAEITALTSGPWVGP 60 Query 61 SSAGMAAAAAPYVTWMSGTSAQAKAAADQARAAVVAYETAFAAVVPPPQIAANRSQLISL 120 SSA M AA PY+ WM AQA+ A+QAR A AYETAFA VPPP + ANR+QL +L Sbjct 61 SSAAMVAAITPYLEWMRTAGAQAEETANQARTAAFAYETAFAETVPPPVVTANRTQLAAL 120 Query 121 VATNIFGQNTAAIAATEAEYGEMWAQDTMAMFGYASSSATASRLTPFTAPPQTTNPSGLA 180 VATN+ GQNT AIAATEAEYGEMWA+DT AMFGYA ++A+A+RLTPF+ P T+N SG A Sbjct 121 VATNVLGQNTPAIAATEAEYGEMWARDTAAMFGYAGTTASATRLTPFSQPDPTSN-SG-A 178 Query 181 GQAAATGQA-TALASGTNAVTTALS------SAAAQFPFDIIPTLLQGLATLSTQYTQLM 233 GQ+ A QA TA S N V + S S AA P I PT L L + + Sbjct 179 GQSEAVAQAGTAAGSTRNTVQQSFSAVPNLLSNAALSPAAISPTSATDLLGLESDLIAIF 238 Query 234 GQLINAIFG---PTGATTYQNVFVTAANVTKFSTWANDAMSAPNLGMTEFKVFWQPPPAP 290 ++ G T F A +T F T D + + G+ + PP+P Sbjct 239 LDAPASVAGLGIDAPGTLVALPFDVAGALTGFHT---DDIVSGWAGVQAWPGTGAVPPSP 295 Query 291 EIPKSSLGAGLGLRSGLSAGLAHAASAGLGQANLVGDLSVPPSW 334 P + AG G ASAGLGQA+ VG LSVPP W Sbjct 296 -FPVITNPAG---------GFGTLASAGLGQASTVGGLSVPPGW 329 >gi|240169716|ref|ZP_04748375.1| PPE family protein [Mycobacterium kansasii ATCC 12478] Length=453 Score = 233 bits (595), Expect = 4e-59, Method: Compositional matrix adjust. Identities = 187/381 (50%), Positives = 235/381 (62%), Gaps = 48/381 (12%) Query 1 MDFGLQPPEITSGEMYLGPGAGPMLAAAVAWDGLAAELQSMAASYASIVEGMASESWLGP 60 MDFG PPEI SG MY GPG+GPM+AAA +WD +AAEL+SM Y +++ + S+ W GP Sbjct 1 MDFGALPPEINSGRMYAGPGSGPMMAAATSWDMIAAELRSMGTVYQAVISALTSQGWRGP 60 Query 61 SSAGMAAAAAPYVTWMSGTSAQAKAAADQARAAVVAYETAFAAVVPPPQIAANRSQLISL 120 +SA M AA PY+ W+S TSAQA+ A QA+AA A+ETAF VPPP IAANR+QL +L Sbjct 61 ASAAMLGAAEPYIAWLSATSAQAEQTATQAKAAAAAFETAFMMTVPPPVIAANRAQLAAL 120 Query 121 VATNIFGQNTAAIAATEAEYGEMWAQDTMAMFGYASSSATASRLTPFTAPPQTTNPSGLA 180 V TN FGQNTAAIAATEA+YGEMWAQD AM+GYASSSATA+++TPFTAPP TTNP+GLA Sbjct 121 VTTNFFGQNTAAIAATEAQYGEMWAQDATAMYGYASSSATAAKVTPFTAPPPTTNPAGLA 180 Query 181 GQAAATGQATALASGTNAVTTALSSAAAQFPFDIIPTLLQGLATLS----------TQYT 230 GQA A A + A+G++ + LSS +P LQGLA+ + Sbjct 181 GQAGAVAHAASTAAGSH--SQLLSS---------MPAALQGLASPMAAAPSPPSPLSMLK 229 Query 231 QLMGQLINAIFGPTGATTYQNVFVTAANVTKFSTWANDAMSAPNLGMT----------EF 280 L L A+ G A T + V N+ ST N+G+T + Sbjct 230 MLETALSIAVSGTAAALTATAIPVVLTNIGLVST---------NIGLTSQSIQQKEQQQQ 280 Query 281 KVFWQPPPAPEIPKSSLGAGLGLRSGLSAGLAHAASAGLGQANLVGDLSVPPSWASATPA 340 + + PPAP + G+G L SG SA A A AG+GQAN+VG L+VPPSW +A P Sbjct 281 RQQSRTPPAP-----TSGSGSRLLSGGSA--ASNAEAGVGQANVVGALAVPPSWTAAAP- 332 Query 341 VRLVANTLPATSLAAAPATQI 361 VRL+ L L+AAPA I Sbjct 333 VRLLTAALRDAGLSAAPAASI 353 >gi|289761952|ref|ZP_06521330.1| PPE family protein [Mycobacterium tuberculosis GM 1503] gi|289709458|gb|EFD73474.1| PPE family protein [Mycobacterium tuberculosis GM 1503] Length=389 Score = 233 bits (593), Expect = 6e-59, Method: Compositional matrix adjust. Identities = 160/358 (45%), Positives = 215/358 (61%), Gaps = 26/358 (7%) Query 114 RSQLISLVATNIFGQNTAAIAATEAEYGEMWAQDTMAMFGYASSSATASRLTPFTAPPQT 173 R++L L ATNIFGQNT AIAA EA Y EMWAQD AM+GYA SS+ A+++TPF APP T Sbjct 39 RAELAVLAATNIFGQNTGAIAAAEARYAEMWAQDAAAMYGYAGSSSVATQVTPFAAPPPT 98 Query 174 TNPSGLAGQAAATGQATALASGTNAVTTALSSAAAQFPFDIIPTLLQGLATLSTQYTQLM 233 TN +GLA Q A QA ++G NA + ++ +L+ LAT T Y + + Sbjct 99 TNAAGLATQGVAVAQAVGASAG-NARS-------------LVSEVLEFLATAGTNYNKTV 144 Query 234 GQLINAIFG-PTGATTYQNVFVTAANVTKFSTWANDAMSAPNLGMTEFKVFWQP--PPAP 290 L+NA+ G P ++ Y ++ +K AND + + GM +F+ F+ P P P Sbjct 145 ASLMNAVTGVPYASSVYNSMLGLGFAESKMVLPANDTVISTIFGMVQFQKFFNPVTPFNP 204 Query 291 E-IPKSSLGAGLGLRSGLSAGL---AHAASAGLGQANLVGDLSVPPSWASATPAVRLVAN 346 + IPKS+LGAGLGLRS +S+GL A A SAG QA VG +SVPPSWA+ATPA+R VA Sbjct 205 DLIPKSALGAGLGLRSAISSGLGSTAPAISAGASQAGSVGGMSVPPSWAAATPAIRTVAA 264 Query 347 TLPATSLAAAPATQI-PANLLGQMALGSM---TGGALGAAAPAIYTGSG-ARARANGGTP 401 +T L A PA I +LL QMAL S+ G A A + G G A Sbjct 265 VFSSTGLQAVPAAAISEGSLLSQMALASVAGGALGGAAARATGGFLGGGRVTAVKKSLKD 324 Query 402 SAEPVKLEAVIAQLQKQPDAVRHWNVDKADLDGLLDRLSKQPGIHAVHVSNGDKPKVA 459 S P KL V+A + ++P++V+HW+ D+ LD LL L K+PGIHAVH++ G+K ++A Sbjct 325 SDSPDKLRRVVAHMMEKPESVQHWHTDEDGLDDLLAELKKKPGIHAVHMAGGNKAEIA 382 >gi|31792997|ref|NP_855490.1| PPE family protein [Mycobacterium bovis AF2122/97] gi|121637710|ref|YP_977933.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224990194|ref|YP_002644881.1| PPE family protein [Mycobacterium bovis BCG str. Tokyo 172] 29 more sequence titles Length=409 Score = 231 bits (589), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 192/392 (49%), Positives = 235/392 (60%), Gaps = 31/392 (7%) Query 1 MDFGLQPPEITSGEMYLGPGAGPMLAAAVAWDGLAAELQSMAASYASIVEGMASESWLGP 60 MDFG PPEI SG MY GPG+GP+LAAA AWD LAAEL S AASY S +EG+ W+GP Sbjct 1 MDFGALPPEINSGRMYAGPGSGPLLAAAAAWDALAAELYSAAASYGSTIEGLTVAPWMGP 60 Query 61 SSAGMAAAAAPYVTWMSGTSAQAKAAADQARAAVVAYETAFAAVVPPPQIAANRSQLISL 120 SS MAAA APYV W+S T+ QA+ A QA+ A YETAFAA VPPP I ANR+ L+SL Sbjct 61 SSITMAAAVAPYVAWISVTAGQAEQAGAQAKIAAGVYETAFAATVPPPVIEANRALLMSL 120 Query 121 VATNIFGQNTAAIAATEAEYGEMWAQDTMAMFGYASSSATASRLTPFTAPPQTTNPSGLA 180 VATNIFGQNT AIAATEA Y EMWAQD AM+GYA SSATAS+L PF+ PPQTTNPS A Sbjct 121 VATNIFGQNTPAIAATEAHYAEMWAQDAAAMYGYAGSSATASQLAPFSEPPQTTNPSATA 180 Query 181 GQAAATGQATALASGTNAVTTALSSAAAQFPFDIIPTLLQGLATLSTQYTQLMGQLINAI 240 Q+A QA A+ ++ +T LS ++P+ LQ LAT +T + G Sbjct 181 AQSAVVAQAAGAAASSD-ITAQLSQL-----ISLLPSTLQSLATTATATSASAGW----- 229 Query 241 FGPTGATTYQNVFVTAANVT-KFSTWANDAMSAPNLGMTEFKVFWQPPPAPEI-----PK 294 T Q++ AN+T +S A+ +T ++ AP + PK Sbjct 230 -----DTVLQSITTILANLTGPYSIIGLGAIPG-GWWLTFGQILGLAQNAPGVAALLGPK 283 Query 295 SSLGAGLG----LRSGLSAG---LAHAASAGLGQANLVGDLSVPPSWASATPAVRLVANT 347 ++ GA L LR G A L A+ G+ +A VG LSVP WA A P +R VA+ Sbjct 284 AAAGA-LSPLAPLRGGYIADITPLGGGATGGIARAIYVGSLSVPQGWAEAAPVMRAVASV 342 Query 348 LPATSLAAAPATQIPANLLGQMALGSMTGGAL 379 LP T A A A + P L G+MAL S+ G AL Sbjct 343 LPGTGAAPALAAEAPGALFGEMALSSLAGRAL 374 >gi|57116921|ref|YP_177844.1| PPE family protein [Mycobacterium tuberculosis H37Rv] gi|148661614|ref|YP_001283137.1| PPE family protein [Mycobacterium tuberculosis H37Ra] gi|148823021|ref|YP_001287775.1| PPE family protein [Mycobacterium tuberculosis F11] 9 more sequence titles Length=409 Score = 230 bits (586), Expect = 5e-58, Method: Compositional matrix adjust. Identities = 191/392 (49%), Positives = 234/392 (60%), Gaps = 31/392 (7%) Query 1 MDFGLQPPEITSGEMYLGPGAGPMLAAAVAWDGLAAELQSMAASYASIVEGMASESWLGP 60 MDFG PPEI SG MY GPG+GP+LAAA AWD LAAEL S AASY S +EG+ W+GP Sbjct 1 MDFGALPPEINSGRMYAGPGSGPLLAAAAAWDALAAELYSAAASYGSTIEGLTVAPWMGP 60 Query 61 SSAGMAAAAAPYVTWMSGTSAQAKAAADQARAAVVAYETAFAAVVPPPQIAANRSQLISL 120 SS MAAA APYV W+S T+ QA+ A QA+ A YETAFAA VPPP I ANR+ L+SL Sbjct 61 SSITMAAAVAPYVAWISVTAGQAEQAGAQAKIAAGVYETAFAATVPPPVIEANRALLMSL 120 Query 121 VATNIFGQNTAAIAATEAEYGEMWAQDTMAMFGYASSSATASRLTPFTAPPQTTNPSGLA 180 VATNIFGQNT AIAATEA Y EMWAQD AM+GYA SSATAS+L PF+ PPQTTNPS A Sbjct 121 VATNIFGQNTPAIAATEAHYAEMWAQDAAAMYGYAGSSATASQLAPFSEPPQTTNPSATA 180 Query 181 GQAAATGQATALASGTNAVTTALSSAAAQFPFDIIPTLLQGLATLSTQYTQLMGQLINAI 240 Q+A QA A+ ++ +T LS ++P+ LQ LAT +T + G Sbjct 181 AQSAVVAQAAGAAASSD-ITAQLSQL-----ISLLPSTLQSLATTATATSASAGW----- 229 Query 241 FGPTGATTYQNVFVTAANVT-KFSTWANDAMSAPNLGMTEFKVFWQPPPAPEI-----PK 294 T Q++ AN+T +S A+ +T ++ AP + PK Sbjct 230 -----DTVLQSITTILANLTGPYSIIGLGAIPG-GWWLTFGQILGLAQNAPGVAALLGPK 283 Query 295 SSLGAGLG----LRSGLSAG---LAHAASAGLGQANLVGDLSVPPSWASATPAVRLVANT 347 ++ GA L LR G L A+ G+ +A VG LSVP WA A P +R VA+ Sbjct 284 AAAGA-LSPLAPLRGGYIGDITPLGGGATGGIARAIYVGSLSVPQGWAEAAPVMRAVASV 342 Query 348 LPATSLAAAPATQIPANLLGQMALGSMTGGAL 379 LP T A A A + P L G+MAL S+ G AL Sbjct 343 LPGTGAAPALAAEAPGALFGEMALSSLAGRAL 374 >gi|294996719|ref|ZP_06802410.1| PPE family protein [Mycobacterium tuberculosis 210] gi|13377907|gb|AAK20893.1| Rv1808-like protein [Mycobacterium microti] gi|13377909|gb|AAK20894.1| Rv1808-like protein [Mycobacterium microti] gi|339294744|gb|AEJ46855.1| PPE family protein [Mycobacterium tuberculosis CCDC5079] gi|339298372|gb|AEJ50482.1| PPE family protein [Mycobacterium tuberculosis CCDC5180] Length=410 Score = 230 bits (586), Expect = 5e-58, Method: Compositional matrix adjust. Identities = 191/392 (49%), Positives = 235/392 (60%), Gaps = 31/392 (7%) Query 1 MDFGLQPPEITSGEMYLGPGAGPMLAAAVAWDGLAAELQSMAASYASIVEGMASESWLGP 60 +DFG PPEI SG MY GPG+GP+LAAA AWD LAAEL S AASY S +EG+ W+GP Sbjct 2 LDFGALPPEINSGRMYAGPGSGPLLAAAAAWDALAAELYSAAASYGSTIEGLTVAPWMGP 61 Query 61 SSAGMAAAAAPYVTWMSGTSAQAKAAADQARAAVVAYETAFAAVVPPPQIAANRSQLISL 120 SS MAAA APYV W+S T+ QA+ A QA+ A YETAFAA VPPP I ANR+ L+SL Sbjct 62 SSITMAAAVAPYVAWISVTAGQAEQAGAQAKIAAGVYETAFAATVPPPVIEANRALLMSL 121 Query 121 VATNIFGQNTAAIAATEAEYGEMWAQDTMAMFGYASSSATASRLTPFTAPPQTTNPSGLA 180 VATNIFGQNT AIAATEA Y EMWAQD AM+GYA SSATAS+L PF+ PPQTTNPS A Sbjct 122 VATNIFGQNTPAIAATEAHYAEMWAQDAAAMYGYAGSSATASQLAPFSEPPQTTNPSATA 181 Query 181 GQAAATGQATALASGTNAVTTALSSAAAQFPFDIIPTLLQGLATLSTQYTQLMGQLINAI 240 Q+A QA A+ ++ +T LS ++P+ LQ LAT +T + G Sbjct 182 AQSAVVAQAAGAAASSD-ITAQLSQL-----ISLLPSTLQSLATTATATSASAGW----- 230 Query 241 FGPTGATTYQNVFVTAANVT-KFSTWANDAMSAPNLGMTEFKVFWQPPPAPEI-----PK 294 T Q++ AN+T +S A+ +T ++ AP + PK Sbjct 231 -----DTVLQSITTILANLTGPYSIIGLGAIPG-GWWLTFGQILGLAQNAPGVAALLGPK 284 Query 295 SSLGAGLG----LRSGLSAG---LAHAASAGLGQANLVGDLSVPPSWASATPAVRLVANT 347 ++ GA L LR G A L A+ G+ +A VG LSVP WA A P +R VA+ Sbjct 285 AAAGA-LSPLAPLRGGYIADITPLGGGATGGIARAIYVGSLSVPQGWAEAAPVMRAVASV 343 Query 348 LPATSLAAAPATQIPANLLGQMALGSMTGGAL 379 LP T A A A + P L G+MAL S+ G AL Sbjct 344 LPGTGAAPALAAEAPGALFGEMALSSLAGRAL 375 >gi|289447416|ref|ZP_06437160.1| PPE family protein [Mycobacterium tuberculosis CPHL_A] gi|289420374|gb|EFD17575.1| PPE family protein [Mycobacterium tuberculosis CPHL_A] Length=423 Score = 229 bits (585), Expect = 5e-58, Method: Compositional matrix adjust. Identities = 186/391 (48%), Positives = 227/391 (59%), Gaps = 22/391 (5%) Query 1 MDFGLQPPEITSGEMYLGPGAGPMLAAAVAWDGLAAELQSMAASYASIVEGMASESWLGP 60 MDFGL PPEI SG MY GPG GPMLAAA AWDGLA EL + AA YAS + + + +W GP Sbjct 1 MDFGLLPPEINSGRMYTGPGPGPMLAAATAWDGLAVELHATAAGYASELSAL-TGAWSGP 59 Query 61 SSAGMAAAAAPYVTWMSGTSAQAKAAADQARAAVVAYETAFAAVVPPPQIAANRSQLISL 120 SS MA+AAAPYV WMS T+ A+ A QAR A+ AYE AFAA VPPP IAANR+QL+ L Sbjct 60 SSTSMASAAAPYVAWMSATAVHAELAGAQARLAIAAYEAAFAATVPPPVIAANRAQLMGL 119 Query 121 VATNIFGQNTAAIAATEAEYGEMWAQDTMAMFGYASSSATASRLTPFTAPPQTTNPSGLA 180 +ATNIFGQNT AI TEA+Y EMWAQD AM+GYA SSATASR+T FT PPQTTN L Sbjct 120 IATNIFGQNTPAIMMTEAQYMEMWAQDAAAMYGYAGSSATASRMTAFTEPPQTTNHGQLG 179 Query 181 GQAAATGQATALASGTNAVTTALSSAAAQFPFDIIPTLLQGL--------ATLSTQYTQL 232 Q++A Q A A+G N L SA Q +P LQGL A+ + Q+ Sbjct 180 AQSSAVAQTAATAAGGN-----LQSAFPQL-LSAVPRALQGLALPTASQSASATPQWVTD 233 Query 233 MGQLINAIFGP-TGATTYQNVFVTAANVTKFSTWANDAMSAPNLGMTEF--KVFWQPPPA 289 +G L + G TG T+ V + + V + ++ G++ K+ +P Sbjct 234 LGNLSTFLGGAVTGPYTFPGV-LPPSGVPYLLGIQSVLVTQNGQGVSALLGKIGGKPITG 292 Query 290 PEIPKSSLGAGLGLRSGLSAGLAHAASAGLGQANLVGDLSVPPSWASATPAVRLVANTLP 349 P + + + SAG+G+A LVG LSVP W A P + A L Sbjct 293 ALAPLAEFALHTPILG-SEGLGGGSVSAGIGRAGLVGKLSVPQGWTVAAPEIPSPAAALQ 351 Query 350 ATSLAAAP--ATQIPANLLGQMALGSMTGGA 378 AT LAAAP AT P LLG MAL + G A Sbjct 352 ATRLAAAPIAATDGPGALLGGMALSGLAGRA 382 >gi|167967397|ref|ZP_02549674.1| PPE family protein [Mycobacterium tuberculosis H37Ra] gi|253799148|ref|YP_003032149.1| PPE family protein [Mycobacterium tuberculosis KZN 1435] gi|254231990|ref|ZP_04925317.1| PPE family protein [Mycobacterium tuberculosis C] 24 more sequence titles Length=410 Score = 228 bits (582), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 190/392 (49%), Positives = 234/392 (60%), Gaps = 31/392 (7%) Query 1 MDFGLQPPEITSGEMYLGPGAGPMLAAAVAWDGLAAELQSMAASYASIVEGMASESWLGP 60 +DFG PPEI SG MY GPG+GP+LAAA AWD LAAEL S AASY S +EG+ W+GP Sbjct 2 LDFGALPPEINSGRMYAGPGSGPLLAAAAAWDALAAELYSAAASYGSTIEGLTVAPWMGP 61 Query 61 SSAGMAAAAAPYVTWMSGTSAQAKAAADQARAAVVAYETAFAAVVPPPQIAANRSQLISL 120 SS MAAA APYV W+S T+ QA+ A QA+ A YETAFAA VPPP I ANR+ L+SL Sbjct 62 SSITMAAAVAPYVAWISVTAGQAEQAGAQAKIAAGVYETAFAATVPPPVIEANRALLMSL 121 Query 121 VATNIFGQNTAAIAATEAEYGEMWAQDTMAMFGYASSSATASRLTPFTAPPQTTNPSGLA 180 VATNIFGQNT AIAATEA Y EMWAQD AM+GYA SSATAS+L PF+ PPQTTNPS A Sbjct 122 VATNIFGQNTPAIAATEAHYAEMWAQDAAAMYGYAGSSATASQLAPFSEPPQTTNPSATA 181 Query 181 GQAAATGQATALASGTNAVTTALSSAAAQFPFDIIPTLLQGLATLSTQYTQLMGQLINAI 240 Q+A QA A+ ++ +T LS ++P+ LQ LAT +T + G Sbjct 182 AQSAVVAQAAGAAASSD-ITAQLSQL-----ISLLPSTLQSLATTATATSASAGW----- 230 Query 241 FGPTGATTYQNVFVTAANVT-KFSTWANDAMSAPNLGMTEFKVFWQPPPAPEI-----PK 294 T Q++ AN+T +S A+ +T ++ AP + PK Sbjct 231 -----DTVLQSITTILANLTGPYSIIGLGAIPG-GWWLTFGQILGLAQNAPGVAALLGPK 284 Query 295 SSLGAGLG----LRSGLSAG---LAHAASAGLGQANLVGDLSVPPSWASATPAVRLVANT 347 ++ GA L LR G L A+ G+ +A VG LSVP WA A P +R VA+ Sbjct 285 AAAGA-LSPLAPLRGGYIGDITPLGGGATGGIARAIYVGSLSVPQGWAEAAPVMRAVASV 343 Query 348 LPATSLAAAPATQIPANLLGQMALGSMTGGAL 379 LP T A A A + P L G+MAL S+ G AL Sbjct 344 LPGTGAAPALAAEAPGALFGEMALSSLAGRAL 375 Lambda K H 0.312 0.125 0.361 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 988661997050 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40