BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv1812c Length=400 Score E Sequences producing significant alignments: (Bits) Value gi|15608949|ref|NP_216328.1| dehydrogenase [Mycobacterium tuberc... 796 0.0 gi|31793001|ref|NP_855494.1| dehydrogenase [Mycobacterium bovis ... 792 0.0 gi|340626821|ref|YP_004745273.1| putative dehydrogenase [Mycobac... 790 0.0 gi|15841282|ref|NP_336319.1| pyridine nucleotide-disulfide famil... 786 0.0 gi|294996723|ref|ZP_06802414.1| dehydrogenase [Mycobacterium tub... 783 0.0 gi|240173098|ref|ZP_04751756.1| putative dehydrogenase [Mycobact... 593 2e-167 gi|118618453|ref|YP_906785.1| NADH dehydrogenase [Mycobacterium ... 538 4e-151 gi|183982695|ref|YP_001850986.1| NADH dehydrogenase [Mycobacteri... 536 2e-150 gi|296164797|ref|ZP_06847357.1| pyridine nucleotide-disulfide fa... 519 3e-145 gi|111024053|ref|YP_707025.1| NADH dehydrogenase [Rhodococcus jo... 502 4e-140 gi|27377316|ref|NP_768845.1| dehydrogenase [Bradyrhizobium japon... 425 6e-117 gi|187918859|ref|YP_001887890.1| FAD-dependent pyridine nucleoti... 399 3e-109 gi|78063783|ref|YP_373691.1| FAD-dependent pyridine nucleotide-d... 324 2e-86 gi|94313236|ref|YP_586445.1| FAD-dependent pyridine nucleotide-d... 320 3e-85 gi|330821658|ref|YP_004350520.1| putative dehydrogenase, oxidore... 316 5e-84 gi|104781178|ref|YP_607676.1| pyridine nucleotide-disulfide oxid... 314 1e-83 gi|152983080|ref|YP_001352723.1| FAD-dependent pyridine nucleoti... 312 6e-83 gi|167033275|ref|YP_001668506.1| FAD-dependent pyridine nucleoti... 312 7e-83 gi|113867756|ref|YP_726245.1| putative dehydrogenase, oxidoreduc... 311 1e-82 gi|170721445|ref|YP_001749133.1| FAD-dependent pyridine nucleoti... 308 8e-82 gi|227818807|ref|YP_002822778.1| NADH dehydrogenase, FAD-contain... 308 1e-81 gi|298290565|ref|YP_003692504.1| FAD-dependent pyridine nucleoti... 308 1e-81 gi|209885882|ref|YP_002289739.1| FAD-dependent pyridine nucleoti... 307 2e-81 gi|293607995|ref|ZP_06690298.1| conserved hypothetical protein [... 302 5e-80 gi|115376132|ref|ZP_01463376.1| FAD-dependent pyridine nucleotid... 302 6e-80 gi|340519204|gb|EGR49443.1| predicted protein [Trichoderma reese... 302 6e-80 gi|310824817|ref|YP_003957175.1| FAD-dependent pyridine nucleoti... 302 6e-80 gi|239504202|ref|ZP_04663512.1| NADH dehydrogenase, FAD-containi... 302 7e-80 gi|77458676|ref|YP_348182.1| FAD-dependent pyridine nucleotide-d... 301 1e-79 gi|170691047|ref|ZP_02882213.1| FAD-dependent pyridine nucleotid... 300 2e-79 gi|209516812|ref|ZP_03265663.1| FAD-dependent pyridine nucleotid... 300 2e-79 gi|182677318|ref|YP_001831464.1| FAD-dependent pyridine nucleoti... 300 3e-79 gi|154252804|ref|YP_001413628.1| FAD-dependent pyridine nucleoti... 298 1e-78 gi|113867757|ref|YP_726246.1| putative dehydrogenase, oxidoreduc... 298 1e-78 gi|213157475|ref|YP_002319520.1| NADH dehydrogenase fad-containi... 298 1e-78 gi|169795833|ref|YP_001713626.1| oxidoreductase; metal-binding o... 298 2e-78 gi|299770002|ref|YP_003732028.1| NADH dehydrogenase, FAD-contain... 297 2e-78 gi|187921327|ref|YP_001890359.1| FAD-dependent pyridine nucleoti... 297 2e-78 gi|336037346|gb|AEH83276.1| putative dehydrogenase, oxidoreducta... 297 2e-78 gi|334320483|ref|YP_004557112.1| FAD-dependent pyridine nucleoti... 296 3e-78 gi|170721555|ref|YP_001749243.1| FAD-dependent pyridine nucleoti... 296 4e-78 gi|333815164|gb|AEG07831.1| FAD-dependent pyridine nucleotide-di... 296 4e-78 gi|121594468|ref|YP_986364.1| FAD-dependent pyridine nucleotide-... 295 7e-78 gi|239834832|ref|ZP_04683160.1| NADH oxidase [Ochrobactrum inter... 295 9e-78 gi|184158244|ref|YP_001846583.1| NADH dehydrogenase, FAD-contain... 295 9e-78 gi|193077440|gb|ABO12253.2| NADH dehydrogenase FAD-containing su... 295 9e-78 gi|262279221|ref|ZP_06057006.1| NADH dehydrogenase FAD-containin... 294 1e-77 gi|325122369|gb|ADY81892.1| NADH dehydrogenase [Acinetobacter ca... 293 3e-77 gi|16264903|ref|NP_437695.1| dehydrogenase, oxidoreductase FAD f... 293 4e-77 gi|27377903|ref|NP_769432.1| dehydrogenase, oxidoreductase FAD f... 293 5e-77 >gi|15608949|ref|NP_216328.1| dehydrogenase [Mycobacterium tuberculosis H37Rv] gi|148661618|ref|YP_001283141.1| putative dehydrogenase [Mycobacterium tuberculosis H37Ra] gi|167967393|ref|ZP_02549670.1| putative dehydrogenase [Mycobacterium tuberculosis H37Ra] gi|307084428|ref|ZP_07493541.1| dehydrogenase [Mycobacterium tuberculosis SUMu012] gi|81555741|sp|O07220.1|Y1812_MYCTU RecName: Full=NADH dehydrogenase-like protein Rv1812c/MT1860 gi|2182015|emb|CAB09500.1| PROBABLE DEHYDROGENASE [Mycobacterium tuberculosis H37Rv] gi|148505770|gb|ABQ73579.1| putative dehydrogenase [Mycobacterium tuberculosis H37Ra] gi|308365972|gb|EFP54823.1| dehydrogenase [Mycobacterium tuberculosis SUMu012] Length=400 Score = 796 bits (2055), Expect = 0.0, Method: Compositional matrix adjust. Identities = 399/400 (99%), Positives = 400/400 (100%), Gaps = 0/400 (0%) Query 1 LTRVVVIGSGFAGLWAALGAARRLDELAVLAGTVDVMVVSNKPFHDIRVRNYEADLSACR 60 +TRVVVIGSGFAGLWAALGAARRLDELAVLAGTVDVMVVSNKPFHDIRVRNYEADLSACR Sbjct 1 MTRVVVIGSGFAGLWAALGAARRLDELAVLAGTVDVMVVSNKPFHDIRVRNYEADLSACR 60 Query 61 IPLGDVLGPAGVAHVTAEVTAIDADGRRVTTSTGASYSYDRLVLASGSHVVKPALPGLAE 120 IPLGDVLGPAGVAHVTAEVTAIDADGRRVTTSTGASYSYDRLVLASGSHVVKPALPGLAE Sbjct 61 IPLGDVLGPAGVAHVTAEVTAIDADGRRVTTSTGASYSYDRLVLASGSHVVKPALPGLAE 120 Query 121 FGFDVDTYDGAVRLQQHLQGLAGGPLTSAAATVVVVGAGLTGIETACELPGRLHALFARG 180 FGFDVDTYDGAVRLQQHLQGLAGGPLTSAAATVVVVGAGLTGIETACELPGRLHALFARG Sbjct 121 FGFDVDTYDGAVRLQQHLQGLAGGPLTSAAATVVVVGAGLTGIETACELPGRLHALFARG 180 Query 181 DGVTPRVVLIDHNPFVGSDMGLSARPVIEQALLDNGVETRTGVSVAAVSPGGVTLSSGER 240 DGVTPRVVLIDHNPFVGSDMGLSARPVIEQALLDNGVETRTGVSVAAVSPGGVTLSSGER Sbjct 181 DGVTPRVVLIDHNPFVGSDMGLSARPVIEQALLDNGVETRTGVSVAAVSPGGVTLSSGER 240 Query 241 LAAATVVWCAGMRASRLTEQLPVARDRLGRLQVDDYLRVIGVPAMFAAGDVAAARMDDEH 300 LAAATVVWCAGMRASRLTEQLPVARDRLGRLQVDDYLRVIGVPAMFAAGDVAAARMDDEH Sbjct 241 LAAATVVWCAGMRASRLTEQLPVARDRLGRLQVDDYLRVIGVPAMFAAGDVAAARMDDEH 300 Query 301 LSVMSCQHGRPMGRYAGCNVINDLFDQPLLALRIPWYVTVLDLGSAGAVYTEGWERKVVS 360 LSVMSCQHGRPMGRYAGCNVINDLFDQPLLALRIPWYVTVLDLGSAGAVYTEGWERKVVS Sbjct 301 LSVMSCQHGRPMGRYAGCNVINDLFDQPLLALRIPWYVTVLDLGSAGAVYTEGWERKVVS 360 Query 361 QGAPAKTTKQSINTRRIYPPLNGSRADLLAAAAPRVQPRP 400 QGAPAKTTKQSINTRRIYPPLNGSRADLLAAAAPRVQPRP Sbjct 361 QGAPAKTTKQSINTRRIYPPLNGSRADLLAAAAPRVQPRP 400 >gi|31793001|ref|NP_855494.1| dehydrogenase [Mycobacterium bovis AF2122/97] gi|121637714|ref|YP_977937.1| putative dehydrogenase [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224990198|ref|YP_002644885.1| putative dehydrogenase [Mycobacterium bovis BCG str. Tokyo 172] 58 more sequence titles Length=400 Score = 792 bits (2046), Expect = 0.0, Method: Compositional matrix adjust. Identities = 398/400 (99%), Positives = 399/400 (99%), Gaps = 0/400 (0%) Query 1 LTRVVVIGSGFAGLWAALGAARRLDELAVLAGTVDVMVVSNKPFHDIRVRNYEADLSACR 60 +TRVVVIGSGFAGLWAALGAARRLDELAV AGTVDVMVVSNKPFHDIRVRNYEADLSACR Sbjct 1 MTRVVVIGSGFAGLWAALGAARRLDELAVPAGTVDVMVVSNKPFHDIRVRNYEADLSACR 60 Query 61 IPLGDVLGPAGVAHVTAEVTAIDADGRRVTTSTGASYSYDRLVLASGSHVVKPALPGLAE 120 IPLGDVLGPAGVAHVTAEVTAIDADGRRVTTSTGASYSYDRLVLASGSHVVKPALPGLAE Sbjct 61 IPLGDVLGPAGVAHVTAEVTAIDADGRRVTTSTGASYSYDRLVLASGSHVVKPALPGLAE 120 Query 121 FGFDVDTYDGAVRLQQHLQGLAGGPLTSAAATVVVVGAGLTGIETACELPGRLHALFARG 180 FGFDVDTYDGAVRLQQHLQGLAGGPLTSAAATVVVVGAGLTGIETACELPGRLHALFARG Sbjct 121 FGFDVDTYDGAVRLQQHLQGLAGGPLTSAAATVVVVGAGLTGIETACELPGRLHALFARG 180 Query 181 DGVTPRVVLIDHNPFVGSDMGLSARPVIEQALLDNGVETRTGVSVAAVSPGGVTLSSGER 240 DGVTPRVVLIDHNPFVGSDMGLSARPVIEQALLDNGVETRTGVSVAAVSPGGVTLSSGER Sbjct 181 DGVTPRVVLIDHNPFVGSDMGLSARPVIEQALLDNGVETRTGVSVAAVSPGGVTLSSGER 240 Query 241 LAAATVVWCAGMRASRLTEQLPVARDRLGRLQVDDYLRVIGVPAMFAAGDVAAARMDDEH 300 LAAATVVWCAGMRASRLTEQLPVARDRLGRLQVDDYLRVIGVPAMFAAGDVAAARMDDEH Sbjct 241 LAAATVVWCAGMRASRLTEQLPVARDRLGRLQVDDYLRVIGVPAMFAAGDVAAARMDDEH 300 Query 301 LSVMSCQHGRPMGRYAGCNVINDLFDQPLLALRIPWYVTVLDLGSAGAVYTEGWERKVVS 360 LSVMSCQHGRPMGRYAGCNVINDLFDQPLLALRIPWYVTVLDLGSAGAVYTEGWERKVVS Sbjct 301 LSVMSCQHGRPMGRYAGCNVINDLFDQPLLALRIPWYVTVLDLGSAGAVYTEGWERKVVS 360 Query 361 QGAPAKTTKQSINTRRIYPPLNGSRADLLAAAAPRVQPRP 400 QGAPAKTTKQSINTRRIYPPLNGSRADLLAAAAPRVQPRP Sbjct 361 QGAPAKTTKQSINTRRIYPPLNGSRADLLAAAAPRVQPRP 400 >gi|340626821|ref|YP_004745273.1| putative dehydrogenase [Mycobacterium canettii CIPT 140010059] gi|340005011|emb|CCC44160.1| putative dehydrogenase [Mycobacterium canettii CIPT 140010059] Length=400 Score = 790 bits (2039), Expect = 0.0, Method: Compositional matrix adjust. Identities = 397/400 (99%), Positives = 398/400 (99%), Gaps = 0/400 (0%) Query 1 LTRVVVIGSGFAGLWAALGAARRLDELAVLAGTVDVMVVSNKPFHDIRVRNYEADLSACR 60 +TRVVVIGSGFAGLWAALGAARRLDELAV AGTVDVMVVSNKPFHDIRVRNYEADLSACR Sbjct 1 MTRVVVIGSGFAGLWAALGAARRLDELAVPAGTVDVMVVSNKPFHDIRVRNYEADLSACR 60 Query 61 IPLGDVLGPAGVAHVTAEVTAIDADGRRVTTSTGASYSYDRLVLASGSHVVKPALPGLAE 120 IPLGDVLGPAGVAHVTAEVTAIDADGRRV TSTGASYSYDRLVLASGSHVVKPALPGLAE Sbjct 61 IPLGDVLGPAGVAHVTAEVTAIDADGRRVITSTGASYSYDRLVLASGSHVVKPALPGLAE 120 Query 121 FGFDVDTYDGAVRLQQHLQGLAGGPLTSAAATVVVVGAGLTGIETACELPGRLHALFARG 180 FGFDVDTYDGAVRLQQHLQGLAGGPLTSAAATVVVVGAGLTGIETACELPGRLHALFARG Sbjct 121 FGFDVDTYDGAVRLQQHLQGLAGGPLTSAAATVVVVGAGLTGIETACELPGRLHALFARG 180 Query 181 DGVTPRVVLIDHNPFVGSDMGLSARPVIEQALLDNGVETRTGVSVAAVSPGGVTLSSGER 240 DGVTPRVVLIDHNPFVGSDMGLSARPVIEQALLDNGVETRTGVSVAAVSPGGVTLSSGER Sbjct 181 DGVTPRVVLIDHNPFVGSDMGLSARPVIEQALLDNGVETRTGVSVAAVSPGGVTLSSGER 240 Query 241 LAAATVVWCAGMRASRLTEQLPVARDRLGRLQVDDYLRVIGVPAMFAAGDVAAARMDDEH 300 LAAATVVWCAGMRASRLTEQLPVARDRLGRLQVDDYLRVIGVPAMFAAGDVAAARMDDEH Sbjct 241 LAAATVVWCAGMRASRLTEQLPVARDRLGRLQVDDYLRVIGVPAMFAAGDVAAARMDDEH 300 Query 301 LSVMSCQHGRPMGRYAGCNVINDLFDQPLLALRIPWYVTVLDLGSAGAVYTEGWERKVVS 360 LSVMSCQHGRPMGRYAGCNVINDLFDQPLLALRIPWYVTVLDLGSAGAVYTEGWERKVVS Sbjct 301 LSVMSCQHGRPMGRYAGCNVINDLFDQPLLALRIPWYVTVLDLGSAGAVYTEGWERKVVS 360 Query 361 QGAPAKTTKQSINTRRIYPPLNGSRADLLAAAAPRVQPRP 400 QGAPAKTTKQSINTRRIYPPLNGSRADLLAAAAPRVQPRP Sbjct 361 QGAPAKTTKQSINTRRIYPPLNGSRADLLAAAAPRVQPRP 400 >gi|15841282|ref|NP_336319.1| pyridine nucleotide-disulfide family oxidoreductase [Mycobacterium tuberculosis CDC1551] gi|148823025|ref|YP_001287779.1| dehydrogenase [Mycobacterium tuberculosis F11] gi|254364640|ref|ZP_04980686.1| hypothetical dehydrogenase [Mycobacterium tuberculosis str. Haarlem] gi|13881511|gb|AAK46133.1| oxidoreductase, pyridine nucleotide-disulphide family [Mycobacterium tuberculosis CDC1551] gi|134150154|gb|EBA42199.1| hypothetical dehydrogenase [Mycobacterium tuberculosis str. Haarlem] gi|148721552|gb|ABR06177.1| hypothetical dehydrogenase [Mycobacterium tuberculosis F11] Length=397 Score = 786 bits (2031), Expect = 0.0, Method: Compositional matrix adjust. Identities = 395/397 (99%), Positives = 396/397 (99%), Gaps = 0/397 (0%) Query 4 VVVIGSGFAGLWAALGAARRLDELAVLAGTVDVMVVSNKPFHDIRVRNYEADLSACRIPL 63 +VVIGSGFAGLWAALGAARRLDELAV AGTVDVMVVSNKPFHDIRVRNYEADLSACRIPL Sbjct 1 MVVIGSGFAGLWAALGAARRLDELAVPAGTVDVMVVSNKPFHDIRVRNYEADLSACRIPL 60 Query 64 GDVLGPAGVAHVTAEVTAIDADGRRVTTSTGASYSYDRLVLASGSHVVKPALPGLAEFGF 123 GDVLGPAGVAHVTAEVTAIDADGRRVTTSTGASYSYDRLVLASGSHVVKPALPGLAEFGF Sbjct 61 GDVLGPAGVAHVTAEVTAIDADGRRVTTSTGASYSYDRLVLASGSHVVKPALPGLAEFGF 120 Query 124 DVDTYDGAVRLQQHLQGLAGGPLTSAAATVVVVGAGLTGIETACELPGRLHALFARGDGV 183 DVDTYDGAVRLQQHLQGLAGGPLTSAAATVVVVGAGLTGIETACELPGRLHALFARGDGV Sbjct 121 DVDTYDGAVRLQQHLQGLAGGPLTSAAATVVVVGAGLTGIETACELPGRLHALFARGDGV 180 Query 184 TPRVVLIDHNPFVGSDMGLSARPVIEQALLDNGVETRTGVSVAAVSPGGVTLSSGERLAA 243 TPRVVLIDHNPFVGSDMGLSARPVIEQALLDNGVETRTGVSVAAVSPGGVTLSSGERLAA Sbjct 181 TPRVVLIDHNPFVGSDMGLSARPVIEQALLDNGVETRTGVSVAAVSPGGVTLSSGERLAA 240 Query 244 ATVVWCAGMRASRLTEQLPVARDRLGRLQVDDYLRVIGVPAMFAAGDVAAARMDDEHLSV 303 ATVVWCAGMRASRLTEQLPVARDRLGRLQVDDYLRVIGVPAMFAAGDVAAARMDDEHLSV Sbjct 241 ATVVWCAGMRASRLTEQLPVARDRLGRLQVDDYLRVIGVPAMFAAGDVAAARMDDEHLSV 300 Query 304 MSCQHGRPMGRYAGCNVINDLFDQPLLALRIPWYVTVLDLGSAGAVYTEGWERKVVSQGA 363 MSCQHGRPMGRYAGCNVINDLFDQPLLALRIPWYVTVLDLGSAGAVYTEGWERKVVSQGA Sbjct 301 MSCQHGRPMGRYAGCNVINDLFDQPLLALRIPWYVTVLDLGSAGAVYTEGWERKVVSQGA 360 Query 364 PAKTTKQSINTRRIYPPLNGSRADLLAAAAPRVQPRP 400 PAKTTKQSINTRRIYPPLNGSRADLLAAAAPRVQPRP Sbjct 361 PAKTTKQSINTRRIYPPLNGSRADLLAAAAPRVQPRP 397 >gi|294996723|ref|ZP_06802414.1| dehydrogenase [Mycobacterium tuberculosis 210] Length=395 Score = 783 bits (2023), Expect = 0.0, Method: Compositional matrix adjust. Identities = 393/395 (99%), Positives = 394/395 (99%), Gaps = 0/395 (0%) Query 6 VIGSGFAGLWAALGAARRLDELAVLAGTVDVMVVSNKPFHDIRVRNYEADLSACRIPLGD 65 +IGSGFAGLWAALGAARRLDELAV AGTVDVMVVSNKPFHDIRVRNYEADLSACRIPLGD Sbjct 1 MIGSGFAGLWAALGAARRLDELAVPAGTVDVMVVSNKPFHDIRVRNYEADLSACRIPLGD 60 Query 66 VLGPAGVAHVTAEVTAIDADGRRVTTSTGASYSYDRLVLASGSHVVKPALPGLAEFGFDV 125 VLGPAGVAHVTAEVTAIDADGRRVTTSTGASYSYDRLVLASGSHVVKPALPGLAEFGFDV Sbjct 61 VLGPAGVAHVTAEVTAIDADGRRVTTSTGASYSYDRLVLASGSHVVKPALPGLAEFGFDV 120 Query 126 DTYDGAVRLQQHLQGLAGGPLTSAAATVVVVGAGLTGIETACELPGRLHALFARGDGVTP 185 DTYDGAVRLQQHLQGLAGGPLTSAAATVVVVGAGLTGIETACELPGRLHALFARGDGVTP Sbjct 121 DTYDGAVRLQQHLQGLAGGPLTSAAATVVVVGAGLTGIETACELPGRLHALFARGDGVTP 180 Query 186 RVVLIDHNPFVGSDMGLSARPVIEQALLDNGVETRTGVSVAAVSPGGVTLSSGERLAAAT 245 RVVLIDHNPFVGSDMGLSARPVIEQALLDNGVETRTGVSVAAVSPGGVTLSSGERLAAAT Sbjct 181 RVVLIDHNPFVGSDMGLSARPVIEQALLDNGVETRTGVSVAAVSPGGVTLSSGERLAAAT 240 Query 246 VVWCAGMRASRLTEQLPVARDRLGRLQVDDYLRVIGVPAMFAAGDVAAARMDDEHLSVMS 305 VVWCAGMRASRLTEQLPVARDRLGRLQVDDYLRVIGVPAMFAAGDVAAARMDDEHLSVMS Sbjct 241 VVWCAGMRASRLTEQLPVARDRLGRLQVDDYLRVIGVPAMFAAGDVAAARMDDEHLSVMS 300 Query 306 CQHGRPMGRYAGCNVINDLFDQPLLALRIPWYVTVLDLGSAGAVYTEGWERKVVSQGAPA 365 CQHGRPMGRYAGCNVINDLFDQPLLALRIPWYVTVLDLGSAGAVYTEGWERKVVSQGAPA Sbjct 301 CQHGRPMGRYAGCNVINDLFDQPLLALRIPWYVTVLDLGSAGAVYTEGWERKVVSQGAPA 360 Query 366 KTTKQSINTRRIYPPLNGSRADLLAAAAPRVQPRP 400 KTTKQSINTRRIYPPLNGSRADLLAAAAPRVQPRP Sbjct 361 KTTKQSINTRRIYPPLNGSRADLLAAAAPRVQPRP 395 >gi|240173098|ref|ZP_04751756.1| putative dehydrogenase [Mycobacterium kansasii ATCC 12478] Length=399 Score = 593 bits (1528), Expect = 2e-167, Method: Compositional matrix adjust. Identities = 318/400 (80%), Positives = 353/400 (89%), Gaps = 1/400 (0%) Query 1 LTRVVVIGSGFAGLWAALGAARRLDELAVLAGTVDVMVVSNKPFHDIRVRNYEADLSACR 60 +TRV+VIGSGFAGLWAALGAARRLD+LAV GTVD+ V+S+KPFHDIRVRNYEADLSACR Sbjct 1 MTRVLVIGSGFAGLWAALGAARRLDQLAVAPGTVDITVLSDKPFHDIRVRNYEADLSACR 60 Query 61 IPLGDVLGPAGVAHVTAEVTAIDADGRRVTTSTGASYSYDRLVLASGSHVVKPALPGLAE 120 IPL DVL PAGVAHVTA VT IDA R+VT+S+G +Y YDRLVLA+GS +VKP +PGL E Sbjct 61 IPLADVLDPAGVAHVTANVTGIDAGARKVTSSSGQTYRYDRLVLAAGSRLVKPDVPGLRE 120 Query 121 FGFDVDTYDGAVRLQQHLQGLAGGPLTSAAATVVVVGAGLTGIETACELPGRLHALFARG 180 FGFDVDTYDGA+RLQ HL LA GP+T+AAATVVVVGAGLTGIETACE+P RL ALF G Sbjct 121 FGFDVDTYDGAIRLQHHLNKLADGPVTAAAATVVVVGAGLTGIETACEMPSRLRALFV-G 179 Query 181 DGVTPRVVLIDHNPFVGSDMGLSARPVIEQALLDNGVETRTGVSVAAVSPGGVTLSSGER 240 VTP+VVL+DHNPFVGSDMG SARPVIEQAL DNGVETRT VSVA +S GV+LSSGE Sbjct 180 RSVTPQVVLVDHNPFVGSDMGSSARPVIEQALADNGVETRTAVSVAKISASGVSLSSGEH 239 Query 241 LAAATVVWCAGMRASRLTEQLPVARDRLGRLQVDDYLRVIGVPAMFAAGDVAAARMDDEH 300 LAAATVVWCAGMRA+ LT QLPV RDRLGR++VDDYLRV+GVPA+FAAGDVA A +DDEH Sbjct 240 LAAATVVWCAGMRANSLTGQLPVTRDRLGRVEVDDYLRVVGVPAVFAAGDVALAEVDDEH 299 Query 301 LSVMSCQHGRPMGRYAGCNVINDLFDQPLLALRIPWYVTVLDLGSAGAVYTEGWERKVVS 360 +SVMSCQHGRPMGRYAG NVI+DLF +PLLA RIPWYVTVLDLG AGAVYTEGW+R+VVS Sbjct 300 VSVMSCQHGRPMGRYAGYNVISDLFGEPLLAFRIPWYVTVLDLGPAGAVYTEGWDREVVS 359 Query 361 QGAPAKTTKQSINTRRIYPPLNGSRADLLAAAAPRVQPRP 400 +GA AK TKQ INTRRIYPPL +RADLLAAAAP +Q RP Sbjct 360 RGAEAKATKQMINTRRIYPPLTRNRADLLAAAAPELQARP 399 >gi|118618453|ref|YP_906785.1| NADH dehydrogenase [Mycobacterium ulcerans Agy99] gi|118570563|gb|ABL05314.1| NADH dehydrogenase [Mycobacterium ulcerans Agy99] Length=399 Score = 538 bits (1387), Expect = 4e-151, Method: Compositional matrix adjust. Identities = 302/400 (76%), Positives = 335/400 (84%), Gaps = 1/400 (0%) Query 1 LTRVVVIGSGFAGLWAALGAARRLDELAVLAGTVDVMVVSNKPFHDIRVRNYEADLSACR 60 ++RV+VIGSGFAGLWAALGAARR++ELAV G+VD+ V+S KPFHDIRVRNYE DLS CR Sbjct 1 MSRVLVIGSGFAGLWAALGAARRVEELAVPPGSVDITVLSAKPFHDIRVRNYETDLSTCR 60 Query 61 IPLGDVLGPAGVAHVTAEVTAIDADGRRVTTSTGASYSYDRLVLASGSHVVKPALPGLAE 120 IPL D+L PAGV+H+ A V IDA RRV T+ G +Y YDRLVLASGS V KP LPGL E Sbjct 61 IPLADLLDPAGVSHIPAVVVGIDAAARRVRTADGQTYEYDRLVLASGSQVAKPDLPGLQE 120 Query 121 FGFDVDTYDGAVRLQQHLQGLAGGPLTSAAATVVVVGAGLTGIETACELPGRLHALFARG 180 FGFDVDTY+GAVRLQ HLQ LA P +A ATVVVVGAGLTGIETACELP RL LFA Sbjct 121 FGFDVDTYEGAVRLQCHLQQLADRPPAAATATVVVVGAGLTGIETACELPARLAKLFAHS 180 Query 181 DGVTPRVVLIDHNPFVGSDMGLSARPVIEQALLDNGVETRTGVSVAAVSPGGVTLSSGER 240 V PRVVL+DHNP VGSDMG SARPVIE+AL + GVETRT V V AV+ GV LSSGE Sbjct 181 -AVVPRVVLVDHNPVVGSDMGASARPVIEEALSEVGVETRTAVGVTAVTEAGVALSSGEL 239 Query 241 LAAATVVWCAGMRASRLTEQLPVARDRLGRLQVDDYLRVIGVPAMFAAGDVAAARMDDEH 300 L AATVVWCAGMRA+ L EQLPV RDRLGR++VDDYLRV+GVP +FAAGDVAAA+MDD+H Sbjct 240 LEAATVVWCAGMRANSLAEQLPVHRDRLGRVEVDDYLRVVGVPEIFAAGDVAAAQMDDDH 299 Query 301 LSVMSCQHGRPMGRYAGCNVINDLFDQPLLALRIPWYVTVLDLGSAGAVYTEGWERKVVS 360 +SVMSCQHGRPMGRYAG NVI+DLF +PLLALRIPWYVTVLDLG AGAVYTEGW+R VVS Sbjct 300 VSVMSCQHGRPMGRYAGYNVISDLFGEPLLALRIPWYVTVLDLGPAGAVYTEGWDRMVVS 359 Query 361 QGAPAKTTKQSINTRRIYPPLNGSRADLLAAAAPRVQPRP 400 +GA AK TKQ+INT RIYPPL RADLLAAAAP +Q RP Sbjct 360 RGAKAKATKQTINTERIYPPLTRDRADLLAAAAPDLQDRP 399 >gi|183982695|ref|YP_001850986.1| NADH dehydrogenase [Mycobacterium marinum M] gi|183176021|gb|ACC41131.1| NADH dehydrogenase [Mycobacterium marinum M] Length=399 Score = 536 bits (1382), Expect = 2e-150, Method: Compositional matrix adjust. Identities = 303/400 (76%), Positives = 335/400 (84%), Gaps = 1/400 (0%) Query 1 LTRVVVIGSGFAGLWAALGAARRLDELAVLAGTVDVMVVSNKPFHDIRVRNYEADLSACR 60 ++RV+VIGSGFAGLWAALGAARR++ELAV G+VD+ V+S KPFHDIRVRNYE DLS CR Sbjct 1 MSRVLVIGSGFAGLWAALGAARRVEELAVPPGSVDITVLSAKPFHDIRVRNYETDLSTCR 60 Query 61 IPLGDVLGPAGVAHVTAEVTAIDADGRRVTTSTGASYSYDRLVLASGSHVVKPALPGLAE 120 IPL D+L PAGV+H+ A V IDA RRV T+ G +Y YDRLVLASGS V KP LPGL E Sbjct 61 IPLADLLDPAGVSHIPAVVVGIDAAARRVRTADGQTYEYDRLVLASGSQVAKPDLPGLQE 120 Query 121 FGFDVDTYDGAVRLQQHLQGLAGGPLTSAAATVVVVGAGLTGIETACELPGRLHALFARG 180 FGFDVDTY+GAVRLQ HLQ LA P +AAATVVVVGAGLTGIETACELP RL LFA Sbjct 121 FGFDVDTYEGAVRLQCHLQQLADRPPAAAAATVVVVGAGLTGIETACELPARLAKLFAHS 180 Query 181 DGVTPRVVLIDHNPFVGSDMGLSARPVIEQALLDNGVETRTGVSVAAVSPGGVTLSSGER 240 V PRVVL+DHNP VGSDMG SARPVIE+AL + GVETRT V V AV+ GV LSSGE Sbjct 181 -AVVPRVVLVDHNPVVGSDMGASARPVIEEALSEVGVETRTAVGVTAVTEAGVALSSGEL 239 Query 241 LAAATVVWCAGMRASRLTEQLPVARDRLGRLQVDDYLRVIGVPAMFAAGDVAAARMDDEH 300 L AATVVWCAGMRA+ L EQLPV RDRLGR++VDDYLRV GVP +FAAGDVAAA+MDD+H Sbjct 240 LEAATVVWCAGMRANSLAEQLPVHRDRLGRVEVDDYLRVAGVPEIFAAGDVAAAQMDDDH 299 Query 301 LSVMSCQHGRPMGRYAGCNVINDLFDQPLLALRIPWYVTVLDLGSAGAVYTEGWERKVVS 360 +SVMSCQHGRPMGRYAG NVI+DLF +PLLALRIPWYVTVLDLG AGAVYTEGW+R VVS Sbjct 300 VSVMSCQHGRPMGRYAGYNVISDLFGEPLLALRIPWYVTVLDLGPAGAVYTEGWDRMVVS 359 Query 361 QGAPAKTTKQSINTRRIYPPLNGSRADLLAAAAPRVQPRP 400 +GA AK TKQ+INT RIYPPL RADLLAAAAP +Q RP Sbjct 360 RGAKAKATKQTINTERIYPPLTRDRADLLAAAAPDLQDRP 399 >gi|296164797|ref|ZP_06847357.1| pyridine nucleotide-disulfide family oxidoreductase [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295899851|gb|EFG79297.1| pyridine nucleotide-disulfide family oxidoreductase [Mycobacterium parascrofulaceum ATCC BAA-614] Length=398 Score = 519 bits (1337), Expect = 3e-145, Method: Compositional matrix adjust. Identities = 308/400 (77%), Positives = 336/400 (84%), Gaps = 2/400 (0%) Query 1 LTRVVVIGSGFAGLWAALGAARRLDELAVLAGTVDVMVVSNKPFHDIRVRNYEADLSACR 60 +T VVVIGSGFAGLWAALGAARRLDELAV GTVD+ V++ +PFHDIRVRNYEADLSACR Sbjct 1 MTAVVVIGSGFAGLWAALGAARRLDELAVAPGTVDITVLAARPFHDIRVRNYEADLSACR 60 Query 61 IPLGDVLGPAGVAHVTAEVTAIDADGRRVTTSTGASYSYDRLVLASGSHVVKPALPGLAE 120 IPL D+L PAGVAHV EVTAID R V TS GA+Y YDRLVLA+GS +V PA+PGL E Sbjct 61 IPLADLLDPAGVAHVATEVTAIDTAARTVATSGGATYGYDRLVLAAGSRLVTPAVPGLRE 120 Query 121 FGFDVDTYDGAVRLQQHLQGLAGGPLTSAAATVVVVGAGLTGIETACELPGRLHALFARG 180 FGFDVDTYDGA+ L+ HL+ LA G T AAATVVVVGAGLTGIE ACELP RL LFA G Sbjct 121 FGFDVDTYDGALALRDHLRRLADGSPTPAAATVVVVGAGLTGIEVACELPDRLRRLFA-G 179 Query 181 DGVTPRVVLIDHNPFVGSDMGLSARPVIEQALLDNGVETRTGVSVAAVSPGGVTLSSGER 240 GV PRVVL+D N +GSDMG SA PVIE AL NGVETR GV VAA+S V+LSSGE+ Sbjct 180 AGVVPRVVLVDRN-RIGSDMGASAVPVIEAALAGNGVETRVGVHVAAISADNVSLSSGEQ 238 Query 241 LAAATVVWCAGMRASRLTEQLPVARDRLGRLQVDDYLRVIGVPAMFAAGDVAAARMDDEH 300 LAA TVVWCAGMRAS LTEQ+PV RD LGRL VDD+LRVIGVPAMFAAGDVAAARMD H Sbjct 239 LAAGTVVWCAGMRASPLTEQVPVPRDGLGRLPVDDFLRVIGVPAMFAAGDVAAARMDAGH 298 Query 301 LSVMSCQHGRPMGRYAGCNVINDLFDQPLLALRIPWYVTVLDLGSAGAVYTEGWERKVVS 360 +SVMSCQHGRPMGRYAG NVI++L +PLLALRIPWYVTVLDLG AGAVYTEGW+R VVS Sbjct 299 MSVMSCQHGRPMGRYAGYNVISELLGEPLLALRIPWYVTVLDLGPAGAVYTEGWDRVVVS 358 Query 361 QGAPAKTTKQSINTRRIYPPLNGSRADLLAAAAPRVQPRP 400 GA AK TK++INTRRIYPPL G RADLLAAAAPR+Q RP Sbjct 359 TGAAAKDTKRTINTRRIYPPLTGDRADLLAAAAPRLQSRP 398 >gi|111024053|ref|YP_707025.1| NADH dehydrogenase [Rhodococcus jostii RHA1] gi|110823583|gb|ABG98867.1| probable NADH dehydrogenase [Rhodococcus jostii RHA1] Length=407 Score = 502 bits (1293), Expect = 4e-140, Method: Compositional matrix adjust. Identities = 286/401 (72%), Positives = 317/401 (80%), Gaps = 6/401 (1%) Query 3 RVVVIGSGFAGLWAALGAARRLDELAVLAGTVDVMVVSNKPFHDIRVRNYEADLSACRIP 62 RV+V+GSGFAGLWAALGAARR DEL A TVDV V+S +PFHDIRVRNYEADLSACRIP Sbjct 6 RVLVLGSGFAGLWAALGAARRRDELDA-ADTVDVTVISAQPFHDIRVRNYEADLSACRIP 64 Query 63 LGDVLGPAGVAHVTAEVTAIDADGRRVTTSTGA---SYSYDRLVLASGSHVVKPALPGLA 119 L DVL P V H+ AEV AID VT S + YDRLV+A GS VVKP +PGL Sbjct 65 LSDVLDPVDVGHIAAEVRAIDTAAHSVTVSGNGVQPTQRYDRLVMALGSRVVKPDIPGLR 124 Query 120 EFGFDVDTYDGAVRLQQHLQGLAGGPLTSAAATVVVVGAGLTGIETACELPGRLHALFAR 179 FGFDVDTYDGA++LQ+HL L+ G AAT VVVGAGLTGIETA ELPG L + A Sbjct 125 AFGFDVDTYDGAIKLQRHLATLSDGRADGGAATAVVVGAGLTGIETASELPGMLAKVCA- 183 Query 180 GDGVTPRVVLIDHNPFVGSDMGLSARPVIEQALLDNGVETRTGVSVAAVSPGGVTLSSGE 239 G V PRVVLIDHNP+VGSDMG SARPVIE AL DNGVET TGV VAAV GVTLSSGE Sbjct 184 GRSVEPRVVLIDHNPYVGSDMGASARPVIEAALSDNGVETMTGVGVAAVDEHGVTLSSGE 243 Query 240 RLAAATVVWCAGMRASRLTEQLPVARDRLGRLQVDDYLRVIGVPAMFAAGDVAAARMDDE 299 LAA TVVWCAGMRA+ LT QL RDRLGRL VDDYLRVIG P +FAAGDVAAA++DD+ Sbjct 244 VLAAGTVVWCAGMRANPLTAQLG-ERDRLGRLPVDDYLRVIGSPGVFAAGDVAAAQVDDD 302 Query 300 HLSVMSCQHGRPMGRYAGCNVINDLFDQPLLALRIPWYVTVLDLGSAGAVYTEGWERKVV 359 H+SVMSCQHGRPMGRYAG NV++DL +P+L LRIPWY T+LDLG AGAVYTEGW+R+VV Sbjct 303 HVSVMSCQHGRPMGRYAGYNVVSDLLGEPMLPLRIPWYATILDLGPAGAVYTEGWDRQVV 362 Query 360 SQGAPAKTTKQSINTRRIYPPLNGSRADLLAAAAPRVQPRP 400 S+GA AK TK +INT+RIYPPLN R LLAAAAP +Q RP Sbjct 363 SRGARAKATKVTINTQRIYPPLNRDRDALLAAAAPVLQARP 403 >gi|27377316|ref|NP_768845.1| dehydrogenase [Bradyrhizobium japonicum USDA 110] gi|27350459|dbj|BAC47470.1| blr2205 [Bradyrhizobium japonicum USDA 110] Length=406 Score = 425 bits (1093), Expect = 6e-117, Method: Compositional matrix adjust. Identities = 229/404 (57%), Positives = 283/404 (71%), Gaps = 8/404 (1%) Query 1 LTRVVVIGSGFAGLWAALGAARRLDELAVLAGTVDVMVVSNKPFHDIRVRNYEADLSACR 60 +TR+VV+G+GFAGLWAA+GAAR+ DE+ +++ VV P+H+IRVRNYE DLS Sbjct 1 MTRIVVLGAGFAGLWAAIGAARKRDEIGAAGRDIEIRVVDRNPYHNIRVRNYEVDLSEVA 60 Query 61 IPLGDVLGPAGVAHVTAEVTAIDADGRRVT--TSTGA-SYSYDRLVLASGSHVVKPALPG 117 +PLG +L P GV H EV AID R ++ TS G + YDRLVLA GS V +P +PG Sbjct 61 LPLGQLLDPIGVTHGLGEVEAIDPARREISLVTSDGEETLGYDRLVLAVGSEVTRPDIPG 120 Query 118 LAEFGFDVDTYDGAVRLQQHLQGLAGGPLTSAAATVVVVGAGLTGIETACELPGRLHALF 177 LA+ FDVDTY A+RL+ HL L + +TVVVVGAG TGIE A E+P RL Sbjct 121 LADHAFDVDTYIAALRLEDHLVSLGRSVPSPGRSTVVVVGAGFTGIEVAAEMPDRL---- 176 Query 178 ARGDGVTPR-VVLIDHNPFVGSDMGLSARPVIEQALLDNGVETRTGVSVAAVSPGGVTLS 236 AR R ++L+D NP VG+ +G ARPVIE AL +ETR G VA+V GV LS Sbjct 177 ARAGITGSRCIILVDPNPTVGATIGAHARPVIETALSALDIETRLGARVASVEAAGVQLS 236 Query 237 SGERLAAATVVWCAGMRASRLTEQLPVARDRLGRLQVDDYLRVIGVPAMFAAGDVAAARM 296 SGE + A TV+WCAG+RASRL LP ARDRLGRL VD ++RV +P +FAAGDVA++ + Sbjct 237 SGEFIPAQTVIWCAGLRASRLAASLPGARDRLGRLLVDPFMRVADLPCVFAAGDVASSVV 296 Query 297 DDEHLSVMSCQHGRPMGRYAGCNVINDLFDQPLLALRIPWYVTVLDLGSAGAVYTEGWER 356 D H +VMSCQ RPMGR+AG NV+ DL P+L LRI WYVTVLDLGS GA+YTEGW+R Sbjct 297 DGLHPTVMSCQFARPMGRFAGHNVVADLLGLPMLPLRIDWYVTVLDLGSWGALYTEGWDR 356 Query 357 KVVSQGAPAKTTKQSINTRRIYPPLNGSRADLLAAAAPRVQPRP 400 +V + GA AK TKQ+IN +RIYPPLNGS+ +L AAAAP VQ P Sbjct 357 EVRTTGAAAKATKQTINRKRIYPPLNGSKDELFAAAAPTVQTPP 400 >gi|187918859|ref|YP_001887890.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase [Burkholderia phytofirmans PsJN] gi|187717297|gb|ACD18520.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase [Burkholderia phytofirmans PsJN] Length=408 Score = 399 bits (1026), Expect = 3e-109, Method: Compositional matrix adjust. Identities = 218/403 (55%), Positives = 271/403 (68%), Gaps = 4/403 (0%) Query 1 LTRVVVIGSGFAGLWAALGAARRLDELAVLAGTVDVMVVSNKPFHDIRVRNYEADLSACR 60 + R+VVIG+GFAGLW+A+GAAR+LDEL V A V+++VV+ P+H IRVRNYE +L R Sbjct 1 MKRIVVIGAGFAGLWSAIGAARKLDELRVPADQVEMVVVNGTPYHSIRVRNYEQNLDETR 60 Query 61 IPLGDVLGPAGVAHVTAEVTAID-ADGRRVTTSTGASYS--YDRLVLASGSHVVKPALPG 117 +PL DVLGP GV V EV+ ID A+GR + G + + YDRLV+A+GS +V P +PG Sbjct 61 VPLADVLGPIGVRLVEGEVSGIDSANGRIAVQTQGPTQTLPYDRLVIAAGSQLVHPDIPG 120 Query 118 LAEFGFDVDTYDGAVRLQQHLQGLAGGPLTSAAATVVVVGAGLTGIETACELPGRLHALF 177 L E FDVDT+ GA +L HL+GL ++ T VVVGAGLTGIE A ELP RL + Sbjct 121 LTEHAFDVDTFSGAAKLATHLRGLPSLANAASPFTAVVVGAGLTGIELAAELPARLRGIA 180 Query 178 ARGDGVTPRVVLIDHNPFVGSDMGLSARPVIEQALLDNGVETRTGVSVAAVSPGGVTLSS 237 VVL D + +G MG A+PVIE+A+ GVE GVS+ +V GV L++ Sbjct 181 GDAHRDAVHVVLADRSAKIGQAMG-GAQPVIERAMDALGVEMLAGVSLQSVDADGVELTN 239 Query 238 GERLAAATVVWCAGMRASRLTEQLPVARDRLGRLQVDDYLRVIGVPAMFAAGDVAAARMD 297 G R+ AATV+WC GMRA+ LT Q+PV D GRL VD ++RV VP +FAAGD A +D Sbjct 240 GRRIDAATVIWCGGMRANALTAQIPVTLDPFGRLPVDAFMRVENVPHVFAAGDCARVLID 299 Query 298 DEHLSVMSCQHGRPMGRYAGCNVINDLFDQPLLALRIPWYVTVLDLGSAGAVYTEGWERK 357 SVMSCQH RPMGRYAG NV+ DL +L L I WY T+LDLG GAVYTEGW+R Sbjct 300 GARPSVMSCQHSRPMGRYAGHNVVCDLLGGEMLPLHIDWYTTILDLGPWGAVYTEGWDRH 359 Query 358 VVSQGAPAKTTKQSINTRRIYPPLNGSRADLLAAAAPRVQPRP 400 +VS+G AK TKQ+IN RIYPP R D+L AAAP VQ P Sbjct 360 LVSEGDAAKATKQTINCIRIYPPRTRLRDDILQAAAPVVQTPP 402 >gi|78063783|ref|YP_373691.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase [Burkholderia sp. 383] gi|77971668|gb|ABB13047.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase [Burkholderia sp. 383] Length=425 Score = 324 bits (830), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 191/397 (49%), Positives = 244/397 (62%), Gaps = 10/397 (2%) Query 3 RVVVIGSGFAGLWAALGAARRLDELAVLAGTVDVMVVSNKPFHDIRVRNYEADLSACRIP 62 R++VIG+GFAG+W+AL AAR LD A V++ VV+ +R R YE + R P Sbjct 28 RILVIGAGFAGMWSALSAARVLD--AQGRTDVEITVVAPDAHLHVRPRLYEEGPANFRAP 85 Query 63 LGDVLGPAGVAHVTAEVTAIDADGRRV----TTSTGASYSYDRLVLASGSHVVKPALPGL 118 LG++ GV V V ID R T + YDRLVLA+GS + +PA+PGL Sbjct 86 LGEIFDAVGVTFVQGTVERIDVAHRTADVLGTDGEATTLDYDRLVLAAGSRLFRPAIPGL 145 Query 119 AEFGFDVDTYDGAVRLQQHLQGLAGGPLTSAAATVVVVGAGLTGIETACELPGRLHALFA 178 AE F VD D AV L+ H++ LA P ++A TVVV G G TGIETA E+P RL A A Sbjct 146 AEHAFSVDQTDEAVELEAHIRDLALQPASTARDTVVVAGGGFTGIETAAEMPARLRA--A 203 Query 179 RGDGVTPRVVLIDHNPFVGSDMGLSARPVIEQALLDNGVETRTGVSVAAVSPGGVTLSSG 238 G+ RVV+++ N +G D+G RPVIE+AL GV + G VA+V GG+T + G Sbjct 204 LGEHANVRVVIVERNDAIGPDLGAGPRPVIEEALRTLGVTWKLGSGVASVDAGGITTADG 263 Query 239 ERLAAATVVWCAGMRASRLTEQLPVARDRLGRLQVDDYLRVIGVPAMFAAGDVAAARMDD 298 ER+ ++TV+W AG+RAS LTEQ+P RD GRL VD L V GVP ++A GDVA A DD Sbjct 264 ERIESSTVIWTAGLRASTLTEQVPGRRDATGRLHVDRNLAVEGVPGVYATGDVAYAATDD 323 Query 299 E-HLSVMSCQHGRPMGRYAGCNVINDLFDQPLLALRIPWYVTVLDLGSAGAVYTEGWERK 357 E + ++MSCQH +GR AG NV DL + P YVT LDLG GAVYTEGW+R+ Sbjct 324 EGNHTMMSCQHAMNLGRSAGHNVAADLLGLEQIPYSQPKYVTCLDLGPWGAVYTEGWDRE 383 Query 358 VVSQGAPAKTTKQSINTRRIYPPLNGSRADLLAAAAP 394 V +GA AK K IN+ IYPP R++ LAAA P Sbjct 384 VKLKGAEAKKLKHQINSEWIYPP-RADRSEALAAADP 419 >gi|94313236|ref|YP_586445.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase [Cupriavidus metallidurans CH34] gi|93357088|gb|ABF11176.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase [Cupriavidus metallidurans CH34] Length=402 Score = 320 bits (820), Expect = 3e-85, Method: Compositional matrix adjust. Identities = 185/401 (47%), Positives = 244/401 (61%), Gaps = 15/401 (3%) Query 3 RVVVIGSGFAGLWAALGAARRLDELAVLAGTVDVMVVSNKPFHDIRVRN--YEADLSACR 60 R++VIG+GFAG+W+AL +AR LDE+ G D+ +V P ++ VR YE + + Sbjct 4 RILVIGAGFAGMWSALASARLLDEV----GRTDIEIVLVAPEAELHVRPRLYEQNPGGMK 59 Query 61 IPLGDVLGPAGVAHVTAEVTAIDADGRRVTTSTGASYS-----YDRLVLASGSHVVKPAL 115 PL ++ G+ V V ID ++V S+ A S +DRLVLA+GS + KP + Sbjct 60 APLQEIFKAVGIRFVQGYVERIDVANQQVEVSSAAETSPVVLGFDRLVLAAGSRLFKPQI 119 Query 116 PGLAEFGFDVDTYDGAVRLQQHLQGLAGGPLTSAAATVVVVGAGLTGIETACELPGRLHA 175 GL E F+VD A L+ H++ LA P + A TVVV G G TGIETA E+P RL Sbjct 120 SGLDEHAFNVDQVASAATLEAHIESLATRPASIARNTVVVAGGGFTGIETAAEMPARLRE 179 Query 176 LFARGDGVTPRVVLIDHNPFVGSDMGLSARPVIEQALLDNGVETRTGVSVAAVSPGGVTL 235 + GD V++++ +G D+G RPVI QAL + GV+ + G VAAV GVTL Sbjct 180 VL--GDDAQVNVIIVERAGEIGPDLGAGPRPVIIQALTELGVKWKLGSGVAAVDAAGVTL 237 Query 236 SSGERLAAATVVWCAGMRASRLTEQLPVARDRLGRLQVDDYLRVIGVPAMFAAGDVAAAR 295 SGER+ A+TV+W AG RAS+LT Q+P RD GRL VD+YL+V G+ ++A GDVA A Sbjct 238 ESGERIEASTVIWTAGARASKLTAQVPAERDGFGRLHVDNYLKVRGLETVYATGDVAYAA 297 Query 296 MDDE-HLSVMSCQHGRPMGRYAGCNVINDLFDQPLLALRIPWYVTVLDLGSAGAVYTEGW 354 +DD + ++MSCQH +GR AG NV DL + P YVT LDLG GAVYTEGW Sbjct 298 VDDAGNYAMMSCQHAMNLGRSAGHNVAADLVGDKQIPYSQPKYVTCLDLGPWGAVYTEGW 357 Query 355 ERKVVSQGAPAKTTKQSINTRRIYPPLNGSRADLLAAAAPR 395 ER+V GA AK K INT IYPP + RA+ LA+A PR Sbjct 358 EREVKLVGAEAKALKTKINTEWIYPP-SADRAEALASADPR 397 >gi|330821658|ref|YP_004350520.1| putative dehydrogenase, oxidoreductase FAD flavoprotein [Burkholderia gladioli BSR3] gi|327373653|gb|AEA65008.1| putative dehydrogenase, oxidoreductase FAD flavoprotein [Burkholderia gladioli BSR3] Length=403 Score = 316 bits (809), Expect = 5e-84, Method: Compositional matrix adjust. Identities = 189/385 (50%), Positives = 237/385 (62%), Gaps = 11/385 (2%) Query 3 RVVVIGSGFAGLWAALGAARRLDELAVLAGTVDVMVVSNKPFHDIRVRNYEADLSACRIP 62 R++VIG+GFAG+W+AL +AR LD+L V++ +V+ P +R R YEAD A + P Sbjct 4 RILVIGAGFAGMWSALASARLLDQLG--RDDVEIALVAPAPELHVRPRLYEADPGAMKAP 61 Query 63 LGDVLGPAGVAHVTAEVTAIDADGRRVT---TSTGAS---YSYDRLVLASGSHVVKPALP 116 L + GV V V ID R+V T GA+ YDRLVLA+GS + +PA+ Sbjct 62 LQALFDAVGVRFVAGHVETIDVANRKVAVIGTQAGAARREIGYDRLVLAAGSRLFRPAID 121 Query 117 GLAEFGFDVDTYDGAVRLQQHLQGLAGGPLTSAAATVVVVGAGLTGIETACELPGRLHAL 176 GL F+VD + AV+L+ HL+ L P +A ATVV+ GAG TGIETA E+P RL Sbjct 122 GLDAHAFNVDQLEAAVKLEAHLKTLGQLPAGAARATVVIAGAGFTGIETAAEMPARLRET 181 Query 177 FARGDGVTPRVVLIDHNPFVGSDMGLSARPVIEQALLDNGVETRTGVSVAAVSPGGVTLS 236 G RV+L+D N +G D+G RPVI QAL + GV + G VAAV GGVTL+ Sbjct 182 L--GADAEVRVILVDRNDELGPDLGPGPRPVITQALGELGVSWKLGSGVAAVDGGGVTLA 239 Query 237 SGERLAAATVVWCAGMRASRLTEQLPVARDRLGRLQVDDYLRVIGVPAMFAAGDVAAARM 296 +GER+ AATV+W AG RAS LT Q+P RD GRL VD L+VIGV +FA GD A A Sbjct 240 NGERIEAATVIWTAGARASALTAQIPGERDGFGRLFVDRNLKVIGVEDVFATGDCAYAAT 299 Query 297 DDE-HLSVMSCQHGRPMGRYAGCNVINDLFDQPLLALRIPWYVTVLDLGSAGAVYTEGWE 355 DD + + MSCQH +GR AG N DL Q L P YVT LDLG GAVYTEGW+ Sbjct 300 DDAGNHAKMSCQHAMNLGRSAGHNAAADLLGQASLPYSQPKYVTCLDLGPWGAVYTEGWD 359 Query 356 RKVVSQGAPAKTTKQSINTRRIYPP 380 R V +GA AKT K+ IN+ IYPP Sbjct 360 RVVKLEGAQAKTLKRRINSEWIYPP 384 >gi|104781178|ref|YP_607676.1| pyridine nucleotide-disulfide oxidoreductase [Pseudomonas entomophila L48] gi|95110165|emb|CAK14872.1| putative pyridine nucleotide-disulphide oxidoreductase [Pseudomonas entomophila L48] Length=400 Score = 314 bits (805), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 174/384 (46%), Positives = 238/384 (62%), Gaps = 10/384 (2%) Query 2 TRVVVIGSGFAGLWAALGAARRLDELAVLAGTVDVMVVSNKPFHDIRVRNYEADLSACRI 61 + +++IG+GFAG+W+AL AAR LD+ G V + V++ +P IR R YEAD+ Sbjct 3 SHILIIGAGFAGVWSALSAARLLDQ--AQRGDVRISVLAPQPELRIRPRFYEADVHTLMA 60 Query 62 PLGDVLGPAGVAHVTAEVTAIDADGRRVTTSTG----ASYSYDRLVLASGSHVVKPALPG 117 P+G++L GV + ID+D R+V G YDRL+LA+GS V +PA+PG Sbjct 61 PVGELLDAVGVTFIQGSAEHIDSDARQVGYLDGNGQRQQLGYDRLILAAGSQVARPAVPG 120 Query 118 LAEFGFDVDTYDGAVRLQQHLQGLAGGPLTSAAATVVVVGAGLTGIETACELPGRLHALF 177 LAE FDVD + A+RL+QHL LA P + A TVVV G G TGIETA E+P RL A+ Sbjct 121 LAEHTFDVDQMESAMRLEQHLVALAAQPASPARNTVVVCGGGFTGIETATEMPARLRAIL 180 Query 178 ARGDGVTPRVVLIDHNPFVGSDMGLSARPVIEQALLDNGVETRTGVSVAAVSPGGVTLSS 237 G RV+L+D VG+ +G P I A GV+ T SV AV GGVTL + Sbjct 181 GEGHA---RVILVDRGQSVGAALGAGITPSIVAASEQAGVQWLTNTSVVAVDAGGVTLDN 237 Query 238 GERLAAATVVWCAGMRASRLTEQLPVARDRLGRLQVDDYLRVIGVPAMFAAGDVAAARMD 297 GE +A+ TV+W G++AS LT Q+ RD GRL+VDD+L+V+G ++A GD A A++D Sbjct 238 GEYIASKTVIWTVGVKASPLTAQIDGERDSFGRLRVDDHLKVVGQAHIYATGDTAWAKVD 297 Query 298 D-EHLSVMSCQHGRPMGRYAGCNVINDLFDQPLLALRIPWYVTVLDLGSAGAVYTEGWER 356 + + ++M+CQH PMGR++G N + DL + R P YVT LDLG GA Y+EGWER Sbjct 298 ELGNHALMTCQHAIPMGRHSGNNAMADLLGLAPVTYRQPKYVTCLDLGDWGAAYSEGWER 357 Query 357 KVVSQGAPAKTTKQSINTRRIYPP 380 ++V +G K K+ IN+ IYPP Sbjct 358 ELVLEGQEGKNLKRQINSVWIYPP 381 >gi|152983080|ref|YP_001352723.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase [Janthinobacterium sp. Marseille] gi|151283157|gb|ABR91567.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase [Janthinobacterium sp. Marseille] Length=403 Score = 312 bits (800), Expect = 6e-83, Method: Compositional matrix adjust. Identities = 178/400 (45%), Positives = 239/400 (60%), Gaps = 12/400 (3%) Query 3 RVVVIGSGFAGLWAALGAARRLDELAVLAGTVDVMVVSNKPFHDIRVRNYEADLSACRIP 62 R++VIG+GFAG+W+AL +AR LD++ V++++++ +P +R R YE + + P Sbjct 4 RILVIGAGFAGMWSALASARLLDQVG--RSDVEIILIAPEPKLHVRPRLYEQNPEGMKAP 61 Query 63 LGDVLGPAGVAHVTAEVTAIDADGRRVT-TSTGA-----SYSYDRLVLASGSHVVKPALP 116 L ++ GV + V ID + ++ T TG YDRLVLA+GS + P +P Sbjct 62 LQEIFNAVGVTFIQGLVQQIDVANQELSITETGVDTASRKIKYDRLVLAAGSRLHCPQIP 121 Query 117 GLAEFGFDVDTYDGAVRLQQHLQGLAGGPLTSAAATVVVVGAGLTGIETACELPGRLHAL 176 GL E F+VD A L+ H+ GLA ++A TVVV GAG TGIETA E+P RL + Sbjct 122 GLKEHAFNVDQIADAAVLESHIHGLAQKTESTARNTVVVAGAGFTGIETAAEMPARLREV 181 Query 177 FARGDGVTPRVVLIDHNPFVGSDMGLSARPVIEQALLDNGVETRTGVSVAAVSPGGVTLS 236 F G + V++++ +G D+G RPVI QAL + GV + G VA+V GVTL Sbjct 182 F--GQDASVNVIMVERADAIGPDLGAGPRPVITQALTELGVTWKLGSGVASVDSNGVTLE 239 Query 237 SGERLAAATVVWCAGMRASRLTEQLPVARDRLGRLQVDDYLRVIGVPAMFAAGDVAAARM 296 +GER+ A TV+W AG RAS LT Q+P RD GRL VD L+V G+ +FA GD A A Sbjct 240 NGERIDADTVIWTAGARASTLTAQIPAERDNFGRLHVDRNLKVKGLATVFATGDCAYAAT 299 Query 297 DDE-HLSVMSCQHGRPMGRYAGCNVINDLFDQPLLALRIPWYVTVLDLGSAGAVYTEGWE 355 DDE + ++MSCQH +GR AG NV DL + + YVT LDLG GAVYTEGW+ Sbjct 300 DDEGNFAMMSCQHAMNLGRSAGHNVAADLVGETPIPYSQAKYVTCLDLGPWGAVYTEGWD 359 Query 356 RKVVSQGAPAKTTKQSINTRRIYPPLNGSRADLLAAAAPR 395 R+V GA AK K INT IYPP N RA++ A PR Sbjct 360 RQVKLSGAEAKALKTKINTEWIYPP-NADRAEVFVLADPR 398 >gi|167033275|ref|YP_001668506.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase [Pseudomonas putida GB-1] gi|166859763|gb|ABY98170.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase [Pseudomonas putida GB-1] Length=398 Score = 312 bits (799), Expect = 7e-83, Method: Compositional matrix adjust. Identities = 179/384 (47%), Positives = 240/384 (63%), Gaps = 11/384 (2%) Query 2 TRVVVIGSGFAGLWAALGAARRLDELAVLAGTVDVMVVSNKPFHDIRVRNYEADLSACRI 61 + +++IG+GFAG+W+AL AAR LD+ + + V++ + IR R YEA+ + Sbjct 3 SNILIIGAGFAGVWSALSAARLLDQ--AQRDDLSISVLAPQAELRIRPRFYEANAHTLKA 60 Query 62 PLGDVLGPAGVAHVTAEVTAIDADGRRV--TTSTGA--SYSYDRLVLASGSHVVKPALPG 117 P+G++ GV +T AIDAD R V T S G SYDRL+LA+GS V +PA+PG Sbjct 61 PVGELFEAVGVRFITGNAEAIDADARNVSYTDSHGQRQQISYDRLILAAGSQVARPAVPG 120 Query 118 LAEFGFDVDTYDGAVRLQQHLQGLAGGPLTSAAATVVVVGAGLTGIETACELPGRLHALF 177 LAE FDVD + AVRL+QHL GLA P + A TVVV G G TGIETA E+P RL A+ Sbjct 121 LAEHTFDVDQMESAVRLEQHLAGLAALPASPARNTVVVCGGGFTGIETATEMPARLRAIL 180 Query 178 ARGDGVTPRVVLIDHNPFVGSDMGLSARPVIEQALLDNGVETRTGVSVAAVSPGGVTLSS 237 G RV+L+D VG+ +G +P I A GVE TG SV AV GGVTL + Sbjct 181 ----GNDVRVLLVDRGVSVGAALGAGIKPSIVAASQLAGVEWLTGTSVVAVDAGGVTLDN 236 Query 238 GERLAAATVVWCAGMRASRLTEQLPVARDRLGRLQVDDYLRVIGVPAMFAAGDVAAARMD 297 G+ +A+ TV+W G++AS LT Q+ RD GRL+VDD+L+VIG ++A GD A A +D Sbjct 237 GDYIASNTVIWTVGVKASPLTAQVAGERDNFGRLKVDDHLKVIGQQHIYATGDTAWAAVD 296 Query 298 D-EHLSVMSCQHGRPMGRYAGCNVINDLFDQPLLALRIPWYVTVLDLGSAGAVYTEGWER 356 + + ++M+CQH PMGR++G N + DL + R P YVT LDLG GA Y+EGWER Sbjct 297 EIGNHALMTCQHAIPMGRHSGNNAMADLLGVTPVVYRQPKYVTCLDLGEWGAAYSEGWER 356 Query 357 KVVSQGAPAKTTKQSINTRRIYPP 380 ++ QG K K+ IN+ IYPP Sbjct 357 ELKLQGQEGKDLKRQINSVWIYPP 380 >gi|113867756|ref|YP_726245.1| putative dehydrogenase, oxidoreductase FAD flavoprotein [Ralstonia eutropha H16] gi|113526532|emb|CAJ92877.1| putative dehydrogenase, oxidoreductase FAD flavoprotein [Ralstonia eutropha H16] Length=403 Score = 311 bits (797), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 181/400 (46%), Positives = 239/400 (60%), Gaps = 12/400 (3%) Query 3 RVVVIGSGFAGLWAALGAARRLDELAVLAGTVDVMVVSNKPFHDIRVRNYEADLSACRIP 62 R++VIG+GFAG+W+AL +AR LD++ V++ +V+ KP IR R YE + + + P Sbjct 4 RILVIGAGFAGMWSALASARLLDQVGRT--DVEIALVAPKPELHIRPRLYEQNPNGMKAP 61 Query 63 LGDVLGPAGVAHVTAEVTAIDADGRRVTTS-TGAS-----YSYDRLVLASGSHVVKPALP 116 L D+ GV + +V ID + V+ + GA SYDRLVLA+GS + +P +P Sbjct 62 LQDIFQAVGVRFIQGKVEHIDVANQTVSVAGVGADTPRQRISYDRLVLAAGSRLFRPQIP 121 Query 117 GLAEFGFDVDTYDGAVRLQQHLQGLAGGPLTSAAATVVVVGAGLTGIETACELPGRLHAL 176 GL + F+VD A L+ H+ GLA ++ TVV+ GAG TGIETA E+P RL + Sbjct 122 GLDQHAFNVDQVADAAELEAHIHGLADRRESAGRNTVVIAGAGFTGIETAAEMPARLREV 181 Query 177 FARGDGVTPRVVLIDHNPFVGSDMGLSARPVIEQALLDNGVETRTGVSVAAVSPGGVTLS 236 G+ V++++ N +G D+G RPVI QAL + GV + G VAAV GV L Sbjct 182 L--GEDAAVSVIMVERNAAIGPDLGEGPRPVITQALAELGVTWKLGSGVAAVDAKGVMLE 239 Query 237 SGERLAAATVVWCAGMRASRLTEQLPVARDRLGRLQVDDYLRVIGVPAMFAAGDVAAARM 296 +GER+ A TV+W AG RA+ LT Q+P RD GRL VD L+V GV A+FA GD A A Sbjct 240 NGERIEADTVIWTAGARANELTAQIPAERDNFGRLHVDRNLKVKGVEAVFATGDCAYAAT 299 Query 297 DDE-HLSVMSCQHGRPMGRYAGCNVINDLFDQPLLALRIPWYVTVLDLGSAGAVYTEGWE 355 DDE + + MSCQH +GR AG NV DL + P YVT LDLG GAVYTEGW Sbjct 300 DDEGNFATMSCQHAMNLGRSAGHNVAADLVGAAPIPYSQPKYVTCLDLGPWGAVYTEGWN 359 Query 356 RKVVSQGAPAKTTKQSINTRRIYPPLNGSRADLLAAAAPR 395 R+V G AK K INT IYPP + +R + LA A PR Sbjct 360 RQVKMTGGVAKALKTRINTEWIYPP-SANREEALALADPR 398 >gi|170721445|ref|YP_001749133.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase [Pseudomonas putida W619] gi|169759448|gb|ACA72764.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase [Pseudomonas putida W619] Length=399 Score = 308 bits (790), Expect = 8e-82, Method: Compositional matrix adjust. Identities = 174/383 (46%), Positives = 238/383 (63%), Gaps = 10/383 (2%) Query 2 TRVVVIGSGFAGLWAALGAARRLDELAVLAGTVDVMVVSNKPFHDIRVRNYEADLSACRI 61 + V++IG+GFAG+W+AL AAR LD+ + + V++ +P IR R YEAD+ A + Sbjct 3 SNVLIIGAGFAGVWSALSAARLLDK--ARRDDLSISVLAPQPELRIRPRFYEADVHAMKA 60 Query 62 PLGDVLGPAGVAHVTAEVTAIDADGRRVTTSTGA----SYSYDRLVLASGSHVVKPALPG 117 P+G++ GV + ID GR V+ + + +YDRL+LA+GS V +PA+ G Sbjct 61 PVGELFEAVGVQFLEGHAQTIDPQGRSVSYTDASGLPQQIAYDRLILAAGSQVARPAIAG 120 Query 118 LAEFGFDVDTYDGAVRLQQHLQGLAGGPLTSAAATVVVVGAGLTGIETACELPGRLHALF 177 +AE FDVD + AVRL+QHL GLA P + A TVVV G G TGIETA E+P RL A+ Sbjct 121 MAEHTFDVDQMESAVRLEQHLAGLAALPASPARNTVVVCGGGFTGIETATEMPARLRAVL 180 Query 178 ARGDGVTPRVVLIDHNPFVGSDMGLSARPVIEQALLDNGVETRTGVSVAAVSPGGVTLSS 237 GD RV+++D VG+ +G P I A GVE G SV AV GGVTL + Sbjct 181 --GDAAV-RVLVVDRGTRVGAALGAGITPSIVAACEQAGVEWLAGTSVVAVDAGGVTLDN 237 Query 238 GERLAAATVVWCAGMRASRLTEQLPVARDRLGRLQVDDYLRVIGVPAMFAAGDVAAARMD 297 GE +A+ TV+W G++AS LT Q+ RD GRL+VDD+L+V+G ++A GD A A +D Sbjct 238 GEYIASKTVIWTVGVKASPLTAQVAGERDNFGRLKVDDHLKVVGQAHIYATGDTAWAAVD 297 Query 298 D-EHLSVMSCQHGRPMGRYAGCNVINDLFDQPLLALRIPWYVTVLDLGSAGAVYTEGWER 356 + + ++M+CQH PMGRYAG N + DL + + R P YVT LDLG GA ++EGWER Sbjct 298 ELGNHALMTCQHAIPMGRYAGNNAMADLLGEQPVVYRQPKYVTCLDLGGWGAAFSEGWER 357 Query 357 KVVSQGAPAKTTKQSINTRRIYP 379 ++ QG K K+ INT IYP Sbjct 358 ELKLQGQEGKALKRQINTVWIYP 380 >gi|227818807|ref|YP_002822778.1| NADH dehydrogenase, FAD-containing subunit [Sinorhizobium fredii NGR234] gi|36959062|gb|AAQ87487.1| NADH Dehydrogenase [Sinorhizobium fredii NGR234] gi|227337806|gb|ACP22025.1| predicted NADH dehydrogenase, FAD-containing subunit [Sinorhizobium fredii NGR234] Length=402 Score = 308 bits (788), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 176/383 (46%), Positives = 235/383 (62%), Gaps = 8/383 (2%) Query 3 RVVVIGSGFAGLWAALGAARRLDELAVLAGTVDVMVVSNKPFHDIRVRNYEADLSACRIP 62 R+++IG+GFAG+W+ALGA R LD+ G+V+V V++ +P IR R YE + S + P Sbjct 4 RILIIGAGFAGMWSALGAMRLLDQQGKADGSVEVAVIAPQPELHIRPRLYEKNASTMKAP 63 Query 63 LGDVLGPAGVAHVTAEVTAIDADGRRVTTSTG----ASYSYDRLVLASGSHVVKPALPGL 118 L ++ AGV + TA+ VT S + Y +LVLA+GS + +P +PGL Sbjct 64 LSEIFANAGVRFIKGYATAVSTAKNSVTYSDEEGRETTIGYSKLVLATGSVLFRPDIPGL 123 Query 119 AEFGFDVDTYDGAVRLQQHLQGLAGGPLTSAAATVVVVGAGLTGIETACELPGRLHALFA 178 A F+VD A L++H+ LA P + + TVVV G G TGIETA E+P RL A Sbjct 124 AH-AFNVDQLADAAVLEEHISELARLPESRSRNTVVVAGGGFTGIETAAEMPHRLRAALG 182 Query 179 RGDGVTPRVVLIDHNPFVGSDMGLSARPVIEQALLDNGVETRTGVSVAAVSPGGVTLSSG 238 + V RVV+++ N +G D+G RPVIEQA + GVETR G + A+ P GVTL+SG Sbjct 183 KDADV--RVVVVERNDAIGPDLGPGPRPVIEQAFAELGVETRLGEGIIAIDPEGVTLASG 240 Query 239 ERLAAATVVWCAGMRASRLTEQLPVARDRLGRLQVDDYLRVIGVPAMFAAGDVAAARMDD 298 ER+ AATVVW AG RA+ +T+Q+ +D GRL VD L+VIG ++A GDVA A DD Sbjct 241 ERIDAATVVWTAGARANPITKQIDAEKDAFGRLHVDRNLKVIGHSNVYATGDVAYAATDD 300 Query 299 E-HLSVMSCQHGRPMGRYAGCNVINDLFDQPLLALRIPWYVTVLDLGSAGAVYTEGWERK 357 + + + MSCQH + +GR AG NV DL + YVT LDLG GAVYTEGW+R+ Sbjct 301 DGNRTKMSCQHAQNLGRSAGHNVAADLLGVDPIPYSQEKYVTCLDLGPWGAVYTEGWDRQ 360 Query 358 VVSQGAPAKTTKQSINTRRIYPP 380 + GA AK K INT IYPP Sbjct 361 IKLSGAEAKRLKTRINTEWIYPP 383 >gi|298290565|ref|YP_003692504.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase [Starkeya novella DSM 506] gi|296927076|gb|ADH87885.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase [Starkeya novella DSM 506] Length=401 Score = 308 bits (788), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 186/397 (47%), Positives = 235/397 (60%), Gaps = 8/397 (2%) Query 3 RVVVIGSGFAGLWAALGAARRLDELAVLAGTVDVMVVSNKPFHDIRVRNYEADLSACRIP 62 R+V+IG+GFAG++AAL AAR + V +++ +V+ +P +R R YE P Sbjct 2 RLVIIGAGFAGMYAALSAARLRNLQGVSPEELEIELVAPQPTLVVRPRLYEPKPETLTAP 61 Query 63 LGDVLGPAGVAHVTAEVTAIDADGRRVTTSTGA----SYSYDRLVLASGSHVVKPALPGL 118 L VL V +V +D V TG + +YDRLVLA+GS + +P +PG+ Sbjct 62 LLPVLEEIDVRYVQGTAETVDTRSNSVGIVTGGGERRTLAYDRLVLATGSRLFRPDIPGV 121 Query 119 AEFGFDVDTYDGAVRLQQHLQGLAGGPLTSAAATVVVVGAGLTGIETACELPGRLHALFA 178 AE F VD D AV L +HL LA P ++A TVVV G G TGIE A E+P RL + Sbjct 122 AEHVFSVDQLDDAVALDRHLHALARRPASAARDTVVVAGGGFTGIEAATEMPARLRTIL- 180 Query 179 RGDGVTPRVVLIDHNPFVGSDMGLSARPVIEQALLDNGVETRTGVSVAAVSPGGVTLSSG 238 GD RVV++D N + DMG RPVIE AL GVETR G VAAV GVTL+ G Sbjct 181 -GDKAGIRVVIVDRNDAIAPDMGAGPRPVIENALRKVGVETRLGAGVAAVDADGVTLAGG 239 Query 239 ERLAAATVVWCAGMRASRLTEQLPVARDRLGRLQVDDYLRVIGVPAMFAAGDVAAARMDD 298 ER+ +ATV+W AGMRA+ LT+Q+P RD GRL VD LRV GV +FA GD A A DD Sbjct 240 ERIESATVIWAAGMRAAPLTQQIPAERDNSGRLLVDRALRVPGVGGVFATGDAAKAACDD 299 Query 299 -EHLSVMSCQHGRPMGRYAGCNVINDLFDQPLLALRIPWYVTVLDLGSAGAVYTEGWERK 357 + ++MSCQH MG +AG N +L P +A YVT LDLG AGA++T GW+R+ Sbjct 300 IGNYALMSCQHATRMGAFAGHNAAAELLGVPTIAYHQEAYVTCLDLGDAGALFTRGWDRQ 359 Query 358 VVSQGAPAKTTKQSINTRRIYPPLNGSRADLLAAAAP 394 V GA AK KQ INT IYPP R LA+A P Sbjct 360 VEFVGAEAKKMKQEINTVWIYPP-RAQRNVALASAEP 395 >gi|209885882|ref|YP_002289739.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase [Oligotropha carboxidovorans OM5] gi|337740540|ref|YP_004632268.1| NADH dehydrogenase-like protein [Oligotropha carboxidovorans OM5] gi|209874078|gb|ACI93874.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase [Oligotropha carboxidovorans OM5] gi|336094625|gb|AEI02451.1| NADH dehydrogenase-like protein Rv1812c/MT1860 [Oligotropha carboxidovorans OM4] gi|336098204|gb|AEI06027.1| NADH dehydrogenase-like protein Rv1812c/MT1860 [Oligotropha carboxidovorans OM5] Length=401 Score = 307 bits (787), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 190/383 (50%), Positives = 236/383 (62%), Gaps = 7/383 (1%) Query 3 RVVVIGSGFAGLWAALGAARRLDELAVLAGTVDVMVVSNKPFHDIRVRNYEADLSACRIP 62 R+V+IG+GFAG++AAL AAR D V +++M+V+ +P IR R YE + P Sbjct 2 RIVIIGAGFAGMYAALSAARLRDIEGVSPAGLEIMLVAPEPTLVIRPRLYEQNPETLTAP 61 Query 63 LGDVLGPAGVAHVTAEVTAIDADGR--RVTTSTGA--SYSYDRLVLASGSHVVKPALPGL 118 L DVL V +V AID V T+ GA S SYDRLV+ASGS + +P +PGL Sbjct 62 LQDVLAAINVVYVQGRAEAIDPASHTVEVATTNGANKSLSYDRLVVASGSQLFRPNIPGL 121 Query 119 AEFGFDVDTYDGAVRLQQHLQGLAGGPLTSAAATVVVVGAGLTGIETACELPGRLHALFA 178 AE F VD D A+ L +HL+ LAG P + A TVVVVGAG TGIE A E+P RLH +F Sbjct 122 AEHAFSVDQLDDAIALDRHLKILAGRPASPARDTVVVVGAGFTGIEAATEIPARLHTIF- 180 Query 179 RGDGVTPRVVLIDHNPFVGSDMGLSARPVIEQALLDNGVETRTGVSVAAVSPGGVTLSSG 238 G PRV++ID N V DMG RP++E AL G+ETR G VA++ G+TLSSG Sbjct 181 -GAKANPRVIIIDRNEAVVPDMGSGPRPIVEDALRKLGIETRLGAGVASLDTSGITLSSG 239 Query 239 ERLAAATVVWCAGMRASRLTEQLPVARDRLGRLQVDDYLRVIGVPAMFAAGDVAAARMDD 298 E + ATV+W AG+RA+ LT Q+PV RD GRL VD LRV GV +FA GD A A DD Sbjct 240 EHIETATVIWAAGIRANPLTAQIPVERDNFGRLIVDRDLRVPGVADVFATGDAAKAACDD 299 Query 299 E-HLSVMSCQHGRPMGRYAGCNVINDLFDQPLLALRIPWYVTVLDLGSAGAVYTEGWERK 357 + ++MSCQH MG +AG N +L P YVT LDLG AGA++T GW+ K Sbjct 300 AGNFALMSCQHATRMGAFAGNNAAAELLGVPTRPYHQEAYVTCLDLGEAGALFTRGWDHK 359 Query 358 VVSQGAPAKTTKQSINTRRIYPP 380 V G AK TKQ INT IYPP Sbjct 360 VEMVGDGAKKTKQEINTVWIYPP 382 >gi|293607995|ref|ZP_06690298.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292828568|gb|EFF86930.1| conserved hypothetical protein [Acinetobacter sp. SH024] Length=401 Score = 302 bits (774), Expect = 5e-80, Method: Compositional matrix adjust. Identities = 175/397 (45%), Positives = 234/397 (59%), Gaps = 10/397 (2%) Query 3 RVVVIGSGFAGLWAALGAARRLDELAVLAGTVDVMVVSNKPFHDIRVRNYEADLSACRIP 62 R+++ GSGFAGLWAAL AA+R LA ++V++VS+ P IR R YEA L Sbjct 4 RIIIAGSGFAGLWAAL-AAQRAIHLASQEQNIEVLMVSSSPNVGIRPRLYEAVLENMNPD 62 Query 63 LGDVLGPAGVAHVTAEVTAIDADGRRV----TTSTGASYSYDRLVLASGSHVVKPALPGL 118 + ++L GV + V I+AD + + T S+ + SYDR +LA+GS P +PGL Sbjct 63 ISELLSVVGVKFLAGWVDKINADQQTIEVSTTDSSKQTLSYDRFILATGSTTFMPPIPGL 122 Query 119 AEFGFDVDTYDGAVRLQQHLQGLAGGPLTSAAATVVVVGAGLTGIETACELPGRLHALFA 178 E+GF V T + A +L QHL+ LA P +A TVVV G G+TG+ET E+P RL ++ Sbjct 123 KEYGFSVSTLEDAEKLDQHLKNLANKPANAARNTVVVAGGGMTGLETVTEMPERLRSILD 182 Query 179 RGDGVTPRVVLIDHNPFVGSDMGLSARPVIEQALLDNGVETRTGVSVAAVSPGGVTLSSG 238 D RVVL+D + +G+ MG A VI +AL + GVE + G+ V A+ GVTLS+G Sbjct 183 ETDA---RVVLVDSSTEIGAAMGDQAATVIREALTELGVEGKAGLRVTALDATGVTLSNG 239 Query 239 ERLAAATVVWCAGMRASRLTEQLPVARDRLGRLQVDDYLRVIGVPAMFAAGDVAAARMDD 298 E++ A TV+W AGMRA+ LT Q+ +D LGRL D YL +F GD DD Sbjct 240 EKIKAETVIWTAGMRANSLTSQIAGEKDNLGRLIGDVYLHAPEAKNIFVTGDTVKVPTDD 299 Query 299 -EHLSVMSCQHGRPMGRYAGCNVINDLFDQPLLALRIPWYVTVLDLGSAGAVYTEGWERK 357 + +VMSCQH +GR AG N +L D PL A P YVT +DLG GA+Y+EGW+R+ Sbjct 300 LGNFNVMSCQHAMSLGRVAGYNAAAELVDLPLHAYSQPKYVTCVDLGPWGALYSEGWDRQ 359 Query 358 VVSQGAPAKTTKQSINTRRIYPPLNGSRADLLAAAAP 394 V AK KQ INT IYPP+ R + A A P Sbjct 360 VQFVREEAKKIKQEINTVWIYPPV-ADREAVFAIANP 395 >gi|115376132|ref|ZP_01463376.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase [Stigmatella aurantiaca DW4/3-1] gi|115366855|gb|EAU65846.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase [Stigmatella aurantiaca DW4/3-1] Length=418 Score = 302 bits (774), Expect = 6e-80, Method: Compositional matrix adjust. Identities = 174/389 (45%), Positives = 226/389 (59%), Gaps = 20/389 (5%) Query 3 RVVVIGSGFAGLWAALGAARRLDELAVLAGTVDVMVVSNKPFHDIRVRNYEADLSACRIP 62 ++V+ GSGFAG+WAA+ AAR + LA V++ +VS P IR R YE Sbjct 20 KIVIAGSGFAGMWAAISAARAVS-LAGKENEVEITIVSPSPHLHIRPRLYETVFEEMAPD 78 Query 63 LGDVLGPAGVAHVTAEVTAIDA----------DGRRVTTSTGASYSYDRLVLASGSHVVK 112 L + GV H+ V AI A DG+R T YDR VLA+GS + Sbjct 79 LAPLFKAIGVRHLAGTVEAIHAGSHQVEVLGADGQRTT------LPYDRFVLAAGSRLFM 132 Query 113 PALPGLAEFGFDVDTYDGAVRLQQHLQGLAGGPLTSAAATVVVVGAGLTGIETACELPGR 172 P +PGL E F+VD A+ L HL+ LA P T+A TVVV G G TGIETA E+P R Sbjct 133 PNVPGLKEHAFNVDQLSSAMALDAHLKALAHKPETAARNTVVVAGGGFTGIETATEMPQR 192 Query 173 LHALFARGDGVTPRVVLIDHNPFVGSDMGLSARPVIEQALLDNGVETRTGVSVAAVSPGG 232 L A+F G RVV+++ P +G D+G RP+IE+AL + GVE RT A+ G Sbjct 193 LRAIF--GQDAKIRVVVVEQAPVIGPDLGPVPRPIIEEALAECGVEVRTSTGATAIDAKG 250 Query 233 VTLSSGERLAAATVVWCAGMRASRLTEQLPVARDRLGRLQVDDYLRVIGVPAMFAAGDVA 292 VTLS+GER+ TVVW AG RA+ L Q+ DR GR+ D YLR V +F GDVA Sbjct 251 VTLSTGERIDTQTVVWTAGSRANPLAAQIEGEHDRFGRVHADPYLRAKSVKDIFVTGDVA 310 Query 293 AARMDDE-HLSVMSCQHGRPMGRYAGCNVINDLFDQPLLALRIPWYVTVLDLGSAGAVYT 351 A DD+ +++ MSCQH +GR+AG N +L P+ R P YVT LDLG+ GA++T Sbjct 311 LAATDDQGNVASMSCQHAIRLGRFAGHNAAAELVGLPVQPYRQPRYVTCLDLGAWGAIFT 370 Query 352 EGWERKVVSQGAPAKTTKQSINTRRIYPP 380 EGW+R+V + A K TK+ INT+ IYPP Sbjct 371 EGWDRQVRLKRAEGKATKREINTKWIYPP 399 >gi|340519204|gb|EGR49443.1| predicted protein [Trichoderma reesei QM6a] Length=406 Score = 302 bits (774), Expect = 6e-80, Method: Compositional matrix adjust. Identities = 181/384 (48%), Positives = 239/384 (63%), Gaps = 8/384 (2%) Query 3 RVVVIGSGFAGLWAALGAARRLDELAVLAGT-VDVMVVSNKPFHDIRVRNYEADLSACRI 61 R+V++GSGF+GL++AL A R +++ G+ +DV++V+ +P R R YEA+ + + Sbjct 4 RIVIVGSGFSGLYSALAARRLIEQHKDRVGSGIDVVMVAPEPKLVTRPRLYEANAAGMSV 63 Query 62 PLGDVLGPAGVAHVTAEVTAIDADGRRVT----TSTGASYSYDRLVLASGSHVVKPALPG 117 PLG++L GV V V AI ++V T + SYDRLVLA+GS VVKP +PG Sbjct 64 PLGELLTATGVKFVRGIVDAIRTADKQVEVVDPTGERMTLSYDRLVLAAGSRVVKPKIPG 123 Query 118 LAEFGFDVDTYDGAVRLQQHLQGLAGGPLTSAAATVVVVGAGLTGIETACELPGRLHALF 177 L E F +DT A L+ HL+ LA P +SA TVVV G G TGIE A ELP RL A+ Sbjct 124 LREHAFSIDTIAEAAELEAHLKRLASLPSSSARNTVVVCGGGFTGIELAAELPRRLRAIL 183 Query 178 ARGDGVTPRVVLIDHNPFVGSDMGLSARPVIEQALLDNGVETRTGVSVAAVSPGGVTLSS 237 G+ V VV+++ +G D+G + RPVI +AL D VET+ G +VA++ GGVT +S Sbjct 184 GMGEKVR--VVVVEKTDVIGPDLGPNPRPVIAKALADLEVETKLGNAVASIDKGGVTTAS 241 Query 238 GERLAAATVVWCAGMRASRLTEQLPVARDRLGRLQVDDYLRVIGVPAMFAAGDVAAARMD 297 GER+ A TVVW AG+ A+ LT Q+P +DR GRL VD LRV P +FA GD A A D Sbjct 242 GERIDAMTVVWTAGVEATPLTRQIPGDKDRQGRLLVDSDLRVPSTPDVFATGDAACAETD 301 Query 298 DE-HLSVMSCQHGRPMGRYAGCNVINDLFDQPLLALRIPWYVTVLDLGSAGAVYTEGWER 356 D+ + ++MSCQH P+GR AG N DL R P+Y T LDLGS GAV +GW+R Sbjct 302 DQGNHTLMSCQHAMPLGRSAGHNAAADLLGVQGQPYRQPYYGTCLDLGSWGAVVCDGWDR 361 Query 357 KVVSQGAPAKTTKQSINTRRIYPP 380 KV+ G PAK K IN IYPP Sbjct 362 KVLKSGGPAKEIKGWINGWVIYPP 385 >gi|310824817|ref|YP_003957175.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase [Stigmatella aurantiaca DW4/3-1] gi|309397889|gb|ADO75348.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase [Stigmatella aurantiaca DW4/3-1] Length=425 Score = 302 bits (774), Expect = 6e-80, Method: Compositional matrix adjust. Identities = 174/389 (45%), Positives = 226/389 (59%), Gaps = 20/389 (5%) Query 3 RVVVIGSGFAGLWAALGAARRLDELAVLAGTVDVMVVSNKPFHDIRVRNYEADLSACRIP 62 ++V+ GSGFAG+WAA+ AAR + LA V++ +VS P IR R YE Sbjct 27 KIVIAGSGFAGMWAAISAARAVS-LAGKENEVEITIVSPSPHLHIRPRLYETVFEEMAPD 85 Query 63 LGDVLGPAGVAHVTAEVTAIDA----------DGRRVTTSTGASYSYDRLVLASGSHVVK 112 L + GV H+ V AI A DG+R T YDR VLA+GS + Sbjct 86 LAPLFKAIGVRHLAGTVEAIHAGSHQVEVLGADGQRTT------LPYDRFVLAAGSRLFM 139 Query 113 PALPGLAEFGFDVDTYDGAVRLQQHLQGLAGGPLTSAAATVVVVGAGLTGIETACELPGR 172 P +PGL E F+VD A+ L HL+ LA P T+A TVVV G G TGIETA E+P R Sbjct 140 PNVPGLKEHAFNVDQLSSAMALDAHLKALAHKPETAARNTVVVAGGGFTGIETATEMPQR 199 Query 173 LHALFARGDGVTPRVVLIDHNPFVGSDMGLSARPVIEQALLDNGVETRTGVSVAAVSPGG 232 L A+F G RVV+++ P +G D+G RP+IE+AL + GVE RT A+ G Sbjct 200 LRAIF--GQDAKIRVVVVEQAPVIGPDLGPVPRPIIEEALAECGVEVRTSTGATAIDAKG 257 Query 233 VTLSSGERLAAATVVWCAGMRASRLTEQLPVARDRLGRLQVDDYLRVIGVPAMFAAGDVA 292 VTLS+GER+ TVVW AG RA+ L Q+ DR GR+ D YLR V +F GDVA Sbjct 258 VTLSTGERIDTQTVVWTAGSRANPLAAQIEGEHDRFGRVHADPYLRAKSVKDIFVTGDVA 317 Query 293 AARMDDE-HLSVMSCQHGRPMGRYAGCNVINDLFDQPLLALRIPWYVTVLDLGSAGAVYT 351 A DD+ +++ MSCQH +GR+AG N +L P+ R P YVT LDLG+ GA++T Sbjct 318 LAATDDQGNVASMSCQHAIRLGRFAGHNAAAELVGLPVQPYRQPRYVTCLDLGAWGAIFT 377 Query 352 EGWERKVVSQGAPAKTTKQSINTRRIYPP 380 EGW+R+V + A K TK+ INT+ IYPP Sbjct 378 EGWDRQVRLKRAEGKATKREINTKWIYPP 406 >gi|239504202|ref|ZP_04663512.1| NADH dehydrogenase, FAD-containing subunit [Acinetobacter baumannii AB900] Length=401 Score = 302 bits (774), Expect = 7e-80, Method: Compositional matrix adjust. Identities = 176/397 (45%), Positives = 231/397 (59%), Gaps = 10/397 (2%) Query 3 RVVVIGSGFAGLWAALGAARRLDELAVLAGTVDVMVVSNKPFHDIRVRNYEADLSACRIP 62 R+++ GSGFAGLWAAL AA+R LA ++VM+VS P IR R YEA L Sbjct 4 RIIIAGSGFAGLWAAL-AAQRAIHLASQEQNIEVMMVSPSPNVGIRPRLYEAVLENMNPE 62 Query 63 LGDVLGPAGVAHVTAEVTAIDADGRRVTTST----GASYSYDRLVLASGSHVVKPALPGL 118 + ++L GV + V ID++ + + ST + SYDR +LA+GS PA+PGL Sbjct 63 ISELLSVVGVKFLAGWVNKIDSNQQTIEVSTTDGSKQTLSYDRFILATGSTTFMPAIPGL 122 Query 119 AEFGFDVDTYDGAVRLQQHLQGLAGGPLTSAAATVVVVGAGLTGIETACELPGRLHALFA 178 E+GF V T + A +L HL+ LA P +A TVVV G GLTG+ET E+P RL ++ Sbjct 123 TEYGFSVSTLEDAEKLNHHLKNLANKPANAARNTVVVAGGGLTGLETVTEMPERLRSILG 182 Query 179 RGDGVTPRVVLIDHNPFVGSDMGLSARPVIEQALLDNGVETRTGVSVAAVSPGGVTLSSG 238 D RVVL+D + +G+ MG A VI +AL + GVE + G+ V A+ GVTLS+G Sbjct 183 ETD---IRVVLVDSSAEIGAAMGDQAATVIREALNELGVEGKAGLRVNALDATGVTLSNG 239 Query 239 ERLAAATVVWCAGMRASRLTEQLPVARDRLGRLQVDDYLRVIGVPAMFAAGDVAAARMDD 298 E++ TV+W AGMRA+ LT Q+ +D LGR+ D YL +F GD DD Sbjct 240 EKIETETVIWTAGMRANSLTSQIAGEKDNLGRILGDAYLHAPEAKNIFVTGDTVKVPTDD 299 Query 299 -EHLSVMSCQHGRPMGRYAGCNVINDLFDQPLLALRIPWYVTVLDLGSAGAVYTEGWERK 357 + +VMSCQH +GR AG N +L D PL A P YVT +DLG GA+YTEGW+RK Sbjct 300 LGNFNVMSCQHAMSLGRVAGYNAAAELVDLPLHAYSQPKYVTCVDLGPWGALYTEGWDRK 359 Query 358 VVSQGAPAKTTKQSINTRRIYPPLNGSRADLLAAAAP 394 V AK KQ INT IYPP+ R + A A P Sbjct 360 VQFVRHEAKKIKQEINTVWIYPPV-ADREAVFAIANP 395 >gi|77458676|ref|YP_348182.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase [Pseudomonas fluorescens Pf0-1] gi|77382679|gb|ABA74192.1| putative NADH dehydrogenase FAD-containing subunit [Pseudomonas fluorescens Pf0-1] Length=400 Score = 301 bits (772), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 175/383 (46%), Positives = 234/383 (62%), Gaps = 9/383 (2%) Query 3 RVVVIGSGFAGLWAALGAARRLDELAVLAGTVDVMVVSNKPFHDIRVRNYEADLSACRIP 62 ++VIG+GF G+W+AL AAR LD+ V + V++ + IR R YE D+ + P Sbjct 4 HILVIGAGFGGVWSALSAARLLDQHD--RNDVQITVLAPQAELRIRPRFYEPDVHNMKAP 61 Query 63 LGDVLGPAGVAHVTAEVTAIDADGRRVTTS----TGASYSYDRLVLASGSHVVKPALPGL 118 LG++ GV V ID ++VT S T + +YDRLVLA+GS V++P L G+ Sbjct 62 LGELFDAVGVKFVKGIADNIDTASKQVTYSDAFGTQGTLNYDRLVLAAGSRVIRPPLKGM 121 Query 119 AEFGFDVDTYDGAVRLQQHLQGLAGGPLTSAAATVVVVGAGLTGIETACELPGRLHALFA 178 E FDVD + A RL+ H++ L P ++A TVVV G G TGIETA E+P RL A A Sbjct 122 IEHAFDVDQIEEAARLEAHIKSLKDQPSSAARNTVVVAGGGFTGIETATEMPARLRA--A 179 Query 179 RGDGVTPRVVLIDHNPFVGSDMGLSARPVIEQALLDNGVETRTGVSVAAVSPGGVTLSSG 238 GD RV+++D P + + +G RP I +A + G+E SVA+V GGVTL+ G Sbjct 180 LGDDAPIRVIVVDRAPQIAATLGDGIRPSIVEASRELGIEWVVDASVASVDAGGVTLADG 239 Query 239 ERLAAATVVWCAGMRASRLTEQLPVARDRLGRLQVDDYLRVIGVPAMFAAGDVAAARMDD 298 +R+ + TV+W G RAS LTEQ+P +RD GRL VD +L+V+G +FAAGDVA A DD Sbjct 240 KRIESNTVIWTVGFRASPLTEQIPGSRDPQGRLHVDGHLKVLGHVDVFAAGDVAYAATDD 299 Query 299 -EHLSVMSCQHGRPMGRYAGCNVINDLFDQPLLALRIPWYVTVLDLGSAGAVYTEGWERK 357 + + MSCQH +GRYAG NV DL + R P YVT LDLG+ GAV+TEGW+R+ Sbjct 300 LGNYAAMSCQHAISLGRYAGNNVAADLIGVAPVTYRQPKYVTCLDLGAWGAVFTEGWDRQ 359 Query 358 VVSQGAPAKTTKQSINTRRIYPP 380 + G AK K INT IYPP Sbjct 360 LKLVGQEAKDLKTQINTVWIYPP 382 >gi|170691047|ref|ZP_02882213.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase [Burkholderia graminis C4D1M] gi|170144296|gb|EDT12458.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase [Burkholderia graminis C4D1M] Length=402 Score = 300 bits (769), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 174/397 (44%), Positives = 237/397 (60%), Gaps = 8/397 (2%) Query 3 RVVVIGSGFAGLWAALGAARRLDELAVLAGTVDVMVVSNKPFHDIRVRNYEADLSACRIP 62 +++++G+GFAG+W ALGAAR D AG +D+ ++S KP +IR R YE++ P Sbjct 4 KILIVGAGFAGVWGALGAARVRDRADATAGDIDITLISPKPELEIRPRMYESEPHLMSAP 63 Query 63 LGDVLGPAGVAHVTAEVTAIDADGR--RVTTSTGASYS--YDRLVLASGSHVVKPALPGL 118 L +L GV +V V I + RV ++GA+ + YDRL+L SGS + +P++PGL Sbjct 64 LLPLLDAVGVNYVEGSVDEIAVGEKTVRVIAASGATRTLGYDRLLLTSGSKLSRPSIPGL 123 Query 119 AEFGFDVDTYDGAVRLQQHLQGLAGGPLTSAAATVVVVGAGLTGIETACELPGRLHALFA 178 AE+ F VD + A L+ HL+ LA P +SA TV VVG G TGIE A ELP R+ ALF Sbjct 124 AEYAFSVDCMEDASALEGHLKELAKLPDSSARNTVAVVGCGFTGIEIATELPKRMRALF- 182 Query 179 RGDGVTPRVVLIDHNPFVGSDMGLSARPVIEQALLDNGVETRTGVSVAAVSPGGVTLSSG 238 G +V+++ +G D+G + RP + +A G+E G SV +V GV +SG Sbjct 183 -GPDAAIKVIVVGSQADIGPDLGPNPRPFVAEAFASLGIEAVLGSSVVSVDASGVRTASG 241 Query 239 ERLAAATVVWCAGMRASRLTEQLPVARDRLGRLQVDDYLRVIGVPAMFAAGDVAAARMDD 298 + + A TVVW GMRAS L Q+ D LGR++V LRV P +F AGDVA R DD Sbjct 242 KHIEAHTVVWAGGMRASTLAAQVSSRLDPLGRVEVAPDLRVEEAPGVFVAGDVARVRSDD 301 Query 299 E-HLSVMSCQHGRPMGRYAGCNVINDLFDQPLLALRIPWYVTVLDLGSAGAVYTEGWERK 357 + H ++MSCQH MG++ G NV DL + A P+Y T LDLG GAVY+EGW+R+ Sbjct 302 QGHYALMSCQHAMVMGKFGGHNVAADLIGESTFAYTQPFYATCLDLGEWGAVYSEGWDRQ 361 Query 358 VVSQGAPAKTTKQSINTRRIYPPLNGSRADLLAAAAP 394 + A K KQ INT+ IYPP +RAD AA P Sbjct 362 IKLTHAEGKARKQMINTQWIYPPAP-NRADAFAAGDP 397 >gi|209516812|ref|ZP_03265663.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase [Burkholderia sp. H160] gi|209502775|gb|EEA02780.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase [Burkholderia sp. H160] Length=402 Score = 300 bits (769), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 174/397 (44%), Positives = 234/397 (59%), Gaps = 8/397 (2%) Query 3 RVVVIGSGFAGLWAALGAARRLDELAVLAGTVDVMVVSNKPFHDIRVRNYEADLSACRIP 62 +++++G+GFAG+W ALGAAR LD AG +++ ++S KP IR R YE++ P Sbjct 4 KILIVGAGFAGVWGALGAARELDRAGATAGAIEITLISPKPELQIRPRMYESEPHLMFAP 63 Query 63 LGDVLGPAGVAHVTAEVTAIDADGR--RVTTSTGASYS--YDRLVLASGSHVVKPALPGL 118 L +L GV +V V I + RVT ++G + + YDRL+L SGS + +P++PGL Sbjct 64 LLPLLDAVGVNYVEGSVDEIAVRDKTVRVTAASGETRTLGYDRLLLTSGSKLSRPSIPGL 123 Query 119 AEFGFDVDTYDGAVRLQQHLQGLAGGPLTSAAATVVVVGAGLTGIETACELPGRLHALFA 178 E+ F VD + A L +HL+ LA P +SA TV VVG G TGIE A ELP R+ LF Sbjct 124 TEYAFSVDCMEDASALDEHLKKLAKLPDSSARNTVAVVGCGFTGIEIATELPKRMRVLF- 182 Query 179 RGDGVTPRVVLIDHNPFVGSDMGLSARPVIEQALLDNGVETRTGVSVAAVSPGGVTLSSG 238 G +V+++ +G D+G + RP + +A G+E G SV +V GV +SG Sbjct 183 -GPDAAIKVIVVGSQAEIGPDLGPNPRPFVAEAFDSLGIEAVLGSSVVSVDASGVRTASG 241 Query 239 ERLAAATVVWCAGMRASRLTEQLPVARDRLGRLQVDDYLRVIGVPAMFAAGDVAAARMDD 298 + A TVVW GMRAS L Q+ D LGR++V LRV P +F AGDVA R DD Sbjct 242 AHIEAHTVVWAGGMRASTLAAQVSSRLDPLGRVEVAPDLRVEDAPGVFVAGDVARVRSDD 301 Query 299 E-HLSVMSCQHGRPMGRYAGCNVINDLFDQPLLALRIPWYVTVLDLGSAGAVYTEGWERK 357 E H ++MSCQH MG++ G NV DL LA P+Y T LDLG GAVY+EGW+R+ Sbjct 302 EGHYALMSCQHAMVMGKFGGHNVAADLLGASTLAYSQPFYATCLDLGEWGAVYSEGWDRQ 361 Query 358 VVSQGAPAKTTKQSINTRRIYPPLNGSRADLLAAAAP 394 + A K KQ INT+ IYPP +RAD AA P Sbjct 362 IKLTHAEGKARKQMINTQWIYPPAP-NRADAFAAGDP 397 >gi|182677318|ref|YP_001831464.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase [Beijerinckia indica subsp. indica ATCC 9039] gi|182633201|gb|ACB93975.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase [Beijerinckia indica subsp. indica ATCC 9039] Length=402 Score = 300 bits (768), Expect = 3e-79, Method: Compositional matrix adjust. Identities = 177/368 (49%), Positives = 222/368 (61%), Gaps = 8/368 (2%) Query 32 GTVDVMVVSNKPFHDIRVRNYEADLSACRIPLGDVLGPAGVAHVTAEVTAIDADGRR--V 89 G V+V+VVS P IR R YEA L R + +L GV H+ V AIDA R+ V Sbjct 32 GEVEVIVVSPTPNVTIRPRLYEAALVNMRPDIAPLLDAVGVRHIAGRVEAIDAKSRQITV 91 Query 90 TTSTGA--SYSYDRLVLASGSHVVKPALPGLAEFGFDVDTYDGAVRLQQHLQGLAGGPLT 147 TT+ GA + +YDR +LA+GS +P +PGLA++GF+ D A +L HL+ LAG P T Sbjct 92 TTANGARETLAYDRFILAAGSQTFRPPVPGLADYGFETDQLASAQKLHTHLKALAGLPET 151 Query 148 SAAATVVVVGAGLTGIETACELPGRLHALFARGDGVTPRVVLIDHNPFVGSDMGLSARPV 207 A TVV+ G GLTG+ETA E+PGRL A G T RV+++D+ VG+ +G A P Sbjct 152 EARNTVVIAGGGLTGLETATEMPGRLRASL--GPDATLRVIIVDNAEPVGASLGAEALPF 209 Query 208 IEQALLDNGVETRTGVSVAAVSPGGVTLSSGERLAAATVVWCAGMRASRLTEQLPVARDR 267 IE+AL ++GVETR G VA++ GVTLSSGER+A TVVW AGMRAS L QLP D+ Sbjct 210 IEEALAEDGVETRPGARVASIDADGVTLSSGERIATNTVVWTAGMRASPLAAQLPGEHDQ 269 Query 268 LGRLQVDDYLRVIGVPAMFAAGDVAAARMDDE-HLSVMSCQHGRPMGRYAGCNVINDLFD 326 LGR+ D YLR +F GD DD+ + +VMSCQH +GR AG N +L Sbjct 270 LGRVVGDAYLRAPEAEGIFVTGDTVKVATDDQGNFNVMSCQHAMSLGRVAGYNAAAELVG 329 Query 327 QPLLALRIPWYVTVLDLGSAGAVYTEGWERKVVSQGAPAKTTKQSINTRRIYPPLNGSRA 386 PL P YVT LDLG GA+YTEGW+R+V A K KQ INT IYPP R Sbjct 330 LPLHPYSQPKYVTCLDLGPWGALYTEGWDRQVRFTRADGKKIKQDINTVWIYPP-KPDRD 388 Query 387 DLLAAAAP 394 + A A P Sbjct 389 TVFAIANP 396 >gi|154252804|ref|YP_001413628.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase [Parvibaculum lavamentivorans DS-1] gi|154156754|gb|ABS63971.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase [Parvibaculum lavamentivorans DS-1] Length=403 Score = 298 bits (763), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 184/398 (47%), Positives = 240/398 (61%), Gaps = 8/398 (2%) Query 3 RVVVIGSGFAGLWAALGAARRLDELAVLAGTVDVMVVSNKPFHDIRVRNYEADLSACRIP 62 R+++IG+GFAG++AAL AAR D V + +++ +V+ +P IR R YE + P Sbjct 4 RLLIIGAGFAGMYAALSAARLRDAEGVPSDELEIALVAPEPRLVIRPRLYEPNPETLTAP 63 Query 63 LGDVLGPAGVAHVTAEVTAIDADGR--RVTTSTGA--SYSYDRLVLASGSHVVKPALPGL 118 L +V V ++ V ID R + + GA + +YDRLV+A+GS + +P +PGL Sbjct 64 LDEVFKAIDVVYLQGNVETIDTSVRTAEILGADGARSTITYDRLVVATGSRLFRPDIPGL 123 Query 119 AEFGFDVDTYDGAVRLQQHLQGLAGGPLTSAAATVVVVGAGLTGIETACELPGRLHALFA 178 ++ GF VD YD AV L +HL LA P ++ TVVV G G TGIE A E+P RL A+ Sbjct 124 SKHGFSVDQYDQAVALDRHLHRLADRPASATRNTVVVAGGGFTGIEVATEMPERLRAILG 183 Query 179 RGDGVTPRVVLIDHNPFVGSDMGLSARPVIEQALLDNGVETRTGVSVAAVSPGGVTLSSG 238 + RVV+++ N V +MG RP+IE AL D G+ETR GV VAA+ GVTLS G Sbjct 184 MDAAI--RVVIVERNGTVAPEMGSDPRPIIEAALRDLGIETRLGVGVAALDESGVTLSDG 241 Query 239 ERLAAATVVWCAGMRASRLTEQLPVARDRLGRLQVDDYLRVIGVPAMFAAGDVAAARMDD 298 E + +ATV+W AGMRA+ LT Q+P DRLGRL VD LRV GVP +FA GD A A DD Sbjct 242 EHIESATVIWAAGMRAAPLTAQIPAELDRLGRLPVDRELRVHGVPGVFATGDAAKAACDD 301 Query 299 -EHLSVMSCQHGRPMGRYAGCNVINDLFDQPLLALRIPWYVTVLDLGSAGAVYTEGWERK 357 H ++MSCQH MG +AG N +L YVT LDLG+AGAV+T GW+ Sbjct 302 IGHDALMSCQHATRMGAFAGNNAAAELLGVSTSPYHQEAYVTCLDLGAAGAVFTRGWDCM 361 Query 358 VVSQGAPAKTTKQSINTRRIYPPLNGSRADLLAAAAPR 395 V G AK TKQ INT IYPP +R LA+A P Sbjct 362 VEMAGETAKKTKQEINTIWIYPP-KANREIALASADPE 398 >gi|113867757|ref|YP_726246.1| putative dehydrogenase, oxidoreductase FAD flavoprotein [Ralstonia eutropha H16] gi|113526533|emb|CAJ92878.1| putative dehydrogenase, oxidoreductase FAD flavoprotein [Ralstonia eutropha H16] Length=403 Score = 298 bits (762), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 181/399 (46%), Positives = 239/399 (60%), Gaps = 12/399 (3%) Query 3 RVVVIGSGFAGLWAALGAARRLDELAVLAGTVDVMVVSNKPFHDIRVRNYEADLSACRIP 62 R+VVIG+GFAG+W+ALG+AR LDE+ V++++V+ +P +R R YE + R P Sbjct 4 RIVVIGAGFAGMWSALGSARLLDEVG--RTDVEIVLVAPEPELHVRPRLYEKNPGGMRAP 61 Query 63 LGDVLGPAGVAHVTAEVTAIDADGRRVT------TSTGASYSYDRLVLASGSHVVKPALP 116 L ++ GV + V ID ++V ++ YDRLVLA+GS + +P +P Sbjct 62 LQEIFQAVGVRFIQGLVERIDVVSQKVELVGLGGDTSRRKLGYDRLVLAAGSRLFRPQIP 121 Query 117 GLAEFGFDVDTYDGAVRLQQHLQGLAGGPLTSAAATVVVVGAGLTGIETACELPGRLHAL 176 GL + F+VD A L HL LA P + A TVV+ GAG TGIETA E+P RL + Sbjct 122 GLEQHSFNVDQVADAAALDAHLASLARRPESVARNTVVIAGAGFTGIETAAEMPARLREV 181 Query 177 FARGDGVTPRVVLIDHNPFVGSDMGLSARPVIEQALLDNGVETRTGVSVAAVSPGGVTLS 236 F + V V++++ N VG D+G RPVI +AL + GV + G VAAV GVTL Sbjct 182 FGKDAAVN--VIMVERNSDVGPDLGPGPRPVITEALTELGVTWKLGSGVAAVDANGVTLE 239 Query 237 SGERLAAATVVWCAGMRASRLTEQLPVARDRLGRLQVDDYLRVIGVPAMFAAGDVAAARM 296 +G+R+ TV+W AG RAS LT Q+P RD GRL VD L+V G+ ++A GDVA A Sbjct 240 NGQRIETDTVIWTAGARASALTSQIPAQRDNFGRLHVDRNLKVKGIDTVYATGDVAYAST 299 Query 297 DDE-HLSVMSCQHGRPMGRYAGCNVINDLFDQPLLALRIPWYVTVLDLGSAGAVYTEGWE 355 D+E + + MSCQH +GR AG NV DL + P YVT LDLGS GAVYTEGW+ Sbjct 300 DEEGNHAAMSCQHAMKLGRIAGHNVAADLLGATPIPYSQPKYVTCLDLGSWGAVYTEGWD 359 Query 356 RKVVSQGAPAKTTKQSINTRRIYPPLNGSRADLLAAAAP 394 R+V GA AK K INT IYPP + RA+ LA A P Sbjct 360 RQVKLVGAEAKALKTQINTEWIYPP-SADRAEALAWADP 397 >gi|213157475|ref|YP_002319520.1| NADH dehydrogenase fad-containing subunit [Acinetobacter baumannii AB0057] gi|215483318|ref|YP_002325529.1| Pyridine nucleotide-disulphide oxidoreductase family protein [Acinetobacter baumannii AB307-0294] gi|301345359|ref|ZP_07226100.1| Pyridine nucleotide-disulphide oxidoreductase family protein [Acinetobacter baumannii AB056] 8 more sequence titles Length=401 Score = 298 bits (762), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 175/397 (45%), Positives = 229/397 (58%), Gaps = 10/397 (2%) Query 3 RVVVIGSGFAGLWAALGAARRLDELAVLAGTVDVMVVSNKPFHDIRVRNYEADLSACRIP 62 R+++ GSGFAGLWAAL AA+R LA ++VM++S P IR R YEA L Sbjct 4 RIIIAGSGFAGLWAAL-AAQRAIHLASQEQNIEVMMISPSPNVGIRPRLYEAVLENMNPD 62 Query 63 LGDVLGPAGVAHVTAEVTAIDADGRRVTTST----GASYSYDRLVLASGSHVVKPALPGL 118 + ++L V + V I+AD + + ST + SYDR +LA+GS P +PGL Sbjct 63 ISELLTVVDVKFLAGWVDKINADQQTIEVSTTDGSKQTLSYDRFILATGSTTFMPPIPGL 122 Query 119 AEFGFDVDTYDGAVRLQQHLQGLAGGPLTSAAATVVVVGAGLTGIETACELPGRLHALFA 178 E+GF V T + A +L QHL+ LA P +A TVVV G GLTG+ET E+P RL + Sbjct 123 TEYGFSVSTLEDAEKLDQHLKNLANKPANAARNTVVVAGGGLTGLETVTEMPERLRNILG 182 Query 179 RGDGVTPRVVLIDHNPFVGSDMGLSARPVIEQALLDNGVETRTGVSVAAVSPGGVTLSSG 238 D RVVL+D + +G+ MG A VI +AL + GVE + G+ V A+ GVTLS+G Sbjct 183 ETDA---RVVLVDSSIDIGAAMGDQAATVIREALNELGVEGKAGLRVTALDATGVTLSNG 239 Query 239 ERLAAATVVWCAGMRASRLTEQLPVARDRLGRLQVDDYLRVIGVPAMFAAGDVAAARMDD 298 E++ TV+W AGMRA+ LT Q+ +D LGRL D YL V +F GD DD Sbjct 240 EKIETETVIWTAGMRANPLTSQIAGEKDNLGRLMGDAYLHVPEAKNIFVTGDTVKVPTDD 299 Query 299 -EHLSVMSCQHGRPMGRYAGCNVINDLFDQPLLALRIPWYVTVLDLGSAGAVYTEGWERK 357 + +VMSCQH +GR AG N +L D PL P YVT +DLG GA+YTEGW+R+ Sbjct 300 LGNFNVMSCQHAMSLGRVAGYNAAAELVDLPLHPYSQPKYVTCVDLGPWGALYTEGWDRQ 359 Query 358 VVSQGAPAKTTKQSINTRRIYPPLNGSRADLLAAAAP 394 V AK KQ INT IYPP+ R + A A P Sbjct 360 VQFVREEAKKIKQEINTVWIYPPI-ADREAVFAIANP 395 >gi|169795833|ref|YP_001713626.1| oxidoreductase; metal-binding oxidoreductase [Acinetobacter baumannii AYE] gi|169148760|emb|CAM86626.1| putative oxidoreductase; putative Metal-binding Oxidoreductase [Acinetobacter baumannii AYE] Length=401 Score = 298 bits (762), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 175/397 (45%), Positives = 229/397 (58%), Gaps = 10/397 (2%) Query 3 RVVVIGSGFAGLWAALGAARRLDELAVLAGTVDVMVVSNKPFHDIRVRNYEADLSACRIP 62 R+++ GSGFAGLWAAL AA+R LA ++VM++S P IR R YEA L Sbjct 4 RIIIAGSGFAGLWAAL-AAQRAIHLASQEQNIEVMMISPSPNVGIRPRLYEAVLENMNPD 62 Query 63 LGDVLGPAGVAHVTAEVTAIDADGRRVTTST----GASYSYDRLVLASGSHVVKPALPGL 118 + ++L V + V I+AD + + ST + SYDR +LA+GS P +PGL Sbjct 63 ISELLTVVDVKFLAGWVDTINADQQTIEVSTTDGSKQTLSYDRFILATGSTTFMPPIPGL 122 Query 119 AEFGFDVDTYDGAVRLQQHLQGLAGGPLTSAAATVVVVGAGLTGIETACELPGRLHALFA 178 E+GF V T + A +L QHL+ LA P +A TVVV G GLTG+ET E+P RL + Sbjct 123 TEYGFSVSTLEDAEKLDQHLKNLANKPANAARNTVVVAGGGLTGLETVTEMPERLRNILG 182 Query 179 RGDGVTPRVVLIDHNPFVGSDMGLSARPVIEQALLDNGVETRTGVSVAAVSPGGVTLSSG 238 D RVVL+D + +G+ MG A VI +AL + GVE + G+ V A+ GVTLS+G Sbjct 183 ETDA---RVVLVDSSIDIGAAMGDQAATVIREALNELGVEGKAGLRVTALDATGVTLSNG 239 Query 239 ERLAAATVVWCAGMRASRLTEQLPVARDRLGRLQVDDYLRVIGVPAMFAAGDVAAARMDD 298 E++ TV+W AGMRA+ LT Q+ +D LGRL D YL V +F GD DD Sbjct 240 EKIETETVIWTAGMRANPLTSQIAGEKDNLGRLMGDAYLHVPEAKNIFVTGDTVKVPTDD 299 Query 299 -EHLSVMSCQHGRPMGRYAGCNVINDLFDQPLLALRIPWYVTVLDLGSAGAVYTEGWERK 357 + +VMSCQH +GR AG N +L D PL P YVT +DLG GA+YTEGW+R+ Sbjct 300 LGNFNVMSCQHAMSLGRVAGYNAAAELVDLPLHPYSQPKYVTCVDLGPWGALYTEGWDRQ 359 Query 358 VVSQGAPAKTTKQSINTRRIYPPLNGSRADLLAAAAP 394 V AK KQ INT IYPP+ R + A A P Sbjct 360 VQFVREEAKKIKQEINTVWIYPPI-ADREAVFAIANP 395 >gi|299770002|ref|YP_003732028.1| NADH dehydrogenase, FAD-containing subunit [Acinetobacter sp. DR1] gi|298700090|gb|ADI90655.1| NADH dehydrogenase, FAD-containing subunit [Acinetobacter sp. DR1] Length=401 Score = 297 bits (761), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 175/397 (45%), Positives = 229/397 (58%), Gaps = 10/397 (2%) Query 3 RVVVIGSGFAGLWAALGAARRLDELAVLAGTVDVMVVSNKPFHDIRVRNYEADLSACRIP 62 R+++ GSGFAGLWAAL AA+R LA ++V++VS P DIR R YEA L Sbjct 4 RIIIAGSGFAGLWAAL-AAQRAIYLASQEQNIEVVMVSPSPNVDIRPRLYEAVLENMNPD 62 Query 63 LGDVLGPAGVAHVTAEVTAIDADGRRVTTST----GASYSYDRLVLASGSHVVKPALPGL 118 + D+L GV + V ID D + + ST + SYDR +LA+GS P +PGL Sbjct 63 ISDLLSVVGVKFLAGWVNKIDVDQQAIEVSTTDGSKQTLSYDRFILATGSTTFMPPIPGL 122 Query 119 AEFGFDVDTYDGAVRLQQHLQGLAGGPLTSAAATVVVVGAGLTGIETACELPGRLHALFA 178 E+GF V T + A +L QHL+ LA P +A TVVV G GLTG+ET E+P RL ++ Sbjct 123 TEYGFSVSTLEDAEKLDQHLKNLAHKPANAARNTVVVAGGGLTGLETVTEMPERLRSILG 182 Query 179 RGDGVTPRVVLIDHNPFVGSDMGLSARPVIEQALLDNGVETRTGVSVAAVSPGGVTLSSG 238 D RVVL+D + +G+ MG A VI +AL + GVE + G+ V A+ GVTLS+G Sbjct 183 ETD---IRVVLVDSSTEIGAAMGDQAATVIREALSELGVEGKAGLRVTALDASGVTLSNG 239 Query 239 ERLAAATVVWCAGMRASRLTEQLPVARDRLGRLQVDDYLRVIGVPAMFAAGDVAAARMDD 298 E++ TV+W AGMRA+ LT Q+ +D LGR+ D YL +F GD DD Sbjct 240 EKIETQTVIWTAGMRANSLTSQVTGEKDNLGRILGDAYLHAPEAKNIFVTGDTVKVPTDD 299 Query 299 -EHLSVMSCQHGRPMGRYAGCNVINDLFDQPLLALRIPWYVTVLDLGSAGAVYTEGWERK 357 + +VMSCQH +GR AG N +L D PL P YVT +DLG GA+Y+EGW+R+ Sbjct 300 LGNFNVMSCQHAMSLGRVAGYNAAAELVDLPLHPYSQPKYVTCVDLGPWGALYSEGWDRQ 359 Query 358 VVSQGAPAKTTKQSINTRRIYPPLNGSRADLLAAAAP 394 V AK KQ INT IYPP R + A A P Sbjct 360 VQFVRDEAKKIKQEINTIWIYPPA-ADREAVFAIANP 395 >gi|187921327|ref|YP_001890359.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase [Burkholderia phytofirmans PsJN] gi|187719765|gb|ACD20988.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase [Burkholderia phytofirmans PsJN] Length=402 Score = 297 bits (760), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 173/397 (44%), Positives = 235/397 (60%), Gaps = 8/397 (2%) Query 3 RVVVIGSGFAGLWAALGAARRLDELAVLAGTVDVMVVSNKPFHDIRVRNYEADLSACRIP 62 +++++G+GFAG+W ALGAAR LD A +D+ ++S KP IR R YE++ P Sbjct 4 KILIVGAGFAGVWGALGAARVLDRAGATARDIDITLISPKPELQIRPRMYESEPHLMFAP 63 Query 63 LGDVLGPAGVAHVTAEVTAIDADGR--RVTTSTGAS--YSYDRLVLASGSHVVKPALPGL 118 L +LG GV +V V I + R+T ++G + SYDRL+L SGS + +P++PGL Sbjct 64 LLPLLGAVGVNYVEGSVDEIAVRDKTVRMTAASGETRTLSYDRLLLTSGSELSRPSIPGL 123 Query 119 AEFGFDVDTYDGAVRLQQHLQGLAGGPLTSAAATVVVVGAGLTGIETACELPGRLHALFA 178 E+ F VD + A L++HL+ LA +SA TV VVG G TGIE A ELP R+ A+F Sbjct 124 TEYAFSVDCMEDASALEEHLEELAKLQDSSARNTVAVVGCGFTGIEIATELPKRMRAIF- 182 Query 179 RGDGVTPRVVLIDHNPFVGSDMGLSARPVIEQALLDNGVETRTGVSVAAVSPGGVTLSSG 238 G +V+++ +G D+G + RP + +A G+E G SV +V GV +SG Sbjct 183 -GPDAAIKVIVVGSQADIGPDLGPNPRPFVAEAFGSLGIEAVLGSSVVSVDASGVRTASG 241 Query 239 ERLAAATVVWCAGMRASRLTEQLPVARDRLGRLQVDDYLRVIGVPAMFAAGDVAAARMDD 298 + A TVVW GMRAS L Q+ D LGR++V LRV P +F AGDVA R DD Sbjct 242 AHIEAHTVVWAGGMRASTLAAQVSSRLDPLGRVEVAPDLRVEEAPGVFVAGDVARVRSDD 301 Query 299 E-HLSVMSCQHGRPMGRYAGCNVINDLFDQPLLALRIPWYVTVLDLGSAGAVYTEGWERK 357 E H ++MSCQH MG++ G NV DL LA P+Y T LDLG GA+Y+EGW+R+ Sbjct 302 EGHYALMSCQHAMVMGKFGGHNVAADLLGASTLAYSQPFYATCLDLGEWGAIYSEGWDRQ 361 Query 358 VVSQGAPAKTTKQSINTRRIYPPLNGSRADLLAAAAP 394 + A K KQ INT+ IYPP + AD LAA P Sbjct 362 IKLTHAEGKARKQMINTQWIYPPAP-NHADALAAGDP 397 >gi|336037346|gb|AEH83276.1| putative dehydrogenase, oxidoreductase FAD flavoprotein [Sinorhizobium meliloti SM11] Length=401 Score = 297 bits (760), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 179/398 (45%), Positives = 234/398 (59%), Gaps = 8/398 (2%) Query 3 RVVVIGSGFAGLWAALGAARRLDELAVLAGTVDVMVVSNKPFHDIRVRNYEADLSACRIP 62 R+V++G+GFAG++AAL AAR D V +++ +VS +P IR R YE + P Sbjct 2 RLVIVGAGFAGMYAALSAARLRDIEGVSPEELEIALVSPEPTLVIRPRLYEPNPETLTAP 61 Query 63 LGDVLGPAGVAHVTAEVTAIDADGRRVTTSTG----ASYSYDRLVLASGSHVVKPALPGL 118 L +V +A+V V AID V + Y RLVLA+GS + +P +PGL Sbjct 62 LQNVFDAVDIAYVQGSVDAIDTKACTVEVVNAEGERKTLQYHRLVLATGSRLFRPNIPGL 121 Query 119 AEFGFDVDTYDGAVRLQQHLQGLAGGPLTSAAATVVVVGAGLTGIETACELPGRLHALFA 178 AE+ F +D D A+ L +HL LA P ++A T+VV GAG TGIE A E+P RL LF Sbjct 122 AEYAFSIDNVDDAIALDRHLHELAKMPASAARDTIVVAGAGFTGIEAATEMPSRLRTLFD 181 Query 179 RGDGVTPRVVLIDHNPFVGSDMGLSARPVIEQALLDNGVETRTGVSVAAVSPGGVTLSSG 238 + PRV++ID + V DMG ARP+IE AL GVETR V+++ GVTLS+G Sbjct 182 KT--ANPRVIIIDRSSAVAPDMGEGARPIIEDALRRLGVETRLNAGVSSLDKSGVTLSTG 239 Query 239 ERLAAATVVWCAGMRASRLTEQLPVARDRLGRLQVDDYLRVIGVPAMFAAGDVAAARMDD 298 E + TV+W AGMRA+ +T ++P RD+ RL VD LRV VP +FA GD A A DD Sbjct 240 EHIETMTVIWAAGMRANPVTTKIPGERDKFDRLLVDGCLRVPSVPGVFATGDAARAACDD 299 Query 299 -EHLSVMSCQHGRPMGRYAGCNVINDLFDQPLLALRIPWYVTVLDLGSAGAVYTEGWERK 357 + ++MSCQH MG +AG N +L P YVT LDLG AGA++T GW+R+ Sbjct 300 CGNYALMSCQHATRMGAFAGNNAAAELLGVPPRQYHQKAYVTCLDLGDAGALFTRGWDRE 359 Query 358 VVSQGAPAKTTKQSINTRRIYPPLNGSRADLLAAAAPR 395 V G AK TKQ INT IYPP RA LA+A P Sbjct 360 VEMVGEKAKATKQEINTVWIYPP-EPERAAALASADPE 396 >gi|334320483|ref|YP_004557112.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase [Sinorhizobium meliloti AK83] gi|334098222|gb|AEG56232.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase [Sinorhizobium meliloti AK83] Length=401 Score = 296 bits (759), Expect = 3e-78, Method: Compositional matrix adjust. Identities = 179/398 (45%), Positives = 234/398 (59%), Gaps = 8/398 (2%) Query 3 RVVVIGSGFAGLWAALGAARRLDELAVLAGTVDVMVVSNKPFHDIRVRNYEADLSACRIP 62 R+V++G+GFAG++AAL AAR D V +++ +VS +P IR R YE + P Sbjct 2 RLVIVGAGFAGVYAALSAARLRDIEGVSPEELEIALVSPEPTLVIRPRLYEPNPETLTAP 61 Query 63 LGDVLGPAGVAHVTAEVTAIDADGRRVTTSTG----ASYSYDRLVLASGSHVVKPALPGL 118 L +V +A+V V AID V + Y RLVLA+GS + +P +PGL Sbjct 62 LQNVFDAVDIAYVQGSVDAIDTKACTVEVVNAEGERKTLQYHRLVLATGSRLFRPNIPGL 121 Query 119 AEFGFDVDTYDGAVRLQQHLQGLAGGPLTSAAATVVVVGAGLTGIETACELPGRLHALFA 178 AE+ F +D D A+ L +HL LA P ++A T+VV GAG TGIE A E+P RL LF Sbjct 122 AEYAFSIDNVDDAIALDRHLHELAKMPASAARDTIVVAGAGFTGIEAATEMPSRLRTLFD 181 Query 179 RGDGVTPRVVLIDHNPFVGSDMGLSARPVIEQALLDNGVETRTGVSVAAVSPGGVTLSSG 238 + PRV++ID + V DMG ARP+IE AL GVETR V+++ GVTLS+G Sbjct 182 KT--ANPRVIIIDRSSAVAPDMGEGARPIIEDALRRLGVETRLNAGVSSLDKSGVTLSTG 239 Query 239 ERLAAATVVWCAGMRASRLTEQLPVARDRLGRLQVDDYLRVIGVPAMFAAGDVAAARMDD 298 E + TV+W AGMRA+ +T ++P RD+ RL VD LRV VP +FA GD A A DD Sbjct 240 EHIETMTVIWAAGMRANPVTTKIPGERDKFDRLLVDGCLRVPSVPGVFATGDAARAACDD 299 Query 299 -EHLSVMSCQHGRPMGRYAGCNVINDLFDQPLLALRIPWYVTVLDLGSAGAVYTEGWERK 357 + ++MSCQH MG +AG N +L P YVT LDLG AGA++T GW+R+ Sbjct 300 CGNYALMSCQHATRMGAFAGNNAAAELLGVPPRQYHQKAYVTCLDLGDAGALFTRGWDRE 359 Query 358 VVSQGAPAKTTKQSINTRRIYPPLNGSRADLLAAAAPR 395 V G AK TKQ INT IYPP RA LA+A P Sbjct 360 VEMVGEKAKATKQEINTVWIYPP-EPERAAALASADPE 396 >gi|170721555|ref|YP_001749243.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase [Pseudomonas putida W619] gi|169759558|gb|ACA72874.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase [Pseudomonas putida W619] Length=401 Score = 296 bits (759), Expect = 4e-78, Method: Compositional matrix adjust. Identities = 182/405 (45%), Positives = 237/405 (59%), Gaps = 16/405 (3%) Query 1 LTRVVVIGSGFAGLWAALGAARRLDELAVLAGTVDVMV--VSNKPFHDIRVRNYEADLSA 58 + +++IG+GFAGLW+AL A R+LD L G D+ V ++ +P +R R YE D+ Sbjct 1 MKNILIIGAGFAGLWSALSAVRQLD----LHGRTDIEVTLLAPQPELHVRPRFYEPDVHT 56 Query 59 CRIPLGDVLGPAGVAHVTAEVTAIDADGRRVT----TSTGASYSYDRLVLASGSHVVKPA 114 PL + V V ID G+RV+ + T S YDRL++A GS + +P Sbjct 57 MAAPLQALFEAVSVRFVQGTAFHIDEAGKRVSYRTQSGTECSLPYDRLIMACGSVLNRPD 116 Query 115 LPGLAEFGFDVDTYDGAVRLQQHLQGLAGGPLTSAAATVVVVGAGLTGIETACELPGRLH 174 + G+ E FDVD D A RL+ HL+ LA P T A TVVV G G TGIETA ELP RL Sbjct 117 MVGI-EHVFDVDKIDSAARLEAHLKSLANLPDTPARNTVVVAGGGFTGIETATELPSRLR 175 Query 175 ALFARGDGVTPRVVLIDHNPFVGSDMGLSARPVIEQALLDNGVETRTGVSVAAVSPGGVT 234 + G+ RVV++D +G+ +G RP IEQA G+E +VAAV P GV Sbjct 176 KIL--GEQARLRVVVVDRGVKIGAALGEGIRPSIEQACASLGIEWICAATVAAVDPEGVL 233 Query 235 LSSGERLAAATVVWCAGMRASRLTEQLPVARDRLGRLQVDDYLRVIGVPAMFAAGDVAAA 294 L +G+R+ A+TV+W G +A+ LTEQ+ RDR GRL VD L+V G A++AAGDVA A Sbjct 234 LDNGQRIEASTVIWTVGFKANPLTEQISGDRDRQGRLHVDGNLKVKGNDAVYAAGDVAYA 293 Query 295 RMDDE-HLSVMSCQHGRPMGRYAGCNVINDLFDQPLLALRIPWYVTVLDLGSAGAVYTEG 353 DD + +VMSCQH P+GRYAG N + +L + P YVT LDLG+ GAVYTEG Sbjct 294 ACDDAGNYAVMSCQHAIPLGRYAGNNAVAELIGVAPMPYSQPKYVTCLDLGAWGAVYTEG 353 Query 354 WERKVV--SQGAPAKTTKQSINTRRIYPPLNGSRADLLAAAAPRV 396 WER V + A AK K IN+ IYPP R LAAA P + Sbjct 354 WERTVSPPTDKAEAKVLKSQINSIWIYPPAAEDRQAALAAADPTI 398 >gi|333815164|gb|AEG07831.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase [Sinorhizobium meliloti BL225C] Length=401 Score = 296 bits (758), Expect = 4e-78, Method: Compositional matrix adjust. Identities = 182/404 (46%), Positives = 236/404 (59%), Gaps = 20/404 (4%) Query 3 RVVVIGSGFAGLWAALGAARRLDELAVLAGTVDVMVVSNKPFHDIRVRNYEADLSACRIP 62 R+V++G+GFAG++AAL AAR D V +++ +VS +P IR R YE P Sbjct 2 RLVIVGAGFAGMYAALSAARLRDIEGVSPEELEIALVSPEPTLVIRPRLYEPSPETLTAP 61 Query 63 LGDVLGPAGVAHVTAEVTAID----------ADGRRVTTSTGASYSYDRLVLASGSHVVK 112 L +V VA+V V A+D A+G R T Y RLVLA+GS + + Sbjct 62 LQNVFDAVDVAYVQGSVEAVDTKAGTVEVVNAEGERKT------LQYHRLVLATGSRLFR 115 Query 113 PALPGLAEFGFDVDTYDGAVRLQQHLQGLAGGPLTSAAATVVVVGAGLTGIETACELPGR 172 P +PGLAE+ F +D D A+ L +HL LA P ++A T+VV GAG TGIE A E+P R Sbjct 116 PNIPGLAEYAFSIDNVDDAIALDRHLHELAKMPASAARDTIVVAGAGFTGIEAATEMPSR 175 Query 173 LHALFARGDGVTPRVVLIDHNPFVGSDMGLSARPVIEQALLDNGVETRTGVSVAAVSPGG 232 L LF + PRV++ID + V DMG ARP+IE AL GVETR V+++ G Sbjct 176 LRTLFDKT--ANPRVIIIDRSSAVAPDMGEGARPIIEDALRRLGVETRLNAGVSSLDKSG 233 Query 233 VTLSSGERLAAATVVWCAGMRASRLTEQLPVARDRLGRLQVDDYLRVIGVPAMFAAGDVA 292 VTLS+GE + TV+W AGMRA+ +T ++P RD+ RL VD LRV VP +FA GD A Sbjct 234 VTLSTGEHIETMTVIWAAGMRANPVTTKIPGERDKFDRLLVDGCLRVPSVPGVFATGDAA 293 Query 293 AARMDD-EHLSVMSCQHGRPMGRYAGCNVINDLFDQPLLALRIPWYVTVLDLGSAGAVYT 351 A DD + ++MSCQH MG +AG N +L P YVT LDLG AGA++T Sbjct 294 RAACDDCGNYALMSCQHATRMGAFAGNNAAAELLGVPPRQYHQKAYVTCLDLGDAGALFT 353 Query 352 EGWERKVVSQGAPAKTTKQSINTRRIYPPLNGSRADLLAAAAPR 395 GW+R+V G AK TKQ INT IYPP RA LA+A P Sbjct 354 RGWDREVEMVGEKAKATKQEINTVWIYPP-KPERAAALASADPE 396 >gi|121594468|ref|YP_986364.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase [Acidovorax sp. JS42] gi|120606548|gb|ABM42288.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase [Acidovorax sp. JS42] gi|313498420|gb|ADR59786.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase [Pseudomonas putida BIRD-1] Length=400 Score = 295 bits (756), Expect = 7e-78, Method: Compositional matrix adjust. Identities = 171/385 (45%), Positives = 232/385 (61%), Gaps = 11/385 (2%) Query 2 TRVVVIGSGFAGLWAALGAARRLDELAVLAGTVDVMVVSNKPFHDIRVRNYEADLSACRI 61 + +++IG+GFAG+W+AL AAR LD+ + + V++ +P IR R YEAD+ + Sbjct 3 SNILIIGAGFAGVWSALSAARLLDQ--AQRADLSISVLAPQPELRIRPRFYEADVHGMKA 60 Query 62 PLGDVLGPAGVAHVTAEVTAIDADGRRV----TTSTGASYSYDRLVLASGSHVVKPALPG 117 PLGD+ G+ +ID +GR V T +YDRL+LA+GS V +PA+PG Sbjct 61 PLGDLFEAVGIHFFPGNADSIDTEGRSVSYTDTHGQPQRIAYDRLILAAGSQVARPAVPG 120 Query 118 LAEFGFDVDTYDGAVRLQQHLQGLAGGPLTSAAATVVVVGAGLTGIETACELPGRLHALF 177 LAE FDVD + A+RL+QHL LA P + TVVV G G TGIETA E+P RL ++ Sbjct 121 LAEHAFDVDQMESAMRLEQHLVDLAALPASPTRNTVVVCGGGFTGIETATEMPTRLRSIL 180 Query 178 ARGDGVTPRVVLIDHNPFVGSDMGLSARPVIEQALLDNGVETRTGVSVAAVSPGGVTLSS 237 G RVV++D VG+ +G P I A GVE G SV AV GVTL + Sbjct 181 --GADAALRVVVVDRGAQVGAALGEGITPSIVAACEQAGVEWLAGASVVAVDAAGVTLDN 238 Query 238 GERLAAATVVWCAGMRASRLTEQLPVARDRLGRLQVDDYLRVIGVPAMFAAGDVAAARMD 297 GE +A+ TV+W G++AS LT + RD GRL+VD +L+V+G ++A GD A A +D Sbjct 239 GEHIASNTVIWTVGVKASPLTAHVAGERDTFGRLKVDGHLKVLGQEHVYATGDTAWAAVD 298 Query 298 D-EHLSVMSCQHGRPMGRYAGCNVINDLFD-QPLLALRIPWYVTVLDLGSAGAVYTEGWE 355 D + ++M+CQH PMGR+AG N DL QP+L R P YVT LDLG GA ++EGWE Sbjct 299 DLGNHALMTCQHAIPMGRHAGNNAAADLLGLQPVL-YRQPKYVTCLDLGDWGAAFSEGWE 357 Query 356 RKVVSQGAPAKTTKQSINTRRIYPP 380 R++ G K K+ IN+ IYPP Sbjct 358 RELKLHGQEGKALKRQINSVWIYPP 382 >gi|239834832|ref|ZP_04683160.1| NADH oxidase [Ochrobactrum intermedium LMG 3301] gi|239822895|gb|EEQ94464.1| NADH oxidase [Ochrobactrum intermedium LMG 3301] Length=403 Score = 295 bits (755), Expect = 9e-78, Method: Compositional matrix adjust. Identities = 170/383 (45%), Positives = 218/383 (57%), Gaps = 7/383 (1%) Query 3 RVVVIGSGFAGLWAALGAARRLDELAVLAGTVDVMVVSNKPFHDIRVRNYEADLSACRIP 62 ++++G+GFAG+ AAL A+R E V A ++ + VVS P IR R YE P Sbjct 4 HILIVGAGFAGVMAALAASRLRHEKGVSAESLKISVVSPDPELVIRPRLYEPHPEKMTAP 63 Query 63 LGDVLGPAGVAHVTAEVTAIDADGRRVTT----STGASYSYDRLVLASGSHVVKPALPGL 118 LG++ + V A V IDA RVT +S YDRLVLASGS +P +PGL Sbjct 64 LGELFEATEIEFVPATVERIDAANNRVTVLDDRGQSSSLPYDRLVLASGSRGFQPPIPGL 123 Query 119 AEFGFDVDTYDGAVRLQQHLQGLAGGPLTSAAATVVVVGAGLTGIETACELPGRLHALFA 178 +E+GF + + A+ L QHL LA P + A T+VV GAG TG+E A EL RL + Sbjct 124 SEYGFASNHLEEAIILDQHLHSLAAQPASPARDTLVVGGAGFTGLEVATELKARLQTIL- 182 Query 179 RGDGVTPRVVLIDHNPFVGSDMGLSARPVIEQALLDNGVETRTGVSVAAVSPGGVTLSSG 238 G PR++++D NP V MG RP IE L G+ETR +A + VTL SG Sbjct 183 -GPTAQPRIIIVDRNPHVAPAMGEHPRPYIESRLEGLGIETRLNTGIAQLDSSSVTLDSG 241 Query 239 ERLAAATVVWCAGMRASRLTEQLPVARDRLGRLQVDDYLRVIGVPAMFAAGDVAAARMDD 298 ER+ +TV+W GMRAS LT QL +D LGR+ VD LRV G +FA GD A A DD Sbjct 242 ERIETSTVIWSGGMRASSLTSQLDADKDSLGRIIVDPDLRVPGYSYIFATGDTAKAATDD 301 Query 299 E-HLSVMSCQHGRPMGRYAGCNVINDLFDQPLLALRIPWYVTVLDLGSAGAVYTEGWERK 357 + + S+MSCQH R +G +AG N +L + L P YV LDLG A++T GW+ K Sbjct 302 KGNFSLMSCQHARRLGAFAGHNAAAELLGEATLKYDQPAYVVCLDLGPDAAIFTRGWDGK 361 Query 358 VVSQGAPAKTTKQSINTRRIYPP 380 V GA AK KQ INT IYPP Sbjct 362 VELTGAEAKKVKQEINTVWIYPP 384 >gi|184158244|ref|YP_001846583.1| NADH dehydrogenase, FAD-containing subunit [Acinetobacter baumannii ACICU] gi|183209838|gb|ACC57236.1| NADH dehydrogenase, FAD-containing subunit [Acinetobacter baumannii ACICU] gi|322508567|gb|ADX04021.1| NADH dehydrogenase FAD-containing subunit [Acinetobacter baumannii 1656-2] gi|323518181|gb|ADX92562.1| NADH dehydrogenase, FAD-containing subunit [Acinetobacter baumannii TCDC-AB0715] gi|333364416|gb|EGK46430.1| NADH dehydrogenase, FAD-containing subunit [Acinetobacter baumannii AB210] gi|342224937|gb|EGT89948.1| NADH dehydrogenase, FAD-containing subunit [Acinetobacter baumannii ABNIH1] gi|342233440|gb|EGT98170.1| NADH dehydrogenase, FAD-containing subunit [Acinetobacter baumannii ABNIH3] gi|342234534|gb|EGT99185.1| NADH dehydrogenase, FAD-containing subunit [Acinetobacter baumannii ABNIH4] Length=401 Score = 295 bits (755), Expect = 9e-78, Method: Compositional matrix adjust. Identities = 175/397 (45%), Positives = 230/397 (58%), Gaps = 10/397 (2%) Query 3 RVVVIGSGFAGLWAALGAARRLDELAVLAGTVDVMVVSNKPFHDIRVRNYEADLSACRIP 62 R+++ GSGFAGLWAAL AA+R LA ++VM+VS P IR R YEA L Sbjct 4 RIIIAGSGFAGLWAAL-AAQRAIHLASQEQNIEVMMVSPSPNVGIRPRLYEAVLENMNPD 62 Query 63 LGDVLGPAGVAHVTAEVTAIDADGRRVTTST----GASYSYDRLVLASGSHVVKPALPGL 118 + ++L GV + V ID + + + +T + SYDR VLA+GS P +PGL Sbjct 63 ISELLSVVGVKFLAGWVNKIDVNQQTIEVATTDGNKQNLSYDRFVLATGSTTFMPPIPGL 122 Query 119 AEFGFDVDTYDGAVRLQQHLQGLAGGPLTSAAATVVVVGAGLTGIETACELPGRLHALFA 178 E+GF V+T + A +L QHL+ LA P +A TVVV G GLTG+ET E+P RL ++ Sbjct 123 KEYGFSVNTLEDAEKLDQHLKNLAHKPANAARNTVVVAGGGLTGLETVTEMPERLRSILG 182 Query 179 RGDGVTPRVVLIDHNPFVGSDMGLSARPVIEQALLDNGVETRTGVSVAAVSPGGVTLSSG 238 D RVVL+D + +G+ MG A VI +AL + GVE + G+ V A+ GVTLS+G Sbjct 183 ETD---VRVVLVDSSTDIGAAMGDQAATVIREALNELGVEGKAGLRVTALDATGVTLSNG 239 Query 239 ERLAAATVVWCAGMRASRLTEQLPVARDRLGRLQVDDYLRVIGVPAMFAAGDVAAARMDD 298 E++ TV+W AGMRA+ LT Q+ +D LGRL D YL +F GD DD Sbjct 240 EKIETETVIWTAGMRANPLTSQIAGEKDNLGRLIGDAYLHAPEAKNIFVTGDTVKVPTDD 299 Query 299 -EHLSVMSCQHGRPMGRYAGCNVINDLFDQPLLALRIPWYVTVLDLGSAGAVYTEGWERK 357 + +VMSCQH +GR AG N +L D PL P YVT +DLG GA+YTEGW+R+ Sbjct 300 LGNFNVMSCQHAMSLGRVAGYNAAAELVDLPLHPYSQPKYVTCVDLGPWGALYTEGWDRQ 359 Query 358 VVSQGAPAKTTKQSINTRRIYPPLNGSRADLLAAAAP 394 V AK KQ INT IYPP+ A + A A P Sbjct 360 VQFVREEAKKIKQEINTVWIYPPVADHEA-VFAIANP 395 >gi|193077440|gb|ABO12253.2| NADH dehydrogenase FAD-containing subunit [Acinetobacter baumannii ATCC 17978] Length=401 Score = 295 bits (755), Expect = 9e-78, Method: Compositional matrix adjust. Identities = 176/397 (45%), Positives = 231/397 (59%), Gaps = 10/397 (2%) Query 3 RVVVIGSGFAGLWAALGAARRLDELAVLAGTVDVMVVSNKPFHDIRVRNYEADLSACRIP 62 R+++ GSGFAGLWAAL AA+R LA ++VM+VS P IR R YEA L Sbjct 4 RIIIAGSGFAGLWAAL-AAQRAIHLASQEQNIEVMMVSPSPNVGIRPRLYEAVLENMNPD 62 Query 63 LGDVLGPAGVAHVTAEVTAIDADGR--RVTTSTG--ASYSYDRLVLASGSHVVKPALPGL 118 + ++L GV + V ID++ + +V T+ G + SYDR VLA+GS P +PGL Sbjct 63 ISELLSVVGVKFLAGWVNKIDSNQQTIKVATTDGNKQNLSYDRFVLATGSTTFMPPIPGL 122 Query 119 AEFGFDVDTYDGAVRLQQHLQGLAGGPLTSAAATVVVVGAGLTGIETACELPGRLHALFA 178 E+GF V+T + A +L QHL+ L P A TVVV G GLTG+ET E+P RL ++ Sbjct 123 KEYGFSVNTLEDAEKLDQHLKNLVNEPANVARNTVVVAGGGLTGLETVTEMPERLRSILG 182 Query 179 RGDGVTPRVVLIDHNPFVGSDMGLSARPVIEQALLDNGVETRTGVSVAAVSPGGVTLSSG 238 D RVVL+D + +G+ MG A VI +AL + GVE + G+ V A+ GVTLS+G Sbjct 183 ETD---VRVVLVDSSTDIGAAMGDQAATVIREALNELGVEGKAGLRVTALDATGVTLSNG 239 Query 239 ERLAAATVVWCAGMRASRLTEQLPVARDRLGRLQVDDYLRVIGVPAMFAAGDVAAARMDD 298 E++ TV+W AGMRA+ LT Q+ +D LGRL D YL +F GD DD Sbjct 240 EKIETETVIWTAGMRANPLTSQIAGEKDNLGRLIGDAYLHAPEAKNIFVTGDTVKVPTDD 299 Query 299 -EHLSVMSCQHGRPMGRYAGCNVINDLFDQPLLALRIPWYVTVLDLGSAGAVYTEGWERK 357 + +VMSCQH +GR AG N +L D PL P YVT +DLG GA+YTEGW+R+ Sbjct 300 LGNFNVMSCQHAMSLGRVAGYNAAAELVDLPLHPYSQPKYVTCVDLGPWGALYTEGWDRQ 359 Query 358 VVSQGAPAKTTKQSINTRRIYPPLNGSRADLLAAAAP 394 V AK KQ INT IYPP+ R + A A P Sbjct 360 VQFVREEAKKIKQEINTVWIYPPV-ADREAVFAIANP 395 >gi|262279221|ref|ZP_06057006.1| NADH dehydrogenase FAD-containing subunit [Acinetobacter calcoaceticus RUH2202] gi|262259572|gb|EEY78305.1| NADH dehydrogenase FAD-containing subunit [Acinetobacter calcoaceticus RUH2202] Length=401 Score = 294 bits (753), Expect = 1e-77, Method: Compositional matrix adjust. Identities = 173/397 (44%), Positives = 229/397 (58%), Gaps = 10/397 (2%) Query 3 RVVVIGSGFAGLWAALGAARRLDELAVLAGTVDVMVVSNKPFHDIRVRNYEADLSACRIP 62 R+++ GSGFAGLWAAL AA+R LA ++V++VS P IR R YEA L Sbjct 4 RIIIAGSGFAGLWAAL-AAQRAIHLASQEQNIEVVMVSPSPNVGIRPRLYEAVLENMNPD 62 Query 63 LGDVLGPAGVAHVTAEVTAIDADGRRVTTST----GASYSYDRLVLASGSHVVKPALPGL 118 + ++L G+ + V ID D + + ST + SYDR +LA+GS P +PGL Sbjct 63 ISELLSVVGIKFLAGWVNQIDGDQQTIEVSTTDGNKQTLSYDRFILATGSTTFMPPIPGL 122 Query 119 AEFGFDVDTYDGAVRLQQHLQGLAGGPLTSAAATVVVVGAGLTGIETACELPGRLHALFA 178 E+GF V T + A +L Q+L+ LA P +A TVVV G GLTG+ET E+P RL ++ Sbjct 123 TEYGFSVSTLEDAEKLDQNLKNLANKPANAARNTVVVAGGGLTGLETVTEMPERLRSILG 182 Query 179 RGDGVTPRVVLIDHNPFVGSDMGLSARPVIEQALLDNGVETRTGVSVAAVSPGGVTLSSG 238 + RVVL+D + +G+ MG A VI +AL + GVE + G+ V A+ GVTLS+G Sbjct 183 ETN---VRVVLVDSSTEIGAAMGDQAATVIREALTELGVEGKAGLRVTALDASGVTLSNG 239 Query 239 ERLAAATVVWCAGMRASRLTEQLPVARDRLGRLQVDDYLRVIGVPAMFAAGDVAAARMDD 298 ER+ TV+W AGMRA+ LT Q+ +D LGRL D YL +F GD DD Sbjct 240 ERIETETVIWTAGMRANSLTSQIAGEKDNLGRLIGDAYLHAPEAKNVFVTGDTVKVPTDD 299 Query 299 -EHLSVMSCQHGRPMGRYAGCNVINDLFDQPLLALRIPWYVTVLDLGSAGAVYTEGWERK 357 + +VMSCQH +GR AG N +L D PL A P YVT +DLG GA+Y+EGW+R+ Sbjct 300 LGNFNVMSCQHAMSLGRVAGYNAAAELVDLPLHAYSQPKYVTCVDLGPWGALYSEGWDRQ 359 Query 358 VVSQGAPAKTTKQSINTRRIYPPLNGSRADLLAAAAP 394 V AK KQ INT IYPP R + A A P Sbjct 360 VQFVREEAKKIKQEINTVWIYPPA-ADRDAVFAIANP 395 >gi|325122369|gb|ADY81892.1| NADH dehydrogenase [Acinetobacter calcoaceticus PHEA-2] Length=401 Score = 293 bits (751), Expect = 3e-77, Method: Compositional matrix adjust. Identities = 175/397 (45%), Positives = 229/397 (58%), Gaps = 10/397 (2%) Query 3 RVVVIGSGFAGLWAALGAARRLDELAVLAGTVDVMVVSNKPFHDIRVRNYEADLSACRIP 62 R+++ GSGFAGLWAAL AA+R LA ++V++VS P IR R YEA L Sbjct 4 RIIIAGSGFAGLWAAL-AAQRAIHLASQEQNIEVVMVSPSPNVGIRPRLYEAVLENMNPD 62 Query 63 LGDVLGPAGVAHVTAEVTAIDADGRRVTTST----GASYSYDRLVLASGSHVVKPALPGL 118 + ++L GV + V ID D + + ST S SYDR +LA+GS P + GL Sbjct 63 ISELLSVVGVKFLAGWVNKIDVDQQVIEVSTTDGSKQSLSYDRFILATGSTTFMPPISGL 122 Query 119 AEFGFDVDTYDGAVRLQQHLQGLAGGPLTSAAATVVVVGAGLTGIETACELPGRLHALFA 178 E+GF V T + A +L QHL+ LA P +A TVVV G GLTG+ET E+P RL ++ Sbjct 123 TEYGFSVSTLEDAEKLDQHLKKLANKPANAARNTVVVAGGGLTGLETVTEMPERLRSILG 182 Query 179 RGDGVTPRVVLIDHNPFVGSDMGLSARPVIEQALLDNGVETRTGVSVAAVSPGGVTLSSG 238 D RVVL+D + +G+ MG A VI +AL + GVE +TG+ V A+ GVTLS+G Sbjct 183 ATD---VRVVLVDSSTEIGAAMGDQAATVIREALNELGVEGKTGLRVTALDASGVTLSNG 239 Query 239 ERLAAATVVWCAGMRASRLTEQLPVARDRLGRLQVDDYLRVIGVPAMFAAGDVAAARMDD 298 +R+ TV+W AGMRA+ LT Q+ +D LGRL D YL +F GD DD Sbjct 240 KRIETETVIWTAGMRANPLTSQVTGEKDNLGRLIGDAYLHAPEAKNIFVTGDTVKVPTDD 299 Query 299 -EHLSVMSCQHGRPMGRYAGCNVINDLFDQPLLALRIPWYVTVLDLGSAGAVYTEGWERK 357 + +VMSCQH +GR AG N +L D PL P YVT +DLG GA+Y+EGW+R+ Sbjct 300 LGNFNVMSCQHAMSLGRVAGYNAAAELVDLPLHPYSQPKYVTCVDLGPWGALYSEGWDRQ 359 Query 358 VVSQGAPAKTTKQSINTRRIYPPLNGSRADLLAAAAP 394 V AK KQ INT IYPP+ R + A A P Sbjct 360 VQFVREEAKKIKQEINTVWIYPPV-ADREAVFAIANP 395 >gi|16264903|ref|NP_437695.1| dehydrogenase, oxidoreductase FAD flavoprotein [Sinorhizobium meliloti 1021] gi|15141042|emb|CAC49555.1| putative dehydrogenase, oxidoreductase FAD flavoprotein [Sinorhizobium meliloti 1021] Length=401 Score = 293 bits (750), Expect = 4e-77, Method: Compositional matrix adjust. Identities = 181/404 (45%), Positives = 235/404 (59%), Gaps = 20/404 (4%) Query 3 RVVVIGSGFAGLWAALGAARRLDELAVLAGTVDVMVVSNKPFHDIRVRNYEADLSACRIP 62 R+V++G+GFAG++AAL AAR D V +++ +VS +P IR R YE P Sbjct 2 RLVIVGAGFAGMYAALSAARLRDIEGVSPEELEIALVSPEPTLVIRPRLYEPSPETLTAP 61 Query 63 LGDVLGPAGVAHVTAEVTAID----------ADGRRVTTSTGASYSYDRLVLASGSHVVK 112 L +V VA+V V A+D A+G R T Y RLVLA+GS + + Sbjct 62 LQNVFDAVDVAYVQGSVEAVDTKAGTVEVVNAEGERKT------LQYHRLVLATGSRLFR 115 Query 113 PALPGLAEFGFDVDTYDGAVRLQQHLQGLAGGPLTSAAATVVVVGAGLTGIETACELPGR 172 P + GLAE+ F +D D A+ L +HL LA P ++A T+VV GAG TGIE A E+P R Sbjct 116 PNISGLAEYAFSIDNVDDAIALDRHLHELAKMPASAARDTIVVAGAGFTGIEAATEMPSR 175 Query 173 LHALFARGDGVTPRVVLIDHNPFVGSDMGLSARPVIEQALLDNGVETRTGVSVAAVSPGG 232 L LF + PRV++ID + V DMG ARP+IE AL GVETR V+++ G Sbjct 176 LRTLFDKT--ANPRVIIIDRSSAVAPDMGEGARPIIEDALRRLGVETRLNAGVSSLDKSG 233 Query 233 VTLSSGERLAAATVVWCAGMRASRLTEQLPVARDRLGRLQVDDYLRVIGVPAMFAAGDVA 292 VTLS+GE + TV+W AGMRA+ +T ++P RD+ RL VD LRV VP +FA GD A Sbjct 234 VTLSTGEHIETMTVIWAAGMRANPVTTKIPGERDKFDRLLVDGCLRVPSVPGVFATGDAA 293 Query 293 AARMDD-EHLSVMSCQHGRPMGRYAGCNVINDLFDQPLLALRIPWYVTVLDLGSAGAVYT 351 A DD + ++MSCQH MG +AG N +L P YVT LDLG AGA++T Sbjct 294 RAACDDCGNYALMSCQHATRMGAFAGNNAAAELLGVPPRQYHQKAYVTCLDLGDAGALFT 353 Query 352 EGWERKVVSQGAPAKTTKQSINTRRIYPPLNGSRADLLAAAAPR 395 GW+R+V G AK TKQ INT IYPP RA LA+A P Sbjct 354 RGWDREVEMVGEKAKATKQEINTVWIYPP-KPERAAALASADPE 396 >gi|27377903|ref|NP_769432.1| dehydrogenase, oxidoreductase FAD flavoprotein [Bradyrhizobium japonicum USDA 110] gi|27351049|dbj|BAC48057.1| bll2792 [Bradyrhizobium japonicum USDA 110] Length=401 Score = 293 bits (749), Expect = 5e-77, Method: Compositional matrix adjust. Identities = 175/383 (46%), Positives = 225/383 (59%), Gaps = 7/383 (1%) Query 3 RVVVIGSGFAGLWAALGAARRLDELAVLAGTVDVMVVSNKPFHDIRVRNYEADLSACRIP 62 R+++IG+GFAG++AAL +AR D V +++ +++ +P +R R YE P Sbjct 2 RLLIIGAGFAGMYAALSSARLRDIQGVSPDDLEIALIAPEPTLVVRPRLYEPKPETLTAP 61 Query 63 LGDVLGPAGVAHVTAEVTAIDADGRRVTTSTG----ASYSYDRLVLASGSHVVKPALPGL 118 L DVL V ++ ID R V +T + SYDRLV+A+GS + +P +PGL Sbjct 62 LLDVLRAIDVDYIQGSAETIDTKARMVQIATPRGTRTTLSYDRLVIATGSRLFRPNIPGL 121 Query 119 AEFGFDVDTYDGAVRLQQHLQGLAGGPLTSAAATVVVVGAGLTGIETACELPGRLHALFA 178 AE GF VD+ D A+ L +HL GLA P + TVVV G G TGIE A ELP RL +F Sbjct 122 AEHGFSVDSLDDAIALDKHLHGLADRPAVNGRDTVVVAGGGFTGIEAATELPARLRNIF- 180 Query 179 RGDGVTPRVVLIDHNPFVGSDMGLSARPVIEQALLDNGVETRTGVSVAAVSPGGVTLSSG 238 G RV++++ N + DMG + RP+IE AL GVE R G V ++ GVTLS+G Sbjct 181 -GKDSRTRVIIVERNSAIAPDMGENPRPLIEDALRKLGVEMRLGAGVVSLDKSGVTLSTG 239 Query 239 ERLAAATVVWCAGMRASRLTEQLPVARDRLGRLQVDDYLRVIGVPAMFAAGDVAAARMDD 298 E + TVVW AG+RA+ LT Q+P D GRL VD LRV V +FA GD A A DD Sbjct 240 EHIETETVVWAAGIRAAPLTAQIPAEHDNFGRLLVDRDLRVPVVAGVFATGDAARAACDD 299 Query 299 E-HLSVMSCQHGRPMGRYAGCNVINDLFDQPLLALRIPWYVTVLDLGSAGAVYTEGWERK 357 E + ++MSCQH MG +AG N +L P YVT LDLG AGAV+T GWERK Sbjct 300 EGNYALMSCQHATRMGAFAGNNAAAELLGVPTRPYHQKAYVTCLDLGEAGAVFTRGWERK 359 Query 358 VVSQGAPAKTTKQSINTRRIYPP 380 V G AK TKQ INT IYPP Sbjct 360 VELVGDVAKKTKQEINTVWIYPP 382 Lambda K H 0.320 0.136 0.404 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 788774687856 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40