BLASTP 2.2.25+


Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           15,229,318 sequences; 5,219,829,388 total letters



Query= Rv1813c

Length=143
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|15608950|ref|NP_216329.1|  hypothetical protein Rv1813c [Mycob...   292    9e-78
gi|3366597|gb|AAC28395.1|  putative open reading frame [Mycobacte...   206    1e-51
gi|240173178|ref|ZP_04751836.1|  hypothetical protein MkanA1_2794...   152    1e-35
gi|183982546|ref|YP_001850837.1|  hypothetical protein MMAR_2533 ...   137    4e-31
gi|296165794|ref|ZP_06848300.1|  conserved hypothetical protein [...   137    5e-31
gi|183981448|ref|YP_001849739.1|  hypothetical protein MMAR_1426 ...   122    1e-26
gi|240170411|ref|ZP_04749070.1|  hypothetical protein MkanA1_1395...   117    7e-25
gi|15840716|ref|NP_335753.1|  hypothetical protein MT1307 [Mycoba...  88.6    3e-16
gi|15608409|ref|NP_215785.1|  hypothetical protein Rv1269c [Mycob...  87.8    5e-16
gi|254231526|ref|ZP_04924853.1|  hypothetical protein TBCG_01250 ...  87.4    6e-16
gi|240173140|ref|ZP_04751798.1|  hypothetical protein MkanA1_2775...  87.0    7e-16
gi|183984691|ref|YP_001852982.1|  hypothetical protein MMAR_4723 ...  85.5    2e-15
gi|118619215|ref|YP_907547.1|  hypothetical protein MUL_4016 [Myc...  84.7    4e-15
gi|183984124|ref|YP_001852415.1|  hypothetical protein MMAR_4153 ...  84.7    4e-15
gi|296140994|ref|YP_003648237.1|  hypothetical protein Tpau_3313 ...  57.0    8e-07
gi|240173458|ref|ZP_04752116.1|  hypothetical protein MkanA1_2936...  55.8    2e-06
gi|262201902|ref|YP_003273110.1|  hypothetical protein Gbro_1963 ...  53.5    1e-05
gi|119489310|ref|ZP_01622117.1|  hypothetical protein L8106_07641...  53.1    1e-05
gi|294994825|ref|ZP_06800516.1|  hypothetical protein Mtub2_10022...  53.1    1e-05
gi|326385281|ref|ZP_08206943.1|  hypothetical protein SCNU_20142 ...  52.0    3e-05
gi|296164287|ref|ZP_06846873.1|  conserved hypothetical protein [...  51.6    4e-05
gi|54025836|ref|YP_120078.1|  hypothetical protein nfa38660 [Noca...  50.8    6e-05
gi|209525998|ref|ZP_03274531.1|  conserved hypothetical protein [...  44.7    0.005
gi|284051993|ref|ZP_06382203.1|  hypothetical protein AplaP_11031...  42.0    0.033
gi|326383688|ref|ZP_08205373.1|  hypothetical protein SCNU_12152 ...  40.4    0.098
gi|54024135|ref|YP_118377.1|  hypothetical protein nfa21670 [Noca...  36.2    1.5  
gi|158336921|ref|YP_001518096.1|  hypothetical protein AM1_3792 [...  35.4    2.7  
gi|30424697|ref|NP_780305.1|  starch-binding domain-containing pr...  35.0    3.3  
gi|110002651|gb|AAI18616.1|  Stbd1 protein [Mus musculus]             35.0    4.1  
gi|190574895|ref|YP_001972740.1|  hypothetical protein Smlt2996 [...  34.7    4.3  
gi|269120985|ref|YP_003309162.1|  hypothetical protein Sterm_2378...  34.7    5.5  
gi|326381446|ref|ZP_08203140.1|  hypothetical protein SCNU_00805 ...  34.3    5.5  
gi|126653006|ref|ZP_01725146.1|  hypothetical protein BB14905_190...  34.3    5.9  
gi|170079327|ref|YP_001735965.1|  serine/threonine-protein kinase...  34.3    6.2  
gi|241205439|ref|YP_002976535.1|  hypothetical protein Rleg_2733 ...  33.9    7.3  


>gi|15608950|ref|NP_216329.1| hypothetical protein Rv1813c [Mycobacterium tuberculosis H37Rv]
 gi|15841283|ref|NP_336320.1| hypothetical protein MT1861 [Mycobacterium tuberculosis CDC1551]
 gi|31793002|ref|NP_855495.1| hypothetical protein Mb1843c [Mycobacterium bovis AF2122/97]
 82 more sequence titles
 Length=143

 Score =  292 bits (748),  Expect = 9e-78, Method: Compositional matrix adjust.
 Identities = 143/143 (100%), Positives = 143/143 (100%), Gaps = 0/143 (0%)

Query  1    MITNLRRRTAMAAAGLGAALGLGILLVPTVDAHLANGSMSEVMMSEIAGLPIPPIIHYGA  60
            MITNLRRRTAMAAAGLGAALGLGILLVPTVDAHLANGSMSEVMMSEIAGLPIPPIIHYGA
Sbjct  1    MITNLRRRTAMAAAGLGAALGLGILLVPTVDAHLANGSMSEVMMSEIAGLPIPPIIHYGA  60

Query  61   IAYAPSGASGKAWHQRTPARAEQVALEKCGDKTCKVVSRFTRCGAVAYNGSKYQGGTGLT  120
            IAYAPSGASGKAWHQRTPARAEQVALEKCGDKTCKVVSRFTRCGAVAYNGSKYQGGTGLT
Sbjct  61   IAYAPSGASGKAWHQRTPARAEQVALEKCGDKTCKVVSRFTRCGAVAYNGSKYQGGTGLT  120

Query  121  RRAAEDDAVNRLEGGRIVNWACN  143
            RRAAEDDAVNRLEGGRIVNWACN
Sbjct  121  RRAAEDDAVNRLEGGRIVNWACN  143


>gi|3366597|gb|AAC28395.1| putative open reading frame [Mycobacterium tuberculosis]
Length=124

 Score =  206 bits (524),  Expect = 1e-51, Method: Compositional matrix adjust.
 Identities = 101/102 (99%), Positives = 102/102 (100%), Gaps = 0/102 (0%)

Query  1    MITNLRRRTAMAAAGLGAALGLGILLVPTVDAHLANGSMSEVMMSEIAGLPIPPIIHYGA  60
            MITNLRRRTAMAAAGLGAALGLGILLVPTVDAHLANGSMSEVMMSEIAGLPIPPIIHYGA
Sbjct  14   MITNLRRRTAMAAAGLGAALGLGILLVPTVDAHLANGSMSEVMMSEIAGLPIPPIIHYGA  73

Query  61   IAYAPSGASGKAWHQRTPARAEQVALEKCGDKTCKVVSRFTR  102
            IAYAPSGASGKAWHQRTPARAEQVALEKCGDKTCKVVSRFT+
Sbjct  74   IAYAPSGASGKAWHQRTPARAEQVALEKCGDKTCKVVSRFTQ  115


>gi|240173178|ref|ZP_04751836.1| hypothetical protein MkanA1_27946 [Mycobacterium kansasii ATCC 
12478]
Length=145

 Score =  152 bits (385),  Expect = 1e-35, Method: Compositional matrix adjust.
 Identities = 78/142 (55%), Positives = 102/142 (72%), Gaps = 7/142 (4%)

Query  6    RRRTAMAAAGLGAALGLGIL---LVPTVDAHLANGSMSEV-MMSEIAGLPIPPIIHYGAI  61
            RRR  + AA +GA +GL +L   L+P +DAH+ +  +SE+ M+ E+   P+PP IHYGAI
Sbjct  5    RRRITLVAATIGATVGLMVLALPLIPPLDAHIDSAVLSEMGMLPEV---PVPPRIHYGAI  61

Query  62   AYAPSGASGKAWHQRTPARAEQVALEKCGDKTCKVVSRFTRCGAVAYNGSKYQGGTGLTR  121
            AYAP+G  GK+ +  T A+AE+VAL++CG  TCKV+  F RCGAVAY+GS Y GG+GLT 
Sbjct  62   AYAPTGEWGKSRNYLTLAKAEEVALDQCGLDTCKVLINFKRCGAVAYDGSTYHGGSGLTL  121

Query  122  RAAEDDAVNRLEGGRIVNWACN  143
              A  DA+NRL  GRIVNW CN
Sbjct  122  SDAMADAINRLGAGRIVNWLCN  143


>gi|183982546|ref|YP_001850837.1| hypothetical protein MMAR_2533 [Mycobacterium marinum M]
 gi|183175872|gb|ACC40982.1| conserved hypothetical secreted protein [Mycobacterium marinum 
M]
Length=142

 Score =  137 bits (346),  Expect = 4e-31, Method: Compositional matrix adjust.
 Identities = 75/141 (54%), Positives = 95/141 (68%), Gaps = 5/141 (3%)

Query  6    RRRTAMAAAGLGAALGL---GILLVPTVDAHLANGSMSEVMMSEIAGLPIPPIIHYGAIA  62
            RRR A+A A +GA  GL   G+ L  ++ A++    MSE  M  +   P+P I+HYGAIA
Sbjct  4    RRRIALATATVGATAGLMFIGLALTGSIGANMDRAVMSE--MGMLPEGPVPLIVHYGAIA  61

Query  63   YAPSGASGKAWHQRTPARAEQVALEKCGDKTCKVVSRFTRCGAVAYNGSKYQGGTGLTRR  122
            YAP+GA GKA    +   AEQ AL++CG  +CKV+  F RCGAVAYN  KYQGG+G T  
Sbjct  62   YAPNGAFGKARRFTSRFGAEQAALKQCGLDSCKVLINFNRCGAVAYNNLKYQGGSGWTLS  121

Query  123  AAEDDAVNRLEGGRIVNWACN  143
            AA+ DA++RL GG IVNWACN
Sbjct  122  AAQQDAIDRLGGGWIVNWACN  142


>gi|296165794|ref|ZP_06848300.1| conserved hypothetical protein [Mycobacterium parascrofulaceum 
ATCC BAA-614]
 gi|295898848|gb|EFG78348.1| conserved hypothetical protein [Mycobacterium parascrofulaceum 
ATCC BAA-614]
Length=141

 Score =  137 bits (345),  Expect = 5e-31, Method: Compositional matrix adjust.
 Identities = 75/144 (53%), Positives = 95/144 (66%), Gaps = 4/144 (2%)

Query  1    MITNLRRRTAMAAAGLGAALGLGILLVPTVDAHLANGSMSEV-MMSEIAGLPIPPIIHYG  59
            M+   R R  +A A +GA  GL I  +P +    AN  M E  +M E    P+PP+I YG
Sbjct  1    MMIKRRYRIGLAVATVGATAGLMIAALPFMPGVGANTLMPETAVMPE---GPVPPVIRYG  57

Query  60   AIAYAPSGASGKAWHQRTPARAEQVALEKCGDKTCKVVSRFTRCGAVAYNGSKYQGGTGL  119
            A+AYAPSGA G+     T  RA QVAL++CG K CK++  + RCGAVAY+G+ Y GG G+
Sbjct  58   AMAYAPSGAWGRTRGYGTRERAIQVALDQCGVKDCKLIVSYQRCGAVAYDGTTYLGGKGV  117

Query  120  TRRAAEDDAVNRLEGGRIVNWACN  143
            TR  AE+DA+NRL GGRIVNWACN
Sbjct  118  TRSLAEEDAINRLGGGRIVNWACN  141


>gi|183981448|ref|YP_001849739.1| hypothetical protein MMAR_1426 [Mycobacterium marinum M]
 gi|183174774|gb|ACC39884.1| conserved hypothetical secreted protein [Mycobacterium marinum 
M]
Length=136

 Score =  122 bits (307),  Expect = 1e-26, Method: Compositional matrix adjust.
 Identities = 76/143 (54%), Positives = 95/143 (67%), Gaps = 8/143 (5%)

Query  1    MITNLRRRTAMAAAGLGAALGLGILLVPTVDAHLANGSMSEVMMSEIAGLPIPPIIHYGA  60
            M+TNLRRR A+    L AALGLG+LL+    AHL + S        I G  + PI +YGA
Sbjct  1    MMTNLRRRAALIVVTLAAALGLGLLLLSPAGAHLYDDS--------ITGRIVAPITYYGA  52

Query  61   IAYAPSGASGKAWHQRTPARAEQVALEKCGDKTCKVVSRFTRCGAVAYNGSKYQGGTGLT  120
            IAY P+G +G++W+ RT A+AE  AL+ CG + CKV+S F RCGAVA++GS   GG G T
Sbjct  53   IAYGPNGVNGRSWNNRTRAQAESSALKLCGVEGCKVLSSFVRCGAVAFDGSARHGGVGRT  112

Query  121  RRAAEDDAVNRLEGGRIVNWACN  143
            R+ AEDDA  RL GG I  WACN
Sbjct  113  RQMAEDDARFRLGGGWIETWACN  135


>gi|240170411|ref|ZP_04749070.1| hypothetical protein MkanA1_13955 [Mycobacterium kansasii ATCC 
12478]
Length=125

 Score =  117 bits (292),  Expect = 7e-25, Method: Compositional matrix adjust.
 Identities = 62/131 (48%), Positives = 81/131 (62%), Gaps = 8/131 (6%)

Query  14   AGLGAALGLGILLVPTVDAHLANGSMSEVMMSEIAGLPIPPI-IHYGAIAYAPSGASGKA  72
            +GL  A  + +  +    AH+  G M+ V         +PP  ++YGAIAY   G++GKA
Sbjct  2    SGLAVAAAMTVTQIHPAGAHIHRGEMTHVS-------NMPPFPVYYGAIAYGHDGSNGKA  54

Query  73   WHQRTPARAEQVALEKCGDKTCKVVSRFTRCGAVAYNGSKYQGGTGLTRRAAEDDAVNRL  132
            W   + A+A+  ALE CG  TC VVS FTRCGAVA++G+KY GG G  R AAE  A+  L
Sbjct  55   WRHLSKAQAKHRALELCGIDTCTVVSVFTRCGAVAHDGAKYHGGYGYNRSAAEAHAMANL  114

Query  133  EGGRIVNWACN  143
             GGRIV+WACN
Sbjct  115  GGGRIVDWACN  125


>gi|15840716|ref|NP_335753.1| hypothetical protein MT1307 [Mycobacterium tuberculosis CDC1551]
 gi|13880905|gb|AAK45567.1| hypothetical protein MT1307 [Mycobacterium tuberculosis CDC1551]
Length=140

 Score = 88.6 bits (218),  Expect = 3e-16, Method: Compositional matrix adjust.
 Identities = 45/86 (53%), Positives = 56/86 (66%), Gaps = 0/86 (0%)

Query  58   YGAIAYAPSGASGKAWHQRTPARAEQVALEKCGDKTCKVVSRFTRCGAVAYNGSKYQGGT  117
            YGAIAY+ +G+ G++W   T A AE  A++ CG   CKV++ FT CGAVA N   YQGG 
Sbjct  55   YGAIAYSGNGSWGRSWDYPTRAAAEATAVKSCGYSDCKVLTSFTACGAVAANDRAYQGGV  114

Query  118  GLTRRAAEDDAVNRLEGGRIVNWACN  143
            G T  AA  DA+ +L GG I  WACN
Sbjct  115  GPTLAAAMKDALTKLGGGYIDTWACN  140


>gi|15608409|ref|NP_215785.1| hypothetical protein Rv1269c [Mycobacterium tuberculosis H37Rv]
 gi|31792461|ref|NP_854954.1| hypothetical protein Mb1300c [Mycobacterium bovis AF2122/97]
 gi|121637197|ref|YP_977420.1| hypothetical protein BCG_1328c [Mycobacterium bovis BCG str. 
Pasteur 1173P2]
 43 more sequence titles
 Length=124

 Score = 87.8 bits (216),  Expect = 5e-16, Method: Compositional matrix adjust.
 Identities = 45/86 (53%), Positives = 56/86 (66%), Gaps = 0/86 (0%)

Query  58   YGAIAYAPSGASGKAWHQRTPARAEQVALEKCGDKTCKVVSRFTRCGAVAYNGSKYQGGT  117
            YGAIAY+ +G+ G++W   T A AE  A++ CG   CKV++ FT CGAVA N   YQGG 
Sbjct  39   YGAIAYSGNGSWGRSWDYPTRAAAEATAVKSCGYSDCKVLTSFTACGAVAANDRAYQGGV  98

Query  118  GLTRRAAEDDAVNRLEGGRIVNWACN  143
            G T  AA  DA+ +L GG I  WACN
Sbjct  99   GPTLAAAMKDALTKLGGGYIDTWACN  124


>gi|254231526|ref|ZP_04924853.1| hypothetical protein TBCG_01250 [Mycobacterium tuberculosis C]
 gi|298524772|ref|ZP_07012181.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
 gi|308231800|ref|ZP_07413774.2| conserved secreted protein [Mycobacterium tuberculosis SUMu001]
 26 more sequence titles
 Length=121

 Score = 87.4 bits (215),  Expect = 6e-16, Method: Compositional matrix adjust.
 Identities = 45/86 (53%), Positives = 56/86 (66%), Gaps = 0/86 (0%)

Query  58   YGAIAYAPSGASGKAWHQRTPARAEQVALEKCGDKTCKVVSRFTRCGAVAYNGSKYQGGT  117
            YGAIAY+ +G+ G++W   T A AE  A++ CG   CKV++ FT CGAVA N   YQGG 
Sbjct  36   YGAIAYSGNGSWGRSWDYPTRAAAEATAVKSCGYSDCKVLTSFTACGAVAANDRAYQGGV  95

Query  118  GLTRRAAEDDAVNRLEGGRIVNWACN  143
            G T  AA  DA+ +L GG I  WACN
Sbjct  96   GPTLAAAMKDALTKLGGGYIDTWACN  121


>gi|240173140|ref|ZP_04751798.1| hypothetical protein MkanA1_27756 [Mycobacterium kansasii ATCC 
12478]
Length=132

 Score = 87.0 bits (214),  Expect = 7e-16, Method: Compositional matrix adjust.
 Identities = 43/86 (50%), Positives = 57/86 (67%), Gaps = 0/86 (0%)

Query  58   YGAIAYAPSGASGKAWHQRTPARAEQVALEKCGDKTCKVVSRFTRCGAVAYNGSKYQGGT  117
            YGAIAY+ +G+ G++W   T A AE  A++ CG   CKV++ FT CGAVA     Y+GGT
Sbjct  47   YGAIAYSSNGSWGRSWAYPTKAAAEATAVKSCGYSDCKVLTSFTACGAVAAKDRDYRGGT  106

Query  118  GLTRRAAEDDAVNRLEGGRIVNWACN  143
            G    AA  DA+++L+GG I  WACN
Sbjct  107  GPNLSAAMKDALSKLDGGYIDTWACN  132


>gi|183984691|ref|YP_001852982.1| hypothetical protein MMAR_4723 [Mycobacterium marinum M]
 gi|183178017|gb|ACC43127.1| conserved hypothetical secreted protein [Mycobacterium marinum 
M]
Length=155

 Score = 85.5 bits (210),  Expect = 2e-15, Method: Compositional matrix adjust.
 Identities = 44/86 (52%), Positives = 56/86 (66%), Gaps = 0/86 (0%)

Query  58   YGAIAYAPSGASGKAWHQRTPARAEQVALEKCGDKTCKVVSRFTRCGAVAYNGSKYQGGT  117
            YGAIA A +GA GK W  R  A+AE  AL  CG  +C V+S FTRCGA+A++G  + GG 
Sbjct  70   YGAIAVADNGAVGKTWGHRKRAQAEIHALTACGHPSCNVLSVFTRCGAIAHDGQNFHGGL  129

Query  118  GLTRRAAEDDAVNRLEGGRIVNWACN  143
            G + +AA  DA  RL GG ++  ACN
Sbjct  130  GRSHQAAGHDAKARLGGGWVLTSACN  155


>gi|118619215|ref|YP_907547.1| hypothetical protein MUL_4016 [Mycobacterium ulcerans Agy99]
 gi|118571325|gb|ABL06076.1| conserved hypothetical secreted protein [Mycobacterium ulcerans 
Agy99]
Length=111

 Score = 84.7 bits (208),  Expect = 4e-15, Method: Compositional matrix adjust.
 Identities = 43/87 (50%), Positives = 57/87 (66%), Gaps = 0/87 (0%)

Query  57   HYGAIAYAPSGASGKAWHQRTPARAEQVALEKCGDKTCKVVSRFTRCGAVAYNGSKYQGG  116
             YGAIAY+  G+ G+A H  T A AE  A++ CG   C+V++ FT CGAVA +G  ++GG
Sbjct  25   QYGAIAYSGDGSWGRASHYPTRAAAEATAVKLCGYSDCRVLTTFTACGAVAADGKTFEGG  84

Query  117  TGLTRRAAEDDAVNRLEGGRIVNWACN  143
             G T  AA  DA+++L GG I  WACN
Sbjct  85   VGPTLSAAMKDALSKLGGGYIDTWACN  111


>gi|183984124|ref|YP_001852415.1| hypothetical protein MMAR_4153 [Mycobacterium marinum M]
 gi|183177450|gb|ACC42560.1| conserved hypothetical secreted protein [Mycobacterium marinum 
M]
Length=122

 Score = 84.7 bits (208),  Expect = 4e-15, Method: Compositional matrix adjust.
 Identities = 44/87 (51%), Positives = 57/87 (66%), Gaps = 0/87 (0%)

Query  57   HYGAIAYAPSGASGKAWHQRTPARAEQVALEKCGDKTCKVVSRFTRCGAVAYNGSKYQGG  116
             YGAIAY+  G+ G+A H  T A AE  A++ CG   CKV++ FT CGAVA +G  ++GG
Sbjct  36   QYGAIAYSGDGSWGRASHYPTRAAAEATAVKLCGYSDCKVLTTFTACGAVAADGKTFEGG  95

Query  117  TGLTRRAAEDDAVNRLEGGRIVNWACN  143
             G T  AA  DA+++L GG I  WACN
Sbjct  96   VGPTLSAAMKDALSKLGGGYIDTWACN  122


>gi|296140994|ref|YP_003648237.1| hypothetical protein Tpau_3313 [Tsukamurella paurometabola DSM 
20162]
 gi|296029128|gb|ADG79898.1| conserved putative secreted protein [Tsukamurella paurometabola 
DSM 20162]
Length=126

 Score = 57.0 bits (136),  Expect = 8e-07, Method: Compositional matrix adjust.
 Identities = 37/90 (42%), Positives = 49/90 (55%), Gaps = 4/90 (4%)

Query  54   PIIHYGAIAYAPSGASGKAWHQRTPARAEQVALEKCGDKTCKVVSRFTR-CGAVAYNGSK  112
            P + YGAIA   +GA G+A      A AE+VAL  C D  C++++ F   CGAVA   + 
Sbjct  35   PGVFYGAIAVGSNGAWGRALDYGNRATAERVALSYC-DGNCRILASFVNGCGAVAKTRTS  93

Query  113  YQGGTGLTRRAAEDDAVNRLEGGRIVNWAC  142
            Y G  G T   A++ A+    GG I  WAC
Sbjct  94   YWGNVGDTLGVAQNRALR--NGGYIYTWAC  121


>gi|240173458|ref|ZP_04752116.1| hypothetical protein MkanA1_29366 [Mycobacterium kansasii ATCC 
12478]
Length=125

 Score = 55.8 bits (133),  Expect = 2e-06, Method: Compositional matrix adjust.
 Identities = 42/90 (47%), Positives = 49/90 (55%), Gaps = 3/90 (3%)

Query  57   HYGAIAYAPSG-ASGKAWHQRTPARAEQVALEKCGDKTCKVVSRFTRCGAVAYNG-SKYQ  114
            + GAIAY+PSG   G+  H  + A AE  AL  CG   CKV+  FT CGA+A N    + 
Sbjct  36   YVGAIAYSPSGKVFGRTKHAPSRAAAESAALGACGYSDCKVLVTFTDCGAIAENSRGDHA  95

Query  115  GGTGLTRRAAEDDAVNRL-EGGRIVNWACN  143
            GG G T  AAE DA   L   G I  W CN
Sbjct  96   GGYGPTLLAAEQDAAKNLGTSGWIGTWYCN  125


>gi|262201902|ref|YP_003273110.1| hypothetical protein Gbro_1963 [Gordonia bronchialis DSM 43247]
 gi|262085249|gb|ACY21217.1| hypothetical protein Gbro_1963 [Gordonia bronchialis DSM 43247]
Length=131

 Score = 53.5 bits (127),  Expect = 1e-05, Method: Compositional matrix adjust.
 Identities = 47/143 (33%), Positives = 70/143 (49%), Gaps = 20/143 (13%)

Query  4    NLRRRTAMAAAGLGAALGLGILLVPTVDAHLANGSMSEVMMSEIAGLPIPPIIHYGAIAY  63
            +LR+R ++ A  L   +G   L++P+V         SE   +   G       +YGA+A 
Sbjct  2    SLRKRLSILALTLAGVVG--ALILPSV---------SEPAPAHAYG------YYYGALAL  44

Query  64   APSG-ASGKAWHQRTPARAEQVALEKCGDKTCKVVSRFTR-CGAVAYNGSKYQGGTGLTR  121
            + S    G+A    + A A Q AL  CG   CKVV+RF   CGA+A + S +  G G + 
Sbjct  45   STSERYVGRALDYDSYAEASQAALRACGYADCKVVTRFANGCGAIAESPSYWGFGNGSSL  104

Query  122  RAAEDDAVNRL-EGGRIVNWACN  143
             +A+ +A+     G  IV WAC 
Sbjct  105  YSAQSEALYYSGSGAEIVYWACT  127


>gi|119489310|ref|ZP_01622117.1| hypothetical protein L8106_07641 [Lyngbya sp. PCC 8106]
 gi|119454784|gb|EAW35929.1| hypothetical protein L8106_07641 [Lyngbya sp. PCC 8106]
Length=123

 Score = 53.1 bits (126),  Expect = 1e-05, Method: Compositional matrix adjust.
 Identities = 44/109 (41%), Positives = 55/109 (51%), Gaps = 7/109 (6%)

Query  40   SEVMMSEIAGLPIPPIIHYGAIAYAPSG-ASGKAWHQRTPARAEQVALEKCGDKTCKVVS  98
            +E+++S IA     P   YGAIA  P G   G A+   +  +AEQ ALE+CG+  C+V  
Sbjct  14   TEILVSPIASAQ--PSDSYGAIAITPDGQVWGYAYDYPSREQAEQRALEECGESNCQVQV  71

Query  99   RFTR-CGAVAYNGS-KYQGGTGLTRRAAEDDAVNRLEGG--RIVNWACN  143
             F   CGAVA N   K       TR+ AE  AV     G  RI  WAC 
Sbjct  72   WFKNACGAVAKNEEGKLGWAWADTRKQAEASAVAACGTGTCRIETWACT  120


>gi|294994825|ref|ZP_06800516.1| hypothetical protein Mtub2_10022 [Mycobacterium tuberculosis 
210]
Length=48

 Score = 53.1 bits (126),  Expect = 1e-05, Method: Compositional matrix adjust.
 Identities = 26/48 (55%), Positives = 31/48 (65%), Gaps = 0/48 (0%)

Query  96   VVSRFTRCGAVAYNGSKYQGGTGLTRRAAEDDAVNRLEGGRIVNWACN  143
            +++ FT CGAVA N   YQGG G T  AA  DA+ +L GG I  WACN
Sbjct  1    MLTSFTACGAVAANDRAYQGGVGPTLAAAMKDALTKLGGGYIDTWACN  48


>gi|326385281|ref|ZP_08206943.1| hypothetical protein SCNU_20142 [Gordonia neofelifaecis NRRL 
B-59395]
 gi|326195990|gb|EGD53202.1| hypothetical protein SCNU_20142 [Gordonia neofelifaecis NRRL 
B-59395]
Length=134

 Score = 52.0 bits (123),  Expect = 3e-05, Method: Compositional matrix adjust.
 Identities = 34/89 (39%), Positives = 47/89 (53%), Gaps = 2/89 (2%)

Query  57   HYGAIAYAPS-GASGKAWHQRTPARAEQVALEKCGDKTCKVVSRF-TRCGAVAYNGSKYQ  114
            +YGAIA +PS GA+G+A      + A   AL  CG   C+VV +    CGA+A + S + 
Sbjct  42   YYGAIALSPSTGATGRALDYPDYSSASNAALSWCGYSDCQVVVQMRNACGAIAKSSSYWG  101

Query  115  GGTGLTRRAAEDDAVNRLEGGRIVNWACN  143
               G     AE +A+    GG I +WAC 
Sbjct  102  YAWGADLYTAESNALYYSGGGYIHDWACT  130


>gi|296164287|ref|ZP_06846873.1| conserved hypothetical protein [Mycobacterium parascrofulaceum 
ATCC BAA-614]
 gi|295900349|gb|EFG79769.1| conserved hypothetical protein [Mycobacterium parascrofulaceum 
ATCC BAA-614]
Length=61

 Score = 51.6 bits (122),  Expect = 4e-05, Method: Compositional matrix adjust.
 Identities = 35/92 (39%), Positives = 44/92 (48%), Gaps = 36/92 (39%)

Query  52   IPPIIHYGAIAYAPSGASGKAWHQRTPARAEQVALEKCGDKTCKVVSRFTRCGAVAYNGS  111
            +P ++ YGAIAYAPSGA G++W  R P +A                         A NG 
Sbjct  6    VPFVMRYGAIAYAPSGAWGRSW--RYPNQA-------------------------AANGY  38

Query  112  KYQGGTGLTRRAAEDDAVNRLEGGRIVNWACN  143
             +Q           DDA+NRL GG+IVNW CN
Sbjct  39   THQ---------IADDALNRLGGGKIVNWVCN  61


>gi|54025836|ref|YP_120078.1| hypothetical protein nfa38660 [Nocardia farcinica IFM 10152]
 gi|54017344|dbj|BAD58714.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length=112

 Score = 50.8 bits (120),  Expect = 6e-05, Method: Compositional matrix adjust.
 Identities = 31/86 (37%), Positives = 49/86 (57%), Gaps = 0/86 (0%)

Query  57   HYGAIAYAPSGASGKAWHQRTPARAEQVALEKCGDKTCKVVSRFTRCGAVAYNGSKYQGG  116
            +YGAIA + SGA G A +  + + AEQ A++ CG     +VS    CG +A + +++   
Sbjct  21   YYGAIATSRSGAYGIANNYGSFSDAEQAAVDACGAGCRVLVSWSNGCGVLASSNTQWSAA  80

Query  117  TGLTRRAAEDDAVNRLEGGRIVNWAC  142
               +  AA   A++RL GG +V+W C
Sbjct  81   ARSSYTAARSAALSRLSGGWVVDWRC  106


>gi|209525998|ref|ZP_03274531.1| conserved hypothetical protein [Arthrospira maxima CS-328]
 gi|209493524|gb|EDZ93846.1| conserved hypothetical protein [Arthrospira maxima CS-328]
Length=126

 Score = 44.7 bits (104),  Expect = 0.005, Method: Compositional matrix adjust.
 Identities = 34/115 (30%), Positives = 56/115 (49%), Gaps = 10/115 (8%)

Query  38   SMSEVMMSEIAGLPIPPII-----HYGAIAYAPSGASGKAWHQRTP--ARAEQVALEKCG  90
            S++ +++  + G+    I+     HYGAIA + +  +   +    P  A+A++ ALE CG
Sbjct  6    SLTGLILIALEGITTGAIVAQNRDHYGAIATSTTNPAIWGYSHDYPTLAQAQRYALEYCG  65

Query  91   DKTCKVVSRFTR-CGAVAYNGSKYQGGTGLTRRAAEDDAVNRLEGG--RIVNWAC  142
               C++   F   CGA+A NGS       + R  AE  ++     G  +I  WAC
Sbjct  66   QADCQIRVWFKNGCGAIATNGSNIGSAWAVNRAEAEARSIVACGQGDCKIEVWAC  120


>gi|284051993|ref|ZP_06382203.1| hypothetical protein AplaP_11031 [Arthrospira platensis str. 
Paraca]
 gi|291568823|dbj|BAI91095.1| hypothetical protein [Arthrospira platensis NIES-39]
Length=126

 Score = 42.0 bits (97),  Expect = 0.033, Method: Compositional matrix adjust.
 Identities = 33/115 (29%), Positives = 56/115 (49%), Gaps = 10/115 (8%)

Query  38   SMSEVMMSEIAGLPIPPII-----HYGAIAYAPSGASGKAWHQRTP--ARAEQVALEKCG  90
            S++ +++  + G+    I+     +YGAIA + +  +   +    P  A+A++ ALE CG
Sbjct  6    SLTGLILIALEGITTGAILAQNRDNYGAIATSTTNPAQWGYSHDYPTLAQAQRYALEYCG  65

Query  91   DKTCKVVSRFTR-CGAVAYNGSKYQGGTGLTRRAAEDDAVNRLEGG--RIVNWAC  142
               C++   F   CGA+A NGS       + R  AE  ++     G  +I  WAC
Sbjct  66   QADCQIRVWFKNGCGAIATNGSNIGSAWSVNRAEAEARSIVACGQGDCKIQVWAC  120


>gi|326383688|ref|ZP_08205373.1| hypothetical protein SCNU_12152 [Gordonia neofelifaecis NRRL 
B-59395]
 gi|326197452|gb|EGD54641.1| hypothetical protein SCNU_12152 [Gordonia neofelifaecis NRRL 
B-59395]
Length=298

 Score = 40.4 bits (93),  Expect = 0.098, Method: Compositional matrix adjust.
 Identities = 32/94 (35%), Positives = 48/94 (52%), Gaps = 11/94 (11%)

Query  52   IPPII-------HYGAIAYA-PSGASGKAWHQRTPARAEQVALEKCGDKTCKVVSRF-TR  102
            +PP +       +YG+IA +  +G  G + +  T   A   A+ KCG  TC+ V RF   
Sbjct  190  VPPAVPTTSSTTYYGSIAISRTTGDIGYSINNLTEESAVSAAMSKCGASTCETVLRFWNA  249

Query  103  CGAVAYNGSKYQGGTGL--TRRAAEDDAVNRLEG  134
            CGAVA +      G G   TR+ A D A+ +++G
Sbjct  250  CGAVAQSQENLYWGWGWAATRQGAIDTAIGQVKG  283


>gi|54024135|ref|YP_118377.1| hypothetical protein nfa21670 [Nocardia farcinica IFM 10152]
 gi|54015643|dbj|BAD57013.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length=138

 Score = 36.2 bits (82),  Expect = 1.5, Method: Compositional matrix adjust.
 Identities = 20/49 (41%), Positives = 27/49 (56%), Gaps = 1/49 (2%)

Query  85   ALEKCGDKTCKVVSRF-TRCGAVAYNGSKYQGGTGLTRRAAEDDAVNRL  132
            AL++CG   C +V +F   CGAVA  G++     G TR  AE  A+  L
Sbjct  62   ALQECGVDNCSIVVQFRNACGAVAVRGNEVAWAGGYTRVEAEQSALAEL  110


>gi|158336921|ref|YP_001518096.1| hypothetical protein AM1_3792 [Acaryochloris marina MBIC11017]
 gi|158307162|gb|ABW28779.1| conserved hypothetical protein [Acaryochloris marina MBIC11017]
Length=133

 Score = 35.4 bits (80),  Expect = 2.7, Method: Compositional matrix adjust.
 Identities = 34/130 (27%), Positives = 55/130 (43%), Gaps = 21/130 (16%)

Query  34   LANGSMSEVMMSEIAGLPIPPII----------HYGAIAYAP-SGASGKAWHQRTPARAE  82
            + +  +++V+M     +P   ++          +YGAIAY+  +G+ G ++   T   A+
Sbjct  1    MIHSKLAQVLMVTAFSMPTVSLVAVQPASANGNNYGAIAYSTATGSHGYSYDYSTAQAAQ  60

Query  83   QVALEKC----GDKTCKVVSRFTR-CGAVAYNGSKYQG-GTGLTRRAAEDDAVNRLE---  133
              AL  C    G   CK +  F   CGA+A       G G G+ R  AE  A+       
Sbjct  61   NAALRYCENYSGTGDCKSLVVFQNACGALAQTPDNSAGSGWGVDRPTAESFALQSCRQFG  120

Query  134  -GGRIVNWAC  142
               +I  W C
Sbjct  121  PNCKITRWVC  130


>gi|30424697|ref|NP_780305.1| starch-binding domain-containing protein 1 [Mus musculus]
 gi|81876921|sp|Q8C7E7.1|STBD1_MOUSE RecName: Full=Starch-binding domain-containing protein 1; AltName: 
Full=Genethonin-1
 gi|26341164|dbj|BAC34244.1| unnamed protein product [Mus musculus]
 gi|110002551|gb|AAI18662.1| Starch binding domain 1 [Mus musculus]
 gi|148673297|gb|EDL05244.1| DNA segment, Chr 5, ERATO Doi 593, expressed, isoform CRA_b [Mus 
musculus]
Length=338

 Score = 35.0 bits (79),  Expect = 3.3, Method: Compositional matrix adjust.
 Identities = 21/57 (37%), Positives = 31/57 (55%), Gaps = 2/57 (3%)

Query  80   RAEQVALEKCGDKTCKVVSRFTRCGAVAYNGSKYQGGTGLTRRAAEDDAVNRLEGGR  136
            RA+ V+ ++ G +  +VVSR +  G+V   GS       L +R   DD+ N L GGR
Sbjct  174  RAKAVSQDQAGHEDWEVVSRHSSWGSVGLGGSLEASRLSLNQRM--DDSTNSLVGGR  228


>gi|110002651|gb|AAI18616.1| Stbd1 protein [Mus musculus]
Length=279

 Score = 35.0 bits (79),  Expect = 4.1, Method: Compositional matrix adjust.
 Identities = 21/57 (37%), Positives = 31/57 (55%), Gaps = 2/57 (3%)

Query  80   RAEQVALEKCGDKTCKVVSRFTRCGAVAYNGSKYQGGTGLTRRAAEDDAVNRLEGGR  136
            RA+ V+ ++ G +  +VVSR +  G+V   GS       L +R   DD+ N L GGR
Sbjct  115  RAKAVSQDQAGHEDWEVVSRHSSWGSVGLGGSLEASRLSLNQRM--DDSTNSLVGGR  169


>gi|190574895|ref|YP_001972740.1| hypothetical protein Smlt2996 [Stenotrophomonas maltophilia K279a]
 gi|190012817|emb|CAQ46446.1| conserved hypothetical exported protein [Stenotrophomonas maltophilia 
K279a]
Length=172

 Score = 34.7 bits (78),  Expect = 4.3, Method: Compositional matrix adjust.
 Identities = 27/82 (33%), Positives = 44/82 (54%), Gaps = 11/82 (13%)

Query  58   YGAIAYAPSGASGKAWHQRTPARAEQVALEKC---GDKTCKVV-SRFTRCGAVAY-----  108
            +GA+A +P G +G A   +  A AE+ A+E+C   G   C VV + + +C AV       
Sbjct  68   WGAVASSPGGDAGSATGHQAKASAERQAVERCRQGGATDCTVVFTYYNQCYAVVRAARPD  127

Query  109  NGSKYQGGTGLTRRAAEDDAVN  130
            NG ++   TG T+  A++ A+ 
Sbjct  128  NGMRFN--TGATKEQAQERAIK  147


>gi|269120985|ref|YP_003309162.1| hypothetical protein Sterm_2378 [Sebaldella termitidis ATCC 33386]
 gi|268614863|gb|ACZ09231.1| hypothetical protein Sterm_2378 [Sebaldella termitidis ATCC 33386]
Length=251

 Score = 34.7 bits (78),  Expect = 5.5, Method: Compositional matrix adjust.
 Identities = 19/45 (43%), Positives = 23/45 (52%), Gaps = 1/45 (2%)

Query  51  PIPPIIHYGAIAYAPSGASG-KAWHQRTPARAEQVALEKCGDKTC  94
           P P I +YG IA  P   S   AW+ R    AE  AL+ CG  +C
Sbjct  43  PGPSITYYGGIAINPHTRSFYSAWNYRNGEEAEAAALKGCGGNSC  87


>gi|326381446|ref|ZP_08203140.1| hypothetical protein SCNU_00805 [Gordonia neofelifaecis NRRL 
B-59395]
 gi|326199693|gb|EGD56873.1| hypothetical protein SCNU_00805 [Gordonia neofelifaecis NRRL 
B-59395]
Length=128

 Score = 34.3 bits (77),  Expect = 5.5, Method: Compositional matrix adjust.
 Identities = 30/90 (34%), Positives = 42/90 (47%), Gaps = 4/90 (4%)

Query  57   HYGAIAYAP-SGASGKAWHQRTPARAEQVALEKCGDKTCKVVSR-FTRCGAVAYNGSKYQ  114
            +YGAIA +  +G +    +    A A++ A  KCG   C+ V R +  CGA A N    +
Sbjct  34   YYGAIAISQRTGRAAVVVNYHDGASAQRAAARKCGAGDCRWVVRMYKNCGAAAQNPRTRR  93

Query  115  GGTGL--TRRAAEDDAVNRLEGGRIVNWAC  142
             G     T   A+  A N   GGR + W C
Sbjct  94   WGWAYAPTLNGAKARARNAAGGGRSIVWGC  123


>gi|126653006|ref|ZP_01725146.1| hypothetical protein BB14905_19015 [Bacillus sp. B14905]
 gi|126590225|gb|EAZ84348.1| hypothetical protein BB14905_19015 [Bacillus sp. B14905]
Length=519

 Score = 34.3 bits (77),  Expect = 5.9, Method: Composition-based stats.
 Identities = 13/59 (23%), Positives = 29/59 (50%), Gaps = 0/59 (0%)

Query  34   LANGSMSEVMMSEIAGLPIPPIIHYGAIAYAPSGASGKAWHQRTPARAEQVALEKCGDK  92
            L+N S+ E+  ++++ +  P ++   +  Y         WHQ T +R  Q+ + +  D+
Sbjct  447  LSNQSLLEIRDTDLSAVKAPAVVQENSQLYVQKHVQTTTWHQDTTSRVSQIEMVQTNDE  505


>gi|170079327|ref|YP_001735965.1| serine/threonine-protein kinase [Synechococcus sp. PCC 7002]
 gi|169886996|gb|ACB00710.1| serine/threonine-protein kinase [Synechococcus sp. PCC 7002]
Length=538

 Score = 34.3 bits (77),  Expect = 6.2, Method: Composition-based stats.
 Identities = 26/81 (33%), Positives = 38/81 (47%), Gaps = 6/81 (7%)

Query  56   IHYGAIAYA-PSGASGKAWHQRTPARAEQVALEKC----GDKTCKVVSRF-TRCGAVAYN  109
            + +GAIA++  +G  G      T A AEQ A+E C        C+ +  F   CGA+A  
Sbjct  439  VFFGAIAFSEATGEYGYVIDVPTQAEAEQAAVEDCEFFAASGDCQALVWFRNACGAIAMG  498

Query  110  GSKYQGGTGLTRRAAEDDAVN  130
               Y  G G    +AE  A++
Sbjct  499  PEAYGSGWGADIESAEAAALD  519


>gi|241205439|ref|YP_002976535.1| hypothetical protein Rleg_2733 [Rhizobium leguminosarum bv. trifolii 
WSM1325]
 gi|240859329|gb|ACS56996.1| hypothetical protein Rleg_2733 [Rhizobium leguminosarum bv. trifolii 
WSM1325]
Length=120

 Score = 33.9 bits (76),  Expect = 7.3, Method: Compositional matrix adjust.
 Identities = 35/113 (31%), Positives = 53/113 (47%), Gaps = 11/113 (9%)

Query  40   SEVMMSEIAGLPIPPIIHYGAIAYAPS-GASGKAWHQRTPARAEQVALEKCGD--KTCKV  96
            S  +++ +AG  +     YGAIAY+PS  A G ++       AE VA   C      C++
Sbjct  7    SFAVLTSLAGAALADT--YGAIAYSPSTSAIGWSYAHANRGDAETVARRNCDSSANDCRI  64

Query  97   VSRFTR-CGAVAY-NGSKYQGGTGLTRRAAEDDAVN--RLEGG--RIVNWACN  143
               F   CGAVA  + S +  G G   R A+  A+   R + G   ++ W C+
Sbjct  65   AIWFRNGCGAVAVGHRSGWGSGWGYDGREAQRQAIRSCRKQTGSCHVIRWQCS  117



Lambda     K      H
   0.319    0.133    0.404 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 129250525032


  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
    Posted date:  Sep 5, 2011  4:36 AM
  Number of letters in database: 5,219,829,388
  Number of sequences in database:  15,229,318



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40