BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv1815
Length=221
Score E
Sequences producing significant alignments: (Bits) Value
gi|15608952|ref|NP_216331.1| hypothetical protein Rv1815 [Mycoba... 446 1e-123
gi|15841285|ref|NP_336322.1| hypothetical protein MT1863 [Mycoba... 444 5e-123
gi|340626824|ref|YP_004745276.1| hypothetical protein MCAN_18311... 442 1e-122
gi|289761965|ref|ZP_06521343.1| conserved hypothetical protein [... 442 2e-122
gi|298525310|ref|ZP_07012719.1| conserved hypothetical protein [... 407 6e-112
gi|254775377|ref|ZP_05216893.1| hypothetical protein MaviaA2_120... 311 3e-83
gi|41407624|ref|NP_960460.1| hypothetical protein MAP1526 [Mycob... 310 1e-82
gi|118466277|ref|YP_882087.1| hypothetical protein MAV_2901 [Myc... 310 1e-82
gi|296164799|ref|ZP_06847359.1| conserved hypothetical protein [... 304 6e-81
gi|240173101|ref|ZP_04751759.1| hypothetical protein MkanA1_2756... 300 8e-80
gi|254823253|ref|ZP_05228254.1| hypothetical protein MintA_25209... 299 2e-79
gi|342861286|ref|ZP_08717934.1| hypothetical protein MCOL_20481 ... 297 6e-79
gi|183982699|ref|YP_001850990.1| hypothetical protein MMAR_2692 ... 285 3e-75
gi|333990552|ref|YP_004523166.1| hypothetical protein JDM601_191... 275 3e-72
gi|339294751|gb|AEJ46862.1| hypothetical protein CCDC5079_1672 [... 261 4e-68
gi|145224002|ref|YP_001134680.1| hypothetical protein Mflv_3416 ... 226 2e-57
gi|315444334|ref|YP_004077213.1| hypothetical protein Mspyr1_274... 224 8e-57
gi|120404148|ref|YP_953977.1| hypothetical protein Mvan_3169 [My... 222 3e-56
gi|108799826|ref|YP_640023.1| hypothetical protein Mmcs_2860 [My... 222 4e-56
gi|118467948|ref|YP_887964.1| hypothetical protein MSMEG_3661 [M... 221 6e-56
gi|126435469|ref|YP_001071160.1| hypothetical protein Mjls_2890 ... 219 2e-55
gi|342858143|ref|ZP_08714798.1| hypothetical protein MCOL_04696 ... 159 3e-37
gi|169629889|ref|YP_001703538.1| hypothetical protein MAB_2805c ... 159 4e-37
gi|296171240|ref|ZP_06852644.1| conserved hypothetical protein [... 152 3e-35
gi|41409165|ref|NP_962001.1| hypothetical protein MAP3067c [Myco... 140 1e-31
gi|254776303|ref|ZP_05217819.1| hypothetical protein MaviaA2_167... 140 1e-31
gi|118467182|ref|YP_883044.1| hypothetical protein MAV_3882 [Myc... 139 3e-31
gi|240169579|ref|ZP_04748238.1| hypothetical protein MkanA1_0971... 139 4e-31
gi|169630429|ref|YP_001704078.1| hypothetical protein MAB_3348 [... 133 2e-29
gi|169630430|ref|YP_001704079.1| hypothetical protein MAB_3349 [... 133 2e-29
gi|145226120|ref|YP_001136774.1| hypothetical protein Mflv_5525 ... 132 5e-29
gi|118617513|ref|YP_905845.1| hypothetical protein MUL_1916 [Myc... 120 2e-25
gi|183981692|ref|YP_001849983.1| hypothetical protein MMAR_1678 ... 119 3e-25
gi|169630428|ref|YP_001704077.1| hypothetical protein MAB_3347 [... 116 2e-24
gi|68536652|ref|YP_251357.1| putative secreted protein [Coryneba... 63.5 2e-08
gi|260577852|ref|ZP_05845785.1| secreted protein [Corynebacteriu... 63.5 2e-08
gi|240171161|ref|ZP_04749820.1| hypothetical protein MkanA1_1775... 60.5 2e-07
gi|213966288|ref|ZP_03394471.1| putative secreted protein [Coryn... 55.5 5e-06
gi|296141120|ref|YP_003648363.1| hypothetical protein Tpau_3440 ... 54.7 1e-05
gi|19552017|ref|NP_600019.1| hypothetical protein NCgl0757 [Cory... 54.3 1e-05
gi|344043708|gb|EGV39396.1| hypothetical protein CgS9114_13056 [... 54.3 1e-05
gi|145294954|ref|YP_001137775.1| hypothetical protein cgR_0900 [... 54.3 1e-05
gi|296139058|ref|YP_003646301.1| hypothetical protein Tpau_1333 ... 53.5 2e-05
gi|296164350|ref|ZP_06846933.1| conserved hypothetical protein [... 53.5 2e-05
gi|9507331|ref|NP_040426.1| hypothetical protein pAL5000p3 [Plas... 52.4 5e-05
gi|312139009|ref|YP_004006345.1| hypothetical protein REQ_15830 ... 51.6 8e-05
gi|296166510|ref|ZP_06848941.1| conserved hypothetical protein [... 51.6 8e-05
gi|306835534|ref|ZP_07468548.1| secreted protein [Corynebacteriu... 51.6 8e-05
gi|227502933|ref|ZP_03932982.1| conserved hypothetical protein [... 51.6 9e-05
gi|336326238|ref|YP_004606204.1| hypothetical protein CRES_1688 ... 51.6 9e-05
>gi|15608952|ref|NP_216331.1| hypothetical protein Rv1815 [Mycobacterium tuberculosis H37Rv]
gi|6136491|sp|Q50618.2|Y1815_MYCTU RecName: Full=Uncharacterized protein Rv1815/MT1863; Flags: Precursor
gi|3261626|emb|CAB01480.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium tuberculosis H37Rv]
Length=221
Score = 446 bits (1146), Expect = 1e-123, Method: Compositional matrix adjust.
Identities = 220/221 (99%), Positives = 221/221 (100%), Gaps = 0/221 (0%)
Query 1 VVRLVPRAFAATVALLAAGFSPATASADPVLVFPGMEIRQDNHVCTLGYVDPALKIAFTA 60
+VRLVPRAFAATVALLAAGFSPATASADPVLVFPGMEIRQDNHVCTLGYVDPALKIAFTA
Sbjct 1 MVRLVPRAFAATVALLAAGFSPATASADPVLVFPGMEIRQDNHVCTLGYVDPALKIAFTA 60
Query 61 GHCRGGGAVTSRDYKVIGHLRAIRDNTPSGSTVATHELIADYEAIVLADDVTASNILPSG 120
GHCRGGGAVTSRDYKVIGHLRAIRDNTPSGSTVATHELIADYEAIVLADDVTASNILPSG
Sbjct 61 GHCRGGGAVTSRDYKVIGHLRAIRDNTPSGSTVATHELIADYEAIVLADDVTASNILPSG 120
Query 121 RALESRPGVVLHPGQAVCHFGVSTGETCGTVESVNNGWFTMSHGVLSEKGDSGGPVYLAP 180
RALESRPGVVLHPGQAVCHFGVSTGETCGTVESVNNGWFTMSHGVLSEKGDSGGPVYLAP
Sbjct 121 RALESRPGVVLHPGQAVCHFGVSTGETCGTVESVNNGWFTMSHGVLSEKGDSGGPVYLAP 180
Query 181 DGGPAQIVGIFNSVWGGFPAAVSWRSTSEQVHADLGVTPLA 221
DGGPAQIVGIFNSVWGGFPAAVSWRSTSEQVHADLGVTPLA
Sbjct 181 DGGPAQIVGIFNSVWGGFPAAVSWRSTSEQVHADLGVTPLA 221
>gi|15841285|ref|NP_336322.1| hypothetical protein MT1863 [Mycobacterium tuberculosis CDC1551]
gi|31793004|ref|NP_855497.1| hypothetical protein Mb1845 [Mycobacterium bovis AF2122/97]
gi|121637717|ref|YP_977940.1| hypothetical protein BCG_1849 [Mycobacterium bovis BCG str. Pasteur
1173P2]
71 more sequence titles
Length=221
Score = 444 bits (1142), Expect = 5e-123, Method: Compositional matrix adjust.
Identities = 219/221 (99%), Positives = 220/221 (99%), Gaps = 0/221 (0%)
Query 1 VVRLVPRAFAATVALLAAGFSPATASADPVLVFPGMEIRQDNHVCTLGYVDPALKIAFTA 60
+VRLVPRAFAATVALLAAGFSPATASADPVLVFPGMEIRQDNHVCTLGYVDPALKIAFTA
Sbjct 1 MVRLVPRAFAATVALLAAGFSPATASADPVLVFPGMEIRQDNHVCTLGYVDPALKIAFTA 60
Query 61 GHCRGGGAVTSRDYKVIGHLRAIRDNTPSGSTVATHELIADYEAIVLADDVTASNILPSG 120
GHCRGGGAVTSRDYKVIGHLRA RDNTPSGSTVATHELIADYEAIVLADDVTASNILPSG
Sbjct 61 GHCRGGGAVTSRDYKVIGHLRAFRDNTPSGSTVATHELIADYEAIVLADDVTASNILPSG 120
Query 121 RALESRPGVVLHPGQAVCHFGVSTGETCGTVESVNNGWFTMSHGVLSEKGDSGGPVYLAP 180
RALESRPGVVLHPGQAVCHFGVSTGETCGTVESVNNGWFTMSHGVLSEKGDSGGPVYLAP
Sbjct 121 RALESRPGVVLHPGQAVCHFGVSTGETCGTVESVNNGWFTMSHGVLSEKGDSGGPVYLAP 180
Query 181 DGGPAQIVGIFNSVWGGFPAAVSWRSTSEQVHADLGVTPLA 221
DGGPAQIVGIFNSVWGGFPAAVSWRSTSEQVHADLGVTPLA
Sbjct 181 DGGPAQIVGIFNSVWGGFPAAVSWRSTSEQVHADLGVTPLA 221
>gi|340626824|ref|YP_004745276.1| hypothetical protein MCAN_18311 [Mycobacterium canettii CIPT
140010059]
gi|340005014|emb|CCC44163.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059]
Length=221
Score = 442 bits (1137), Expect = 1e-122, Method: Compositional matrix adjust.
Identities = 218/221 (99%), Positives = 220/221 (99%), Gaps = 0/221 (0%)
Query 1 VVRLVPRAFAATVALLAAGFSPATASADPVLVFPGMEIRQDNHVCTLGYVDPALKIAFTA 60
+VRLVPRAFAATVALLAAGFSPATASADPVLVFPGMEIRQDNHVCTLGYVDPALKIAFTA
Sbjct 1 MVRLVPRAFAATVALLAAGFSPATASADPVLVFPGMEIRQDNHVCTLGYVDPALKIAFTA 60
Query 61 GHCRGGGAVTSRDYKVIGHLRAIRDNTPSGSTVATHELIADYEAIVLADDVTASNILPSG 120
GHCRGGGAVTSRDYKVIGHLRA RDNTPSGSTVATHELIADYEAIVLADDVTASNILPSG
Sbjct 61 GHCRGGGAVTSRDYKVIGHLRAFRDNTPSGSTVATHELIADYEAIVLADDVTASNILPSG 120
Query 121 RALESRPGVVLHPGQAVCHFGVSTGETCGTVESVNNGWFTMSHGVLSEKGDSGGPVYLAP 180
RALESRPGVV+HPGQAVCHFGVSTGETCGTVESVNNGWFTMSHGVLSEKGDSGGPVYLAP
Sbjct 121 RALESRPGVVVHPGQAVCHFGVSTGETCGTVESVNNGWFTMSHGVLSEKGDSGGPVYLAP 180
Query 181 DGGPAQIVGIFNSVWGGFPAAVSWRSTSEQVHADLGVTPLA 221
DGGPAQIVGIFNSVWGGFPAAVSWRSTSEQVHADLGVTPLA
Sbjct 181 DGGPAQIVGIFNSVWGGFPAAVSWRSTSEQVHADLGVTPLA 221
>gi|289761965|ref|ZP_06521343.1| conserved hypothetical protein [Mycobacterium tuberculosis GM
1503]
gi|289709471|gb|EFD73487.1| conserved hypothetical protein [Mycobacterium tuberculosis GM
1503]
Length=221
Score = 442 bits (1136), Expect = 2e-122, Method: Compositional matrix adjust.
Identities = 218/221 (99%), Positives = 219/221 (99%), Gaps = 0/221 (0%)
Query 1 VVRLVPRAFAATVALLAAGFSPATASADPVLVFPGMEIRQDNHVCTLGYVDPALKIAFTA 60
+VRLVPRAFAATVALLAAGFSPATASADPVLVFPGMEIRQDNHVCTLGYVDPALKIAFTA
Sbjct 1 MVRLVPRAFAATVALLAAGFSPATASADPVLVFPGMEIRQDNHVCTLGYVDPALKIAFTA 60
Query 61 GHCRGGGAVTSRDYKVIGHLRAIRDNTPSGSTVATHELIADYEAIVLADDVTASNILPSG 120
GHCRGGGAVTSRDYKVIGHLRA RDNTPSGSTVATHELIADYEAIVLADDVTASNILPSG
Sbjct 61 GHCRGGGAVTSRDYKVIGHLRAFRDNTPSGSTVATHELIADYEAIVLADDVTASNILPSG 120
Query 121 RALESRPGVVLHPGQAVCHFGVSTGETCGTVESVNNGWFTMSHGVLSEKGDSGGPVYLAP 180
RALESRPGVVLHPGQAVCHFGVSTGETCGTVE VNNGWFTMSHGVLSEKGDSGGPVYLAP
Sbjct 121 RALESRPGVVLHPGQAVCHFGVSTGETCGTVERVNNGWFTMSHGVLSEKGDSGGPVYLAP 180
Query 181 DGGPAQIVGIFNSVWGGFPAAVSWRSTSEQVHADLGVTPLA 221
DGGPAQIVGIFNSVWGGFPAAVSWRSTSEQVHADLGVTPLA
Sbjct 181 DGGPAQIVGIFNSVWGGFPAAVSWRSTSEQVHADLGVTPLA 221
>gi|298525310|ref|ZP_07012719.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
gi|298495104|gb|EFI30398.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
Length=203
Score = 407 bits (1046), Expect = 6e-112, Method: Compositional matrix adjust.
Identities = 201/203 (99%), Positives = 202/203 (99%), Gaps = 0/203 (0%)
Query 1 VVRLVPRAFAATVALLAAGFSPATASADPVLVFPGMEIRQDNHVCTLGYVDPALKIAFTA 60
+VRLVPRAFAATVALLAAGFSPATASADPVLVFPGMEIRQDNHVCTLGYVDPALKIAFTA
Sbjct 1 MVRLVPRAFAATVALLAAGFSPATASADPVLVFPGMEIRQDNHVCTLGYVDPALKIAFTA 60
Query 61 GHCRGGGAVTSRDYKVIGHLRAIRDNTPSGSTVATHELIADYEAIVLADDVTASNILPSG 120
GHCRGGGAVTSRDYKVIGHLRA RDNTPSGSTVATHELIADYEAIVLADDVTASNILPSG
Sbjct 61 GHCRGGGAVTSRDYKVIGHLRAFRDNTPSGSTVATHELIADYEAIVLADDVTASNILPSG 120
Query 121 RALESRPGVVLHPGQAVCHFGVSTGETCGTVESVNNGWFTMSHGVLSEKGDSGGPVYLAP 180
RALESRPGVVLHPGQAVCHFGVSTGETCGTVESVNNGWFTMSHGVLSEKGDSGGPVYLAP
Sbjct 121 RALESRPGVVLHPGQAVCHFGVSTGETCGTVESVNNGWFTMSHGVLSEKGDSGGPVYLAP 180
Query 181 DGGPAQIVGIFNSVWGGFPAAVS 203
DGGPAQIVGIFNSVWGGFPAAVS
Sbjct 181 DGGPAQIVGIFNSVWGGFPAAVS 203
>gi|254775377|ref|ZP_05216893.1| hypothetical protein MaviaA2_12001 [Mycobacterium avium subsp.
avium ATCC 25291]
Length=225
Score = 311 bits (798), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 158/219 (73%), Positives = 177/219 (81%), Gaps = 2/219 (0%)
Query 1 VVRLVPRAFAATVALLA-AGFSPATASADPVLVFPGMEIRQDNHVCTLGYVDPALKIAFT 59
V RL RAFAA++ + A AG PA+A+ V+V+PGMEIRQDN VCTLGYVDP LKIAFT
Sbjct 2 VHRLATRAFAASITVTALAGTLPASAAKADVMVYPGMEIRQDNRVCTLGYVDPGLKIAFT 61
Query 60 AGHCRGGGAV-TSRDYKVIGHLRAIRDNTPSGSTVATHELIADYEAIVLADDVTASNILP 118
AGHCRGGG V T R VIG + A RDNTPSG+TV+T ++I DYEAIVL + VTA+NILP
Sbjct 62 AGHCRGGGGVVTDRGGTVIGRMAAFRDNTPSGTTVSTSQVINDYEAIVLDNGVTANNILP 121
Query 119 SGRALESRPGVVLHPGQAVCHFGVSTGETCGTVESVNNGWFTMSHGVLSEKGDSGGPVYL 178
GR L S PG+ L PGQ VCHFGV TGETCGTVESVNNGWFTMSHGV S GDSGGPVYL
Sbjct 122 GGRPLVSDPGLALTPGQPVCHFGVITGETCGTVESVNNGWFTMSHGVQSHNGDSGGPVYL 181
Query 179 APDGGPAQIVGIFNSVWGGFPAAVSWRSTSEQVHADLGV 217
AP GGP QIVGIFNSVWG +PAAVSW++TSE+V DLGV
Sbjct 182 APSGGPGQIVGIFNSVWGEYPAAVSWQATSEEVREDLGV 220
>gi|41407624|ref|NP_960460.1| hypothetical protein MAP1526 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41395977|gb|AAS03843.1| hypothetical protein MAP_1526 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|336457576|gb|EGO36581.1| hypothetical protein MAPs_21330 [Mycobacterium avium subsp. paratuberculosis
S397]
Length=225
Score = 310 bits (793), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 157/219 (72%), Positives = 176/219 (81%), Gaps = 2/219 (0%)
Query 1 VVRLVPRAFAATVALLA-AGFSPATASADPVLVFPGMEIRQDNHVCTLGYVDPALKIAFT 59
V RL RAFAA++ + A A PA+A+ V+V+PGMEIRQDN VCTLGYVDP LKIAFT
Sbjct 2 VHRLATRAFAASITVTALAATLPASAAKADVMVYPGMEIRQDNRVCTLGYVDPGLKIAFT 61
Query 60 AGHCRGGGAV-TSRDYKVIGHLRAIRDNTPSGSTVATHELIADYEAIVLADDVTASNILP 118
AGHCRGGG V T R VIG + A RDNTPSG+TV+T ++I DYEAIVL + VTA+NILP
Sbjct 62 AGHCRGGGGVVTDRGGTVIGRMAAFRDNTPSGTTVSTSQVINDYEAIVLDNGVTANNILP 121
Query 119 SGRALESRPGVVLHPGQAVCHFGVSTGETCGTVESVNNGWFTMSHGVLSEKGDSGGPVYL 178
GR L S PG+ L PGQ VCHFGV TGETCGTVESVNNGWFTMSHGV S GDSGGPVYL
Sbjct 122 GGRPLVSDPGLALTPGQPVCHFGVITGETCGTVESVNNGWFTMSHGVQSHNGDSGGPVYL 181
Query 179 APDGGPAQIVGIFNSVWGGFPAAVSWRSTSEQVHADLGV 217
AP GGP QIVGIFNSVWG +PAAVSW++TSE+V DLGV
Sbjct 182 APSGGPGQIVGIFNSVWGEYPAAVSWQATSEEVREDLGV 220
>gi|118466277|ref|YP_882087.1| hypothetical protein MAV_2901 [Mycobacterium avium 104]
gi|118167564|gb|ABK68461.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=224
Score = 310 bits (793), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 156/217 (72%), Positives = 175/217 (81%), Gaps = 2/217 (0%)
Query 3 RLVPRAFAATVALLA-AGFSPATASADPVLVFPGMEIRQDNHVCTLGYVDPALKIAFTAG 61
RL RAFAA++ + A A PA+A+ V+V+PGMEIRQDN VCTLGYVDP LKIAFTAG
Sbjct 3 RLATRAFAASITVTALAATLPASAAKADVMVYPGMEIRQDNRVCTLGYVDPGLKIAFTAG 62
Query 62 HCRGGGAV-TSRDYKVIGHLRAIRDNTPSGSTVATHELIADYEAIVLADDVTASNILPSG 120
HCRGGG V T R VIG + A RDNTPSG+TV+T ++I DYEAIVL + VTA+NILP G
Sbjct 63 HCRGGGGVVTDRGGTVIGRMAAFRDNTPSGTTVSTSQVINDYEAIVLDNGVTANNILPGG 122
Query 121 RALESRPGVVLHPGQAVCHFGVSTGETCGTVESVNNGWFTMSHGVLSEKGDSGGPVYLAP 180
R L S PG+ L PGQ VCHFGV TGETCGTVESVNNGWFTMSHGV S GDSGGPVYLAP
Sbjct 123 RPLVSDPGLALTPGQPVCHFGVITGETCGTVESVNNGWFTMSHGVQSHNGDSGGPVYLAP 182
Query 181 DGGPAQIVGIFNSVWGGFPAAVSWRSTSEQVHADLGV 217
GGP QIVGIFNSVWG +PAAVSW++TSE+V DLGV
Sbjct 183 SGGPGQIVGIFNSVWGEYPAAVSWQATSEEVREDLGV 219
>gi|296164799|ref|ZP_06847359.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295899853|gb|EFG79299.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=226
Score = 304 bits (778), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 157/224 (71%), Positives = 170/224 (76%), Gaps = 3/224 (1%)
Query 1 VVRLVPRAFAA--TVALLAAGFSPATASADPVLVFPGMEIRQDNHVCTLGYVDPALKIAF 58
V RL RAF A TVA LA P A ADPV+V+PGMEI Q N VCTLGYVDP +KIAF
Sbjct 2 VRRLAIRAFIASITVAALAQSLPPVPAHADPVMVYPGMEIHQGNRVCTLGYVDPGMKIAF 61
Query 59 TAGHCRGG-GAVTSRDYKVIGHLRAIRDNTPSGSTVATHELIADYEAIVLADDVTASNIL 117
TAGHCRGG G VT R VIG L A RDNTPSG+TVAT +LI DYEAIVL + V A+N+L
Sbjct 62 TAGHCRGGEGVVTDRGGAVIGRLAAFRDNTPSGTTVATDQLITDYEAIVLDNGVMANNVL 121
Query 118 PSGRALESRPGVVLHPGQAVCHFGVSTGETCGTVESVNNGWFTMSHGVLSEKGDSGGPVY 177
P GR L S P L PGQA+CHFGVSTGETCGTVESVNNGWFTMSHGV S GDSGGPVY
Sbjct 122 PGGRQLISNPAAALAPGQAICHFGVSTGETCGTVESVNNGWFTMSHGVQSHNGDSGGPVY 181
Query 178 LAPDGGPAQIVGIFNSVWGGFPAAVSWRSTSEQVHADLGVTPLA 221
L GP +VGIFNSVWG FPAAVSWR+TSE+V DLGV +A
Sbjct 182 LPSSAGPGLLVGIFNSVWGEFPAAVSWRATSEEVREDLGVARVA 225
>gi|240173101|ref|ZP_04751759.1| hypothetical protein MkanA1_27561 [Mycobacterium kansasii ATCC
12478]
Length=222
Score = 300 bits (769), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 152/219 (70%), Positives = 174/219 (80%), Gaps = 4/219 (1%)
Query 1 VVRLVPRAFA--ATVALLAAGFSPATASADPVLVFPGMEIRQDNHVCTLGYVDPALKIAF 58
V RL RAFA ATVA LA +PA A A+P LVFPGMEI QD H+CTL YVD L++AF
Sbjct 2 VRRLALRAFAVSATVAALACELAPA-AYAEPPLVFPGMEIHQDIHICTLAYVDAKLRMAF 60
Query 59 TAGHCRGGGAVTSRDYKVIGHLRAIRDNTPSGSTVATHELIADYEAIVLADDVTASNILP 118
+AGHCRG GAV+ RD VIGHLRA RDNTPSGSTVAT + I DYEAI L D V S++LP
Sbjct 61 SAGHCRGEGAVSDRDNNVIGHLRAFRDNTPSGSTVATDQSIDDYEAIALVDGVRVSDVLP 120
Query 119 SGRALESRPGVVLHPGQAVCHFGVSTGETCGTVESVNNGWFTMSHGVLSEKGDSGGPVYL 178
GR L SRPGVV PGQAVCHFG+STGETCGTV+SVNNGWFTM+ GV S+KGDSGGPVYL
Sbjct 121 GGRQLTSRPGVVAQPGQAVCHFGISTGETCGTVDSVNNGWFTMTGGVASQKGDSGGPVYL 180
Query 179 APDGGPAQIVGIFNSVWGGFPAAVSWRSTSEQVHADLGV 217
+ GP Q++GIFNSVWG +PAAVSW++ S+Q+ DLGV
Sbjct 181 IGN-GPGQLIGIFNSVWGQYPAAVSWQAASDQLRQDLGV 218
>gi|254823253|ref|ZP_05228254.1| hypothetical protein MintA_25209 [Mycobacterium intracellulare
ATCC 13950]
Length=225
Score = 299 bits (766), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 160/219 (74%), Positives = 177/219 (81%), Gaps = 4/219 (1%)
Query 1 VVRLVPRAFAA--TVALLAAGFSPATASADPVLVFPGMEIRQDNHVCTLGYVDPALKIAF 58
V RL RAFAA TVA LA+ A A AD VLV+PGMEIRQDN VCTLGYVDPALK+AF
Sbjct 2 VHRLATRAFAASVTVAALASLLPAAPAKAD-VLVYPGMEIRQDNRVCTLGYVDPALKVAF 60
Query 59 TAGHCRGGGAV-TSRDYKVIGHLRAIRDNTPSGSTVATHELIADYEAIVLADDVTASNIL 117
TAGHCRGGG V T R VIG L A RDNTPSG+TV+T ++I DYEAIVL +DVTA+NIL
Sbjct 61 TAGHCRGGGGVVTDRGGTVIGRLAAFRDNTPSGTTVSTSQVINDYEAIVLDNDVTANNIL 120
Query 118 PSGRALESRPGVVLHPGQAVCHFGVSTGETCGTVESVNNGWFTMSHGVLSEKGDSGGPVY 177
PSGR L S PG+ L PGQ +CH+GV TGETCGTV+SVNNGWFTMS+GV S GDSGGPVY
Sbjct 121 PSGRPLVSDPGLSLAPGQPICHYGVITGETCGTVQSVNNGWFTMSNGVQSHNGDSGGPVY 180
Query 178 LAPDGGPAQIVGIFNSVWGGFPAAVSWRSTSEQVHADLG 216
LAP GGP Q+VGIFNSVWG FPAAVSW +TS+QV DLG
Sbjct 181 LAPGGGPGQLVGIFNSVWGDFPAAVSWGATSQQVREDLG 219
>gi|342861286|ref|ZP_08717934.1| hypothetical protein MCOL_20481 [Mycobacterium colombiense CECT
3035]
gi|342131186|gb|EGT84467.1| hypothetical protein MCOL_20481 [Mycobacterium colombiense CECT
3035]
Length=226
Score = 297 bits (761), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 157/220 (72%), Positives = 174/220 (80%), Gaps = 3/220 (1%)
Query 1 VVRLVPRAFAATVALLAAG-FSPATASADPVLVFPGMEIRQDNHVCTLGYVDPALKIAFT 59
V RL R FAA+ A++A F PA + V+V+PGMEIRQDN VCTLGYVDP LKIAFT
Sbjct 2 VHRLATRTFAASAAVVALSSFVPAAPAKADVVVYPGMEIRQDNRVCTLGYVDPGLKIAFT 61
Query 60 AGHCRGGGA--VTSRDYKVIGHLRAIRDNTPSGSTVATHELIADYEAIVLADDVTASNIL 117
AGHCRGGG+ VT R VIG + A RDNTPSG+TV+T ++I DYEAIVL + VTA+NIL
Sbjct 62 AGHCRGGGSGVVTDRGGAVIGRMAAFRDNTPSGTTVSTSQVINDYEAIVLDNSVTANNIL 121
Query 118 PSGRALESRPGVVLHPGQAVCHFGVSTGETCGTVESVNNGWFTMSHGVLSEKGDSGGPVY 177
P GR L S PG+ L PGQ VCHFGV TGETCGTVESVNNGWFTMSHGV S GDSGGPVY
Sbjct 122 PGGRPLVSDPGLTLAPGQPVCHFGVITGETCGTVESVNNGWFTMSHGVQSHNGDSGGPVY 181
Query 178 LAPDGGPAQIVGIFNSVWGGFPAAVSWRSTSEQVHADLGV 217
LAP GGP QIVGIFNSVWG FPAAVSW +TSE+V DLGV
Sbjct 182 LAPSGGPGQIVGIFNSVWGDFPAAVSWGATSEEVREDLGV 221
>gi|183982699|ref|YP_001850990.1| hypothetical protein MMAR_2692 [Mycobacterium marinum M]
gi|183176025|gb|ACC41135.1| conserved hypothetical protein [Mycobacterium marinum M]
Length=222
Score = 285 bits (729), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 144/218 (67%), Positives = 166/218 (77%), Gaps = 2/218 (0%)
Query 1 VVRLVPRAFAAT-VALLAAGFSPATASADPVLVFPGMEIRQDNHVCTLGYVDPALKIAFT 59
V RL RAFA + A A A+P LVFPGMEI QDNHVCTL +VDPA+ +AFT
Sbjct 2 VRRLALRAFAVSATTAALAFAWAPAARAEPPLVFPGMEIHQDNHVCTLAWVDPAMHMAFT 61
Query 60 AGHCRGGGAVTSRDYKVIGHLRAIRDNTPSGSTVATHELIADYEAIVLADDVTASNILPS 119
AGHCRG G VT R +IG LRA RDNTPSG+TVAT + I DYEAI+L D V SNI+P
Sbjct 62 AGHCRGDGPVTDRGNAIIGQLRAFRDNTPSGTTVATDQTIEDYEAIMLVDGVRISNIMPG 121
Query 120 GRALESRPGVVLHPGQAVCHFGVSTGETCGTVESVNNGWFTMSHGVLSEKGDSGGPVYLA 179
GR L S PG+ L PGQAVCHFG++TGETCGTVESVNNGWFTM+ GV S++GDSGGPVYLA
Sbjct 122 GRPLTSTPGLALQPGQAVCHFGITTGETCGTVESVNNGWFTMTGGVESQRGDSGGPVYLA 181
Query 180 PDGGPAQIVGIFNSVWGGFPAAVSWRSTSEQVHADLGV 217
GP Q+VGIFNS+WG FPAAVSW+ TS+++ DLGV
Sbjct 182 -GAGPGQLVGIFNSIWGDFPAAVSWQRTSDEMRQDLGV 218
>gi|333990552|ref|YP_004523166.1| hypothetical protein JDM601_1912 [Mycobacterium sp. JDM601]
gi|333486520|gb|AEF35912.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=219
Score = 275 bits (704), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 141/217 (65%), Positives = 166/217 (77%), Gaps = 3/217 (1%)
Query 7 RAFAATVALLAAGFSPA--TASADPVLVFPGMEIRQDNHVCTLGYVDPALKIAFTAGHCR 64
R A VA+ A SPA TA AD VLVFPGMEI QD HVCTLGYVDP +++AFTAGHCR
Sbjct 2 RLLAVGVAVGATVASPAVGTARADRVLVFPGMEIHQDTHVCTLGYVDPVMRVAFTAGHCR 61
Query 65 GGGAVTSRDYKVIGHLRAIRDNTPSGSTVATHELIADYEAIVLADDVTASNILPSGRALE 124
G G VT R VIG L RDNTP+G+TV T ++IADYEAIVLADDV +++ILP G LE
Sbjct 62 GSGPVTDRAGNVIGTLATFRDNTPNGATVNTDQVIADYEAIVLADDVDSNDILPGGLRLE 121
Query 125 SRPGVVLHPGQAVCHFGVSTGETCGTVESVNNGWFTMSHGVLSEKGDSGGPVYLAPDGGP 184
+ P ++ PG VCHFG+ TGETCGTVE VNNGWFTM+HGV S++GDSGGPVY+ G
Sbjct 122 AGPDDIVAPGDPVCHFGIVTGETCGTVERVNNGWFTMTHGVQSQQGDSGGPVYVIRGPGS 181
Query 185 AQIVGIFNSVWGGFPAAVSWRSTSEQVHADLGV-TPL 220
A+IVG+FNSVWG +PAAVSW + S+QV D+GV TPL
Sbjct 182 ARIVGLFNSVWGQYPAAVSWPAISQQVREDVGVPTPL 218
>gi|339294751|gb|AEJ46862.1| hypothetical protein CCDC5079_1672 [Mycobacterium tuberculosis
CCDC5079]
Length=129
Score = 261 bits (668), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 128/129 (99%), Positives = 129/129 (100%), Gaps = 0/129 (0%)
Query 93 VATHELIADYEAIVLADDVTASNILPSGRALESRPGVVLHPGQAVCHFGVSTGETCGTVE 152
+ATHELIADYEAIVLADDVTASNILPSGRALESRPGVVLHPGQAVCHFGVSTGETCGTVE
Sbjct 1 MATHELIADYEAIVLADDVTASNILPSGRALESRPGVVLHPGQAVCHFGVSTGETCGTVE 60
Query 153 SVNNGWFTMSHGVLSEKGDSGGPVYLAPDGGPAQIVGIFNSVWGGFPAAVSWRSTSEQVH 212
SVNNGWFTMSHGVLSEKGDSGGPVYLAPDGGPAQIVGIFNSVWGGFPAAVSWRSTSEQVH
Sbjct 61 SVNNGWFTMSHGVLSEKGDSGGPVYLAPDGGPAQIVGIFNSVWGGFPAAVSWRSTSEQVH 120
Query 213 ADLGVTPLA 221
ADLGVTPLA
Sbjct 121 ADLGVTPLA 129
>gi|145224002|ref|YP_001134680.1| hypothetical protein Mflv_3416 [Mycobacterium gilvum PYR-GCK]
gi|145216488|gb|ABP45892.1| conserved hypothetical protein [Mycobacterium gilvum PYR-GCK]
Length=240
Score = 226 bits (575), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 114/213 (54%), Positives = 138/213 (65%), Gaps = 1/213 (0%)
Query 3 RLVPRAFAATVALLAAGFSPATASADP-VLVFPGMEIRQDNHVCTLGYVDPALKIAFTAG 61
RL+ LL A A P VLV PGMEI QD+ +CTLGYVDP +IA+TAG
Sbjct 12 RLLQLLMVLVAPLLVVTLGAPVAQAQPGVLVSPGMEIHQDSVLCTLGYVDPGTRIAYTAG 71
Query 62 HCRGGGAVTSRDYKVIGHLRAIRDNTPSGSTVATHELIADYEAIVLADDVTASNILPSGR 121
HCR G V+ + IG + RDNTP G TV T+ I D+E I L DV +N+LPSG+
Sbjct 72 HCRASGTVSDKFGTPIGTQGSFRDNTPDGMTVDTNHQITDWEVIHLNQDVVINNVLPSGK 131
Query 122 ALESRPGVVLHPGQAVCHFGVSTGETCGTVESVNNGWFTMSHGVLSEKGDSGGPVYLAPD 181
AL + P V+ G VCHFGV TGE+CGT+ESVNNGWFTM++GV+S KGDSGGPVY
Sbjct 132 ALVTDPSVLPVKGMPVCHFGVVTGESCGTIESVNNGWFTMANGVVSRKGDSGGPVYTPTP 191
Query 182 GGPAQIVGIFNSVWGGFPAAVSWRSTSEQVHAD 214
G ++G+FNS WG FPAA+SW S Q AD
Sbjct 192 DGRTVLIGLFNSTWGTFPAAISWEVASRQAQAD 224
>gi|315444334|ref|YP_004077213.1| hypothetical protein Mspyr1_27480 [Mycobacterium sp. Spyr1]
gi|315262637|gb|ADT99378.1| hypothetical protein Mspyr1_27480 [Mycobacterium sp. Spyr1]
Length=241
Score = 224 bits (570), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 113/213 (54%), Positives = 138/213 (65%), Gaps = 1/213 (0%)
Query 3 RLVPRAFAATVALLAAGFSPATASADP-VLVFPGMEIRQDNHVCTLGYVDPALKIAFTAG 61
RL+ LL A A P VLV PGMEI QD+ +CTLGYVDP +IA+TAG
Sbjct 12 RLLQLLMVLVAPLLVVTLGAPVAQAQPGVLVSPGMEIHQDSVLCTLGYVDPGTRIAYTAG 71
Query 62 HCRGGGAVTSRDYKVIGHLRAIRDNTPSGSTVATHELIADYEAIVLADDVTASNILPSGR 121
HCR G V+ + IG + RDNTP G TV T+ I D+E I L +V +N+LPSG+
Sbjct 72 HCRASGTVSDKFGTPIGTQGSFRDNTPDGMTVDTNHQITDWEVIHLNQNVVINNVLPSGK 131
Query 122 ALESRPGVVLHPGQAVCHFGVSTGETCGTVESVNNGWFTMSHGVLSEKGDSGGPVYLAPD 181
AL + P V+ G VCHFGV TGE+CGT+ESVNNGWFTM++GV+S KGDSGGPVY
Sbjct 132 ALVTDPSVLPVKGMPVCHFGVVTGESCGTIESVNNGWFTMANGVVSRKGDSGGPVYTPTP 191
Query 182 GGPAQIVGIFNSVWGGFPAAVSWRSTSEQVHAD 214
G ++G+FNS WG FPAA+SW S Q AD
Sbjct 192 DGRTVLIGLFNSTWGTFPAAISWEVASRQAQAD 224
>gi|120404148|ref|YP_953977.1| hypothetical protein Mvan_3169 [Mycobacterium vanbaalenii PYR-1]
gi|119956966|gb|ABM13971.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1]
Length=233
Score = 222 bits (565), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 112/213 (53%), Positives = 138/213 (65%), Gaps = 1/213 (0%)
Query 3 RLVPRAFAATVALLAAGFSPATASADP-VLVFPGMEIRQDNHVCTLGYVDPALKIAFTAG 61
R++ FA +LA A A P VLVFPGMEI QD +CTLGYVDP +I +TAG
Sbjct 8 RVLHLLFAVLAPVLALALQTVPAQAQPGVLVFPGMEIHQDTVLCTLGYVDPQTRIGYTAG 67
Query 62 HCRGGGAVTSRDYKVIGHLRAIRDNTPSGSTVATHELIADYEAIVLADDVTASNILPSGR 121
HCR G V+ + +IG RDNTP G TV T+ I D+E I LA V +N+LP G+
Sbjct 68 HCRASGTVSDKFGTMIGTQGTFRDNTPDGMTVDTNHQIIDWEVIHLAPHVAVNNVLPGGK 127
Query 122 ALESRPGVVLHPGQAVCHFGVSTGETCGTVESVNNGWFTMSHGVLSEKGDSGGPVYLAPD 181
L + P V+ G VCHFGV TGE+CGT+ESVNNGWFTM++GV+S KGDSGGPVY
Sbjct 128 VLVTDPAVLPVRGMPVCHFGVVTGESCGTIESVNNGWFTMANGVVSRKGDSGGPVYTPTP 187
Query 182 GGPAQIVGIFNSVWGGFPAAVSWRSTSEQVHAD 214
G +VG+FNS WG PAA+SW+ S+ AD
Sbjct 188 DGRTVLVGLFNSTWGTLPAAISWQVASQMAEAD 220
>gi|108799826|ref|YP_640023.1| hypothetical protein Mmcs_2860 [Mycobacterium sp. MCS]
gi|119868936|ref|YP_938888.1| hypothetical protein Mkms_2904 [Mycobacterium sp. KMS]
gi|108770245|gb|ABG08967.1| conserved hypothetical protein [Mycobacterium sp. MCS]
gi|119695025|gb|ABL92098.1| conserved hypothetical protein [Mycobacterium sp. KMS]
Length=224
Score = 222 bits (565), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 108/185 (59%), Positives = 137/185 (75%), Gaps = 1/185 (0%)
Query 27 ADP-VLVFPGMEIRQDNHVCTLGYVDPALKIAFTAGHCRGGGAVTSRDYKVIGHLRAIRD 85
ADP VLV PGMEIRQD ++CTLG+VD ++A+TAGHCRG G V+ R IG A D
Sbjct 28 ADPGVLVSPGMEIRQDTNLCTLGFVDVQQRVAYTAGHCRGSGPVSDRGGAFIGVQSAFED 87
Query 86 NTPSGSTVATHELIADYEAIVLADDVTASNILPSGRALESRPGVVLHPGQAVCHFGVSTG 145
NTP G+TV + I+D++ I LA +V +N+LPSGRAL P VV G VCHFGV TG
Sbjct 88 NTPDGTTVDVNHQISDWQTISLAPEVQVNNLLPSGRALVVDPSVVPTKGMPVCHFGVVTG 147
Query 146 ETCGTVESVNNGWFTMSHGVLSEKGDSGGPVYLAPDGGPAQIVGIFNSVWGGFPAAVSWR 205
E+CGT+E+VNNGWFTM++GV+S+KGDSGGPVY G A I+G+FNS WG FPAAVSW+
Sbjct 148 ESCGTIEAVNNGWFTMANGVVSKKGDSGGPVYFNAPDGRAVIIGMFNSTWGQFPAAVSWQ 207
Query 206 STSEQ 210
+ +++
Sbjct 208 AATQR 212
>gi|118467948|ref|YP_887964.1| hypothetical protein MSMEG_3661 [Mycobacterium smegmatis str.
MC2 155]
gi|118169235|gb|ABK70131.1| conserved hypothetical protein [Mycobacterium smegmatis str.
MC2 155]
Length=230
Score = 221 bits (563), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 111/200 (56%), Positives = 141/200 (71%), Gaps = 1/200 (0%)
Query 10 AATVALLAAGFSPATASADP-VLVFPGMEIRQDNHVCTLGYVDPALKIAFTAGHCRGGGA 68
A V + A S + ADP V VFPGMEIRQD+++CT+G++DP ++AFTAGHCRG G+
Sbjct 11 ALPVFFMMAALSAWPSHADPGVQVFPGMEIRQDSNLCTIGFIDPVARVAFTAGHCRGSGS 70
Query 69 VTSRDYKVIGHLRAIRDNTPSGSTVATHELIADYEAIVLADDVTASNILPSGRALESRPG 128
V R+ IG A DNTP+G+TV T+ +I+D+E I LA DV + LP+GR L P
Sbjct 71 VGDRNGNFIGMQAAFHDNTPNGATVDTNHVISDWETIQLAGDVGINPALPTGRILVEDPA 130
Query 129 VVLHPGQAVCHFGVSTGETCGTVESVNNGWFTMSHGVLSEKGDSGGPVYLAPDGGPAQIV 188
+ PG VCHFGV TGE+CGTVE+VNNGWFTM++GV+S +GDSGG VY G A I+
Sbjct 131 IGAAPGMPVCHFGVVTGESCGTVEAVNNGWFTMANGVVSARGDSGGSVYTVTPDGRAVIL 190
Query 189 GIFNSVWGGFPAAVSWRSTS 208
G+FNS WG +PAAVSW S S
Sbjct 191 GLFNSTWGQYPAAVSWPSVS 210
>gi|126435469|ref|YP_001071160.1| hypothetical protein Mjls_2890 [Mycobacterium sp. JLS]
gi|126235269|gb|ABN98669.1| conserved hypothetical protein [Mycobacterium sp. JLS]
Length=224
Score = 219 bits (559), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 107/185 (58%), Positives = 136/185 (74%), Gaps = 1/185 (0%)
Query 27 ADP-VLVFPGMEIRQDNHVCTLGYVDPALKIAFTAGHCRGGGAVTSRDYKVIGHLRAIRD 85
ADP VLV PGMEIRQD ++CTLG+VD ++A+TAGHCRG G V+ R IG A D
Sbjct 28 ADPGVLVSPGMEIRQDTNLCTLGFVDVQQRVAYTAGHCRGSGPVSDRGGAFIGVQSAFED 87
Query 86 NTPSGSTVATHELIADYEAIVLADDVTASNILPSGRALESRPGVVLHPGQAVCHFGVSTG 145
NTP G+TV + I+D++ I LA +V +N+LPSGR L P VV G VCHFGV TG
Sbjct 88 NTPDGTTVDVNHQISDWQTISLAPEVQVNNLLPSGRPLVVDPSVVPTKGMPVCHFGVVTG 147
Query 146 ETCGTVESVNNGWFTMSHGVLSEKGDSGGPVYLAPDGGPAQIVGIFNSVWGGFPAAVSWR 205
E+CGT+E+VNNGWFTM++GV+S+KGDSGGPVY G A I+G+FNS WG FPAAVSW+
Sbjct 148 ESCGTIEAVNNGWFTMANGVVSKKGDSGGPVYFNAPDGRAVIIGMFNSTWGQFPAAVSWQ 207
Query 206 STSEQ 210
+ +++
Sbjct 208 AATQR 212
>gi|342858143|ref|ZP_08714798.1| hypothetical protein MCOL_04696 [Mycobacterium colombiense CECT
3035]
gi|342133847|gb|EGT87027.1| hypothetical protein MCOL_04696 [Mycobacterium colombiense CECT
3035]
Length=244
Score = 159 bits (402), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 94/209 (45%), Positives = 119/209 (57%), Gaps = 6/209 (2%)
Query 8 AFAATVALLAAGFSPATASADP-VLVFPGMEIRQDNHVCTLGYVDPALKIAFTAGHCRGG 66
A AAT AA P A ADP VFPGMEIRQ N VC +G V+P L++A T+G C GG
Sbjct 14 ASAATTMFCAA---PGQAVADPGATVFPGMEIRQGNTVCMVGLVEPRLRVALTSGQCDGG 70
Query 67 G-AVTSRDYKVIGHLRAIRDNTPSGSTVATHELIADYEAIVLADDVTASNILPSGRALES 125
VT RD K IG++ R + ST T L +YE I +A +VTA+++LP+GR L S
Sbjct 71 QPVVTDRDRKPIGNVVLGRRQVDADSTADTSMLPVEYEVIAIAPEVTATDVLPTGRHLGS 130
Query 126 RPGVVLHPGQAVCHFGVSTGETCGTVESVNNGWFTMSHGVLSEKGDSGGPVYLAPDGGPA 185
PG PG VC +TG+ CGTV SV NG F ++ + S+ D GGPVY D A
Sbjct 131 VPGTRAQPGLPVCQLRTATGQRCGTVSSVGNGRFAITD-MASDSRDFGGPVYTLSDDNNA 189
Query 186 QIVGIFNSVWGGFPAAVSWRSTSEQVHAD 214
IVG+ W P SW++ QV+ D
Sbjct 190 VIVGLVEGTWRSSPQIESWQAVMAQVYID 218
>gi|169629889|ref|YP_001703538.1| hypothetical protein MAB_2805c [Mycobacterium abscessus ATCC
19977]
gi|169241856|emb|CAM62884.1| Conserved hypothetical protein [Mycobacterium abscessus]
Length=243
Score = 159 bits (401), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 82/194 (43%), Positives = 111/194 (58%), Gaps = 1/194 (0%)
Query 22 PATASADPVLVFPGMEIRQDNHVCTLGYVDPALKIAFTAGHCRGGGAVTSRDYKVIGHLR 81
PA +A ++ FPGM I Q + CTLGYVDP +I TAGHC G++ +G +
Sbjct 22 PAAETAPKIVAFPGMSIVQGDSRCTLGYVDPVSRIGLTAGHCNATGSIVDLAGNRLGEVL 81
Query 82 AIRDNTPSGSTVATHELIADYEAIVLADDVTASNILPSGRALESRPGVVLHPGQAVCHFG 141
+ N P+G + ++++DYE I V S+ LP+G AL G VC G
Sbjct 82 LMSRNLPTGGAIGPGDVVSDYEGISFGPGVELSSNLPNGLALRMAQNAGPELGLPVCLMG 141
Query 142 VSTGETCGTVESVNNGWFTMSHGVLSEKGDSGGPVYLAPDGGPAQIVGIFNSVWGGFPAA 201
+GETCG VE++NNGWFTM V + GDSGGPVY G A +VGI++ WGG PAA
Sbjct 142 SVSGETCGKVEAINNGWFTMVD-VAGQHGDSGGPVYTVTQPGQALLVGIYSLRWGGKPAA 200
Query 202 VSWRSTSEQVHADL 215
+SW + S Q+ + L
Sbjct 201 MSWSAISAQMQSQL 214
>gi|296171240|ref|ZP_06852644.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295894208|gb|EFG73965.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=241
Score = 152 bits (385), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 88/209 (43%), Positives = 118/209 (57%), Gaps = 4/209 (1%)
Query 8 AFAATVALLAAGFSPATASADP-VLVFPGMEIRQDNHVCTLGYVDPALKIAFTAGHC-RG 65
A A VA+LA G +P ASADP + VFPGMEIRQ VC +G V+P L++A T+G C G
Sbjct 12 AIAFAVAVLAVG-APGRASADPGITVFPGMEIRQGATVCMVGLVEPRLRVAITSGQCGSG 70
Query 66 GGAVTSRDYKVIGHLRAIRDNTPSGSTVATHELIADYEAIVLADDVTASNILPSGRALES 125
VT D +G + R + + +YE I L V AS++LP+GR L S
Sbjct 71 ESGVTDHDGNPVGTVVLARRQAADEAAAGEAMVPVEYEVIALGPGVIASDVLPTGRQLRS 130
Query 126 RPGVVLHPGQAVCHFGVSTGETCGTVESVNNGWFTMSHGVLSEKGDSGGPVYLAPDGGPA 185
PG+ PG VC F + G+ CG++ SV NG F ++ V + D GGPVY D A
Sbjct 131 APGLRAQPGLPVCQFRRAAGQRCGSISSVGNGRFIIAD-VAVDSRDFGGPVYALTDDNAA 189
Query 186 QIVGIFNSVWGGFPAAVSWRSTSEQVHAD 214
IVG+F +WG PA SW++ +QV+ D
Sbjct 190 VIVGLFEGMWGSAPAMESWQAVMQQVYID 218
>gi|41409165|ref|NP_962001.1| hypothetical protein MAP3067c [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41397985|gb|AAS05615.1| hypothetical protein MAP_3067c [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|336459155|gb|EGO38102.1| hypothetical protein MAPs_05930 [Mycobacterium avium subsp. paratuberculosis
S397]
Length=244
Score = 140 bits (353), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 88/209 (43%), Positives = 122/209 (59%), Gaps = 4/209 (1%)
Query 8 AFAATVALLAAGFSPATASADP-VLVFPGMEIRQDNHVCTLGYVDPALKIAFTAGHCRGG 66
A A+ +A++ +P A+ADP V PGMEI Q + VC +G V+P L++A T+G C GG
Sbjct 12 AGASALAVILLWAAPGHATADPAVTASPGMEIHQGHAVCMVGLVEPRLRVAITSGQCDGG 71
Query 67 -GAVTSRDYKVIGHLRAIRDNTPSGSTVATHELIADYEAIVLADDVTASNILPSGRALES 125
AVT RD+ IG + R + S A+ L +YE I LA DVTAS++LP+GR L +
Sbjct 72 QSAVTDRDHHPIGEVVLGRRQLDTDSADAS-TLPVEYEVIALARDVTASDLLPTGRRLLA 130
Query 126 RPGVVLHPGQAVCHFGVSTGETCGTVESVNNGWFTMSHGVLSEKGDSGGPVYLAPDGGPA 185
PG+ PG VC STG+ CG+V +V G F ++ V+ + D GGPVY D G A
Sbjct 131 APGLRAVPGLPVCQLRRSTGQHCGSVGTVTGGRFAIADMVVDGR-DVGGPVYALTDDGNA 189
Query 186 QIVGIFNSVWGGFPAAVSWRSTSEQVHAD 214
IVG+F + P SW++ QV+ D
Sbjct 190 VIVGLFEGMVRSSPQFESWQAVMAQVYVD 218
>gi|254776303|ref|ZP_05217819.1| hypothetical protein MaviaA2_16767 [Mycobacterium avium subsp.
avium ATCC 25291]
Length=244
Score = 140 bits (353), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 88/209 (43%), Positives = 122/209 (59%), Gaps = 4/209 (1%)
Query 8 AFAATVALLAAGFSPATASADP-VLVFPGMEIRQDNHVCTLGYVDPALKIAFTAGHCRGG 66
A A+ +A++ +P A+ADP V PGMEI Q + VC +G V+P L++A T+G C GG
Sbjct 12 AGASALAVILLWAAPGHATADPAVTASPGMEIHQGHAVCMVGLVEPRLRVAITSGQCDGG 71
Query 67 -GAVTSRDYKVIGHLRAIRDNTPSGSTVATHELIADYEAIVLADDVTASNILPSGRALES 125
AVT RD+ IG + R + S A+ L +YE I LA DVTAS++LP+GR L +
Sbjct 72 QSAVTDRDHHPIGEVVLGRRQLDTDSADAS-TLPVEYEVIALARDVTASDLLPTGRRLLA 130
Query 126 RPGVVLHPGQAVCHFGVSTGETCGTVESVNNGWFTMSHGVLSEKGDSGGPVYLAPDGGPA 185
PG+ PG VC STG+ CG+V +V G F ++ V+ + D GGPVY D G A
Sbjct 131 APGLRAVPGLPVCQLRRSTGQHCGSVGTVTGGRFAIADMVVDGR-DVGGPVYALTDDGNA 189
Query 186 QIVGIFNSVWGGFPAAVSWRSTSEQVHAD 214
IVG+F + P SW++ QV+ D
Sbjct 190 VIVGLFEGMVRSSPQFESWQAVMAQVYVD 218
>gi|118467182|ref|YP_883044.1| hypothetical protein MAV_3882 [Mycobacterium avium 104]
gi|118168469|gb|ABK69366.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=244
Score = 139 bits (350), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 88/209 (43%), Positives = 122/209 (59%), Gaps = 4/209 (1%)
Query 8 AFAATVALLAAGFSPATASADP-VLVFPGMEIRQDNHVCTLGYVDPALKIAFTAGHCRGG 66
A A+ +A++ +P A+ADP V PGMEI Q + VC +G V+P L++A T+G C GG
Sbjct 12 AGASALAVILLWAAPGHATADPAVTASPGMEIHQGHAVCMVGLVEPRLRVAITSGQCDGG 71
Query 67 -GAVTSRDYKVIGHLRAIRDNTPSGSTVATHELIADYEAIVLADDVTASNILPSGRALES 125
AVT RD+ IG + R + S A+ L +YE I LA DVTAS++LP+GR L +
Sbjct 72 QSAVTDRDHHPIGEVVLGRRQLDTDSADAS-TLPVEYEVIALARDVTASDLLPTGRRLLA 130
Query 126 RPGVVLHPGQAVCHFGVSTGETCGTVESVNNGWFTMSHGVLSEKGDSGGPVYLAPDGGPA 185
PG+ PG VC STG+ CG+V +V G F ++ V+ + D GGPVY D G A
Sbjct 131 APGLRAVPGLPVCQLRRSTGQHCGSVGTVIGGRFAIADMVVDGR-DVGGPVYALTDDGNA 189
Query 186 QIVGIFNSVWGGFPAAVSWRSTSEQVHAD 214
IVG+F + P SW++ QV+ D
Sbjct 190 VIVGLFEGMVRSSPQFESWQAVMAQVYVD 218
>gi|240169579|ref|ZP_04748238.1| hypothetical protein MkanA1_09717 [Mycobacterium kansasii ATCC
12478]
Length=234
Score = 139 bits (349), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 81/207 (40%), Positives = 113/207 (55%), Gaps = 1/207 (0%)
Query 8 AFAATVALLAAGFSPATASADPVLVFPGMEIRQDNHVCTLGYVDPALKIAFTAGHCRGGG 67
A A +AL+ A+ V VFPGMEI Q VCT+G+V+ L+IA +AG C G
Sbjct 12 AVAIAIALVVLTAPAPAAAKPGVTVFPGMEIHQGAMVCTVGFVETRLRIAVSAGRCDEGS 71
Query 68 AVTSRDYKVIGHLRAIRDNTPSGSTVATHELIADYEAIVLADDVTASNILPSGRALESRP 127
VT V+G + R T + A +YE I LA +V A +LPSGR L+S P
Sbjct 72 TVTDSKENVVGTVMLARRGTANEPAAADSAAGVEYEVITLAPEVIAIELLPSGRQLQSIP 131
Query 128 GVVLHPGQAVCHFGVSTGETCGTVESVNNGWFTMSHGVLSEKGDSGGPVYLAPDGGPAQI 187
G + P VCH G+S+G+ CG V SV+N F ++ G+ +++ D GGPVY D A I
Sbjct 132 GFGVQPALPVCHAGISSGQVCGRVSSVDNDGFAIA-GMTADQRDLGGPVYTLTDDNRAVI 190
Query 188 VGIFNSVWGGFPAAVSWRSTSEQVHAD 214
VG+ + G A SW++ Q++ D
Sbjct 191 VGLLDEARGSTLWAQSWQAVMRQLYID 217
>gi|169630429|ref|YP_001704078.1| hypothetical protein MAB_3348 [Mycobacterium abscessus ATCC 19977]
gi|169242396|emb|CAM63424.1| Conserved hypothetical protein [Mycobacterium abscessus]
Length=287
Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/206 (40%), Positives = 107/206 (52%), Gaps = 13/206 (6%)
Query 21 SPATASADPVLVFPGMEIRQ-----DNHVCTLGYVDPALKIAFTAGHCRGGGAVTSRDYK 75
+P A ADP L++PGMEI Q ++ CTLG+VDPA ++ TAGHC G G V + D
Sbjct 34 NPIAAHADP-LIYPGMEIIQRPPGKESLSCTLGFVDPAARVGVTAGHCGGNGPVFTSDGV 92
Query 76 VIGHLRAIRDNTPSGSTVATHELIADYEAIVLADDVTASNILPSGRALESRPGVVLHPGQ 135
IG L + N +A + DYE I D V +N+LP+G L P VV G
Sbjct 93 RIGQLAVAQSNIKPEGPLARDDYRIDYEGIAFDDGVPINNVLPNGLRLGVDPAVVPRDGL 152
Query 136 AVCHFGVSTGETCGTVESVNNGWFTMSHGVLSEKGDSGGPVYLAPDGGPAQIVGIF---- 191
VC G++TGE CG + NGWF + GV +E GDSG VY G A IVGI
Sbjct 153 PVCRVGITTGEACGAIAGFGNGWF-LVDGVPAEHGDSGSAVYTVTSPGNAAIVGIVSARF 211
Query 192 --NSVWGGFPAAVSWRSTSEQVHADL 215
N A+SW + +Q+ D+
Sbjct 212 TANQTRRESTVALSWPTVQQQIRNDI 237
>gi|169630430|ref|YP_001704079.1| hypothetical protein MAB_3349 [Mycobacterium abscessus ATCC 19977]
gi|169242397|emb|CAM63425.1| Conserved hypothetical protein [Mycobacterium abscessus]
Length=226
Score = 133 bits (334), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 86/215 (40%), Positives = 117/215 (55%), Gaps = 11/215 (5%)
Query 9 FAATVALLAA--GFSPATASADPVLVFPGMEIRQDNHVCTLGYVDPALKIAFTAGHC-RG 65
A VA+L +PA A+P LV+PGM I Q + CTLGYVDPAL++ TAGHC G
Sbjct 7 IATIVAVLCVLPAVNPAPVHAEPPLVYPGMLIYQGSLSCTLGYVDPALRVGITAGHCFNG 66
Query 66 GGAVTSRDYKVIGHLRAIRDNTPSGSTVATHELIADYEAIVLADDVTASNILPSGRALES 125
G + + D +GH DN P V +E DYEAI + D + +++L +G+ LE
Sbjct 67 DGIIRNGDGAAVGHKVLAHDNRPPEGPVYENEYTIDYEAISIDDGLPVNDVLANGQRLER 126
Query 126 RPGVVLHPGQAVCHFGVSTGETCGTVESVNNGWFTMSHGVLSEKGDSGGPVYLAPDGGPA 185
V+ G VC G +TG+ CG+V + NGWF + V++ KGDSGGPVY G
Sbjct 127 DDTVIPDVGMPVCRTGFTTGDACGSVTRIGNGWFRFNGPVIA-KGDSGGPVYTHV-GDRT 184
Query 186 QIVGI---FNSVWGGFPA---AVSWRSTSEQVHAD 214
+VGI F + G A+SW S +Q+ D
Sbjct 185 VLVGIIRGFMTSQSGDDVQSWAMSWPSVIKQLRED 219
>gi|145226120|ref|YP_001136774.1| hypothetical protein Mflv_5525 [Mycobacterium gilvum PYR-GCK]
gi|145218583|gb|ABP47986.1| conserved hypothetical protein [Mycobacterium gilvum PYR-GCK]
Length=227
Score = 132 bits (331), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 78/192 (41%), Positives = 108/192 (57%), Gaps = 6/192 (3%)
Query 22 PATASADPVLV-FPGMEIRQDNHVCTLGYVDPALKIAFTAGHCRGGGAVTSRDYKVIGHL 80
P ASA P ++ +PGM I Q + C +G++D +IA++AGHC VT + + IG +
Sbjct 23 PIPASAGPAMMAYPGMAIAQGDSACAIGFIDTRRRIAYSAGHCATTQTVTDQAGRTIGVV 82
Query 81 RAIRDNTPSGSTVATHELIADYEAIVLADDVTASNIL-PSG-RALESRPGVVLHPGQAVC 138
N + + DY+ I L ++ A+N L P+G R L + PGV PG VC
Sbjct 83 ALSEHNRAGHKRTGPRDSVIDYQVIALNSNIQATNQLGPNGTRPLITEPGVKPKPGMKVC 142
Query 139 HFGVSTGETCGTVESVNNGWFTMSHGVL-SEKGDSGGPV--YLAPDGGPAQIVGIFNSVW 195
G +TG +CGT+E+VN+GWFTM+ G + S+ GDSG PV Y G IVGI +
Sbjct 143 QLGPATGSSCGTIEAVNDGWFTMAPGSMTSQHGDSGAPVYTYTTASGPKPVIVGILRGLN 202
Query 196 GGFPAAVSWRST 207
GG AAVSW T
Sbjct 203 GGQVAAVSWPDT 214
>gi|118617513|ref|YP_905845.1| hypothetical protein MUL_1916 [Mycobacterium ulcerans Agy99]
gi|118569623|gb|ABL04374.1| conserved hypothetical membrane protein [Mycobacterium ulcerans
Agy99]
Length=231
Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/209 (36%), Positives = 112/209 (54%), Gaps = 3/209 (1%)
Query 7 RAFAATVALLAAGFSPATASADP-VLVFPGMEIRQDNHVCTLGYVDPALKIAFTAGHCRG 65
RA A V +L + +PA A V +PG+EI Q + VC +G+V+P ++IAF+AG C G
Sbjct 7 RAAIAVVFVLVSVETPALGRAAVGVTAYPGLEIHQGSVVCVIGFVEPQMRIAFSAGRCNG 66
Query 66 GGAVTSRDYKVIGHLRAIRDNTPSGSTVATHELIADYEAIVLADDVTASNILPSGRALES 125
VT R +G + T S V DYE I LA +V A+++LP+G L+S
Sbjct 67 DPMVTDRYGNAVGAVTLAGQATVSEVAVDGAAAGVDYEVITLAPEVAATDLLPTGLRLQS 126
Query 126 RPGVVLHPGQAVCHFGVSTGETCGTVESVNNGWFTMSHGVLSEKGDSGGPVYLAPDGGPA 185
+PG + PG VC + + CG V++V F ++ G+ +++ + G PVY+ D A
Sbjct 127 KPGFRVQPGARVCE-ATAARQRCGRVDTVTESRFVIA-GMDADQHEIGAPVYVLDDDNHA 184
Query 186 QIVGIFNSVWGGFPAAVSWRSTSEQVHAD 214
I G+ + V G A SW + QV+ D
Sbjct 185 LIAGLLDGVRGSISEAQSWPAVMRQVYLD 213
>gi|183981692|ref|YP_001849983.1| hypothetical protein MMAR_1678 [Mycobacterium marinum M]
gi|183175018|gb|ACC40128.1| conserved hypothetical membrane protein [Mycobacterium marinum
M]
Length=231
Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 74/209 (36%), Positives = 113/209 (55%), Gaps = 3/209 (1%)
Query 7 RAFAATVALLAAGFSPATASADP-VLVFPGMEIRQDNHVCTLGYVDPALKIAFTAGHCRG 65
RA A V +L + +PA A V +PG+EI Q + VC +G+V+P ++IAF+AG C G
Sbjct 7 RAAIAVVFVLVSVETPALGRAAVGVTAYPGLEIHQGSVVCVIGFVEPQMRIAFSAGRCNG 66
Query 66 GGAVTSRDYKVIGHLRAIRDNTPSGSTVATHELIADYEAIVLADDVTASNILPSGRALES 125
VT R +G + T S V DYE I LA +V A+++LP+G L+S
Sbjct 67 DPMVTDRYGNAVGAVTLAGQATVSEVAVDGAAAGVDYEVITLAPEVAATDLLPTGLRLQS 126
Query 126 RPGVVLHPGQAVCHFGVSTGETCGTVESVNNGWFTMSHGVLSEKGDSGGPVYLAPDGGPA 185
+PG + PG VC + ++CG V++V F ++ G+ +++ + G PVY+ D A
Sbjct 127 KPGFRVQPGARVCE-ATAARQSCGRVDTVTESRFVIA-GMDADQHEIGAPVYVLDDDNHA 184
Query 186 QIVGIFNSVWGGFPAAVSWRSTSEQVHAD 214
I G+ + V G A SW + QV+ D
Sbjct 185 LIAGLLDGVRGSTSEAQSWPAVMRQVYLD 213
>gi|169630428|ref|YP_001704077.1| hypothetical protein MAB_3347 [Mycobacterium abscessus ATCC 19977]
gi|169242395|emb|CAM63423.1| Conserved hypothetical protein [Mycobacterium abscessus]
Length=261
Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/202 (38%), Positives = 101/202 (50%), Gaps = 11/202 (5%)
Query 23 ATASADPVLVFPGMEIRQDNHVCTLGYVDPALKIAFTAGHC--RGGGAVTSRDYKVIGHL 80
A A AD LV+PGM I Q CTLG+VDP +I TAGHC G V +G
Sbjct 30 AIAHADAPLVYPGMRINQGTQSCTLGFVDPGARIGLTAGHCALDSDGPVYDDSGNRVGTA 89
Query 81 R-AIRDNTPSGSTVATHELIADYEAIVLADDVTASNILPSGRALESRPGVVLHPGQAVCH 139
A + TP + A I DYE I + + +N+LP+G LES P +V G VC
Sbjct 90 DIAHFEPTPQDKSFAEQPPI-DYEGIAFYEGIPINNVLPNGLVLESNPKIVPAIGMPVCR 148
Query 140 FGVSTGETCGTVESVNNGWFTMSHGVLSEKGDSGGPVYLAPDGGPAQIVGIFNSVWGGFP 199
GV+TGE CG + + + G+ ++ GDSG PVY + G A IVGI V
Sbjct 149 SGVTTGEACGVILETTDSLLVID-GLPADHGDSGSPVYAITEPGRAAIVGITTEVLTSKS 207
Query 200 A------AVSWRSTSEQVHADL 215
A+SWR+ Q+ +D+
Sbjct 208 TGQRATMAISWRAIWRQIKSDI 229
>gi|68536652|ref|YP_251357.1| putative secreted protein [Corynebacterium jeikeium K411]
gi|68264251|emb|CAI37739.1| putative secreted protein [Corynebacterium jeikeium K411]
Length=285
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/184 (32%), Positives = 85/184 (47%), Gaps = 25/184 (13%)
Query 25 ASADPVLVFPGMEIRQDNHVCTL---GYVDPALKIAFTAGHCRGGGA-VTSRDYKVIGHL 80
A+A VL P M I N++CTL GY K+ TAGHC G GA V S D + G +
Sbjct 87 AAAPSVLAGPSMPIYVGNNICTLGVVGYDKAGNKVGITAGHCGGPGAPVVSMDAEGAGQI 146
Query 81 -RAIRDNTPSGSTVATHELIADYEAIVLADDVTASNILPSGRALESRPGVVLHPGQAVCH 139
+R+ P DY I + V + + L + G Q +C
Sbjct 147 GTVVRNGYP------------DYAVIKFNNKVRLTRGY-NNVHLNALGGPTPASLQQICK 193
Query 140 FGVSTGETCGTVESVNNGWFTMSHGVLSEKGDSGGPVYLAPDGGPAQIVGIFNSVWGGFP 199
GV+TG +CG + ++ +G F +SH + GDSGGP+Y+ ++VGI N P
Sbjct 194 TGVATGVSCGPMLAI-SGPFLVSH-LCGSMGDSGGPIYVG-----NRLVGIVNGGVANLP 246
Query 200 AAVS 203
+ +
Sbjct 247 SCTT 250
>gi|260577852|ref|ZP_05845785.1| secreted protein [Corynebacterium jeikeium ATCC 43734]
gi|258604011|gb|EEW17255.1| secreted protein [Corynebacterium jeikeium ATCC 43734]
Length=259
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/184 (32%), Positives = 85/184 (47%), Gaps = 25/184 (13%)
Query 25 ASADPVLVFPGMEIRQDNHVCTL---GYVDPALKIAFTAGHCRGGGA-VTSRDYKVIGHL 80
A+A VL P M I N++CTL GY K+ TAGHC G GA V S D + G +
Sbjct 61 AAAPSVLAGPSMPIYVGNNICTLGVVGYDKAGNKVGITAGHCGGPGAPVVSMDAEGAGQI 120
Query 81 -RAIRDNTPSGSTVATHELIADYEAIVLADDVTASNILPSGRALESRPGVVLHPGQAVCH 139
+R+ P DY I + V + + L + G Q +C
Sbjct 121 GTVVRNGYP------------DYAVIKFNNKVRLTRGY-NNVHLNALGGPTPASLQQICK 167
Query 140 FGVSTGETCGTVESVNNGWFTMSHGVLSEKGDSGGPVYLAPDGGPAQIVGIFNSVWGGFP 199
GV+TG +CG + ++ +G F +SH + GDSGGP+Y+ ++VGI N P
Sbjct 168 TGVATGVSCGPMLAI-SGPFLVSH-LCGSMGDSGGPIYVG-----NRLVGIVNGGVANLP 220
Query 200 AAVS 203
+ +
Sbjct 221 SCTT 224
>gi|240171161|ref|ZP_04749820.1| hypothetical protein MkanA1_17751 [Mycobacterium kansasii ATCC
12478]
gi|296165411|ref|ZP_06847952.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295899302|gb|EFG78767.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=238
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/183 (32%), Positives = 80/183 (44%), Gaps = 21/183 (11%)
Query 22 PATASADPVLVFPGMEIRQ-----DNHVCTLGYVDPALKI---AFTAGHCRG----GGAV 69
P +A A +V PG E+ N CT+GYV + A TA HCR G A
Sbjct 25 PPSAHAALAVVSPGEEVDYINPTGGNQFCTIGYVYTGADLHTYAITAAHCRSDPASGYAR 84
Query 70 TSRDYKVIGHLRAIRDNTPSGSTVATHELIADYEAIVLADDVTASNILPSGRALESRPGV 129
R +R I ++ SG ADY I + AS + + L +
Sbjct 85 DKRSGLTGKFVRTIFESPRSGG--------ADYALIDFNTNSMASAFIDANHTLFTDDHP 136
Query 130 VLHPGQAVCHFGVSTGETCGTVESVNNGWFTMSHGVL-SEKGDSGGPVYLAPDGGPAQIV 188
G+ VC GVS+G+ CG + + ++ G+ S GDSGGPV+ G AQI+
Sbjct 137 EPQVGETVCRIGVSSGQHCGQIAAAQGRDQYLTTGMPPSIPGDSGGPVWTPTSQGYAQII 196
Query 189 GIF 191
GI+
Sbjct 197 GIW 199
>gi|213966288|ref|ZP_03394471.1| putative secreted protein [Corynebacterium amycolatum SK46]
gi|213951061|gb|EEB62460.1| putative secreted protein [Corynebacterium amycolatum SK46]
Length=210
Score = 55.5 bits (132), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/160 (32%), Positives = 77/160 (49%), Gaps = 22/160 (13%)
Query 44 VCTLGYVDPALKIAFTAGHC-RGGGAVTSRDYKVIGHLRAIRDNTPSGSTVATHELIADY 102
VCT GYVD +TAGHC + G VT ++ IG + PS + + + D
Sbjct 45 VCTAGYVDKTNSQIYTAGHCGQDGDTVTDGTFQKIGVFQ------PSPTYDHSLDTGNDI 98
Query 103 EAIVLADDVTASNILPSGRALESRPGVVLHPGQAVCHFGVSTGE-TCG------TVESVN 155
+ L D A L SG + S V G+ VC +G +TG+ +CG ++ +
Sbjct 99 GVVSLDDPAIAGENLYSGDSTLSPTDV--QTGETVCIYGNTTGKVSCGLAADREAYQTED 156
Query 156 NGWFTMSHGVLSEKGDSGGPVYLAPDGGPAQIVGIFNSVW 195
N V +++GDSGGPV++ PD G VG+ ++ W
Sbjct 157 NA--LQVQNVQAQRGDSGGPVWV-PDKG---AVGVVSTTW 190
>gi|296141120|ref|YP_003648363.1| hypothetical protein Tpau_3440 [Tsukamurella paurometabola DSM
20162]
gi|296029254|gb|ADG80024.1| hypothetical protein Tpau_3440 [Tsukamurella paurometabola DSM
20162]
Length=235
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/144 (31%), Positives = 67/144 (47%), Gaps = 8/144 (5%)
Query 41 DNHVCTLGYV---DPALKIAFTAGHCRGGGAVTSRDYKVIGHLRAIRDNTPSGSTVATHE 97
D CT+G++ ++ AGHC G D ++ G + + P+ + T
Sbjct 56 DGRGCTVGFIGQRQDGTRVGVYAGHCGAQGQRVVVDGRIAGV--NVASSAPALTKTDTFV 113
Query 98 LIADYEAIVLADDVTASNILPSGRALESRPGVVLHPGQAVCHFGVSTGETCGTVESVNNG 157
+ + V D + P G+ + GV PG VC GVS+G CGTV SV+NG
Sbjct 114 VPNAPDWGVFELDPRVARATPGGKIRPASVGVA-KPGDPVCSQGVSSGWRCGTVISVDNG 172
Query 158 WFTMSHGVLSEKGDSGGPVYLAPD 181
+ + GV + GDSGGP+ + D
Sbjct 173 YIATTIGV--QVGDSGGPLVRSTD 194
>gi|19552017|ref|NP_600019.1| hypothetical protein NCgl0757 [Corynebacterium glutamicum ATCC
13032]
gi|62389680|ref|YP_225082.1| hypothetical protein cg0901 [Corynebacterium glutamicum ATCC
13032]
gi|21323557|dbj|BAB98184.1| Hypothetical protein [Corynebacterium glutamicum ATCC 13032]
gi|41325015|emb|CAF19496.1| secreted protein [Corynebacterium glutamicum ATCC 13032]
Length=354
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/151 (36%), Positives = 70/151 (47%), Gaps = 19/151 (12%)
Query 31 LVFPGMEIRQD-NHVCTL---GYVDPALKIAFTAGHC-RGGGAVTSRDYKVIGHLRAIRD 85
L PG I + N +CTL G KI TAGHC + G AV S D +G +
Sbjct 157 LYGPGTPIYLNGNSMCTLAVTGTDADGRKIGITAGHCGKSGDAVRSADSFWVGDTGTVVY 216
Query 86 NTPSGSTVATHELIADYEAIVLADDVTASNILPSGRALESRPGVVLHPGQAVCHFGVSTG 145
N P+ ADY I + SN +G + G V + GQ VC GV+TG
Sbjct 217 NAPN----------ADYSVIEFGSNAELSNTY-NGVTANAVGGGVTN-GQEVCKNGVATG 264
Query 146 ETCGTVESVNNGWFTMSHGVLSEKGDSGGPV 176
TCG V + + TMS V + +GDSG P+
Sbjct 265 YTCGLVWTADE-RMTMSQ-VCAGRGDSGAPL 293
>gi|344043708|gb|EGV39396.1| hypothetical protein CgS9114_13056 [Corynebacterium glutamicum
S9114]
Length=354
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/151 (36%), Positives = 70/151 (47%), Gaps = 19/151 (12%)
Query 31 LVFPGMEIRQD-NHVCTL---GYVDPALKIAFTAGHC-RGGGAVTSRDYKVIGHLRAIRD 85
L PG I + N +CTL G KI TAGHC + G AV S D +G +
Sbjct 157 LYGPGTPIYLNGNSMCTLAVTGTDADGRKIGITAGHCGKSGDAVRSADSFWVGDTGTVVY 216
Query 86 NTPSGSTVATHELIADYEAIVLADDVTASNILPSGRALESRPGVVLHPGQAVCHFGVSTG 145
N P+ ADY I + SN +G + G V + GQ VC GV+TG
Sbjct 217 NAPN----------ADYSVIEFGSNAELSNTY-NGVTANAVGGGVTN-GQEVCKNGVATG 264
Query 146 ETCGTVESVNNGWFTMSHGVLSEKGDSGGPV 176
TCG V + + TMS V + +GDSG P+
Sbjct 265 YTCGLVWTADE-RMTMSQ-VCAGRGDSGAPL 293
>gi|145294954|ref|YP_001137775.1| hypothetical protein cgR_0900 [Corynebacterium glutamicum R]
gi|140844874|dbj|BAF53873.1| hypothetical protein [Corynebacterium glutamicum R]
Length=354
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/151 (36%), Positives = 70/151 (47%), Gaps = 19/151 (12%)
Query 31 LVFPGMEIRQD-NHVCTL---GYVDPALKIAFTAGHC-RGGGAVTSRDYKVIGHLRAIRD 85
L PG I + N +CTL G KI TAGHC + G AV S D +G +
Sbjct 157 LYGPGTPIYLNGNSMCTLAVTGTDADGRKIGITAGHCGKSGDAVRSADSFWVGDTGTVVY 216
Query 86 NTPSGSTVATHELIADYEAIVLADDVTASNILPSGRALESRPGVVLHPGQAVCHFGVSTG 145
N P+ ADY I + SN +G + G V + GQ VC GV+TG
Sbjct 217 NAPN----------ADYSVIEFGSNAELSNTY-NGVTANAVGGGVTN-GQEVCKNGVATG 264
Query 146 ETCGTVESVNNGWFTMSHGVLSEKGDSGGPV 176
TCG V + + TMS V + +GDSG P+
Sbjct 265 YTCGLVWTADE-RMTMSQ-VCAGRGDSGAPL 293
>gi|296139058|ref|YP_003646301.1| hypothetical protein Tpau_1333 [Tsukamurella paurometabola DSM
20162]
gi|296027192|gb|ADG77962.1| hypothetical protein Tpau_1333 [Tsukamurella paurometabola DSM
20162]
Length=293
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/159 (27%), Positives = 62/159 (39%), Gaps = 13/159 (8%)
Query 39 RQDNHVCTLGYVDPA---LKIAFTAGHCRGGGAVTSRDYKVIGHL------RAIRDNTPS 89
R ++ CT+G+ A ++ TAGHC ++G + + D
Sbjct 100 RFESLQCTMGFAVTAPNGERLGVTAGHCGSAEQPVGVKKWIVGEVVQSVAPKVTEDPKRP 159
Query 90 GSTVATHELIADYEAIVLADDVTASNILPSGRALESRPGVVLHPGQAVCHFGVSTGETCG 149
G T D+ L D +L S + R V PG VC G G CG
Sbjct 160 GHFSPTDPFQPDWATFRLTDPTV--KLLASSPQIAPRSTGVARPGDPVCQLGSVNGHRCG 217
Query 150 TVESVNNGWFTMSHGVLSEKGDSGGPVYLAPDGGPAQIV 188
TV V N W +++++GDSGGP+ D I+
Sbjct 218 TVTKVMNDWVVTD--IVTKQGDSGGPLIRTTDNAALGII 254
>gi|296164350|ref|ZP_06846933.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295900301|gb|EFG79724.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=215
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/182 (34%), Positives = 78/182 (43%), Gaps = 25/182 (13%)
Query 22 PATASADPVLVFPGMEIR----QDNHVCTLGYV--DPALKIAF--TAGHC-RGGGAVTSR 72
PATA A + PG EI CTLGY DP I + TAGHC +G V R
Sbjct 15 PATAQARAATISPGDEIDTIQAHGGTRCTLGYTFTDPGTNINYGITAGHCNKGSDHVLDR 74
Query 73 DYKVIGHLRAIRDNTPSGSTVAT--HELIADYEAIVLADDVTASNILPSGRALESRPGVV 130
IGH TVAT L DY I D A + + + L
Sbjct 75 TTGAIGHFIL---------TVATPGDNLQDDYGLI----DFGAHHSVRTMYGLRVGAIST 121
Query 131 LHPGQAVCHFGVSTGETCGTVESVNNGWFTMSHGVL-SEKGDSGGPVYLAPDGGPAQIVG 189
P VCH G+STG CG++ + ++ G+ S GDSGGPV+ A ++G
Sbjct 122 PDPHTPVCHDGISTGIACGSLGDILIANQYLTTGMAPSIPGDSGGPVWQFARDTTATVIG 181
Query 190 IF 191
I+
Sbjct 182 IW 183
>gi|9507331|ref|NP_040426.1| hypothetical protein pAL5000p3 [Plasmid pAL5000]
gi|473456|gb|AAA98173.1| unknown protein [Plasmid pAL5000]
Length=255
Score = 52.4 bits (124), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 61/203 (31%), Positives = 86/203 (43%), Gaps = 37/203 (18%)
Query 22 PATASAD----PVLVFPGMEIRQ-------DNHVCTLGYV--DPALKIAF--TAGHCRGG 66
PA A D P + PG I Q D CTLG + DP+ + AGHC G
Sbjct 31 PAVADTDWTAFPGGIAPGAGIAQARPGGDEDFATCTLGVIAGDPSTHKLYGIAAGHCDHG 90
Query 67 GAV------TSRDYKVIGHLRAIRDNTPSGSTVATHE----LIADYEAIVLADDVTASNI 116
G V + +G A RD G+T+ + + D I A ++
Sbjct 91 GPVLYSVAEKPDTQRTLGTYVASRDE---GTTITGDDDLLPVYTDAGVIAFAPGTPIASF 147
Query 117 LPSGR-----ALESRPGVVLHPGQAVCHFGVSTGETCGTVESVNNGWFTMSHGVLSEKGD 171
GR L+ R V G VC +G+ +GETCG V V +T++ + + GD
Sbjct 148 KIGGRYPVRAVLKDRKDVPY--GTEVCKYGMKSGETCGPV--VVAAKYTITAQLRTVHGD 203
Query 172 SGGPVYLAPDGGPAQIVGIFNSV 194
SG P+Y G A ++GI +SV
Sbjct 204 SGAPLYRKNRDGTADLIGIASSV 226
>gi|312139009|ref|YP_004006345.1| hypothetical protein REQ_15830 [Rhodococcus equi 103S]
gi|311888348|emb|CBH47660.1| putative secreted protein [Rhodococcus equi 103S]
Length=240
Score = 51.6 bits (122), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 54/157 (35%), Positives = 68/157 (44%), Gaps = 16/157 (10%)
Query 40 QDNHVCTLGYV-DPAL--KIAFTAGHC---RGGGAVTSRDYKVIGHLRAIRDNTPSGSTV 93
Q+ CTLG V AL KIA +AGHC GGA D + P G TV
Sbjct 61 QNQEYCTLGVVGTDALGNKIAISAGHCVSAAAGGATDFPDGSTVYRFGPSGTGDPIG-TV 119
Query 94 ATHELIADYEAIVLADDVTASNILPSGRALESRPGVVLHPGQAVCHFGVSTGETCGTVES 153
A + DY I L D S+ P R P HP +C GV TG TCG +
Sbjct 120 AYRDPRIDYVVIELNPDAVLSSDGPEARIDSLGP---AHPDGMLCKAGVRTGLTCGPIYG 176
Query 154 VNNGWFTMSHGVLSEKGDSGGPVYLAPDGGPAQIVGI 190
+S V + GDSGGP ++ +Q+VG+
Sbjct 177 QE--AQRISSFVTANGGDSGGPAFV----NGSQLVGM 207
>gi|296166510|ref|ZP_06848941.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295898122|gb|EFG77697.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=220
Score = 51.6 bits (122), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 56/192 (30%), Positives = 78/192 (41%), Gaps = 23/192 (11%)
Query 13 VALLAAGFSPATASADPVL----VFPGMEIRQDNHVCTLGYV---DPALKIAFTAGHCRG 65
+ L+ A F +T A P V PG+++ DN+ CT G+ + T+GHC G
Sbjct 14 LVLIGAVFVASTTLACPARADAGVTPGIKVGYDNNSCTAGFAAQGNDGSYYLMTSGHCDG 73
Query 66 GGAVTSRDYKVIGHLRAIRDNTPSGSTVATH-ELIADYEAIVLADDVTASNILPSGRALE 124
G ++ P G A+ E A AI+L D + G E
Sbjct 74 HD----------GSSWTYGNDVPLGKITASEKEGDARDAAIILLDPSVGVPLGHVGGRYE 123
Query 125 SRPGVV---LHPGQAVCHFGVSTGETCGTVESVNNGWFTMSHGVLSEKGDSGGPVYLAPD 181
R + + G C G TGETCG V+ V+ G S V S GDSG P ++
Sbjct 124 VRDVLTADQIREGMPFCKIGAVTGETCGFVKHVDGGVVEAS--VFSLNGDSGSPGFVKNP 181
Query 182 GGPAQIVGIFNS 193
G VG+ S
Sbjct 182 DGTVSAVGLLTS 193
>gi|306835534|ref|ZP_07468548.1| secreted protein [Corynebacterium accolens ATCC 49726]
gi|304568591|gb|EFM44142.1| secreted protein [Corynebacterium accolens ATCC 49726]
Length=363
Score = 51.6 bits (122), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 52/159 (33%), Positives = 76/159 (48%), Gaps = 26/159 (16%)
Query 44 VCTL---GYVDPALKIAFTAGHC-RGGGAVTSRDYKVIGHLRAIRDNTPSGSTVATHELI 99
+CTL G K+ TAGHC G A+TS D IG P+G+ V+ + +
Sbjct 181 MCTLSVAGNDAAGRKVGLTAGHCGNEGDAITSADSDHIG---------PTGTIVSKNAAL 231
Query 100 ADYEAIVLADDVTASNILPSGRALESRPGVVLHPGQAVCHFGVSTGETCGTVESVNNGWF 159
DY I + + +G + S G V +PG+ VC GV+TG+TCG +
Sbjct 232 -DYSVIEFGSNAEVTRTY-NGVTVNSLGGTV-NPGETVCKQGVATGKTCGM--TYQQAQS 286
Query 160 TMSHGVLSEKGDSGGPVYLAPDGGPAQIVGIFNSVWGGF 198
+ V + GDSG P+ LA D +++G S+ GGF
Sbjct 287 VQVNQVCAMMGDSGAPL-LAGD----RLIG---SISGGF 317
>gi|227502933|ref|ZP_03932982.1| conserved hypothetical protein [Corynebacterium accolens ATCC
49725]
gi|227076355|gb|EEI14318.1| conserved hypothetical protein [Corynebacterium accolens ATCC
49725]
Length=363
Score = 51.6 bits (122), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 52/159 (33%), Positives = 76/159 (48%), Gaps = 26/159 (16%)
Query 44 VCTL---GYVDPALKIAFTAGHC-RGGGAVTSRDYKVIGHLRAIRDNTPSGSTVATHELI 99
+CTL G K+ TAGHC G A+TS D IG P+G+ V+ + +
Sbjct 181 MCTLSVAGNDAAGRKVGLTAGHCGNEGDAITSADSDHIG---------PTGTIVSKNAAL 231
Query 100 ADYEAIVLADDVTASNILPSGRALESRPGVVLHPGQAVCHFGVSTGETCGTVESVNNGWF 159
DY I + + +G + S G V +PG+ VC GV+TG+TCG +
Sbjct 232 -DYSVIEFGSNAEVTRTY-NGVTVNSLGGTV-NPGETVCKQGVATGKTCGM--TYQQAQS 286
Query 160 TMSHGVLSEKGDSGGPVYLAPDGGPAQIVGIFNSVWGGF 198
+ V + GDSG P+ LA D +++G S+ GGF
Sbjct 287 VQVNQVCAMMGDSGAPL-LAGD----RLIG---SISGGF 317
>gi|336326238|ref|YP_004606204.1| hypothetical protein CRES_1688 [Corynebacterium resistens DSM
45100]
gi|336102220|gb|AEI10040.1| putative secreted protein [Corynebacterium resistens DSM 45100]
Length=301
Score = 51.6 bits (122), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 56/173 (33%), Positives = 73/173 (43%), Gaps = 25/173 (14%)
Query 25 ASADPVLVFPGMEIRQDNHVCTL---GYVDPALKIAFTAGHCRGGGA-VTSRDYKVIGHL 80
A A LV P I + VCTL G K+ TA HC G GA V S D G +
Sbjct 103 AIAPKTLVGPSTPILVGDSVCTLAVAGTDKHGNKVGITAAHCGGPGAPVVSLDNSKAGRI 162
Query 81 RAIRDNTPSGSTVATHELIADYEAIVLADDVTASNILPSGR-ALESRPGVVLHPGQAVCH 139
+ AD I DV + GR A+ G V G+ +C
Sbjct 163 GTV-----------VRSGYADVSVIKFNRDVQLTRNY--GRVAINRLGGYVPATGERICK 209
Query 140 FGVSTGETCGTVESVNNGWFTMSHGVLSEKGDSGGPVYLAPDGGPAQIVGIFN 192
G+STG +CG + ++ NG +SH + GDSG PVY ++VGI N
Sbjct 210 TGISTGTSCGPMVAI-NGPMLVSH-LCGSYGDSGAPVYSR-----GRLVGIVN 255
Lambda K H
0.318 0.135 0.415
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 276581767512
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40