BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv1816
Length=234
Score E
Sequences producing significant alignments: (Bits) Value
gi|15608953|ref|NP_216332.1| transcriptional regulatory protein ... 467 7e-130
gi|254231998|ref|ZP_04925325.1| hypothetical protein TBCG_01769 ... 450 6e-125
gi|342861284|ref|ZP_08717932.1| TetR family transcriptional regu... 379 1e-103
gi|254823251|ref|ZP_05228252.1| hypothetical protein MintA_25199... 377 5e-103
gi|240173103|ref|ZP_04751761.1| putative transcriptional regulat... 374 5e-102
gi|41407626|ref|NP_960462.1| hypothetical protein MAP1528 [Mycob... 374 9e-102
gi|254775375|ref|ZP_05216891.1| hypothetical protein MaviaA2_119... 371 5e-101
gi|296164801|ref|ZP_06847361.1| TetR-family transcriptional regu... 366 2e-99
gi|118466308|ref|YP_882085.1| TetR family transcriptional regula... 363 1e-98
gi|333992552|ref|YP_004525166.1| transcriptional regulator [Myco... 298 4e-79
gi|120404146|ref|YP_953975.1| TetR family transcriptional regula... 295 4e-78
gi|145224000|ref|YP_001134678.1| TetR family transcriptional reg... 282 4e-74
gi|315444332|ref|YP_004077211.1| TetR family transcriptional reg... 281 6e-74
gi|108799824|ref|YP_640021.1| TetR family transcriptional regula... 257 8e-67
gi|118469001|ref|YP_887962.1| TetR family transcriptional regula... 248 5e-64
gi|126435467|ref|YP_001071158.1| TetR family transcriptional reg... 235 3e-60
gi|325677340|ref|ZP_08157005.1| TetR-family transcriptional regu... 210 2e-52
gi|312141997|ref|YP_004009333.1| tetr family transcriptional reg... 209 4e-52
gi|262202897|ref|YP_003274105.1| TetR family transcriptional reg... 207 1e-51
gi|220914362|ref|YP_002489671.1| TetR family transcriptional reg... 189 4e-46
gi|343924223|ref|ZP_08763786.1| putative TetR family transcripti... 187 8e-46
gi|111020620|ref|YP_703592.1| TetR family transcriptional regula... 183 2e-44
gi|226309490|ref|YP_002769452.1| TetR family transcriptional reg... 181 6e-44
gi|226362863|ref|YP_002780643.1| TetR family transcriptional reg... 180 2e-43
gi|116672352|ref|YP_833285.1| TetR family transcriptional regula... 176 2e-42
gi|340795564|ref|YP_004761027.1| TetR DNA-binding transcription ... 172 4e-41
gi|229491157|ref|ZP_04384985.1| transcriptional regulator, TetR ... 170 2e-40
gi|257068375|ref|YP_003154630.1| transcriptional regulator, tetR... 168 7e-40
gi|256826080|ref|YP_003150040.1| transcriptional regulator [Kyto... 153 2e-35
gi|260907214|ref|ZP_05915536.1| transcriptional regulator, TetR ... 146 3e-33
gi|296269149|ref|YP_003651781.1| TetR family transcriptional reg... 145 5e-33
gi|297158268|gb|ADI07980.1| TetR family transcriptional regulato... 143 2e-32
gi|269128342|ref|YP_003301712.1| TetR family transcriptional reg... 143 2e-32
gi|163839499|ref|YP_001623904.1| TetR family transcriptional reg... 140 1e-31
gi|271963846|ref|YP_003338042.1| TetR family transcriptional reg... 140 2e-31
gi|312198043|ref|YP_004018104.1| TetR family transcriptional reg... 138 5e-31
gi|227548759|ref|ZP_03978808.1| TetR family transcriptional regu... 137 1e-30
gi|291299818|ref|YP_003511096.1| TetR family transcriptional reg... 137 2e-30
gi|300790738|ref|YP_003771029.1| TetR family transcriptional reg... 135 4e-30
gi|291442826|ref|ZP_06582216.1| TetR-family transcriptional regu... 135 7e-30
gi|302549531|ref|ZP_07301873.1| TetR-family transcriptional regu... 134 7e-30
gi|326381454|ref|ZP_08203148.1| tetr family transcriptional regu... 134 1e-29
gi|336117915|ref|YP_004572683.1| putative TetR family transcript... 134 1e-29
gi|297155420|gb|ADI05132.1| TetR family transcriptional regulato... 133 2e-29
gi|84497484|ref|ZP_00996306.1| putative transcriptional regulato... 133 2e-29
gi|302540804|ref|ZP_07293146.1| TetR-family transcriptional regu... 133 2e-29
gi|302530947|ref|ZP_07283289.1| TetR-family transcriptional regu... 132 3e-29
gi|54024584|ref|YP_118826.1| putative transcriptional regulator ... 132 6e-29
gi|256391020|ref|YP_003112584.1| TetR family transcriptional reg... 131 9e-29
gi|326780996|ref|ZP_08240261.1| regulatory protein TetR [Strepto... 130 2e-28
>gi|15608953|ref|NP_216332.1| transcriptional regulatory protein [Mycobacterium tuberculosis
H37Rv]
gi|15841286|ref|NP_336323.1| hypothetical protein MT1864 [Mycobacterium tuberculosis CDC1551]
gi|31793005|ref|NP_855498.1| transcriptional regulatory protein [Mycobacterium bovis AF2122/97]
53 more sequence titles
Length=234
Score = 467 bits (1201), Expect = 7e-130, Method: Compositional matrix adjust.
Identities = 233/234 (99%), Positives = 234/234 (100%), Gaps = 0/234 (0%)
Query 1 LCQTCRVGKRRDAREQIEAKIVELGRRQLLDHGAAGLSLRAIARNLGMVSSAVYRYVSSR 60
+CQTCRVGKRRDAREQIEAKIVELGRRQLLDHGAAGLSLRAIARNLGMVSSAVYRYVSSR
Sbjct 1 MCQTCRVGKRRDAREQIEAKIVELGRRQLLDHGAAGLSLRAIARNLGMVSSAVYRYVSSR 60
Query 61 DELLTLLLVDAYSDLADTVDRARDDTVADSWSDDVIAIARAVRGWAVTNPARWALLYGSP 120
DELLTLLLVDAYSDLADTVDRARDDTVADSWSDDVIAIARAVRGWAVTNPARWALLYGSP
Sbjct 61 DELLTLLLVDAYSDLADTVDRARDDTVADSWSDDVIAIARAVRGWAVTNPARWALLYGSP 120
Query 121 VPGYHAPPDRTAGVATRVVGAFFDAIAAGIATGDIRLTDDVAPQPMSSDFEKIRQEFGFP 180
VPGYHAPPDRTAGVATRVVGAFFDAIAAGIATGDIRLTDDVAPQPMSSDFEKIRQEFGFP
Sbjct 121 VPGYHAPPDRTAGVATRVVGAFFDAIAAGIATGDIRLTDDVAPQPMSSDFEKIRQEFGFP 180
Query 181 GDDRVVTKCFLLWAGVVGAISLEVFGQYGADMLTDPGVVFDAQTRLLVAVLAEH 234
GDDRVVTKCFLLWAGVVGAISLEVFGQYGADMLTDPGVVFDAQTRLLVAVLAEH
Sbjct 181 GDDRVVTKCFLLWAGVVGAISLEVFGQYGADMLTDPGVVFDAQTRLLVAVLAEH 234
>gi|254231998|ref|ZP_04925325.1| hypothetical protein TBCG_01769 [Mycobacterium tuberculosis C]
gi|308231947|ref|ZP_07414370.2| transcriptional regulator [Mycobacterium tuberculosis SUMu001]
gi|308369531|ref|ZP_07418153.2| transcriptional regulator [Mycobacterium tuberculosis SUMu002]
26 more sequence titles
Length=228
Score = 450 bits (1158), Expect = 6e-125, Method: Compositional matrix adjust.
Identities = 227/228 (99%), Positives = 228/228 (100%), Gaps = 0/228 (0%)
Query 7 VGKRRDAREQIEAKIVELGRRQLLDHGAAGLSLRAIARNLGMVSSAVYRYVSSRDELLTL 66
+GKRRDAREQIEAKIVELGRRQLLDHGAAGLSLRAIARNLGMVSSAVYRYVSSRDELLTL
Sbjct 1 MGKRRDAREQIEAKIVELGRRQLLDHGAAGLSLRAIARNLGMVSSAVYRYVSSRDELLTL 60
Query 67 LLVDAYSDLADTVDRARDDTVADSWSDDVIAIARAVRGWAVTNPARWALLYGSPVPGYHA 126
LLVDAYSDLADTVDRARDDTVADSWSDDVIAIARAVRGWAVTNPARWALLYGSPVPGYHA
Sbjct 61 LLVDAYSDLADTVDRARDDTVADSWSDDVIAIARAVRGWAVTNPARWALLYGSPVPGYHA 120
Query 127 PPDRTAGVATRVVGAFFDAIAAGIATGDIRLTDDVAPQPMSSDFEKIRQEFGFPGDDRVV 186
PPDRTAGVATRVVGAFFDAIAAGIATGDIRLTDDVAPQPMSSDFEKIRQEFGFPGDDRVV
Sbjct 121 PPDRTAGVATRVVGAFFDAIAAGIATGDIRLTDDVAPQPMSSDFEKIRQEFGFPGDDRVV 180
Query 187 TKCFLLWAGVVGAISLEVFGQYGADMLTDPGVVFDAQTRLLVAVLAEH 234
TKCFLLWAGVVGAISLEVFGQYGADMLTDPGVVFDAQTRLLVAVLAEH
Sbjct 181 TKCFLLWAGVVGAISLEVFGQYGADMLTDPGVVFDAQTRLLVAVLAEH 228
>gi|342861284|ref|ZP_08717932.1| TetR family transcriptional regulator [Mycobacterium colombiense
CECT 3035]
gi|342131184|gb|EGT84465.1| TetR family transcriptional regulator [Mycobacterium colombiense
CECT 3035]
Length=233
Score = 379 bits (974), Expect = 1e-103, Method: Compositional matrix adjust.
Identities = 189/234 (81%), Positives = 208/234 (89%), Gaps = 1/234 (0%)
Query 1 LCQTCRVGKRRDAREQIEAKIVELGRRQLLDHGAAGLSLRAIARNLGMVSSAVYRYVSSR 60
+CQT RVGKR+++REQIEA+I+ELG RQL + GAAGLS+RAIAR+LGMVSSAVYRYVSSR
Sbjct 1 MCQTDRVGKRQESREQIEARIIELGHRQLSERGAAGLSVRAIARDLGMVSSAVYRYVSSR 60
Query 61 DELLTLLLVDAYSDLADTVDRARDDTVADSWSDDVIAIARAVRGWAVTNPARWALLYGSP 120
DELLTLLLVDAYSDLAD VDRAR TV D WSDDV+AIARA RGWAV +PA WALLYGSP
Sbjct 61 DELLTLLLVDAYSDLADAVDRARA-TVGDLWSDDVVAIARATRGWAVAHPACWALLYGSP 119
Query 121 VPGYHAPPDRTAGVATRVVGAFFDAIAAGIATGDIRLTDDVAPQPMSSDFEKIRQEFGFP 180
VPGYHAPP+RT V TRVV A FDA+AAGIATGDIRLT+D+APQP SSDFE+IR EFGFP
Sbjct 120 VPGYHAPPERTVAVGTRVVAALFDAVAAGIATGDIRLTNDLAPQPTSSDFERIRHEFGFP 179
Query 181 GDDRVVTKCFLLWAGVVGAISLEVFGQYGADMLTDPGVVFDAQTRLLVAVLAEH 234
GDDRV+ KCFLLWAGV+GAISLEVFGQYGAD LTDP VFDAQ RLLV VL +H
Sbjct 180 GDDRVLAKCFLLWAGVLGAISLEVFGQYGADTLTDPEAVFDAQLRLLVDVLTQH 233
>gi|254823251|ref|ZP_05228252.1| hypothetical protein MintA_25199 [Mycobacterium intracellulare
ATCC 13950]
Length=233
Score = 377 bits (969), Expect = 5e-103, Method: Compositional matrix adjust.
Identities = 185/234 (80%), Positives = 210/234 (90%), Gaps = 1/234 (0%)
Query 1 LCQTCRVGKRRDAREQIEAKIVELGRRQLLDHGAAGLSLRAIARNLGMVSSAVYRYVSSR 60
+CQT RVGKR+ +REQIEA+I+ELGRRQL++ GA GLS+RAIAR+LGMVSSAVYRYV+SR
Sbjct 1 MCQTDRVGKRQQSREQIEARIIELGRRQLVERGAPGLSVRAIARDLGMVSSAVYRYVASR 60
Query 61 DELLTLLLVDAYSDLADTVDRARDDTVADSWSDDVIAIARAVRGWAVTNPARWALLYGSP 120
DELLTLLLVDAYSDLADTV+RAR+ TV + WSDDVIAIARA R WAV +PA WALLYGSP
Sbjct 61 DELLTLLLVDAYSDLADTVERARE-TVGELWSDDVIAIARATRRWAVAHPACWALLYGSP 119
Query 121 VPGYHAPPDRTAGVATRVVGAFFDAIAAGIATGDIRLTDDVAPQPMSSDFEKIRQEFGFP 180
VPGYHAPP+RT V TRVV A FDA+A+GIATGDIRLT+D+APQPMSSDFE+IR EFGFP
Sbjct 120 VPGYHAPPERTVAVGTRVVAALFDAVASGIATGDIRLTNDLAPQPMSSDFERIRHEFGFP 179
Query 181 GDDRVVTKCFLLWAGVVGAISLEVFGQYGADMLTDPGVVFDAQTRLLVAVLAEH 234
GDD+V+ KCFLLWAGV+GAISLEVFGQYGAD LTDP +FD Q RLLV VLA+H
Sbjct 180 GDDQVLAKCFLLWAGVLGAISLEVFGQYGADTLTDPEAIFDTQVRLLVDVLAQH 233
>gi|240173103|ref|ZP_04751761.1| putative transcriptional regulatory protein [Mycobacterium kansasii
ATCC 12478]
Length=228
Score = 374 bits (961), Expect = 5e-102, Method: Compositional matrix adjust.
Identities = 187/228 (83%), Positives = 205/228 (90%), Gaps = 0/228 (0%)
Query 7 VGKRRDAREQIEAKIVELGRRQLLDHGAAGLSLRAIARNLGMVSSAVYRYVSSRDELLTL 66
+GKR++ARE IEAKIVELGRR L+DHGAAGLSLRAIAR+LGMVSSAVYRYVSSRDELLTL
Sbjct 1 MGKRQEAREHIEAKIVELGRRHLVDHGAAGLSLRAIARDLGMVSSAVYRYVSSRDELLTL 60
Query 67 LLVDAYSDLADTVDRARDDTVADSWSDDVIAIARAVRGWAVTNPARWALLYGSPVPGYHA 126
LLVDAYSDLADTVDRAR + DSWS+DVIAIA AVR WAV +PA+WALLYGSPVPGYHA
Sbjct 61 LLVDAYSDLADTVDRARAEAGLDSWSEDVIAIAHAVRRWAVAHPAQWALLYGSPVPGYHA 120
Query 127 PPDRTAGVATRVVGAFFDAIAAGIATGDIRLTDDVAPQPMSSDFEKIRQEFGFPGDDRVV 186
PP+RT GV TRVV AFFDAIA IATGDI LT++VA QPMSSDFE++R+EF FPGDDRVV
Sbjct 121 PPERTVGVGTRVVRAFFDAIAPAIATGDIILTNNVASQPMSSDFERLRREFDFPGDDRVV 180
Query 187 TKCFLLWAGVVGAISLEVFGQYGADMLTDPGVVFDAQTRLLVAVLAEH 234
KCFLLWA VVGAISLEVFGQYGAD LT+PG VFD+Q RLLV VLA+H
Sbjct 181 AKCFLLWAAVVGAISLEVFGQYGADTLTEPGQVFDSQIRLLVDVLAQH 228
>gi|41407626|ref|NP_960462.1| hypothetical protein MAP1528 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41395979|gb|AAS03845.1| hypothetical protein MAP_1528 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|336457578|gb|EGO36583.1| transcriptional regulator [Mycobacterium avium subsp. paratuberculosis
S397]
Length=233
Score = 374 bits (959), Expect = 9e-102, Method: Compositional matrix adjust.
Identities = 187/234 (80%), Positives = 204/234 (88%), Gaps = 1/234 (0%)
Query 1 LCQTCRVGKRRDAREQIEAKIVELGRRQLLDHGAAGLSLRAIARNLGMVSSAVYRYVSSR 60
+CQT RVGKR+ +REQIEA+I+ELGRRQL+D GAAGLS+RAIAR+LGMVSSAVYRYVSSR
Sbjct 1 MCQTDRVGKRQQSREQIEARIIELGRRQLVDRGAAGLSVRAIARDLGMVSSAVYRYVSSR 60
Query 61 DELLTLLLVDAYSDLADTVDRARDDTVADSWSDDVIAIARAVRGWAVTNPARWALLYGSP 120
DELLTLLLVDAYSDLADTVDRAR+ T + WSDDVIAIARA R WAV +PA WALLYGSP
Sbjct 61 DELLTLLLVDAYSDLADTVDRARE-TAGEQWSDDVIAIARATRRWAVEHPACWALLYGSP 119
Query 121 VPGYHAPPDRTAGVATRVVGAFFDAIAAGIATGDIRLTDDVAPQPMSSDFEKIRQEFGFP 180
VPGYHAPP+RT TRVV A FDA+AAGI TGDIRLT+D APQPMSSDFE+IR EFGFP
Sbjct 120 VPGYHAPPERTVAAGTRVVAALFDAVAAGITTGDIRLTNDPAPQPMSSDFERIRHEFGFP 179
Query 181 GDDRVVTKCFLLWAGVVGAISLEVFGQYGADMLTDPGVVFDAQTRLLVAVLAEH 234
GDD V+ KCFLLWAGV+GAISLEVFGQYGAD LTD VFDAQ RLLV VL H
Sbjct 180 GDDLVIAKCFLLWAGVLGAISLEVFGQYGADTLTDVEAVFDAQLRLLVDVLTRH 233
>gi|254775375|ref|ZP_05216891.1| hypothetical protein MaviaA2_11991 [Mycobacterium avium subsp.
avium ATCC 25291]
Length=233
Score = 371 bits (952), Expect = 5e-101, Method: Compositional matrix adjust.
Identities = 185/234 (80%), Positives = 203/234 (87%), Gaps = 1/234 (0%)
Query 1 LCQTCRVGKRRDAREQIEAKIVELGRRQLLDHGAAGLSLRAIARNLGMVSSAVYRYVSSR 60
+CQT RVGKR+ +REQ+EA+I+ELGRRQL+D GAAGLS+RAIAR+LGMVSSAVYRYVSSR
Sbjct 1 MCQTDRVGKRQQSREQVEARIIELGRRQLVDRGAAGLSVRAIARDLGMVSSAVYRYVSSR 60
Query 61 DELLTLLLVDAYSDLADTVDRARDDTVADSWSDDVIAIARAVRGWAVTNPARWALLYGSP 120
DELLTLLLVDAYSDLADTVDRAR+ + WSDDVIAIARA R WAV +PA WALLYGSP
Sbjct 61 DELLTLLLVDAYSDLADTVDRARE-AAGEQWSDDVIAIARATRRWAVEHPACWALLYGSP 119
Query 121 VPGYHAPPDRTAGVATRVVGAFFDAIAAGIATGDIRLTDDVAPQPMSSDFEKIRQEFGFP 180
VPGYHAPP+RT TRVV A FDA+AAGI TGDIRLT+D APQPMSSDFE+IR EFGFP
Sbjct 120 VPGYHAPPERTVAAGTRVVAALFDAVAAGITTGDIRLTNDPAPQPMSSDFERIRHEFGFP 179
Query 181 GDDRVVTKCFLLWAGVVGAISLEVFGQYGADMLTDPGVVFDAQTRLLVAVLAEH 234
GDD V+ KCFLLWAGV+GAISLEVFGQYGAD LTD VFDAQ RLLV VL H
Sbjct 180 GDDLVIAKCFLLWAGVLGAISLEVFGQYGADTLTDVEAVFDAQLRLLVDVLTRH 233
>gi|296164801|ref|ZP_06847361.1| TetR-family transcriptional regulator [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295899855|gb|EFG79301.1| TetR-family transcriptional regulator [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=233
Score = 366 bits (939), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 193/234 (83%), Positives = 211/234 (91%), Gaps = 1/234 (0%)
Query 1 LCQTCRVGKRRDAREQIEAKIVELGRRQLLDHGAAGLSLRAIARNLGMVSSAVYRYVSSR 60
+CQT RVGKR+++REQIE++IVELGRRQL+D GAAGLS+RAIAR+LGMVSSAVYRYV+SR
Sbjct 1 MCQTDRVGKRQESREQIESRIVELGRRQLVDRGAAGLSVRAIARDLGMVSSAVYRYVASR 60
Query 61 DELLTLLLVDAYSDLADTVDRARDDTVADSWSDDVIAIARAVRGWAVTNPARWALLYGSP 120
DELLTLLLVDAYSDLAD VDRARD + WSDDVIAIARA R WAV +P+RWALLYGSP
Sbjct 61 DELLTLLLVDAYSDLADAVDRARD-AADELWSDDVIAIARATRQWAVAHPSRWALLYGSP 119
Query 121 VPGYHAPPDRTAGVATRVVGAFFDAIAAGIATGDIRLTDDVAPQPMSSDFEKIRQEFGFP 180
VPGYHAPP+RT V TRVV AFFDA+AAGIATGDIRLTD VAPQPMSSDFE+IR EFGFP
Sbjct 120 VPGYHAPPERTVSVGTRVVAAFFDAVAAGIATGDIRLTDTVAPQPMSSDFERIRHEFGFP 179
Query 181 GDDRVVTKCFLLWAGVVGAISLEVFGQYGADMLTDPGVVFDAQTRLLVAVLAEH 234
GDDRVV KCFLLWAGV+GAISLEVFGQYGAD LTDP VFDAQ RLLV VLA+H
Sbjct 180 GDDRVVAKCFLLWAGVLGAISLEVFGQYGADTLTDPEAVFDAQLRLLVDVLAQH 233
>gi|118466308|ref|YP_882085.1| TetR family transcriptional regulator [Mycobacterium avium 104]
gi|118167595|gb|ABK68492.1| transcriptional regulator, TetR family protein [Mycobacterium
avium 104]
Length=227
Score = 363 bits (931), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 182/228 (80%), Positives = 199/228 (88%), Gaps = 1/228 (0%)
Query 7 VGKRRDAREQIEAKIVELGRRQLLDHGAAGLSLRAIARNLGMVSSAVYRYVSSRDELLTL 66
+GKR+ +REQIEA+I+ELGRRQL+D GAAGLS+RAIAR+LGMVSSAVYRYVSSRDELLTL
Sbjct 1 MGKRQQSREQIEARIIELGRRQLVDRGAAGLSVRAIARDLGMVSSAVYRYVSSRDELLTL 60
Query 67 LLVDAYSDLADTVDRARDDTVADSWSDDVIAIARAVRGWAVTNPARWALLYGSPVPGYHA 126
LLVDAYSDLADTVDRAR+ T + WSDDVIAIARA R WAV +PA WALLYGSPVPGYHA
Sbjct 61 LLVDAYSDLADTVDRARE-TAGEQWSDDVIAIARATRRWAVEHPACWALLYGSPVPGYHA 119
Query 127 PPDRTAGVATRVVGAFFDAIAAGIATGDIRLTDDVAPQPMSSDFEKIRQEFGFPGDDRVV 186
PP+RT TRVV A FDA+AAGI TGDIRLT+D APQPMSSDFE+IR EFGFPGDD V+
Sbjct 120 PPERTVAAGTRVVAALFDAVAAGITTGDIRLTNDPAPQPMSSDFERIRHEFGFPGDDLVI 179
Query 187 TKCFLLWAGVVGAISLEVFGQYGADMLTDPGVVFDAQTRLLVAVLAEH 234
KCFLLWAGV+GAISLEVFGQYGAD LTD VFDAQ RLLV VL H
Sbjct 180 AKCFLLWAGVLGAISLEVFGQYGADTLTDVEAVFDAQLRLLVDVLTRH 227
>gi|333992552|ref|YP_004525166.1| transcriptional regulator [Mycobacterium sp. JDM601]
gi|333488520|gb|AEF37912.1| transcriptional regulatory protein [Mycobacterium sp. JDM601]
Length=228
Score = 298 bits (764), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 151/227 (67%), Positives = 181/227 (80%), Gaps = 2/227 (0%)
Query 7 VGKRRDAREQIEAKIVELGRRQLLDHGAAGLSLRAIARNLGMVSSAVYRYVSSRDELLTL 66
+GKR++ARE+IEAKI+E+GRRQLL HGAAGLSLRA+AR+LGMVSSAVYRYV+ RDELLTL
Sbjct 1 MGKRQEARERIEAKIIEVGRRQLLAHGAAGLSLRAVARDLGMVSSAVYRYVAGRDELLTL 60
Query 67 LLVDAYSDLADTVDRARDDTVADSWSDDVIAIARAVRGWAVTNPARWALLYGSPVPGYHA 126
L+VDAYSDLADTVDRAR + W D++ I AVR WA+ +PARWALLYGSPVPGYHA
Sbjct 61 LVVDAYSDLADTVDRAR--SPGARWRDEIRVIGHAVRDWALAHPARWALLYGSPVPGYHA 118
Query 127 PPDRTAGVATRVVGAFFDAIAAGIATGDIRLTDDVAPQPMSSDFEKIRQEFGFPGDDRVV 186
P +RT TRV+ A + +AAGIA GDI T +A QP+S+D ++IR EFGF GDD V+
Sbjct 119 PAERTVVPGTRVIAAMLETVAAGIAAGDIPPTSQLATQPLSADSDRIRAEFGFIGDDGVI 178
Query 187 TKCFLLWAGVVGAISLEVFGQYGADMLTDPGVVFDAQTRLLVAVLAE 233
KC LLWA +VGAISL+VFG YGAD LT P VFDAQ LL+ +L +
Sbjct 179 AKCLLLWAALVGAISLDVFGGYGADTLTRPRAVFDAQLSLLLGMLTQ 225
>gi|120404146|ref|YP_953975.1| TetR family transcriptional regulator [Mycobacterium vanbaalenii
PYR-1]
gi|119956964|gb|ABM13969.1| transcriptional regulator, TetR family [Mycobacterium vanbaalenii
PYR-1]
Length=236
Score = 295 bits (755), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 147/228 (65%), Positives = 175/228 (77%), Gaps = 1/228 (0%)
Query 1 LCQTCRVGKRRDAREQIEAKIVELGRRQLLDHGAAGLSLRAIARNLGMVSSAVYRYVSSR 60
+C T RVGKR+D R++IE +IVE+GR L+ HGAA LSLRAIAR LGMVSSAVYRYV+SR
Sbjct 1 MCDTGRVGKRQDTRDRIERQIVEIGRAHLVTHGAAALSLRAIARELGMVSSAVYRYVASR 60
Query 61 DELLTLLLVDAYSDLADTVDRARDDTVADSWSDDVIAIARAVRGWAVTNPARWALLYGSP 120
DELLTLLLVDAY +LAD+V+RARD D W D + A+A A R WAV +PARWALLYGSP
Sbjct 61 DELLTLLLVDAYGELADSVERARDAAAGD-WQDRLRAVAHATRAWAVHHPARWALLYGSP 119
Query 121 VPGYHAPPDRTAGVATRVVGAFFDAIAAGIATGDIRLTDDVAPQPMSSDFEKIRQEFGFP 180
VPGYHAP ++T G TRVVG F AIA G+A G +R + PQ +SSDF+++R EF F
Sbjct 120 VPGYHAPREQTVGPGTRVVGLLFSAIAEGVAAGAVRTSKVTVPQSLSSDFDRLRAEFEFV 179
Query 181 GDDRVVTKCFLLWAGVVGAISLEVFGQYGADMLTDPGVVFDAQTRLLV 228
DD VV +C +LWA +VGAISLEVFGQYGAD D VVFDAQ L++
Sbjct 180 ADDDVVARCLVLWAALVGAISLEVFGQYGADTFADASVVFDAQMDLVI 227
>gi|145224000|ref|YP_001134678.1| TetR family transcriptional regulator [Mycobacterium gilvum PYR-GCK]
gi|145216486|gb|ABP45890.1| transcriptional regulator, TetR family [Mycobacterium gilvum
PYR-GCK]
Length=226
Score = 282 bits (721), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 139/227 (62%), Positives = 170/227 (75%), Gaps = 1/227 (0%)
Query 7 VGKRRDAREQIEAKIVELGRRQLLDHGAAGLSLRAIARNLGMVSSAVYRYVSSRDELLTL 66
+GKR+D RE+IE IV +GRR L+ GAAGLSLRAIAR+LGMVSSAVYRYV+SRDELLTL
Sbjct 1 MGKRQDTRERIERDIVAIGRRHLVTEGAAGLSLRAIARDLGMVSSAVYRYVASRDELLTL 60
Query 67 LLVDAYSDLADTVDRARDDTVADSWSDDVIAIARAVRGWAVTNPARWALLYGSPVPGYHA 126
LLVDAY+DLADTV+ AR + D W + + A+ A+R WAV PA WALLYGSPVPGYHA
Sbjct 61 LLVDAYTDLADTVETARAASTGD-WREQLRALGHAIRAWAVRQPASWALLYGSPVPGYHA 119
Query 127 PPDRTAGVATRVVGAFFDAIAAGIATGDIRLTDDVAPQPMSSDFEKIRQEFGFPGDDRVV 186
P DRT TRVV A FD ++AGIA GDI + APQP+S DF+++R++FGF GDD ++
Sbjct 120 PRDRTVTPGTRVVAALFDVVSAGIAAGDIASGEHPAPQPLSGDFDRLREQFGFAGDDVLL 179
Query 187 TKCFLLWAGVVGAISLEVFGQYGADMLTDPGVVFDAQTRLLVAVLAE 233
KC LWA ++GA+ LEVFGQYG D DP + FD Q L +L +
Sbjct 180 GKCLTLWAALIGAVGLEVFGQYGPDTFADPALAFDTQIAALTEMLCQ 226
>gi|315444332|ref|YP_004077211.1| TetR family transcriptional regulator [Mycobacterium sp. Spyr1]
gi|315262635|gb|ADT99376.1| transcriptional regulator, TetR family [Mycobacterium sp. Spyr1]
Length=226
Score = 281 bits (718), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 138/227 (61%), Positives = 169/227 (75%), Gaps = 1/227 (0%)
Query 7 VGKRRDAREQIEAKIVELGRRQLLDHGAAGLSLRAIARNLGMVSSAVYRYVSSRDELLTL 66
+GKR+D RE+IE I+ +GRR L+ GAAGLSLRAIAR+LGMVSSAVYRYV+SRDELLTL
Sbjct 1 MGKRQDTRERIERDIIAIGRRHLVTEGAAGLSLRAIARDLGMVSSAVYRYVASRDELLTL 60
Query 67 LLVDAYSDLADTVDRARDDTVADSWSDDVIAIARAVRGWAVTNPARWALLYGSPVPGYHA 126
LLVDAY+DLADTV+ AR + D W + A+ A+R WAV PA WALLYGSPVPGYHA
Sbjct 61 LLVDAYTDLADTVETARAASTGD-WRQQLSALGHAIRAWAVRQPASWALLYGSPVPGYHA 119
Query 127 PPDRTAGVATRVVGAFFDAIAAGIATGDIRLTDDVAPQPMSSDFEKIRQEFGFPGDDRVV 186
P DRT TRVV A FD ++AGIA GDI + APQP+S DF+++R++FGF GDD ++
Sbjct 120 PRDRTVTPGTRVVAALFDVVSAGIAAGDITSGERPAPQPLSGDFDRLREQFGFTGDDVLL 179
Query 187 TKCFLLWAGVVGAISLEVFGQYGADMLTDPGVVFDAQTRLLVAVLAE 233
KC LWA ++GA+ LEVFGQYG D DP + FD Q L +L +
Sbjct 180 GKCLTLWAALIGAVGLEVFGQYGPDTFADPALAFDTQIAALTEMLCQ 226
>gi|108799824|ref|YP_640021.1| TetR family transcriptional regulator [Mycobacterium sp. MCS]
gi|119868934|ref|YP_938886.1| TetR family transcriptional regulator [Mycobacterium sp. KMS]
gi|108770243|gb|ABG08965.1| transcriptional regulator, TetR family [Mycobacterium sp. MCS]
gi|119695023|gb|ABL92096.1| transcriptional regulator, TetR family [Mycobacterium sp. KMS]
Length=217
Score = 257 bits (657), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 138/216 (64%), Positives = 160/216 (75%), Gaps = 3/216 (1%)
Query 17 IEAKIVELGRRQLLDHGAAGLSLRAIARNLGMVSSAVYRYVSSRDELLTLLLVDAYSDLA 76
+EA+I+E+GRR L+ G AGLSLRAIAR+LG+VSSAVYRYVSSRDELLTLLLVDAYS+LA
Sbjct 1 MEARIIEVGRRHLITDGPAGLSLRAIARDLGVVSSAVYRYVSSRDELLTLLLVDAYSELA 60
Query 77 DTVDRARDDTVADSWSDDVIAIARAVRGWAVTNPARWALLYGSPVPGYHAPPDRTAGVAT 136
VD A D W ++ +A A R WAV+ PARWALLYGSPVPGY AP +RT G T
Sbjct 61 ARVDDAATAGEPD-WRTQILRMAHAAREWAVSQPARWALLYGSPVPGYRAPAERTTGPGT 119
Query 137 RVVGAFFDAIAAGIATGDI-RLTDDVAPQPMSSDFEKIRQEFGFPGDDRVVTKCFLLWAG 195
RVV A F A+A GIA GDI L DDV P+ +S+DFE +RQEF F G D V K LWAG
Sbjct 120 RVVAALFRAVADGIAAGDIFELKDDV-PESLSTDFEGLRQEFDFSGGDGAVAKTLTLWAG 178
Query 196 VVGAISLEVFGQYGADMLTDPGVVFDAQTRLLVAVL 231
++GAISLEVFGQ+GAD TDP VFD R LV +L
Sbjct 179 LIGAISLEVFGQHGADTFTDPKTVFDLHIRALVELL 214
>gi|118469001|ref|YP_887962.1| TetR family transcriptional regulator [Mycobacterium smegmatis
str. MC2 155]
gi|118170288|gb|ABK71184.1| TetR-family protein transcriptional regulator [Mycobacterium
smegmatis str. MC2 155]
Length=229
Score = 248 bits (633), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 138/227 (61%), Positives = 168/227 (75%), Gaps = 2/227 (0%)
Query 7 VGKRRDAREQIEAKIVELGRRQLLDHGAAGLSLRAIARNLGMVSSAVYRYVSSRDELLTL 66
+GKR+++RE+IEA IVE+GR+ L+ GAAGLS+RA+AR+LGMVSSAVYRYV+SRDELLTL
Sbjct 1 MGKRQESRERIEAAIVEIGRQHLVTEGAAGLSMRAVARDLGMVSSAVYRYVASRDELLTL 60
Query 67 LLVDAYSDLADTVDRARDDTVADS--WSDDVIAIARAVRGWAVTNPARWALLYGSPVPGY 124
L+VDAY++LAD V A D A W + AIA A R WA+ PARWALLYGSPVPGY
Sbjct 61 LVVDAYTELADAVAAAVADVSAAGARWRSQIRAIAHATRNWALDQPARWALLYGSPVPGY 120
Query 125 HAPPDRTAGVATRVVGAFFDAIAAGIATGDIRLTDDVAPQPMSSDFEKIRQEFGFPGDDR 184
HAP +RT TRVV A F A+A GIA GDI T++ QP+S DF ++R EFG DD
Sbjct 121 HAPAERTVVPGTRVVVALFAAVARGIAEGDIPATEETVAQPLSGDFARLRAEFGLHVDDA 180
Query 185 VVTKCFLLWAGVVGAISLEVFGQYGADMLTDPGVVFDAQTRLLVAVL 231
+ +CF LWAG++GA+SLEVFGQYGAD LTDP +FD Q L L
Sbjct 181 TMARCFALWAGLIGAVSLEVFGQYGADTLTDPRQLFDLQIDSLTGAL 227
>gi|126435467|ref|YP_001071158.1| TetR family transcriptional regulator [Mycobacterium sp. JLS]
gi|126235267|gb|ABN98667.1| transcriptional regulator, TetR family [Mycobacterium sp. JLS]
Length=217
Score = 235 bits (600), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 135/218 (62%), Positives = 156/218 (72%), Gaps = 1/218 (0%)
Query 17 IEAKIVELGRRQLLDHGAAGLSLRAIARNLGMVSSAVYRYVSSRDELLTLLLVDAYSDLA 76
+EA+I+E+GRR L+ G AGLSLRAIAR+LG+VSSAVYRYVSSRD+LLTLLLVDAYS+LA
Sbjct 1 MEARIIEVGRRHLITDGPAGLSLRAIARDLGVVSSAVYRYVSSRDDLLTLLLVDAYSELA 60
Query 77 DTVDRARDDTVADSWSDDVIAIARAVRGWAVTNPARWALLYGSPVPGYHAPPDRTAGVAT 136
VD A D W ++ +A A R WAV+ PARWALLYGSPVPGY AP +RT T
Sbjct 61 ARVDDAATAGEPD-WRTQILRMAHAAREWAVSQPARWALLYGSPVPGYRAPAERTTEPGT 119
Query 137 RVVGAFFDAIAAGIATGDIRLTDDVAPQPMSSDFEKIRQEFGFPGDDRVVTKCFLLWAGV 196
RVV A F A+A GIA GDI P +S+DFE +RQEF F G D V K LWAG+
Sbjct 120 RVVAALFRAVADGIAAGDISGLKSDVPDSLSADFEGLRQEFDFSGGDGAVAKTLTLWAGL 179
Query 197 VGAISLEVFGQYGADMLTDPGVVFDAQTRLLVAVLAEH 234
+GAISLEVFGQYGAD TDP VFD R LV +LA H
Sbjct 180 IGAISLEVFGQYGADTFTDPKTVFDLHIRALVELLASH 217
>gi|325677340|ref|ZP_08157005.1| TetR-family transcriptional regulator [Rhodococcus equi ATCC
33707]
gi|325551803|gb|EGD21500.1| TetR-family transcriptional regulator [Rhodococcus equi ATCC
33707]
Length=230
Score = 210 bits (534), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 111/225 (50%), Positives = 145/225 (65%), Gaps = 0/225 (0%)
Query 7 VGKRRDAREQIEAKIVELGRRQLLDHGAAGLSLRAIARNLGMVSSAVYRYVSSRDELLTL 66
V R AREQ A+I +GR L HGAA LSLRA+AR+LG+VSSAVYRYV+SRDELLTL
Sbjct 3 VTPRERAREQTLAEITRIGREHLATHGAAALSLRAVARDLGVVSSAVYRYVASRDELLTL 62
Query 67 LLVDAYSDLADTVDRARDDTVADSWSDDVIAIARAVRGWAVTNPARWALLYGSPVPGYHA 126
L++DAY++L VD A D + A+ARAVR WA+ PAR+ALL+GSPVPGYHA
Sbjct 63 LVIDAYTELGAEVDAAVGALPVDDHRGRLHALARAVRAWALREPARYALLFGSPVPGYHA 122
Query 127 PPDRTAGVATRVVGAFFDAIAAGIATGDIRLTDDVAPQPMSSDFEKIRQEFGFPGDDRVV 186
P +RT G TRV+ A I G + + D+ +S+D ++IR E D V+
Sbjct 123 PAERTTGPGTRVIVALVGLIEDAQRVGALTVPDEAVDPVLSADLDRIRAEMELTVSDAVL 182
Query 187 TKCFLLWAGVVGAISLEVFGQYGADMLTDPGVVFDAQTRLLVAVL 231
+ L+WA + GA++ EVFGQYGAD TDP +F+ +L +L
Sbjct 183 ARGVLVWAALFGAVNFEVFGQYGADTFTDPAALFEHHLAVLDQIL 227
>gi|312141997|ref|YP_004009333.1| tetr family transcriptional regulator [Rhodococcus equi 103S]
gi|311891336|emb|CBH50657.1| putative TetR family transcriptional regulator [Rhodococcus equi
103S]
Length=230
Score = 209 bits (531), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 110/225 (49%), Positives = 145/225 (65%), Gaps = 0/225 (0%)
Query 7 VGKRRDAREQIEAKIVELGRRQLLDHGAAGLSLRAIARNLGMVSSAVYRYVSSRDELLTL 66
V R AREQ A+I +GR L HGAA LSLRA+AR+LG+VSSAVYRYV+SRDELLTL
Sbjct 3 VTPRERAREQTLAEITRIGREHLATHGAAALSLRAVARDLGVVSSAVYRYVASRDELLTL 62
Query 67 LLVDAYSDLADTVDRARDDTVADSWSDDVIAIARAVRGWAVTNPARWALLYGSPVPGYHA 126
L++DAY++L VD A D + A+ARAVR WA+ PAR+ALL+GSPVPGYHA
Sbjct 63 LVIDAYTELGAEVDAAVGALPVDDHRGRLHALARAVRAWALREPARYALLFGSPVPGYHA 122
Query 127 PPDRTAGVATRVVGAFFDAIAAGIATGDIRLTDDVAPQPMSSDFEKIRQEFGFPGDDRVV 186
P +RT G TRV+ A I G + + D+ +S+D ++IR E D ++
Sbjct 123 PAERTTGPGTRVIVALVGLIEDAQRVGALTVPDEAVDPVLSADLDRIRAEMELTVSDALL 182
Query 187 TKCFLLWAGVVGAISLEVFGQYGADMLTDPGVVFDAQTRLLVAVL 231
+ L+WA + GA++ EVFGQYGAD TDP +F+ +L +L
Sbjct 183 ARGVLVWAALFGAVNFEVFGQYGADTFTDPAALFEHHLAVLDQIL 227
>gi|262202897|ref|YP_003274105.1| TetR family transcriptional regulator [Gordonia bronchialis DSM
43247]
gi|262086244|gb|ACY22212.1| regulatory protein TetR [Gordonia bronchialis DSM 43247]
Length=230
Score = 207 bits (526), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 112/214 (53%), Positives = 138/214 (65%), Gaps = 0/214 (0%)
Query 10 RRDAREQIEAKIVELGRRQLLDHGAAGLSLRAIARNLGMVSSAVYRYVSSRDELLTLLLV 69
R + R +EA+I LGR L HGAAGLSLRAIAR+LG+VSSAVYRYV SRD+LLT L+V
Sbjct 7 RAENRATMEARIRRLGREHLSTHGAAGLSLRAIARDLGVVSSAVYRYVPSRDDLLTALVV 66
Query 70 DAYSDLADTVDRARDDTVADSWSDDVIAIARAVRGWAVTNPARWALLYGSPVPGYHAPPD 129
+AYSDLADTV+RA + D D + A R +R WAV +P RWALLYGSPVPGY AP +
Sbjct 67 EAYSDLADTVERAVTEHDPDRPHDRLFAACRTMRAWAVADPPRWALLYGSPVPGYAAPAE 126
Query 130 RTAGVATRVVGAFFDAIAAGIATGDIRLTDDVAPQPMSSDFEKIRQEFGFPGDDRVVTKC 189
+T G TRV+ +A + G + P +S DF IR EFG D +
Sbjct 127 QTVGPGTRVIAMVIGELARAESAGLLTPRARPVPVELSDDFGAIRTEFGSTISDDALLVA 186
Query 190 FLLWAGVVGAISLEVFGQYGADMLTDPGVVFDAQ 223
LW+ +GAI LEVFGQYG D + P ++FDAQ
Sbjct 187 TALWSTTIGAIGLEVFGQYGPDTFSAPELLFDAQ 220
>gi|220914362|ref|YP_002489671.1| TetR family transcriptional regulator [Arthrobacter chlorophenolicus
A6]
gi|219861240|gb|ACL41582.1| transcriptional regulator, TetR family [Arthrobacter chlorophenolicus
A6]
Length=261
Score = 189 bits (479), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 106/231 (46%), Positives = 134/231 (59%), Gaps = 3/231 (1%)
Query 3 QTCRVGKRRDAREQIEAKIVELGRRQLLDHGAAGLSLRAIARNLGMVSSAVYRYVSSRDE 62
Q R R AR Q IV LGR L GAAGLSLRA+AR+LG+VSSAVYRYV +RDE
Sbjct 23 QKRRQTPRERARAQTITDIVRLGREHLAVDGAAGLSLRAVARDLGVVSSAVYRYVENRDE 82
Query 63 LLTLLLVDAYSDLADTVDRARDDTVADSWSDDVIAIARAVRGWAVTNPARWALLYGSPVP 122
LLTLLL+DA+ +L D VD A + +A+ RAVR WA+ PA +ALL+GSPVP
Sbjct 83 LLTLLLIDAFGELGDEVDAAVGGVSEEDHGGQFLALGRAVRRWALREPASYALLFGSPVP 142
Query 123 GYHAPPDRTAGVATRVVGAFFDAIAAGIATGDIRLTDDVA---PQPMSSDFEKIRQEFGF 179
GY AP +RT G TRV+ + A G + A P + +D IR +FG
Sbjct 143 GYDAPAERTTGPGTRVIVRLVGILDAASRAGHLTAPGPKAVAVPTVLGADLAAIRNQFGL 202
Query 180 PGDDRVVTKCFLLWAGVVGAISLEVFGQYGADMLTDPGVVFDAQTRLLVAV 230
D +V + L+W+ V GA+S EVF QYG D + P +FD +L V
Sbjct 203 QMSDELVARGVLVWSAVFGAVSFEVFNQYGPDTFSAPAELFDHHLAVLCGV 253
>gi|343924223|ref|ZP_08763786.1| putative TetR family transcriptional regulator [Gordonia alkanivorans
NBRC 16433]
gi|343766028|dbj|GAA10712.1| putative TetR family transcriptional regulator [Gordonia alkanivorans
NBRC 16433]
Length=230
Score = 187 bits (476), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 111/226 (50%), Positives = 137/226 (61%), Gaps = 6/226 (2%)
Query 9 KRRDAREQIEAKIVELGRRQLLDHGAAGLSLRAIARNLGMVSSAVYRYVSSRDELLTLLL 68
R + R + +I LGR L HGAAGLSLRAIAR +G+VSSAVYRYV SRD+LLT+LL
Sbjct 6 SRAENRAMMTDEIRRLGREHLATHGAAGLSLRAIAREMGVVSSAVYRYVPSRDDLLTMLL 65
Query 69 VDAYSDLADTVDRARDDTVADSWSDDVIAIARAVRGWAVTNPARWALLYGSPVPGYHAPP 128
V+AY+D+ D +D A + V+A A A R WA+ +PARWALLYGSPVPGY AP
Sbjct 66 VEAYNDVGDAIDAAVSAIEPSRRRERVLAAAEAARDWALDDPARWALLYGSPVPGYAAPG 125
Query 129 DRTAGVATRVVGAFFDAIAAGIATGDIRLTDDVAPQP---MSSDFEKIRQEFGFPGDDRV 185
+ T TR+ AA A G IR DD+ P P ++ D IR EFG D V
Sbjct 126 EETMVPGTRIPALLLRECAAAHAEGLIR--DDL-PTPTTGVAGDMAAIRDEFGIDAPDAV 182
Query 186 VTKCFLLWAGVVGAISLEVFGQYGADMLTDPGVVFDAQTRLLVAVL 231
+ LWA +VGAISLE FGQYG D P +F +Q L ++ L
Sbjct 183 LAASTTLWAALVGAISLEAFGQYGKDTFAHPAELFRSQIELTLSSL 228
>gi|111020620|ref|YP_703592.1| TetR family transcriptional regulator [Rhodococcus jostii RHA1]
gi|110820150|gb|ABG95434.1| possible transcriptional regulator, TetR family protein [Rhodococcus
jostii RHA1]
Length=231
Score = 183 bits (464), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 107/229 (47%), Positives = 142/229 (63%), Gaps = 15/229 (6%)
Query 10 RRDAREQIEAKIVELGRRQLLDHGAAGLSLRAIARNLGMVSSAVYRYVSSRDELLTLLLV 69
R AREQ I +GR QL GAA LSLRA+AR+LG+VSSAVYRYV SRDELLTLL+V
Sbjct 6 RERAREQTLQDITRIGREQLAAVGAAALSLRAVARDLGVVSSAVYRYVKSRDELLTLLVV 65
Query 70 DAYSDLADTVDRARDDTVADSWSDDVIAIARAVRGWAVTNPARWALLYGSPVPGYHAPPD 129
D Y++L D + A + +A+ RAVR WA+ PAR+ LL+GSPVPGYHAP +
Sbjct 66 DGYNELGDAAEAAVASAAEP--REQFLALGRAVREWALHEPARYGLLFGSPVPGYHAPGE 123
Query 130 RTAGVATRV----VGAFFDAIAAG-IATGDIRLTDDVAPQPMSSDFEKIRQEFGFPGDDR 184
+T TRV VG F +A AG + DD +++D ++IR E G D
Sbjct 124 QTTTPGTRVIYALVGIFDNAFRAGKLEAAAAAPIDD----ELAADLDRIRSELGLTTPDH 179
Query 185 VVTKCFLLWAGVVGAISLEVFGQYGADMLTDPGVVFDAQTRLLVAVLAE 233
++ + L+W+ + GA++ EVFGQYGAD T PG +++ +AVLAE
Sbjct 180 LLARGVLVWSALFGAVNFEVFGQYGADTFTTPGALYEHH----LAVLAE 224
>gi|226309490|ref|YP_002769452.1| TetR family transcriptional regulator [Rhodococcus erythropolis
PR4]
gi|226188609|dbj|BAH36713.1| putative TetR family transcriptional regulator [Rhodococcus erythropolis
PR4]
Length=237
Score = 181 bits (460), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 103/225 (46%), Positives = 140/225 (63%), Gaps = 7/225 (3%)
Query 10 RRDAREQIEAKIVELGRRQLLDHGAAGLSLRAIARNLGMVSSAVYRYVSSRDELLTLLLV 69
R AREQ I +GR +L GAA LSLRA+AR+LG+VSSAVYRYV+SRDELLTLL+V
Sbjct 12 RERAREQTLQDITRIGRERLAAVGAAALSLRAVARDLGVVSSAVYRYVASRDELLTLLVV 71
Query 70 DAYSDLADTVDRARDDTVADSWSDDVIAIARAVRGWAVTNPARWALLYGSPVPGYHAPPD 129
D Y++L VD A + A+ + IA+ RAVR WA+ PAR+ LL+GSPVPGY AP +
Sbjct 72 DGYTELGAEVDSAVNAVAAEDFRGQFIALGRAVRSWAIREPARYGLLFGSPVPGYDAPGE 131
Query 130 RTAG----VATRVVGAFFDAIAAGIATGDIRLTDDVAPQPMSSDFEKIRQEFGFPGDDRV 185
+T G V TR++G A AG T +R D++ +++D E +R+E G
Sbjct 132 QTTGPGTLVVTRLIGIIDAAHRAGALT--VREGPDLS-DTLATDLEGVRKELGTELPPDA 188
Query 186 VTKCFLLWAGVVGAISLEVFGQYGADMLTDPGVVFDAQTRLLVAV 230
+ L+W + G+++ EVFGQYG+D TD +F+ LL V
Sbjct 189 AVRATLVWVSLFGSVNFEVFGQYGSDTFTDASEIFERHLALLADV 233
>gi|226362863|ref|YP_002780643.1| TetR family transcriptional regulator [Rhodococcus opacus B4]
gi|226241350|dbj|BAH51698.1| putative TetR family transcriptional regulator [Rhodococcus opacus
B4]
Length=231
Score = 180 bits (456), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 106/228 (47%), Positives = 141/228 (62%), Gaps = 13/228 (5%)
Query 10 RRDAREQIEAKIVELGRRQLLDHGAAGLSLRAIARNLGMVSSAVYRYVSSRDELLTLLLV 69
R AREQ I +GR QL G A LSLRA+AR+LG+VSSAVYRYV+SRDELLTLL+V
Sbjct 6 RERAREQTLQDITRIGREQLAAVGGAALSLRAVARDLGVVSSAVYRYVNSRDELLTLLVV 65
Query 70 DAYSDLADTVDRARDDTVADSWSDDVIAIARAVRGWAVTNPARWALLYGSPVPGYHAPPD 129
D Y++L D + A V + +A+ RAVR WA+ PAR+ LL+GSPVPGY AP +
Sbjct 66 DGYNELGDAAEAAVASAVEP--REQFLALGRAVREWALREPARYGLLFGSPVPGYQAPGE 123
Query 130 RTAGVATRV----VGAFFDAIAAGIATGDIRLTDDVAPQPMSSDFEKIRQEFGFPGDDRV 185
+T TRV VG F +A AG D D +++D +++R E G D +
Sbjct 124 QTTTPGTRVIYALVGIFDNAFRAGKLEADAAAPID---DRLAADLDRVRAELGLTTPDHL 180
Query 186 VTKCFLLWAGVVGAISLEVFGQYGADMLTDPGVVFDAQTRLLVAVLAE 233
+ + L+W+ + GA++ EVFGQYGAD T PG +F+ +AVLAE
Sbjct 181 LARGVLVWSALFGAVNFEVFGQYGADTFTTPGALFEHH----LAVLAE 224
>gi|116672352|ref|YP_833285.1| TetR family transcriptional regulator [Arthrobacter sp. FB24]
gi|116612461|gb|ABK05185.1| transcriptional regulator, TetR family [Arthrobacter sp. FB24]
Length=247
Score = 176 bits (446), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 106/229 (47%), Positives = 136/229 (60%), Gaps = 8/229 (3%)
Query 10 RRDAREQIEAKIVELGRRQLLDHGAAGLSLRAIARNLGMVSSAVYRYVSSRDELLTLLLV 69
R AR Q A IV LGR L HGAA LSLRA+AR LG+VSSAVYRYV SRDELLTLLL+
Sbjct 15 RERARAQTVADIVRLGREHLARHGAAALSLRAVARELGVVSSAVYRYVQSRDELLTLLLI 74
Query 70 DAYSDLADTVDRARDDTVADSWSDDVIAIARAVRGWAVTNPARWALLYGSPVPGYHAPPD 129
DAY +L D VD A ++ A+ RAVRGWA+ PAR+ALL+GSPVPGY AP +
Sbjct 75 DAYGELGDEVDAAVSRVAEGDFAGRFRALGRAVRGWALREPARYALLFGSPVPGYRAPAE 134
Query 130 RTAGVATRVVGAF-------FDAIAAGIATG-DIRLTDDVAPQPMSSDFEKIRQEFGFPG 181
RT TRVV + + A A G +G P +++D + IR+E G
Sbjct 135 RTTEPGTRVVYSLMALLDNAWRAGALGAESGAVAAAPPAAVPPALAADLKVIREERGLGL 194
Query 182 DDRVVTKCFLLWAGVVGAISLEVFGQYGADMLTDPGVVFDAQTRLLVAV 230
D ++ + L+W + GAIS EVFGQYG + +F+ ++L +
Sbjct 195 TDGLLARGALVWTSLFGAISFEVFGQYGEGTFSARDELFEHHLQVLAGI 243
>gi|340795564|ref|YP_004761027.1| TetR DNA-binding transcription regulator [Corynebacterium variabile
DSM 44702]
gi|340535474|gb|AEK37954.1| TetR DNA-binding transcription regulator [Corynebacterium variabile
DSM 44702]
Length=273
Score = 172 bits (436), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 99/217 (46%), Positives = 130/217 (60%), Gaps = 9/217 (4%)
Query 12 DAREQIEAKIVELGRRQLLDHGAAGLSLRAIARNLGMVSSAVYRYVSSRDELLTLLLVDA 71
AR ++ I+ LGR QL GAA LS+R IAR LG+ SSAVYR+VSSR+ELLTLL+ D
Sbjct 46 QARAEMREGILRLGREQLETRGAAALSVREIARGLGVASSAVYRHVSSREELLTLLVADT 105
Query 72 YSDLADTVDRARDDTVADSWSD------DVIAIARAVRGWAVTNPARWALLYGSPVPGYH 125
Y+DLAD VD A D +ADS + + +A AVRGWAV NP RWAL+YG+PVPGY
Sbjct 106 YTDLADRVDAALAD-IADSSGNTGNTTPPLPTMAHAVRGWAVANPTRWALIYGTPVPGYA 164
Query 126 APPDRTAGVATRVVGAFFDAIAAGIATGDIRLTDDVAPQP-MSSDFEKIRQEFGFPGDDR 184
AP D T TRV+G F +A G +G + D +P P ++ + +E G R
Sbjct 165 APADTTTMPGTRVMGVFLGIVAGGAGSGTPQ-DDSPSPSPELTQVLAEGTEELGVVASPR 223
Query 185 VVTKCFLLWAGVVGAISLEVFGQYGADMLTDPGVVFD 221
L W+ ++G IS E+FGQ G ++ G + D
Sbjct 224 ASADAVLAWSSLIGLISAEIFGQLGPELAALGGELLD 260
>gi|229491157|ref|ZP_04384985.1| transcriptional regulator, TetR family [Rhodococcus erythropolis
SK121]
gi|229321895|gb|EEN87688.1| transcriptional regulator, TetR family [Rhodococcus erythropolis
SK121]
Length=231
Score = 170 bits (430), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 102/224 (46%), Positives = 135/224 (61%), Gaps = 5/224 (2%)
Query 10 RRDAREQIEAKIVELGRRQLLDHGAAGLSLRAIARNLGMVSSAVYRYVSSRDELLTLLLV 69
R AREQ I +GR L GAA LSLRA+AR+LG+VSSAVYRYV+SRDELLTLL+V
Sbjct 6 RERAREQTLQDITRIGREHLAAVGAAALSLRAVARDLGVVSSAVYRYVASRDELLTLLVV 65
Query 70 DAYSDLADTVDRARDDTVADSWSDDVIAIARAVRGWAVTNPARWALLYGSPVPGYHAPPD 129
D Y++L VD A + A+ + IA+ RAVR WA+ PAR+ LL+GSPVPGY AP +
Sbjct 66 DGYTELGAEVDAAVNAVAAEDFRGQFIALGRAVRSWAIREPARYGLLFGSPVPGYDAPGE 125
Query 130 RTAGVATRVVGAFFDAIAAGIATGDIRLTDDVA-PQPMSSDFEKIRQEFG--FPGDDRVV 186
+T G T VV I A G + + + +++D E +R E G P D V
Sbjct 126 QTTGPGTLVVTRLIGIIDAAHRAGSLTVREGPGLSDTLAADLEGVRNELGTDLPPDAAV- 184
Query 187 TKCFLLWAGVVGAISLEVFGQYGADMLTDPGVVFDAQTRLLVAV 230
+ L+W + G+++ EVFGQYG+D TD +F+ LL V
Sbjct 185 -RATLVWVSLFGSVNFEVFGQYGSDTFTDASEIFERHLALLADV 227
>gi|257068375|ref|YP_003154630.1| transcriptional regulator, tetR family [Brachybacterium faecium
DSM 4810]
gi|256559193|gb|ACU85040.1| transcriptional regulator, tetR family [Brachybacterium faecium
DSM 4810]
Length=251
Score = 168 bits (425), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 105/240 (44%), Positives = 138/240 (58%), Gaps = 15/240 (6%)
Query 6 RVGKRRDAREQIEAKIVELGRRQLLDHGAAGLSLRAIARNLGMVSSAVYRYVSSRDELLT 65
R G R ARE+ A+I+ELG QL +HGAA LS+R IAR LGMVSSA+YRYV+SRDELLT
Sbjct 12 RPGSRVAARERTMARIIELGNAQLREHGAAELSVREIARGLGMVSSAIYRYVTSRDELLT 71
Query 66 LLLVDAYSDLADTVDRARDDTVADSWSDD----VIAIARAVRGWAVTNPARWALLYGSPV 121
LL+VDA+ DLA TV+ A + + + +A+ A+ WA+ +P RW LLYG+PV
Sbjct 72 LLIVDAFEDLAGTVENAVEQAAGEERAGGPRARFLALGDAMSAWAIAHPERWTLLYGTPV 131
Query 122 PGYHAPPDRTAGVATRVVGAFFDAIAA---------GIATGDIRLTDDVAPQPMSSDFEK 172
GY AP +RT TRV+ A AIAA G TG D+ P +++ E
Sbjct 132 RGYAAPAERTNDAGTRVIRAVL-AIAADAHAQGGPPGAETGRGAAGADLPPG-VTALLED 189
Query 173 IRQEFGFPGDDRVVTKCFLLWAGVVGAISLEVFGQYGADMLTDPGVVFDAQTRLLVAVLA 232
EFG + W+ +VGAIS+ VFGQ G D + + AQ R L ++A
Sbjct 190 HVDEFGIATPAHAAFEALTAWSSLVGAISVHVFGQLGPDAVAVGEQILAAQVRRLADLIA 249
>gi|256826080|ref|YP_003150040.1| transcriptional regulator [Kytococcus sedentarius DSM 20547]
gi|256689473|gb|ACV07275.1| transcriptional regulator [Kytococcus sedentarius DSM 20547]
Length=223
Score = 153 bits (387), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 93/199 (47%), Positives = 115/199 (58%), Gaps = 3/199 (1%)
Query 11 RDAREQIEAKIVELGRRQLLDHGAAGLSLRAIARNLGMVSSAVYRYVSSRDELLTLLLVD 70
R +R ++EA I+ GRRQL GAA LSLR +AR +G+VSSAVYRYVSSRDELLT LLV
Sbjct 3 RRSRTEMEAAILCAGRRQLQQKGAAALSLREVAREVGVVSSAVYRYVSSRDELLTRLLVA 62
Query 71 AYSDLADTVDRARDDTVADSWSDDVIAIARAVRGWAVTNPARWALLYGSPVPGYHAPPDR 130
AY LAD VD A ADS + IARAVR WAV +P W L+YG+PVPGY AP +R
Sbjct 63 AYDGLADAVDAALGR--ADS-RQALAVIARAVRAWAVEHPEEWGLIYGTPVPGYAAPQER 119
Query 131 TAGVATRVVGAFFDAIAAGIATGDIRLTDDVAPQPMSSDFEKIRQEFGFPGDDRVVTKCF 190
T G TRV+ A+ + A P++ + + P V
Sbjct 120 TGGPGTRVLALVLQAVVDAGSGRPGAGRGAEAAGPLAGFAAEAAEVLDVPASSEQVAAAM 179
Query 191 LLWAGVVGAISLEVFGQYG 209
WAG+VG + EVFG +G
Sbjct 180 GWWAGLVGLVHAEVFGFWG 198
>gi|260907214|ref|ZP_05915536.1| transcriptional regulator, TetR family protein [Brevibacterium
linens BL2]
Length=217
Score = 146 bits (368), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 82/211 (39%), Positives = 123/211 (59%), Gaps = 19/211 (9%)
Query 10 RRDAREQIEAKIVELGRRQLLDHGAAGLSLRAIARNLGMVSSAVYRYVSSRDELLTLLLV 69
R+ AR + EA+I +G R L D G G+SLRAIAR LG+VSSA+YRYV +RDELLT+L+
Sbjct 7 RQRARLETEAQITRIGNRMLDDDGLEGVSLRAIARELGIVSSAIYRYVKNRDELLTILIR 66
Query 70 DAYSDLADTVDRA--RDDTVADSWSDDVIAIARAVRGWAVTNPARWALLYGSPVPGYHAP 127
DA++ +AD VD A RD++ V+ + + W+ +P RWAL+YG+P+P Y AP
Sbjct 67 DAFTAIADEVDEALTRDES--------VLTVGVTMLAWSRRHPNRWALIYGTPIPDYQAP 118
Query 128 PDRTAGVATRVVGAFFDAIAAGIATGDIRLTDDVAPQPMSSDFEKIRQEFGFPGDDRVVT 187
D T TR++ + + A ++ + ++ P + +E G DD+V+
Sbjct 119 RDETVVPGTRIMVTLTNLLEKSSA---VQTSSELPPSHALDPLREGLRELGLEPDDQVIV 175
Query 188 KCFLLWAGVVGAISLEVFGQYGADMLTDPGV 218
+ +WA +VG I+ FGQ+G PGV
Sbjct 176 RSVTVWAALVGLINALRFGQFG------PGV 200
>gi|296269149|ref|YP_003651781.1| TetR family transcriptional regulator [Thermobispora bispora
DSM 43833]
gi|296091936|gb|ADG87888.1| transcriptional regulator, TetR family [Thermobispora bispora
DSM 43833]
Length=278
Score = 145 bits (365), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 88/203 (44%), Positives = 124/203 (62%), Gaps = 8/203 (3%)
Query 10 RRDAREQIEAKIVELGRRQLLDHGAAGLSLRAIARNLGMVSSAVYRYVSSRDELLTLLLV 69
R R+++ +I+++ RR L HGAAGLSLRA+AR LGMVSSA+YRY SRD+LLT L++
Sbjct 8 RERVRQELIREIIDVARRHLATHGAAGLSLRAVARELGMVSSAIYRYFPSRDDLLTALII 67
Query 70 DAYSDLADTVDRARDDTVADSWSDDVIAIARAVRGWAVTNPARWALLYGSPVPGYHAPPD 129
D Y + + V+ A D ++ + + RAVR WA+ +P +ALLYGSPVPGY AP D
Sbjct 68 DGYDAIGEAVELAEAALPRDDFTGRWLRVCRAVREWALAHPHEYALLYGSPVPGYRAPGD 127
Query 130 --RTAGVATRVVGAFF-DAIAAGIATGDIRLTDDVAPQPMSSDFEKIRQEF-GFPGDDRV 185
A + RV G DA AAG + L + A +S+DF+++R G P D V
Sbjct 128 TIEPASRSLRVFGRIVADAHAAGRLSPPPTLPEPPA--TLSADFDRVRSFMPGVPDD--V 183
Query 186 VTKCFLLWAGVVGAISLEVFGQY 208
V + + W + G +S E+FGQ+
Sbjct 184 VARAGIAWTDLFGMVSFELFGQF 206
>gi|297158268|gb|ADI07980.1| TetR family transcriptional regulator [Streptomyces bingchenggensis
BCW-1]
Length=217
Score = 143 bits (361), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 87/230 (38%), Positives = 128/230 (56%), Gaps = 16/230 (6%)
Query 1 LCQTCRVGKRRDAREQIEAKIVELGRRQLLDHGAAGLSLRAIARNLGMVSSAVYRYVSSR 60
+ +T R R Q+ ++ + Q+ GA+ LSL AIA+ +GM A+YRY +SR
Sbjct 1 MAETGTTTPRERYRAQVRMEVKKRAWEQIATAGASALSLNAIAKQMGMSGPALYRYFASR 60
Query 61 DELLTLLLVDAYSDLADTVDRARDDTVADSWSDDVIAIARAVRGWAVTNPARWALLYGSP 120
DEL+T L+ DAY LADT+ A + + A DV A+A A+RGWA+ +P R+ L+YG+P
Sbjct 61 DELITELIRDAYRSLADTIRAASEKSGA-----DVAALAHAMRGWALEDPQRYFLIYGTP 115
Query 121 VPGYHAPPDRTAGVATRVVGAFFDAIAAGIATGDIRLTDDVAPQPMSSDFEKIRQEF-GF 179
VPGYHAP D TA +A+ ++ + +A A L D P + E RQ G
Sbjct 116 VPGYHAPDDTTA-IASEIMASLLEAWTA--------LPPDSPATPFDAHIEDHRQWADGH 166
Query 180 PGDDRVVTKCFLLWAGVVGAISLEVFGQYGADMLTDPGVVFDAQTRLLVA 229
P V+ + + W + G +SLE+ GQ+G M DP +F A+ L+A
Sbjct 167 PAPPAVLHQALICWTRLHGVLSLELAGQFGG-MGFDPAQLFAAELDALLA 215
>gi|269128342|ref|YP_003301712.1| TetR family transcriptional regulator [Thermomonospora curvata
DSM 43183]
gi|268313300|gb|ACY99674.1| transcriptional regulator, TetR family [Thermomonospora curvata
DSM 43183]
Length=246
Score = 143 bits (360), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 88/208 (43%), Positives = 118/208 (57%), Gaps = 9/208 (4%)
Query 8 GKRRDAREQIEAKIVELGRRQLLDHGAAGLSLRAIARNLGMVSSAVYRYVSSRDELLTLL 67
G R R ++ +IVEL RR L GAAGLSLRA+AR +GM SSA+YRY S+D+LLT L
Sbjct 6 GVRERVRAELTREIVELARRHLATEGAAGLSLRAVAREMGMASSAIYRYFPSKDDLLTTL 65
Query 68 LVDAYSDLADTVDRARDDTVADSWSDDVIAIARAVRGWAVTNPARWALLYGSPVPGYHAP 127
+++ Y+ L V+RA A RAVR WA+ +P +ALLYGSPVPGY AP
Sbjct 66 IIEGYTALGRAVERADAGCDPADHGGRWRAACRAVRDWALAHPHEYALLYGSPVPGYRAP 125
Query 128 PDRTAGVATRVVGAFF----DAIAAGI--ATGDIRLTDDVAPQPMSSDFEKIRQEFGFPG 181
D T A R F DA AG+ A + P ++ D E++R++ PG
Sbjct 126 QD-TVAPALRATLVFCRIVADAHRAGVLAAPPGAAAAEQGFPAAVAEDLERVRRQV-MPG 183
Query 182 -DDRVVTKCFLLWAGVVGAISLEVFGQY 208
D V+ + W+GV G +S E+FGQ+
Sbjct 184 LPDEVIMRAMTAWSGVYGWVSFELFGQF 211
>gi|163839499|ref|YP_001623904.1| TetR family transcriptional regulator [Renibacterium salmoninarum
ATCC 33209]
gi|162952975|gb|ABY22490.1| transcriptional regulator, TetR family [Renibacterium salmoninarum
ATCC 33209]
Length=252
Score = 140 bits (354), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 92/224 (42%), Positives = 123/224 (55%), Gaps = 3/224 (1%)
Query 8 GKRRDAREQIEAKIVELGRRQLLDHGAAGLSLRAIARNLGMVSSAVYRYVSSRDELLTLL 67
G R AREQI ++I+ L QL + GA GLSLRAIAR LGMVSSA+YRY SS D LLT L
Sbjct 15 GVRARAREQILSEILALAEAQLREKGAYGLSLRAIARELGMVSSAIYRYFSSADALLTAL 74
Query 68 LVDAYSDLADTVDRARDDTVADSWSDDVIAIARAVRGWAVTNPARWALLYGSPVPGYHAP 127
+V AY++LAD D ++ +A+ R WA+ NP R+AL+YGSPVPGY AP
Sbjct 75 IVRAYNELADAAQAQYDAAGSEPRLAQFLAVCHGSRDWAIANPHRYALIYGSPVPGYQAP 134
Query 128 PDRTAGVATRVVGAFFDAIAAGIATGDIRLTDDVAPQPMSSDFEKIRQEFGFPGDDRVVT 187
P+ T A R VG A A G+ PQ ++ + + FG + ++
Sbjct 135 PE-TIEPAGR-VGLLMIATATGVQGRGFHHPPSEWPQERAALTATLTEHFGSALEPDMIA 192
Query 188 KCFLLWAGVVGAISLEVFGQYGADMLTDPGVVFDAQTRLLVAVL 231
W+ + G IS E+FG + +++ V FDA R A L
Sbjct 193 VGVAAWSHLFGLISFELFGHF-VGSVSNNRVYFDAVMRNWAAQL 235
>gi|271963846|ref|YP_003338042.1| TetR family transcriptional regulator [Streptosporangium roseum
DSM 43021]
gi|270507021|gb|ACZ85299.1| putative transcriptional regulator, TetR family [Streptosporangium
roseum DSM 43021]
Length=236
Score = 140 bits (352), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 87/231 (38%), Positives = 127/231 (55%), Gaps = 7/231 (3%)
Query 6 RVGKRRDAREQIEAK----IVELGRRQLLDHGAAGLSLRAIARNLGMVSSAVYRYVSSRD 61
+ R ARE++ A+ I ++ RR L GA GLSLRA+AR +GMVSSA+YRY SRD
Sbjct 4 NMSSSRTARERVRAELTREITDIARRHLATEGAGGLSLRAVAREMGMVSSAIYRYFPSRD 63
Query 62 ELLTLLLVDAYSDLADTVDRARDDTVADSWSDDVIAIARAVRGWAVTNPARWALLYGSPV 121
+LLT L++D Y+ + + V+ A + + +A+ AVR WA+ +P +ALLYGSPV
Sbjct 64 DLLTALIIDGYNAVGEAVENADAACPPEDHTGRWLAVCHAVRDWALAHPHEYALLYGSPV 123
Query 122 PGYHAPPDR-TAGVATRVVGAFFDAIAAGIATGDIRLTDDVAPQPMSSDFEKIRQEFGFP 180
PGY AP D TA V ++ + A + P P+S D ++R
Sbjct 124 PGYQAPQDTVTAAVRDTIIYGRIVSDAYRAGALNPPAVCPPVPAPLSEDAARVRAIIPDV 183
Query 181 GDDRVVTKCFLLWAGVVGAISLEVFGQYGADMLTDPGVVFDAQTRLLVAVL 231
DD V+ + ++W G+ G ++ E+FGQ+ +L D G FD R A L
Sbjct 184 PDD-VIVRSLIVWTGLFGWLNFELFGQFNNTIL-DTGTAFDHSMRCQAAFL 232
>gi|312198043|ref|YP_004018104.1| TetR family transcriptional regulator [Frankia sp. EuI1c]
gi|311229379|gb|ADP82234.1| regulatory protein TetR [Frankia sp. EuI1c]
Length=247
Score = 138 bits (348), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 93/229 (41%), Positives = 120/229 (53%), Gaps = 14/229 (6%)
Query 10 RRDAREQIEAKIVELGRRQLLDHGAAGLSLRAIARNLGMVSSAVYRYVSSRDELLTLLLV 69
R AR ++ +I E RR L GAA LSLRA+AR LGM SSAVYRY SRDELLT+L++
Sbjct 8 RELARAELTRQIKETARRHLATSGAAALSLRAVARELGMTSSAVYRYFPSRDELLTVLII 67
Query 70 DAYSDLADTVDRARDDTVADSWSDDVIAIARAVRGWAVTNPARWALLYGSPVPGYHAPPD 129
+AY L ++A D ++ A+ AVR WA +P +ALLYGSPVPGY AP D
Sbjct 68 EAYDALGARAEQADDAVPPSAFLSRWHAVCGAVREWAAEHPHEYALLYGSPVPGYRAPRD 127
Query 130 RTAGVATRVVGAFFDAIAAGIATGDIRLTDDVAPQP---------MSSDFEKIRQEFGFP 180
T G A RVV + AG G + D P D ++
Sbjct 128 -TTGPAARVVTRLALIVGAGWRAGQVVRPRDEQTSPDWSLRRAGRAEDDLRRLAGTLDL- 185
Query 181 GD--DRVVTKCFLLWAGVVGAISLEVFGQYGADMLTDPGVVFDAQTRLL 227
GD V+ + W+ + G ISLE FGQ A+ + DP VF+ TR +
Sbjct 186 GDLPVEVLLRAVAAWSQLFGFISLESFGQM-ANAINDPDAVFEQTTRAM 233
>gi|227548759|ref|ZP_03978808.1| TetR family transcriptional regulator [Corynebacterium lipophiloflavum
DSM 44291]
gi|227079171|gb|EEI17134.1| TetR family transcriptional regulator [Corynebacterium lipophiloflavum
DSM 44291]
Length=221
Score = 137 bits (345), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 83/211 (40%), Positives = 117/211 (56%), Gaps = 10/211 (4%)
Query 10 RRDAREQIEAKIVELGRRQLLDHGAAGLSLRAIARNLGMVSSAVYRYVSSRDELLTLLLV 69
R+ AR+++ +I E+G QL G L+LRA+AR LG+VSSA+YRYV+ RD LTLL+
Sbjct 5 RQIARDEMMRRISEIGFAQLDAGGPHALNLRAVARELGVVSSAIYRYVADRDAFLTLLVT 64
Query 70 DAYSDLADTVDRARDDTVADSWSDDVIAIARAVRGWAVTNPARWALLYGSPVPGYHAPPD 129
DAY LAD+V+R + V+ IA A+R WA+ +P RW L+YG+PV GY AP D
Sbjct 65 DAYRQLADSVER-------NGQPASVVGIAEAMRAWAIAHPRRWGLIYGTPVVGYAAPSD 117
Query 130 RTAGVATRVVGAFFDAIAAGIATGDIRLTDDVAPQPMSSDFEKIRQEFGFPGDDRVVTKC 189
T TRV+ +A+ + D T + D E +R+E+ V
Sbjct 118 -TLSQGTRVMRMLLEALDNAHPSVDTPST--ALDEATREDIEALRREWAPQLSAGAVELA 174
Query 190 FLLWAGVVGAISLEVFGQYGADMLTDPGVVF 220
W+ ++G IS EVFG +G P V+F
Sbjct 175 VEAWSRIIGLISSEVFGHFGEGAFRQPAVLF 205
>gi|291299818|ref|YP_003511096.1| TetR family transcriptional regulator [Stackebrandtia nassauensis
DSM 44728]
gi|290569038|gb|ADD42003.1| transcriptional regulator, TetR family [Stackebrandtia nassauensis
DSM 44728]
Length=234
Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 87/225 (39%), Positives = 124/225 (56%), Gaps = 7/225 (3%)
Query 10 RRDAREQIEAKIVELGRRQLLDHGAAGLSLRAIARNLGMVSSAVYRYVSSRDELLTLLLV 69
R AR + A IV R QL D GAAGLSLRA+AR LGMVSSA++RY ++D+LLT L++
Sbjct 8 RERARAALTADIVTAARAQLADTGAAGLSLRAVARELGMVSSAIHRYFPTKDDLLTALII 67
Query 70 DAYSDLADTVDRARDDTVADSWSDDVIAIARAVRGWAVTNPARWALLYGSPVPGYHAPPD 129
D Y+ + V+ A + A+ RAVR WA+ +P +ALLYGSPVPGY AP D
Sbjct 68 DGYNAVGQAVEDADAACERTDYFGRWRAVCRAVRTWALEHPQEYALLYGSPVPGYEAPMD 127
Query 130 RTAGVATRVVGAFFDAIAAGIATGDIRLT--DDVAPQPMSSDFEKIRQEFGFPG-DDRVV 186
T A R F ++ G + T + P ++D +++R+ P D +
Sbjct 128 -TVPAAVRDTAVFGTIVSEADKAGALAPTGPELKPPASFAADAQQVREV--IPDVSDATI 184
Query 187 TKCFLLWAGVVGAISLEVFGQYGADMLTDPGVVFDAQTRLLVAVL 231
+ W G+ G ++ E+FGQ+ ++L D V FD Q L +L
Sbjct 185 ARAVSAWTGLYGWVNFELFGQFN-NVLEDRDVAFDLQIDCLAGIL 228
>gi|300790738|ref|YP_003771029.1| TetR family transcriptional regulator [Amycolatopsis mediterranei
U32]
gi|299800252|gb|ADJ50627.1| TetR family transcriptional regulator [Amycolatopsis mediterranei
U32]
gi|340532428|gb|AEK47633.1| TetR family transcriptional regulator [Amycolatopsis mediterranei
S699]
Length=223
Score = 135 bits (341), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 84/217 (39%), Positives = 120/217 (56%), Gaps = 13/217 (5%)
Query 10 RRDAREQIEAKIVELGRRQLLDHGAAGLSLRAIARNLGMVSSAVYRYVSSRDELLTLLLV 69
R AR ++ +I + RRQL + GA GLSLRA+AR LGMVSSA+YRY SRD LLT L+V
Sbjct 8 RERARAELTQEIKDEARRQLAEVGAHGLSLRAVARELGMVSSAIYRYFPSRDRLLTDLIV 67
Query 70 DAYSDLADTVDRARDDT--VADSWSDDVIAIARAVRGWAVTNPARWALLYGSPVPGYHAP 127
DAY+ + + ++A T + + W +AI + R WA +P +AL+YGSP+PGY AP
Sbjct 68 DAYNAIGEAAEKADPGTGDLRERW----LAIWQGTRDWARAHPHEYALIYGSPIPGYAAP 123
Query 128 PDRTAGVATRVVGAFFDAIAAGIATGDIRLTDDVAPQPMSSDFEKIRQEFGFPGDDRVVT 187
D T A RV A + + ++R D P + + E + + G V
Sbjct 124 QD-TVVPAARVALALVNV----LTHTELRDIDGEVPPELRAQAEALTKVLGIIAGPETVA 178
Query 188 KCFLLWAGVVGAISLEVFGQYGADMLTDPGVVFDAQT 224
+ + W + GAIS ++FGQY + DP F A +
Sbjct 179 RLLMAWTQLFGAISFDLFGQYVGSV--DPADAFFAHS 213
>gi|291442826|ref|ZP_06582216.1| TetR-family transcriptional regulator [Streptomyces roseosporus
NRRL 15998]
gi|291345773|gb|EFE72677.1| TetR-family transcriptional regulator [Streptomyces roseosporus
NRRL 15998]
Length=235
Score = 135 bits (339), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 87/210 (42%), Positives = 120/210 (58%), Gaps = 17/210 (8%)
Query 8 GKRRDAREQIEAKIVELGRRQLLDHGAAGLSLRAIARNLGMVSSAVYRYVSSRDELLTLL 67
G R AR ++ A I + R+QL + GA LSLRA+AR LGMVSSA+YRY SRD+LLT L
Sbjct 6 GARERARIEVTAAIKDEARKQLAEEGAPKLSLRAVARELGMVSSALYRYFPSRDDLLTAL 65
Query 68 LVDAYSDLADTVDRARDDTVADSWSDDV------IAIARAVRGWAVTNPARWALLYGSPV 121
+VDA+ D + A + VA+ + +V +A++ AVR WA+ +P +AL+YGSPV
Sbjct 66 IVDAF----DAIGAAAEQAVAERAAGEVPPAERWVAVSCAVREWALAHPHEYALIYGSPV 121
Query 122 PGYHAPPDRTAGVATRVVGAFFDAIAAGIATGDIRLTDDVAPQPMSSDFEKIRQEF--GF 179
PGY AP D T G A RV D + GD+ L + +D E++ +F G
Sbjct 122 PGYIAPMD-TVGPAARVGLVLIDIVRGAFRAGDLTLPPLA--DELRADAERMAADFAEGV 178
Query 180 PGDDRVVTKCFLLWAGVVGAISLEVFGQYG 209
P + V WA + G IS E+FGQ+
Sbjct 179 PPES--VAALVAAWAQLFGLISFELFGQFN 206
>gi|302549531|ref|ZP_07301873.1| TetR-family transcriptional regulator [Streptomyces viridochromogenes
DSM 40736]
gi|302467149|gb|EFL30242.1| TetR-family transcriptional regulator [Streptomyces viridochromogenes
DSM 40736]
Length=244
Score = 134 bits (338), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 85/201 (43%), Positives = 112/201 (56%), Gaps = 4/201 (1%)
Query 8 GKRRDAREQIEAKIVELGRRQLLDHGAAGLSLRAIARNLGMVSSAVYRYVSSRDELLTLL 67
G R AR ++ A I + RRQL GAA LSLRA+AR LGMVSSA+YRY SRD+LLT L
Sbjct 6 GARARARIEVTAAIKDEARRQLAAQGAARLSLRAVARELGMVSSALYRYFPSRDDLLTAL 65
Query 68 LVDAYSDLADTVDRARDDTVADSWSDDVIAIARAVRGWAVTNPARWALLYGSPVPGYHAP 127
++DAY L + + A + D + IA+ AVRGWA+ +P +AL+YGSPVPGY A
Sbjct 66 IIDAYDSLGERAEAAHESAATDPFR-RWIAVCEAVRGWALDHPHEYALIYGSPVPGYTA- 123
Query 128 PDRTAGVATRVVGAFFDAIAAGIATGDIRLTDDVAPQPMSSDFEKIRQEFGFPGDDRVVT 187
PD T A R VG IA G L P + + E++ + VV+
Sbjct 124 PDTTVPSAAR-VGLLLLGIARDAHHGS-GLAGPALPSELRPEAERMAADLAPDLPPEVVS 181
Query 188 KCFLLWAGVVGAISLEVFGQY 208
WA + G + E+FGQ+
Sbjct 182 ALVAAWAQLYGLVGFELFGQF 202
>gi|326381454|ref|ZP_08203148.1| tetr family transcriptional regulator [Gordonia neofelifaecis
NRRL B-59395]
gi|326199701|gb|EGD56881.1| tetr family transcriptional regulator [Gordonia neofelifaecis
NRRL B-59395]
Length=233
Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/229 (38%), Positives = 127/229 (56%), Gaps = 9/229 (3%)
Query 7 VGKRRDAREQIEAKIVELGRRQLLDHGAAGLSLRAIARNLGMVSSAVYRYVSSRDELLTL 66
G R R +E+++ +G R L +HGAAGLSLRA+AR++ + SA+YRYV RD LLTL
Sbjct 8 TGPRARNRAAVESRLRTVGHRHLAEHGAAGLSLRAVARDMEITPSALYRYVRDRDALLTL 67
Query 67 LLVDAYSDLADTVDRARDDTVADSWSDDV--IAIARAVRGWAVTNPARWALLYGSPVPGY 124
L+VDAY+DLAD++D A VA S A A A+R WA+ NP+ +ALLYGSPVPGY
Sbjct 68 LIVDAYTDLADSIDAA----VARHRSGRTRFTAFAGALRDWALANPSEYALLYGSPVPGY 123
Query 125 HAPPDRTAGVATRVVGAFFDAIAAGIATGDIRLTDDVAPQPMSSDFEKIRQEFGFP--GD 182
AP ++T R + A + + D+ TD + + + P D
Sbjct 124 RAPREQTNPAGERPLIALASILTDAGSAPDVAGTDPRVQSAAARALGLLSDDPAVPAGAD 183
Query 183 DRVVTKCFLLWAGVVGAISLEVFGQYGADMLTDPGVVFDAQTRLLVAVL 231
V+ + +W ++G+I+ E+F Q G + DP ++ L A+L
Sbjct 184 AAVLARGIAVWNLLLGSITSELFEQLGP-VTDDPATLYAGVVDLGAALL 231
>gi|336117915|ref|YP_004572683.1| putative TetR family transcriptional regulator [Microlunatus
phosphovorus NM-1]
gi|334685695|dbj|BAK35280.1| putative TetR family transcriptional regulator [Microlunatus
phosphovorus NM-1]
Length=229
Score = 134 bits (336), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/198 (43%), Positives = 109/198 (56%), Gaps = 2/198 (1%)
Query 10 RRDAREQIEAKIVELGRRQLLDHGAAGLSLRAIARNLGMVSSAVYRYVSSRDELLTLLLV 69
R AR ++ I RRQL + G A LS+RAIAR+LGM SSAVYRY SRDELLT LLV
Sbjct 10 RAIARRELTDAITTSARRQLAEIGPAALSVRAIARDLGMASSAVYRYFPSRDELLTELLV 69
Query 70 DAYSDLADTVDRARDDTVADSWSDDVIAIARAVRGWAVTNPARWALLYGSPVPGYHAPPD 129
Y +LAD ++ A D S A+ A+R WA+ P +ALL+GSPVPGY A P+
Sbjct 70 IIYGELADRLEAADHAVDRDDLSGRWHALGEALRAWALQTPHEYALLFGSPVPGY-AAPE 128
Query 130 RTAGVATRVVGAFFDAIAAGIATGDIRLTDDVAPQPMSSDFEKIRQEFGFPGDDRVVTKC 189
RT A RV G +A G + ++ P + + IR G D +
Sbjct 129 RTIEPAGRVTGVLIALMADAQTRGPLPARTEL-PAEAHAVYAGIRTVTGIDFSDEASVRA 187
Query 190 FLLWAGVVGAISLEVFGQ 207
W+G+ GA+SLE+FG
Sbjct 188 LTAWSGLFGALSLELFGH 205
>gi|297155420|gb|ADI05132.1| TetR family transcriptional regulator [Streptomyces bingchenggensis
BCW-1]
Length=231
Score = 133 bits (334), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/202 (42%), Positives = 110/202 (55%), Gaps = 2/202 (0%)
Query 8 GKRRDAREQIEAKIVELGRRQLLDHGAAGLSLRAIARNLGMVSSAVYRYVSSRDELLTLL 67
G R AR ++ A I E RRQL GAA LSLRA+AR LGMVSSA+YRY SRDELLT L
Sbjct 6 GARERARTEVTAAIKEEARRQLAREGAAKLSLRAVARELGMVSSALYRYFPSRDELLTAL 65
Query 68 LVDAYSDLADTVDRARDDTVADSWSDDVIAIARAVRGWAVTNPARWALLYGSPVPGYHAP 127
+VDAY L + A + A+ RAVR WA+ +P +AL+YGSPVPGY A
Sbjct 66 IVDAYDALGAGAEAALAKADGQEPVERWSAVCRAVREWALAHPHEYALIYGSPVPGYSA- 124
Query 128 PDRTAGVATRVVGAFFDAIAAGIATGDIRLTDDV-APQPMSSDFEKIRQEFGFPGDDRVV 186
P T A+RV A + A G + + + P+ + D + G D +
Sbjct 125 PQTTVVPASRVGLALLAIVGDAHAAGTLSVPGEAEVPEAVRGDARALAGTLGIELPDAAL 184
Query 187 TKCFLLWAGVVGAISLEVFGQY 208
+ WA + G +S E+FGQ+
Sbjct 185 ARFVAAWAQLFGLVSFELFGQF 206
>gi|84497484|ref|ZP_00996306.1| putative transcriptional regulator [Janibacter sp. HTCC2649]
gi|84382372|gb|EAP98254.1| putative transcriptional regulator [Janibacter sp. HTCC2649]
Length=250
Score = 133 bits (334), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/227 (36%), Positives = 125/227 (56%), Gaps = 7/227 (3%)
Query 1 LCQTCRVGKRRDAREQIEAKIVE---LGRRQLLDHGAAGLSLRAIARNLGMVSSAVYRYV 57
L ++C+ RE++ A+ +E + L A LSLRA+AR++G+VSSAVYRY
Sbjct 2 LAESCQNRAMTTTRERLRAQTLEEIKAAAKARLAVDGANLSLRAVARDVGLVSSAVYRYF 61
Query 58 SSRDELLTLLLVDAYSDLADTVDRARDDTVADSWSDDVIAIARAVRGWAVTNPARWALLY 117
SRD LLT L++D+Y+++ V+ A D +A+A +R WA++ P+ +AL+Y
Sbjct 62 PSRDALLTALIIDSYNEMGAAVEAAEAAQPRDDLHARFMAVAHGIRDWALSAPSEYALIY 121
Query 118 GSPVPGYHAPPDRTAGVATRVVGAFFDAIAAGIATGDIRLTDDVAPQPMSSDFEKIRQEF 177
GSPVPGY AP D T A RV+ + G+ G + D +P++ D + +
Sbjct 122 GSPVPGYEAPQD-TIAPAARVITVLAGLLTDGLRDGTLHDPGDAISKPLAKDLAEFTSQP 180
Query 178 GFPG-DDRVVTKCFLLWAGVVGAISLEVFGQYGADMLTDPGVVFDAQ 223
F G ++ + W+GV G +S E+FG YG L DP +F+ Q
Sbjct 181 PFVGVPPALMARGVAAWSGVHGLVSFELFGAYGP--LGDPRALFEHQ 225
>gi|302540804|ref|ZP_07293146.1| TetR-family transcriptional regulator [Streptomyces hygroscopicus
ATCC 53653]
gi|302458422|gb|EFL21515.1| TetR-family transcriptional regulator [Streptomyces himastatinicus
ATCC 53653]
Length=244
Score = 133 bits (334), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 92/217 (43%), Positives = 121/217 (56%), Gaps = 17/217 (7%)
Query 3 QTCRV----GKRRDAREQIEAKIVELGRRQLLDHGAAGLSLRAIARNLGMVSSAVYRYVS 58
QT R+ G R AR ++ A I E RRQL D GAA LSLRA+AR LGMVSSA+YRY
Sbjct 9 QTGRMTAIRGARERARAEVTAAIKEEARRQLADQGAAKLSLRAVARELGMVSSALYRYYP 68
Query 59 SRDELLTLLLVDAY------SDLADTVDRARDDTVADSWSDDVIAIARAVRGWAVTNPAR 112
SRDELLT L+VDAY ++ A R DD VA W+ A+ RA R WA+ +P
Sbjct 69 SRDELLTALIVDAYDAIGAAAEAALAATRGDDDPVA-RWT----AVCRAARAWALAHPHE 123
Query 113 WALLYGSPVPGYHAPPDRTAGVATRVVGAFFDAIAAGIATGDIRLTDDVA-PQPMSSDFE 171
+AL+YGSPVPGY A P T A+RV A + A G +R+ ++ P+ + +D
Sbjct 124 YALIYGSPVPGYSA-PQATVAPASRVALALIAVVRDAYAAGALRVPEEAELPEGVRADIT 182
Query 172 KIRQEFGFPGDDRVVTKCFLLWAGVVGAISLEVFGQY 208
+ G + WA + G +S E+FGQ+
Sbjct 183 ALADTLGTELPAAALAALAAAWAQLFGLLSFELFGQF 219
>gi|302530947|ref|ZP_07283289.1| TetR-family transcriptional regulator [Streptomyces sp. AA4]
gi|302439842|gb|EFL11658.1| TetR-family transcriptional regulator [Streptomyces sp. AA4]
Length=248
Score = 132 bits (333), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 85/208 (41%), Positives = 114/208 (55%), Gaps = 21/208 (10%)
Query 11 RDAREQIEAK----IVELGRRQLLDHGAAGLSLRAIARNLGMVSSAVYRYVSSRDELLTL 66
R ARE++ A+ I + RRQL + GA GLSLRA+AR LGMVSSA+YRY SRD LLT
Sbjct 28 RTARERVRAELTREIKDEARRQLAEVGAHGLSLRAVARELGMVSSALYRYFPSRDHLLTA 87
Query 67 LLVDAYSDLADTVDRARDDT--VADSWSDDVIAIARAVRGWAVTNPARWALLYGSPVPGY 124
L+VDAY+ + + ++A T + W A+ RA R WA NP +AL+YGSP+PGY
Sbjct 88 LIVDAYNAVGEAAEQADPHTGDPRERWR----AVWRATRDWARANPHEYALIYGSPIPGY 143
Query 125 HAPPDRTAGVATRVVGAFFDAIAAGIATGDIRLTDDVAPQPMSSDF----EKIRQEFGFP 180
AP D T G A RV A + D + PMS + E++ +
Sbjct 144 QAPQD-TVGPAGRVAFALVAVL------RDAHPHEPAVTAPMSDELRAQAEQLTKVLEID 196
Query 181 GDDRVVTKCFLLWAGVVGAISLEVFGQY 208
VV + W + GA++ E+FGQY
Sbjct 197 APAEVVMRAIAAWTQLFGALNFELFGQY 224
>gi|54024584|ref|YP_118826.1| putative transcriptional regulator [Nocardia farcinica IFM 10152]
gi|54016092|dbj|BAD57462.1| putative transcriptional regulator [Nocardia farcinica IFM 10152]
Length=231
Score = 132 bits (331), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 94/210 (45%), Positives = 125/210 (60%), Gaps = 7/210 (3%)
Query 10 RRDAREQIEAKIVELGRRQLLDHGAAGLSLRAIARNLGMVSSAVYRYVSSRDELLTLLLV 69
R+ AR + I +GR L HGAA LSLRA+AR+LG+VSSAVYRYV+SRDELLTLL+V
Sbjct 5 RQRARARTMEDIKRIGREHLALHGAAALSLRAVARDLGVVSSAVYRYVASRDELLTLLVV 64
Query 70 DAYSDLADTVDRARDDTVADSWSDDVIAIARAVRGWAVTNPARWALLYGSPVPGYHAPPD 129
D Y+ L DTVD A D ++ + A ARAVR WA+ PA + LL+G+PVPGY AP +
Sbjct 65 DGYNALGDTVDAAIAAAPEDP-AERLRAAARAVRAWALAEPAWYGLLFGTPVPGYDAPAE 123
Query 130 RTAGVATRVVGAFF----DAIAAGIATGDIRLTDDVAPQPMSSDFEKIRQEFGFPGDDRV 185
+T TRV+ A DA G+ R V+P ++ F ++ EFG D +
Sbjct 124 QTVDPGTRVIAALLRIAADAHERGLLAKPARPV-RVSPD-LARSFARVGAEFGVRLPDGL 181
Query 186 VTKCFLLWAGVVGAISLEVFGQYGADMLTD 215
V + +W + GA+ +VF YG D D
Sbjct 182 VPRLVSVWTALFGAVGFDVFDMYGRDTFAD 211
>gi|256391020|ref|YP_003112584.1| TetR family transcriptional regulator [Catenulispora acidiphila
DSM 44928]
gi|256357246|gb|ACU70743.1| putative transcriptional regulator, TetR family [Catenulispora
acidiphila DSM 44928]
Length=224
Score = 131 bits (329), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 89/219 (41%), Positives = 120/219 (55%), Gaps = 20/219 (9%)
Query 21 IVELGRRQLLDHGA---AGLSLRAIARNLGMVSSAVYRYVSSRDELLTLLLVDAYSDLAD 77
++E +R L H A + LSLRA+AR++GMVSSA+YRY SRDELLT L++DAY+DL+
Sbjct 1 MLEEIKRVALVHLARDGSALSLRAVARDMGMVSSAIYRYFPSRDELLTALIIDAYNDLSG 60
Query 78 TVDRA-----RDDTVADSWSDDVIAIARAVRGWAVTNPARWALLYGSPVPGYHAPPDRTA 132
V++A R D W A+ AVR WA+ PA +AL+YGSP+PGY AP D T
Sbjct 61 VVEQADGGVDRRDAYLARW----FAVCHAVRRWAIAKPAEYALIYGSPIPGYLAPDD-TV 115
Query 133 GVATRVVGAFFDAIAAGIATGDIRLTDDVAPQPMSSDF---EKIR---QEFGFPGDDRVV 186
+R V IA A G + + VA P + + E++R GF D R V
Sbjct 116 EPGSRTVVIMARCIAEAEAAGKLHTAEGVAALPATENSVYAEELRAVAAGIGFAEDSRAV 175
Query 187 TKCFLLWAGVVGAISLEVFGQYGADMLTDPGVVFDAQTR 225
V GA++ EVFG+ + T+ G FD Q R
Sbjct 176 EAAVSAITHVFGAVNFEVFGRLN-RVFTERGEWFDRQVR 213
>gi|326780996|ref|ZP_08240261.1| regulatory protein TetR [Streptomyces cf. griseus XylebKG-1]
gi|326661329|gb|EGE46175.1| regulatory protein TetR [Streptomyces griseus XylebKG-1]
Length=238
Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/203 (43%), Positives = 119/203 (59%), Gaps = 4/203 (1%)
Query 8 GKRRDAREQIEAKIVELGRRQLLDHGAAGLSLRAIARNLGMVSSAVYRYVSSRDELLTLL 67
G R AR ++ A I + R+QL GAA LSLRA+AR LGMVSSA+YRY SRD+LLT L
Sbjct 6 GARERARIEVTAAIKDEARKQLAAEGAAKLSLRAVARELGMVSSALYRYFPSRDDLLTAL 65
Query 68 LVDAYSDLADTVDRARDDTVADS-WSDDVIAIARAVRGWAVTNPARWALLYGSPVPGYHA 126
+VDA+ + +RA + + ++ IA+A AVR W + +P +AL+YGSPVPGY A
Sbjct 66 IVDAFDAIGAVAERAAKEREGKAPHAERWIAVACAVREWGLAHPHEYALIYGSPVPGYIA 125
Query 127 PPDRTAGVATRVVGAFFDAIAAGIATGDIRLTDDVAPQPMSSDFEKIRQEFGFPGDDRVV 186
P D T G A+RV F D + ++ + +AP+ + SD E++ EF V
Sbjct 126 PMD-TVGPASRVGLVFIDIVRTASRAEELAVP-PLAPE-LRSDAERMAAEFAEGVPPAAV 182
Query 187 TKCFLLWAGVVGAISLEVFGQYG 209
WA + G IS E+FGQ+
Sbjct 183 AALVAAWAQLFGLISFELFGQFN 205
Lambda K H
0.323 0.138 0.413
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 313223274342
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40