BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv1824 Length=121 Score E Sequences producing significant alignments: (Bits) Value gi|15608961|ref|NP_216340.1| hypothetical protein Rv1824 [Mycoba... 232 1e-59 gi|167968084|ref|ZP_02550361.1| hypothetical protein MtubH3_0862... 207 5e-52 gi|240171747|ref|ZP_04750406.1| integral membrane protein [Mycob... 204 4e-51 gi|41407635|ref|NP_960471.1| hypothetical protein MAP1537 [Mycob... 199 8e-50 gi|296164810|ref|ZP_06847369.1| small basic protein [Mycobacteri... 199 9e-50 gi|254823242|ref|ZP_05228243.1| integral membrane protein [Mycob... 198 2e-49 gi|118618432|ref|YP_906764.1| hypothetical protein MUL_3043 [Myc... 181 4e-44 gi|183982708|ref|YP_001850999.1| hypothetical protein MMAR_2701 ... 176 8e-43 gi|333990559|ref|YP_004523173.1| hypothetical protein JDM601_191... 169 1e-40 gi|118472607|ref|YP_887953.1| integral membrane protein [Mycobac... 164 5e-39 gi|145223991|ref|YP_001134669.1| hypothetical protein Mflv_3405 ... 162 1e-38 gi|108799813|ref|YP_640010.1| hypothetical protein Mmcs_2847 [My... 161 4e-38 gi|289757928|ref|ZP_06517306.1| conserved hypothetical protein [... 160 5e-38 gi|169629486|ref|YP_001703135.1| hypothetical protein MAB_2400 [... 158 3e-37 gi|333920806|ref|YP_004494387.1| integral membrane protein [Amyc... 154 3e-36 gi|258654138|ref|YP_003203294.1| hypothetical protein Namu_4013 ... 153 1e-35 gi|111017927|ref|YP_700899.1| hypothetical protein RHA1_ro00909 ... 151 3e-35 gi|330468122|ref|YP_004405865.1| hypothetical protein VAB18032_2... 151 4e-35 gi|226360058|ref|YP_002777836.1| hypothetical protein ROP_06440 ... 151 4e-35 gi|238059185|ref|ZP_04603894.1| hypothetical protein MCAG_00151 ... 149 2e-34 gi|334337078|ref|YP_004542230.1| protein of unknown function DUF... 147 4e-34 gi|152967043|ref|YP_001362827.1| hypothetical protein Krad_3099 ... 146 1e-33 gi|120404117|ref|YP_953946.1| hypothetical protein Mvan_3138 [My... 145 1e-33 gi|315505910|ref|YP_004084797.1| hypothetical protein ML5_5173 [... 145 2e-33 gi|291450196|ref|ZP_06589586.1| integral membrane protein [Strep... 145 2e-33 gi|296129734|ref|YP_003636984.1| hypothetical protein Cfla_1888 ... 143 8e-33 gi|269795129|ref|YP_003314584.1| hypothetical protein Sked_18240... 143 1e-32 gi|290961952|ref|YP_003493134.1| protein [Streptomyces scabiei 8... 143 1e-32 gi|336118029|ref|YP_004572797.1| hypothetical protein MLP_23800 ... 142 1e-32 gi|229820593|ref|YP_002882119.1| hypothetical protein Bcav_2104 ... 141 4e-32 gi|117928436|ref|YP_872987.1| hypothetical protein Acel_1229 [Ac... 141 4e-32 gi|309810361|ref|ZP_07704196.1| conserved hypothetical protein [... 140 5e-32 gi|145594913|ref|YP_001159210.1| hypothetical protein Strop_2385... 140 5e-32 gi|311894955|dbj|BAJ27363.1| hypothetical protein KSE_15360 [Kit... 140 7e-32 gi|254386007|ref|ZP_05001323.1| integral membrane protein [Strep... 140 8e-32 gi|302533234|ref|ZP_07285576.1| integral membrane protein [Strep... 139 1e-31 gi|326331333|ref|ZP_08197624.1| small basic protein [Nocardioida... 139 1e-31 gi|226306714|ref|YP_002766674.1| hypothetical protein RER_32270 ... 139 2e-31 gi|256832536|ref|YP_003161263.1| hypothetical protein Jden_1304 ... 139 2e-31 gi|333028454|ref|ZP_08456518.1| hypothetical protein STTU_5958 [... 138 2e-31 gi|159038104|ref|YP_001537357.1| hypothetical protein Sare_2523 ... 138 2e-31 gi|325674352|ref|ZP_08154041.1| small basic protein [Rhodococcus... 138 3e-31 gi|312139837|ref|YP_004007173.1| integral membrane protein [Rhod... 137 4e-31 gi|256825328|ref|YP_003149288.1| hypothetical protein Ksed_15000... 135 1e-30 gi|311742447|ref|ZP_07716256.1| small basic protein [Aeromicrobi... 135 2e-30 gi|317124949|ref|YP_004099061.1| hypothetical protein Intca_1822... 134 5e-30 gi|332670441|ref|YP_004453449.1| hypothetical protein Celf_1932 ... 133 8e-30 gi|256392311|ref|YP_003113875.1| hypothetical protein Caci_3125 ... 133 1e-29 gi|295840150|ref|ZP_06827083.1| conserved hypothetical protein [... 132 2e-29 gi|84496379|ref|ZP_00995233.1| putative membrane protein [Janiba... 132 2e-29 >gi|15608961|ref|NP_216340.1| hypothetical protein Rv1824 [Mycobacterium tuberculosis H37Rv] gi|15841294|ref|NP_336331.1| small basic protein [Mycobacterium tuberculosis CDC1551] gi|31793014|ref|NP_855507.1| hypothetical protein Mb1855 [Mycobacterium bovis AF2122/97] 48 more sequence titles Length=121 Score = 232 bits (592), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 121/121 (100%), Positives = 121/121 (100%), Gaps = 0/121 (0%) Query 1 MGSDTAWSPARMIGIAALAVGIVLGLVFHPGVPEVIQPYLPIAVVAALDAVFGGLRAYLE 60 MGSDTAWSPARMIGIAALAVGIVLGLVFHPGVPEVIQPYLPIAVVAALDAVFGGLRAYLE Sbjct 1 MGSDTAWSPARMIGIAALAVGIVLGLVFHPGVPEVIQPYLPIAVVAALDAVFGGLRAYLE 60 Query 61 RIFDPKVFVVSFVFNVLVAALIVYVGDQLGVGTQLSTAIIVVLGIRIFGNTAALRRRLFG 120 RIFDPKVFVVSFVFNVLVAALIVYVGDQLGVGTQLSTAIIVVLGIRIFGNTAALRRRLFG Sbjct 61 RIFDPKVFVVSFVFNVLVAALIVYVGDQLGVGTQLSTAIIVVLGIRIFGNTAALRRRLFG 120 Query 121 A 121 A Sbjct 121 A 121 >gi|167968084|ref|ZP_02550361.1| hypothetical protein MtubH3_08625 [Mycobacterium tuberculosis H37Ra] gi|254550834|ref|ZP_05141281.1| hypothetical protein Mtube_10306 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|294996734|ref|ZP_06802425.1| hypothetical protein Mtub2_20068 [Mycobacterium tuberculosis 210] 29 more sequence titles Length=110 Score = 207 bits (526), Expect = 5e-52, Method: Compositional matrix adjust. Identities = 110/110 (100%), Positives = 110/110 (100%), Gaps = 0/110 (0%) Query 12 MIGIAALAVGIVLGLVFHPGVPEVIQPYLPIAVVAALDAVFGGLRAYLERIFDPKVFVVS 71 MIGIAALAVGIVLGLVFHPGVPEVIQPYLPIAVVAALDAVFGGLRAYLERIFDPKVFVVS Sbjct 1 MIGIAALAVGIVLGLVFHPGVPEVIQPYLPIAVVAALDAVFGGLRAYLERIFDPKVFVVS 60 Query 72 FVFNVLVAALIVYVGDQLGVGTQLSTAIIVVLGIRIFGNTAALRRRLFGA 121 FVFNVLVAALIVYVGDQLGVGTQLSTAIIVVLGIRIFGNTAALRRRLFGA Sbjct 61 FVFNVLVAALIVYVGDQLGVGTQLSTAIIVVLGIRIFGNTAALRRRLFGA 110 >gi|240171747|ref|ZP_04750406.1| integral membrane protein [Mycobacterium kansasii ATCC 12478] Length=110 Score = 204 bits (519), Expect = 4e-51, Method: Compositional matrix adjust. Identities = 108/110 (99%), Positives = 109/110 (99%), Gaps = 0/110 (0%) Query 12 MIGIAALAVGIVLGLVFHPGVPEVIQPYLPIAVVAALDAVFGGLRAYLERIFDPKVFVVS 71 MIGIAALA+GIVLGLVFHP VPEVIQPYLPIAVVAALDAVFGGLRAYLERIFDPKVFVVS Sbjct 1 MIGIAALALGIVLGLVFHPSVPEVIQPYLPIAVVAALDAVFGGLRAYLERIFDPKVFVVS 60 Query 72 FVFNVLVAALIVYVGDQLGVGTQLSTAIIVVLGIRIFGNTAALRRRLFGA 121 FVFNVLVAALIVYVGDQLGVGTQLSTAIIVVLGIRIFGNTAALRRRLFGA Sbjct 61 FVFNVLVAALIVYVGDQLGVGTQLSTAIIVVLGIRIFGNTAALRRRLFGA 110 >gi|41407635|ref|NP_960471.1| hypothetical protein MAP1537 [Mycobacterium avium subsp. paratuberculosis K-10] gi|118464105|ref|YP_882077.1| integral membrane protein [Mycobacterium avium 104] gi|254775367|ref|ZP_05216883.1| integral membrane protein [Mycobacterium avium subsp. avium ATCC 25291] gi|41395988|gb|AAS03854.1| hypothetical protein MAP_1537 [Mycobacterium avium subsp. paratuberculosis K-10] gi|118165392|gb|ABK66289.1| integral membrane protein [Mycobacterium avium 104] gi|336457587|gb|EGO36592.1| hypothetical protein (small basic protein) [Mycobacterium avium subsp. paratuberculosis S397] Length=110 Score = 199 bits (507), Expect = 8e-50, Method: Compositional matrix adjust. Identities = 104/110 (95%), Positives = 107/110 (98%), Gaps = 0/110 (0%) Query 12 MIGIAALAVGIVLGLVFHPGVPEVIQPYLPIAVVAALDAVFGGLRAYLERIFDPKVFVVS 71 MIGIAALA+GIVLGLVFHP VPEV+QPYLPIAVVAALDAVFGGLRAYLERIFDPKVFV+S Sbjct 1 MIGIAALAIGIVLGLVFHPSVPEVVQPYLPIAVVAALDAVFGGLRAYLERIFDPKVFVIS 60 Query 72 FVFNVLVAALIVYVGDQLGVGTQLSTAIIVVLGIRIFGNTAALRRRLFGA 121 FVFNV VAALIVYVGDQLGVGTQLSTAIIVVLGIRIFGN AALRRRLFGA Sbjct 61 FVFNVFVAALIVYVGDQLGVGTQLSTAIIVVLGIRIFGNAAALRRRLFGA 110 >gi|296164810|ref|ZP_06847369.1| small basic protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|342861272|ref|ZP_08717920.1| integral membrane protein [Mycobacterium colombiense CECT 3035] gi|295899824|gb|EFG79271.1| small basic protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|342131172|gb|EGT84453.1| integral membrane protein [Mycobacterium colombiense CECT 3035] Length=110 Score = 199 bits (507), Expect = 9e-50, Method: Compositional matrix adjust. Identities = 104/110 (95%), Positives = 107/110 (98%), Gaps = 0/110 (0%) Query 12 MIGIAALAVGIVLGLVFHPGVPEVIQPYLPIAVVAALDAVFGGLRAYLERIFDPKVFVVS 71 MIGIAALA+GIVLGLVFHP VPEV+QPYLPIAVVAALDAVFGGLRAYLERIFDPKVFV+S Sbjct 1 MIGIAALAIGIVLGLVFHPAVPEVVQPYLPIAVVAALDAVFGGLRAYLERIFDPKVFVIS 60 Query 72 FVFNVLVAALIVYVGDQLGVGTQLSTAIIVVLGIRIFGNTAALRRRLFGA 121 FVFNV VAALIVYVGDQLGVGTQLSTAIIVVLGIRIFGN AALRRRLFGA Sbjct 61 FVFNVFVAALIVYVGDQLGVGTQLSTAIIVVLGIRIFGNAAALRRRLFGA 110 >gi|254823242|ref|ZP_05228243.1| integral membrane protein [Mycobacterium intracellulare ATCC 13950] Length=110 Score = 198 bits (504), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 103/110 (94%), Positives = 106/110 (97%), Gaps = 0/110 (0%) Query 12 MIGIAALAVGIVLGLVFHPGVPEVIQPYLPIAVVAALDAVFGGLRAYLERIFDPKVFVVS 71 MIGIAALA+GI LGLVFHP VPEV+QPYLPIAVVAALDAVFGGLRAYLERIFDPKVFV+S Sbjct 1 MIGIAALAIGIALGLVFHPSVPEVVQPYLPIAVVAALDAVFGGLRAYLERIFDPKVFVIS 60 Query 72 FVFNVLVAALIVYVGDQLGVGTQLSTAIIVVLGIRIFGNTAALRRRLFGA 121 FVFNV VAALIVYVGDQLGVGTQLSTAIIVVLGIRIFGN AALRRRLFGA Sbjct 61 FVFNVFVAALIVYVGDQLGVGTQLSTAIIVVLGIRIFGNAAALRRRLFGA 110 >gi|118618432|ref|YP_906764.1| hypothetical protein MUL_3043 [Mycobacterium ulcerans Agy99] gi|118570542|gb|ABL05293.1| conserved hypothetical membrane protein [Mycobacterium ulcerans Agy99] Length=122 Score = 181 bits (458), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 109/120 (91%), Positives = 110/120 (92%), Gaps = 0/120 (0%) Query 2 GSDTAWSPARMIGIAALAVGIVLGLVFHPGVPEVIQPYLPIAVVAALDAVFGGLRAYLER 61 G + A MIGIAALAVGIVLGLVFHP VPE IQPYLPIAVVAALDAVFGGLRAYLER Sbjct 3 GREADGKSASMIGIAALAVGIVLGLVFHPSVPEAIQPYLPIAVVAALDAVFGGLRAYLER 62 Query 62 IFDPKVFVVSFVFNVLVAALIVYVGDQLGVGTQLSTAIIVVLGIRIFGNTAALRRRLFGA 121 IFDPKVFVVSFVFNVLVAALIVYVGDQLGVGTQLSTAIIVVLGIRIFGN AALRRRLFGA Sbjct 63 IFDPKVFVVSFVFNVLVAALIVYVGDQLGVGTQLSTAIIVVLGIRIFGNAAALRRRLFGA 122 >gi|183982708|ref|YP_001850999.1| hypothetical protein MMAR_2701 [Mycobacterium marinum M] gi|183176034|gb|ACC41144.1| conserved hypothetical membrane protein [Mycobacterium marinum M] Length=110 Score = 176 bits (447), Expect = 8e-43, Method: Compositional matrix adjust. Identities = 107/110 (98%), Positives = 107/110 (98%), Gaps = 0/110 (0%) Query 12 MIGIAALAVGIVLGLVFHPGVPEVIQPYLPIAVVAALDAVFGGLRAYLERIFDPKVFVVS 71 MIGIAALAVGIVLGLVFHP VPE IQPYLPIAVVAALDAVFGGLRAYLERIFDPKVFVVS Sbjct 1 MIGIAALAVGIVLGLVFHPSVPEAIQPYLPIAVVAALDAVFGGLRAYLERIFDPKVFVVS 60 Query 72 FVFNVLVAALIVYVGDQLGVGTQLSTAIIVVLGIRIFGNTAALRRRLFGA 121 FVFNVLVAALIVYVGDQLGVGTQLSTAIIVVLGIRIFGN AALRRRLFGA Sbjct 61 FVFNVLVAALIVYVGDQLGVGTQLSTAIIVVLGIRIFGNAAALRRRLFGA 110 >gi|333990559|ref|YP_004523173.1| hypothetical protein JDM601_1919 [Mycobacterium sp. JDM601] gi|333486527|gb|AEF35919.1| conserved hypothetical protein [Mycobacterium sp. JDM601] Length=110 Score = 169 bits (429), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 103/110 (94%), Positives = 105/110 (96%), Gaps = 0/110 (0%) Query 12 MIGIAALAVGIVLGLVFHPGVPEVIQPYLPIAVVAALDAVFGGLRAYLERIFDPKVFVVS 71 MIGIAAL GIVLGLVFHP VPEV+QPYLPIAVVAALDAVFGGLRAYLERIFD KVFVVS Sbjct 1 MIGIAALIAGIVLGLVFHPSVPEVVQPYLPIAVVAALDAVFGGLRAYLERIFDAKVFVVS 60 Query 72 FVFNVLVAALIVYVGDQLGVGTQLSTAIIVVLGIRIFGNTAALRRRLFGA 121 FVFNVLVAALIVY+GDQLGVGTQLSTAIIVVLGIRIFGN AALRRRLFGA Sbjct 61 FVFNVLVAALIVYLGDQLGVGTQLSTAIIVVLGIRIFGNAAALRRRLFGA 110 >gi|118472607|ref|YP_887953.1| integral membrane protein [Mycobacterium smegmatis str. MC2 155] gi|118173894|gb|ABK74790.1| integral membrane protein [Mycobacterium smegmatis str. MC2 155] Length=110 Score = 164 bits (414), Expect = 5e-39, Method: Compositional matrix adjust. Identities = 100/110 (91%), Positives = 104/110 (95%), Gaps = 0/110 (0%) Query 12 MIGIAALAVGIVLGLVFHPGVPEVIQPYLPIAVVAALDAVFGGLRAYLERIFDPKVFVVS 71 MIGI AL VGIVLGLVF P VPEV++PYLPIAVVAALDAVFGGLRAYLE+IFD KVFVVS Sbjct 1 MIGIVALVVGIVLGLVFRPDVPEVVEPYLPIAVVAALDAVFGGLRAYLEKIFDSKVFVVS 60 Query 72 FVFNVLVAALIVYVGDQLGVGTQLSTAIIVVLGIRIFGNTAALRRRLFGA 121 FVFNVLVAALIVY+GDQLGVGTQLSTAIIVVLGIRIFGN AALRRRLFGA Sbjct 61 FVFNVLVAALIVYLGDQLGVGTQLSTAIIVVLGIRIFGNAAALRRRLFGA 110 >gi|145223991|ref|YP_001134669.1| hypothetical protein Mflv_3405 [Mycobacterium gilvum PYR-GCK] gi|315444323|ref|YP_004077202.1| hypothetical protein Mspyr1_27370 [Mycobacterium sp. Spyr1] gi|145216477|gb|ABP45881.1| protein of unknown function DUF1290 [Mycobacterium gilvum PYR-GCK] gi|315262626|gb|ADT99367.1| uncharacterized conserved protein (small basic protein) [Mycobacterium sp. Spyr1] Length=110 Score = 162 bits (411), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 100/110 (91%), Positives = 103/110 (94%), Gaps = 0/110 (0%) Query 12 MIGIAALAVGIVLGLVFHPGVPEVIQPYLPIAVVAALDAVFGGLRAYLERIFDPKVFVVS 71 MIGI ALAVGIV+G+VF P VPE +QPYLPIAVVAALDAVFGGLRAYLE IFD KVFVVS Sbjct 1 MIGILALAVGIVVGVVFQPSVPEFVQPYLPIAVVAALDAVFGGLRAYLENIFDSKVFVVS 60 Query 72 FVFNVLVAALIVYVGDQLGVGTQLSTAIIVVLGIRIFGNTAALRRRLFGA 121 FVFNVLVAALIVYVGDQLGVGTQLSTAIIVVLGIRIFGN AALRRRLFGA Sbjct 61 FVFNVLVAALIVYVGDQLGVGTQLSTAIIVVLGIRIFGNAAALRRRLFGA 110 >gi|108799813|ref|YP_640010.1| hypothetical protein Mmcs_2847 [Mycobacterium sp. MCS] gi|119868923|ref|YP_938875.1| hypothetical protein Mkms_2891 [Mycobacterium sp. KMS] gi|126435457|ref|YP_001071148.1| hypothetical protein Mjls_2878 [Mycobacterium sp. JLS] gi|108770232|gb|ABG08954.1| protein of unknown function DUF1290 [Mycobacterium sp. MCS] gi|119695012|gb|ABL92085.1| protein of unknown function DUF1290 [Mycobacterium sp. KMS] gi|126235257|gb|ABN98657.1| protein of unknown function DUF1290 [Mycobacterium sp. JLS] Length=110 Score = 161 bits (407), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 99/110 (90%), Positives = 103/110 (94%), Gaps = 0/110 (0%) Query 12 MIGIAALAVGIVLGLVFHPGVPEVIQPYLPIAVVAALDAVFGGLRAYLERIFDPKVFVVS 71 MIGIAAL GIVLGLVF P VP+ ++PYLPIAVVAALDAVFGGLRAYLE+IFD KVFVVS Sbjct 1 MIGIAALLAGIVLGLVFRPSVPDFVEPYLPIAVVAALDAVFGGLRAYLEQIFDSKVFVVS 60 Query 72 FVFNVLVAALIVYVGDQLGVGTQLSTAIIVVLGIRIFGNTAALRRRLFGA 121 FVFNVLVAALIVYVGDQLGVGTQLSTAIIVVLGIRIFGN AALRRRLFGA Sbjct 61 FVFNVLVAALIVYVGDQLGVGTQLSTAIIVVLGIRIFGNAAALRRRLFGA 110 >gi|289757928|ref|ZP_06517306.1| conserved hypothetical protein [Mycobacterium tuberculosis T85] gi|289713492|gb|EFD77504.1| conserved hypothetical protein [Mycobacterium tuberculosis T85] Length=103 Score = 160 bits (406), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 98/103 (96%), Positives = 99/103 (97%), Gaps = 0/103 (0%) Query 1 MGSDTAWSPARMIGIAALAVGIVLGLVFHPGVPEVIQPYLPIAVVAALDAVFGGLRAYLE 60 MGSDTAWSPARMIGIAALAVGIVLGLVFHPGVPEVIQPYLPIAVVAALDAVFGGLRAYLE Sbjct 1 MGSDTAWSPARMIGIAALAVGIVLGLVFHPGVPEVIQPYLPIAVVAALDAVFGGLRAYLE 60 Query 61 RIFDPKVFVVSFVFNVLVAALIVYVGDQLGVGTQLSTAIIVVL 103 RIFDPKVFVVSFVFNVLVAALIVYVGDQLGVGT L AII +L Sbjct 61 RIFDPKVFVVSFVFNVLVAALIVYVGDQLGVGTYLFIAIIYLL 103 >gi|169629486|ref|YP_001703135.1| hypothetical protein MAB_2400 [Mycobacterium abscessus ATCC 19977] gi|169241453|emb|CAM62481.1| Conserved hypothetical protein [Mycobacterium abscessus] Length=110 Score = 158 bits (399), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 95/110 (87%), Positives = 103/110 (94%), Gaps = 0/110 (0%) Query 12 MIGIAALAVGIVLGLVFHPGVPEVIQPYLPIAVVAALDAVFGGLRAYLERIFDPKVFVVS 71 MIGI ALA+G+VLGLVFHP VP+ + PYLPIAVVAALDA+FGG RAYL++IFD KVFVVS Sbjct 1 MIGIVALAIGVVLGLVFHPNVPDAVAPYLPIAVVAALDALFGGARAYLDQIFDSKVFVVS 60 Query 72 FVFNVLVAALIVYVGDQLGVGTQLSTAIIVVLGIRIFGNTAALRRRLFGA 121 FVFNVLVAALIV+VGDQLGVGTQLSTAIIVVLGIRIFGN AALRRRLFGA Sbjct 61 FVFNVLVAALIVFVGDQLGVGTQLSTAIIVVLGIRIFGNAAALRRRLFGA 110 >gi|333920806|ref|YP_004494387.1| integral membrane protein [Amycolicicoccus subflavus DQS3-9A1] gi|333483027|gb|AEF41587.1| Integral membrane protein [Amycolicicoccus subflavus DQS3-9A1] Length=110 Score = 154 bits (390), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 80/110 (73%), Positives = 94/110 (86%), Gaps = 0/110 (0%) Query 12 MIGIAALAVGIVLGLVFHPGVPEVIQPYLPIAVVAALDAVFGGLRAYLERIFDPKVFVVS 71 MIGI AL G+VLG+ P +P +QPYLPIAVVAALDA+FGGLRAY E IFD KVFVVS Sbjct 1 MIGIVALLAGVVLGVYLSPDIPVYLQPYLPIAVVAALDALFGGLRAYFEGIFDSKVFVVS 60 Query 72 FVFNVLVAALIVYVGDQLGVGTQLSTAIIVVLGIRIFGNTAALRRRLFGA 121 F+FNV VA+L+V++GD LGVGTQLSTA++VVLGIRIFGN AA+RR +FGA Sbjct 61 FIFNVTVASLLVFLGDLLGVGTQLSTAVLVVLGIRIFGNAAAIRRGVFGA 110 >gi|258654138|ref|YP_003203294.1| hypothetical protein Namu_4013 [Nakamurella multipartita DSM 44233] gi|258557363|gb|ACV80305.1| protein of unknown function DUF1290 [Nakamurella multipartita DSM 44233] Length=110 Score = 153 bits (386), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 80/110 (73%), Positives = 92/110 (84%), Gaps = 0/110 (0%) Query 12 MIGIAALAVGIVLGLVFHPGVPEVIQPYLPIAVVAALDAVFGGLRAYLERIFDPKVFVVS 71 M + AL VG+V GL+ HP VPE + PYLPIAV+AALDAVFGGLRA L+ IFD KVFVVS Sbjct 1 MYAVIALIVGVVAGLLVHPTVPEWLAPYLPIAVIAALDAVFGGLRAKLDNIFDAKVFVVS 60 Query 72 FVFNVLVAALIVYVGDQLGVGTQLSTAIIVVLGIRIFGNTAALRRRLFGA 121 FV NVLVAA IV++GDQLGVG QLSTA++VVLGIRIFGN AA+RR +F A Sbjct 61 FVANVLVAAFIVFLGDQLGVGAQLSTAVVVVLGIRIFGNAAAIRRHIFKA 110 >gi|111017927|ref|YP_700899.1| hypothetical protein RHA1_ro00909 [Rhodococcus jostii RHA1] gi|110817457|gb|ABG92741.1| conserved hypothetical protein [Rhodococcus jostii RHA1] Length=132 Score = 151 bits (382), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 92/108 (86%), Positives = 100/108 (93%), Gaps = 0/108 (0%) Query 14 GIAALAVGIVLGLVFHPGVPEVIQPYLPIAVVAALDAVFGGLRAYLERIFDPKVFVVSFV 73 G+ AL VGIVLG+VF P VP+ +QPYLPIAVVAALDAVFGGLRAYL+ IFD KVFVVSFV Sbjct 25 GVLALIVGIVLGVVFSPQVPDAVQPYLPIAVVAALDAVFGGLRAYLDEIFDSKVFVVSFV 84 Query 74 FNVLVAALIVYVGDQLGVGTQLSTAIIVVLGIRIFGNTAALRRRLFGA 121 FNVLVAALIV++GDQLGVGTQLSTAI+VVLGIRIFGN AALRRRLFGA Sbjct 85 FNVLVAALIVWLGDQLGVGTQLSTAIVVVLGIRIFGNAAALRRRLFGA 132 >gi|330468122|ref|YP_004405865.1| hypothetical protein VAB18032_20825 [Verrucosispora maris AB-18-032] gi|328811093|gb|AEB45265.1| hypothetical protein VAB18032_20825 [Verrucosispora maris AB-18-032] Length=110 Score = 151 bits (381), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 80/110 (73%), Positives = 91/110 (83%), Gaps = 0/110 (0%) Query 12 MIGIAALAVGIVLGLVFHPGVPEVIQPYLPIAVVAALDAVFGGLRAYLERIFDPKVFVVS 71 MI + AL G+VLGL P VP +QPYLPIAVVAALDAVFGG+RA L+RIFD K FVVS Sbjct 1 MIAVLALLAGVVLGLWLDPTVPAALQPYLPIAVVAALDAVFGGVRAKLDRIFDDKQFVVS 60 Query 72 FVFNVLVAALIVYVGDQLGVGTQLSTAIIVVLGIRIFGNTAALRRRLFGA 121 F+ NVLVAALIVY+GDQLGVG QLST ++VVLG+RIFGN AA+RR LF A Sbjct 61 FISNVLVAALIVYLGDQLGVGGQLSTGVVVVLGVRIFGNVAAIRRHLFRA 110 >gi|226360058|ref|YP_002777836.1| hypothetical protein ROP_06440 [Rhodococcus opacus B4] gi|226238543|dbj|BAH48891.1| hypothetical membrane protein [Rhodococcus opacus B4] Length=120 Score = 151 bits (381), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 92/108 (86%), Positives = 100/108 (93%), Gaps = 0/108 (0%) Query 14 GIAALAVGIVLGLVFHPGVPEVIQPYLPIAVVAALDAVFGGLRAYLERIFDPKVFVVSFV 73 G+ AL VGIVLG+VF P VP+ +QPYLPIAVVAALDAVFGGLRAYL+ IFD KVFVVSFV Sbjct 13 GVLALIVGIVLGVVFSPQVPDAVQPYLPIAVVAALDAVFGGLRAYLDEIFDSKVFVVSFV 72 Query 74 FNVLVAALIVYVGDQLGVGTQLSTAIIVVLGIRIFGNTAALRRRLFGA 121 FNVLVAALIV++GDQLGVGTQLSTAI+VVLGIRIFGN AALRRRLFGA Sbjct 73 FNVLVAALIVWLGDQLGVGTQLSTAIVVVLGIRIFGNAAALRRRLFGA 120 >gi|238059185|ref|ZP_04603894.1| hypothetical protein MCAG_00151 [Micromonospora sp. ATCC 39149] gi|302867689|ref|YP_003836326.1| hypothetical protein Micau_3221 [Micromonospora aurantiaca ATCC 27029] gi|237880996|gb|EEP69824.1| hypothetical protein MCAG_00151 [Micromonospora sp. ATCC 39149] gi|302570548|gb|ADL46750.1| protein of unknown function DUF1290 [Micromonospora aurantiaca ATCC 27029] Length=110 Score = 149 bits (375), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 78/110 (71%), Positives = 90/110 (82%), Gaps = 0/110 (0%) Query 12 MIGIAALAVGIVLGLVFHPGVPEVIQPYLPIAVVAALDAVFGGLRAYLERIFDPKVFVVS 71 MI + AL G+VLG+ P VP +QPYLPIAVVAALDAVFGG+RA L+RIFD K FVVS Sbjct 1 MIAVLALLAGVVLGVYLDPTVPAALQPYLPIAVVAALDAVFGGVRAKLDRIFDDKQFVVS 60 Query 72 FVFNVLVAALIVYVGDQLGVGTQLSTAIIVVLGIRIFGNTAALRRRLFGA 121 F+ NVLVA LIVY+GDQLGVG QLST ++VVLG+RIFGN AA+RR LF A Sbjct 61 FISNVLVAGLIVYLGDQLGVGGQLSTGVVVVLGVRIFGNVAAIRRHLFRA 110 >gi|334337078|ref|YP_004542230.1| protein of unknown function DUF1290 [Isoptericola variabilis 225] gi|334107446|gb|AEG44336.1| protein of unknown function DUF1290 [Isoptericola variabilis 225] Length=110 Score = 147 bits (372), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 76/110 (70%), Positives = 91/110 (83%), Gaps = 0/110 (0%) Query 12 MIGIAALAVGIVLGLVFHPGVPEVIQPYLPIAVVAALDAVFGGLRAYLERIFDPKVFVVS 71 MI + L +G+V GLV P VP +QPYLPIAVVAALDA+FGGLRA L+ +FD KVF+VS Sbjct 1 MIAVVGLVIGVVAGLVLQPTVPVALQPYLPIAVVAALDALFGGLRALLDGLFDDKVFLVS 60 Query 72 FVFNVLVAALIVYVGDQLGVGTQLSTAIIVVLGIRIFGNTAALRRRLFGA 121 F+ NVLVAA IV++GDQLGVG+QLSTA++VVLGIRIF N AA+RR LF A Sbjct 61 FLSNVLVAAFIVFLGDQLGVGSQLSTAVVVVLGIRIFSNAAAIRRHLFKA 110 >gi|152967043|ref|YP_001362827.1| hypothetical protein Krad_3099 [Kineococcus radiotolerans SRS30216] gi|151361560|gb|ABS04563.1| protein of unknown function DUF1290 [Kineococcus radiotolerans SRS30216] Length=110 Score = 146 bits (368), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 77/110 (70%), Positives = 89/110 (81%), Gaps = 0/110 (0%) Query 12 MIGIAALAVGIVLGLVFHPGVPEVIQPYLPIAVVAALDAVFGGLRAYLERIFDPKVFVVS 71 MI L VGIV G++ HP VP +QPYLPIAVVAALDAVFGGLRA L+ IFD KVFVVS Sbjct 1 MIAALGLVVGIVAGVLLHPEVPVFLQPYLPIAVVAALDAVFGGLRAVLDGIFDDKVFVVS 60 Query 72 FVFNVLVAALIVYVGDQLGVGTQLSTAIIVVLGIRIFGNTAALRRRLFGA 121 F+ N +VAALIVY+GDQLGVG+QLST ++VVLG+RIF N AA+RR L A Sbjct 61 FLSNAVVAALIVYLGDQLGVGSQLSTGVVVVLGVRIFSNAAAIRRHLLNA 110 >gi|120404117|ref|YP_953946.1| hypothetical protein Mvan_3138 [Mycobacterium vanbaalenii PYR-1] gi|119956935|gb|ABM13940.1| protein of unknown function DUF1290 [Mycobacterium vanbaalenii PYR-1] Length=117 Score = 145 bits (367), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 100/110 (91%), Positives = 102/110 (93%), Gaps = 0/110 (0%) Query 12 MIGIAALAVGIVLGLVFHPGVPEVIQPYLPIAVVAALDAVFGGLRAYLERIFDPKVFVVS 71 +IGI AL VGIVLG+VFHP VPE QPYLPIAVVAALDAVFGGLRAYLE IFD KVFVVS Sbjct 8 LIGIVALVVGIVLGVVFHPDVPEFAQPYLPIAVVAALDAVFGGLRAYLESIFDSKVFVVS 67 Query 72 FVFNVLVAALIVYVGDQLGVGTQLSTAIIVVLGIRIFGNTAALRRRLFGA 121 FVFNVLVAALIVYVGDQLGVGTQLSTAIIVVLGIRIFGN AALRRRLFGA Sbjct 68 FVFNVLVAALIVYVGDQLGVGTQLSTAIIVVLGIRIFGNAAALRRRLFGA 117 >gi|315505910|ref|YP_004084797.1| hypothetical protein ML5_5173 [Micromonospora sp. L5] gi|315412529|gb|ADU10646.1| protein of unknown function DUF1290 [Micromonospora sp. L5] Length=110 Score = 145 bits (365), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 77/110 (70%), Positives = 89/110 (81%), Gaps = 0/110 (0%) Query 12 MIGIAALAVGIVLGLVFHPGVPEVIQPYLPIAVVAALDAVFGGLRAYLERIFDPKVFVVS 71 MI + AL G+VLG+ P VP +QP LPIAVVAALDAVFGG+RA L+RIFD K FVVS Sbjct 1 MIAVLALLAGVVLGVYLDPTVPAALQPDLPIAVVAALDAVFGGVRAKLDRIFDDKQFVVS 60 Query 72 FVFNVLVAALIVYVGDQLGVGTQLSTAIIVVLGIRIFGNTAALRRRLFGA 121 F+ NVLVA LIVY+GDQLGVG QLST ++VVLG+RIFGN AA+RR LF A Sbjct 61 FISNVLVAGLIVYLGDQLGVGGQLSTGVVVVLGVRIFGNVAAIRRHLFRA 110 >gi|291450196|ref|ZP_06589586.1| integral membrane protein [Streptomyces albus J1074] gi|291353145|gb|EFE80047.1| integral membrane protein [Streptomyces albus J1074] Length=110 Score = 145 bits (365), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 77/110 (70%), Positives = 91/110 (83%), Gaps = 0/110 (0%) Query 12 MIGIAALAVGIVLGLVFHPGVPEVIQPYLPIAVVAALDAVFGGLRAYLERIFDPKVFVVS 71 MI + L VG+V GL+ P VP V++PYLPIAVVAALDAVFGGLRA L+ IFD KVFVVS Sbjct 1 MIAVLGLLVGVVAGLLVRPEVPAVVEPYLPIAVVAALDAVFGGLRAMLDGIFDDKVFVVS 60 Query 72 FVFNVLVAALIVYVGDQLGVGTQLSTAIIVVLGIRIFGNTAALRRRLFGA 121 F+ NV+VAALIV++GDQLGVG QLST ++VVLGIRIF N AA+RR +F A Sbjct 61 FLSNVVVAALIVFLGDQLGVGAQLSTGVVVVLGIRIFSNAAAIRRHVFRA 110 >gi|296129734|ref|YP_003636984.1| hypothetical protein Cfla_1888 [Cellulomonas flavigena DSM 20109] gi|296021549|gb|ADG74785.1| protein of unknown function DUF1290 [Cellulomonas flavigena DSM 20109] Length=110 Score = 143 bits (361), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 72/110 (66%), Positives = 91/110 (83%), Gaps = 0/110 (0%) Query 12 MIGIAALAVGIVLGLVFHPGVPEVIQPYLPIAVVAALDAVFGGLRAYLERIFDPKVFVVS 71 MI + L +G++ GL P VP +QPYLPIAVVAALDA+FGGLRAYL+ IFD +VF+ S Sbjct 1 MIAVIGLVLGVLAGLFIEPTVPANLQPYLPIAVVAALDALFGGLRAYLDGIFDERVFLTS 60 Query 72 FVFNVLVAALIVYVGDQLGVGTQLSTAIIVVLGIRIFGNTAALRRRLFGA 121 F+ NV+VAALIV++GDQLGVG+Q++TA+IVVLGIRIF N A++RR LF A Sbjct 61 FLSNVVVAALIVFLGDQLGVGSQMTTAVIVVLGIRIFSNAASIRRHLFKA 110 >gi|269795129|ref|YP_003314584.1| hypothetical protein Sked_18240 [Sanguibacter keddieii DSM 10542] gi|269097314|gb|ACZ21750.1| uncharacterized conserved protein (small basic protein) [Sanguibacter keddieii DSM 10542] Length=110 Score = 143 bits (360), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 75/110 (69%), Positives = 91/110 (83%), Gaps = 0/110 (0%) Query 12 MIGIAALAVGIVLGLVFHPGVPEVIQPYLPIAVVAALDAVFGGLRAYLERIFDPKVFVVS 71 MI + L +G+V GL+ P VP +QPYLPIAVVAALDA+FGGLRA L+ +FD KVF+VS Sbjct 1 MIPVFGLLIGVVAGLLLEPTVPVYLQPYLPIAVVAALDALFGGLRALLDGMFDDKVFLVS 60 Query 72 FVFNVLVAALIVYVGDQLGVGTQLSTAIIVVLGIRIFGNTAALRRRLFGA 121 F+ NV+VAALIV++GDQLGVGTQLST ++VVLGIRIF N AA+RR LF A Sbjct 61 FLSNVVVAALIVFLGDQLGVGTQLSTGVVVVLGIRIFSNAAAIRRHLFKA 110 >gi|290961952|ref|YP_003493134.1| protein [Streptomyces scabiei 87.22] gi|260651478|emb|CBG74600.1| putative integral membrane protein [Streptomyces scabiei 87.22] Length=110 Score = 143 bits (360), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 75/110 (69%), Positives = 91/110 (83%), Gaps = 0/110 (0%) Query 12 MIGIAALAVGIVLGLVFHPGVPEVIQPYLPIAVVAALDAVFGGLRAYLERIFDPKVFVVS 71 MI + L +G+V GL+ P VP V++PYLPIAVVAALDAVFGGLRA L+ IFD KVFVVS Sbjct 1 MIAVLGLVLGVVAGLLVRPEVPAVVEPYLPIAVVAALDAVFGGLRAMLDGIFDDKVFVVS 60 Query 72 FVFNVLVAALIVYVGDQLGVGTQLSTAIIVVLGIRIFGNTAALRRRLFGA 121 F+ NV+VAALIV++GD+LGVG QLST ++VVLGIRIF N AA+RR +F A Sbjct 61 FLSNVVVAALIVFLGDKLGVGAQLSTGVVVVLGIRIFSNAAAIRRHVFRA 110 >gi|336118029|ref|YP_004572797.1| hypothetical protein MLP_23800 [Microlunatus phosphovorus NM-1] gi|334685809|dbj|BAK35394.1| hypothetical protein MLP_23800 [Microlunatus phosphovorus NM-1] Length=110 Score = 142 bits (359), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 72/110 (66%), Positives = 92/110 (84%), Gaps = 0/110 (0%) Query 12 MIGIAALAVGIVLGLVFHPGVPEVIQPYLPIAVVAALDAVFGGLRAYLERIFDPKVFVVS 71 M+ + L VGIV+GL+ P +P +QPYLPIA+VAALDA+FG RAYLE +F +VFV+S Sbjct 1 MLPLIGLLVGIVVGLLLEPTLPLALQPYLPIAIVAALDALFGAFRAYLEGVFSDRVFVIS 60 Query 72 FVFNVLVAALIVYVGDQLGVGTQLSTAIIVVLGIRIFGNTAALRRRLFGA 121 F+ NVL+AALIV+VGDQ+GVG+QLSTA++VVLGIRIF N AA+RR+LF A Sbjct 61 FISNVLIAALIVWVGDQIGVGSQLSTAVVVVLGIRIFTNAAAIRRQLFHA 110 >gi|229820593|ref|YP_002882119.1| hypothetical protein Bcav_2104 [Beutenbergia cavernae DSM 12333] gi|229566506|gb|ACQ80357.1| protein of unknown function DUF1290 [Beutenbergia cavernae DSM 12333] Length=110 Score = 141 bits (355), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 71/110 (65%), Positives = 91/110 (83%), Gaps = 0/110 (0%) Query 12 MIGIAALAVGIVLGLVFHPGVPEVIQPYLPIAVVAALDAVFGGLRAYLERIFDPKVFVVS 71 MI + LA+GI++GL+ P VP +QPYLPIAVVAALDA+FGG+RA L+ +FD +VFV S Sbjct 1 MIAVLGLALGIIVGLIVSPTVPTELQPYLPIAVVAALDALFGGVRARLDGVFDDRVFVTS 60 Query 72 FVFNVLVAALIVYVGDQLGVGTQLSTAIIVVLGIRIFGNTAALRRRLFGA 121 F+ NV+VAAL+V++GDQLGVG QLSTA++VVLGIRIF N A++RR L A Sbjct 61 FLSNVVVAALLVFLGDQLGVGAQLSTAVVVVLGIRIFSNAASIRRSLLKA 110 >gi|117928436|ref|YP_872987.1| hypothetical protein Acel_1229 [Acidothermus cellulolyticus 11B] gi|117648899|gb|ABK53001.1| protein of unknown function DUF1290 [Acidothermus cellulolyticus 11B] Length=118 Score = 141 bits (355), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 71/105 (68%), Positives = 90/105 (86%), Gaps = 0/105 (0%) Query 17 ALAVGIVLGLVFHPGVPEVIQPYLPIAVVAALDAVFGGLRAYLERIFDPKVFVVSFVFNV 76 ALA+GIV+GL+ HP VP +QPYLPIAV+AALDAVFG +RA L+ +FD +VFVVSF+ NV Sbjct 14 ALAIGIVVGLIAHPSVPAGLQPYLPIAVIAALDAVFGAVRAMLDGLFDDRVFVVSFIANV 73 Query 77 LVAALIVYVGDQLGVGTQLSTAIIVVLGIRIFGNTAALRRRLFGA 121 LVAALIV++GDQLGVG+++ST ++VVL IRIF N AA+RR +F A Sbjct 74 LVAALIVFLGDQLGVGSEMSTGVVVVLSIRIFSNAAAIRRHVFRA 118 >gi|309810361|ref|ZP_07704196.1| conserved hypothetical protein [Dermacoccus sp. Ellin185] gi|308435674|gb|EFP59471.1| conserved hypothetical protein [Dermacoccus sp. Ellin185] Length=110 Score = 140 bits (354), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 72/104 (70%), Positives = 88/104 (85%), Gaps = 0/104 (0%) Query 18 LAVGIVLGLVFHPGVPEVIQPYLPIAVVAALDAVFGGLRAYLERIFDPKVFVVSFVFNVL 77 LAVG+ LGL HP VP +QPYLPIAV+AALDA+FGGLRA L+ IFD KVFVVSF+ NV+ Sbjct 7 LAVGLALGLWLHPDVPVWMQPYLPIAVIAALDALFGGLRAALDGIFDDKVFVVSFLSNVV 66 Query 78 VAALIVYVGDQLGVGTQLSTAIIVVLGIRIFGNTAALRRRLFGA 121 VAA IV++GDQLGVG+QLST ++VVLG+RIF N A++RR +F A Sbjct 67 VAAFIVFLGDQLGVGSQLSTGVVVVLGLRIFTNVASIRRHIFKA 110 >gi|145594913|ref|YP_001159210.1| hypothetical protein Strop_2385 [Salinispora tropica CNB-440] gi|145304250|gb|ABP54832.1| protein of unknown function DUF1290 [Salinispora tropica CNB-440] Length=110 Score = 140 bits (353), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 72/93 (78%), Positives = 81/93 (88%), Gaps = 0/93 (0%) Query 29 HPGVPEVIQPYLPIAVVAALDAVFGGLRAYLERIFDPKVFVVSFVFNVLVAALIVYVGDQ 88 P VP +QPYLPIAVVAALDAVFGG+RA L+RIFD K FVVSF+ NVLVAALIVYVGDQ Sbjct 18 DPTVPGALQPYLPIAVVAALDAVFGGVRAKLDRIFDDKQFVVSFISNVLVAALIVYVGDQ 77 Query 89 LGVGTQLSTAIIVVLGIRIFGNTAALRRRLFGA 121 LGVG+QLST ++VVLG+RIFGN AA+RR LF A Sbjct 78 LGVGSQLSTGVVVVLGVRIFGNVAAIRRHLFRA 110 >gi|311894955|dbj|BAJ27363.1| hypothetical protein KSE_15360 [Kitasatospora setae KM-6054] Length=110 Score = 140 bits (352), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 73/110 (67%), Positives = 90/110 (82%), Gaps = 0/110 (0%) Query 12 MIGIAALAVGIVLGLVFHPGVPEVIQPYLPIAVVAALDAVFGGLRAYLERIFDPKVFVVS 71 MI + L +G+V+G+ P VP + PYLPIAVVAALDAVFGG+RA L+ IFD KVFVVS Sbjct 1 MIAVLGLLIGVVVGVFVQPEVPNAVVPYLPIAVVAALDAVFGGVRAMLDGIFDDKVFVVS 60 Query 72 FVFNVLVAALIVYVGDQLGVGTQLSTAIIVVLGIRIFGNTAALRRRLFGA 121 F+ NV+VAALIV++GDQLGVG+QLST ++VVLGIRIF N AA+RR +F A Sbjct 61 FLSNVVVAALIVFLGDQLGVGSQLSTGVVVVLGIRIFSNAAAIRRHVFRA 110 >gi|254386007|ref|ZP_05001323.1| integral membrane protein [Streptomyces sp. Mg1] gi|194344868|gb|EDX25834.1| integral membrane protein [Streptomyces sp. Mg1] Length=110 Score = 140 bits (352), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 75/110 (69%), Positives = 89/110 (81%), Gaps = 0/110 (0%) Query 12 MIGIAALAVGIVLGLVFHPGVPEVIQPYLPIAVVAALDAVFGGLRAYLERIFDPKVFVVS 71 MI + L G+V GL+ P VP V++PYLPIAVVAALDAVFGGLRA L+ IF KVFVVS Sbjct 1 MIAVLGLVAGVVAGLLVRPEVPAVVEPYLPIAVVAALDAVFGGLRAMLDGIFVDKVFVVS 60 Query 72 FVFNVLVAALIVYVGDQLGVGTQLSTAIIVVLGIRIFGNTAALRRRLFGA 121 F+ NV+VAALIV++GDQLGVG QLST ++VVLGIRIF N AA+RR +F A Sbjct 61 FLSNVVVAALIVFLGDQLGVGAQLSTGVVVVLGIRIFSNAAAIRRHVFRA 110 >gi|302533234|ref|ZP_07285576.1| integral membrane protein [Streptomyces sp. C] gi|302442129|gb|EFL13945.1| integral membrane protein [Streptomyces sp. C] Length=110 Score = 139 bits (351), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 74/110 (68%), Positives = 91/110 (83%), Gaps = 0/110 (0%) Query 12 MIGIAALAVGIVLGLVFHPGVPEVIQPYLPIAVVAALDAVFGGLRAYLERIFDPKVFVVS 71 MI + L G+V+GL+ P VP V++PYLPIAVVAALDAVFGGLRA L+ IF KVFVVS Sbjct 1 MIAVLGLLAGVVVGLLVRPEVPAVVEPYLPIAVVAALDAVFGGLRAMLDGIFVDKVFVVS 60 Query 72 FVFNVLVAALIVYVGDQLGVGTQLSTAIIVVLGIRIFGNTAALRRRLFGA 121 F+ NV+VAALIV++GD+LGVG+QLST ++VVLGIRIF N AA+RR +F A Sbjct 61 FLSNVVVAALIVFLGDKLGVGSQLSTGVVVVLGIRIFSNAAAIRRHVFRA 110 >gi|326331333|ref|ZP_08197624.1| small basic protein [Nocardioidaceae bacterium Broad-1] gi|325950867|gb|EGD42916.1| small basic protein [Nocardioidaceae bacterium Broad-1] Length=110 Score = 139 bits (351), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 75/110 (69%), Positives = 89/110 (81%), Gaps = 0/110 (0%) Query 12 MIGIAALAVGIVLGLVFHPGVPEVIQPYLPIAVVAALDAVFGGLRAYLERIFDPKVFVVS 71 MI + L +GIVLGL F P VP + PYLPIAVVAALDAVFG LRA+++ IFD KVFVVS Sbjct 1 MIAVIGLVIGIVLGLFFQPEVPVGLAPYLPIAVVAALDAVFGALRAFMDGIFDDKVFVVS 60 Query 72 FVFNVLVAALIVYVGDQLGVGTQLSTAIIVVLGIRIFGNTAALRRRLFGA 121 F+ NV++AA IVY+GD+LGVG QLST +IVVLGIRIF N AA+RR +F A Sbjct 61 FISNVVIAAGIVYLGDRLGVGGQLSTGVIVVLGIRIFTNVAAIRRHIFHA 110 >gi|226306714|ref|YP_002766674.1| hypothetical protein RER_32270 [Rhodococcus erythropolis PR4] gi|229494871|ref|ZP_04388624.1| integral membrane protein [Rhodococcus erythropolis SK121] gi|226185831|dbj|BAH33935.1| conserved hypothetical membrane protein [Rhodococcus erythropolis PR4] gi|229318229|gb|EEN84097.1| integral membrane protein [Rhodococcus erythropolis SK121] Length=116 Score = 139 bits (349), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 94/110 (86%), Positives = 103/110 (94%), Gaps = 0/110 (0%) Query 12 MIGIAALAVGIVLGLVFHPGVPEVIQPYLPIAVVAALDAVFGGLRAYLERIFDPKVFVVS 71 + G+AAL VGIVLG+VF P VP+VIQPYLPIAVVAALDAVFGGLRAYL+ IFD KVFVVS Sbjct 7 LYGLAALVVGIVLGVVFSPQVPDVIQPYLPIAVVAALDAVFGGLRAYLDEIFDAKVFVVS 66 Query 72 FVFNVLVAALIVYVGDQLGVGTQLSTAIIVVLGIRIFGNTAALRRRLFGA 121 FVFNVLVA+LIV++GDQLGVGTQLSTAI+VVLGIRIFGN AALRRRLFGA Sbjct 67 FVFNVLVASLIVWLGDQLGVGTQLSTAIVVVLGIRIFGNAAALRRRLFGA 116 >gi|256832536|ref|YP_003161263.1| hypothetical protein Jden_1304 [Jonesia denitrificans DSM 20603] gi|256686067|gb|ACV08960.1| protein of unknown function DUF1290 [Jonesia denitrificans DSM 20603] Length=110 Score = 139 bits (349), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 70/110 (64%), Positives = 89/110 (81%), Gaps = 0/110 (0%) Query 12 MIGIAALAVGIVLGLVFHPGVPEVIQPYLPIAVVAALDAVFGGLRAYLERIFDPKVFVVS 71 MI LA+G++ GLV P VP +QPYLPIAVVAALDA+FGG RA L+ +FD +VF++S Sbjct 1 MIPFLGLAIGVIAGLVLEPTVPSYLQPYLPIAVVAALDALFGGFRALLDGLFDDRVFLIS 60 Query 72 FVFNVLVAALIVYVGDQLGVGTQLSTAIIVVLGIRIFGNTAALRRRLFGA 121 F+ NV+VAA IV++GDQ+GVG+QLST +IVVLGIRIF N AA+RR +F A Sbjct 61 FLSNVVVAAFIVFLGDQIGVGSQLSTGVIVVLGIRIFSNVAAIRRHIFKA 110 >gi|333028454|ref|ZP_08456518.1| hypothetical protein STTU_5958 [Streptomyces sp. Tu6071] gi|332748306|gb|EGJ78747.1| hypothetical protein STTU_5958 [Streptomyces sp. Tu6071] Length=102 Score = 138 bits (348), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 72/101 (72%), Positives = 86/101 (86%), Gaps = 0/101 (0%) Query 21 GIVLGLVFHPGVPEVIQPYLPIAVVAALDAVFGGLRAYLERIFDPKVFVVSFVFNVLVAA 80 G+V+GL P VP V++PYLPIAVVAALDAVFGGLRA L+ IFD KVFVVSF+ NV+VAA Sbjct 2 GVVVGLFVRPEVPAVVEPYLPIAVVAALDAVFGGLRAMLDGIFDDKVFVVSFLSNVVVAA 61 Query 81 LIVYVGDQLGVGTQLSTAIIVVLGIRIFGNTAALRRRLFGA 121 LIV++GD+LGVG QLST ++VVLGIRIF N AA+RR +F A Sbjct 62 LIVFLGDKLGVGAQLSTGVVVVLGIRIFSNAAAIRRHVFRA 102 >gi|159038104|ref|YP_001537357.1| hypothetical protein Sare_2523 [Salinispora arenicola CNS-205] gi|157916939|gb|ABV98366.1| protein of unknown function DUF1290 [Salinispora arenicola CNS-205] Length=110 Score = 138 bits (348), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 70/93 (76%), Positives = 80/93 (87%), Gaps = 0/93 (0%) Query 29 HPGVPEVIQPYLPIAVVAALDAVFGGLRAYLERIFDPKVFVVSFVFNVLVAALIVYVGDQ 88 P VP +QPYLPIAVVAALDAVFGG+RA L+RIFD K FVVSF+ NVLVA LIVY+GDQ Sbjct 18 DPTVPAALQPYLPIAVVAALDAVFGGVRAKLDRIFDDKQFVVSFISNVLVAGLIVYLGDQ 77 Query 89 LGVGTQLSTAIIVVLGIRIFGNTAALRRRLFGA 121 LGVG+QLST ++VVLG+RIFGN AA+RR LF A Sbjct 78 LGVGSQLSTGVVVVLGVRIFGNVAAIRRHLFRA 110 >gi|325674352|ref|ZP_08154041.1| small basic protein [Rhodococcus equi ATCC 33707] gi|325555032|gb|EGD24705.1| small basic protein [Rhodococcus equi ATCC 33707] Length=118 Score = 138 bits (347), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 92/110 (84%), Positives = 101/110 (92%), Gaps = 0/110 (0%) Query 12 MIGIAALAVGIVLGLVFHPGVPEVIQPYLPIAVVAALDAVFGGLRAYLERIFDPKVFVVS 71 + G+ AL VGIV+G+VF P VP+ +QPYLPIAVVAALDAVFGGLRAYL+ IFD KVFVVS Sbjct 9 LYGVLALVVGIVVGVVFSPQVPDAVQPYLPIAVVAALDAVFGGLRAYLDEIFDSKVFVVS 68 Query 72 FVFNVLVAALIVYVGDQLGVGTQLSTAIIVVLGIRIFGNTAALRRRLFGA 121 FVFNVLVAALIV++GDQLGVGTQLSTAIIVVLGIRIFGN AALRRRLFGA Sbjct 69 FVFNVLVAALIVWLGDQLGVGTQLSTAIIVVLGIRIFGNAAALRRRLFGA 118 >gi|312139837|ref|YP_004007173.1| integral membrane protein [Rhodococcus equi 103S] gi|311889176|emb|CBH48490.1| putative integral membrane protein [Rhodococcus equi 103S] Length=116 Score = 137 bits (346), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 92/110 (84%), Positives = 101/110 (92%), Gaps = 0/110 (0%) Query 12 MIGIAALAVGIVLGLVFHPGVPEVIQPYLPIAVVAALDAVFGGLRAYLERIFDPKVFVVS 71 + G+ AL VGIV+G+VF P VP+ +QPYLPIAVVAALDAVFGGLRAYL+ IFD KVFVVS Sbjct 7 LYGVLALVVGIVVGVVFSPQVPDAVQPYLPIAVVAALDAVFGGLRAYLDEIFDSKVFVVS 66 Query 72 FVFNVLVAALIVYVGDQLGVGTQLSTAIIVVLGIRIFGNTAALRRRLFGA 121 FVFNVLVAALIV++GDQLGVGTQLSTAIIVVLGIRIFGN AALRRRLFGA Sbjct 67 FVFNVLVAALIVWLGDQLGVGTQLSTAIIVVLGIRIFGNAAALRRRLFGA 116 >gi|256825328|ref|YP_003149288.1| hypothetical protein Ksed_15000 [Kytococcus sedentarius DSM 20547] gi|256688721|gb|ACV06523.1| uncharacterized conserved protein (small basic protein) [Kytococcus sedentarius DSM 20547] Length=110 Score = 135 bits (341), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 72/110 (66%), Positives = 86/110 (79%), Gaps = 0/110 (0%) Query 12 MIGIAALAVGIVLGLVFHPGVPEVIQPYLPIAVVAALDAVFGGLRAYLERIFDPKVFVVS 71 MI I L +GIVLG+ P VP ++PYLPIAV+AALDAVFGG RA LE IF KVFVVS Sbjct 1 MIPIVGLVLGIVLGVWLQPDVPLWLEPYLPIAVIAALDAVFGGARAALEGIFSEKVFVVS 60 Query 72 FVFNVLVAALIVYVGDQLGVGTQLSTAIIVVLGIRIFGNTAALRRRLFGA 121 F+ NV+VAA IV++GDQLGVG QL+T ++VVLG+RIF N A +RR LF A Sbjct 61 FLSNVVVAAFIVWIGDQLGVGAQLTTGVVVVLGLRIFSNVAGIRRHLFHA 110 >gi|311742447|ref|ZP_07716256.1| small basic protein [Aeromicrobium marinum DSM 15272] gi|311314075|gb|EFQ83983.1| small basic protein [Aeromicrobium marinum DSM 15272] Length=110 Score = 135 bits (339), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 68/110 (62%), Positives = 88/110 (80%), Gaps = 0/110 (0%) Query 12 MIGIAALAVGIVLGLVFHPGVPEVIQPYLPIAVVAALDAVFGGLRAYLERIFDPKVFVVS 71 MI + L VG+ GL+ P VP +QPYLPIA++AALDAV G +RA E+ FD +VFV+S Sbjct 1 MIPVIGLVVGVTAGLLLQPTVPLALQPYLPIAIIAALDAVVGAVRALGEKRFDDRVFVIS 60 Query 72 FVFNVLVAALIVYVGDQLGVGTQLSTAIIVVLGIRIFGNTAALRRRLFGA 121 F+ NV++AALIV++GDQLGVG+QLST ++VVLGIRIF N AA+RRR+F A Sbjct 61 FISNVVIAALIVFLGDQLGVGSQLSTGVVVVLGIRIFANAAAIRRRIFRA 110 >gi|317124949|ref|YP_004099061.1| hypothetical protein Intca_1822 [Intrasporangium calvum DSM 43043] gi|315589037|gb|ADU48334.1| protein of unknown function DUF1290 [Intrasporangium calvum DSM 43043] Length=110 Score = 134 bits (337), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 71/110 (65%), Positives = 88/110 (80%), Gaps = 0/110 (0%) Query 12 MIGIAALAVGIVLGLVFHPGVPEVIQPYLPIAVVAALDAVFGGLRAYLERIFDPKVFVVS 71 MI L VG+ +GL+ P VP IQPYLPIAV+AALDAVFG +RA L+ IF+ KVFVVS Sbjct 1 MIPALGLLVGLTIGLLVDPAVPVWIQPYLPIAVIAALDAVFGAVRAVLDGIFNDKVFVVS 60 Query 72 FVFNVLVAALIVYVGDQLGVGTQLSTAIIVVLGIRIFGNTAALRRRLFGA 121 F+ NV+VAA IV++GDQLGVG+QLST ++VVLG+RIF N A++RR LF A Sbjct 61 FLSNVIVAAFIVFLGDQLGVGSQLSTGVVVVLGVRIFSNVASIRRHLFRA 110 >gi|332670441|ref|YP_004453449.1| hypothetical protein Celf_1932 [Cellulomonas fimi ATCC 484] gi|332339479|gb|AEE46062.1| protein of unknown function DUF1290 [Cellulomonas fimi ATCC 484] Length=110 Score = 133 bits (335), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 67/93 (73%), Positives = 80/93 (87%), Gaps = 0/93 (0%) Query 29 HPGVPEVIQPYLPIAVVAALDAVFGGLRAYLERIFDPKVFVVSFVFNVLVAALIVYVGDQ 88 P VP +QPYLPIAVVAALDA+FGGLRA L+ IFD +VF+ SF+ NV+VAALIV++GDQ Sbjct 18 QPTVPVELQPYLPIAVVAALDALFGGLRAMLDGIFDDRVFLTSFLSNVVVAALIVFLGDQ 77 Query 89 LGVGTQLSTAIIVVLGIRIFGNTAALRRRLFGA 121 LGVGTQLSTA++VVLGIRIF N A++RR LF A Sbjct 78 LGVGTQLSTAVVVVLGIRIFSNAASIRRHLFKA 110 >gi|256392311|ref|YP_003113875.1| hypothetical protein Caci_3125 [Catenulispora acidiphila DSM 44928] gi|256358537|gb|ACU72034.1| protein of unknown function DUF1290 [Catenulispora acidiphila DSM 44928] Length=110 Score = 133 bits (334), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 79/110 (72%), Positives = 92/110 (84%), Gaps = 0/110 (0%) Query 12 MIGIAALAVGIVLGLVFHPGVPEVIQPYLPIAVVAALDAVFGGLRAYLERIFDPKVFVVS 71 MI L +G++ G+VFHP VPE + PYLPIAVVAALDAVFGGLRA L+ IFD KVFVVS Sbjct 1 MIAAIGLVIGVIAGVVFHPTVPEGLAPYLPIAVVAALDAVFGGLRALLDGIFDDKVFVVS 60 Query 72 FVFNVLVAALIVYVGDQLGVGTQLSTAIIVVLGIRIFGNTAALRRRLFGA 121 FV NVLVAALIVY+GDQLGVG+QL+T ++VVLGIRIF N AA+RR +F A Sbjct 61 FVSNVLVAALIVYLGDQLGVGSQLTTGVVVVLGIRIFSNAAAIRRHIFHA 110 >gi|295840150|ref|ZP_06827083.1| conserved hypothetical protein [Streptomyces sp. SPB74] gi|302517869|ref|ZP_07270211.1| integral membrane protein [Streptomyces sp. SPB78] gi|318059845|ref|ZP_07978568.1| integral membrane protein [Streptomyces sp. SA3_actG] gi|318078585|ref|ZP_07985917.1| integral membrane protein [Streptomyces sp. SA3_actF] gi|197698081|gb|EDY45014.1| conserved hypothetical protein [Streptomyces sp. SPB74] gi|302426764|gb|EFK98579.1| integral membrane protein [Streptomyces sp. SPB78] Length=110 Score = 132 bits (332), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 68/93 (74%), Positives = 80/93 (87%), Gaps = 0/93 (0%) Query 29 HPGVPEVIQPYLPIAVVAALDAVFGGLRAYLERIFDPKVFVVSFVFNVLVAALIVYVGDQ 88 P VP V++PYLPIAVVAALDAVFGGLRA L+ IFD KVFVVSF+ NV+VAALIV++GD+ Sbjct 18 RPEVPAVVEPYLPIAVVAALDAVFGGLRAMLDGIFDDKVFVVSFLSNVVVAALIVFLGDK 77 Query 89 LGVGTQLSTAIIVVLGIRIFGNTAALRRRLFGA 121 LGVG QLST ++VVLGIRIF N AA+RR +F A Sbjct 78 LGVGAQLSTGVVVVLGIRIFSNAAAIRRHVFRA 110 >gi|84496379|ref|ZP_00995233.1| putative membrane protein [Janibacter sp. HTCC2649] gi|84383147|gb|EAP99028.1| putative membrane protein [Janibacter sp. HTCC2649] Length=110 Score = 132 bits (332), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 69/110 (63%), Positives = 87/110 (80%), Gaps = 0/110 (0%) Query 12 MIGIAALAVGIVLGLVFHPGVPEVIQPYLPIAVVAALDAVFGGLRAYLERIFDPKVFVVS 71 MI L GIV G++ P VP +QPYLPIAV+AALDAVFG +RA L+ IF+ KVFV+S Sbjct 1 MIPALGLVFGIVAGVLLQPEVPLWLQPYLPIAVIAALDAVFGAVRAVLDGIFNDKVFVIS 60 Query 72 FVFNVLVAALIVYVGDQLGVGTQLSTAIIVVLGIRIFGNTAALRRRLFGA 121 F+ NV+VAA IV++GDQLGVG+QLST ++VVLG+RIF N A++RR LF A Sbjct 61 FLSNVVVAAFIVFLGDQLGVGSQLSTGVVVVLGVRIFSNVASIRRHLFNA 110 Lambda K H 0.331 0.147 0.432 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 128028430332 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40