BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv1827
Length=162
Score E
Sequences producing significant alignments: (Bits) Value
gi|15608964|ref|NP_216343.1| hypothetical protein Rv1827 [Mycoba... 322 9e-87
gi|240104237|pdb|2KFU|A Chain A, Pknb-Phosphorylated Rv1827 321 2e-86
gi|296164813|ref|ZP_06847372.1| FHA-domain-containing protein [M... 297 4e-79
gi|240171751|ref|ZP_04750410.1| hypothetical protein MkanA1_2072... 289 9e-77
gi|254823239|ref|ZP_05228240.1| forkhead-associated protein [Myc... 289 1e-76
gi|41407638|ref|NP_960474.1| hypothetical protein MAP1540 [Mycob... 285 2e-75
gi|254775364|ref|ZP_05216880.1| forkhead-associated protein [Myc... 283 5e-75
gi|342861269|ref|ZP_08717917.1| forkhead-associated protein [Myc... 282 1e-74
gi|15828122|ref|NP_302385.1| hypothetical protein ML2076 [Mycoba... 276 6e-73
gi|183982711|ref|YP_001851002.1| hypothetical protein MMAR_2704 ... 275 2e-72
gi|118618435|ref|YP_906767.1| hypothetical protein MUL_3046 [Myc... 271 2e-71
gi|333990562|ref|YP_004523176.1| hypothetical protein JDM601_192... 264 4e-69
gi|251836811|pdb|2KKL|A Chain A, Solution Nmr Structure Of Fha D... 260 6e-68
gi|169629489|ref|YP_001703138.1| hypothetical protein MAB_2403 [... 257 4e-67
gi|289750400|ref|ZP_06509778.1| hypothetical protein cfp17 [Myco... 257 4e-67
gi|6409242|gb|AAF07901.1|AF173844_2 putative signal transduction... 256 8e-67
gi|145223988|ref|YP_001134666.1| FHA domain-containing protein [... 253 5e-66
gi|108799810|ref|YP_640007.1| FHA domain-containing protein [Myc... 252 1e-65
gi|120404114|ref|YP_953943.1| FHA domain-containing protein [Myc... 252 1e-65
gi|315444320|ref|YP_004077199.1| FHA domain-containing protein [... 252 1e-65
gi|118471814|ref|YP_887950.1| forkhead-associated protein [Mycob... 249 1e-64
gi|312139833|ref|YP_004007169.1| transcriptional regulator [Rhod... 232 1e-59
gi|333920803|ref|YP_004494384.1| putative signal transduction pr... 227 4e-58
gi|111017924|ref|YP_700896.1| hypothetical protein RHA1_ro00906 ... 227 4e-58
gi|23821219|emb|CAD52977.1| hypothetical protein [Rhodococcus fa... 226 1e-57
gi|229494859|ref|ZP_04388612.1| FHA domain containing protein [R... 224 4e-57
gi|226306711|ref|YP_002766671.1| signal transduction protein Gar... 224 4e-57
gi|262202678|ref|YP_003273886.1| Forkhead-associated protein [Go... 222 2e-56
gi|343928464|ref|ZP_08767912.1| signal transduction protein GarA... 217 4e-55
gi|54024455|ref|YP_118697.1| hypothetical protein nfa24860 [Noca... 215 2e-54
gi|296394669|ref|YP_003659553.1| FHA domain-containing protein [... 214 3e-54
gi|213965994|ref|ZP_03394184.1| oxoglutarate dehydrogenase inhib... 214 4e-54
gi|319949170|ref|ZP_08023259.1| forkhead-associated protein [Die... 214 5e-54
gi|324997671|ref|ZP_08118783.1| FHA domain containing protein [P... 211 2e-53
gi|326384965|ref|ZP_08206639.1| Forkhead-associated protein [Gor... 211 2e-53
gi|317506031|ref|ZP_07963861.1| FHA domain-containing protein [S... 210 5e-53
gi|256379361|ref|YP_003103021.1| FHA domain containing protein [... 210 5e-53
gi|172040753|ref|YP_001800467.1| inhibitor of ODH activity [Cory... 209 1e-52
gi|334564212|ref|ZP_08517203.1| hypothetical protein CbovD2_0651... 209 1e-52
gi|340794265|ref|YP_004759728.1| inhibitor of ODH activity [Cory... 209 1e-52
gi|302527602|ref|ZP_07279944.1| FHA domain-containing protein [S... 208 2e-52
gi|300786867|ref|YP_003767158.1| FHA domain-containing protein [... 208 3e-52
gi|336325542|ref|YP_004605508.1| oxoglutarate dehydrogenase inhi... 207 3e-52
gi|331696970|ref|YP_004333209.1| FHA domain-containing protein [... 206 9e-52
gi|68535980|ref|YP_250685.1| hypothetical protein jk0903 [Coryne... 206 1e-51
gi|257056262|ref|YP_003134094.1| FHA domain-containing protein [... 205 2e-51
gi|237785461|ref|YP_002906166.1| inhibitor of ODH activity [Cory... 202 9e-51
gi|296140042|ref|YP_003647285.1| FHA domain-containing protein [... 202 2e-50
gi|134100380|ref|YP_001106041.1| FHA domain-containing protein [... 201 3e-50
gi|19552656|ref|NP_600658.1| FHA-domain-containing protein [Cory... 198 3e-49
>gi|15608964|ref|NP_216343.1| hypothetical protein Rv1827 [Mycobacterium tuberculosis H37Rv]
gi|15841297|ref|NP_336334.1| garA protein [Mycobacterium tuberculosis CDC1551]
gi|31793017|ref|NP_855510.1| hypothetical protein Mb1858 [Mycobacterium bovis AF2122/97]
80 more sequence titles
Length=162
Score = 322 bits (826), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 161/162 (99%), Positives = 162/162 (100%), Gaps = 0/162 (0%)
Query 1 VTDMNPDIEKDQTSDEVTVETTSVFRADFLSELDAPAQAGTESAVSGVEGLPPGSALLVV 60
+TDMNPDIEKDQTSDEVTVETTSVFRADFLSELDAPAQAGTESAVSGVEGLPPGSALLVV
Sbjct 1 MTDMNPDIEKDQTSDEVTVETTSVFRADFLSELDAPAQAGTESAVSGVEGLPPGSALLVV 60
Query 61 KRGPNAGSRFLLDQAITSAGRHPDSDIFLDDVTVSRRHAEFRLENNEFNVVDVGSLNGTY 120
KRGPNAGSRFLLDQAITSAGRHPDSDIFLDDVTVSRRHAEFRLENNEFNVVDVGSLNGTY
Sbjct 61 KRGPNAGSRFLLDQAITSAGRHPDSDIFLDDVTVSRRHAEFRLENNEFNVVDVGSLNGTY 120
Query 121 VNREPVDSAVLANGDEVQIGKFRLVFLTGPKQGEDDGSTGGP 162
VNREPVDSAVLANGDEVQIGKFRLVFLTGPKQGEDDGSTGGP
Sbjct 121 VNREPVDSAVLANGDEVQIGKFRLVFLTGPKQGEDDGSTGGP 162
>gi|240104237|pdb|2KFU|A Chain A, Pknb-Phosphorylated Rv1827
Length=162
Score = 321 bits (823), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 161/162 (99%), Positives = 161/162 (99%), Gaps = 0/162 (0%)
Query 1 VTDMNPDIEKDQTSDEVTVETTSVFRADFLSELDAPAQAGTESAVSGVEGLPPGSALLVV 60
VTDMNPDIEKDQTSDEVTVET SVFRADFLSELDAPAQAGTESAVSGVEGLPPGSALLVV
Sbjct 1 VTDMNPDIEKDQTSDEVTVETXSVFRADFLSELDAPAQAGTESAVSGVEGLPPGSALLVV 60
Query 61 KRGPNAGSRFLLDQAITSAGRHPDSDIFLDDVTVSRRHAEFRLENNEFNVVDVGSLNGTY 120
KRGPNAGSRFLLDQAITSAGRHPDSDIFLDDVTVSRRHAEFRLENNEFNVVDVGSLNGTY
Sbjct 61 KRGPNAGSRFLLDQAITSAGRHPDSDIFLDDVTVSRRHAEFRLENNEFNVVDVGSLNGTY 120
Query 121 VNREPVDSAVLANGDEVQIGKFRLVFLTGPKQGEDDGSTGGP 162
VNREPVDSAVLANGDEVQIGKFRLVFLTGPKQGEDDGSTGGP
Sbjct 121 VNREPVDSAVLANGDEVQIGKFRLVFLTGPKQGEDDGSTGGP 162
>gi|296164813|ref|ZP_06847372.1| FHA-domain-containing protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295899827|gb|EFG79274.1| FHA-domain-containing protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=160
Score = 297 bits (760), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 150/160 (94%), Positives = 154/160 (97%), Gaps = 0/160 (0%)
Query 1 VTDMNPDIEKDQTSDEVTVETTSVFRADFLSELDAPAQAGTESAVSGVEGLPPGSALLVV 60
+TDM+ D+ KDQTSDEVTVETTSVFRADFL+ELDAPAQAGTESAVSGVEGLP GSALLVV
Sbjct 1 MTDMDSDMGKDQTSDEVTVETTSVFRADFLNELDAPAQAGTESAVSGVEGLPAGSALLVV 60
Query 61 KRGPNAGSRFLLDQAITSAGRHPDSDIFLDDVTVSRRHAEFRLENNEFNVVDVGSLNGTY 120
KRGPNAGSRFLLDQ ITSAGRHPDSDIFLDDVTVSRRHAEFRLENNEFNVVDVGSLNGTY
Sbjct 61 KRGPNAGSRFLLDQPITSAGRHPDSDIFLDDVTVSRRHAEFRLENNEFNVVDVGSLNGTY 120
Query 121 VNREPVDSAVLANGDEVQIGKFRLVFLTGPKQGEDDGSTG 160
VNREPVDSAVLANGDEVQIGKFRLVFLTGPKQGED GS G
Sbjct 121 VNREPVDSAVLANGDEVQIGKFRLVFLTGPKQGEDGGSGG 160
>gi|240171751|ref|ZP_04750410.1| hypothetical protein MkanA1_20725 [Mycobacterium kansasii ATCC
12478]
Length=162
Score = 289 bits (740), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 146/160 (92%), Positives = 152/160 (95%), Gaps = 0/160 (0%)
Query 1 VTDMNPDIEKDQTSDEVTVETTSVFRADFLSELDAPAQAGTESAVSGVEGLPPGSALLVV 60
+TDM+ + +DQTSDEVTVETTSVFRADFLSELDAPAQAGTESAVSGVEGLP GSALLVV
Sbjct 1 MTDMDAERGQDQTSDEVTVETTSVFRADFLSELDAPAQAGTESAVSGVEGLPAGSALLVV 60
Query 61 KRGPNAGSRFLLDQAITSAGRHPDSDIFLDDVTVSRRHAEFRLENNEFNVVDVGSLNGTY 120
KRGPNAGSRFLLDQ ITSAGRHPDSDIFLDDVTVSRRHAEFRLE NEF+VVDVGSLNGTY
Sbjct 61 KRGPNAGSRFLLDQPITSAGRHPDSDIFLDDVTVSRRHAEFRLEGNEFSVVDVGSLNGTY 120
Query 121 VNREPVDSAVLANGDEVQIGKFRLVFLTGPKQGEDDGSTG 160
VNREPVDSAVLANGDEVQIGKFRLVFLTGPKQG+DDG G
Sbjct 121 VNREPVDSAVLANGDEVQIGKFRLVFLTGPKQGDDDGGAG 160
>gi|254823239|ref|ZP_05228240.1| forkhead-associated protein [Mycobacterium intracellulare ATCC
13950]
Length=160
Score = 289 bits (739), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 145/160 (91%), Positives = 152/160 (95%), Gaps = 0/160 (0%)
Query 1 VTDMNPDIEKDQTSDEVTVETTSVFRADFLSELDAPAQAGTESAVSGVEGLPPGSALLVV 60
+TDM+ ++DQ SDEVTVETTSVFRADFL+ELDAPAQAGTESAVSGVEGLP GSALLVV
Sbjct 1 MTDMDSGSQQDQNSDEVTVETTSVFRADFLNELDAPAQAGTESAVSGVEGLPAGSALLVV 60
Query 61 KRGPNAGSRFLLDQAITSAGRHPDSDIFLDDVTVSRRHAEFRLENNEFNVVDVGSLNGTY 120
KRGPNAGSRFLLDQ TSAGRHPDSDIFLDDVTVSRRHAEFRLENNEF+VVDVGSLNGTY
Sbjct 61 KRGPNAGSRFLLDQPTTSAGRHPDSDIFLDDVTVSRRHAEFRLENNEFSVVDVGSLNGTY 120
Query 121 VNREPVDSAVLANGDEVQIGKFRLVFLTGPKQGEDDGSTG 160
VNREPVDSAVLANGDEVQIGKFRLVFLTGPKQGED GS+G
Sbjct 121 VNREPVDSAVLANGDEVQIGKFRLVFLTGPKQGEDGGSSG 160
>gi|41407638|ref|NP_960474.1| hypothetical protein MAP1540 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|118465674|ref|YP_882074.1| forkhead-associated protein [Mycobacterium avium 104]
gi|41395991|gb|AAS03857.1| hypothetical protein MAP_1540 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|118166961|gb|ABK67858.1| forkhead-associated protein [Mycobacterium avium 104]
gi|336457590|gb|EGO36595.1| FHA domain-containing protein [Mycobacterium avium subsp. paratuberculosis
S397]
Length=159
Score = 285 bits (729), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 145/160 (91%), Positives = 151/160 (95%), Gaps = 1/160 (0%)
Query 1 VTDMNPDIEKDQTSDEVTVETTSVFRADFLSELDAPAQAGTESAVSGVEGLPPGSALLVV 60
+TDM+ +DQ DEVTVETTSVFRADFL+ELDAPAQAGTESAVSGVEGLP GSALLVV
Sbjct 1 MTDMDSG-SQDQNGDEVTVETTSVFRADFLNELDAPAQAGTESAVSGVEGLPAGSALLVV 59
Query 61 KRGPNAGSRFLLDQAITSAGRHPDSDIFLDDVTVSRRHAEFRLENNEFNVVDVGSLNGTY 120
KRGPNAGSRFLLDQA TSAGRHPDSDIFLDDVTVSRRHAEFRLENNEF+VVDVGSLNGTY
Sbjct 60 KRGPNAGSRFLLDQATTSAGRHPDSDIFLDDVTVSRRHAEFRLENNEFSVVDVGSLNGTY 119
Query 121 VNREPVDSAVLANGDEVQIGKFRLVFLTGPKQGEDDGSTG 160
VNREPVDSAVLANGDEVQIGKFRLVFLTGPKQGED GS+G
Sbjct 120 VNREPVDSAVLANGDEVQIGKFRLVFLTGPKQGEDGGSSG 159
>gi|254775364|ref|ZP_05216880.1| forkhead-associated protein [Mycobacterium avium subsp. avium
ATCC 25291]
Length=156
Score = 283 bits (725), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 142/151 (95%), Positives = 146/151 (97%), Gaps = 0/151 (0%)
Query 10 KDQTSDEVTVETTSVFRADFLSELDAPAQAGTESAVSGVEGLPPGSALLVVKRGPNAGSR 69
+DQ DEVTVETTSVFRADFL+ELDAPAQAGTESAVSGVEGLP GSALLVVKRGPNAGSR
Sbjct 6 QDQNGDEVTVETTSVFRADFLNELDAPAQAGTESAVSGVEGLPAGSALLVVKRGPNAGSR 65
Query 70 FLLDQAITSAGRHPDSDIFLDDVTVSRRHAEFRLENNEFNVVDVGSLNGTYVNREPVDSA 129
FLLDQA TSAGRHPDSDIFLDDVTVSRRHAEFRLENNEF+VVDVGSLNGTYVNREPVDSA
Sbjct 66 FLLDQATTSAGRHPDSDIFLDDVTVSRRHAEFRLENNEFSVVDVGSLNGTYVNREPVDSA 125
Query 130 VLANGDEVQIGKFRLVFLTGPKQGEDDGSTG 160
VLANGDEVQIGKFRLVFLTGPKQGED GS+G
Sbjct 126 VLANGDEVQIGKFRLVFLTGPKQGEDGGSSG 156
>gi|342861269|ref|ZP_08717917.1| forkhead-associated protein [Mycobacterium colombiense CECT 3035]
gi|342131169|gb|EGT84450.1| forkhead-associated protein [Mycobacterium colombiense CECT 3035]
Length=153
Score = 282 bits (722), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 142/153 (93%), Positives = 147/153 (97%), Gaps = 0/153 (0%)
Query 8 IEKDQTSDEVTVETTSVFRADFLSELDAPAQAGTESAVSGVEGLPPGSALLVVKRGPNAG 67
++ DQ SDEVTVETTSVFRADFL+ELDAPAQAGTESAVSGVEGLP GSALLVVKRGPNAG
Sbjct 1 MDNDQNSDEVTVETTSVFRADFLNELDAPAQAGTESAVSGVEGLPAGSALLVVKRGPNAG 60
Query 68 SRFLLDQAITSAGRHPDSDIFLDDVTVSRRHAEFRLENNEFNVVDVGSLNGTYVNREPVD 127
SRFLLDQ TSAGRHPDSDIFLDDVTVSRRHAEFRLENNEF+VVDVGSLNGTYVNREPVD
Sbjct 61 SRFLLDQPTTSAGRHPDSDIFLDDVTVSRRHAEFRLENNEFSVVDVGSLNGTYVNREPVD 120
Query 128 SAVLANGDEVQIGKFRLVFLTGPKQGEDDGSTG 160
SAVLANGDEVQIGKFRLVFLTGPKQGED GS+G
Sbjct 121 SAVLANGDEVQIGKFRLVFLTGPKQGEDGGSSG 153
>gi|15828122|ref|NP_302385.1| hypothetical protein ML2076 [Mycobacterium leprae TN]
gi|221230599|ref|YP_002504015.1| hypothetical protein MLBr_02076 [Mycobacterium leprae Br4923]
gi|2578383|emb|CAA15468.1| hypothetical protein MLCB1788.36c [Mycobacterium leprae]
gi|13093676|emb|CAC31031.1| conserved hypothetical protein [Mycobacterium leprae]
gi|219933706|emb|CAR72173.1| conserved hypothetical protein [Mycobacterium leprae Br4923]
Length=162
Score = 276 bits (707), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 140/162 (87%), Positives = 147/162 (91%), Gaps = 0/162 (0%)
Query 1 VTDMNPDIEKDQTSDEVTVETTSVFRADFLSELDAPAQAGTESAVSGVEGLPPGSALLVV 60
+TDM+ ++DQTSDEVTVETTSVFRADFL+ELDAPAQAG ES VSGVEGL GSALLVV
Sbjct 1 MTDMDSGRQEDQTSDEVTVETTSVFRADFLNELDAPAQAGAESVVSGVEGLLAGSALLVV 60
Query 61 KRGPNAGSRFLLDQAITSAGRHPDSDIFLDDVTVSRRHAEFRLENNEFNVVDVGSLNGTY 120
KRGPNAGSRFLLDQAITSAGRHPDSDIFLDDVTVSRRHAEFRLE NEF+VVDVGSLNGTY
Sbjct 61 KRGPNAGSRFLLDQAITSAGRHPDSDIFLDDVTVSRRHAEFRLEGNEFHVVDVGSLNGTY 120
Query 121 VNREPVDSAVLANGDEVQIGKFRLVFLTGPKQGEDDGSTGGP 162
VNREPVDSAVLANGDEVQIGKFRLVFL G KQ +D G T G
Sbjct 121 VNREPVDSAVLANGDEVQIGKFRLVFLIGSKQDDDTGRTAGK 162
>gi|183982711|ref|YP_001851002.1| hypothetical protein MMAR_2704 [Mycobacterium marinum M]
gi|183176037|gb|ACC41147.1| conserved protein [Mycobacterium marinum M]
Length=162
Score = 275 bits (702), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 137/152 (91%), Positives = 145/152 (96%), Gaps = 0/152 (0%)
Query 1 VTDMNPDIEKDQTSDEVTVETTSVFRADFLSELDAPAQAGTESAVSGVEGLPPGSALLVV 60
+TDM+ ++DQTSDEVTVETTSVFRADFL+ELDAP Q+GTES+VSGVEGLP GSALLVV
Sbjct 1 MTDMDAARDRDQTSDEVTVETTSVFRADFLNELDAPTQSGTESSVSGVEGLPAGSALLVV 60
Query 61 KRGPNAGSRFLLDQAITSAGRHPDSDIFLDDVTVSRRHAEFRLENNEFNVVDVGSLNGTY 120
KRGPNAGSRFLLDQ ITSAGRHPDSDIFLDDVTVSRRHAEFRLE NEF+VVDVGSLNGTY
Sbjct 61 KRGPNAGSRFLLDQPITSAGRHPDSDIFLDDVTVSRRHAEFRLEGNEFSVVDVGSLNGTY 120
Query 121 VNREPVDSAVLANGDEVQIGKFRLVFLTGPKQ 152
VNREPVDSAVLANGDEVQIGKFRLVFLTGPKQ
Sbjct 121 VNREPVDSAVLANGDEVQIGKFRLVFLTGPKQ 152
>gi|118618435|ref|YP_906767.1| hypothetical protein MUL_3046 [Mycobacterium ulcerans Agy99]
gi|118570545|gb|ABL05296.1| conserved protein [Mycobacterium ulcerans Agy99]
Length=162
Score = 271 bits (693), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 136/152 (90%), Positives = 144/152 (95%), Gaps = 0/152 (0%)
Query 1 VTDMNPDIEKDQTSDEVTVETTSVFRADFLSELDAPAQAGTESAVSGVEGLPPGSALLVV 60
+TDM+ ++DQTSDEVTVETTSVFRADFL+ELDAP Q+GTES+VSGVEGLP GSALLVV
Sbjct 1 MTDMDAARDRDQTSDEVTVETTSVFRADFLNELDAPTQSGTESSVSGVEGLPAGSALLVV 60
Query 61 KRGPNAGSRFLLDQAITSAGRHPDSDIFLDDVTVSRRHAEFRLENNEFNVVDVGSLNGTY 120
KRGPNAGSRFLLDQ ITSAGRHPDSDIFLDDVTVSRRHAEFRLE NEF+VVDVGSLNGTY
Sbjct 61 KRGPNAGSRFLLDQPITSAGRHPDSDIFLDDVTVSRRHAEFRLEGNEFSVVDVGSLNGTY 120
Query 121 VNREPVDSAVLANGDEVQIGKFRLVFLTGPKQ 152
VNR PVDSAVLANGDEVQIGKFRLVFLTGPKQ
Sbjct 121 VNRGPVDSAVLANGDEVQIGKFRLVFLTGPKQ 152
>gi|333990562|ref|YP_004523176.1| hypothetical protein JDM601_1922 [Mycobacterium sp. JDM601]
gi|333486530|gb|AEF35922.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=168
Score = 264 bits (674), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 133/160 (84%), Positives = 140/160 (88%), Gaps = 0/160 (0%)
Query 1 VTDMNPDIEKDQTSDEVTVETTSVFRADFLSELDAPAQAGTESAVSGVEGLPPGSALLVV 60
VT+ +P +DQ DEVTVETTSVFRADFLSELDAPAQAG ES SGVEGLP GSALLVV
Sbjct 8 VTEKDPGNGQDQAGDEVTVETTSVFRADFLSELDAPAQAGGESLTSGVEGLPAGSALLVV 67
Query 61 KRGPNAGSRFLLDQAITSAGRHPDSDIFLDDVTVSRRHAEFRLENNEFNVVDVGSLNGTY 120
KRGPNAGSRFLLDQ +T+AGRHPDSDIFLDDVTVSRRHAEFRLE NEF VVDVGSLNGTY
Sbjct 68 KRGPNAGSRFLLDQPVTAAGRHPDSDIFLDDVTVSRRHAEFRLEGNEFQVVDVGSLNGTY 127
Query 121 VNREPVDSAVLANGDEVQIGKFRLVFLTGPKQGEDDGSTG 160
VNREPVDSAVL NGDEVQ+GKFRLVFLTGPK E + G
Sbjct 128 VNREPVDSAVLVNGDEVQVGKFRLVFLTGPKTAETEAGPG 167
>gi|251836811|pdb|2KKL|A Chain A, Solution Nmr Structure Of Fha Domain Of Mb1858 From
Mycobacterium Bovis. Northeast Structural Genomics Consortium
Target Mbr243c (24-155).
Length=140
Score = 260 bits (664), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 130/132 (99%), Positives = 130/132 (99%), Gaps = 0/132 (0%)
Query 24 VFRADFLSELDAPAQAGTESAVSGVEGLPPGSALLVVKRGPNAGSRFLLDQAITSAGRHP 83
VFRADFLSELDAPAQAGTESAVSGVEGLPPG ALLVVKRGPNAGSRFLLDQAITSAGRHP
Sbjct 1 VFRADFLSELDAPAQAGTESAVSGVEGLPPGLALLVVKRGPNAGSRFLLDQAITSAGRHP 60
Query 84 DSDIFLDDVTVSRRHAEFRLENNEFNVVDVGSLNGTYVNREPVDSAVLANGDEVQIGKFR 143
DSDIFLDDVTVSRRHAEFRLENNEFNVVDVGSLNGTYVNREPVDSAVLANGDEVQIGKFR
Sbjct 61 DSDIFLDDVTVSRRHAEFRLENNEFNVVDVGSLNGTYVNREPVDSAVLANGDEVQIGKFR 120
Query 144 LVFLTGPKQGED 155
LVFLTG KQGED
Sbjct 121 LVFLTGHKQGED 132
>gi|169629489|ref|YP_001703138.1| hypothetical protein MAB_2403 [Mycobacterium abscessus ATCC 19977]
gi|169241456|emb|CAM62484.1| Conserved hypothetical protein [Mycobacterium abscessus]
Length=157
Score = 257 bits (657), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 132/158 (84%), Positives = 140/158 (89%), Gaps = 2/158 (1%)
Query 4 MNPDIEKDQTSDEVTVETTSVFRADFLSELDAPAQAGTESAVSGVEGLPPGSALLVVKRG 63
M D +KD TS EVT ETTSVFRADF +EL+APAQAG + VSGVEGLP GSALLVVKRG
Sbjct 1 MVTDNDKDDTSGEVTAETTSVFRADFATELEAPAQAGAD--VSGVEGLPAGSALLVVKRG 58
Query 64 PNAGSRFLLDQAITSAGRHPDSDIFLDDVTVSRRHAEFRLENNEFNVVDVGSLNGTYVNR 123
PNAGSRFLLDQA TSAGRHPDSDIFLDDVTVSRRHAEFRL++ EF VVDVGSLNGTYVNR
Sbjct 59 PNAGSRFLLDQATTSAGRHPDSDIFLDDVTVSRRHAEFRLDSAEFQVVDVGSLNGTYVNR 118
Query 124 EPVDSAVLANGDEVQIGKFRLVFLTGPKQGEDDGSTGG 161
EPVDSAVLANGDEVQIGKFRLVFLTGPK DD ++GG
Sbjct 119 EPVDSAVLANGDEVQIGKFRLVFLTGPKSAGDDSASGG 156
>gi|289750400|ref|ZP_06509778.1| hypothetical protein cfp17 [Mycobacterium tuberculosis T92]
gi|289690987|gb|EFD58416.1| hypothetical protein cfp17 [Mycobacterium tuberculosis T92]
Length=155
Score = 257 bits (656), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 127/127 (100%), Positives = 127/127 (100%), Gaps = 0/127 (0%)
Query 36 PAQAGTESAVSGVEGLPPGSALLVVKRGPNAGSRFLLDQAITSAGRHPDSDIFLDDVTVS 95
PAQAGTESAVSGVEGLPPGSALLVVKRGPNAGSRFLLDQAITSAGRHPDSDIFLDDVTVS
Sbjct 29 PAQAGTESAVSGVEGLPPGSALLVVKRGPNAGSRFLLDQAITSAGRHPDSDIFLDDVTVS 88
Query 96 RRHAEFRLENNEFNVVDVGSLNGTYVNREPVDSAVLANGDEVQIGKFRLVFLTGPKQGED 155
RRHAEFRLENNEFNVVDVGSLNGTYVNREPVDSAVLANGDEVQIGKFRLVFLTGPKQGED
Sbjct 89 RRHAEFRLENNEFNVVDVGSLNGTYVNREPVDSAVLANGDEVQIGKFRLVFLTGPKQGED 148
Query 156 DGSTGGP 162
DGSTGGP
Sbjct 149 DGSTGGP 155
>gi|6409242|gb|AAF07901.1|AF173844_2 putative signal transduction protein GarA [Mycobacterium smegmatis
str. MC2 155]
Length=158
Score = 256 bits (654), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 134/158 (85%), Positives = 141/158 (90%), Gaps = 2/158 (1%)
Query 1 VTDMNPDIEKDQTSDEVTVETTSVFRADFLSELDAPAQAGTESAVSGVEGLPPGSALLVV 60
+TD + ++ DQ+ D VTVETTSVFRADFL+ELDAPA AGTE AVSGVEGLP GSALLVV
Sbjct 1 MTDKDSNLGADQSED-VTVETTSVFRADFLNELDAPAAAGTEGAVSGVEGLPSGSALLVV 59
Query 61 KRGPNAGSRFLLDQAITSAGRHPDSDIFLDDVTVSRRHAEFRLENNEFNVVDVGSLNGTY 120
KRGPNAGSRFLLDQ TSAGRHPDSDIFLDDVTVSRRHAEFRLE EF VVDVGSLNGTY
Sbjct 60 KRGPNAGSRFLLDQPTTSAGRHPDSDIFLDDVTVSRRHAEFRLEGGEFQVVDVGSLNGTY 119
Query 121 VNREPVDSAVLANGDEVQIGKFRLVFLTGPKQGEDDGS 158
VNREPVDSAVLANGDEVQIGKFRLVFLTGPK +D GS
Sbjct 120 VNREPVDSAVLANGDEVQIGKFRLVFLTGPKS-DDSGS 156
>gi|145223988|ref|YP_001134666.1| FHA domain-containing protein [Mycobacterium gilvum PYR-GCK]
gi|145216474|gb|ABP45878.1| FHA domain containing protein [Mycobacterium gilvum PYR-GCK]
Length=183
Score = 253 bits (647), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 131/147 (90%), Positives = 135/147 (92%), Gaps = 2/147 (1%)
Query 14 SDEVTVETTSVFRADFLSELDAPAQAGTESAVSGVEGLPPGSALLVVKRGPNAGSRFLLD 73
SDEVTVETTSVFRADFL+ELDAP AG +SAVSGVEGLP GSALLVVKRGPNAGSRFLLD
Sbjct 39 SDEVTVETTSVFRADFLNELDAPPAAGGDSAVSGVEGLPAGSALLVVKRGPNAGSRFLLD 98
Query 74 QAITSAGRHPDSDIFLDDVTVSRRHAEFRLENNEFNVVDVGSLNGTYVNREPVDSAVLAN 133
Q TSAGRHPDSDIFLDDVTVSRRHAEFRLE+ EF VVDVGSLNGTYVNREPVDSAVLAN
Sbjct 99 QPTTSAGRHPDSDIFLDDVTVSRRHAEFRLESGEFQVVDVGSLNGTYVNREPVDSAVLAN 158
Query 134 GDEVQIGKFRLVFLTGPKQGEDDGSTG 160
GDEVQIGKFRLVFLTGPK DDG+ G
Sbjct 159 GDEVQIGKFRLVFLTGPKG--DDGANG 183
>gi|108799810|ref|YP_640007.1| FHA domain-containing protein [Mycobacterium sp. MCS]
gi|119868920|ref|YP_938872.1| FHA domain-containing protein [Mycobacterium sp. KMS]
gi|126435454|ref|YP_001071145.1| FHA domain-containing protein [Mycobacterium sp. JLS]
gi|108770229|gb|ABG08951.1| FHA domain containing protein [Mycobacterium sp. MCS]
gi|119695009|gb|ABL92082.1| FHA domain containing protein [Mycobacterium sp. KMS]
gi|126235254|gb|ABN98654.1| FHA domain containing protein [Mycobacterium sp. JLS]
Length=158
Score = 252 bits (644), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 127/140 (91%), Positives = 133/140 (95%), Gaps = 0/140 (0%)
Query 11 DQTSDEVTVETTSVFRADFLSELDAPAQAGTESAVSGVEGLPPGSALLVVKRGPNAGSRF 70
DQTS+EVTVETTSVFRADFL+ELDAP AG++SAVSGVEGLP GSALLVVKRGPNAGSRF
Sbjct 11 DQTSEEVTVETTSVFRADFLNELDAPPAAGSDSAVSGVEGLPVGSALLVVKRGPNAGSRF 70
Query 71 LLDQAITSAGRHPDSDIFLDDVTVSRRHAEFRLENNEFNVVDVGSLNGTYVNREPVDSAV 130
LLDQ TSAGRHPDSDIFLDDVTVSRRHAEFRLE+ EF VVDVGSLNGTYVNREPVDSAV
Sbjct 71 LLDQPTTSAGRHPDSDIFLDDVTVSRRHAEFRLESGEFQVVDVGSLNGTYVNREPVDSAV 130
Query 131 LANGDEVQIGKFRLVFLTGP 150
L+NGDEVQIGKFRLVFLTGP
Sbjct 131 LSNGDEVQIGKFRLVFLTGP 150
>gi|120404114|ref|YP_953943.1| FHA domain-containing protein [Mycobacterium vanbaalenii PYR-1]
gi|119956932|gb|ABM13937.1| FHA domain containing protein [Mycobacterium vanbaalenii PYR-1]
Length=157
Score = 252 bits (644), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 132/153 (87%), Positives = 136/153 (89%), Gaps = 1/153 (0%)
Query 7 DIEKDQTSDEVTVETTSVFRADFLSELDAPAQAGTESAVSGVEGLPPGSALLVVKRGPNA 66
D SDEVTVETTSVFRADFL+ELDAP AG ESAVSGVEGLP GSALLVVKRGPNA
Sbjct 5 DFNSGTDSDEVTVETTSVFRADFLNELDAPPAAGGESAVSGVEGLPVGSALLVVKRGPNA 64
Query 67 GSRFLLDQAITSAGRHPDSDIFLDDVTVSRRHAEFRLENNEFNVVDVGSLNGTYVNREPV 126
GSRFLLDQ TSAGRHPDSDIFLDDVTVSRRHAEFRLE+ EF VVDVGSLNGTYVNREPV
Sbjct 65 GSRFLLDQPTTSAGRHPDSDIFLDDVTVSRRHAEFRLESGEFQVVDVGSLNGTYVNREPV 124
Query 127 DSAVLANGDEVQIGKFRLVFLTGPKQGEDDGST 159
DSAVLANGDEVQIGKFRLVFLTGPK G D G++
Sbjct 125 DSAVLANGDEVQIGKFRLVFLTGPK-GADGGAS 156
>gi|315444320|ref|YP_004077199.1| FHA domain-containing protein [Mycobacterium sp. Spyr1]
gi|315262623|gb|ADT99364.1| FHA domain-containing protein [Mycobacterium sp. Spyr1]
Length=156
Score = 252 bits (644), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 131/147 (90%), Positives = 135/147 (92%), Gaps = 2/147 (1%)
Query 14 SDEVTVETTSVFRADFLSELDAPAQAGTESAVSGVEGLPPGSALLVVKRGPNAGSRFLLD 73
SDEVTVETTSVFRADFL+ELDAP AG +SAVSGVEGLP GSALLVVKRGPNAGSRFLLD
Sbjct 12 SDEVTVETTSVFRADFLNELDAPPAAGGDSAVSGVEGLPAGSALLVVKRGPNAGSRFLLD 71
Query 74 QAITSAGRHPDSDIFLDDVTVSRRHAEFRLENNEFNVVDVGSLNGTYVNREPVDSAVLAN 133
Q TSAGRHPDSDIFLDDVTVSRRHAEFRLE+ EF VVDVGSLNGTYVNREPVDSAVLAN
Sbjct 72 QPTTSAGRHPDSDIFLDDVTVSRRHAEFRLESGEFQVVDVGSLNGTYVNREPVDSAVLAN 131
Query 134 GDEVQIGKFRLVFLTGPKQGEDDGSTG 160
GDEVQIGKFRLVFLTGPK DDG+ G
Sbjct 132 GDEVQIGKFRLVFLTGPKG--DDGANG 156
>gi|118471814|ref|YP_887950.1| forkhead-associated protein [Mycobacterium smegmatis str. MC2
155]
gi|118173101|gb|ABK73997.1| forkhead-associated protein [Mycobacterium smegmatis str. MC2
155]
Length=143
Score = 249 bits (635), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 128/142 (91%), Positives = 131/142 (93%), Gaps = 1/142 (0%)
Query 17 VTVETTSVFRADFLSELDAPAQAGTESAVSGVEGLPPGSALLVVKRGPNAGSRFLLDQAI 76
+TVETTSVFRADFL+ELDAPA AGTE AVSGVEGLP GSALLVVKRGPNAGSRFLLDQ
Sbjct 1 MTVETTSVFRADFLNELDAPAAAGTEGAVSGVEGLPSGSALLVVKRGPNAGSRFLLDQPT 60
Query 77 TSAGRHPDSDIFLDDVTVSRRHAEFRLENNEFNVVDVGSLNGTYVNREPVDSAVLANGDE 136
TSAGRHPDSDIFLDDVTVSRRHAEFRLE EF VVDVGSLNGTYVNREPVDSAVLANGDE
Sbjct 61 TSAGRHPDSDIFLDDVTVSRRHAEFRLEGGEFQVVDVGSLNGTYVNREPVDSAVLANGDE 120
Query 137 VQIGKFRLVFLTGPKQGEDDGS 158
VQIGKFRLVFLTGPK +D GS
Sbjct 121 VQIGKFRLVFLTGPKS-DDSGS 141
>gi|312139833|ref|YP_004007169.1| transcriptional regulator [Rhodococcus equi 103S]
gi|325674355|ref|ZP_08154044.1| FHA-domain-containing protein [Rhodococcus equi ATCC 33707]
gi|311889172|emb|CBH48486.1| putative transcriptional regulator [Rhodococcus equi 103S]
gi|325555035|gb|EGD24708.1| FHA-domain-containing protein [Rhodococcus equi ATCC 33707]
Length=164
Score = 232 bits (591), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 119/153 (78%), Positives = 128/153 (84%), Gaps = 5/153 (3%)
Query 10 KDQTSDEVTVETTSVFRADFLSELDAPAQAGTESAVSGVEGLPPGSALLVVKRGPNAGSR 69
D E ETTSVFRADFLSE+D + E+ VSGVEGLP GSALLVVKRGPNAGSR
Sbjct 6 NDAVYGETPAETTSVFRADFLSEMDTQSSQTAEAPVSGVEGLPAGSALLVVKRGPNAGSR 65
Query 70 FLLDQAITSAGRHPDSDIFLDDVTVSRRHAEFRLENNEFNVVDVGSLNGTYVNREPVDSA 129
FLLDQ TSAGRHPDSDIFLDDVTVSRRHAEFR +++EF VVDVGSLNGTYVNREPVDSA
Sbjct 66 FLLDQPTTSAGRHPDSDIFLDDVTVSRRHAEFRQDDDEFQVVDVGSLNGTYVNREPVDSA 125
Query 130 VLANGDEVQIGKFRLVFLTGPKQGEDDGSTGGP 162
VLANGDEVQIGKFRLVFLTGP+ G++GGP
Sbjct 126 VLANGDEVQIGKFRLVFLTGPR-----GNSGGP 153
>gi|333920803|ref|YP_004494384.1| putative signal transduction protein GarA [Amycolicicoccus subflavus
DQS3-9A1]
gi|333483024|gb|AEF41584.1| Putative signal transduction protein GarA [Amycolicicoccus subflavus
DQS3-9A1]
Length=160
Score = 227 bits (579), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 118/144 (82%), Positives = 125/144 (87%), Gaps = 2/144 (1%)
Query 18 TVETTSVFRADFLSELDAPAQAGTESAVSGVEGLPPGSALLVVKRGPNAGSRFLLDQAIT 77
+ ETTSVFRADFL ELDA +QA E VSG+E LP GSALLVVKRGPNAGSRFLLD+A T
Sbjct 14 SAETTSVFRADFLRELDAASQA-PEPQVSGIESLPAGSALLVVKRGPNAGSRFLLDEATT 72
Query 78 SAGRHPDSDIFLDDVTVSRRHAEFRLENNEFNVVDVGSLNGTYVNREPVDSAVLANGDEV 137
SAGRHPDSDIFLDDVTVSRRHAEFR EN F VVDVGSLNGTYVNREPVDSAVLANGDEV
Sbjct 73 SAGRHPDSDIFLDDVTVSRRHAEFRRENGVFQVVDVGSLNGTYVNREPVDSAVLANGDEV 132
Query 138 QIGKFRLVFLTGPKQ-GEDDGSTG 160
QIGKFRLVFL GPK G+D+ + G
Sbjct 133 QIGKFRLVFLAGPKSVGQDEHAAG 156
>gi|111017924|ref|YP_700896.1| hypothetical protein RHA1_ro00906 [Rhodococcus jostii RHA1]
gi|226360055|ref|YP_002777833.1| signal transduction protein GarA [Rhodococcus opacus B4]
gi|110817454|gb|ABG92738.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
gi|226238540|dbj|BAH48888.1| putative signal transduction protein GarA [Rhodococcus opacus
B4]
Length=166
Score = 227 bits (579), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 117/143 (82%), Positives = 123/143 (87%), Gaps = 1/143 (0%)
Query 10 KDQTSDEVTVETTSVFRADFLSELD-APAQAGTESAVSGVEGLPPGSALLVVKRGPNAGS 68
D E ETTSVFRADFL+ELD + A E+ VSGVEGLP GSALLVVKRGPNAGS
Sbjct 6 NDAVYGETPAETTSVFRADFLNELDNSSATQAPEAPVSGVEGLPAGSALLVVKRGPNAGS 65
Query 69 RFLLDQAITSAGRHPDSDIFLDDVTVSRRHAEFRLENNEFNVVDVGSLNGTYVNREPVDS 128
RFLLDQ TSAGRHPDSDIFLDDVTVSRRHAEFR E++EF VVDVGSLNGTYVNREPVDS
Sbjct 66 RFLLDQPTTSAGRHPDSDIFLDDVTVSRRHAEFRQEDDEFQVVDVGSLNGTYVNREPVDS 125
Query 129 AVLANGDEVQIGKFRLVFLTGPK 151
AVLANGDEVQIGKFRLVFLTGP+
Sbjct 126 AVLANGDEVQIGKFRLVFLTGPR 148
>gi|23821219|emb|CAD52977.1| hypothetical protein [Rhodococcus fascians D188]
Length=165
Score = 226 bits (575), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 117/146 (81%), Positives = 124/146 (85%), Gaps = 1/146 (0%)
Query 9 EKDQTSDEVTVETTSVFRADFLSELDAPAQA-GTESAVSGVEGLPPGSALLVVKRGPNAG 67
+ D E ETTSVFRADFL ELD A A TE+ VSGVEGLP G+ALLVVKRGPNAG
Sbjct 5 DNDSNYGESPAETTSVFRADFLQELDNSATAQSTEAPVSGVEGLPVGAALLVVKRGPNAG 64
Query 68 SRFLLDQAITSAGRHPDSDIFLDDVTVSRRHAEFRLENNEFNVVDVGSLNGTYVNREPVD 127
SRFLLDQ TSAGRHPDSDIFLDDVTVSRRHAEFR + ++F VVDVGSLNGTYVNREPVD
Sbjct 65 SRFLLDQPTTSAGRHPDSDIFLDDVTVSRRHAEFRQDEDDFQVVDVGSLNGTYVNREPVD 124
Query 128 SAVLANGDEVQIGKFRLVFLTGPKQG 153
SAVLANGDEVQIGKFRLVFLTGP+ G
Sbjct 125 SAVLANGDEVQIGKFRLVFLTGPRGG 150
>gi|229494859|ref|ZP_04388612.1| FHA domain containing protein [Rhodococcus erythropolis SK121]
gi|229318217|gb|EEN84085.1| FHA domain containing protein [Rhodococcus erythropolis SK121]
Length=164
Score = 224 bits (570), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 115/140 (83%), Positives = 122/140 (88%), Gaps = 2/140 (1%)
Query 16 EVTVETTSVFRADFLSELD--APAQAGTESAVSGVEGLPPGSALLVVKRGPNAGSRFLLD 73
E ETTSVFRADFL+ELD + A E VSGVEGLP G+ALLVVKRGPNAGSRFLLD
Sbjct 12 ESPAETTSVFRADFLNELDNTSSAAPAAEQPVSGVEGLPAGAALLVVKRGPNAGSRFLLD 71
Query 74 QAITSAGRHPDSDIFLDDVTVSRRHAEFRLENNEFNVVDVGSLNGTYVNREPVDSAVLAN 133
Q TSAGRHPDSDIFLDDVTVSRRHAEFR E+ +F+VVDVGSLNGTYVNREPVDSAVLAN
Sbjct 72 QPTTSAGRHPDSDIFLDDVTVSRRHAEFRQEDADFHVVDVGSLNGTYVNREPVDSAVLAN 131
Query 134 GDEVQIGKFRLVFLTGPKQG 153
GDEVQIGKFRLVFLTGP+ G
Sbjct 132 GDEVQIGKFRLVFLTGPRAG 151
>gi|226306711|ref|YP_002766671.1| signal transduction protein GarA [Rhodococcus erythropolis PR4]
gi|226185828|dbj|BAH33932.1| putative signal transduction protein GarA [Rhodococcus erythropolis
PR4]
Length=175
Score = 224 bits (570), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 116/146 (80%), Positives = 123/146 (85%), Gaps = 2/146 (1%)
Query 10 KDQTSDEVTVETTSVFRADFLSELD--APAQAGTESAVSGVEGLPPGSALLVVKRGPNAG 67
D E ETTSVFRADFL+ELD + A E VSGVEGLP G+ALLVVKRGPNAG
Sbjct 17 NDAGYGESPAETTSVFRADFLNELDNTSSAAPAAEQPVSGVEGLPAGAALLVVKRGPNAG 76
Query 68 SRFLLDQAITSAGRHPDSDIFLDDVTVSRRHAEFRLENNEFNVVDVGSLNGTYVNREPVD 127
SRFLLDQ TSAGRHPDSDIFLDDVTVSRRHAEFR E+ +F+VVDVGSLNGTYVNREPVD
Sbjct 77 SRFLLDQPTTSAGRHPDSDIFLDDVTVSRRHAEFRQEDADFHVVDVGSLNGTYVNREPVD 136
Query 128 SAVLANGDEVQIGKFRLVFLTGPKQG 153
SAVLANGDEVQIGKFRLVFLTGP+ G
Sbjct 137 SAVLANGDEVQIGKFRLVFLTGPRAG 162
>gi|262202678|ref|YP_003273886.1| Forkhead-associated protein [Gordonia bronchialis DSM 43247]
gi|262086025|gb|ACY21993.1| Forkhead-associated protein [Gordonia bronchialis DSM 43247]
Length=149
Score = 222 bits (565), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 110/136 (81%), Positives = 121/136 (89%), Gaps = 0/136 (0%)
Query 16 EVTVETTSVFRADFLSELDAPAQAGTESAVSGVEGLPPGSALLVVKRGPNAGSRFLLDQA 75
E VETTSVFR +F++ELDA AQ +E A +GVE L PG+ALLVVKRGPNAGSRFLLDQ
Sbjct 9 EAPVETTSVFREEFINELDANAQTSSEPADTGVERLSPGTALLVVKRGPNAGSRFLLDQP 68
Query 76 ITSAGRHPDSDIFLDDVTVSRRHAEFRLENNEFNVVDVGSLNGTYVNREPVDSAVLANGD 135
TSAGRHPDSDIFLDDVTVSRRHAEFRL +NEF VVDVGSLNGTYVNREPVD+A L+NGD
Sbjct 69 TTSAGRHPDSDIFLDDVTVSRRHAEFRLGDNEFQVVDVGSLNGTYVNREPVDTAALSNGD 128
Query 136 EVQIGKFRLVFLTGPK 151
EVQIGKFRLVFL+GP+
Sbjct 129 EVQIGKFRLVFLSGPR 144
>gi|343928464|ref|ZP_08767912.1| signal transduction protein GarA [Gordonia alkanivorans NBRC
16433]
gi|343761649|dbj|GAA14838.1| signal transduction protein GarA [Gordonia alkanivorans NBRC
16433]
Length=150
Score = 217 bits (553), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 109/140 (78%), Positives = 120/140 (86%), Gaps = 0/140 (0%)
Query 16 EVTVETTSVFRADFLSELDAPAQAGTESAVSGVEGLPPGSALLVVKRGPNAGSRFLLDQA 75
E VETTSVFR +F++ELDA +E A +GVE L PG+ALLVVKRGPNAGSRFLLDQ
Sbjct 10 EAPVETTSVFREEFINELDAGTSTSSEPAETGVERLAPGTALLVVKRGPNAGSRFLLDQP 69
Query 76 ITSAGRHPDSDIFLDDVTVSRRHAEFRLENNEFNVVDVGSLNGTYVNREPVDSAVLANGD 135
TSAGRHPDSDIFLDDVTVSRRHAEFRL +NEF VVDVGSLNGTYVNREPVD+A L+NGD
Sbjct 70 TTSAGRHPDSDIFLDDVTVSRRHAEFRLGDNEFQVVDVGSLNGTYVNREPVDTASLSNGD 129
Query 136 EVQIGKFRLVFLTGPKQGED 155
EVQIGKFRLVFL+GP+ D
Sbjct 130 EVQIGKFRLVFLSGPRDEAD 149
>gi|54024455|ref|YP_118697.1| hypothetical protein nfa24860 [Nocardia farcinica IFM 10152]
gi|54015963|dbj|BAD57333.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length=161
Score = 215 bits (547), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 114/154 (75%), Positives = 124/154 (81%), Gaps = 4/154 (2%)
Query 10 KDQTSDEVTVETTSVFRADFLSELDAP---AQAGTESAVSGVEGLPPGSALLVVKRGPNA 66
KD E ETTSVFRADFL+E+DA Q G E V GVEGLP G+ALLVVKRGPNA
Sbjct 5 KDPGYQETAAETTSVFRADFLNEVDASRSGEQTG-EQPVQGVEGLPAGAALLVVKRGPNA 63
Query 67 GSRFLLDQAITSAGRHPDSDIFLDDVTVSRRHAEFRLENNEFNVVDVGSLNGTYVNREPV 126
GSRFLLDQ TSAGRHPDSDIFLDDVTVSRRHAEFR +++ F VVDVGSLNGTYVNREPV
Sbjct 64 GSRFLLDQPTTSAGRHPDSDIFLDDVTVSRRHAEFRQDDDTFQVVDVGSLNGTYVNREPV 123
Query 127 DSAVLANGDEVQIGKFRLVFLTGPKQGEDDGSTG 160
DS+ L NGDEVQIGKFRLVFLTGP+ ++ S G
Sbjct 124 DSSELQNGDEVQIGKFRLVFLTGPRAQVNEPSAG 157
>gi|296394669|ref|YP_003659553.1| FHA domain-containing protein [Segniliparus rotundus DSM 44985]
gi|296181816|gb|ADG98722.1| FHA domain containing protein [Segniliparus rotundus DSM 44985]
Length=159
Score = 214 bits (546), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 106/134 (80%), Positives = 119/134 (89%), Gaps = 0/134 (0%)
Query 16 EVTVETTSVFRADFLSELDAPAQAGTESAVSGVEGLPPGSALLVVKRGPNAGSRFLLDQA 75
EV VETTS+FR+D + E++ A TE+A+ GVEGLP G+ALLVVKRGPNAGSRFLLDQ+
Sbjct 25 EVPVETTSLFRSDLIGEVEPGATPSTETAIPGVEGLPAGAALLVVKRGPNAGSRFLLDQS 84
Query 76 ITSAGRHPDSDIFLDDVTVSRRHAEFRLENNEFNVVDVGSLNGTYVNREPVDSAVLANGD 135
TSAGRHPDSDIFLDDVTVSRRHAEFR N F+VVDVGSLNGTYVNREPVDSA+L+NGD
Sbjct 85 TTSAGRHPDSDIFLDDVTVSRRHAEFRRAENGFSVVDVGSLNGTYVNREPVDSALLSNGD 144
Query 136 EVQIGKFRLVFLTG 149
EVQIGKFRLVF+TG
Sbjct 145 EVQIGKFRLVFVTG 158
>gi|213965994|ref|ZP_03394184.1| oxoglutarate dehydrogenase inhibitor [Corynebacterium amycolatum
SK46]
gi|213951408|gb|EEB62800.1| oxoglutarate dehydrogenase inhibitor [Corynebacterium amycolatum
SK46]
Length=141
Score = 214 bits (544), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 106/134 (80%), Positives = 118/134 (89%), Gaps = 2/134 (1%)
Query 16 EVTVETTSVFRADFLSELDAPAQAGTESAVSGVEGLPPGSALLVVKRGPNAGSRFLLDQA 75
E +VETTSVFRAD L E+++ + T+S VSGVEGLP GSALLVVKRGPNAGSRFLLDQA
Sbjct 9 EASVETTSVFRADLLKEMESSSN--TDSTVSGVEGLPAGSALLVVKRGPNAGSRFLLDQA 66
Query 76 ITSAGRHPDSDIFLDDVTVSRRHAEFRLENNEFNVVDVGSLNGTYVNREPVDSAVLANGD 135
+T+AGRHPDSDIFLDDVTVSRRHAEFR + + VVDVGSLNGTYVNREP +SAVLANGD
Sbjct 67 VTTAGRHPDSDIFLDDVTVSRRHAEFRKNGDSYEVVDVGSLNGTYVNREPKNSAVLANGD 126
Query 136 EVQIGKFRLVFLTG 149
EVQ+GKFRLVFL G
Sbjct 127 EVQVGKFRLVFLIG 140
>gi|319949170|ref|ZP_08023259.1| forkhead-associated protein [Dietzia cinnamea P4]
gi|319437156|gb|EFV92187.1| forkhead-associated protein [Dietzia cinnamea P4]
Length=145
Score = 214 bits (544), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 109/134 (82%), Positives = 117/134 (88%), Gaps = 1/134 (0%)
Query 16 EVTVETTSVFRADFLSELDAPAQAGTESAVSGVEGLPPGSALLVVKRGPNAGSRFLLDQA 75
E T ETTSVFRA+ L+E D + A ++SAV+GVEGLP G ALLVVKRGPNAGSRFLLDQ+
Sbjct 9 EATAETTSVFRAELLNESDQQS-AQSDSAVTGVEGLPEGQALLVVKRGPNAGSRFLLDQS 67
Query 76 ITSAGRHPDSDIFLDDVTVSRRHAEFRLENNEFNVVDVGSLNGTYVNREPVDSAVLANGD 135
TSAGRHPDSDIFLDDVTVSRRHAEFR E F VVDVGSLNGTYVNREPVDSA L+NGD
Sbjct 68 TTSAGRHPDSDIFLDDVTVSRRHAEFRSEGETFTVVDVGSLNGTYVNREPVDSASLSNGD 127
Query 136 EVQIGKFRLVFLTG 149
EVQIGKFRLVFLTG
Sbjct 128 EVQIGKFRLVFLTG 141
>gi|324997671|ref|ZP_08118783.1| FHA domain containing protein [Pseudonocardia sp. P1]
Length=149
Score = 211 bits (538), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 108/133 (82%), Positives = 119/133 (90%), Gaps = 3/133 (2%)
Query 20 ETTSVFRADFLSELDAPAQAGTESAVSGVEGLPPGSALLVVKRGPNAGSRFLLDQAITSA 79
ETTSVFRADFL++++ P+ E AVSGV+GLP GSALLVV+RGPNAGSRFLLD TSA
Sbjct 16 ETTSVFRADFLADVEQPS---AEPAVSGVDGLPAGSALLVVRRGPNAGSRFLLDVPTTSA 72
Query 80 GRHPDSDIFLDDVTVSRRHAEFRLENNEFNVVDVGSLNGTYVNREPVDSAVLANGDEVQI 139
GRHPDSDIFLDDVTVSRRHAEFR + EF VVDVGSLNGTYVNREPVD+AVLANGDEVQI
Sbjct 73 GRHPDSDIFLDDVTVSRRHAEFRRDAGEFVVVDVGSLNGTYVNREPVDTAVLANGDEVQI 132
Query 140 GKFRLVFLTGPKQ 152
GKFRLVFLTGP++
Sbjct 133 GKFRLVFLTGPRE 145
>gi|326384965|ref|ZP_08206639.1| Forkhead-associated protein [Gordonia neofelifaecis NRRL B-59395]
gi|326196355|gb|EGD53555.1| Forkhead-associated protein [Gordonia neofelifaecis NRRL B-59395]
Length=141
Score = 211 bits (538), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 106/136 (78%), Positives = 118/136 (87%), Gaps = 1/136 (0%)
Query 19 VETTSVFRADFLSELDAPAQAGTESAVSGVEGLPPGSALLVVKRGPNAGSRFLLDQAITS 78
+ETTSVFR DF+ E+DAPA + E A +GVE L PG+ALLVVKRGPNAGSRFLLDQ TS
Sbjct 1 METTSVFREDFIKEVDAPATS-NEPADTGVERLSPGTALLVVKRGPNAGSRFLLDQPTTS 59
Query 79 AGRHPDSDIFLDDVTVSRRHAEFRLENNEFNVVDVGSLNGTYVNREPVDSAVLANGDEVQ 138
AGRHPDSDIFLDDVTVSRRHAEFR ++F VVDVGSLNGTYVNREPVD+A L +GDEVQ
Sbjct 60 AGRHPDSDIFLDDVTVSRRHAEFRRNGDDFQVVDVGSLNGTYVNREPVDTATLTSGDEVQ 119
Query 139 IGKFRLVFLTGPKQGE 154
IGKFRLVFL+GP+ GE
Sbjct 120 IGKFRLVFLSGPRAGE 135
>gi|317506031|ref|ZP_07963861.1| FHA domain-containing protein [Segniliparus rugosus ATCC BAA-974]
gi|316255689|gb|EFV14929.1| FHA domain-containing protein [Segniliparus rugosus ATCC BAA-974]
Length=155
Score = 210 bits (535), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 109/150 (73%), Positives = 125/150 (84%), Gaps = 4/150 (2%)
Query 1 VTDMNPDIEKDQTSDEVTVETTSVFRADFLSELDAPAQA-GTESAVSGVEGLPPGSALLV 59
VTD N +Q + E VETTS+FR+D + E+++ A +E+A+ GVEGLP G+ALLV
Sbjct 8 VTDYN---RPEQGAPEAPVETTSLFRSDLIGEIESGATTPSSETAIPGVEGLPAGAALLV 64
Query 60 VKRGPNAGSRFLLDQAITSAGRHPDSDIFLDDVTVSRRHAEFRLENNEFNVVDVGSLNGT 119
VKRGPNAGSRFLLDQ TSAGRHPDSDIFLDDVTVSRRHAEFR N F+VVDVGSLNGT
Sbjct 65 VKRGPNAGSRFLLDQDTTSAGRHPDSDIFLDDVTVSRRHAEFRRAENGFSVVDVGSLNGT 124
Query 120 YVNREPVDSAVLANGDEVQIGKFRLVFLTG 149
YVNREPVDSA+L+NGDEVQIGKFRLVF+TG
Sbjct 125 YVNREPVDSALLSNGDEVQIGKFRLVFVTG 154
>gi|256379361|ref|YP_003103021.1| FHA domain containing protein [Actinosynnema mirum DSM 43827]
gi|255923664|gb|ACU39175.1| FHA domain containing protein [Actinosynnema mirum DSM 43827]
Length=150
Score = 210 bits (535), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 111/139 (80%), Positives = 120/139 (87%), Gaps = 4/139 (2%)
Query 16 EVTVETTSVFRADFLSELD-APAQAGTESAVSGVEGLPPGSALLVVKRGPNAGSRFLLDQ 74
E + E TSVFRADFL+E++ APA +E AV+GV+ LP GSALLVVKRGPNAGSRFLLD+
Sbjct 12 EQSPERTSVFRADFLAEVEGAPA---SEPAVAGVDALPAGSALLVVKRGPNAGSRFLLDR 68
Query 75 AITSAGRHPDSDIFLDDVTVSRRHAEFRLENNEFNVVDVGSLNGTYVNREPVDSAVLANG 134
TSAGRHPDSDIFLDDVTVSRRHAEFR E EF V+DVGSLNGTYVNREPVD AVLANG
Sbjct 69 DTTSAGRHPDSDIFLDDVTVSRRHAEFRREGGEFVVIDVGSLNGTYVNREPVDQAVLANG 128
Query 135 DEVQIGKFRLVFLTGPKQG 153
DEVQIGKFRLVFLTGP G
Sbjct 129 DEVQIGKFRLVFLTGPGAG 147
>gi|172040753|ref|YP_001800467.1| inhibitor of ODH activity [Corynebacterium urealyticum DSM 7109]
gi|171852057|emb|CAQ05033.1| inhibitor of ODH activity [Corynebacterium urealyticum DSM 7109]
Length=144
Score = 209 bits (532), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 104/137 (76%), Positives = 119/137 (87%), Gaps = 2/137 (1%)
Query 16 EVTVETTSVFRADFLSELDAPAQAGTESAVSGVEGLPPGSALLVVKRGPNAGSRFLLDQA 75
E +VETTSVFRAD L E+++ AQA +++ SGVEGLP GSALLVVKRGPNAGSRFLLDQ
Sbjct 9 EASVETTSVFRADLLKEMESGAQA--DASPSGVEGLPEGSALLVVKRGPNAGSRFLLDQE 66
Query 76 ITSAGRHPDSDIFLDDVTVSRRHAEFRLENNEFNVVDVGSLNGTYVNREPVDSAVLANGD 135
T+AGRHPDSDIFLDDVTVSRRHAEFR ++ VVDVGSLNGTYVNREP ++AVL+NGD
Sbjct 67 ATAAGRHPDSDIFLDDVTVSRRHAEFRRNGADYEVVDVGSLNGTYVNREPKNAAVLSNGD 126
Query 136 EVQIGKFRLVFLTGPKQ 152
E+QIGKFRLVFL G K+
Sbjct 127 EIQIGKFRLVFLNGAKE 143
>gi|334564212|ref|ZP_08517203.1| hypothetical protein CbovD2_06516 [Corynebacterium bovis DSM
20582]
Length=144
Score = 209 bits (532), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 105/137 (77%), Positives = 117/137 (86%), Gaps = 2/137 (1%)
Query 16 EVTVETTSVFRADFLSELDAPAQAGTESAVSGVEGLPPGSALLVVKRGPNAGSRFLLDQA 75
E +VETTSVFRAD L ++++ AQ T+S SGVE LP GSALLVVKRGPNAGSRFLLDQ
Sbjct 9 EASVETTSVFRADLLKDMESGAQ--TDSTPSGVEALPSGSALLVVKRGPNAGSRFLLDQD 66
Query 76 ITSAGRHPDSDIFLDDVTVSRRHAEFRLENNEFNVVDVGSLNGTYVNREPVDSAVLANGD 135
T+AGRHPDSDIFLDDVTVSRRHAEFR E+ VVDVGSLNGTYVNREP +SAVL+NGD
Sbjct 67 TTAAGRHPDSDIFLDDVTVSRRHAEFRRNGEEYEVVDVGSLNGTYVNREPKNSAVLSNGD 126
Query 136 EVQIGKFRLVFLTGPKQ 152
E+QIGKFRLVFL G K+
Sbjct 127 EIQIGKFRLVFLNGSKE 143
>gi|340794265|ref|YP_004759728.1| inhibitor of ODH activity [Corynebacterium variabile DSM 44702]
gi|340534175|gb|AEK36655.1| inhibitor of ODH activity [Corynebacterium variabile DSM 44702]
Length=144
Score = 209 bits (531), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 104/137 (76%), Positives = 118/137 (87%), Gaps = 2/137 (1%)
Query 16 EVTVETTSVFRADFLSELDAPAQAGTESAVSGVEGLPPGSALLVVKRGPNAGSRFLLDQA 75
E +VETTSVFRAD L E++ Q +ES+ +GVEGLP GSALLVVKRGPNAGSRFLLDQ
Sbjct 9 EASVETTSVFRADLLKEMETGVQ--SESSPAGVEGLPSGSALLVVKRGPNAGSRFLLDQD 66
Query 76 ITSAGRHPDSDIFLDDVTVSRRHAEFRLENNEFNVVDVGSLNGTYVNREPVDSAVLANGD 135
T+AGRHPDSDIFLDDVTVSRRHAEFR +++ VVDVGSLNGTYVNREP +SAVL+NGD
Sbjct 67 TTTAGRHPDSDIFLDDVTVSRRHAEFRRSGDDYEVVDVGSLNGTYVNREPKNSAVLSNGD 126
Query 136 EVQIGKFRLVFLTGPKQ 152
E+QIGKFRLVFL G K+
Sbjct 127 EIQIGKFRLVFLNGAKE 143
>gi|302527602|ref|ZP_07279944.1| FHA domain-containing protein [Streptomyces sp. AA4]
gi|302436497|gb|EFL08313.1| FHA domain-containing protein [Streptomyces sp. AA4]
Length=156
Score = 208 bits (530), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 106/140 (76%), Positives = 117/140 (84%), Gaps = 2/140 (1%)
Query 16 EVTVETTSVFRADFLSELDAPAQAG--TESAVSGVEGLPPGSALLVVKRGPNAGSRFLLD 73
E + E TSVFRADFL++++ ++ E+ V GV+ LPPGSALLVVKRGPNAGSRFLLD
Sbjct 12 EQSPERTSVFRADFLADMEGQQESAPAAEAPVQGVDALPPGSALLVVKRGPNAGSRFLLD 71
Query 74 QAITSAGRHPDSDIFLDDVTVSRRHAEFRLENNEFNVVDVGSLNGTYVNREPVDSAVLAN 133
+ TSAGRHPDSDIFLDDVTVSRRHAEFR E EF V+DVGSLNGTYVNREPVD AVLA
Sbjct 72 RDTTSAGRHPDSDIFLDDVTVSRRHAEFRREGGEFVVIDVGSLNGTYVNREPVDQAVLAG 131
Query 134 GDEVQIGKFRLVFLTGPKQG 153
GDEVQIGKFRLVFLTGP G
Sbjct 132 GDEVQIGKFRLVFLTGPGHG 151
>gi|300786867|ref|YP_003767158.1| FHA domain-containing protein [Amycolatopsis mediterranei U32]
gi|299796381|gb|ADJ46756.1| FHA domain-containing protein [Amycolatopsis mediterranei U32]
gi|340528354|gb|AEK43559.1| FHA domain-containing protein [Amycolatopsis mediterranei S699]
Length=154
Score = 208 bits (529), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 107/138 (78%), Positives = 115/138 (84%), Gaps = 1/138 (0%)
Query 16 EVTVETTSVFRADFLSELDAPAQAGTESAVSGVEGLPPGSALLVVKRGPNAGSRFLLDQA 75
E + E TSVFRADFL+E + + E+ V GV+ LPPGSALLVVKRGPNAGSRFLLD+
Sbjct 13 EQSPERTSVFRADFLAEAEG-REPAPEAPVQGVDALPPGSALLVVKRGPNAGSRFLLDRD 71
Query 76 ITSAGRHPDSDIFLDDVTVSRRHAEFRLENNEFNVVDVGSLNGTYVNREPVDSAVLANGD 135
TSAGRHPDSDIFLDDVTVSRRHAEFR E EF V+DVGSLNGTYVNREPVD AVLA GD
Sbjct 72 TTSAGRHPDSDIFLDDVTVSRRHAEFRREGGEFVVIDVGSLNGTYVNREPVDQAVLAGGD 131
Query 136 EVQIGKFRLVFLTGPKQG 153
EVQIGKFRLVFLTGP G
Sbjct 132 EVQIGKFRLVFLTGPGHG 149
>gi|336325542|ref|YP_004605508.1| oxoglutarate dehydrogenase inhibitor [Corynebacterium resistens
DSM 45100]
gi|336101524|gb|AEI09344.1| oxoglutarate dehydrogenase inhibitor [Corynebacterium resistens
DSM 45100]
Length=142
Score = 207 bits (528), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 103/136 (76%), Positives = 119/136 (88%), Gaps = 2/136 (1%)
Query 16 EVTVETTSVFRADFLSELDAPAQAGTESAVSGVEGLPPGSALLVVKRGPNAGSRFLLDQA 75
E +VETTSVFRAD L E+++ +QA ++A +GVEGLP GSALLVVKRGPNAGSRFLLDQ
Sbjct 9 EASVETTSVFRADLLKEMESGSQA--DAAPAGVEGLPEGSALLVVKRGPNAGSRFLLDQD 66
Query 76 ITSAGRHPDSDIFLDDVTVSRRHAEFRLENNEFNVVDVGSLNGTYVNREPVDSAVLANGD 135
T+AGRHPDSDIFLDDVTVSRRHAEFR +++ VVDVGSLNGTYVNREP +S+VL+NGD
Sbjct 67 TTAAGRHPDSDIFLDDVTVSRRHAEFRRNGDQYEVVDVGSLNGTYVNREPKNSSVLSNGD 126
Query 136 EVQIGKFRLVFLTGPK 151
E+QIGKFRLVFL G K
Sbjct 127 EIQIGKFRLVFLNGTK 142
>gi|331696970|ref|YP_004333209.1| FHA domain-containing protein [Pseudonocardia dioxanivorans CB1190]
gi|326951659|gb|AEA25356.1| FHA domain containing protein [Pseudonocardia dioxanivorans CB1190]
Length=148
Score = 206 bits (524), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 106/137 (78%), Positives = 120/137 (88%), Gaps = 4/137 (2%)
Query 16 EVTVETTSVFRADFLSELDAPAQAGTESAVSGVEGLPPGSALLVVKRGPNAGSRFLLDQA 75
E ETTSVFRADFL++++ PAQ + VSG++ LPPGSALLVVKRGPNAGSRFLLD+
Sbjct 12 ERAPETTSVFRADFLADVEQPAQ---DQPVSGLDALPPGSALLVVKRGPNAGSRFLLDRP 68
Query 76 ITSAGRHPDSDIFLDDVTVSRRHAEFRLENNEFNVVDVGSLNGTYVNREPVDSAVLANGD 135
TSAGRHPDSDIFLDDVTVSRRHAEFR + +F VVDVGSLNGTYVNREPVD+AVLANGD
Sbjct 69 TTSAGRHPDSDIFLDDVTVSRRHAEFR-RDGDFVVVDVGSLNGTYVNREPVDTAVLANGD 127
Query 136 EVQIGKFRLVFLTGPKQ 152
EVQIGKFRL+FLTG ++
Sbjct 128 EVQIGKFRLIFLTGARE 144
>gi|68535980|ref|YP_250685.1| hypothetical protein jk0903 [Corynebacterium jeikeium K411]
gi|260578680|ref|ZP_05846588.1| FHA-domain-containing protein [Corynebacterium jeikeium ATCC
43734]
gi|123651122|sp|Q4JVU0.1|ODHI_CORJK RecName: Full=Oxoglutarate dehydrogenase inhibitor
gi|68263579|emb|CAI37067.1| conserved hypothetical protein [Corynebacterium jeikeium K411]
gi|258603177|gb|EEW16446.1| FHA-domain-containing protein [Corynebacterium jeikeium ATCC
43734]
Length=144
Score = 206 bits (523), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 101/137 (74%), Positives = 119/137 (87%), Gaps = 2/137 (1%)
Query 16 EVTVETTSVFRADFLSELDAPAQAGTESAVSGVEGLPPGSALLVVKRGPNAGSRFLLDQA 75
E +VETTSVFRAD L E+++ +Q +++ +GVEGLP GSALLVVKRGPNAGSRFLLDQ
Sbjct 9 EASVETTSVFRADLLKEMESGSQH--DASPAGVEGLPEGSALLVVKRGPNAGSRFLLDQE 66
Query 76 ITSAGRHPDSDIFLDDVTVSRRHAEFRLENNEFNVVDVGSLNGTYVNREPVDSAVLANGD 135
T+AGRHPDSDIFLDDVTVSRRHAEFR +++ VVDVGSLNGTYVNREP +S+VL+NGD
Sbjct 67 TTAAGRHPDSDIFLDDVTVSRRHAEFRRNGDQYEVVDVGSLNGTYVNREPKNSSVLSNGD 126
Query 136 EVQIGKFRLVFLTGPKQ 152
E+QIGKFRLVFL G K+
Sbjct 127 EIQIGKFRLVFLNGSKE 143
>gi|257056262|ref|YP_003134094.1| FHA domain-containing protein [Saccharomonospora viridis DSM
43017]
gi|256586134|gb|ACU97267.1| FHA domain-containing protein [Saccharomonospora viridis DSM
43017]
Length=152
Score = 205 bits (521), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 104/135 (78%), Positives = 113/135 (84%), Gaps = 0/135 (0%)
Query 16 EVTVETTSVFRADFLSELDAPAQAGTESAVSGVEGLPPGSALLVVKRGPNAGSRFLLDQA 75
E + E TSVFRADFLSE ++ E +GV+ LP GSALLVVKRGPNAGSRFLLD+
Sbjct 12 EQSPERTSVFRADFLSEAESQETPAVEPQDAGVDALPAGSALLVVKRGPNAGSRFLLDRD 71
Query 76 ITSAGRHPDSDIFLDDVTVSRRHAEFRLENNEFNVVDVGSLNGTYVNREPVDSAVLANGD 135
TSAGRHPDSDIFLDDVTVSRRHAEFR E EF V+DVGSLNGTYVNREPVD A+L+NGD
Sbjct 72 TTSAGRHPDSDIFLDDVTVSRRHAEFRREGGEFVVIDVGSLNGTYVNREPVDQAILSNGD 131
Query 136 EVQIGKFRLVFLTGP 150
EVQIGKFRLVFLTGP
Sbjct 132 EVQIGKFRLVFLTGP 146
>gi|237785461|ref|YP_002906166.1| inhibitor of ODH activity [Corynebacterium kroppenstedtii DSM
44385]
gi|237758373|gb|ACR17623.1| inhibitor of ODH activity [Corynebacterium kroppenstedtii DSM
44385]
Length=143
Score = 202 bits (515), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 101/136 (75%), Positives = 117/136 (87%), Gaps = 3/136 (2%)
Query 16 EVTVETTSVFRADFLSELDAPAQAGTESAVSGVEGLPPGSALLVVKRGPNAGSRFLLDQA 75
E +VETTSVFRAD L E+++ A ++S+ GV+GLP GSALLVVKRGPNAGSRFLLDQ
Sbjct 9 ESSVETTSVFRADLLKEMESGA---SDSSAPGVDGLPEGSALLVVKRGPNAGSRFLLDQP 65
Query 76 ITSAGRHPDSDIFLDDVTVSRRHAEFRLENNEFNVVDVGSLNGTYVNREPVDSAVLANGD 135
T+AGRHPDSDIFLDDVTVSRRHAEFR +++F VVDVGSLNGTYVNREP +S+ L+NGD
Sbjct 66 TTTAGRHPDSDIFLDDVTVSRRHAEFRKNDDQFEVVDVGSLNGTYVNREPKNSSELSNGD 125
Query 136 EVQIGKFRLVFLTGPK 151
E+QIGKFRLVFL G K
Sbjct 126 EIQIGKFRLVFLNGQK 141
>gi|296140042|ref|YP_003647285.1| FHA domain-containing protein [Tsukamurella paurometabola DSM
20162]
gi|296028176|gb|ADG78946.1| FHA domain containing protein [Tsukamurella paurometabola DSM
20162]
Length=146
Score = 202 bits (513), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 102/139 (74%), Positives = 115/139 (83%), Gaps = 0/139 (0%)
Query 9 EKDQTSDEVTVETTSVFRADFLSELDAPAQAGTESAVSGVEGLPPGSALLVVKRGPNAGS 68
E D+ DE VETTSVFRAD + E+DA A +++ V+G+E LP G+ALLVVKRGPNAGS
Sbjct 3 ENDKGFDEAPVETTSVFRADIIREMDATGGAESDAPVTGLENLPAGAALLVVKRGPNAGS 62
Query 69 RFLLDQAITSAGRHPDSDIFLDDVTVSRRHAEFRLENNEFNVVDVGSLNGTYVNREPVDS 128
RFLLDQ TSAGRHPDSDIFLDDVTVSRRHAEFR F VVDVGSLNGTYVNREPVD+
Sbjct 63 RFLLDQEATSAGRHPDSDIFLDDVTVSRRHAEFRAVEGGFTVVDVGSLNGTYVNREPVDA 122
Query 129 AVLANGDEVQIGKFRLVFL 147
+ L++GDEVQIGKFRLVF
Sbjct 123 SPLSHGDEVQIGKFRLVFY 141
>gi|134100380|ref|YP_001106041.1| FHA domain-containing protein [Saccharopolyspora erythraea NRRL
2338]
gi|291007367|ref|ZP_06565340.1| FHA domain-containing protein [Saccharopolyspora erythraea NRRL
2338]
gi|133913003|emb|CAM03116.1| FHA domain containing protein [Saccharopolyspora erythraea NRRL
2338]
Length=154
Score = 201 bits (511), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 108/139 (78%), Positives = 117/139 (85%), Gaps = 2/139 (1%)
Query 16 EVTVETTSVFRADFLSELDAPAQAGTES-AVSGVEGLPPGSALLVVKRGPNAGSRFLLDQ 74
E + ETTSVFR FLSE ++ A E A SGV+ LP G+ALLVVKRGPNAGSRFLLD+
Sbjct 13 EQSPETTSVFRP-FLSEPESTESAPAEQPAASGVDALPAGAALLVVKRGPNAGSRFLLDR 71
Query 75 AITSAGRHPDSDIFLDDVTVSRRHAEFRLENNEFNVVDVGSLNGTYVNREPVDSAVLANG 134
TSAGRHPDSDIFLDDVTVSRRHAEFR E N+F VVDVGSLNGTYVNREPVD++VLANG
Sbjct 72 DTTSAGRHPDSDIFLDDVTVSRRHAEFRREGNDFVVVDVGSLNGTYVNREPVDTSVLANG 131
Query 135 DEVQIGKFRLVFLTGPKQG 153
DEVQIGKFRLVFLTGP G
Sbjct 132 DEVQIGKFRLVFLTGPIDG 150
>gi|19552656|ref|NP_600658.1| FHA-domain-containing protein [Corynebacterium glutamicum ATCC
13032]
gi|62390324|ref|YP_225726.1| signal transduction protein, FHA domain [Corynebacterium glutamicum
ATCC 13032]
gi|145295574|ref|YP_001138395.1| hypothetical protein cgR_1501 [Corynebacterium glutamicum R]
6 more sequence titles
Length=143
Score = 198 bits (503), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 98/137 (72%), Positives = 111/137 (82%), Gaps = 2/137 (1%)
Query 16 EVTVETTSVFRADFLSELDAPAQAGTESAVSGVEGLPPGSALLVVKRGPNAGSRFLLDQA 75
E VETTSVFRAD L E+++ GT A +G E LP GSALLVVKRGPNAG+RFLLDQ
Sbjct 9 EPQVETTSVFRADLLKEMES--STGTAPASTGAENLPAGSALLVVKRGPNAGARFLLDQP 66
Query 76 ITSAGRHPDSDIFLDDVTVSRRHAEFRLENNEFNVVDVGSLNGTYVNREPVDSAVLANGD 135
T+AGRHP+SDIFLDDVTVSRRHAEFR+ EF VVDVGSLNGTYVNREP ++ V+ GD
Sbjct 67 TTTAGRHPESDIFLDDVTVSRRHAEFRINEGEFEVVDVGSLNGTYVNREPRNAQVMQTGD 126
Query 136 EVQIGKFRLVFLTGPKQ 152
E+QIGKFRLVFL GP +
Sbjct 127 EIQIGKFRLVFLAGPAE 143
Lambda K H
0.312 0.133 0.372
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 130518307686
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40