BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv1840c Length=515 Score E Sequences producing significant alignments: (Bits) Value gi|15841308|ref|NP_336345.1| PE_PGRS family protein [Mycobacteri... 866 0.0 gi|340626848|ref|YP_004745300.1| PE-PGRS family protein [Mycobac... 862 0.0 gi|313658721|ref|ZP_07815601.1| hypothetical protein MtubKV_0989... 861 0.0 gi|183982716|ref|YP_001851007.1| PE-PGRS family protein, PE_PGRS... 157 4e-36 gi|148824043|ref|YP_001288797.1| PE-PGRS family protein [Mycobac... 154 5e-35 gi|57117029|ref|YP_177909.1| PE-PGRS family protein [Mycobacteri... 153 6e-35 gi|339632862|ref|YP_004724504.1| PE-PGRS family protein [Mycobac... 153 7e-35 gi|254232019|ref|ZP_04925346.1| PE-PGRS family protein [Mycobact... 153 7e-35 gi|297635466|ref|ZP_06953246.1| PE-PGRS family protein [Mycobact... 153 7e-35 gi|31794030|ref|NP_856523.1| PE-PGRS family protein [Mycobacteri... 153 7e-35 gi|121638733|ref|YP_978957.1| PE-PGRS family protein [Mycobacter... 152 1e-34 gi|15842394|ref|NP_337431.1| PE_PGRS family protein [Mycobacteri... 152 1e-34 gi|340627846|ref|YP_004746298.1| PE-PGRS family protein [Mycobac... 152 2e-34 gi|148662694|ref|YP_001284217.1| PE-PGRS family protein [Mycobac... 152 2e-34 gi|339297525|gb|AEJ49635.1| PE-PGRS family protein [Mycobacteriu... 147 4e-33 gi|57116793|ref|YP_177763.1| PE-PGRS family protein [Mycobacteri... 145 1e-32 gi|31792060|ref|NP_854553.1| PE-PGRS family protein [Mycobacteri... 145 2e-32 gi|15840285|ref|NP_335322.1| PE_PGRS family protein [Mycobacteri... 145 2e-32 gi|289447454|ref|ZP_06437198.1| PE domain-containing protein-con... 144 3e-32 gi|118616864|ref|YP_905196.1| PE-PGRS family protein [Mycobacter... 144 3e-32 gi|183982655|ref|YP_001850946.1| PE-PGRS family protein [Mycobac... 143 9e-32 gi|306793280|ref|ZP_07431582.1| putative PE family protein [Myco... 142 1e-31 gi|289745728|ref|ZP_06505106.1| PE family protein [Mycobacterium... 142 1e-31 gi|289750413|ref|ZP_06509791.1| PE-PGRS family protein [Mycobact... 138 2e-30 gi|183982114|ref|YP_001850405.1| PE-PGRS family protein [Mycobac... 138 2e-30 gi|183985012|ref|YP_001853303.1| PE-PGRS family protein [Mycobac... 137 4e-30 gi|340626105|ref|YP_004744557.1| PE-PGRS family protein [Mycobac... 135 1e-29 gi|148824595|ref|YP_001289349.1| PE-PGRS family protein [Mycobac... 135 1e-29 gi|148663252|ref|YP_001284775.1| PE-PGRS family protein [Mycobac... 135 2e-29 gi|15842981|ref|NP_338018.1| PE_PGRS family protein [Mycobacteri... 135 3e-29 gi|341603337|emb|CCC66018.1| PE-PGRS family protein [Mycobacteri... 134 3e-29 gi|121639312|ref|YP_979536.1| PE-PGRS family protein [Mycobacter... 134 3e-29 gi|31794568|ref|NP_857061.1| PE-PGRS family protein [Mycobacteri... 134 3e-29 gi|31793030|ref|NP_855523.1| PE-PGRS family protein [Mycobacteri... 134 3e-29 gi|57117101|ref|YP_177968.1| PE-PGRS family protein [Mycobacteri... 134 4e-29 gi|339296212|gb|AEJ48323.1| hypothetical protein CCDC5079_3134 [... 134 5e-29 gi|339633393|ref|YP_004725035.1| PE-PGRS family protein [Mycobac... 133 6e-29 gi|183980330|ref|YP_001848621.1| PE-PGRS family protein, PE_PGRS... 132 2e-28 gi|339298403|gb|AEJ50513.1| PE-PGRS family protein [Mycobacteriu... 131 3e-28 gi|339294775|gb|AEJ46886.1| hypothetical protein CCDC5079_1696 [... 130 6e-28 gi|289574445|ref|ZP_06454672.1| predicted protein [Mycobacterium... 129 1e-27 gi|289569833|ref|ZP_06450060.1| PE-PGRS family protein [Mycobact... 129 2e-27 gi|339631822|ref|YP_004723464.1| PE-PGRS family protein [Mycobac... 129 2e-27 gi|57116908|ref|YP_177832.1| PE-PGRS family protein [Mycobacteri... 129 2e-27 gi|31792957|ref|NP_855450.1| PE-PGRS family protein [Mycobacteri... 128 2e-27 gi|289447383|ref|ZP_06437127.1| PE-PGRS family protein [Mycobact... 128 2e-27 gi|294996728|ref|ZP_06802419.1| PE-PGRS family protein [Mycobact... 127 4e-27 gi|51832320|gb|AAU10330.1| PE_PGRS 33 [Mycobacterium tuberculosis] 127 4e-27 gi|31793008|ref|NP_855501.1| PE-PGRS family protein [Mycobacteri... 127 4e-27 gi|254550849|ref|ZP_05141296.1| hypothetical protein Mtube_10381... 125 2e-26 >gi|15841308|ref|NP_336345.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551] gi|57116924|ref|YP_177847.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Rv] gi|148661646|ref|YP_001283169.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra] 19 more sequence titles Length=515 Score = 866 bits (2237), Expect = 0.0, Method: Compositional matrix adjust. Identities = 515/515 (100%), Positives = 515/515 (100%), Gaps = 0/515 (0%) Query 1 MSFVVAAPEVVVAAASDLAGIGSAIGAANAAAAVPTMGVLAAGADEVSAAVADLFGAHAQ 60 MSFVVAAPEVVVAAASDLAGIGSAIGAANAAAAVPTMGVLAAGADEVSAAVADLFGAHAQ Sbjct 1 MSFVVAAPEVVVAAASDLAGIGSAIGAANAAAAVPTMGVLAAGADEVSAAVADLFGAHAQ 60 Query 61 AYQALSAQAALFHEQFVHAMTAGAGAYAGAEAADAAALDVLNGPFQALFGRPLIGDGANG 120 AYQALSAQAALFHEQFVHAMTAGAGAYAGAEAADAAALDVLNGPFQALFGRPLIGDGANG Sbjct 61 AYQALSAQAALFHEQFVHAMTAGAGAYAGAEAADAAALDVLNGPFQALFGRPLIGDGANG 120 Query 121 APGQPGGPGGLLYGNGGNGGNGGIGQPGGAGGDAGLIGNGGNGGIGGPGATGLAGGAGGV 180 APGQPGGPGGLLYGNGGNGGNGGIGQPGGAGGDAGLIGNGGNGGIGGPGATGLAGGAGGV Sbjct 121 APGQPGGPGGLLYGNGGNGGNGGIGQPGGAGGDAGLIGNGGNGGIGGPGATGLAGGAGGV 180 Query 181 GGLLFGDGGNGGAGGLGTGPVGATGGIGGPGGAAVGLFGHGGAGGAGGLGKAGFAGGAGG 240 GGLLFGDGGNGGAGGLGTGPVGATGGIGGPGGAAVGLFGHGGAGGAGGLGKAGFAGGAGG Sbjct 181 GGLLFGDGGNGGAGGLGTGPVGATGGIGGPGGAAVGLFGHGGAGGAGGLGKAGFAGGAGG 240 Query 241 TGGTGGLLYGNGGNGGNVPSGAADGGAGGDARLIGNGGDGGSVGAAPTGIGNGGNGGNGG 300 TGGTGGLLYGNGGNGGNVPSGAADGGAGGDARLIGNGGDGGSVGAAPTGIGNGGNGGNGG Sbjct 241 TGGTGGLLYGNGGNGGNVPSGAADGGAGGDARLIGNGGDGGSVGAAPTGIGNGGNGGNGG 300 Query 301 WLYGDGGSGGSTLQGFSDGGTGGNAGMFGDGGNGGFSFFDGNGGDGGTGGTLIGNGGDGG 360 WLYGDGGSGGSTLQGFSDGGTGGNAGMFGDGGNGGFSFFDGNGGDGGTGGTLIGNGGDGG Sbjct 301 WLYGDGGSGGSTLQGFSDGGTGGNAGMFGDGGNGGFSFFDGNGGDGGTGGTLIGNGGDGG 360 Query 361 NSVQTDGFLRGHGGDGGNAVGLIGNGGAGGAGSAGTGVFAPGGGSGGNGGNGALLVGNGG 420 NSVQTDGFLRGHGGDGGNAVGLIGNGGAGGAGSAGTGVFAPGGGSGGNGGNGALLVGNGG Sbjct 361 NSVQTDGFLRGHGGDGGNAVGLIGNGGAGGAGSAGTGVFAPGGGSGGNGGNGALLVGNGG 420 Query 421 AGGSGGPTQIPSVAVPVTGAGGTGGNGGTAGLIGNGGNGGAAGVSGDGTPGTGGNGGYAQ 480 AGGSGGPTQIPSVAVPVTGAGGTGGNGGTAGLIGNGGNGGAAGVSGDGTPGTGGNGGYAQ Sbjct 421 AGGSGGPTQIPSVAVPVTGAGGTGGNGGTAGLIGNGGNGGAAGVSGDGTPGTGGNGGYAQ 480 Query 481 LIGDGGDGGPGDSGGPGGSGGTGGTLAGQNGSPGG 515 LIGDGGDGGPGDSGGPGGSGGTGGTLAGQNGSPGG Sbjct 481 LIGDGGDGGPGDSGGPGGSGGTGGTLAGQNGSPGG 515 >gi|340626848|ref|YP_004745300.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059] gi|340005038|emb|CCC44187.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059] Length=515 Score = 862 bits (2226), Expect = 0.0, Method: Compositional matrix adjust. Identities = 513/515 (99%), Positives = 513/515 (99%), Gaps = 0/515 (0%) Query 1 MSFVVAAPEVVVAAASDLAGIGSAIGAANAAAAVPTMGVLAAGADEVSAAVADLFGAHAQ 60 MSFVVA PEVVVAAASDLAGIGSAIGAANAAAAVPTMGVLAAGADEVSAAVADLFGAHAQ Sbjct 1 MSFVVAVPEVVVAAASDLAGIGSAIGAANAAAAVPTMGVLAAGADEVSAAVADLFGAHAQ 60 Query 61 AYQALSAQAALFHEQFVHAMTAGAGAYAGAEAADAAALDVLNGPFQALFGRPLIGDGANG 120 AYQALSAQAALFHEQFVHAMTAGAGAYAGAEAADAAALDVLNGPFQALFGRPLIGDGANG Sbjct 61 AYQALSAQAALFHEQFVHAMTAGAGAYAGAEAADAAALDVLNGPFQALFGRPLIGDGANG 120 Query 121 APGQPGGPGGLLYGNGGNGGNGGIGQPGGAGGDAGLIGNGGNGGIGGPGATGLAGGAGGV 180 APGQPGGPGGLLYGNGGNGGNGGIGQPGGAGGDAGLIGNGGNGGIGGPGATGLAGGAGGV Sbjct 121 APGQPGGPGGLLYGNGGNGGNGGIGQPGGAGGDAGLIGNGGNGGIGGPGATGLAGGAGGV 180 Query 181 GGLLFGDGGNGGAGGLGTGPVGATGGIGGPGGAAVGLFGHGGAGGAGGLGKAGFAGGAGG 240 GGLLFGDGGNGGAGGLGTGPVGATGGIGGPGGAAVGLFGHGGAGGAGGLGKAGFAGGAGG Sbjct 181 GGLLFGDGGNGGAGGLGTGPVGATGGIGGPGGAAVGLFGHGGAGGAGGLGKAGFAGGAGG 240 Query 241 TGGTGGLLYGNGGNGGNVPSGAADGGAGGDARLIGNGGDGGSVGAAPTGIGNGGNGGNGG 300 TGGTGGLLYGNGGNGGNVPSGAADGGAGGDARLIGNGGDGGSVGAAPTGIGNGGNGGNGG Sbjct 241 TGGTGGLLYGNGGNGGNVPSGAADGGAGGDARLIGNGGDGGSVGAAPTGIGNGGNGGNGG 300 Query 301 WLYGDGGSGGSTLQGFSDGGTGGNAGMFGDGGNGGFSFFDGNGGDGGTGGTLIGNGGDGG 360 WLYGDGGSGGSTLQGFSDGGTGGNAGMFGDGGNGGFSFFDGNGGDGGTGGTLIGNGGDGG Sbjct 301 WLYGDGGSGGSTLQGFSDGGTGGNAGMFGDGGNGGFSFFDGNGGDGGTGGTLIGNGGDGG 360 Query 361 NSVQTDGFLRGHGGDGGNAVGLIGNGGAGGAGSAGTGVFAPGGGSGGNGGNGALLVGNGG 420 NSVQTDGFLRGHGGDGGNAVGLIGNGGAGGAGSAGTGVFAPGGGSGGNGGNGALLVGNGG Sbjct 361 NSVQTDGFLRGHGGDGGNAVGLIGNGGAGGAGSAGTGVFAPGGGSGGNGGNGALLVGNGG 420 Query 421 AGGSGGPTQIPSVAVPVTGAGGTGGNGGTAGLIGNGGNGGAAGVSGDGTPGTGGNGGYAQ 480 AGGSGGPTQIPSVAVPVTGAGGTGGNGGTAGLIGNGGNGGAAGVSGDGTPGTGGNGG AQ Sbjct 421 AGGSGGPTQIPSVAVPVTGAGGTGGNGGTAGLIGNGGNGGAAGVSGDGTPGTGGNGGNAQ 480 Query 481 LIGDGGDGGPGDSGGPGGSGGTGGTLAGQNGSPGG 515 LIGDGGDGGPGDSGGPGGSGGTGGTLAGQNGSPGG Sbjct 481 LIGDGGDGGPGDSGGPGGSGGTGGTLAGQNGSPGG 515 >gi|313658721|ref|ZP_07815601.1| hypothetical protein MtubKV_09891 [Mycobacterium tuberculosis KZN V2475] Length=515 Score = 861 bits (2224), Expect = 0.0, Method: Compositional matrix adjust. Identities = 514/515 (99%), Positives = 514/515 (99%), Gaps = 0/515 (0%) Query 1 MSFVVAAPEVVVAAASDLAGIGSAIGAANAAAAVPTMGVLAAGADEVSAAVADLFGAHAQ 60 MSFVVAAPEVVVAAASDLAGIGSAIGAANAAAAVPTMGVLAAGADEVSAAVADLFGAHAQ Sbjct 1 MSFVVAAPEVVVAAASDLAGIGSAIGAANAAAAVPTMGVLAAGADEVSAAVADLFGAHAQ 60 Query 61 AYQALSAQAALFHEQFVHAMTAGAGAYAGAEAADAAALDVLNGPFQALFGRPLIGDGANG 120 AYQALSAQAALFHEQFVHAMTAGAGAYAGAEAADAAALDVLNGPFQALFGRPLIGDGANG Sbjct 61 AYQALSAQAALFHEQFVHAMTAGAGAYAGAEAADAAALDVLNGPFQALFGRPLIGDGANG 120 Query 121 APGQPGGPGGLLYGNGGNGGNGGIGQPGGAGGDAGLIGNGGNGGIGGPGATGLAGGAGGV 180 APGQPGGPGGLLYGNGGNGGNGGIGQPGGAGGDAGLIGNGGNGGIGGPGATGLAGGAGGV Sbjct 121 APGQPGGPGGLLYGNGGNGGNGGIGQPGGAGGDAGLIGNGGNGGIGGPGATGLAGGAGGV 180 Query 181 GGLLFGDGGNGGAGGLGTGPVGATGGIGGPGGAAVGLFGHGGAGGAGGLGKAGFAGGAGG 240 GGLLFGDGGNGGAGGLGTGPVGATGGIGGPGGAAVGLFGHGGAGGAGG GKAGFAGGAGG Sbjct 181 GGLLFGDGGNGGAGGLGTGPVGATGGIGGPGGAAVGLFGHGGAGGAGGXGKAGFAGGAGG 240 Query 241 TGGTGGLLYGNGGNGGNVPSGAADGGAGGDARLIGNGGDGGSVGAAPTGIGNGGNGGNGG 300 TGGTGGLLYGNGGNGGNVPSGAADGGAGGDARLIGNGGDGGSVGAAPTGIGNGGNGGNGG Sbjct 241 TGGTGGLLYGNGGNGGNVPSGAADGGAGGDARLIGNGGDGGSVGAAPTGIGNGGNGGNGG 300 Query 301 WLYGDGGSGGSTLQGFSDGGTGGNAGMFGDGGNGGFSFFDGNGGDGGTGGTLIGNGGDGG 360 WLYGDGGSGGSTLQGFSDGGTGGNAGMFGDGGNGGFSFFDGNGGDGGTGGTLIGNGGDGG Sbjct 301 WLYGDGGSGGSTLQGFSDGGTGGNAGMFGDGGNGGFSFFDGNGGDGGTGGTLIGNGGDGG 360 Query 361 NSVQTDGFLRGHGGDGGNAVGLIGNGGAGGAGSAGTGVFAPGGGSGGNGGNGALLVGNGG 420 NSVQTDGFLRGHGGDGGNAVGLIGNGGAGGAGSAGTGVFAPGGGSGGNGGNGALLVGNGG Sbjct 361 NSVQTDGFLRGHGGDGGNAVGLIGNGGAGGAGSAGTGVFAPGGGSGGNGGNGALLVGNGG 420 Query 421 AGGSGGPTQIPSVAVPVTGAGGTGGNGGTAGLIGNGGNGGAAGVSGDGTPGTGGNGGYAQ 480 AGGSGGPTQIPSVAVPVTGAGGTGGNGGTAGLIGNGGNGGAAGVSGDGTPGTGGNGGYAQ Sbjct 421 AGGSGGPTQIPSVAVPVTGAGGTGGNGGTAGLIGNGGNGGAAGVSGDGTPGTGGNGGYAQ 480 Query 481 LIGDGGDGGPGDSGGPGGSGGTGGTLAGQNGSPGG 515 LIGDGGDGGPGDSGGPGGSGGTGGTLAGQNGSPGG Sbjct 481 LIGDGGDGGPGDSGGPGGSGGTGGTLAGQNGSPGG 515 >gi|183982716|ref|YP_001851007.1| PE-PGRS family protein, PE_PGRS34_1 [Mycobacterium marinum M] gi|183176042|gb|ACC41152.1| PE-PGRS family protein, PE_PGRS34_1 [Mycobacterium marinum M] Length=521 Score = 157 bits (397), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 88/131 (68%), Positives = 99/131 (76%), Gaps = 4/131 (3%) Query 1 MSFVVAAPEVVVAAASDLAGIGSAIGAANAAAAVPTMGVLAAGADEVSAAVADLFGAHAQ 60 MSFVVAAPE+V AAASD+A IGS I AN AA PT VLAAGADEVSA +A LF AH Q Sbjct 1 MSFVVAAPEMVQAAASDIASIGSTINMANVAATAPTTAVLAAGADEVSAVIAALFAAHGQ 60 Query 61 AYQALSAQAALFHEQFVHAMTAGAGAYAGAEAADAAALDVL----NGPFQALFGRPLIGD 116 AYQ LSAQAA FH+QFV AMT+ AGAY+GAEAA+ + L L NG A+ GRPLIG+ Sbjct 61 AYQTLSAQAAQFHDQFVAAMTSAAGAYSGAEAANVSPLQSLLDAANGETMAMLGRPLIGN 120 Query 117 GANGAPGQPGG 127 GA+GAPGQ G Sbjct 121 GADGAPGQAGA 131 >gi|148824043|ref|YP_001288797.1| PE-PGRS family protein [Mycobacterium tuberculosis F11] gi|253798061|ref|YP_003031062.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 1435] gi|254232947|ref|ZP_04926274.1| PE-PGRS family protein [Mycobacterium tuberculosis C] 6 more sequence titles Length=663 Score = 154 bits (388), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 77/129 (60%), Positives = 99/129 (77%), Gaps = 5/129 (3%) Query 1 MSFVVAAPEVVVAAASDLAGIGSAIGAANAAAAVPTMGVLAAGADEVSAAVADLFGAHAQ 60 M +VVA+P+++ AAA++LA IGSAI AN AAA+PT+ V+AA ADEVS +A LFGAHA+ Sbjct 49 MLYVVASPDLMTAAATNLAEIGSAISTANGAAALPTVEVVAAAADEVSTQIAALFGAHAR 108 Query 61 AYQALSAQAALFHEQFVHAMTAGAGAYAGAEAADAA----ALDVLNGPFQALFGRPLIGD 116 +YQ LS QAA FH +FV A+T A +YA EAA+A+ ALDV+N P Q L GRPLIG+ Sbjct 109 SYQTLSTQAAAFHSRFVQALTTAAASYASVEAANASPLQVALDVINAPAQTLLGRPLIGN 168 Query 117 GANGA-PGQ 124 GA+G+ PGQ Sbjct 169 GADGSTPGQ 177 >gi|57117029|ref|YP_177909.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Rv] gi|7476147|pir||H70589 hypothetical glycine-rich protein Rv2853 - Mycobacterium tuberculosis (strain H37RV) gi|41352758|emb|CAE55525.1| PE-PGRS FAMILY PROTEIN [Mycobacterium tuberculosis H37Rv] gi|344220685|gb|AEN01316.1| PE-PGRS family protein [Mycobacterium tuberculosis CTRI-2] Length=615 Score = 153 bits (387), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 77/129 (60%), Positives = 99/129 (77%), Gaps = 5/129 (3%) Query 1 MSFVVAAPEVVVAAASDLAGIGSAIGAANAAAAVPTMGVLAAGADEVSAAVADLFGAHAQ 60 M +VVA+P+++ AAA++LA IGSAI AN AAA+PT+ V+AA ADEVS +A LFGAHA+ Sbjct 1 MLYVVASPDLMTAAATNLAEIGSAISTANGAAALPTVEVVAAAADEVSTQIAALFGAHAR 60 Query 61 AYQALSAQAALFHEQFVHAMTAGAGAYAGAEAADAA----ALDVLNGPFQALFGRPLIGD 116 +YQ LS QAA FH +FV A+T A +YA EAA+A+ ALDV+N P Q L GRPLIG+ Sbjct 61 SYQTLSTQAAAFHSRFVQALTTAAASYASVEAANASPLQVALDVINAPAQTLLGRPLIGN 120 Query 117 GANGA-PGQ 124 GA+G+ PGQ Sbjct 121 GADGSTPGQ 129 >gi|339632862|ref|YP_004724504.1| PE-PGRS family protein [Mycobacterium africanum GM041182] gi|339332218|emb|CCC27928.1| PE-PGRS family protein [Mycobacterium africanum GM041182] Length=615 Score = 153 bits (387), Expect = 7e-35, Method: Compositional matrix adjust. Identities = 77/129 (60%), Positives = 99/129 (77%), Gaps = 5/129 (3%) Query 1 MSFVVAAPEVVVAAASDLAGIGSAIGAANAAAAVPTMGVLAAGADEVSAAVADLFGAHAQ 60 M +VVA+P+++ AAA++LA IGSAI AN AAA+PT+ V+AA ADEVS +A LFGAHA+ Sbjct 1 MLYVVASPDLMTAAATNLAEIGSAISTANGAAALPTVEVVAAAADEVSTQIAALFGAHAR 60 Query 61 AYQALSAQAALFHEQFVHAMTAGAGAYAGAEAADAA----ALDVLNGPFQALFGRPLIGD 116 +YQ LS QAA FH +FV A+T A +YA EAA+A+ ALDV+N P Q L GRPLIG+ Sbjct 61 SYQTLSTQAAAFHSRFVQALTTAAASYASVEAANASPLQVALDVINAPAQTLLGRPLIGN 120 Query 117 GANGA-PGQ 124 GA+G+ PGQ Sbjct 121 GADGSTPGQ 129 >gi|254232019|ref|ZP_04925346.1| PE-PGRS family protein [Mycobacterium tuberculosis C] gi|124601078|gb|EAY60088.1| PE-PGRS family protein [Mycobacterium tuberculosis C] Length=509 Score = 153 bits (386), Expect = 7e-35, Method: Compositional matrix adjust. Identities = 228/231 (99%), Positives = 228/231 (99%), Gaps = 0/231 (0%) Query 285 AAPTGIGNGGNGGNGGWLYGDGGSGGSTLQGFSDGGTGGNAGMFGDGGNGGFSFFDGNGG 344 AAPTGIGNGGNGGNGGWLYGDGGSGGSTLQGFSDGGTGGNAGMFGDGGNGGFSFFDGN G Sbjct 279 AAPTGIGNGGNGGNGGWLYGDGGSGGSTLQGFSDGGTGGNAGMFGDGGNGGFSFFDGNDG 338 Query 345 DGGTGGTLIGNGGDGGNSVQTDGFLRGHGGDGGNAVGLIGNGGAGGAGSAGTGVFAPGGG 404 DG T GTLIGNGGDGGNSVQTDGFLRGHGGDGGNAVGLIGNGGAGGAGSAGTGVFAPGGG Sbjct 339 DGSTVGTLIGNGGDGGNSVQTDGFLRGHGGDGGNAVGLIGNGGAGGAGSAGTGVFAPGGG 398 Query 405 SGGNGGNGALLVGNGGAGGSGGPTQIPSVAVPVTGAGGTGGNGGTAGLIGNGGNGGAAGV 464 SGGNGGNGALLVGNGGAGGSGGPTQIPSVAVPVTGAGGTGGNGGTAGLIGNGGNGGAAGV Sbjct 399 SGGNGGNGALLVGNGGAGGSGGPTQIPSVAVPVTGAGGTGGNGGTAGLIGNGGNGGAAGV 458 Query 465 SGDGTPGTGGNGGYAQLIGDGGDGGPGDSGGPGGSGGTGGTLAGQNGSPGG 515 SGDGTPGTGGNGGYAQLIGDGGDGGPGDSGGPGGSGGTGGTLAGQNGSPGG Sbjct 459 SGDGTPGTGGNGGYAQLIGDGGDGGPGDSGGPGGSGGTGGTLAGQNGSPGG 509 Score = 151 bits (381), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 109/110 (99%), Positives = 110/110 (100%), Gaps = 0/110 (0%) Query 10 VVVAAASDLAGIGSAIGAANAAAAVPTMGVLAAGADEVSAAVADLFGAHAQAYQALSAQA 69 +VVAAASDLAGIGSAIGAANAAAAVPTMGVLAAGADEVSAAVADLFGAHAQAYQALSAQA Sbjct 1 MVVAAASDLAGIGSAIGAANAAAAVPTMGVLAAGADEVSAAVADLFGAHAQAYQALSAQA 60 Query 70 ALFHEQFVHAMTAGAGAYAGAEAADAAALDVLNGPFQALFGRPLIGDGAN 119 ALFHEQFVHAMTAGAGAYAGAEAADAAALDVLNGPFQALFGRPLIGDGAN Sbjct 61 ALFHEQFVHAMTAGAGAYAGAEAADAAALDVLNGPFQALFGRPLIGDGAN 110 >gi|297635466|ref|ZP_06953246.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 4207] gi|297732465|ref|ZP_06961583.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN R506] Length=615 Score = 153 bits (386), Expect = 7e-35, Method: Compositional matrix adjust. Identities = 77/129 (60%), Positives = 99/129 (77%), Gaps = 5/129 (3%) Query 1 MSFVVAAPEVVVAAASDLAGIGSAIGAANAAAAVPTMGVLAAGADEVSAAVADLFGAHAQ 60 M +VVA+P+++ AAA++LA IGSAI AN AAA+PT+ V+AA ADEVS +A LFGAHA+ Sbjct 1 MLYVVASPDLMTAAATNLAEIGSAISTANGAAALPTVEVVAAAADEVSTQIAALFGAHAR 60 Query 61 AYQALSAQAALFHEQFVHAMTAGAGAYAGAEAADAA----ALDVLNGPFQALFGRPLIGD 116 +YQ LS QAA FH +FV A+T A +YA EAA+A+ ALDV+N P Q L GRPLIG+ Sbjct 61 SYQTLSTQAAAFHSRFVQALTTAAASYASVEAANASPLQVALDVINAPAQTLLGRPLIGN 120 Query 117 GANGA-PGQ 124 GA+G+ PGQ Sbjct 121 GADGSTPGQ 129 >gi|31794030|ref|NP_856523.1| PE-PGRS family protein [Mycobacterium bovis AF2122/97] gi|31619624|emb|CAD95063.1| PE-PGRS FAMILY PROTEIN [Mycobacterium bovis AF2122/97] Length=615 Score = 153 bits (386), Expect = 7e-35, Method: Compositional matrix adjust. Identities = 77/129 (60%), Positives = 99/129 (77%), Gaps = 5/129 (3%) Query 1 MSFVVAAPEVVVAAASDLAGIGSAIGAANAAAAVPTMGVLAAGADEVSAAVADLFGAHAQ 60 M +VVA+P+++ AAA++LA IGSAI AN AAA+PT+ V+AA ADEVS +A LFGAHA+ Sbjct 1 MLYVVASPDLMTAAATNLAEIGSAISTANGAAALPTVEVVAAAADEVSTQIAALFGAHAR 60 Query 61 AYQALSAQAALFHEQFVHAMTAGAGAYAGAEAADAA----ALDVLNGPFQALFGRPLIGD 116 +YQ LS QAA FH +FV A+T A +YA EAA+A+ ALDV+N P Q L GRPLIG+ Sbjct 61 SYQTLSTQAAAFHSRFVQALTTAAASYASVEAANASPLQVALDVINAPAQTLLGRPLIGN 120 Query 117 GANGA-PGQ 124 GA+G+ PGQ Sbjct 121 GADGSTPGQ 129 >gi|121638733|ref|YP_978957.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224991225|ref|YP_002645914.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172] gi|121494381|emb|CAL72862.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224774340|dbj|BAH27146.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172] gi|341602771|emb|CCC65449.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Moreau RDJ] Length=597 Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 77/129 (60%), Positives = 99/129 (77%), Gaps = 5/129 (3%) Query 1 MSFVVAAPEVVVAAASDLAGIGSAIGAANAAAAVPTMGVLAAGADEVSAAVADLFGAHAQ 60 M +VVA+P+++ AAA++LA IGSAI AN AAA+PT+ V+AA ADEVS +A LFGAHA+ Sbjct 1 MLYVVASPDLMTAAATNLAEIGSAISTANGAAALPTVEVVAAAADEVSTQIAALFGAHAR 60 Query 61 AYQALSAQAALFHEQFVHAMTAGAGAYAGAEAADAA----ALDVLNGPFQALFGRPLIGD 116 +YQ LS QAA FH +FV A+T A +YA EAA+A+ ALDV+N P Q L GRPLIG+ Sbjct 61 SYQTLSTQAAAFHSRFVQALTTAAASYASVEAANASPLQVALDVINAPAQTLLGRPLIGN 120 Query 117 GANGA-PGQ 124 GA+G+ PGQ Sbjct 121 GADGSTPGQ 129 >gi|15842394|ref|NP_337431.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551] gi|13882694|gb|AAK47245.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551] Length=663 Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 77/129 (60%), Positives = 99/129 (77%), Gaps = 5/129 (3%) Query 1 MSFVVAAPEVVVAAASDLAGIGSAIGAANAAAAVPTMGVLAAGADEVSAAVADLFGAHAQ 60 M +VVA+P+++ AAA++LA IGSAI AN AAA+PT+ V+AA ADEVS +A LFGAHA+ Sbjct 49 MLYVVASPDLMTAAATNLAEIGSAISTANGAAALPTVEVVAAAADEVSTQIAALFGAHAR 108 Query 61 AYQALSAQAALFHEQFVHAMTAGAGAYAGAEAADAA----ALDVLNGPFQALFGRPLIGD 116 +YQ LS QAA FH +FV A+T A +YA EAA+A+ ALDV+N P Q L GRPLIG+ Sbjct 109 SYQTLSTQAAAFHSRFVQALTTAAASYASVEAANASPLQVALDVINAPAQTLLGRPLIGN 168 Query 117 GANGA-PGQ 124 GA+G+ PGQ Sbjct 169 GADGSTPGQ 177 >gi|340627846|ref|YP_004746298.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059] gi|340006036|emb|CCC45206.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059] Length=615 Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 77/129 (60%), Positives = 99/129 (77%), Gaps = 5/129 (3%) Query 1 MSFVVAAPEVVVAAASDLAGIGSAIGAANAAAAVPTMGVLAAGADEVSAAVADLFGAHAQ 60 M +VVA+P+++ AAA++LA IGSAI AN AAA+PT+ V+AA ADEVS +A LFGAHA+ Sbjct 1 MLYVVASPDLMTAAATNLAEIGSAISTANGAAALPTVEVVAAAADEVSTQIAALFGAHAR 60 Query 61 AYQALSAQAALFHEQFVHAMTAGAGAYAGAEAADAA----ALDVLNGPFQALFGRPLIGD 116 +YQ LS QAA FH +FV A+T A +YA EAA+A+ ALDV+N P Q L GRPLIG+ Sbjct 61 SYQTLSTQAAAFHSRFVQALTTAAASYASVEAANASPLQVALDVINAPAQTLLGRPLIGN 120 Query 117 GANGA-PGQ 124 GA+G+ PGQ Sbjct 121 GADGSTPGQ 129 >gi|148662694|ref|YP_001284217.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra] gi|148506846|gb|ABQ74655.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra] Length=614 Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 76/127 (60%), Positives = 98/127 (78%), Gaps = 5/127 (3%) Query 3 FVVAAPEVVVAAASDLAGIGSAIGAANAAAAVPTMGVLAAGADEVSAAVADLFGAHAQAY 62 +VVA+P+++ AAA++LA IGSAI AN AAA+PT+ V+AA ADEVS +A LFGAHA++Y Sbjct 2 YVVASPDLMTAAATNLAEIGSAISTANGAAALPTVEVVAAAADEVSTQIAALFGAHARSY 61 Query 63 QALSAQAALFHEQFVHAMTAGAGAYAGAEAADAA----ALDVLNGPFQALFGRPLIGDGA 118 Q LS QAA FH +FV A+T A +YA EAA+A+ ALDV+N P Q L GRPLIG+GA Sbjct 62 QTLSTQAAAFHSRFVQALTTAAASYASVEAANASPLQVALDVINAPAQTLLGRPLIGNGA 121 Query 119 NGA-PGQ 124 +G+ PGQ Sbjct 122 DGSTPGQ 128 >gi|339297525|gb|AEJ49635.1| PE-PGRS family protein [Mycobacterium tuberculosis CCDC5180] Length=650 Score = 147 bits (371), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 82/126 (66%), Positives = 97/126 (77%), Gaps = 4/126 (3%) Query 1 MSFVVAAPEVVVAAASDLAGIGSAIGAANAAAAVPTMGVLAAGADEVSAAVADLFGAHAQ 60 MS+V+A PE+V AAA++LA IGS + AANAAA PT GVLAAGADEVSAAVA LF HAQ Sbjct 1 MSYVLATPEMVAAAANNLAQIGSTLSAANAAALAPTTGVLAAGADEVSAAVASLFSGHAQ 60 Query 61 AYQALSAQAALFHEQFVHAMTAGAGAYAGAEAADAA----ALDVLNGPFQALFGRPLIGD 116 AYQ L QAA FHE+F+ A++ AGAY AEAA+A+ AL+V+N P Q L GRPLIG+ Sbjct 61 AYQTLGTQAAAFHERFIQALSTAAGAYGSAEAANASPLQQALNVINAPTQTLLGRPLIGN 120 Query 117 GANGAP 122 G NGAP Sbjct 121 GTNGAP 126 >gi|57116793|ref|YP_177763.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Rv] gi|148660649|ref|YP_001282172.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra] gi|7476127|pir||H70816 hypothetical glycine-rich protein Rv0872c - Mycobacterium tuberculosis (strain H37RV) gi|38490245|emb|CAE55332.1| PE-PGRS FAMILY PROTEIN [Mycobacterium tuberculosis H37Rv] gi|148504801|gb|ABQ72610.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra] Length=606 Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 82/126 (66%), Positives = 97/126 (77%), Gaps = 4/126 (3%) Query 1 MSFVVAAPEVVVAAASDLAGIGSAIGAANAAAAVPTMGVLAAGADEVSAAVADLFGAHAQ 60 MS+V+A PE+V AAA++LA IGS + AANAAA PT GVLAAGADEVSAAVA LF HAQ Sbjct 1 MSYVLATPEMVAAAANNLAQIGSTLSAANAAALAPTTGVLAAGADEVSAAVASLFSGHAQ 60 Query 61 AYQALSAQAALFHEQFVHAMTAGAGAYAGAEAADAA----ALDVLNGPFQALFGRPLIGD 116 AYQ L QAA FHE+F+ A++ AGAY AEAA+A+ AL+V+N P Q L GRPLIG+ Sbjct 61 AYQTLGTQAAAFHERFIQALSTAAGAYGSAEAANASPLQQALNVINAPTQTLLGRPLIGN 120 Query 117 GANGAP 122 G NGAP Sbjct 121 GTNGAP 126 >gi|31792060|ref|NP_854553.1| PE-PGRS family protein [Mycobacterium bovis AF2122/97] gi|31617647|emb|CAD93757.1| PE-PGRS FAMILY PROTEIN [Mycobacterium bovis AF2122/97] Length=608 Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 82/126 (66%), Positives = 97/126 (77%), Gaps = 4/126 (3%) Query 1 MSFVVAAPEVVVAAASDLAGIGSAIGAANAAAAVPTMGVLAAGADEVSAAVADLFGAHAQ 60 MS+V+A PE+V AAA++LA IGS + AANAAA PT GVLAAGADEVSAAVA LF HAQ Sbjct 1 MSYVLATPEMVAAAANNLAQIGSTLSAANAAALAPTTGVLAAGADEVSAAVASLFSGHAQ 60 Query 61 AYQALSAQAALFHEQFVHAMTAGAGAYAGAEAADAA----ALDVLNGPFQALFGRPLIGD 116 AYQ L QAA FHE+F+ A++ AGAY AEAA+A+ AL+V+N P Q L GRPLIG+ Sbjct 61 AYQTLGTQAAAFHERFIQALSTAAGAYGSAEAANASPLQQALNVINAPTQTLLGRPLIGN 120 Query 117 GANGAP 122 G NGAP Sbjct 121 GTNGAP 126 >gi|15840285|ref|NP_335322.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551] gi|121636795|ref|YP_977018.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148822080|ref|YP_001286834.1| PE-PGRS family protein [Mycobacterium tuberculosis F11] 18 more sequence titles Length=609 Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 82/126 (66%), Positives = 97/126 (77%), Gaps = 4/126 (3%) Query 1 MSFVVAAPEVVVAAASDLAGIGSAIGAANAAAAVPTMGVLAAGADEVSAAVADLFGAHAQ 60 MS+V+A PE+V AAA++LA IGS + AANAAA PT GVLAAGADEVSAAVA LF HAQ Sbjct 1 MSYVLATPEMVAAAANNLAQIGSTLSAANAAALAPTTGVLAAGADEVSAAVASLFSGHAQ 60 Query 61 AYQALSAQAALFHEQFVHAMTAGAGAYAGAEAADAA----ALDVLNGPFQALFGRPLIGD 116 AYQ L QAA FHE+F+ A++ AGAY AEAA+A+ AL+V+N P Q L GRPLIG+ Sbjct 61 AYQTLGTQAAAFHERFIQALSTAAGAYGSAEAANASPLQQALNVINAPTQTLLGRPLIGN 120 Query 117 GANGAP 122 G NGAP Sbjct 121 GTNGAP 126 >gi|289447454|ref|ZP_06437198.1| PE domain-containing protein-containing protein [Mycobacterium tuberculosis CPHL_A] gi|289420412|gb|EFD17613.1| PE domain-containing protein-containing protein [Mycobacterium tuberculosis CPHL_A] Length=304 Score = 144 bits (364), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 104/104 (100%), Positives = 104/104 (100%), Gaps = 0/104 (0%) Query 16 SDLAGIGSAIGAANAAAAVPTMGVLAAGADEVSAAVADLFGAHAQAYQALSAQAALFHEQ 75 SDLAGIGSAIGAANAAAAVPTMGVLAAGADEVSAAVADLFGAHAQAYQALSAQAALFHEQ Sbjct 16 SDLAGIGSAIGAANAAAAVPTMGVLAAGADEVSAAVADLFGAHAQAYQALSAQAALFHEQ 75 Query 76 FVHAMTAGAGAYAGAEAADAAALDVLNGPFQALFGRPLIGDGAN 119 FVHAMTAGAGAYAGAEAADAAALDVLNGPFQALFGRPLIGDGAN Sbjct 76 FVHAMTAGAGAYAGAEAADAAALDVLNGPFQALFGRPLIGDGAN 119 >gi|118616864|ref|YP_905196.1| PE-PGRS family protein [Mycobacterium ulcerans Agy99] gi|118568974|gb|ABL03725.1| PE-PGRS family protein [Mycobacterium ulcerans Agy99] Length=834 Score = 144 bits (364), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 101/128 (79%), Positives = 108/128 (85%), Gaps = 4/128 (3%) Query 1 MSFVVAAPEVVVAAASDLAGIGSAIGAANAAAAVPTMGVLAAGADEVSAAVADLFGAHAQ 60 MS+VVA+PE V AAASDLAGIGSA+ ANAAAA PT+ VLAAGADEVSAA+A FGAHAQ Sbjct 1 MSYVVASPEYVAAAASDLAGIGSALSTANAAAAAPTIEVLAAGADEVSAAIAAFFGAHAQ 60 Query 61 AYQALSAQAALFHEQFVHAMTAGAGAYAGAEAADA----AALDVLNGPFQALFGRPLIGD 116 AYQALS QA+ FH QFV AMTAGAGAYAGAEA +A AALDVLN P QALFGRPLIGD Sbjct 61 AYQALSEQASAFHLQFVQAMTAGAGAYAGAEAVNASPLQAALDVLNAPAQALFGRPLIGD 120 Query 117 GANGAPGQ 124 GA GAPGQ Sbjct 121 GAGGAPGQ 128 >gi|183982655|ref|YP_001850946.1| PE-PGRS family protein [Mycobacterium marinum M] gi|183175981|gb|ACC41091.1| PE-PGRS family protein [Mycobacterium marinum M] Length=625 Score = 143 bits (360), Expect = 9e-32, Method: Compositional matrix adjust. Identities = 91/126 (73%), Positives = 107/126 (85%), Gaps = 4/126 (3%) Query 1 MSFVVAAPEVVVAAASDLAGIGSAIGAANAAAAVPTMGVLAAGADEVSAAVADLFGAHAQ 60 MS+++AAPE+V AAA+DLA +GS+I AANAAAA PTM VLAAGADEVSA VA LF AHAQ Sbjct 1 MSYLIAAPEMVAAAATDLASVGSSISAANAAAAAPTMSVLAAGADEVSAVVAALFDAHAQ 60 Query 61 AYQALSAQAALFHEQFVHAMTAGAGAYAGAEAADAA----ALDVLNGPFQALFGRPLIGD 116 AYQ+LSAQAALFHEQFV A+ AGAG+YA AEAA + AL+++N P QALFGRPLIG+ Sbjct 61 AYQSLSAQAALFHEQFVQALNAGAGSYALAEAASVSPLQDALNLINAPTQALFGRPLIGN 120 Query 117 GANGAP 122 GA+GAP Sbjct 121 GADGAP 126 >gi|306793280|ref|ZP_07431582.1| putative PE family protein [Mycobacterium tuberculosis SUMu005] gi|308338264|gb|EFP27115.1| putative PE family protein [Mycobacterium tuberculosis SUMu005] Length=306 Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 104/104 (100%), Positives = 104/104 (100%), Gaps = 0/104 (0%) Query 16 SDLAGIGSAIGAANAAAAVPTMGVLAAGADEVSAAVADLFGAHAQAYQALSAQAALFHEQ 75 SDLAGIGSAIGAANAAAAVPTMGVLAAGADEVSAAVADLFGAHAQAYQALSAQAALFHEQ Sbjct 16 SDLAGIGSAIGAANAAAAVPTMGVLAAGADEVSAAVADLFGAHAQAYQALSAQAALFHEQ 75 Query 76 FVHAMTAGAGAYAGAEAADAAALDVLNGPFQALFGRPLIGDGAN 119 FVHAMTAGAGAYAGAEAADAAALDVLNGPFQALFGRPLIGDGAN Sbjct 76 FVHAMTAGAGAYAGAEAADAAALDVLNGPFQALFGRPLIGDGAN 119 >gi|289745728|ref|ZP_06505106.1| PE family protein [Mycobacterium tuberculosis 02_1987] gi|289686256|gb|EFD53744.1| PE family protein [Mycobacterium tuberculosis 02_1987] Length=286 Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 104/104 (100%), Positives = 104/104 (100%), Gaps = 0/104 (0%) Query 16 SDLAGIGSAIGAANAAAAVPTMGVLAAGADEVSAAVADLFGAHAQAYQALSAQAALFHEQ 75 SDLAGIGSAIGAANAAAAVPTMGVLAAGADEVSAAVADLFGAHAQAYQALSAQAALFHEQ Sbjct 16 SDLAGIGSAIGAANAAAAVPTMGVLAAGADEVSAAVADLFGAHAQAYQALSAQAALFHEQ 75 Query 76 FVHAMTAGAGAYAGAEAADAAALDVLNGPFQALFGRPLIGDGAN 119 FVHAMTAGAGAYAGAEAADAAALDVLNGPFQALFGRPLIGDGAN Sbjct 76 FVHAMTAGAGAYAGAEAADAAALDVLNGPFQALFGRPLIGDGAN 119 >gi|289750413|ref|ZP_06509791.1| PE-PGRS family protein [Mycobacterium tuberculosis T92] gi|289691000|gb|EFD58429.1| PE-PGRS family protein [Mycobacterium tuberculosis T92] Length=401 Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 259/259 (100%), Positives = 259/259 (100%), Gaps = 0/259 (0%) Query 257 NVPSGAADGGAGGDARLIGNGGDGGSVGAAPTGIGNGGNGGNGGWLYGDGGSGGSTLQGF 316 NVPSGAADGGAGGDARLIGNGGDGGSVGAAPTGIGNGGNGGNGGWLYGDGGSGGSTLQGF Sbjct 143 NVPSGAADGGAGGDARLIGNGGDGGSVGAAPTGIGNGGNGGNGGWLYGDGGSGGSTLQGF 202 Query 317 SDGGTGGNAGMFGDGGNGGFSFFDGNGGDGGTGGTLIGNGGDGGNSVQTDGFLRGHGGDG 376 SDGGTGGNAGMFGDGGNGGFSFFDGNGGDGGTGGTLIGNGGDGGNSVQTDGFLRGHGGDG Sbjct 203 SDGGTGGNAGMFGDGGNGGFSFFDGNGGDGGTGGTLIGNGGDGGNSVQTDGFLRGHGGDG 262 Query 377 GNAVGLIGNGGAGGAGSAGTGVFAPGGGSGGNGGNGALLVGNGGAGGSGGPTQIPSVAVP 436 GNAVGLIGNGGAGGAGSAGTGVFAPGGGSGGNGGNGALLVGNGGAGGSGGPTQIPSVAVP Sbjct 263 GNAVGLIGNGGAGGAGSAGTGVFAPGGGSGGNGGNGALLVGNGGAGGSGGPTQIPSVAVP 322 Query 437 VTGAGGTGGNGGTAGLIGNGGNGGAAGVSGDGTPGTGGNGGYAQLIGDGGDGGPGDSGGP 496 VTGAGGTGGNGGTAGLIGNGGNGGAAGVSGDGTPGTGGNGGYAQLIGDGGDGGPGDSGGP Sbjct 323 VTGAGGTGGNGGTAGLIGNGGNGGAAGVSGDGTPGTGGNGGYAQLIGDGGDGGPGDSGGP 382 Query 497 GGSGGTGGTLAGQNGSPGG 515 GGSGGTGGTLAGQNGSPGG Sbjct 383 GGSGGTGGTLAGQNGSPGG 401 >gi|183982114|ref|YP_001850405.1| PE-PGRS family protein [Mycobacterium marinum M] gi|183175440|gb|ACC40550.1| PE-PGRS family protein [Mycobacterium marinum M] Length=1397 Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 77/121 (64%), Positives = 91/121 (76%), Gaps = 2/121 (1%) Query 1 MSFVVAAPEVVVAAASDLAGIGSAIGAANAAAAVPTMGVLAAGADEVSAAVADLFGAHAQ 60 MSFV PE+VVAAASDL+GI SAI AN+ AA T VL A ADEVSAA+A LFG HAQ Sbjct 1 MSFVSVTPEMVVAAASDLSGINSAIAQANSVAAAATTTVLPAAADEVSAAIAALFGTHAQ 60 Query 61 AYQALSAQAALFHEQFVHAMTAGAGAYAGAEAADAAA--LDVLNGPFQALFGRPLIGDGA 118 YQA+SA+ A FH++FV ++ GAG+Y AEAA+A L ++N P QALFGRPLIGDGA Sbjct 61 QYQAISAELAAFHDRFVQSLNTGAGSYLRAEAANAEQGLLGLVNAPTQALFGRPLIGDGA 120 Query 119 N 119 N Sbjct 121 N 121 >gi|183985012|ref|YP_001853303.1| PE-PGRS family protein [Mycobacterium marinum M] gi|183178338|gb|ACC43448.1| PE-PGRS family protein [Mycobacterium marinum M] Length=1451 Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 80/126 (64%), Positives = 100/126 (80%), Gaps = 4/126 (3%) Query 1 MSFVVAAPEVVVAAASDLAGIGSAIGAANAAAAVPTMGVLAAGADEVSAAVADLFGAHAQ 60 MS+++AAPE++ +AA+DLAGI SA+ AAN +AAVPT +LAAGADEVSAA+A LFGAHAQ Sbjct 1 MSYLIAAPELMQSAAADLAGIESALSAANVSAAVPTTQILAAGADEVSAAIAALFGAHAQ 60 Query 61 AYQALSAQAALFHEQFVHAMTAGAGAYAGAEAADAAAL----DVLNGPFQALFGRPLIGD 116 AYQAL + FH++FV A+ +GA +YA AEAA A L D++N P QAL GRPLIG+ Sbjct 61 AYQALGSHVTAFHQEFVQALNSGAASYANAEAASIAPLQALYDLVNAPTQALLGRPLIGN 120 Query 117 GANGAP 122 GANGAP Sbjct 121 GANGAP 126 >gi|340626105|ref|YP_004744557.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059] gi|340004295|emb|CCC43436.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059] Length=856 Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 78/127 (62%), Positives = 91/127 (72%), Gaps = 8/127 (6%) Query 1 MSFVVAAPEVVVAAASDLAGIGSAIGAANAAAAVPTMGVLAAGADEVSAAVADLFGAHAQ 60 MSFV+AAPE +VA ASDLAGIGSA+ ANAA PT G+LAAGADEVS+A+A LFGAH Q Sbjct 1 MSFVIAAPEALVAVASDLAGIGSALAEANAAVLAPTTGLLAAGADEVSSAIAALFGAHGQ 60 Query 61 AYQALSAQAALFHEQFVH--------AMTAGAGAYAGAEAADAAALDVLNGPFQALFGRP 112 AYQ +SAQA+ FH QFV A A + A++ D LD++NGP QAL GRP Sbjct 61 AYQTVSAQASAFHAQFVQALTGGGGAYAAAEAANVSAAQSVDQRLLDLINGPTQALLGRP 120 Query 113 LIGDGAN 119 LIGDGAN Sbjct 121 LIGDGAN 127 >gi|148824595|ref|YP_001289349.1| PE-PGRS family protein [Mycobacterium tuberculosis F11] gi|148723122|gb|ABR07747.1| PE-PGRS family protein [Mycobacterium tuberculosis F11] Length=731 Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 82/129 (64%), Positives = 97/129 (76%), Gaps = 2/129 (1%) Query 1 MSFVVAAPEVVVAAASDLAGIGSAIGAANAAAAVPTMGVLAAGADEVSAAVADLFGAHAQ 60 MSFV+A PE++ AAA+DLAGI SAI AA AAAA PT+ V AAGADEVS A++ LFG HAQ Sbjct 1 MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ 60 Query 61 AYQALSAQAALFHEQFVHAMTAGAGAYAGAEA--ADAAALDVLNGPFQALFGRPLIGDGA 118 AYQALSAQA +FH+QFV A+T+G YA AE+ + L+ +N P Q LFGRPLIGDGA Sbjct 61 AYQALSAQATIFHDQFVQALTSGGNLYAAAESHTVEQMVLNAINAPTQTLFGRPLIGDGA 120 Query 119 NGAPGQPGG 127 NG P G Sbjct 121 NGTAENPDG 129 >gi|148663252|ref|YP_001284775.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra] gi|148507404|gb|ABQ75213.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra] Length=582 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 82/129 (64%), Positives = 97/129 (76%), Gaps = 2/129 (1%) Query 1 MSFVVAAPEVVVAAASDLAGIGSAIGAANAAAAVPTMGVLAAGADEVSAAVADLFGAHAQ 60 MSFV+A PE++ AAA+DLAGI SAI AA AAAA PT+ V AAGADEVS A++ LFG HAQ Sbjct 1 MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ 60 Query 61 AYQALSAQAALFHEQFVHAMTAGAGAYAGAEA--ADAAALDVLNGPFQALFGRPLIGDGA 118 AYQALSAQA +FH+QFV A+T+G YA AE+ + L+ +N P Q LFGRPLIGDGA Sbjct 61 AYQALSAQATIFHDQFVQALTSGGNLYAAAESHTVEQMVLNAINAPTQTLFGRPLIGDGA 120 Query 119 NGAPGQPGG 127 NG P G Sbjct 121 NGTAENPDG 129 >gi|15842981|ref|NP_338018.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551] gi|13883320|gb|AAK47832.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551] Length=775 Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 82/129 (64%), Positives = 97/129 (76%), Gaps = 2/129 (1%) Query 1 MSFVVAAPEVVVAAASDLAGIGSAIGAANAAAAVPTMGVLAAGADEVSAAVADLFGAHAQ 60 MSFV+A PE++ AAA+DLAGI SAI AA AAAA PT+ V AAGADEVS A++ LFG HAQ Sbjct 45 MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ 104 Query 61 AYQALSAQAALFHEQFVHAMTAGAGAYAGAEA--ADAAALDVLNGPFQALFGRPLIGDGA 118 AYQALSAQA +FH+QFV A+T+G YA AE+ + L+ +N P Q LFGRPLIGDGA Sbjct 105 AYQALSAQATIFHDQFVQALTSGGNLYAAAESHTVEQMVLNAINAPTQTLFGRPLIGDGA 164 Query 119 NGAPGQPGG 127 NG P G Sbjct 165 NGTAENPDG 173 >gi|341603337|emb|CCC66018.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Moreau RDJ] Length=750 Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 82/129 (64%), Positives = 97/129 (76%), Gaps = 2/129 (1%) Query 1 MSFVVAAPEVVVAAASDLAGIGSAIGAANAAAAVPTMGVLAAGADEVSAAVADLFGAHAQ 60 MSFV+A PE++ AAA+DLAGI SAI AA AAAA PT+ V AAGADEVS A++ LFG HAQ Sbjct 1 MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ 60 Query 61 AYQALSAQAALFHEQFVHAMTAGAGAYAGAEA--ADAAALDVLNGPFQALFGRPLIGDGA 118 AYQALSAQA +FH+QFV A+T+G YA AE+ + L+ +N P Q LFGRPLIGDGA Sbjct 61 AYQALSAQATIFHDQFVQALTSGGNLYAAAESHTVEQMVLNAINAPTQTLFGRPLIGDGA 120 Query 119 NGAPGQPGG 127 NG P G Sbjct 121 NGTAENPDG 129 >gi|121639312|ref|YP_979536.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224991809|ref|YP_002646498.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172] gi|121494960|emb|CAL73446.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224774924|dbj|BAH27730.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172] Length=750 Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 82/129 (64%), Positives = 97/129 (76%), Gaps = 2/129 (1%) Query 1 MSFVVAAPEVVVAAASDLAGIGSAIGAANAAAAVPTMGVLAAGADEVSAAVADLFGAHAQ 60 MSFV+A PE++ AAA+DLAGI SAI AA AAAA PT+ V AAGADEVS A++ LFG HAQ Sbjct 1 MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ 60 Query 61 AYQALSAQAALFHEQFVHAMTAGAGAYAGAEA--ADAAALDVLNGPFQALFGRPLIGDGA 118 AYQALSAQA +FH+QFV A+T+G YA AE+ + L+ +N P Q LFGRPLIGDGA Sbjct 61 AYQALSAQATIFHDQFVQALTSGGNLYAAAESHTVEQMVLNAINAPTQTLFGRPLIGDGA 120 Query 119 NGAPGQPGG 127 NG P G Sbjct 121 NGTAENPDG 129 >gi|31794568|ref|NP_857061.1| PE-PGRS family protein [Mycobacterium bovis AF2122/97] gi|31620165|emb|CAD95608.1| PE-PGRS FAMILY PROTEIN [Mycobacterium bovis AF2122/97] Length=749 Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 82/129 (64%), Positives = 97/129 (76%), Gaps = 2/129 (1%) Query 1 MSFVVAAPEVVVAAASDLAGIGSAIGAANAAAAVPTMGVLAAGADEVSAAVADLFGAHAQ 60 MSFV+A PE++ AAA+DLAGI SAI AA AAAA PT+ V AAGADEVS A++ LFG HAQ Sbjct 1 MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ 60 Query 61 AYQALSAQAALFHEQFVHAMTAGAGAYAGAEA--ADAAALDVLNGPFQALFGRPLIGDGA 118 AYQALSAQA +FH+QFV A+T+G YA AE+ + L+ +N P Q LFGRPLIGDGA Sbjct 61 AYQALSAQATIFHDQFVQALTSGGNLYAAAESHTVEQMVLNAINAPTQTLFGRPLIGDGA 120 Query 119 NGAPGQPGG 127 NG P G Sbjct 121 NGTAENPDG 129 >gi|31793030|ref|NP_855523.1| PE-PGRS family protein [Mycobacterium bovis AF2122/97] gi|31618621|emb|CAD94574.1| PE-PGRS FAMILY PROTEIN [Mycobacterium bovis AF2122/97] Length=466 Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 258/258 (100%), Positives = 258/258 (100%), Gaps = 0/258 (0%) Query 258 VPSGAADGGAGGDARLIGNGGDGGSVGAAPTGIGNGGNGGNGGWLYGDGGSGGSTLQGFS 317 VPSGAADGGAGGDARLIGNGGDGGSVGAAPTGIGNGGNGGNGGWLYGDGGSGGSTLQGFS Sbjct 209 VPSGAADGGAGGDARLIGNGGDGGSVGAAPTGIGNGGNGGNGGWLYGDGGSGGSTLQGFS 268 Query 318 DGGTGGNAGMFGDGGNGGFSFFDGNGGDGGTGGTLIGNGGDGGNSVQTDGFLRGHGGDGG 377 DGGTGGNAGMFGDGGNGGFSFFDGNGGDGGTGGTLIGNGGDGGNSVQTDGFLRGHGGDGG Sbjct 269 DGGTGGNAGMFGDGGNGGFSFFDGNGGDGGTGGTLIGNGGDGGNSVQTDGFLRGHGGDGG 328 Query 378 NAVGLIGNGGAGGAGSAGTGVFAPGGGSGGNGGNGALLVGNGGAGGSGGPTQIPSVAVPV 437 NAVGLIGNGGAGGAGSAGTGVFAPGGGSGGNGGNGALLVGNGGAGGSGGPTQIPSVAVPV Sbjct 329 NAVGLIGNGGAGGAGSAGTGVFAPGGGSGGNGGNGALLVGNGGAGGSGGPTQIPSVAVPV 388 Query 438 TGAGGTGGNGGTAGLIGNGGNGGAAGVSGDGTPGTGGNGGYAQLIGDGGDGGPGDSGGPG 497 TGAGGTGGNGGTAGLIGNGGNGGAAGVSGDGTPGTGGNGGYAQLIGDGGDGGPGDSGGPG Sbjct 389 TGAGGTGGNGGTAGLIGNGGNGGAAGVSGDGTPGTGGNGGYAQLIGDGGDGGPGDSGGPG 448 Query 498 GSGGTGGTLAGQNGSPGG 515 GSGGTGGTLAGQNGSPGG Sbjct 449 GSGGTGGTLAGQNGSPGG 466 >gi|57117101|ref|YP_177968.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Rv] gi|253800434|ref|YP_003033435.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 1435] gi|7441235|pir||C70974 hypothetical glycine-rich protein Rv3388 - Mycobacterium tuberculosis (strain H37RV) gi|38490366|emb|CAE55593.1| PE-PGRS FAMILY PROTEIN [Mycobacterium tuberculosis H37Rv] gi|253321937|gb|ACT26540.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 1435] gi|328460166|gb|AEB05589.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 4207] gi|344221227|gb|AEN01858.1| PE-PGRS family protein [Mycobacterium tuberculosis CTRI-2] Length=731 Score = 134 bits (337), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 82/129 (64%), Positives = 97/129 (76%), Gaps = 2/129 (1%) Query 1 MSFVVAAPEVVVAAASDLAGIGSAIGAANAAAAVPTMGVLAAGADEVSAAVADLFGAHAQ 60 MSFV+A PE++ AAA+DLAGI SAI AA AAAA PT+ V AAGADEVS A++ LFG HAQ Sbjct 1 MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ 60 Query 61 AYQALSAQAALFHEQFVHAMTAGAGAYAGAEA--ADAAALDVLNGPFQALFGRPLIGDGA 118 AYQALSAQA +FH+QFV A+T+G YA AE+ + L+ +N P Q LFGRPLIGDGA Sbjct 61 AYQALSAQATIFHDQFVQALTSGGNLYAAAESHTVEQMVLNAINAPTQTLFGRPLIGDGA 120 Query 119 NGAPGQPGG 127 NG P G Sbjct 121 NGTAENPDG 129 >gi|339296212|gb|AEJ48323.1| hypothetical protein CCDC5079_3134 [Mycobacterium tuberculosis CCDC5079] Length=731 Score = 134 bits (336), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 82/129 (64%), Positives = 97/129 (76%), Gaps = 2/129 (1%) Query 1 MSFVVAAPEVVVAAASDLAGIGSAIGAANAAAAVPTMGVLAAGADEVSAAVADLFGAHAQ 60 MSFV+A PE++ AAA+DLAGI SAI AA AAAA PT+ V AAGADEVS A++ LFG HAQ Sbjct 1 MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ 60 Query 61 AYQALSAQAALFHEQFVHAMTAGAGAYAGAEA--ADAAALDVLNGPFQALFGRPLIGDGA 118 AYQALSAQA +FH+QFV A+T+G YA AE+ + L+ +N P Q LFGRPLIGDGA Sbjct 61 AYQALSAQATIFHDQFVQALTSGGNLYAAAESHTVEQMVLNAINAPTQTLFGRPLIGDGA 120 Query 119 NGAPGQPGG 127 NG P G Sbjct 121 NGTAENPDG 129 >gi|339633393|ref|YP_004725035.1| PE-PGRS family protein [Mycobacterium africanum GM041182] gi|339332749|emb|CCC28470.1| PE-PGRS family protein [Mycobacterium africanum GM041182] Length=724 Score = 133 bits (335), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 82/129 (64%), Positives = 97/129 (76%), Gaps = 2/129 (1%) Query 1 MSFVVAAPEVVVAAASDLAGIGSAIGAANAAAAVPTMGVLAAGADEVSAAVADLFGAHAQ 60 MSFV+A PE++ AAA+DLAGI SAI AA AAAA PT+ V AAGADEVS A++ LFG HAQ Sbjct 1 MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ 60 Query 61 AYQALSAQAALFHEQFVHAMTAGAGAYAGAEA--ADAAALDVLNGPFQALFGRPLIGDGA 118 AYQALSAQA +FH+QFV A+T+G YA AE+ + L+ +N P Q LFGRPLIGDGA Sbjct 61 AYQALSAQATIFHDQFVQALTSGGNLYAAAESHTVEQMVLNAINAPTQTLFGRPLIGDGA 120 Query 119 NGAPGQPGG 127 NG P G Sbjct 121 NGTAENPDG 129 >gi|183980330|ref|YP_001848621.1| PE-PGRS family protein, PE_PGRS1 [Mycobacterium marinum M] gi|183173656|gb|ACC38766.1| PE-PGRS family protein, PE_PGRS1 [Mycobacterium marinum M] Length=557 Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 83/133 (63%), Positives = 100/133 (76%), Gaps = 11/133 (8%) Query 1 MSFVVAAPEVVVAAASDLAGIGSAIGAANAAAAVPTMGVLAAGADEVSAAVADLFGAHAQ 60 MS+V A PE+V AAA+DLAG+ S + AAN+AAA PTM V+AAGADEVSA +A LF AHAQ Sbjct 1 MSYVFATPELVAAAATDLAGVQSVLSAANSAAAGPTMAVMAAGADEVSALIAGLFDAHAQ 60 Query 61 AYQALSAQAALFHEQFVHAMTAGAGAYAGAEAADAAALDV-----------LNGPFQALF 109 AYQALSAQA +FH+QFV + AGA +YA AEAA+A+ L V +N P QA+ Sbjct 61 AYQALSAQALVFHDQFVQMLNAGASSYAAAEAANASPLQVVQNLGQNVLAAVNAPTQAVL 120 Query 110 GRPLIGDGANGAP 122 GRPLIGDGANG+P Sbjct 121 GRPLIGDGANGSP 133 >gi|339298403|gb|AEJ50513.1| PE-PGRS family protein [Mycobacterium tuberculosis CCDC5180] Length=536 Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 226/226 (100%), Positives = 226/226 (100%), Gaps = 0/226 (0%) Query 257 NVPSGAADGGAGGDARLIGNGGDGGSVGAAPTGIGNGGNGGNGGWLYGDGGSGGSTLQGF 316 NVPSGAADGGAGGDARLIGNGGDGGSVGAAPTGIGNGGNGGNGGWLYGDGGSGGSTLQGF Sbjct 257 NVPSGAADGGAGGDARLIGNGGDGGSVGAAPTGIGNGGNGGNGGWLYGDGGSGGSTLQGF 316 Query 317 SDGGTGGNAGMFGDGGNGGFSFFDGNGGDGGTGGTLIGNGGDGGNSVQTDGFLRGHGGDG 376 SDGGTGGNAGMFGDGGNGGFSFFDGNGGDGGTGGTLIGNGGDGGNSVQTDGFLRGHGGDG Sbjct 317 SDGGTGGNAGMFGDGGNGGFSFFDGNGGDGGTGGTLIGNGGDGGNSVQTDGFLRGHGGDG 376 Query 377 GNAVGLIGNGGAGGAGSAGTGVFAPGGGSGGNGGNGALLVGNGGAGGSGGPTQIPSVAVP 436 GNAVGLIGNGGAGGAGSAGTGVFAPGGGSGGNGGNGALLVGNGGAGGSGGPTQIPSVAVP Sbjct 377 GNAVGLIGNGGAGGAGSAGTGVFAPGGGSGGNGGNGALLVGNGGAGGSGGPTQIPSVAVP 436 Query 437 VTGAGGTGGNGGTAGLIGNGGNGGAAGVSGDGTPGTGGNGGYAQLI 482 VTGAGGTGGNGGTAGLIGNGGNGGAAGVSGDGTPGTGGNGGYAQLI Sbjct 437 VTGAGGTGGNGGTAGLIGNGGNGGAAGVSGDGTPGTGGNGGYAQLI 482 >gi|339294775|gb|AEJ46886.1| hypothetical protein CCDC5079_1696 [Mycobacterium tuberculosis CCDC5079] Length=353 Score = 130 bits (327), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 258/259 (99%), Positives = 258/259 (99%), Gaps = 0/259 (0%) Query 257 NVPSGAADGGAGGDARLIGNGGDGGSVGAAPTGIGNGGNGGNGGWLYGDGGSGGSTLQGF 316 NVP GAADGGAGGDARLIGNGGDGGSVGAAPTGIGNGGNGGNGGWLYGDGGSGGSTLQGF Sbjct 95 NVPPGAADGGAGGDARLIGNGGDGGSVGAAPTGIGNGGNGGNGGWLYGDGGSGGSTLQGF 154 Query 317 SDGGTGGNAGMFGDGGNGGFSFFDGNGGDGGTGGTLIGNGGDGGNSVQTDGFLRGHGGDG 376 SDGGTGGNAGMFGDGGNGGFSFFDGNGGDGGTGGTLIGNGGDGGNSVQTDGFLRGHGGDG Sbjct 155 SDGGTGGNAGMFGDGGNGGFSFFDGNGGDGGTGGTLIGNGGDGGNSVQTDGFLRGHGGDG 214 Query 377 GNAVGLIGNGGAGGAGSAGTGVFAPGGGSGGNGGNGALLVGNGGAGGSGGPTQIPSVAVP 436 GNAVGLIGNGGAGGAGSAGTGVFAPGGGSGGNGGNGALLVGNGGAGGSGGPTQIPSVAVP Sbjct 215 GNAVGLIGNGGAGGAGSAGTGVFAPGGGSGGNGGNGALLVGNGGAGGSGGPTQIPSVAVP 274 Query 437 VTGAGGTGGNGGTAGLIGNGGNGGAAGVSGDGTPGTGGNGGYAQLIGDGGDGGPGDSGGP 496 VTGAGGTGGNGGTAGLIGNGGNGGAAGVSGDGTPGTGGNGGYAQLIGDGGDGGPGDSGGP Sbjct 275 VTGAGGTGGNGGTAGLIGNGGNGGAAGVSGDGTPGTGGNGGYAQLIGDGGDGGPGDSGGP 334 Query 497 GGSGGTGGTLAGQNGSPGG 515 GGSGGTGGTLAGQNGSPGG Sbjct 335 GGSGGTGGTLAGQNGSPGG 353 >gi|289574445|ref|ZP_06454672.1| predicted protein [Mycobacterium tuberculosis K85] gi|289538876|gb|EFD43454.1| predicted protein [Mycobacterium tuberculosis K85] Length=524 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 84/127 (67%), Positives = 101/127 (80%), Gaps = 5/127 (3%) Query 1 MSFVVAAPEVVVAAASDLAGIGSAIGAANAAAAVPTMGVLAAGADEVSAAVADLFGAHAQ 60 MS++V PE+V AAA+DLA IGS+I AANAAAA PT ++AAG DEVSAA+A LFGAHA+ Sbjct 1 MSYLVVVPELVAAAATDLANIGSSISAANAAAAAPTTALVAAGGDEVSAAIAALFGAHAR 60 Query 61 AYQALSAQAALFHEQFVHAMTAGAGAYAGAEAADAAA-----LDVLNGPFQALFGRPLIG 115 AYQALSAQAA+FHEQFV A+ AG +YA AEAA A + L+++N P QAL GRPLIG Sbjct 61 AYQALSAQAAMFHEQFVRALAAGGNSYAVAEAATAQSVQQDLLNLINAPTQALLGRPLIG 120 Query 116 DGANGAP 122 +GANG P Sbjct 121 NGANGLP 127 >gi|289569833|ref|ZP_06450060.1| PE-PGRS family protein [Mycobacterium tuberculosis T17] gi|340626780|ref|YP_004745232.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059] gi|289543587|gb|EFD47235.1| PE-PGRS family protein [Mycobacterium tuberculosis T17] gi|340004970|emb|CCC44118.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059] Length=624 Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 84/127 (67%), Positives = 101/127 (80%), Gaps = 5/127 (3%) Query 1 MSFVVAAPEVVVAAASDLAGIGSAIGAANAAAAVPTMGVLAAGADEVSAAVADLFGAHAQ 60 MS++V PE+V AAA+DLA IGS+I AANAAAA PT ++AAG DEVSAA+A LFGAHA+ Sbjct 1 MSYLVVVPELVAAAATDLANIGSSISAANAAAAAPTTALVAAGGDEVSAAIAALFGAHAR 60 Query 61 AYQALSAQAALFHEQFVHAMTAGAGAYAGAEAADAAA-----LDVLNGPFQALFGRPLIG 115 AYQALSAQAA+FHEQFV A+ AG +YA AEAA A + L+++N P QAL GRPLIG Sbjct 61 AYQALSAQAAMFHEQFVRALAAGGNSYAVAEAATAQSVQQDLLNLINAPTQALLGRPLIG 120 Query 116 DGANGAP 122 +GANG P Sbjct 121 NGANGLP 127 >gi|339631822|ref|YP_004723464.1| PE-PGRS family protein [Mycobacterium africanum GM041182] gi|339331178|emb|CCC26860.1| PE-PGRS family protein [Mycobacterium africanum GM041182] Length=632 Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 84/127 (67%), Positives = 101/127 (80%), Gaps = 5/127 (3%) Query 1 MSFVVAAPEVVVAAASDLAGIGSAIGAANAAAAVPTMGVLAAGADEVSAAVADLFGAHAQ 60 MS++V PE+V AAA+DLA IGS+I AANAAAA PT ++AAG DEVSAA+A LFGAHA+ Sbjct 1 MSYLVVVPELVAAAATDLANIGSSISAANAAAAAPTTALVAAGGDEVSAAIAALFGAHAR 60 Query 61 AYQALSAQAALFHEQFVHAMTAGAGAYAGAEAADAAA-----LDVLNGPFQALFGRPLIG 115 AYQALSAQAA+FHEQFV A+ AG +YA AEAA A + L+++N P QAL GRPLIG Sbjct 61 AYQALSAQAAMFHEQFVRALAAGGNSYAVAEAATAQSVQQDLLNLINAPTQALLGRPLIG 120 Query 116 DGANGAP 122 +GANG P Sbjct 121 NGANGLP 127 >gi|57116908|ref|YP_177832.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Rv] gi|148661576|ref|YP_001283099.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra] gi|148822983|ref|YP_001287737.1| PE-PGRS family protein [Mycobacterium tuberculosis F11] 19 more sequence titles Length=618 Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 84/127 (67%), Positives = 101/127 (80%), Gaps = 5/127 (3%) Query 1 MSFVVAAPEVVVAAASDLAGIGSAIGAANAAAAVPTMGVLAAGADEVSAAVADLFGAHAQ 60 MS++V PE+V AAA+DLA IGS+I AANAAAA PT ++AAG DEVSAA+A LFGAHA+ Sbjct 1 MSYLVVVPELVAAAATDLANIGSSISAANAAAAAPTTALVAAGGDEVSAAIAALFGAHAR 60 Query 61 AYQALSAQAALFHEQFVHAMTAGAGAYAGAEAADAAA-----LDVLNGPFQALFGRPLIG 115 AYQALSAQAA+FHEQFV A+ AG +YA AEAA A + L+++N P QAL GRPLIG Sbjct 61 AYQALSAQAAMFHEQFVRALAAGGNSYAVAEAATAQSVQQDLLNLINAPTQALLGRPLIG 120 Query 116 DGANGAP 122 +GANG P Sbjct 121 NGANGLP 127 >gi|31792957|ref|NP_855450.1| PE-PGRS family protein [Mycobacterium bovis AF2122/97] gi|224990154|ref|YP_002644841.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172] gi|31618548|emb|CAD94500.1| PE-PGRS FAMILY PROTEIN [Mycobacterium bovis AF2122/97] gi|224773267|dbj|BAH26073.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172] gi|341601697|emb|CCC64370.1| PE-PGRS FAMILY PROTEIN [Mycobacterium bovis BCG str. Moreau RDJ] Length=624 Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 84/127 (67%), Positives = 101/127 (80%), Gaps = 5/127 (3%) Query 1 MSFVVAAPEVVVAAASDLAGIGSAIGAANAAAAVPTMGVLAAGADEVSAAVADLFGAHAQ 60 MS++V PE+V AAA+DLA IGS+I AANAAAA PT ++AAG DEVSAA+A LFGAHA+ Sbjct 1 MSYLVVVPELVAAAATDLANIGSSISAANAAAAAPTTALVAAGGDEVSAAIAALFGAHAR 60 Query 61 AYQALSAQAALFHEQFVHAMTAGAGAYAGAEAADAAA-----LDVLNGPFQALFGRPLIG 115 AYQALSAQAA+FHEQFV A+ AG +YA AEAA A + L+++N P QAL GRPLIG Sbjct 61 AYQALSAQAAMFHEQFVRALAAGGNSYAVAEAATAQSVQQDLLNLINAPTQALLGRPLIG 120 Query 116 DGANGAP 122 +GANG P Sbjct 121 NGANGLP 127 >gi|289447383|ref|ZP_06437127.1| PE-PGRS family protein [Mycobacterium tuberculosis CPHL_A] gi|289420341|gb|EFD17542.1| PE-PGRS family protein [Mycobacterium tuberculosis CPHL_A] Length=592 Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 84/127 (67%), Positives = 101/127 (80%), Gaps = 5/127 (3%) Query 1 MSFVVAAPEVVVAAASDLAGIGSAIGAANAAAAVPTMGVLAAGADEVSAAVADLFGAHAQ 60 MS++V PE+V AAA+DLA IGS+I AANAAAA PT ++AAG DEVSAA+A LFGAHA+ Sbjct 1 MSYLVVVPELVAAAATDLANIGSSISAANAAAAAPTTALVAAGGDEVSAAIAALFGAHAR 60 Query 61 AYQALSAQAALFHEQFVHAMTAGAGAYAGAEAADAAA-----LDVLNGPFQALFGRPLIG 115 AYQALSAQAA+FHEQFV A+ AG +YA AEAA A + L+++N P QAL GRPLIG Sbjct 61 AYQALSAQAAMFHEQFVRALAAGGNSYAVAEAATAQSVQQDLLNLINAPTQALLGRPLIG 120 Query 116 DGANGAP 122 +GANG P Sbjct 121 NGANGLP 127 >gi|294996728|ref|ZP_06802419.1| PE-PGRS family protein [Mycobacterium tuberculosis 210] Length=501 Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 94/126 (75%), Positives = 101/126 (81%), Gaps = 4/126 (3%) Query 1 MSFVVAAPEVVVAAASDLAGIGSAIGAANAAAAVPTMGVLAAGADEVSAAVADLFGAHAQ 60 MSFVV PE + A A+DLAGIGS IG ANAAAAVPT VLAA ADEVSAA+A LF HAQ Sbjct 1 MSFVVTIPEALAAVATDLAGIGSTIGTANAAAAVPTTTVLAAAADEVSAAMAALFSGHAQ 60 Query 61 AYQALSAQAALFHEQFVHAMTAGAGAYAGAEAADAA----ALDVLNGPFQALFGRPLIGD 116 AYQALSAQAALFHEQFV A+TAGAG+YA AEAA AA LDV+N P AL GRPLIG+ Sbjct 61 AYQALSAQAALFHEQFVRALTAGAGSYAAAEAASAAPLEGVLDVINAPALALLGRPLIGN 120 Query 117 GANGAP 122 GANGAP Sbjct 121 GANGAP 126 >gi|51832320|gb|AAU10330.1| PE_PGRS 33 [Mycobacterium tuberculosis] Length=501 Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 94/126 (75%), Positives = 101/126 (81%), Gaps = 4/126 (3%) Query 1 MSFVVAAPEVVVAAASDLAGIGSAIGAANAAAAVPTMGVLAAGADEVSAAVADLFGAHAQ 60 MSFVV PE + A A+DLAGIGS IG ANAAAAVPT VLAA ADEVSAA+A LF HAQ Sbjct 1 MSFVVTIPEALAAVATDLAGIGSTIGTANAAAAVPTTTVLAAAADEVSAAMAALFSGHAQ 60 Query 61 AYQALSAQAALFHEQFVHAMTAGAGAYAGAEAADAA----ALDVLNGPFQALFGRPLIGD 116 AYQALSAQAALFHEQFV A+TAGAG+YA AEAA AA LDV+N P AL GRPLIG+ Sbjct 61 AYQALSAQAALFHEQFVRALTAGAGSYAAAEAASAAPLEGVLDVINAPALALLGRPLIGN 120 Query 117 GANGAP 122 GANGAP Sbjct 121 GANGAP 126 >gi|31793008|ref|NP_855501.1| PE-PGRS family protein [Mycobacterium bovis AF2122/97] gi|121637721|ref|YP_977944.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224990205|ref|YP_002644892.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172] 6 more sequence titles Length=501 Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 94/126 (75%), Positives = 101/126 (81%), Gaps = 4/126 (3%) Query 1 MSFVVAAPEVVVAAASDLAGIGSAIGAANAAAAVPTMGVLAAGADEVSAAVADLFGAHAQ 60 MSFVV PE + A A+DLAGIGS IG ANAAAAVPT VLAA ADEVSAA+A LF HAQ Sbjct 1 MSFVVTIPEALAAVATDLAGIGSTIGTANAAAAVPTTTVLAAAADEVSAAMAALFSGHAQ 60 Query 61 AYQALSAQAALFHEQFVHAMTAGAGAYAGAEAADAA----ALDVLNGPFQALFGRPLIGD 116 AYQALSAQAALFHEQFV A+TAGAG+YA AEAA AA LDV+N P AL GRPLIG+ Sbjct 61 AYQALSAQAALFHEQFVRALTAGAGSYAAAEAASAAPLEGVLDVINAPALALLGRPLIGN 120 Query 117 GANGAP 122 GANGAP Sbjct 121 GANGAP 126 >gi|254550849|ref|ZP_05141296.1| hypothetical protein Mtube_10381 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] Length=234 Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 187/187 (100%), Positives = 187/187 (100%), Gaps = 0/187 (0%) Query 258 VPSGAADGGAGGDARLIGNGGDGGSVGAAPTGIGNGGNGGNGGWLYGDGGSGGSTLQGFS 317 VPSGAADGGAGGDARLIGNGGDGGSVGAAPTGIGNGGNGGNGGWLYGDGGSGGSTLQGFS Sbjct 48 VPSGAADGGAGGDARLIGNGGDGGSVGAAPTGIGNGGNGGNGGWLYGDGGSGGSTLQGFS 107 Query 318 DGGTGGNAGMFGDGGNGGFSFFDGNGGDGGTGGTLIGNGGDGGNSVQTDGFLRGHGGDGG 377 DGGTGGNAGMFGDGGNGGFSFFDGNGGDGGTGGTLIGNGGDGGNSVQTDGFLRGHGGDGG Sbjct 108 DGGTGGNAGMFGDGGNGGFSFFDGNGGDGGTGGTLIGNGGDGGNSVQTDGFLRGHGGDGG 167 Query 378 NAVGLIGNGGAGGAGSAGTGVFAPGGGSGGNGGNGALLVGNGGAGGSGGPTQIPSVAVPV 437 NAVGLIGNGGAGGAGSAGTGVFAPGGGSGGNGGNGALLVGNGGAGGSGGPTQIPSVAVPV Sbjct 168 NAVGLIGNGGAGGAGSAGTGVFAPGGGSGGNGGNGALLVGNGGAGGSGGPTQIPSVAVPV 227 Query 438 TGAGGTG 444 TGAGGTG Sbjct 228 TGAGGTG 234 Lambda K H 0.309 0.143 0.440 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 1122945618116 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40