BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv1841c Length=345 Score E Sequences producing significant alignments: (Bits) Value gi|15608978|ref|NP_216357.1| hypothetical protein Rv1841c [Mycob... 674 0.0 gi|167970321|ref|ZP_02552598.1| hypothetical protein MtubH3_2076... 672 0.0 gi|15841309|ref|NP_336346.1| CBS domain-containing protein [Myco... 671 0.0 gi|31793031|ref|NP_855524.1| hypothetical protein Mb1872c [Mycob... 649 0.0 gi|289447455|ref|ZP_06437199.1| conserved membrane protein [Myco... 647 0.0 gi|289443317|ref|ZP_06433061.1| conserved membrane protein [Myco... 645 0.0 gi|340626849|ref|YP_004745301.1| hypothetical protein MCAN_18561... 644 0.0 gi|254232020|ref|ZP_04925347.1| conserved hypothetical membrane ... 635 2e-180 gi|289750414|ref|ZP_06509792.1| conserved membrane protein [Myco... 635 4e-180 gi|183982721|ref|YP_001851012.1| hypothetical protein MMAR_2715 ... 510 2e-142 gi|296164823|ref|ZP_06847382.1| CBS domain protein [Mycobacteriu... 508 8e-142 gi|41407648|ref|NP_960484.1| hypothetical protein MAP1550c [Myco... 501 7e-140 gi|342861259|ref|ZP_08717907.1| hypothetical protein MCOL_20346 ... 501 7e-140 gi|336457599|gb|EGO36604.1| CBS domain-containing protein [Mycob... 501 1e-139 gi|118462853|ref|YP_882065.1| CBS domain-containing protein [Myc... 499 2e-139 gi|120404074|ref|YP_953903.1| hypothetical protein Mvan_3095 [My... 485 4e-135 gi|240171761|ref|ZP_04750420.1| hypothetical membrane protein [M... 482 4e-134 gi|254820857|ref|ZP_05225858.1| hypothetical protein MintA_13065... 476 2e-132 gi|145223951|ref|YP_001134629.1| hypothetical protein Mflv_3365 ... 476 3e-132 gi|108799781|ref|YP_639978.1| hypothetical protein Mmcs_2815 [My... 474 1e-131 gi|333990571|ref|YP_004523185.1| hypothetical protein JDM601_193... 466 3e-129 gi|118471401|ref|YP_887941.1| CBS domain-containing protein [Myc... 457 1e-126 gi|169629496|ref|YP_001703145.1| hypothetical protein MAB_2410c ... 443 2e-122 gi|325674373|ref|ZP_08154062.1| CBS domain protein [Rhodococcus ... 392 4e-107 gi|312139819|ref|YP_004007155.1| integral membrane protein [Rhod... 392 6e-107 gi|111024191|ref|YP_707163.1| hypothetical protein RHA1_ro07241 ... 388 6e-106 gi|226366434|ref|YP_002784217.1| hypothetical protein ROP_70250 ... 387 2e-105 gi|343928472|ref|ZP_08767920.1| hypothetical protein GOALK_117_0... 384 1e-104 gi|54024481|ref|YP_118723.1| hypothetical protein nfa25120 [Noca... 380 2e-103 gi|226306583|ref|YP_002766543.1| hypothetical protein RER_30960 ... 379 4e-103 gi|296140021|ref|YP_003647264.1| hypothetical protein Tpau_2318 ... 376 3e-102 gi|333920795|ref|YP_004494376.1| hypothetical protein AS9A_3131 ... 369 4e-100 gi|262202668|ref|YP_003273876.1| hypothetical protein Gbro_2765 ... 366 3e-99 gi|13539567|emb|CAC35699.1| putative integral membrane protein [... 349 4e-94 gi|326384956|ref|ZP_08206630.1| hypothetical protein SCNU_18517 ... 338 6e-91 gi|300786851|ref|YP_003767142.1| CBS domain-containing protein [... 333 2e-89 gi|302527134|ref|ZP_07279476.1| CBS domain-containing protein [S... 333 3e-89 gi|339294776|gb|AEJ46887.1| conserved hypothetical membrane prot... 322 7e-86 gi|227542028|ref|ZP_03972077.1| HCC family HlyC/CorC transporter... 319 4e-85 gi|237785467|ref|YP_002906172.1| HlyC/CorC family transporter [C... 316 3e-84 gi|227488979|ref|ZP_03919295.1| HCC family HlyC/CorC transporter... 316 4e-84 gi|256379351|ref|YP_003103011.1| hypothetical protein Amir_5345 ... 315 6e-84 gi|334563435|ref|ZP_08516426.1| hypothetical protein CbovD2_0258... 310 2e-82 gi|331696976|ref|YP_004333215.1| hypothetical protein Psed_3166 ... 309 3e-82 gi|336325548|ref|YP_004605514.1| hypothetical protein CRES_0994 ... 309 3e-82 gi|260578686|ref|ZP_05846594.1| CBS domain protein [Corynebacter... 307 2e-81 gi|145295581|ref|YP_001138402.1| hypothetical protein cgR_1508 [... 307 2e-81 gi|257056255|ref|YP_003134087.1| CBS domain-containing protein [... 306 3e-81 gi|19552663|ref|NP_600665.1| CBS domain-containing protein [Cory... 304 1e-80 gi|337290679|ref|YP_004629700.1| hypothetical protein CULC22_010... 304 1e-80 >gi|15608978|ref|NP_216357.1| hypothetical protein Rv1841c [Mycobacterium tuberculosis H37Rv] gi|148661647|ref|YP_001283170.1| hypothetical protein MRA_1852 [Mycobacterium tuberculosis H37Ra] gi|148823052|ref|YP_001287806.1| hypothetical protein TBFG_11869 [Mycobacterium tuberculosis F11] 51 more sequence titles Length=345 Score = 674 bits (1740), Expect = 0.0, Method: Compositional matrix adjust. Identities = 345/345 (100%), Positives = 345/345 (100%), Gaps = 0/345 (0%) Query 1 MDVLSAVLLALLLIGANAFFVGAEFALISARRDRLEALAEQGKATAVTVIRAGEQLPAML 60 MDVLSAVLLALLLIGANAFFVGAEFALISARRDRLEALAEQGKATAVTVIRAGEQLPAML Sbjct 1 MDVLSAVLLALLLIGANAFFVGAEFALISARRDRLEALAEQGKATAVTVIRAGEQLPAML 60 Query 61 TGAQLGVTVSSILLGRVGEPAVVKLLQLSFGLSGVPPALLHTLSLAIVVALHVLLGEMVP 120 TGAQLGVTVSSILLGRVGEPAVVKLLQLSFGLSGVPPALLHTLSLAIVVALHVLLGEMVP Sbjct 61 TGAQLGVTVSSILLGRVGEPAVVKLLQLSFGLSGVPPALLHTLSLAIVVALHVLLGEMVP 120 Query 121 KNIALAGPERTAMLLVPPYLVYVRLARPFIAFYNNCANAILRLVGVQPKDELDIAVSTAE 180 KNIALAGPERTAMLLVPPYLVYVRLARPFIAFYNNCANAILRLVGVQPKDELDIAVSTAE Sbjct 121 KNIALAGPERTAMLLVPPYLVYVRLARPFIAFYNNCANAILRLVGVQPKDELDIAVSTAE 180 Query 181 LSEMIAESLSEGLLDHEEHTRLTRALRIRTRLVADVAVPLVNIRAVQVSAVGSGPTIGGV 240 LSEMIAESLSEGLLDHEEHTRLTRALRIRTRLVADVAVPLVNIRAVQVSAVGSGPTIGGV Sbjct 181 LSEMIAESLSEGLLDHEEHTRLTRALRIRTRLVADVAVPLVNIRAVQVSAVGSGPTIGGV 240 Query 241 EQALAQTGYSRFPVVDRGGRFIGYLHIKDVLTLGDNPQTVIDLAVVRPLPRVPQSLPLAD 300 EQALAQTGYSRFPVVDRGGRFIGYLHIKDVLTLGDNPQTVIDLAVVRPLPRVPQSLPLAD Sbjct 241 EQALAQTGYSRFPVVDRGGRFIGYLHIKDVLTLGDNPQTVIDLAVVRPLPRVPQSLPLAD 300 Query 301 ALSRMRRINSHLALVTADNGSVVGMVALEDVVEDLVGTMRDGTHR 345 ALSRMRRINSHLALVTADNGSVVGMVALEDVVEDLVGTMRDGTHR Sbjct 301 ALSRMRRINSHLALVTADNGSVVGMVALEDVVEDLVGTMRDGTHR 345 >gi|167970321|ref|ZP_02552598.1| hypothetical protein MtubH3_20763 [Mycobacterium tuberculosis H37Ra] Length=345 Score = 672 bits (1734), Expect = 0.0, Method: Compositional matrix adjust. Identities = 344/345 (99%), Positives = 345/345 (100%), Gaps = 0/345 (0%) Query 1 MDVLSAVLLALLLIGANAFFVGAEFALISARRDRLEALAEQGKATAVTVIRAGEQLPAML 60 MDVLSAVLLALLLIGA+AFFVGAEFALISARRDRLEALAEQGKATAVTVIRAGEQLPAML Sbjct 1 MDVLSAVLLALLLIGAHAFFVGAEFALISARRDRLEALAEQGKATAVTVIRAGEQLPAML 60 Query 61 TGAQLGVTVSSILLGRVGEPAVVKLLQLSFGLSGVPPALLHTLSLAIVVALHVLLGEMVP 120 TGAQLGVTVSSILLGRVGEPAVVKLLQLSFGLSGVPPALLHTLSLAIVVALHVLLGEMVP Sbjct 61 TGAQLGVTVSSILLGRVGEPAVVKLLQLSFGLSGVPPALLHTLSLAIVVALHVLLGEMVP 120 Query 121 KNIALAGPERTAMLLVPPYLVYVRLARPFIAFYNNCANAILRLVGVQPKDELDIAVSTAE 180 KNIALAGPERTAMLLVPPYLVYVRLARPFIAFYNNCANAILRLVGVQPKDELDIAVSTAE Sbjct 121 KNIALAGPERTAMLLVPPYLVYVRLARPFIAFYNNCANAILRLVGVQPKDELDIAVSTAE 180 Query 181 LSEMIAESLSEGLLDHEEHTRLTRALRIRTRLVADVAVPLVNIRAVQVSAVGSGPTIGGV 240 LSEMIAESLSEGLLDHEEHTRLTRALRIRTRLVADVAVPLVNIRAVQVSAVGSGPTIGGV Sbjct 181 LSEMIAESLSEGLLDHEEHTRLTRALRIRTRLVADVAVPLVNIRAVQVSAVGSGPTIGGV 240 Query 241 EQALAQTGYSRFPVVDRGGRFIGYLHIKDVLTLGDNPQTVIDLAVVRPLPRVPQSLPLAD 300 EQALAQTGYSRFPVVDRGGRFIGYLHIKDVLTLGDNPQTVIDLAVVRPLPRVPQSLPLAD Sbjct 241 EQALAQTGYSRFPVVDRGGRFIGYLHIKDVLTLGDNPQTVIDLAVVRPLPRVPQSLPLAD 300 Query 301 ALSRMRRINSHLALVTADNGSVVGMVALEDVVEDLVGTMRDGTHR 345 ALSRMRRINSHLALVTADNGSVVGMVALEDVVEDLVGTMRDGTHR Sbjct 301 ALSRMRRINSHLALVTADNGSVVGMVALEDVVEDLVGTMRDGTHR 345 >gi|15841309|ref|NP_336346.1| CBS domain-containing protein [Mycobacterium tuberculosis CDC1551] gi|13881540|gb|AAK46160.1| CBS domain protein [Mycobacterium tuberculosis CDC1551] gi|323719582|gb|EGB28705.1| membrane protein [Mycobacterium tuberculosis CDC1551A] Length=345 Score = 671 bits (1731), Expect = 0.0, Method: Compositional matrix adjust. Identities = 344/345 (99%), Positives = 344/345 (99%), Gaps = 0/345 (0%) Query 1 MDVLSAVLLALLLIGANAFFVGAEFALISARRDRLEALAEQGKATAVTVIRAGEQLPAML 60 MDVLSAVLLALLLIGANAFFVGAEFALISARRDRLEALAEQGKATAVTVIRAGEQLPAML Sbjct 1 MDVLSAVLLALLLIGANAFFVGAEFALISARRDRLEALAEQGKATAVTVIRAGEQLPAML 60 Query 61 TGAQLGVTVSSILLGRVGEPAVVKLLQLSFGLSGVPPALLHTLSLAIVVALHVLLGEMVP 120 TGAQLGVTVSSILLGRVGEPAVVKLLQLSFGLSGVPPALLHTLSLAIVVALHVLLGEMVP Sbjct 61 TGAQLGVTVSSILLGRVGEPAVVKLLQLSFGLSGVPPALLHTLSLAIVVALHVLLGEMVP 120 Query 121 KNIALAGPERTAMLLVPPYLVYVRLARPFIAFYNNCANAILRLVGVQPKDELDIAVSTAE 180 KNIALAGPERTAMLLVPPYLVYVRLARPFIA YNNCANAILRLVGVQPKDELDIAVSTAE Sbjct 121 KNIALAGPERTAMLLVPPYLVYVRLARPFIAVYNNCANAILRLVGVQPKDELDIAVSTAE 180 Query 181 LSEMIAESLSEGLLDHEEHTRLTRALRIRTRLVADVAVPLVNIRAVQVSAVGSGPTIGGV 240 LSEMIAESLSEGLLDHEEHTRLTRALRIRTRLVADVAVPLVNIRAVQVSAVGSGPTIGGV Sbjct 181 LSEMIAESLSEGLLDHEEHTRLTRALRIRTRLVADVAVPLVNIRAVQVSAVGSGPTIGGV 240 Query 241 EQALAQTGYSRFPVVDRGGRFIGYLHIKDVLTLGDNPQTVIDLAVVRPLPRVPQSLPLAD 300 EQALAQTGYSRFPVVDRGGRFIGYLHIKDVLTLGDNPQTVIDLAVVRPLPRVPQSLPLAD Sbjct 241 EQALAQTGYSRFPVVDRGGRFIGYLHIKDVLTLGDNPQTVIDLAVVRPLPRVPQSLPLAD 300 Query 301 ALSRMRRINSHLALVTADNGSVVGMVALEDVVEDLVGTMRDGTHR 345 ALSRMRRINSHLALVTADNGSVVGMVALEDVVEDLVGTMRDGTHR Sbjct 301 ALSRMRRINSHLALVTADNGSVVGMVALEDVVEDLVGTMRDGTHR 345 >gi|31793031|ref|NP_855524.1| hypothetical protein Mb1872c [Mycobacterium bovis AF2122/97] gi|121637744|ref|YP_977967.1| hypothetical protein BCG_1877c [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224990228|ref|YP_002644915.1| hypothetical membrane protein [Mycobacterium bovis BCG str. Tokyo 172] 8 more sequence titles Length=349 Score = 649 bits (1674), Expect = 0.0, Method: Compositional matrix adjust. Identities = 345/349 (99%), Positives = 345/349 (99%), Gaps = 4/349 (1%) Query 1 MDVLSAVLLALLLIGANAFFVGAEFALISARRDRLEALAEQGKATAVTVIRAGEQLPAML 60 MDVLSAVLLALLLIGANAFFVGAEFALISARRDRLEALAEQGKATAVTVIRAGEQLPAML Sbjct 1 MDVLSAVLLALLLIGANAFFVGAEFALISARRDRLEALAEQGKATAVTVIRAGEQLPAML 60 Query 61 TGAQLGVTVSSILLGRVGEPAVVKLLQLSFGLSGVPPALLHTLSLA----IVVALHVLLG 116 TGAQLGVTVSSILLGRVGEPAVVKLLQLSFGLSGVPPALLHTLSLA IVVALHVLLG Sbjct 61 TGAQLGVTVSSILLGRVGEPAVVKLLQLSFGLSGVPPALLHTLSLAVALAIVVALHVLLG 120 Query 117 EMVPKNIALAGPERTAMLLVPPYLVYVRLARPFIAFYNNCANAILRLVGVQPKDELDIAV 176 EMVPKNIALAGPERTAMLLVPPYLVYVRLARPFIAFYNNCANAILRLVGVQPKDELDIAV Sbjct 121 EMVPKNIALAGPERTAMLLVPPYLVYVRLARPFIAFYNNCANAILRLVGVQPKDELDIAV 180 Query 177 STAELSEMIAESLSEGLLDHEEHTRLTRALRIRTRLVADVAVPLVNIRAVQVSAVGSGPT 236 STAELSEMIAESLSEGLLDHEEHTRLTRALRIRTRLVADVAVPLVNIRAVQVSAVGSGPT Sbjct 181 STAELSEMIAESLSEGLLDHEEHTRLTRALRIRTRLVADVAVPLVNIRAVQVSAVGSGPT 240 Query 237 IGGVEQALAQTGYSRFPVVDRGGRFIGYLHIKDVLTLGDNPQTVIDLAVVRPLPRVPQSL 296 IGGVEQALAQTGYSRFPVVDRGGRFIGYLHIKDVLTLGDNPQTVIDLAVVRPLPRVPQSL Sbjct 241 IGGVEQALAQTGYSRFPVVDRGGRFIGYLHIKDVLTLGDNPQTVIDLAVVRPLPRVPQSL 300 Query 297 PLADALSRMRRINSHLALVTADNGSVVGMVALEDVVEDLVGTMRDGTHR 345 PLADALSRMRRINSHLALVTADNGSVVGMVALEDVVEDLVGTMRDGTHR Sbjct 301 PLADALSRMRRINSHLALVTADNGSVVGMVALEDVVEDLVGTMRDGTHR 349 >gi|289447455|ref|ZP_06437199.1| conserved membrane protein [Mycobacterium tuberculosis CPHL_A] gi|289420413|gb|EFD17614.1| conserved membrane protein [Mycobacterium tuberculosis CPHL_A] Length=349 Score = 647 bits (1668), Expect = 0.0, Method: Compositional matrix adjust. Identities = 344/349 (99%), Positives = 344/349 (99%), Gaps = 4/349 (1%) Query 1 MDVLSAVLLALLLIGANAFFVGAEFALISARRDRLEALAEQGKATAVTVIRAGEQLPAML 60 MDVLSAVLLALLLIGANAFFVGAEFALISARRDRLEALAEQGKATAVTVIRAGEQLPAML Sbjct 1 MDVLSAVLLALLLIGANAFFVGAEFALISARRDRLEALAEQGKATAVTVIRAGEQLPAML 60 Query 61 TGAQLGVTVSSILLGRVGEPAVVKLLQLSFGLSGVPPALLHTLSLA----IVVALHVLLG 116 TGAQLGVTVSSILLGRVGEPAVVKLLQLSFGLSGVPPALLHTLSLA IVVALHVLLG Sbjct 61 TGAQLGVTVSSILLGRVGEPAVVKLLQLSFGLSGVPPALLHTLSLAVALAIVVALHVLLG 120 Query 117 EMVPKNIALAGPERTAMLLVPPYLVYVRLARPFIAFYNNCANAILRLVGVQPKDELDIAV 176 E VPKNIALAGPERTAMLLVPPYLVYVRLARPFIAFYNNCANAILRLVGVQPKDELDIAV Sbjct 121 ETVPKNIALAGPERTAMLLVPPYLVYVRLARPFIAFYNNCANAILRLVGVQPKDELDIAV 180 Query 177 STAELSEMIAESLSEGLLDHEEHTRLTRALRIRTRLVADVAVPLVNIRAVQVSAVGSGPT 236 STAELSEMIAESLSEGLLDHEEHTRLTRALRIRTRLVADVAVPLVNIRAVQVSAVGSGPT Sbjct 181 STAELSEMIAESLSEGLLDHEEHTRLTRALRIRTRLVADVAVPLVNIRAVQVSAVGSGPT 240 Query 237 IGGVEQALAQTGYSRFPVVDRGGRFIGYLHIKDVLTLGDNPQTVIDLAVVRPLPRVPQSL 296 IGGVEQALAQTGYSRFPVVDRGGRFIGYLHIKDVLTLGDNPQTVIDLAVVRPLPRVPQSL Sbjct 241 IGGVEQALAQTGYSRFPVVDRGGRFIGYLHIKDVLTLGDNPQTVIDLAVVRPLPRVPQSL 300 Query 297 PLADALSRMRRINSHLALVTADNGSVVGMVALEDVVEDLVGTMRDGTHR 345 PLADALSRMRRINSHLALVTADNGSVVGMVALEDVVEDLVGTMRDGTHR Sbjct 301 PLADALSRMRRINSHLALVTADNGSVVGMVALEDVVEDLVGTMRDGTHR 349 >gi|289443317|ref|ZP_06433061.1| conserved membrane protein [Mycobacterium tuberculosis T46] gi|289569916|ref|ZP_06450143.1| conserved membrane protein [Mycobacterium tuberculosis T17] gi|289416236|gb|EFD13476.1| conserved membrane protein [Mycobacterium tuberculosis T46] gi|289543670|gb|EFD47318.1| conserved membrane protein [Mycobacterium tuberculosis T17] Length=349 Score = 645 bits (1663), Expect = 0.0, Method: Compositional matrix adjust. Identities = 344/349 (99%), Positives = 344/349 (99%), Gaps = 4/349 (1%) Query 1 MDVLSAVLLALLLIGANAFFVGAEFALISARRDRLEALAEQGKATAVTVIRAGEQLPAML 60 MDVLSAVLLALLLIGANAFFVGAEFALISARRDRLEALAEQGKATAVTVIRAGEQLPAML Sbjct 1 MDVLSAVLLALLLIGANAFFVGAEFALISARRDRLEALAEQGKATAVTVIRAGEQLPAML 60 Query 61 TGAQLGVTVSSILLGRVGEPAVVKLLQLSFGLSGVPPALLHTLSLA----IVVALHVLLG 116 TGAQLGVTVSSILLGRVGEPAVVKLLQLSFGLSGVPPALLHTLSLA IVVALHVLLG Sbjct 61 TGAQLGVTVSSILLGRVGEPAVVKLLQLSFGLSGVPPALLHTLSLAVALAIVVALHVLLG 120 Query 117 EMVPKNIALAGPERTAMLLVPPYLVYVRLARPFIAFYNNCANAILRLVGVQPKDELDIAV 176 EMVPKNIALAGPERTAMLLVP YLVYVRLARPFIAFYNNCANAILRLVGVQPKDELDIAV Sbjct 121 EMVPKNIALAGPERTAMLLVPLYLVYVRLARPFIAFYNNCANAILRLVGVQPKDELDIAV 180 Query 177 STAELSEMIAESLSEGLLDHEEHTRLTRALRIRTRLVADVAVPLVNIRAVQVSAVGSGPT 236 STAELSEMIAESLSEGLLDHEEHTRLTRALRIRTRLVADVAVPLVNIRAVQVSAVGSGPT Sbjct 181 STAELSEMIAESLSEGLLDHEEHTRLTRALRIRTRLVADVAVPLVNIRAVQVSAVGSGPT 240 Query 237 IGGVEQALAQTGYSRFPVVDRGGRFIGYLHIKDVLTLGDNPQTVIDLAVVRPLPRVPQSL 296 IGGVEQALAQTGYSRFPVVDRGGRFIGYLHIKDVLTLGDNPQTVIDLAVVRPLPRVPQSL Sbjct 241 IGGVEQALAQTGYSRFPVVDRGGRFIGYLHIKDVLTLGDNPQTVIDLAVVRPLPRVPQSL 300 Query 297 PLADALSRMRRINSHLALVTADNGSVVGMVALEDVVEDLVGTMRDGTHR 345 PLADALSRMRRINSHLALVTADNGSVVGMVALEDVVEDLVGTMRDGTHR Sbjct 301 PLADALSRMRRINSHLALVTADNGSVVGMVALEDVVEDLVGTMRDGTHR 349 >gi|340626849|ref|YP_004745301.1| hypothetical protein MCAN_18561 [Mycobacterium canettii CIPT 140010059] gi|340005039|emb|CCC44188.1| conserved hypothetical membrane protein [Mycobacterium canettii CIPT 140010059] Length=349 Score = 644 bits (1661), Expect = 0.0, Method: Compositional matrix adjust. Identities = 343/349 (99%), Positives = 343/349 (99%), Gaps = 4/349 (1%) Query 1 MDVLSAVLLALLLIGANAFFVGAEFALISARRDRLEALAEQGKATAVTVIRAGEQLPAML 60 MDVLSAVLLALLLIGANAFFVGAEFALISARRDRLEALAEQGKATAVTVIRAGEQLPAML Sbjct 1 MDVLSAVLLALLLIGANAFFVGAEFALISARRDRLEALAEQGKATAVTVIRAGEQLPAML 60 Query 61 TGAQLGVTVSSILLGRVGEPAVVKLLQLSFGLSGVPPALLHTLSLA----IVVALHVLLG 116 TGAQLGVTVSSILLGRVGEPAV KLLQLSFGLSGVPPALLHTLSLA IVVALHVLLG Sbjct 61 TGAQLGVTVSSILLGRVGEPAVAKLLQLSFGLSGVPPALLHTLSLAVALAIVVALHVLLG 120 Query 117 EMVPKNIALAGPERTAMLLVPPYLVYVRLARPFIAFYNNCANAILRLVGVQPKDELDIAV 176 EMVPKNIALAGPERTAMLLVPPYLVYVRLARPFIAFYNNCANAILRLVGVQPKDELDIAV Sbjct 121 EMVPKNIALAGPERTAMLLVPPYLVYVRLARPFIAFYNNCANAILRLVGVQPKDELDIAV 180 Query 177 STAELSEMIAESLSEGLLDHEEHTRLTRALRIRTRLVADVAVPLVNIRAVQVSAVGSGPT 236 STAELSEMIAESLSEGLLDHEEHTRLTRALRIRTRLVADVAVPLVNIRAVQVSAVGSGPT Sbjct 181 STAELSEMIAESLSEGLLDHEEHTRLTRALRIRTRLVADVAVPLVNIRAVQVSAVGSGPT 240 Query 237 IGGVEQALAQTGYSRFPVVDRGGRFIGYLHIKDVLTLGDNPQTVIDLAVVRPLPRVPQSL 296 IGGVEQALAQTGYSRFPVVDRGGRFIGYLHIKDVLTLGDNPQTVIDLAVVRPLPRVPQSL Sbjct 241 IGGVEQALAQTGYSRFPVVDRGGRFIGYLHIKDVLTLGDNPQTVIDLAVVRPLPRVPQSL 300 Query 297 PLADALSRMRRINSHLALVTADNGSVVGMVALEDVVEDLVGTMRDGTHR 345 PLADALSRMRR NSHLALVTADNGSVVGMVALEDVVEDLVGTMRDGTHR Sbjct 301 PLADALSRMRRNNSHLALVTADNGSVVGMVALEDVVEDLVGTMRDGTHR 349 >gi|254232020|ref|ZP_04925347.1| conserved hypothetical membrane protein [Mycobacterium tuberculosis C] gi|124601079|gb|EAY60089.1| conserved hypothetical membrane protein [Mycobacterium tuberculosis C] Length=346 Score = 635 bits (1639), Expect = 2e-180, Method: Compositional matrix adjust. Identities = 339/346 (98%), Positives = 341/346 (99%), Gaps = 1/346 (0%) Query 1 MDVLSAVLLALLLIGANAFFVGAEFALISARRDRLEALAEQGKATAVTVIRAGEQLPAML 60 MDVLSAVLLALLLIGANAFFVGAEFALISARRDRLEALAEQGKATAVTVIRAGEQLPAML Sbjct 1 MDVLSAVLLALLLIGANAFFVGAEFALISARRDRLEALAEQGKATAVTVIRAGEQLPAML 60 Query 61 TGAQLGVTVSSILLGRVGEPAVVKLLQLSFGLSGVPPALLHTLSLAIVVALHVLLGEMVP 120 TGAQLGVTVSSILLGRVGEPAVVKLLQLSFGLSGVPPALLHTLSLAIVVALHVLLGEMVP Sbjct 61 TGAQLGVTVSSILLGRVGEPAVVKLLQLSFGLSGVPPALLHTLSLAIVVALHVLLGEMVP 120 Query 121 KNIALAGPERTAMLLVPPYLVYVRLARPFIAFYNNCANAILRL-VGVQPKDELDIAVSTA 179 KNIALAGPERTAMLLVPPYLVYVRLARPFIAFYN CANAIL+ + VQPKDELDIAVS A Sbjct 121 KNIALAGPERTAMLLVPPYLVYVRLARPFIAFYNICANAILQAELRVQPKDELDIAVSAA 180 Query 180 ELSEMIAESLSEGLLDHEEHTRLTRALRIRTRLVADVAVPLVNIRAVQVSAVGSGPTIGG 239 ELSEMIAESLSEGLLDHEEHTRLTRALRIRTRLVADVAVPLVNIRAVQVSAVGSGPTIGG Sbjct 181 ELSEMIAESLSEGLLDHEEHTRLTRALRIRTRLVADVAVPLVNIRAVQVSAVGSGPTIGG 240 Query 240 VEQALAQTGYSRFPVVDRGGRFIGYLHIKDVLTLGDNPQTVIDLAVVRPLPRVPQSLPLA 299 VEQALAQTGYSRFPVVDRGGRFIGYLHIKDVLTLGDNPQTVIDLAVVRPLPRVPQSLPLA Sbjct 241 VEQALAQTGYSRFPVVDRGGRFIGYLHIKDVLTLGDNPQTVIDLAVVRPLPRVPQSLPLA 300 Query 300 DALSRMRRINSHLALVTADNGSVVGMVALEDVVEDLVGTMRDGTHR 345 DALSRMRRINSHLALVTADNGSVVGMVALEDVVEDLVGTMRDGTHR Sbjct 301 DALSRMRRINSHLALVTADNGSVVGMVALEDVVEDLVGTMRDGTHR 346 >gi|289750414|ref|ZP_06509792.1| conserved membrane protein [Mycobacterium tuberculosis T92] gi|289753934|ref|ZP_06513312.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054] gi|289691001|gb|EFD58430.1| conserved membrane protein [Mycobacterium tuberculosis T92] gi|289694521|gb|EFD61950.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054] Length=347 Score = 635 bits (1637), Expect = 4e-180, Method: Compositional matrix adjust. Identities = 326/331 (99%), Positives = 326/331 (99%), Gaps = 4/331 (1%) Query 19 FFVGAEFALISARRDRLEALAEQGKATAVTVIRAGEQLPAMLTGAQLGVTVSSILLGRVG 78 FFVGAEFALISARRDRLEALAEQGKATAVTVIRAGEQLPAMLTGAQLGVTVSSILLGRVG Sbjct 17 FFVGAEFALISARRDRLEALAEQGKATAVTVIRAGEQLPAMLTGAQLGVTVSSILLGRVG 76 Query 79 EPAVVKLLQLSFGLSGVPPALLHTLSLA----IVVALHVLLGEMVPKNIALAGPERTAML 134 EPAVVKLLQLSFGLSGVPPALLHTLSLA IVVALHVLLGEMVPKNIALAGPERTAML Sbjct 77 EPAVVKLLQLSFGLSGVPPALLHTLSLAVALAIVVALHVLLGEMVPKNIALAGPERTAML 136 Query 135 LVPPYLVYVRLARPFIAFYNNCANAILRLVGVQPKDELDIAVSTAELSEMIAESLSEGLL 194 LVP YLVYVRLARPFIAFYNNCANAILRLVGVQPKDELDIAVSTAELSEMIAESLSEGLL Sbjct 137 LVPLYLVYVRLARPFIAFYNNCANAILRLVGVQPKDELDIAVSTAELSEMIAESLSEGLL 196 Query 195 DHEEHTRLTRALRIRTRLVADVAVPLVNIRAVQVSAVGSGPTIGGVEQALAQTGYSRFPV 254 DHEEHTRLTRALRIRTRLVADVAVPLVNIRAVQVSAVGSGPTIGGVEQALAQTGYSRFPV Sbjct 197 DHEEHTRLTRALRIRTRLVADVAVPLVNIRAVQVSAVGSGPTIGGVEQALAQTGYSRFPV 256 Query 255 VDRGGRFIGYLHIKDVLTLGDNPQTVIDLAVVRPLPRVPQSLPLADALSRMRRINSHLAL 314 VDRGGRFIGYLHIKDVLTLGDNPQTVIDLAVVRPLPRVPQSLPLADALSRMRRINSHLAL Sbjct 257 VDRGGRFIGYLHIKDVLTLGDNPQTVIDLAVVRPLPRVPQSLPLADALSRMRRINSHLAL 316 Query 315 VTADNGSVVGMVALEDVVEDLVGTMRDGTHR 345 VTADNGSVVGMVALEDVVEDLVGTMRDGTHR Sbjct 317 VTADNGSVVGMVALEDVVEDLVGTMRDGTHR 347 >gi|183982721|ref|YP_001851012.1| hypothetical protein MMAR_2715 [Mycobacterium marinum M] gi|183176047|gb|ACC41157.1| conserved hypothetical protein [Mycobacterium marinum M] Length=350 Score = 510 bits (1313), Expect = 2e-142, Method: Compositional matrix adjust. Identities = 262/331 (80%), Positives = 285/331 (87%), Gaps = 4/331 (1%) Query 19 FFVGAEFALISARRDRLEALAEQGKATAVTVIRAGEQLPAMLTGAQLGVTVSSILLGRVG 78 FFVGAEFALISARRDRLEALAEQG+ +AVTVIRA EQLP+ML GAQ GVTVSSILLGR+ Sbjct 19 FFVGAEFALISARRDRLEALAEQGRTSAVTVIRAAEQLPSMLAGAQFGVTVSSILLGRIA 78 Query 79 EPAVVKLLQLSFGLSGVPPALLHTLS----LAIVVALHVLLGEMVPKNIALAGPERTAML 134 EPA + LQ FGL+G+ P LLHTLS LAIVV LHVLLGEMVPKNIALAGPERTAML Sbjct 79 EPAAAQTLQRWFGLAGLDPRLLHTLSFVVALAIVVTLHVLLGEMVPKNIALAGPERTAML 138 Query 135 LVPPYLVYVRLARPFIAFYNNCANAILRLVGVQPKDELDIAVSTAELSEMIAESLSEGLL 194 LVP YL YVR ARP I YN CANAILR+ GVQPKDELDI VST ELSEMIAES+SEGLL Sbjct 139 LVPAYLPYVRAARPIIFLYNKCANAILRIFGVQPKDELDITVSTVELSEMIAESVSEGLL 198 Query 195 DHEEHTRLTRALRIRTRLVADVAVPLVNIRAVQVSAVGSGPTIGGVEQALAQTGYSRFPV 254 D EEHTRLTRALRIRTR+V DVAVPL NIRAV V+A GSGPTIG VEQALA+TGYSRFPV Sbjct 199 DPEEHTRLTRALRIRTRVVDDVAVPLPNIRAVPVAAAGSGPTIGAVEQALAETGYSRFPV 258 Query 255 VDRGGRFIGYLHIKDVLTLGDNPQTVIDLAVVRPLPRVPQSLPLADALSRMRRINSHLAL 314 + FIGYLHIKDVL LGD+P TVIDLA+VRPLP++ +SLPL DALSRMRR NSHLAL Sbjct 259 LGLDQHFIGYLHIKDVLALGDDPATVIDLALVRPLPQLAKSLPLPDALSRMRRSNSHLAL 318 Query 315 VTADNGSVVGMVALEDVVEDLVGTMRDGTHR 345 VT+D+G+V GMVALED+VEDLVGT+ DG HR Sbjct 319 VTSDDGAVAGMVALEDLVEDLVGTLSDGKHR 349 >gi|296164823|ref|ZP_06847382.1| CBS domain protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295899837|gb|EFG79284.1| CBS domain protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=346 Score = 508 bits (1307), Expect = 8e-142, Method: Compositional matrix adjust. Identities = 257/339 (76%), Positives = 295/339 (88%), Gaps = 4/339 (1%) Query 7 VLLALLLIGANAFFVGAEFALISARRDRLEALAEQGKATAVTVIRAGEQLPAMLTGAQLG 66 V+LA+LLIG NAFFVGAEF+LISARRDRLEALAEQGKA AVTV+RAGEQLPAML GAQLG Sbjct 7 VVLAILLIGVNAFFVGAEFSLISARRDRLEALAEQGKARAVTVMRAGEQLPAMLAGAQLG 66 Query 67 VTVSSILLGRVGEPAVVKLLQLSFGLSGVPPALLHTLS----LAIVVALHVLLGEMVPKN 122 +T +S+LLGR+GE AV LL+ + GL+G+ P LLHTLS LAIVV LHVLLGEMVPKN Sbjct 67 ITAASLLLGRIGESAVSSLLRTALGLTGIHPTLLHTLSFAIALAIVVTLHVLLGEMVPKN 126 Query 123 IALAGPERTAMLLVPPYLVYVRLARPFIAFYNNCANAILRLVGVQPKDELDIAVSTAELS 182 IALAGPERTAMLLVPPYL YVR ARPFI FYN CA+ ++R +GV+P++EL+I VS ELS Sbjct 127 IALAGPERTAMLLVPPYLAYVRAARPFIVFYNRCASVVVRALGVEPREELEITVSPVELS 186 Query 183 EMIAESLSEGLLDHEEHTRLTRALRIRTRLVADVAVPLVNIRAVQVSAVGSGPTIGGVEQ 242 EMIAES SEGLLD EEH+RLTRAL+I TR+V DVAVPL ++ AV V+A G+GPTIG VEQ Sbjct 187 EMIAESESEGLLDREEHSRLTRALQIGTRVVGDVAVPLADVHAVPVAAAGTGPTIGAVEQ 246 Query 243 ALAQTGYSRFPVVDRGGRFIGYLHIKDVLTLGDNPQTVIDLAVVRPLPRVPQSLPLADAL 302 ALA+TGYSRFPV + G F+GYLHIKD+LTLGD+P+TVIDLA+VRPLPR+P+SLPLADAL Sbjct 247 ALARTGYSRFPVANVNGDFVGYLHIKDMLTLGDDPRTVIDLAMVRPLPRLPRSLPLADAL 306 Query 303 SRMRRINSHLALVTADNGSVVGMVALEDVVEDLVGTMRD 341 SRMRR NSHLALVT G VV MVA+ED+VEDLVGTMRD Sbjct 307 SRMRRSNSHLALVTGAGGVVVAMVAMEDLVEDLVGTMRD 345 >gi|41407648|ref|NP_960484.1| hypothetical protein MAP1550c [Mycobacterium avium subsp. paratuberculosis K-10] gi|41396001|gb|AAS03867.1| hypothetical protein MAP_1550c [Mycobacterium avium subsp. paratuberculosis K-10] Length=346 Score = 501 bits (1290), Expect = 7e-140, Method: Compositional matrix adjust. Identities = 258/340 (76%), Positives = 289/340 (85%), Gaps = 4/340 (1%) Query 7 VLLALLLIGANAFFVGAEFALISARRDRLEALAEQGKATAVTVIRAGEQLPAMLTGAQLG 66 VLLA LLIG NAFFVGAEF+LISARRDRLEALAEQG+A AVTVIRA EQLP+ML GAQLG Sbjct 7 VLLACLLIGVNAFFVGAEFSLISARRDRLEALAEQGRAAAVTVIRASEQLPSMLAGAQLG 66 Query 67 VTVSSILLGRVGEPAVVKLLQLSFGLSGVPPALLHTLSLAI----VVALHVLLGEMVPKN 122 VT +S+LLGR+GE AV LL+ GL+ + PALLHTLSLAI VV LHVLLGEMVPKN Sbjct 67 VTAASLLLGRIGESAVSNLLRTVLGLTRIHPALLHTLSLAIALAIVVTLHVLLGEMVPKN 126 Query 123 IALAGPERTAMLLVPPYLVYVRLARPFIAFYNNCANAILRLVGVQPKDELDIAVSTAELS 182 IALAGPERTAMLLVPPYL YVR ARPFIAFYN CA+ ++R +GV+PK+EL+I VS ELS Sbjct 127 IALAGPERTAMLLVPPYLAYVRAARPFIAFYNRCASVVVRALGVEPKEELEITVSPVELS 186 Query 183 EMIAESLSEGLLDHEEHTRLTRALRIRTRLVADVAVPLVNIRAVQVSAVGSGPTIGGVEQ 242 EMIAES SEGLLD EEHTRLTRAL++R R+V DVAVPL + AV V+A GSGPT+G VEQ Sbjct 187 EMIAESESEGLLDREEHTRLTRALQLRHRVVGDVAVPLARVHAVPVAAPGSGPTVGAVEQ 246 Query 243 ALAQTGYSRFPVVDRGGRFIGYLHIKDVLTLGDNPQTVIDLAVVRPLPRVPQSLPLADAL 302 ALAQTGYSRFPV + G FIGYLHIKDVLTL D+P TVI+LA VRPLPR+P+SLPLAD L Sbjct 247 ALAQTGYSRFPVTNPTGDFIGYLHIKDVLTLDDDPATVINLAKVRPLPRLPRSLPLADGL 306 Query 303 SRMRRINSHLALVTADNGSVVGMVALEDVVEDLVGTMRDG 342 SRMRR NSHLALVT G+VV MVA+ED+VEDLVGTMR+ Sbjct 307 SRMRRSNSHLALVTDQGGAVVAMVAMEDLVEDLVGTMREA 346 >gi|342861259|ref|ZP_08717907.1| hypothetical protein MCOL_20346 [Mycobacterium colombiense CECT 3035] gi|342131159|gb|EGT84440.1| hypothetical protein MCOL_20346 [Mycobacterium colombiense CECT 3035] Length=346 Score = 501 bits (1290), Expect = 7e-140, Method: Compositional matrix adjust. Identities = 261/339 (77%), Positives = 292/339 (87%), Gaps = 4/339 (1%) Query 7 VLLALLLIGANAFFVGAEFALISARRDRLEALAEQGKATAVTVIRAGEQLPAMLTGAQLG 66 +LLA LLIG NAFFVGAEF+LISARRDRLEALAEQGKA AVTVIRAGEQLP+ML GAQLG Sbjct 7 LLLACLLIGVNAFFVGAEFSLISARRDRLEALAEQGKAAAVTVIRAGEQLPSMLAGAQLG 66 Query 67 VTVSSILLGRVGEPAVVKLLQLSFGLSGVPPALLHTLS----LAIVVALHVLLGEMVPKN 122 VT +S+LLGR+GE AV +L+ + GL+G+ PALLHTLS LAIVV LHVLLGEMVPKN Sbjct 67 VTAASLLLGRIGESAVSNVLRTALGLTGIHPALLHTLSFAIALAIVVTLHVLLGEMVPKN 126 Query 123 IALAGPERTAMLLVPPYLVYVRLARPFIAFYNNCANAILRLVGVQPKDELDIAVSTAELS 182 IALAGPERTAMLLVPPYL YVR ARPFI FYN CAN ++R GV+PKDEL+I VS ELS Sbjct 127 IALAGPERTAMLLVPPYLAYVRAARPFIVFYNKCANLVVRAFGVEPKDELEITVSPVELS 186 Query 183 EMIAESLSEGLLDHEEHTRLTRALRIRTRLVADVAVPLVNIRAVQVSAVGSGPTIGGVEQ 242 EMIAES SEGLLD EEHTRLTRAL+IR R+V DVAVPL + AV V+A GSGPT+G VEQ Sbjct 187 EMIAESESEGLLDREEHTRLTRALQIRHRVVGDVAVPLAAVHAVPVAAAGSGPTVGAVEQ 246 Query 243 ALAQTGYSRFPVVDRGGRFIGYLHIKDVLTLGDNPQTVIDLAVVRPLPRVPQSLPLADAL 302 ALAQTGYSRFPV G F+GYLHIKDVLTL D+P+TVIDLA+VRPLPR+ ++LPLADAL Sbjct 247 ALAQTGYSRFPVASVSGVFLGYLHIKDVLTLDDDPRTVIDLAMVRPLPRLSRALPLADAL 306 Query 303 SRMRRINSHLALVTADNGSVVGMVALEDVVEDLVGTMRD 341 SRMRR NSHLALVT + G+VV MVA+ED+VEDLVGTMRD Sbjct 307 SRMRRSNSHLALVTDELGAVVAMVAMEDLVEDLVGTMRD 345 >gi|336457599|gb|EGO36604.1| CBS domain-containing protein [Mycobacterium avium subsp. paratuberculosis S397] Length=342 Score = 501 bits (1289), Expect = 1e-139, Method: Compositional matrix adjust. Identities = 258/340 (76%), Positives = 289/340 (85%), Gaps = 4/340 (1%) Query 7 VLLALLLIGANAFFVGAEFALISARRDRLEALAEQGKATAVTVIRAGEQLPAMLTGAQLG 66 VLLA LLIG NAFFVGAEF+LISARRDRLEALAEQG+A AVTVIRA EQLP+ML GAQLG Sbjct 3 VLLACLLIGVNAFFVGAEFSLISARRDRLEALAEQGRAAAVTVIRASEQLPSMLAGAQLG 62 Query 67 VTVSSILLGRVGEPAVVKLLQLSFGLSGVPPALLHTLSLAI----VVALHVLLGEMVPKN 122 VT +S+LLGR+GE AV LL+ GL+ + PALLHTLSLAI VV LHVLLGEMVPKN Sbjct 63 VTAASLLLGRIGESAVSNLLRTVLGLTRIHPALLHTLSLAIALAIVVTLHVLLGEMVPKN 122 Query 123 IALAGPERTAMLLVPPYLVYVRLARPFIAFYNNCANAILRLVGVQPKDELDIAVSTAELS 182 IALAGPERTAMLLVPPYL YVR ARPFIAFYN CA+ ++R +GV+PK+EL+I VS ELS Sbjct 123 IALAGPERTAMLLVPPYLAYVRAARPFIAFYNRCASVVVRALGVEPKEELEITVSPVELS 182 Query 183 EMIAESLSEGLLDHEEHTRLTRALRIRTRLVADVAVPLVNIRAVQVSAVGSGPTIGGVEQ 242 EMIAES SEGLLD EEHTRLTRAL++R R+V DVAVPL + AV V+A GSGPT+G VEQ Sbjct 183 EMIAESESEGLLDREEHTRLTRALQLRHRVVGDVAVPLARVHAVPVAAPGSGPTVGAVEQ 242 Query 243 ALAQTGYSRFPVVDRGGRFIGYLHIKDVLTLGDNPQTVIDLAVVRPLPRVPQSLPLADAL 302 ALAQTGYSRFPV + G FIGYLHIKDVLTL D+P TVI+LA VRPLPR+P+SLPLAD L Sbjct 243 ALAQTGYSRFPVTNPTGDFIGYLHIKDVLTLDDDPATVINLAKVRPLPRLPRSLPLADGL 302 Query 303 SRMRRINSHLALVTADNGSVVGMVALEDVVEDLVGTMRDG 342 SRMRR NSHLALVT G+VV MVA+ED+VEDLVGTMR+ Sbjct 303 SRMRRSNSHLALVTDQGGAVVAMVAMEDLVEDLVGTMREA 342 >gi|118462853|ref|YP_882065.1| CBS domain-containing protein [Mycobacterium avium 104] gi|254775355|ref|ZP_05216871.1| CBS domain-containing protein [Mycobacterium avium subsp. avium ATCC 25291] gi|118164140|gb|ABK65037.1| CBS domain protein [Mycobacterium avium 104] Length=346 Score = 499 bits (1286), Expect = 2e-139, Method: Compositional matrix adjust. Identities = 257/340 (76%), Positives = 289/340 (85%), Gaps = 4/340 (1%) Query 7 VLLALLLIGANAFFVGAEFALISARRDRLEALAEQGKATAVTVIRAGEQLPAMLTGAQLG 66 VLLA LLIG NAFFVGAEF+LISARRDRLEALAEQG+A AVTVIRA EQLP+ML GAQLG Sbjct 7 VLLACLLIGVNAFFVGAEFSLISARRDRLEALAEQGRAAAVTVIRASEQLPSMLAGAQLG 66 Query 67 VTVSSILLGRVGEPAVVKLLQLSFGLSGVPPALLHTLSLAI----VVALHVLLGEMVPKN 122 VT +S+LLGR+GE AV LL+ GL+ + PALLH+LSLAI VV LHVLLGEMVPKN Sbjct 67 VTAASLLLGRIGESAVSNLLRTVLGLTRIHPALLHSLSLAIALAIVVTLHVLLGEMVPKN 126 Query 123 IALAGPERTAMLLVPPYLVYVRLARPFIAFYNNCANAILRLVGVQPKDELDIAVSTAELS 182 IALAGPERTAMLLVPPYL YVR ARPFIAFYN CA+ ++R +GV+PK+EL+I VS ELS Sbjct 127 IALAGPERTAMLLVPPYLAYVRAARPFIAFYNRCASVMVRALGVEPKEELEITVSPVELS 186 Query 183 EMIAESLSEGLLDHEEHTRLTRALRIRTRLVADVAVPLVNIRAVQVSAVGSGPTIGGVEQ 242 EMIAES SEGLLD EEHTRLTRAL++R R+V DVAVPL + AV V+A GSGPT+G VEQ Sbjct 187 EMIAESESEGLLDREEHTRLTRALQLRHRVVGDVAVPLARVHAVPVAAPGSGPTVGAVEQ 246 Query 243 ALAQTGYSRFPVVDRGGRFIGYLHIKDVLTLGDNPQTVIDLAVVRPLPRVPQSLPLADAL 302 ALAQTGYSRFPV + G FIGYLHIKDVLTL D+P TVI+LA VRPLPR+P+SLPLAD L Sbjct 247 ALAQTGYSRFPVTNPTGDFIGYLHIKDVLTLDDDPATVINLAKVRPLPRLPRSLPLADGL 306 Query 303 SRMRRINSHLALVTADNGSVVGMVALEDVVEDLVGTMRDG 342 SRMRR NSHLALVT G+VV MVA+ED+VEDLVGTMR+ Sbjct 307 SRMRRSNSHLALVTDQGGAVVAMVAMEDLVEDLVGTMREA 346 >gi|120404074|ref|YP_953903.1| hypothetical protein Mvan_3095 [Mycobacterium vanbaalenii PYR-1] gi|119956892|gb|ABM13897.1| protein of unknown function DUF21 [Mycobacterium vanbaalenii PYR-1] Length=353 Score = 485 bits (1249), Expect = 4e-135, Method: Compositional matrix adjust. Identities = 251/346 (73%), Positives = 289/346 (84%), Gaps = 7/346 (2%) Query 7 VLLALLLIGANAFFVGAEFALISARRDRLEALAEQGKATAVTVIRAGEQLPAMLTGAQLG 66 VLL +L+GANAFFV +EFALISARRDRLEALAEQGK++AVTVIRAGE L ML G+QLG Sbjct 7 VLLTFVLLGANAFFVASEFALISARRDRLEALAEQGKSSAVTVIRAGENLSLMLAGSQLG 66 Query 67 VTVSSILLGRVGEPAVVKLLQLSFGLSGVPPALLHTLS----LAIVVALHVLLGEMVPKN 122 +TV SILLGRV EPAV LL+ FGL G+P A+LHT+S L+IVV LHVLLGEMVPKN Sbjct 67 ITVCSILLGRVAEPAVAHLLEKPFGLVGIPDAVLHTVSFLVALSIVVTLHVLLGEMVPKN 126 Query 123 IALAGPERTAMLLVPPYLVYVRLARPFIAFYNNCANAILRLVGVQPKDELDIAVSTAELS 182 IA+AGPE TAMLL+P YLVY+R+ARPFIAFYN CANA LR GV+PKDELD+ VST ELS Sbjct 127 IAIAGPESTAMLLIPVYLVYIRMARPFIAFYNWCANATLRAFGVEPKDELDVTVSTVELS 186 Query 183 EMIAESLSEGLLDHEEHTRLTRALRIRTRLVADVAVPLVNIRAVQVSAVGSGPTIGGVEQ 242 EMIAESLSEGLLD EEHTRLTRAL+IR R+V DVA+PL IRAV V+ G+GPT+G +E+ Sbjct 187 EMIAESLSEGLLDPEEHTRLTRALQIRNRVVNDVAMPLHQIRAVPVAQEGAGPTVGALEE 246 Query 243 ALAQTGYSRFPVVDRGGRFIGYLHIKDVLTL--GDNPQT-VIDLAVVRPLPRVPQSLPLA 299 AL +TGYSRFPV D G +IGYLHIKDVL L GD+ T VI+ ++VRPLPRVP SLPL Sbjct 247 ALKETGYSRFPVADPTGAYIGYLHIKDVLPLVAGDSGGTAVIETSMVRPLPRVPASLPLP 306 Query 300 DALSRMRRINSHLALVTADNGSVVGMVALEDVVEDLVGTMRDGTHR 345 DAL+R+RR NSHLALVTA +G+ MVALED+VEDLVGT+RD THR Sbjct 307 DALTRLRRTNSHLALVTAGDGTPTAMVALEDLVEDLVGTVRDSTHR 352 >gi|240171761|ref|ZP_04750420.1| hypothetical membrane protein [Mycobacterium kansasii ATCC 12478] Length=349 Score = 482 bits (1241), Expect = 4e-134, Method: Compositional matrix adjust. Identities = 261/349 (75%), Positives = 302/349 (87%), Gaps = 5/349 (1%) Query 1 MDVLSAVLLALLLIGANAFFVGAEFALISARRDRLEALAEQGKATAVTVIRAGEQLPAML 60 M+ + AV L LLIGANAFFVGAEFALISARRDRLEALAEQG+ +AVTVIRAGEQL ML Sbjct 1 MNPMLAVALTFLLIGANAFFVGAEFALISARRDRLEALAEQGRTSAVTVIRAGEQLALML 60 Query 61 TGAQLGVTVSSILLGRVGEPAVVKLLQLSFGLSGVPPALLHTLS----LAIVVALHVLLG 116 TGAQLG+TV SILLGR+GEPAV +LL L+G+P ALLH LS L+IVV LHVLLG Sbjct 61 TGAQLGITVFSILLGRIGEPAVAQLLHPLLHLAGIPDALLHLLSFGIALSIVVMLHVLLG 120 Query 117 EMVPKNIALAGPERTAMLLVPPYLVYVRLARPFIAFYNNCANAILRLVGVQPKDELDIAV 176 EMVPKNIA+AGPE+ AMLLVPPYL+Y+R ARPFIA Y+ A AILR +GV+PKDELDI V Sbjct 121 EMVPKNIAIAGPEKAAMLLVPPYLIYMRAARPFIALYDRSAKAILRALGVEPKDELDITV 180 Query 177 STAELSEMIAESLSEGLLDHEEHTRLTRALRIRTRLVADVAVPLVNIRAVQVSAVGSGPT 236 ST EL+EMIAES+SEGLLD EEHTRLTRALRIRTR+VADVAVP+ +IR+V V+AVGSGPT Sbjct 181 STVELAEMIAESVSEGLLDPEEHTRLTRALRIRTRVVADVAVPVSDIRSVPVAAVGSGPT 240 Query 237 IGGVEQALAQTGYSRFPVVDRGGRFIGYLHIKDVLTLGDNPQTVIDLAVVRPLPRVPQSL 296 +G VEQALAQTG+SR+PVVDR G FIGY+HIKDVL LG++ TVI +VRPLP +P++L Sbjct 241 VGAVEQALAQTGFSRYPVVDR-GTFIGYVHIKDVLALGEDDHTVIKAEMVRPLPPLPKAL 299 Query 297 PLADALSRMRRINSHLALVTADNGSVVGMVALEDVVEDLVGTMRDGTHR 345 PLADALSRMRR NSHLALVT+D+G+VVGMVALED+V+DLVGTMR+ +R Sbjct 300 PLADALSRMRRSNSHLALVTSDDGTVVGMVALEDLVDDLVGTMRNQRNR 348 >gi|254820857|ref|ZP_05225858.1| hypothetical protein MintA_13065 [Mycobacterium intracellulare ATCC 13950] Length=346 Score = 476 bits (1226), Expect = 2e-132, Method: Compositional matrix adjust. Identities = 244/339 (72%), Positives = 282/339 (84%), Gaps = 4/339 (1%) Query 7 VLLALLLIGANAFFVGAEFALISARRDRLEALAEQGKATAVTVIRAGEQLPAMLTGAQLG 66 VLLA LLI NA+FVGAEF+LISARRDRLEALAEQG+A AVTVIRAGEQLP+ML GAQLG Sbjct 7 VLLACLLIAVNAYFVGAEFSLISARRDRLEALAEQGRAAAVTVIRAGEQLPSMLAGAQLG 66 Query 67 VTVSSILLGRVGEPAVVKLLQLSFGLSGVPPALLHTLSLA----IVVALHVLLGEMVPKN 122 VT +S+LLGR+GE AV LL+ GL+ + PALLHTLSLA IVV LHVLLGEMVPKN Sbjct 67 VTAASLLLGRIGESAVSDLLRTGLGLTAIHPALLHTLSLALALVIVVTLHVLLGEMVPKN 126 Query 123 IALAGPERTAMLLVPPYLVYVRLARPFIAFYNNCANAILRLVGVQPKDELDIAVSTAELS 182 IALAGPERTAMLLVPPYL YVR ARPFI FY+ CA+ ++R +GV+ K+EL+I VS ELS Sbjct 127 IALAGPERTAMLLVPPYLAYVRAARPFIVFYDKCASVVVRALGVERKEELEITVSPVELS 186 Query 183 EMIAESLSEGLLDHEEHTRLTRALRIRTRLVADVAVPLVNIRAVQVSAVGSGPTIGGVEQ 242 MIAES SEGLLD EE TRL RAL+IR R+V DVAVPL +RAV V+ G GPT+ VE+ Sbjct 187 AMIAESASEGLLDQEEGTRLARALQIRHRVVGDVAVPLSGVRAVPVAGAGKGPTVAAVEE 246 Query 243 ALAQTGYSRFPVVDRGGRFIGYLHIKDVLTLGDNPQTVIDLAVVRPLPRVPQSLPLADAL 302 ALAQ+GYSRFPV + G F+GYLHIKDVLTL D+P+TVIDLA VRPLP +P+SLPLA+AL Sbjct 247 ALAQSGYSRFPVANVDGSFVGYLHIKDVLTLDDDPETVIDLAKVRPLPGLPRSLPLAEAL 306 Query 303 SRMRRINSHLALVTADNGSVVGMVALEDVVEDLVGTMRD 341 SR+RR NSHLALV + G+VV MVA+ED+VED VGTMR+ Sbjct 307 SRLRRSNSHLALVIDEIGAVVAMVAMEDLVEDFVGTMRE 345 >gi|145223951|ref|YP_001134629.1| hypothetical protein Mflv_3365 [Mycobacterium gilvum PYR-GCK] gi|315444283|ref|YP_004077162.1| CBS domain-containing protein [Mycobacterium sp. Spyr1] gi|145216437|gb|ABP45841.1| protein of unknown function DUF21 [Mycobacterium gilvum PYR-GCK] gi|315262586|gb|ADT99327.1| CBS domain-containing protein [Mycobacterium sp. Spyr1] Length=353 Score = 476 bits (1224), Expect = 3e-132, Method: Compositional matrix adjust. Identities = 242/346 (70%), Positives = 284/346 (83%), Gaps = 7/346 (2%) Query 7 VLLALLLIGANAFFVGAEFALISARRDRLEALAEQGKATAVTVIRAGEQLPAMLTGAQLG 66 VLL +L+GANAFFV +EFALISARRDRLEALAEQGK++AVTVIRAGE L ML G+QLG Sbjct 7 VLLTFVLLGANAFFVASEFALISARRDRLEALAEQGKSSAVTVIRAGENLSLMLAGSQLG 66 Query 67 VTVSSILLGRVGEPAVVKLLQLSFGLSGVPPALLHTLS----LAIVVALHVLLGEMVPKN 122 +T+ SILLGRV EPAV LL+ F L G+P ALLHT+S L+IVV LHVLLGEMVPKN Sbjct 67 ITICSILLGRVAEPAVAHLLEKPFDLVGIPDALLHTVSFLVALSIVVTLHVLLGEMVPKN 126 Query 123 IALAGPERTAMLLVPPYLVYVRLARPFIAFYNNCANAILRLVGVQPKDELDIAVSTAELS 182 IA+AGPE TAMLL+P YL+Y+R+ARPFIAFYN CAN+ LR GV+PKDELD+ VST ELS Sbjct 127 IAIAGPESTAMLLIPVYLLYIRIARPFIAFYNWCANSTLRAFGVEPKDELDVTVSTVELS 186 Query 183 EMIAESLSEGLLDHEEHTRLTRALRIRTRLVADVAVPLVNIRAVQVSAVGSGPTIGGVEQ 242 EMIAESLSEGLLD EEHTRLTRAL+IR R+V DVA+PL IRAV + G+GPT+G +E+ Sbjct 187 EMIAESLSEGLLDPEEHTRLTRALQIRNRVVDDVAMPLHRIRAVPAAHDGAGPTVGALEE 246 Query 243 ALAQTGYSRFPVVDRGGRFIGYLHIKDVLTLGD---NPQTVIDLAVVRPLPRVPQSLPLA 299 AL +TGYSRFPV D G F+GYLHIKDVL L + + T ++ ++VRPLPRVP SLPL Sbjct 247 ALRETGYSRFPVADSTGAFVGYLHIKDVLPLVNGNYDSSTAVEASLVRPLPRVPASLPLP 306 Query 300 DALSRMRRINSHLALVTADNGSVVGMVALEDVVEDLVGTMRDGTHR 345 DAL+R+RR NSHLALVTA +G +VALED+VEDLVGT+RD THR Sbjct 307 DALTRLRRTNSHLALVTAADGDATAVVALEDLVEDLVGTVRDSTHR 352 >gi|108799781|ref|YP_639978.1| hypothetical protein Mmcs_2815 [Mycobacterium sp. MCS] gi|119868891|ref|YP_938843.1| hypothetical protein Mkms_2859 [Mycobacterium sp. KMS] gi|126435422|ref|YP_001071113.1| hypothetical protein Mjls_2842 [Mycobacterium sp. JLS] gi|108770200|gb|ABG08922.1| protein of unknown function DUF21 [Mycobacterium sp. MCS] gi|119694980|gb|ABL92053.1| protein of unknown function DUF21 [Mycobacterium sp. KMS] gi|126235222|gb|ABN98622.1| protein of unknown function DUF21 [Mycobacterium sp. JLS] Length=351 Score = 474 bits (1219), Expect = 1e-131, Method: Compositional matrix adjust. Identities = 239/334 (72%), Positives = 277/334 (83%), Gaps = 4/334 (1%) Query 16 ANAFFVGAEFALISARRDRLEALAEQGKATAVTVIRAGEQLPAMLTGAQLGVTVSSILLG 75 ANAFFV +EFALISARRDRLEALAEQGK +AVTVIRAGE L ML G+QLG+T+ SILLG Sbjct 17 ANAFFVASEFALISARRDRLEALAEQGKNSAVTVIRAGENLSLMLAGSQLGITICSILLG 76 Query 76 RVGEPAVVKLLQLSFGLSGVPPALLHTLS----LAIVVALHVLLGEMVPKNIALAGPERT 131 RVGEPAV LL+ FGL G+P A+LHT+S L++VV LHVLLGEMVPKNIA+AGPE Sbjct 77 RVGEPAVAHLLEKPFGLLGIPDAVLHTVSFVVALSVVVTLHVLLGEMVPKNIAIAGPESA 136 Query 132 AMLLVPPYLVYVRLARPFIAFYNNCANAILRLVGVQPKDELDIAVSTAELSEMIAESLSE 191 AMLL+P YLVY+R ARP IAFYN CANA LR GV+PKDELD+ VST ELSEMIAES+SE Sbjct 137 AMLLIPVYLVYIRAARPLIAFYNWCANATLRAFGVEPKDELDVNVSTVELSEMIAESVSE 196 Query 192 GLLDHEEHTRLTRALRIRTRLVADVAVPLVNIRAVQVSAVGSGPTIGGVEQALAQTGYSR 251 GLLD EEHTRLTRAL+IR R V DVA+PL I A+ SA G GPT+ VE+ALA+TGYSR Sbjct 197 GLLDPEEHTRLTRALQIRNRAVRDVAMPLDTIHAIPASAPGQGPTVAAVERALAETGYSR 256 Query 252 FPVVDRGGRFIGYLHIKDVLTLGDNPQTVIDLAVVRPLPRVPQSLPLADALSRMRRINSH 311 FPV G+++GYLHIKDVL L D+P V+D ++VRPLP++P SLPL DALSR+RR NSH Sbjct 257 FPVTAPSGQYLGYLHIKDVLPLVDDPDAVLDRSMVRPLPQLPASLPLPDALSRLRRTNSH 316 Query 312 LALVTADNGSVVGMVALEDVVEDLVGTMRDGTHR 345 LALVT+ +G+V MVALED+VEDLVGT+RDGTHR Sbjct 317 LALVTSADGAVTAMVALEDLVEDLVGTVRDGTHR 350 >gi|333990571|ref|YP_004523185.1| hypothetical protein JDM601_1931 [Mycobacterium sp. JDM601] gi|333486539|gb|AEF35931.1| conserved hypothetical protein [Mycobacterium sp. JDM601] Length=358 Score = 466 bits (1198), Expect = 3e-129, Method: Compositional matrix adjust. Identities = 247/358 (69%), Positives = 288/358 (81%), Gaps = 14/358 (3%) Query 1 MDVLSAVLLALLLIGANAFFVGAEFALISARRDRLEALAEQGKATAVTVIRAGEQLPAML 60 M L V+L +LL+ ANAFFVGAEF+LISARRDRLEALAEQG+ +AVTVIRAGEQL ML Sbjct 1 MTDLFNVVLTVLLVAANAFFVGAEFSLISARRDRLEALAEQGRQSAVTVIRAGEQLSLML 60 Query 61 TGAQLGVTVSSILLGRVGEPAVVKLLQLSFGLSGVPPALLHTLS----LAIVVALHVLLG 116 GAQLGVTV SILLGR+GEPAV LL+ F L G+P ALLHT++ L IVV LHVL G Sbjct 61 AGAQLGVTVCSILLGRIGEPAVADLLEPVFRLVGIPDALLHTVAFIVALTIVVTLHVLFG 120 Query 117 EMVPKNIALAGPERTAMLLVPPYLVYVRLARPFIAFYNNCANAILRLVGVQPKDELDIAV 176 EMVPKNIALAGPE AMLL+PPYL+Y+ ARPFI FYN CAN LR V VQPKDEL+I V Sbjct 121 EMVPKNIALAGPETAAMLLIPPYLIYMAAARPFIVFYNWCANVTLRAVRVQPKDELEITV 180 Query 177 STAELSEMIAESLSEGLLDHEEHTRLTRALRIRTRLVADVAVPLVNIRAVQVSAVGSGPT 236 ST ELSEMIAES+S GLLD EE+TRLTRAL+IR R VADVA+P+ +IRAV +A G GPT Sbjct 181 STVELSEMIAESVSAGLLDLEEYTRLTRALQIRNRTVADVALPVGDIRAVPAAAPGRGPT 240 Query 237 IGGVEQALAQTGYSRFPVVDRGGRFIGYLHIKDVLTLGDNP---------QTVIDLAVVR 287 + V++ALAQTGYSRFPVVD+ G+++GYLHIKDVL L ++ V+D+ VVR Sbjct 241 VAAVDKALAQTGYSRFPVVDQ-GQYVGYLHIKDVLPLSESSAAAAGGDGAAAVVDIGVVR 299 Query 288 PLPRVPQSLPLADALSRMRRINSHLALVTADNGSVVGMVALEDVVEDLVGTMRDGTHR 345 PLPRVP SLPLADAL+R+RR NSHLALV A +G+VV MVALED+V+D+VGT+RDGTH Sbjct 300 PLPRVPASLPLADALTRLRRTNSHLALVVATDGAVVAMVALEDLVQDVVGTVRDGTHH 357 >gi|118471401|ref|YP_887941.1| CBS domain-containing protein [Mycobacterium smegmatis str. MC2 155] gi|118172688|gb|ABK73584.1| CBS domain protein [Mycobacterium smegmatis str. MC2 155] Length=364 Score = 457 bits (1177), Expect = 1e-126, Method: Compositional matrix adjust. Identities = 238/347 (69%), Positives = 272/347 (79%), Gaps = 18/347 (5%) Query 17 NAFFVGAEFALISARRDRLEALAEQGKATAVTVIRAGEQLPAMLTGAQLGVTVSSILLGR 76 NAFFV AEFALISARRDRL+ALAEQGK +A+TVIRAGE L ML G+QLG+T+ SILLGR Sbjct 17 NAFFVAAEFALISARRDRLQALAEQGKKSAITVIRAGEHLSLMLAGSQLGITICSILLGR 76 Query 77 VGEPAVVKLLQLSFGLSGVPPALLHTLSLAIVVA----LHVLLGEMVPKNIALAGPERTA 132 VGEPAV LL+ F L GV +LHT+S + +A LHVLLGEMVPKNIA+AGPE A Sbjct 77 VGEPAVAHLLEKPFALIGVSDTVLHTVSFVVALAVVVILHVLLGEMVPKNIAIAGPETAA 136 Query 133 MLLVPPYLVYVRLARPFIAFYNNCANAILRLVGVQPKDELDIAVSTAELSEMIAESLSEG 192 MLL+PPYL+Y+R ARPFIAFYN CANA LR GV+P+DEL AVST ELSEMIAES+SEG Sbjct 137 MLLIPPYLLYIRAARPFIAFYNWCANATLRAFGVEPRDELASAVSTVELSEMIAESVSEG 196 Query 193 LLDHEEHTRLTRALRIRTRLVADVAVPLVNIRAVQVSAVGSGPTIGGVEQALAQTGYSRF 252 LLD EEH+RLTRAL+ RTR V DVA+PL I AV V+ G GPT+G VEQALA+TGYSRF Sbjct 197 LLDTEEHSRLTRALQTRTRTVTDVAMPLSGIHAVSVAGPGCGPTVGAVEQALAETGYSRF 256 Query 253 PVVDRGGRFIGYLHIKDVLTLGDNPQTVIDLAVVRPLPRVPQSLPLADALSRMRRINSHL 312 PV D G FIGYLHIKDVL + P +V+DLA+VRPLP+VP SLP+ DALSRMRR NSHL Sbjct 257 PVTDASGTFIGYLHIKDVLLQVNEPDSVVDLAMVRPLPQVPASLPVPDALSRMRRSNSHL 316 Query 313 ALV--------------TADNGSVVGMVALEDVVEDLVGTMRDGTHR 345 ALV TA + +V MVALED+VEDLVGT+RDGTHR Sbjct 317 ALVVDDSLIDVHGSTAHTAADNTVTAMVALEDLVEDLVGTVRDGTHR 363 >gi|169629496|ref|YP_001703145.1| hypothetical protein MAB_2410c [Mycobacterium abscessus ATCC 19977] gi|169241463|emb|CAM62491.1| Conserved hypothetical protein [Mycobacterium abscessus] Length=351 Score = 443 bits (1140), Expect = 2e-122, Method: Compositional matrix adjust. Identities = 224/331 (68%), Positives = 266/331 (81%), Gaps = 4/331 (1%) Query 19 FFVGAEFALISARRDRLEALAEQGKATAVTVIRAGEQLPAMLTGAQLGVTVSSILLGRVG 78 FFVGAEFALISARRDRLEALAE GK AVTV+ AG+ L ML GAQLG+T+ SILLGRVG Sbjct 20 FFVGAEFALISARRDRLEALAEAGKKRAVTVMMAGQNLSLMLAGAQLGITICSILLGRVG 79 Query 79 EPAVVKLLQLSFGLSGVPPALLHT----LSLAIVVALHVLLGEMVPKNIALAGPERTAML 134 EPAV LL+ F L G P A+ HT +SL+IVV LHVLLGEMVPKNIA+AGPE AML Sbjct 80 EPAVAHLLERPFELLGAPAAVTHTVAFVISLSIVVLLHVLLGEMVPKNIAIAGPESAAML 139 Query 135 LVPPYLVYVRLARPFIAFYNNCANAILRLVGVQPKDELDIAVSTAELSEMIAESLSEGLL 194 L+PPYLVY+RLARP IAFYN CAN LRLV V KDEL++ VST ELSEMIAESLSEGLL Sbjct 140 LIPPYLVYIRLARPLIAFYNWCANTALRLVKVPVKDELEVTVSTVELSEMIAESLSEGLL 199 Query 195 DHEEHTRLTRALRIRTRLVADVAVPLVNIRAVQVSAVGSGPTIGGVEQALAQTGYSRFPV 254 D EEHTRL RAL+I+ R+VADV VP IR++ VS P++ VE+A+ +TGYSRFPV Sbjct 200 DEEEHTRLRRALQIQHRVVADVVVPANQIRSIAVSGSAQAPSVTAVERAVTETGYSRFPV 259 Query 255 VDRGGRFIGYLHIKDVLTLGDNPQTVIDLAVVRPLPRVPQSLPLADALSRMRRINSHLAL 314 + G ++GYLHIKDVLT+GD+P+ ++D A +RPLPR+ S+PL +ALS +RR NSHLAL Sbjct 260 IGPRGDYLGYLHIKDVLTMGDDPEAIVDPAFIRPLPRLHGSVPLPEALSTLRRSNSHLAL 319 Query 315 VTADNGSVVGMVALEDVVEDLVGTMRDGTHR 345 ++ +GSVVG+V LED+VEDLVGT+RDGTHR Sbjct 320 MSTTDGSVVGLVTLEDLVEDLVGTVRDGTHR 350 >gi|325674373|ref|ZP_08154062.1| CBS domain protein [Rhodococcus equi ATCC 33707] gi|325555053|gb|EGD24726.1| CBS domain protein [Rhodococcus equi ATCC 33707] Length=362 Score = 392 bits (1007), Expect = 4e-107, Method: Compositional matrix adjust. Identities = 208/353 (59%), Positives = 259/353 (74%), Gaps = 10/353 (2%) Query 1 MDVLSAVLLALLLIGANAFFVGAEFALISARRDRLEALAEQGKATAVTVIRAGEQLPAML 60 M L VLL ++L+ NAFFVGAEFALI+ARRDRL+AL QGK A TVI+AGE L ML Sbjct 1 MGDLFGVLLTVVLLAGNAFFVGAEFALITARRDRLDALHAQGKKRAATVIKAGENLSLML 60 Query 61 TGAQLGVTVSSILLGRVGEPAVVKLLQLSFGLSGVPPALLH----TLSLAIVVALHVLLG 116 GAQLG+T+ SILLG+VGEPA+ L++ GVP ALLH T++L +VV LH+LLG Sbjct 61 AGAQLGITICSILLGKVGEPAIAHLIEAPMDALGVPDALLHPMAFTIALGLVVVLHILLG 120 Query 117 EMVPKNIALAGPERTAMLLVPPYLVYVRLARPFIAFYNNCANAILRLVGVQPKDELDIAV 176 EMVPKNIA+AGPE+TAMLLVP +L +++LARP IAFYN AN IL+++ V+PKDELD V Sbjct 121 EMVPKNIAIAGPEKTAMLLVPAHLAFIKLARPLIAFYNISANGILKMLRVEPKDELDATV 180 Query 177 STAELSEMIAESLSEGLLDHEEHTRLTRALRIRTRLVADVAVPLVNIRAVQVSAVGSGPT 236 ST ELSEMI ES +EGL+D EEH RLT+AL R VADV +P +R V G T Sbjct 181 STMELSEMIGESHTEGLIDEEEHRRLTQALETEGRTVADVMIPSAKMRTVPFR--DGGTT 238 Query 237 IGGVEQALAQTGYSRFPVVDRGGRFIGYLHIKDVLT-LGDN---PQTVIDLAVVRPLPRV 292 +G VE+A+ QTGYSR+PV G IGYLH+KDVL + D P+TVI + +R LP + Sbjct 239 LGAVEEAVVQTGYSRYPVRGADGALIGYLHLKDVLDRIADEAAGPETVIPRSDIRRLPLI 298 Query 293 PQSLPLADALSRMRRINSHLALVTADNGSVVGMVALEDVVEDLVGTMRDGTHR 345 +LPL DAL+R+RR NSHL V +G+V+G+VALED+VE+ VGT+RDGTHR Sbjct 299 SVTLPLDDALARLRRTNSHLGAVVDASGAVIGIVALEDLVEEFVGTVRDGTHR 351 >gi|312139819|ref|YP_004007155.1| integral membrane protein [Rhodococcus equi 103S] gi|311889158|emb|CBH48471.1| putative integral membrane protein [Rhodococcus equi 103S] Length=362 Score = 392 bits (1006), Expect = 6e-107, Method: Compositional matrix adjust. Identities = 208/353 (59%), Positives = 258/353 (74%), Gaps = 10/353 (2%) Query 1 MDVLSAVLLALLLIGANAFFVGAEFALISARRDRLEALAEQGKATAVTVIRAGEQLPAML 60 M L VLL +L+ NAFFVGAEFALI+ARRDRL+AL QGK A TVI+AGE L ML Sbjct 1 MGDLFGVLLTFVLLAGNAFFVGAEFALITARRDRLDALHAQGKKRAATVIKAGENLSLML 60 Query 61 TGAQLGVTVSSILLGRVGEPAVVKLLQLSFGLSGVPPALLH----TLSLAIVVALHVLLG 116 GAQLG+T+ SILLG+VGEPA+ L++ GVP ALLH T++L +VV LH+LLG Sbjct 61 AGAQLGITICSILLGKVGEPAIAHLIEAPMDALGVPDALLHPIAFTIALGLVVVLHILLG 120 Query 117 EMVPKNIALAGPERTAMLLVPPYLVYVRLARPFIAFYNNCANAILRLVGVQPKDELDIAV 176 EMVPKNIA+AGPE+TAMLLVP +L +++LARP IAFYN AN IL+++ V+PKDELD V Sbjct 121 EMVPKNIAIAGPEKTAMLLVPAHLAFIKLARPLIAFYNISANGILKMLRVEPKDELDATV 180 Query 177 STAELSEMIAESLSEGLLDHEEHTRLTRALRIRTRLVADVAVPLVNIRAVQVSAVGSGPT 236 ST ELSEMI ES +EGL+D EEH RLT+AL R VADV +P +R V G T Sbjct 181 STMELSEMIGESHTEGLIDEEEHRRLTQALETEGRTVADVMIPSAKMRTVPFR--DGGTT 238 Query 237 IGGVEQALAQTGYSRFPVVDRGGRFIGYLHIKDVLT-LGDN---PQTVIDLAVVRPLPRV 292 +G VE+A+ QTGYSR+PV G IGYLH+KDVL + D P+TVI + +R LP + Sbjct 239 LGAVEEAVVQTGYSRYPVRGADGALIGYLHLKDVLDRIADEAAGPETVIPRSDIRRLPLI 298 Query 293 PQSLPLADALSRMRRINSHLALVTADNGSVVGMVALEDVVEDLVGTMRDGTHR 345 +LPL DAL+R+RR NSHL V +G+V+G+VALED+VE+ VGT+RDGTHR Sbjct 299 SVTLPLDDALARLRRTNSHLGAVVDASGAVIGIVALEDLVEEFVGTVRDGTHR 351 >gi|111024191|ref|YP_707163.1| hypothetical protein RHA1_ro07241 [Rhodococcus jostii RHA1] gi|110823721|gb|ABG99005.1| probable membrane protein [Rhodococcus jostii RHA1] Length=362 Score = 388 bits (997), Expect = 6e-106, Method: Compositional matrix adjust. Identities = 206/353 (59%), Positives = 257/353 (73%), Gaps = 10/353 (2%) Query 1 MDVLSAVLLALLLIGANAFFVGAEFALISARRDRLEALAEQGKATAVTVIRAGEQLPAML 60 M L VLL +L+G NAFFVGAEFALISARRDRLEAL QGK A TVI AGE L ML Sbjct 1 MSNLFGVLLTFVLLGGNAFFVGAEFALISARRDRLEALESQGKKRARTVITAGENLSLML 60 Query 61 TGAQLGVTVSSILLGRVGEPAVVKLLQLSFGLSGVPPALLH----TLSLAIVVALHVLLG 116 AQLG+T+ SILLG+V EPA+ LL++ G+P LLH T+SLA++V LH+LLG Sbjct 61 AAAQLGITICSILLGKVAEPAIAHLLEVPLHAVGLPAGLLHPVAFTISLALIVVLHILLG 120 Query 117 EMVPKNIALAGPERTAMLLVPPYLVYVRLARPFIAFYNNCANAILRLVGVQPKDELDIAV 176 EMVPKNIALAGPERTAMLLVP +L++++LARP I+FYN CAN LRL+ V+PKDELD+ V Sbjct 121 EMVPKNIALAGPERTAMLLVPVHLLFIKLARPLISFYNLCANLTLRLLRVEPKDELDVTV 180 Query 177 STAELSEMIAESLSEGLLDHEEHTRLTRALRIRTRLVADVAVPLVNIRAVQVSAVGSGPT 236 S ELSEMI ES SEGL+D EEH RLT+AL R V++V +PL R + +S G Sbjct 181 SAVELSEMIGESRSEGLIDAEEHRRLTQALETTDRTVSEVMIPLDKARTIPLS--DGGTR 238 Query 237 IGGVEQALAQTGYSRFPVVDRGGRFIGYLHIKDVLT--LGDN--PQTVIDLAVVRPLPRV 292 +G +EQA+ +TGYSR+PV G +GYLH+KDVL L + P TVI + +RPLPR+ Sbjct 239 LGAIEQAVVETGYSRYPVRADDGSLVGYLHLKDVLDDILDEEAGPDTVIPRSDIRPLPRM 298 Query 293 PQSLPLADALSRMRRINSHLALVTADNGSVVGMVALEDVVEDLVGTMRDGTHR 345 + PLA+AL+ +RR +SHL +G +VG+VALED+VE+ VGT+RDGTHR Sbjct 299 STTTPLAEALASLRRASSHLGAAADASGQIVGIVALEDLVEEYVGTVRDGTHR 351 >gi|226366434|ref|YP_002784217.1| hypothetical protein ROP_70250 [Rhodococcus opacus B4] gi|226244924|dbj|BAH55272.1| hypothetical membrane protein [Rhodococcus opacus B4] Length=362 Score = 387 bits (993), Expect = 2e-105, Method: Compositional matrix adjust. Identities = 205/353 (59%), Positives = 257/353 (73%), Gaps = 10/353 (2%) Query 1 MDVLSAVLLALLLIGANAFFVGAEFALISARRDRLEALAEQGKATAVTVIRAGEQLPAML 60 M L VLL +L+ NAFFVGAEFALISARRDRLEAL QGK A TVI AGE L ML Sbjct 1 MSDLFGVLLTFVLLAGNAFFVGAEFALISARRDRLEALESQGKKRARTVIVAGENLSLML 60 Query 61 TGAQLGVTVSSILLGRVGEPAVVKLLQLSFGLSGVPPALLH----TLSLAIVVALHVLLG 116 AQLG+T+ SILLG+V EPA+ LL++ +G+P LLH T++LA+VV LH+LLG Sbjct 61 AAAQLGITICSILLGKVAEPAIAHLLEVPLHAAGLPAGLLHPIAFTVALALVVVLHILLG 120 Query 117 EMVPKNIALAGPERTAMLLVPPYLVYVRLARPFIAFYNNCANAILRLVGVQPKDELDIAV 176 EMVPKNIALAGPERTAMLLVP +LV+++LARP I+FYN CAN LRL+ V+PKDELD+ V Sbjct 121 EMVPKNIALAGPERTAMLLVPLHLVFIKLARPLISFYNLCANLTLRLLRVEPKDELDVTV 180 Query 177 STAELSEMIAESLSEGLLDHEEHTRLTRALRIRTRLVADVAVPLVNIRAVQVSAVGSGPT 236 S ELSEMI ES SEGL+D EEH RLT+AL R V +V +PL R + ++ G G Sbjct 181 SAVELSEMIGESRSEGLIDAEEHRRLTQALETTDRTVTEVMIPLSEARTIPLA--GGGTR 238 Query 237 IGGVEQALAQTGYSRFPVVDRGGRFIGYLHIKDVLT--LGDN--PQTVIDLAVVRPLPRV 292 +G +EQA+ +TGYSR+PV G +GYLH+KDVL L + P T+I + +RPLPR+ Sbjct 239 LGAIEQAVVETGYSRYPVRAEDGSLVGYLHLKDVLDDILDEEAGPDTLIPRSDIRPLPRM 298 Query 293 PQSLPLADALSRMRRINSHLALVTADNGSVVGMVALEDVVEDLVGTMRDGTHR 345 + PLA+AL+ +RR +SHL +G +VG+VALED+VE+ VGT+RDGTHR Sbjct 299 STTTPLAEALASLRRASSHLGAAADPSGQIVGIVALEDLVEEYVGTVRDGTHR 351 >gi|343928472|ref|ZP_08767920.1| hypothetical protein GOALK_117_00780 [Gordonia alkanivorans NBRC 16433] gi|343761657|dbj|GAA14846.1| hypothetical protein GOALK_117_00780 [Gordonia alkanivorans NBRC 16433] Length=357 Score = 384 bits (985), Expect = 1e-104, Method: Compositional matrix adjust. Identities = 208/356 (59%), Positives = 260/356 (74%), Gaps = 11/356 (3%) Query 1 MDVLSAVLLALLLIGANAFFVGAEFALISARRDRLEALAEQGKATAVTVIRAGEQLPAML 60 M L AV+LA L+G NAFFVGAEF+LISARRDRLEALAE GK+ A TVI+AGE L ML Sbjct 1 MGDLWAVVLAFALLGGNAFFVGAEFSLISARRDRLEALAESGKSRARTVIKAGENLSLML 60 Query 61 TGAQLGVTVSSILLGRVGEPAVVKLLQLSFGLSGVPPALLHTLSLAI----VVALHVLLG 116 GAQLG+T+ SILLGRVGEPAV L++ L+ VP ALLH +S AI VV LH+LLG Sbjct 61 AGAQLGITICSILLGRVGEPAVAHLIEKPLELAHVPHALLHPISFAIALSLVVVLHILLG 120 Query 117 EMVPKNIALAGPERTAMLLVPPYLVYVRLARPFIAFYNNCANAILRLVGVQPKDELDIAV 176 EMVPKNIALAGPE AMLLVP +L+++RL RP I+FYN AN LRL+ V+PKDEL+ V Sbjct 121 EMVPKNIALAGPESAAMLLVPVHLMFIRLVRPLISFYNWLANISLRLMRVEPKDELESTV 180 Query 177 STAELSEMIAESLSEGLLDHEEHTRLTRALRIRTRLVADVAVPLVNIRA--VQVSAVGS- 233 S EL++M+ ES EGL+D EEH RLTRAL+ R VA+V +PL +R+ VQVSA G Sbjct 181 SLGELAQMLGESKQEGLIDAEEHERLTRALQSIGRTVAEVMIPLEKMRSVKVQVSATGGI 240 Query 234 GPTIGGVEQALAQTGYSRFPVVDRGGRFIGYLHIKDVLT--LGDN--PQTVIDLAVVRPL 289 GPT+G VE+A+++TG+SRFPV G F GYLH+KDVL L ++ P T+I + +RPL Sbjct 241 GPTLGAVEKAVSETGFSRFPVRGSDGTFTGYLHLKDVLDEILDEHIGPDTIIGVDKIRPL 300 Query 290 PRVPQSLPLADALSRMRRINSHLALVTADNGSVVGMVALEDVVEDLVGTMRDGTHR 345 P + + PL +A + +RR +SHL V DNG +G+V L D+VE+ VG +RD THR Sbjct 301 PVIASNTPLDEATTVLRRTSSHLGAVVDDNGRTIGIVPLADLVEEFVGNVRDETHR 356 >gi|54024481|ref|YP_118723.1| hypothetical protein nfa25120 [Nocardia farcinica IFM 10152] gi|54015989|dbj|BAD57359.1| hypothetical protein [Nocardia farcinica IFM 10152] Length=354 Score = 380 bits (976), Expect = 2e-103, Method: Compositional matrix adjust. Identities = 207/353 (59%), Positives = 254/353 (72%), Gaps = 10/353 (2%) Query 1 MDVLSAVLLALLLIGANAFFVGAEFALISARRDRLEALAEQGKATAVTVIRAGEQLPAML 60 M L V L ++L+ NAFFVGAEFALISARRDRLEAL QGK A+TVI+AGE L ML Sbjct 1 MGDLFGVALTVVLLAGNAFFVGAEFALISARRDRLEALVAQGKRNAMTVIKAGENLSMML 60 Query 61 TGAQLGVTVSSILLGRVGEPAVVKLLQLSFGLSGVPPALLH----TLSLAIVVALHVLLG 116 AQLG+T+ SILLGRVGEPAV LL+ F L+G+P LLH L+L IVV LH+LLG Sbjct 61 AAAQLGITICSILLGRVGEPAVAHLLEKPFELAGLPDQLLHPVAFALALTIVVILHILLG 120 Query 117 EMVPKNIALAGPERTAMLLVPPYLVYVRLARPFIAFYNNCANAILRLVGVQPKDELDIAV 176 EM+PKNIALAGPERTA+LLVP +L+++RLARP IA YN AN LR++ ++PKDELD V Sbjct 121 EMIPKNIALAGPERTALLLVPIHLMFLRLARPLIALYNLAANLSLRMLRIEPKDELDATV 180 Query 177 STAELSEMIAESLSEGLLDHEEHTRLTRALRIRTRLVADVAVPLVNIRAVQVSAVGSGPT 236 S+ EL+EMI ES SEGLLD EEH RLT+AL R VADV VPL R+V + G+G T Sbjct 181 SSVELAEMIGESRSEGLLDEEEHRRLTQALGTSERTVADVMVPLATTRSVPLR--GNGTT 238 Query 237 IGGVEQALAQTGYSRFPVVDRGGRFIGYLHIKDVLT-LGDN---PQTVIDLAVVRPLPRV 292 +G +E A+A+TG+SR+PV G +GYLH+KDVL + D P T I +RPLP V Sbjct 239 LGDIETAVAETGFSRYPVRASDGSLVGYLHVKDVLDRVADEQAGPNTPIPRTDIRPLPTV 298 Query 293 PQSLPLADALSRMRRINSHLALVTADNGSVVGMVALEDVVEDLVGTMRDGTHR 345 PL +AL+R+RR +SHL V G+ G+VALED+VE+ VGT+RD THR Sbjct 299 GIGTPLVEALARLRRTSSHLGRVVDSRGNTCGIVALEDLVEEFVGTVRDTTHR 351 >gi|226306583|ref|YP_002766543.1| hypothetical protein RER_30960 [Rhodococcus erythropolis PR4] gi|229493490|ref|ZP_04387275.1| CBS domain protein [Rhodococcus erythropolis SK121] gi|226185700|dbj|BAH33804.1| conserved hypothetical membrane protein [Rhodococcus erythropolis PR4] gi|229319451|gb|EEN85287.1| CBS domain protein [Rhodococcus erythropolis SK121] Length=362 Score = 379 bits (973), Expect = 4e-103, Method: Compositional matrix adjust. Identities = 200/353 (57%), Positives = 257/353 (73%), Gaps = 10/353 (2%) Query 1 MDVLSAVLLALLLIGANAFFVGAEFALISARRDRLEALAEQGKATAVTVIRAGEQLPAML 60 M+ L VLL ++L+ NAFFVGAEFALISARRDRLEAL QGK A+TVI+AGE L ML Sbjct 1 MNNLFGVLLTVVLLAGNAFFVGAEFALISARRDRLEALVAQGKKRALTVIKAGENLSLML 60 Query 61 TGAQLGVTVSSILLGRVGEPAVVKLLQLSFGLSGVPPALLHTLSLAI----VVALHVLLG 116 AQLG+T+ SILLG+V EPA+ LL++ G+P LLH +S AI VV LH+LLG Sbjct 61 AAAQLGITICSILLGKVAEPAIAHLLEVPMEAVGLPDGLLHPISFAIALSLVVVLHILLG 120 Query 117 EMVPKNIALAGPERTAMLLVPPYLVYVRLARPFIAFYNNCANAILRLVGVQPKDELDIAV 176 EMVPKNIALAGPE+TAMLLVP +L ++++ARP IAFYN CAN +L+L+ V+PKDELD+ V Sbjct 121 EMVPKNIALAGPEKTAMLLVPVHLAFIKIARPIIAFYNLCANGVLKLLRVEPKDELDVTV 180 Query 177 STAELSEMIAESLSEGLLDHEEHTRLTRALRIRTRLVADVAVPLVNIRAVQVSAVGSGPT 236 S ELS MI ES SEGL+D EEH RL +AL R V++V + L +R + ++ SG T Sbjct 181 SAVELSAMIGESRSEGLIDAEEHRRLKQALESTDRTVSEVLITLDKVRTIPLTP--SGTT 238 Query 237 IGGVEQALAQTGYSRFPVVDRGGRFIGYLHIKD----VLTLGDNPQTVIDLAVVRPLPRV 292 +G +E+A+ +TGYSR+PV G GY+H+KD VL P TV+ + +RPLP V Sbjct 239 LGEIERAVIETGYSRYPVRASDGSLAGYVHLKDVLDEVLDEAAGPDTVVPTSDIRPLPIV 298 Query 293 PQSLPLADALSRMRRINSHLALVTADNGSVVGMVALEDVVEDLVGTMRDGTHR 345 P S PLA+AL+ +RR +SHL VT +G V+G+VALED++E+ VGT+RDGTHR Sbjct 299 PLSTPLAEALAGLRRASSHLGAVTDADGVVIGIVALEDLLEEYVGTVRDGTHR 351 >gi|296140021|ref|YP_003647264.1| hypothetical protein Tpau_2318 [Tsukamurella paurometabola DSM 20162] gi|296028155|gb|ADG78925.1| protein of unknown function DUF21 [Tsukamurella paurometabola DSM 20162] Length=357 Score = 376 bits (966), Expect = 3e-102, Method: Compositional matrix adjust. Identities = 204/356 (58%), Positives = 253/356 (72%), Gaps = 11/356 (3%) Query 1 MDVLSAVLLALLLIGANAFFVGAEFALISARRDRLEALAEQGKATAVTVIRAGEQLPAML 60 M+ L AV L +LL+ ANAFFV AEFALI+ARRDRLEAL +QG+ +A VI+A E L ML Sbjct 1 MNDLLAVGLTVLLLAANAFFVAAEFALIAARRDRLEALVDQGRDSARAVIKASENLSLML 60 Query 61 TGAQLGVTVSSILLGRVGEPAVVKLLQLSFGLSGVPPALLH----TLSLAIVVALHVLLG 116 QLG+T+ SILLG+VGEPA+ LL+ + VP ALLH T+SL++VV LH+LLG Sbjct 61 AACQLGITICSILLGKVGEPAIAHLLEKPMEWANVPEALLHPISFTISLSLVVVLHILLG 120 Query 117 EMVPKNIALAGPERTAMLLVPPYLVYVRLARPFIAFYNNCANAILRLVGVQPKDELDIAV 176 EMVPKNIALAGPE AMLLVPP + + +L RP IA YN A +LR +GV+P+DEL+ + Sbjct 121 EMVPKNIALAGPESAAMLLVPPLVAFSKLMRPVIAVYNWLATLVLRALGVEPRDELEGTI 180 Query 177 STAELSEMIAESLSEGLLDHEEHTRLTRALRIRTRLVADVAVPLVNIRAVQ-VSAVGS-- 233 S ELSE+IAES EGL+D EE RLTRAL+ R VADVA+PL IR +Q V+ G Sbjct 181 SAGELSELIAESHDEGLIDAEEQLRLTRALQTSRRTVADVAIPLAQIRGLQAVAGPGGTY 240 Query 234 GPTIGGVEQALAQTGYSRFPVVDRGGRFIGYLHIKDVL----TLGDNPQTVIDLAVVRPL 289 GPT+G +E A+A+TG+SR+PV RGG F GYLH+KDVL P TVI +RPL Sbjct 241 GPTLGDIESAVAETGFSRYPVRSRGGAFTGYLHVKDVLPDIMDASVGPDTVIGAGRIRPL 300 Query 290 PRVPQSLPLADALSRMRRINSHLALVTADNGSVVGMVALEDVVEDLVGTMRDGTHR 345 P V +L L A S +RR+ HLA V D+G +G+VALEDVVE+ VGT+RDGTHR Sbjct 301 PVVDGALSLDQATSHLRRLGGHLAAVADDHGRTIGIVALEDVVEEFVGTVRDGTHR 356 >gi|333920795|ref|YP_004494376.1| hypothetical protein AS9A_3131 [Amycolicicoccus subflavus DQS3-9A1] gi|333483016|gb|AEF41576.1| putative membrane protein [Amycolicicoccus subflavus DQS3-9A1] Length=352 Score = 369 bits (947), Expect = 4e-100, Method: Compositional matrix adjust. Identities = 199/352 (57%), Positives = 249/352 (71%), Gaps = 11/352 (3%) Query 2 DVLSAVLLALLLIGANAFFVGAEFALISARRDRLEALAEQGKATAVTVIRAGEQLPAMLT 61 D+L+ L+ LLL+G N FFVGAEFALISARRDRLEAL EQG A TVIRAGEQL ML Sbjct 3 DLLAIGLMVLLLLG-NGFFVGAEFALISARRDRLEALDEQGHKRAQTVIRAGEQLSRMLA 61 Query 62 GAQLGVTVSSILLGRVGEPAVVKLLQLSFGLSGVPPALLH----TLSLAIVVALHVLLGE 117 GAQLG+T+ SILLGRV EPA+ L++ GVP ALLH T++LAIVV LH+L+GE Sbjct 62 GAQLGITICSILLGRVAEPAIAHLIETPLEAVGVPGALLHPIAFTIALAIVVVLHILVGE 121 Query 118 MVPKNIALAGPERTAMLLVPPYLVYVRLARPFIAFYNNCANAILRLVGVQPKDELDIAVS 177 MVPKNIA+AGPERTAMLLVP ++ RL P I YN ANA LRL GV+P+DELD AVS Sbjct 122 MVPKNIAIAGPERTAMLLVPAHVFATRLMSPLITLYNYLANATLRLFGVEPRDELDSAVS 181 Query 178 TAELSEMIAESLSEGLLDHEEHTRLTRALRIRTRLVADVAVPLVNIRAVQVSAVGSGPTI 237 EL++MI ES SEGLLD +EH RL R LR R VADV +P+ +R + + G T+ Sbjct 182 VRELADMIRESRSEGLLDEDEHRRLARTLRTAGRTVADVLIPVSRVRGLPLQ--DGGTTL 239 Query 238 GGVEQALAQTGYSRFPVVDRGGRFIGYLHIKD----VLTLGDNPQTVIDLAVVRPLPRVP 293 G +E+A+A TG+SR+P+ D G ++GYLH+KD V+ P TVI ++RPLP +P Sbjct 240 GAIEKAVADTGFSRYPIADEAGEYVGYLHLKDALDAVIDESAGPATVIPRDLIRPLPAMP 299 Query 294 QSLPLADALSRMRRINSHLALVTADNGSVVGMVALEDVVEDLVGTMRDGTHR 345 + PL +AL+ +R +SHL V G VG+VALED++E+ VG +RD THR Sbjct 300 GNTPLDEALAVLRLDSSHLGKVVTSTGRTVGIVALEDLLEEFVGRVRDSTHR 351 >gi|262202668|ref|YP_003273876.1| hypothetical protein Gbro_2765 [Gordonia bronchialis DSM 43247] gi|262086015|gb|ACY21983.1| protein of unknown function DUF21 [Gordonia bronchialis DSM 43247] Length=358 Score = 366 bits (940), Expect = 3e-99, Method: Compositional matrix adjust. Identities = 202/357 (57%), Positives = 250/357 (71%), Gaps = 12/357 (3%) Query 1 MDVLSAVLLALLLIGANAFFVGAEFALISARRDRLEALAEQGKATAVTVIRAGEQLPAML 60 MD L AV+LA+ L+ NAFFVGAEF+LISARRDRLEAL + GK A TVIRAGE+L ML Sbjct 1 MDDLWAVVLAVFLLAGNAFFVGAEFSLISARRDRLEALEQSGKKRARTVIRAGERLSLML 60 Query 61 TGAQLGVTVSSILLGRVGEPAVVKLLQLSFGLSGVPPALLHTLSLAI----VVALHVLLG 116 GAQLG+T+ SILLGRVGEPAV L++ L VP ALLH +S AI VV LH+L+G Sbjct 61 AGAQLGITICSILLGRVGEPAVAHLIEAPLDLVAVPDALLHPISFAIALALVVVLHILIG 120 Query 117 EMVPKNIALAGPERTAMLLVPPYLVYVRLARPFIAFYNNCANAILRLVGVQPKDELDIAV 176 EMVPKNIALAGPE AMLLVP +L ++RL RP I FYN AN LR + V+PKDEL V Sbjct 121 EMVPKNIALAGPETAAMLLVPVHLAFIRLTRPLIGFYNWLANISLRAMRVEPKDELTSTV 180 Query 177 STAELSEMIAESLSEGLLDHEEHTRLTRALRIRTRLVADVAVPLVNIR--AVQVSAV--G 232 S EL++M++ES EGL+D EEH RLTR L+ R V +V +PL +R AV+V A G Sbjct 181 SPGELAQMLSESKQEGLIDAEEHERLTRTLQSVNRTVDEVMIPLDRMRSVAVEVDAETGG 240 Query 233 SGPTIGGVEQALAQTGYSRFPVVDRGGRFIGYLHIKDVLT--LGD--NPQTVIDLAVVRP 288 +GPT+G VE+A+ TG+SRFPV G F GYLH+KDVL L + P T+I + +RP Sbjct 241 AGPTLGAVERAVTDTGFSRFPVRGPDGTFTGYLHLKDVLDEILDERIGPDTIIGIDKIRP 300 Query 289 LPRVPQSLPLADALSRMRRINSHLALVTADNGSVVGMVALEDVVEDLVGTMRDGTHR 345 LP + + L +A +RR +SHL V +NG VG+VAL D+VE+ VG +RD THR Sbjct 301 LPVIASTTELDEATGALRRTSSHLGAVVDENGRTVGVVALADLVEEFVGNVRDETHR 357 >gi|13539567|emb|CAC35699.1| putative integral membrane protein [Rhodococcus fascians D188] Length=380 Score = 349 bits (895), Expect = 4e-94, Method: Compositional matrix adjust. Identities = 186/339 (55%), Positives = 243/339 (72%), Gaps = 10/339 (2%) Query 17 NAFFVGAEFALISARRDRLEALAEQGKATAVTVIRAGEQLPAMLTGAQLGVTVSSILLGR 76 NAFFVGAEFALISARRDRLEAL QGK A +VI AG+ L ML AQLG+T+ SILLGR Sbjct 17 NAFFVGAEFALISARRDRLEALLAQGKKRAQSVIEAGQNLSQMLAAAQLGITICSILLGR 76 Query 77 VGEPAVVKLLQLSFGLSGVPPALLHTLSLAI----VVALHVLLGEMVPKNIALAGPERTA 132 V EPAV L+++ L G+P + LH ++ AI VV LH+L+GEMVPKNIA+AGPE TA Sbjct 77 VAEPAVAHLIEVPLELVGIPGSFLHPIAFAIALTLVVVLHILVGEMVPKNIAIAGPESTA 136 Query 133 MLLVPPYLVYVRLARPFIAFYNNCANAILRLVGVQPKDELDIAVSTAELSEMIAESLSEG 192 M+LVP +L++++ I+FYN CAN LR++ ++PKDEL +VS ELS+MI ES SEG Sbjct 137 MVLVPIHLMFIQGGVALISFYNLCANLTLRMLRIEPKDELSSSVSAVELSQMIGESRSEG 196 Query 193 LLDHEEHTRLTRALRIRTRLVADVAVPLVNIRAVQVSAVGS--GPTIGGVEQALAQTGYS 250 L+D EEH RL +AL R VA+V +P +R++++S GPT+G VE+A+ +TG+S Sbjct 197 LIDAEEHRRLRQALETSGRTVAEVLIPSHQVRSIELSGPDHTLGPTLGSVERAVIETGFS 256 Query 251 RFPVVDRGGRFIGYLHIKDVL-TLGDN---PQTVIDLAVVRPLPRVPQSLPLADALSRMR 306 R+PV D G +GYLH+KDVL + D+ P+TVI + VR LP V L DAL+++R Sbjct 257 RYPVRDASGSLVGYLHLKDVLDDMADDSAGPETVIPRSDVRALPVVSIDTVLDDALTKLR 316 Query 307 RINSHLALVTADNGSVVGMVALEDVVEDLVGTMRDGTHR 345 R +SHL V G+ VG+VALED+VE+ VGT+RDGTHR Sbjct 317 RASSHLGAVHDATGATVGIVALEDLVEEFVGTVRDGTHR 355 >gi|326384956|ref|ZP_08206630.1| hypothetical protein SCNU_18517 [Gordonia neofelifaecis NRRL B-59395] gi|326196346|gb|EGD53546.1| hypothetical protein SCNU_18517 [Gordonia neofelifaecis NRRL B-59395] Length=358 Score = 338 bits (868), Expect = 6e-91, Method: Compositional matrix adjust. Identities = 187/357 (53%), Positives = 243/357 (69%), Gaps = 12/357 (3%) Query 1 MDVLSAVLLALLLIGANAFFVGAEFALISARRDRLEALAEQGKATAVTVIRAGEQLPAML 60 M +LL ++L+ ANAFFV EF+LI+ARRDRL AL E GK A TVI A E L ML Sbjct 1 MGDWWGILLTVVLLAANAFFVAGEFSLIAARRDRLMALEESGKKRARTVIEASEHLSLML 60 Query 61 TGAQLGVTVSSILLGRVGEPAVVKLLQLSFGLSGVPPALLHTLS----LAIVVALHVLLG 116 G+QLG+T+ SILLGRV EPA+ L+ VP LLH ++ LAIVV LH+L+G Sbjct 61 AGSQLGITICSILLGRVAEPAIAHLISAPLEFLHVPSELLHPIAFAVGLAIVVVLHILMG 120 Query 117 EMVPKNIALAGPERTAMLLVPPYLVYVRLARPFIAFYNNCANAILRLVGVQPKDELDIAV 176 EMVPKNIALAGPE AML+VP +LV++R+ARP I FYN AN LR +GV+PKDEL V Sbjct 121 EMVPKNIALAGPETVAMLVVPVHLVFMRIARPLIWFYNALANISLRAMGVEPKDELASTV 180 Query 177 STAELSEMIAESLSEGLLDHEEHTRLTRALRIRTRLVADVAVPLVNIRAVQV----SAVG 232 + AEL++MI ES GLLD +EH RLTRAL R VA++ +PL +R+V+V + G Sbjct 181 NEAELADMIGESRELGLLDADEHERLTRALTTVERTVAELMIPLTTVRSVRVQLDAATGG 240 Query 233 SGPTIGGVEQALAQTGYSRFPVVDRGGRFIGYLHIKDVLT--LGDN--PQTVIDLAVVRP 288 GP +G VE+A+ +TGYSRFPV G IGYLHIKDVL L ++ P+++I + +RP Sbjct 241 LGPRLGSVERAVRETGYSRFPVRGLDGSLIGYLHIKDVLDDILDESVGPESLIGVDQIRP 300 Query 289 LPRVPQSLPLADALSRMRRINSHLALVTADNGSVVGMVALEDVVEDLVGTMRDGTHR 345 LP+V + PL +A +RR ++HL V G++VG++AL D+ E VG +RD THR Sbjct 301 LPKVDATTPLDEAAVVLRRSSAHLGAVVDGAGAIVGVIALADLAEAFVGDLRDSTHR 357 >gi|300786851|ref|YP_003767142.1| CBS domain-containing protein [Amycolatopsis mediterranei U32] gi|299796365|gb|ADJ46740.1| CBS domain-containing protein [Amycolatopsis mediterranei U32] gi|340528337|gb|AEK43542.1| CBS domain-containing protein [Amycolatopsis mediterranei S699] Length=347 Score = 333 bits (855), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 179/348 (52%), Positives = 239/348 (69%), Gaps = 11/348 (3%) Query 2 DVLSAVLLALLLIGANAFFVGAEFALISARRDRLEALAEQGKATAVTVIRAGEQLPAMLT 61 D L+ L+ +LL+ ANAFFVGAEF LIS+RRDRLEAL EQGK A VI A + + ML Sbjct 3 DWLNIALVVVLLL-ANAFFVGAEFTLISSRRDRLEALLEQGKTRAQIVINASKHVSLMLA 61 Query 62 GAQLGVTVSSILLGRVGEPAVVKLLQLSFGLSGVPPALLHTLSLAIVVAL----HVLLGE 117 GAQLG+T+ S+LLGR+GEPA+ L +F L G+P ALLH +S AI +A HVL+GE Sbjct 62 GAQLGITICSLLLGRLGEPAIAHRLSAAFDLLGLPQALLHPISFAIALAFITVAHVLIGE 121 Query 118 MVPKNIALAGPERTAMLLVPPYLVYVRLARPFIAFYNNCANAILRLVGVQPKDELDIAVS 177 MVPKN+A+A PER A+ LVP ++ +V+LARPFI N AN++LR V+PKDEL+ A + Sbjct 122 MVPKNLAIAEPERLALWLVPAHVGWVKLARPFIWLLNFVANSLLRAFRVEPKDELETAYT 181 Query 178 TAELSEMIAESLSEGLLDHEEHTRLTRALRIRTRLVADVAVPLVNIRAVQVSAVGSGPTI 237 + EL+E+++ES EGLLD EH RL + L + VADV VP +++ + GPT+ Sbjct 182 SDELAELLSESRREGLLDQSEHQRLAQTLSSVQKTVADVLVP-----TAELTTLPCGPTV 236 Query 238 GGVEQALAQTGYSRFPVVDRGGRFIGYLHIKDVLTL-GDNPQTVIDLAVVRPLPRVPQSL 296 G VE+A++ TG+SRFPV GR GY+H+KD+L L G +P+T + + R L + Sbjct 237 GEVEKAVSSTGFSRFPVCTDDGRLTGYIHVKDILDLAGQDPKTTVPASKTRALTELRADA 296 Query 297 PLADALSRMRRINSHLALVTADNGSVVGMVALEDVVEDLVGTMRDGTH 344 L ALS MR+ SHLA +G+ VG+VALED+VE+ VGT+RDGTH Sbjct 297 RLDVALSAMRKERSHLARALDADGNAVGVVALEDLVEEYVGTVRDGTH 344 >gi|302527134|ref|ZP_07279476.1| CBS domain-containing protein [Streptomyces sp. AA4] gi|302436029|gb|EFL07845.1| CBS domain-containing protein [Streptomyces sp. AA4] Length=347 Score = 333 bits (853), Expect = 3e-89, Method: Compositional matrix adjust. Identities = 183/348 (53%), Positives = 240/348 (69%), Gaps = 11/348 (3%) Query 2 DVLSAVLLALLLIGANAFFVGAEFALISARRDRLEALAEQGKATAVTVIRAGEQLPAMLT 61 D L+ L+ +LL+ ANAFFVGAEF LIS+RRDRLEAL EQGK A VI A + + ML Sbjct 3 DWLNIALVVVLLL-ANAFFVGAEFTLISSRRDRLEALLEQGKTRAQIVINASKHVSQMLA 61 Query 62 GAQLGVTVSSILLGRVGEPAVVKLLQLSFGLSGVPPALLHTLSLAIVVA----LHVLLGE 117 GAQLG+T+ S+LLGR+GEPAV L F L G+P LLH +S A+ +A LHVL+GE Sbjct 62 GAQLGITICSLLLGRLGEPAVAHRLSGFFDLLGLPDQLLHPISFALALAFITMLHVLIGE 121 Query 118 MVPKNIALAGPERTAMLLVPPYLVYVRLARPFIAFYNNCANAILRLVGVQPKDELDIAVS 177 MVPKN+A+A PER A+ LVP ++ +V++A P IAF N AN++LRL+ V+PKDEL+ A S Sbjct 122 MVPKNLAIAEPERLALWLVPVHVAWVKVANPVIAFLNFVANSLLRLMKVEPKDELETAYS 181 Query 178 TAELSEMIAESLSEGLLDHEEHTRLTRALRIRTRLVADVAVPLVNIRAVQVSAVGSGPTI 237 + EL+E+++ES EGLLD EH RL++ L + VADV VP +++ + GPT+ Sbjct 182 SDELAELLSESRQEGLLDQSEHQRLSQTLSSVAKTVADVLVP-----TSELTTLPCGPTL 236 Query 238 GGVEQALAQTGYSRFPVVDRGGRFIGYLHIKDVLTL-GDNPQTVIDLAVVRPLPRVPQSL 296 G VE+A++ TG+SRFPV G GY+H+KDVL L G +P TVI RPL + Sbjct 237 GDVERAVSTTGFSRFPVCTDDGSLTGYIHVKDVLDLVGQDPGTVIPDDKTRPLTELRSDA 296 Query 297 PLADALSRMRRINSHLALVTADNGSVVGMVALEDVVEDLVGTMRDGTH 344 L ALS MR+ SHLA +G+ VG+VALED+VE+ VGT+RDGTH Sbjct 297 RLDVALSAMRKEGSHLARALDASGAAVGVVALEDLVEEYVGTVRDGTH 344 >gi|339294776|gb|AEJ46887.1| conserved hypothetical membrane protein [Mycobacterium tuberculosis CCDC5079] Length=162 Score = 322 bits (824), Expect = 7e-86, Method: Compositional matrix adjust. Identities = 162/162 (100%), Positives = 162/162 (100%), Gaps = 0/162 (0%) Query 184 MIAESLSEGLLDHEEHTRLTRALRIRTRLVADVAVPLVNIRAVQVSAVGSGPTIGGVEQA 243 MIAESLSEGLLDHEEHTRLTRALRIRTRLVADVAVPLVNIRAVQVSAVGSGPTIGGVEQA Sbjct 1 MIAESLSEGLLDHEEHTRLTRALRIRTRLVADVAVPLVNIRAVQVSAVGSGPTIGGVEQA 60 Query 244 LAQTGYSRFPVVDRGGRFIGYLHIKDVLTLGDNPQTVIDLAVVRPLPRVPQSLPLADALS 303 LAQTGYSRFPVVDRGGRFIGYLHIKDVLTLGDNPQTVIDLAVVRPLPRVPQSLPLADALS Sbjct 61 LAQTGYSRFPVVDRGGRFIGYLHIKDVLTLGDNPQTVIDLAVVRPLPRVPQSLPLADALS 120 Query 304 RMRRINSHLALVTADNGSVVGMVALEDVVEDLVGTMRDGTHR 345 RMRRINSHLALVTADNGSVVGMVALEDVVEDLVGTMRDGTHR Sbjct 121 RMRRINSHLALVTADNGSVVGMVALEDVVEDLVGTMRDGTHR 162 >gi|227542028|ref|ZP_03972077.1| HCC family HlyC/CorC transporter [Corynebacterium glucuronolyticum ATCC 51866] gi|227182176|gb|EEI63148.1| HCC family HlyC/CorC transporter [Corynebacterium glucuronolyticum ATCC 51866] Length=347 Score = 319 bits (818), Expect = 4e-85, Method: Compositional matrix adjust. Identities = 169/354 (48%), Positives = 240/354 (68%), Gaps = 16/354 (4%) Query 1 MDVLSAVLLALLLIGANAFFVGAEFALISARRDRLEALAEQGKATAVTVIRAGEQLPAML 60 M + +A LL ++L+ NAFFVG EFALIS+R+DRLE L QG A TV+ A E L ML Sbjct 1 MSIWTASLLIIVLLLFNAFFVGGEFALISSRKDRLETLVSQGNHRARTVLDAMEHLSLML 60 Query 61 TGAQLGVTVSSILLGRVGEPAVVKLLQLSFGLSGVPPALLHTLSLAI----VVALHVLLG 116 AQLGVT++S++LG++GEPA+ LL+ F +PP LLH LS AI + LH+LLG Sbjct 61 AAAQLGVTIASLILGKLGEPAIAHLLERPFAAMAIPPDLLHPLSFAISLFIITFLHILLG 120 Query 117 EMVPKNIALAGPERTAMLLVPPYLVYVRLARPFIAFYNNCANAILRLVGVQPKDELDIAV 176 EMVPKN+A+AGPE TA++LVPP + + ++ RPFI F N A L+ G++ KDELD V Sbjct 121 EMVPKNLAIAGPESTALILVPPLIAFEKITRPFIHFVNWIARMTLKAFGIEQKDELDSTV 180 Query 177 STAELSEMIAESLSEGLLDHEEHTRLTRALRIRTRLVADVAVPLVNIRAVQVSAVGSGPT 236 ++ L+ MIAES SEGL+D EEH RL +AL R V ++ +PL + +V ++ PT Sbjct 181 DSSSLAAMIAESRSEGLIDAEEHVRLKKALGAARRRVKELCIPLDKVISVPLN-----PT 235 Query 237 IGGVEQALAQTGYSRFPVVDRGGRFIGYLHIKDVLT--LGDNP---QTVIDLAVVRPLPR 291 + +E A+A+TG+SRFPV G F+GY+H+KDVL + ++P +I+ + +R L Sbjct 236 VKQLEAAVAETGFSRFPVRSTTG-FVGYIHVKDVLEKMVSEDPGAEDEIIERSEIRSLKV 294 Query 292 VPQSLPLADALSRMRRINSHLALVTADNGSVVGMVALEDVVEDLVGTMRDGTHR 345 + + P+ DAL +RR +H+ L+T +NG ++GMVALED++E+ VGT+RD TH Sbjct 295 MDAATPMDDALRILRRDRAHMGLIT-ENGKILGMVALEDLIEEYVGTVRDWTHE 347 >gi|237785467|ref|YP_002906172.1| HlyC/CorC family transporter [Corynebacterium kroppenstedtii DSM 44385] gi|237758379|gb|ACR17629.1| transporter of the HlyC/CorC family [Corynebacterium kroppenstedtii DSM 44385] Length=352 Score = 316 bits (810), Expect = 3e-84, Method: Compositional matrix adjust. Identities = 174/349 (50%), Positives = 231/349 (67%), Gaps = 11/349 (3%) Query 4 LSAVLLALLLIGANAFFVGAEFALISARRDRLEALAEQGKATAVTVIRAGEQLPAMLTGA 63 L A++ AL LI NAFFVGAEFALIS+R+DRLE++ E G A A VI A E L L GA Sbjct 5 LWALVFALFLIALNAFFVGAEFALISSRKDRLESILESGDARARAVINATEHLSMNLAGA 64 Query 64 QLGVTVSSILLGRVGEPAVVKLLQLSFGLSGVPPALLH----TLSLAIVVALHVLLGEMV 119 Q GVT++S+LLG+VGEPAV L++ GVP LLH L+L +V LH++LGEMV Sbjct 65 QFGVTIASLLLGKVGEPAVSHLIETPAAALGVPDGLLHPIGFALALLLVSILHIILGEMV 124 Query 120 PKNIALAGPERTAMLLVPPYLVYVRLARPFIAFYNNCANAILRLVGVQPKDELDIAVSTA 179 PKNIALAGPE AM LVP ++++V++ RP I F+N A L VG+ KDELD VS + Sbjct 125 PKNIALAGPENVAMWLVPIHVMFVKITRPIILFFNWVARITLAAVGITQKDELDTTVSPS 184 Query 180 ELSEMIAESLSEGLLDHEEHTRLTRALRIRTRLVADVAVPLVNIRAVQVSAVGSGPTIGG 239 EL+ MI++S EGL+D EEH+RL +AL R + +V +P +R V + GSGP +G Sbjct 185 ELARMISDSRQEGLIDAEEHSRLNKALASPRRHIDEVLIPADEVRTVPLR--GSGPMMGD 242 Query 240 VEQALAQTGYSRFPVVDRGGRFIGYLHIKDVLTL----GDNPQTVIDLAVVRPLPRVPQS 295 VE+A+A TG+SRFPV R G ++GY+H+KD+L +P+TV+ +RPL S Sbjct 243 VEKAVADTGFSRFPVTGRDGTYLGYVHVKDILDREIPPHSDPETVLARREIRPLITFSPS 302 Query 296 LPLADALSRMRRINSHLALVTADNGSVVGMVALEDVVEDLVGTMRDGTH 344 P+ AL MR + H+A V D G G+V LED++E+ VGT+RD TH Sbjct 303 TPMDQALRLMRGRSRHIAQVV-DGGHQYGIVTLEDLIEEYVGTVRDSTH 350 >gi|227488979|ref|ZP_03919295.1| HCC family HlyC/CorC transporter [Corynebacterium glucuronolyticum ATCC 51867] gi|227091055|gb|EEI26367.1| HCC family HlyC/CorC transporter [Corynebacterium glucuronolyticum ATCC 51867] Length=347 Score = 316 bits (809), Expect = 4e-84, Method: Compositional matrix adjust. Identities = 168/354 (48%), Positives = 239/354 (68%), Gaps = 16/354 (4%) Query 1 MDVLSAVLLALLLIGANAFFVGAEFALISARRDRLEALAEQGKATAVTVIRAGEQLPAML 60 M + +A LL ++L+ NAFFVG EFALIS+R+DRLE L QG A TV+ A E L ML Sbjct 1 MSIWTASLLIIVLLLFNAFFVGGEFALISSRKDRLETLVSQGNHRARTVLDAMEHLSLML 60 Query 61 TGAQLGVTVSSILLGRVGEPAVVKLLQLSFGLSGVPPALLHTLSLAI----VVALHVLLG 116 AQLGVT++S++LG++GEPA+ LL+ F +P LLH LS AI + LH+LLG Sbjct 61 AAAQLGVTIASLILGKLGEPAIAHLLERPFAAMAIPADLLHPLSFAISLFIITFLHILLG 120 Query 117 EMVPKNIALAGPERTAMLLVPPYLVYVRLARPFIAFYNNCANAILRLVGVQPKDELDIAV 176 EMVPKN+A+AGPE TA++LVPP + + ++ RPFI F N A L+ G++ KDELD V Sbjct 121 EMVPKNLAIAGPESTALILVPPLIAFEKITRPFIHFVNWIARMTLKAFGIEQKDELDSTV 180 Query 177 STAELSEMIAESLSEGLLDHEEHTRLTRALRIRTRLVADVAVPLVNIRAVQVSAVGSGPT 236 ++ L+ MIAES SEGL+D EEH RL +AL R V ++ +PL + +V ++ PT Sbjct 181 DSSSLAAMIAESRSEGLIDAEEHVRLKKALGAARRRVKELCIPLDKVISVPLN-----PT 235 Query 237 IGGVEQALAQTGYSRFPVVDRGGRFIGYLHIKDVLT--LGDNP---QTVIDLAVVRPLPR 291 + +E A+A+TG+SRFPV G F+GY+H+KDVL + ++P +I+ + +R L Sbjct 236 VKQLEAAVAETGFSRFPVRSTTG-FVGYIHVKDVLEKMVSEDPGAEDEIIERSEIRSLKV 294 Query 292 VPQSLPLADALSRMRRINSHLALVTADNGSVVGMVALEDVVEDLVGTMRDGTHR 345 + + P+ DAL +RR +H+ L+T +NG ++GMVALED++E+ VGT+RD TH Sbjct 295 MDAATPMDDALRILRRDRAHMGLIT-ENGKILGMVALEDLIEEYVGTVRDWTHE 347 >gi|256379351|ref|YP_003103011.1| hypothetical protein Amir_5345 [Actinosynnema mirum DSM 43827] gi|255923654|gb|ACU39165.1| protein of unknown function DUF21 [Actinosynnema mirum DSM 43827] Length=348 Score = 315 bits (807), Expect = 6e-84, Method: Compositional matrix adjust. Identities = 169/343 (50%), Positives = 237/343 (70%), Gaps = 11/343 (3%) Query 7 VLLALLLIGANAFFVGAEFALISARRDRLEALAEQGKATAVTVIRAGEQLPAMLTGAQLG 66 +++ +L+G NAFFVGAEFALISARRDRLE++ E+G A A VI+A ++ ML GAQLG Sbjct 7 LVMTFVLLGCNAFFVGAEFALISARRDRLESMVERGVARAALVIKASREVSLMLAGAQLG 66 Query 67 VTVSSILLGRVGEPAVVKLLQLSFGLSGVPPALLHTLSLAI----VVALHVLLGEMVPKN 122 +T+ S+LLGR+GEPAV L++ + +PP +LH +S AI VV H+LLGEMVPKN Sbjct 67 ITICSLLLGRLGEPAVAHLIEGALHPLSIPPVVLHGVSFAIAMMLVVVAHILLGEMVPKN 126 Query 123 IALAGPERTAMLLVPPYLVYVRLARPFIAFYNNCANAILRLVGVQPKDELDIAVSTAELS 182 +A+A PER A+ LVP ++ ++++ RPFI+ +N AN +LRL+ V+PKDEL+ A ++ ELS Sbjct 127 LAIANPERLAIWLVPVHVAFIKVVRPFISLFNIAANGVLRLMKVEPKDELESAYTSDELS 186 Query 183 EMIAESLSEGLLDHEEHTRLTRALRIRTRLVADVAVPLVNIRAVQVSAVGSGPTIGGVEQ 242 +I++S EGLL+ EH RL + L R VADV VPL +V+++ + PT+ +E Sbjct 187 LLISQSRQEGLLEDSEHRRLAQTLSSAERTVADVLVPL-----DRVTSLSARPTMAEIES 241 Query 243 ALAQTGYSRFPVVDRGGRFIGYLHIKDVLTLGDNPQ-TVIDLAVVRPLPRVPQSLPLADA 301 A+A+TG+SRFPV +GYLH+KDVL L + + + VR LP VP L +A Sbjct 242 AVAETGFSRFPVRSTDD-LVGYLHVKDVLDLAEAGEGATVPSGRVRGLPEVPVGARLDEA 300 Query 302 LSRMRRINSHLALVTADNGSVVGMVALEDVVEDLVGTMRDGTH 344 L+ +RR SHLA +G+ G+VALED+VE+ VGT+RDGTH Sbjct 301 LASLRRSQSHLAKAVGPDGATRGVVALEDLVEEYVGTVRDGTH 343 >gi|334563435|ref|ZP_08516426.1| hypothetical protein CbovD2_02585 [Corynebacterium bovis DSM 20582] Length=352 Score = 310 bits (794), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 170/351 (49%), Positives = 228/351 (65%), Gaps = 11/351 (3%) Query 2 DVLSAVLLALLLIGANAFFVGAEFALISARRDRLEALAEQGKATAVTVIRAGEQLPAMLT 61 DV+ AVL ++L+ NA+FVG EFALIS+RRDRL+ + G A V+ A E L ML Sbjct 3 DVVWAVLFTVVLLAMNAYFVGVEFALISSRRDRLDGMIAAGNRRARKVLYATEHLTIMLA 62 Query 62 GAQLGVTVSSILLGRVGEPAVVKLLQLSFGLSGVPPALLH----TLSLAIVVALHVLLGE 117 GAQ G+T++S+LLG+VGEPA+ L++ F G+PP LLH T++L +V LH++LGE Sbjct 63 GAQFGITLASVLLGKVGEPAIAHLVEGPFSALGLPPDLLHPVSFTIALLLVTVLHIILGE 122 Query 118 MVPKNIALAGPERTAMLLVPPYLVYVRLARPFIAFYNNCANAILRLVGVQPKDELDIAVS 177 MVPKNIALAGPE A LV P+L++ + P + F N A LR VGV+ KDELD VS Sbjct 123 MVPKNIALAGPESVATYLVGPHLLFCTVTHPIMVFLNWIARIALRAVGVEQKDELDSTVS 182 Query 178 TAELSEMIAESLSEGLLDHEEHTRLTRALRIRTRLVADVAVPLVNIRAVQVSAVGSGPTI 237 +AEL+ MIAES SEGL++ E RL+ AL R + +V +P +R++ G T+ Sbjct 183 SAELASMIAESRSEGLINPAEAKRLSNALASSRRTLNEVLIPTARVRSLPFGT--RGVTV 240 Query 238 GGVEQALAQTGYSRFPVVDRGGRFIGYLHIKDVLTL----GDNPQTVIDLAVVRPLPRVP 293 G VEQA+A+TG+SRFPV D G +IGY+H+KD+L G +P T+I +RPL V Sbjct 241 GQVEQAVAETGFSRFPVTDSAGGYIGYVHVKDILDAILDPGTDPSTLIPRTAIRPLIEVE 300 Query 294 QSLPLADALSRMRRINSHLALVTADNGSVVGMVALEDVVEDLVGTMRDGTH 344 A+ MR SH+A V D G V G+V LED++E+LVGT+RD TH Sbjct 301 GGQNFDRAMRHMRVRTSHMAQVVED-GRVTGVVTLEDIIEELVGTVRDWTH 350 >gi|331696976|ref|YP_004333215.1| hypothetical protein Psed_3166 [Pseudonocardia dioxanivorans CB1190] gi|326951665|gb|AEA25362.1| protein of unknown function DUF21 [Pseudonocardia dioxanivorans CB1190] Length=350 Score = 309 bits (792), Expect = 3e-82, Method: Compositional matrix adjust. Identities = 180/330 (55%), Positives = 233/330 (71%), Gaps = 10/330 (3%) Query 19 FFVGAEFALISARRDRLEALAEQGKATAVTVIRAGEQLPAMLTGAQLGVTVSSILLGRVG 78 FFVGAEFALISARRDRLEA+A G A A TV+ A L ML +QLG+T++S+LLGR+G Sbjct 20 FFVGAEFALISARRDRLEAMAHAGDAAARTVLAASADLSRMLAASQLGITIASLLLGRLG 79 Query 79 EPAVVKLLQLSFGLSGVPPALLH----TLSLAIVVALHVLLGEMVPKNIALAGPERTAML 134 EPAV L++ F L G+P LLH LSLAIVV H++LGEMVPKNIA+AGPERTA L Sbjct 80 EPAVAHLIERPFDLLGLPEGLLHPIAFALSLAIVVVAHMVLGEMVPKNIAIAGPERTAAL 139 Query 135 LVPPYLVYVRLARPFIAFYNNCANAILRLVGVQPKDELDIAVSTAELSEMIAESLSEGLL 194 LVPP+LV+ R+A PF++ +N AN++LRL+ ++P+DEL+ A ++ EL+EMI++S EGLL Sbjct 140 LVPPFLVWTRVASPFVSAFNWMANSVLRLLRIEPRDELEAAFTSGELAEMISDSRREGLL 199 Query 195 DHEEHTRLTRALRIRTRLVADVAVPLVNIRAVQVSAVGSGPTIGGVEQALAQTGYSRFPV 254 D EE +RL R L VADV VPL + V +SA PT+G V +A+TGYSRFP Sbjct 200 DDEESSRLARTLHSAEATVADVVVPLDEL--VTLSA---RPTVGEVAAVVAETGYSRFP- 253 Query 255 VDRGGRFIGYLHIKDVLTLGDNPQTVIDLAVVRPLPRVPQSLPLADALSRMRRINSHLAL 314 + GR IGYLH+KD+L + D+P V+ + VR LP VP L +AL+ +R +HLA Sbjct 254 LRADGRLIGYLHVKDILDVVDDPAAVVPGSRVRGLPEVPADARLDEALAALRSARAHLAR 313 Query 315 VTADNGSVVGMVALEDVVEDLVGTMRDGTH 344 GS VG+VA+ED+VE VGT+RD TH Sbjct 314 AVDPQGSTVGLVAMEDLVEAYVGTVRDSTH 343 >gi|336325548|ref|YP_004605514.1| hypothetical protein CRES_0994 [Corynebacterium resistens DSM 45100] gi|336101530|gb|AEI09350.1| putative membrane protein [Corynebacterium resistens DSM 45100] Length=354 Score = 309 bits (792), Expect = 3e-82, Method: Compositional matrix adjust. Identities = 169/352 (49%), Positives = 228/352 (65%), Gaps = 15/352 (4%) Query 4 LSAVLLALLLIGANAFFVGAEFALISARRDRLEALAEQGKATAVTVIRAGEQLPAMLTGA 63 L V+L +L+G NAFFV EFALIS+RRDRLE++ G A V A E L ML GA Sbjct 5 LFGVILTFILLGFNAFFVAVEFALISSRRDRLESMISAGNRRAKDVQYAIEHLSIMLAGA 64 Query 64 QLGVTVSSILLGRVGEPAVVKLLQLSFGLSGVPPALLHTLSLAI----VVALHVLLGEMV 119 Q G+T++S+LLG+VGEPA+ L++ F G+PP LLH + AI V LH++LGEMV Sbjct 65 QFGITLASVLLGKVGEPAIAHLIEKPFHAVGLPPQLLHPVGFAIALMLVTVLHIILGEMV 124 Query 120 PKNIALAGPERTAMLLVPPYLVYVRLARPFIAFYNNCANAILRLVGVQPKDELDIAVSTA 179 PKNI+LAGPE A LV P+L++VR+ RP + F N A L+L GV+ KDELD VS + Sbjct 125 PKNISLAGPETVATNLVRPHLLFVRITRPIMLFLNWVARITLKLFGVEQKDELDSTVSPS 184 Query 180 ELSEMIAESLSEGLLDHEEHTRLTRALRIRTRLVADVAVPLVNIRAVQVSAVGSGPTIGG 239 EL+ MI ES +EGL+ E TRL RAL+ R + +V +P+ +I ++ G +G Sbjct 185 ELASMIQESRTEGLIAPAEATRLNRALKSSRRTLREVLIPIADIHVIEQK--GHNLRVGD 242 Query 240 VEQALAQTGYSRFPVVDRGGRFIGYLHIKDVL-------TLGDNPQTVIDLAVVRPLPRV 292 VE+A+A TG+SR+PV D G +IGY+H+KD L T NP +D VRPL RV Sbjct 243 VEKAVADTGFSRYPVTDTTGAWIGYVHVKDSLNNLVVDGTSDQNPY--LDAGDVRPLIRV 300 Query 293 PQSLPLADALSRMRRINSHLALVTADNGSVVGMVALEDVVEDLVGTMRDGTH 344 + A+ RMR +SH+A V +G+++GMV LED++E+LVGT+RD TH Sbjct 301 TDTDSFDVAMRRMRVNSSHVAAVEDSSGAIIGMVTLEDIIEELVGTVRDWTH 352 >gi|260578686|ref|ZP_05846594.1| CBS domain protein [Corynebacterium jeikeium ATCC 43734] gi|258603183|gb|EEW16452.1| CBS domain protein [Corynebacterium jeikeium ATCC 43734] Length=347 Score = 307 bits (786), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 160/350 (46%), Positives = 224/350 (64%), Gaps = 10/350 (2%) Query 1 MDVLSAVLLALLLIGANAFFVGAEFALISARRDRLEALAEQGKATAVTVIRAGEQLPAML 60 M + A++ A+ L+ N +FV EFALIS+RRDRL+++ G A V+ A E L ML Sbjct 1 MGDIWAIVFAVFLLALNGYFVAVEFALISSRRDRLDSMIAAGNKRAKRVLYASEHLSIML 60 Query 61 TGAQLGVTVSSILLGRVGEPAVVKLLQLSFGLSGVPPALLHTLSLAI----VVALHVLLG 116 GAQ G+T++S+LLG+VGEPA+ L++ F G+PP LLH +S AI V LH++LG Sbjct 61 AGAQFGITIASLLLGKVGEPAIAHLIEAPFEALGLPPELLHPVSFAIALLVVTMLHIILG 120 Query 117 EMVPKNIALAGPERTAMLLVPPYLVYVRLARPFIAFYNNCANAILRLVGVQPKDELDIAV 176 EMVPKNIALAGPE A +VP +L++V++ P + N A L+L+GV+ KDELD V Sbjct 121 EMVPKNIALAGPETVATFVVPLHLLFVKVTNPIMQALNWIARHTLKLMGVEQKDELDSTV 180 Query 177 STAELSEMIAESLSEGLLDHEEHTRLTRALRIRTRLVADVAVPLVNIRAVQVSAVGSGP- 235 S +EL+ MI ES SEGL+ EE RL +AL R + +V +P ++ ++ GP Sbjct 181 SPSELASMIQESRSEGLIAPEEANRLDKALSSSRRTLDEVLIPAADVHCIR----QDGPR 236 Query 236 -TIGGVEQALAQTGYSRFPVVDRGGRFIGYLHIKDVLTLGDNPQTVIDLAVVRPLPRVPQ 294 + VE+A+ +TGYSRFPV D G++IGY+H+KDVL P +D +RPL V Sbjct 237 MKVAAVEKAVQETGYSRFPVTDTKGKWIGYVHVKDVLDNLVEPDGQLDTTDIRPLLEVKT 296 Query 295 SLPLADALSRMRRINSHLALVTADNGSVVGMVALEDVVEDLVGTMRDGTH 344 A+ MRR +SH+A V NG ++GM+ LED++E+LVGT+RD TH Sbjct 297 GSSFDVAMRNMRRTSSHIAAVVDTNGQIIGMITLEDIIEELVGTVRDWTH 346 >gi|145295581|ref|YP_001138402.1| hypothetical protein cgR_1508 [Corynebacterium glutamicum R] gi|140845501|dbj|BAF54500.1| hypothetical protein [Corynebacterium glutamicum R] gi|344045096|gb|EGV40770.1| hypothetical protein CgS9114_07230 [Corynebacterium glutamicum S9114] Length=354 Score = 307 bits (786), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 162/353 (46%), Positives = 226/353 (65%), Gaps = 11/353 (3%) Query 1 MDVLSAVLLALLLIGANAFFVGAEFALISARRDRLEALAEQGKATAVTVIRAGEQLPAML 60 M + + VLL ++L+ ANAFFV AEFALIS+RRDRL++L QGK A V+ A E L ML Sbjct 1 MSIWATVLLIIVLLSANAFFVAAEFALISSRRDRLDSLVSQGKKGAEKVLYATEHLSIML 60 Query 61 TGAQLGVTVSSILLGRVGEPAVVKLLQLSFGLSGVPPALLHTLS----LAIVVALHVLLG 116 GAQ G+TV S++LG+V EPA+ +++ F GVP L+H +S LAI+ LH+L G Sbjct 61 AGAQFGITVCSLILGKVAEPAIAHFIEVPFTSWGVPNDLIHPISFVIALAIITWLHILFG 120 Query 117 EMVPKNIALAGPERTAMLLVPPYLVYVRLARPFIAFYNNCANAILRLVGVQPKDELDIAV 176 EMVPKNIA+AGPE M L P + +V++ RP I F N A LR GV+ KDELD V Sbjct 121 EMVPKNIAIAGPETLGMWLAPVLIAFVKITRPLIEFMNWIARLTLRAFGVEQKDELDSTV 180 Query 177 STAELSEMIAESLSEGLLDHEEHTRLTRALRIRTRLVADVAVPLVNIRAVQVSAVGSGPT 236 +L+ MI+ES SEGLLD EEH RL++ALR R + ++ + ++R + SGPT Sbjct 181 DPEQLASMISESRSEGLLDAEEHARLSKALRSEQRSIKELVIKDEDVRTLAFGK--SGPT 238 Query 237 IGGVEQALAQTGYSRFPVVDRGGRFIGYLHIKDVL-TLGD---NPQTVIDLAVVRPLPRV 292 + +E+A+ +TG+SRFPV R G ++GY+HIKD+L L D +P I + +RPL V Sbjct 239 LHQLEEAVRETGFSRFPVTGRDGSYLGYIHIKDILPRLADPEMDPSETIPRSALRPLSNV 298 Query 293 PQSLPLADALSRMRRINSHLALVTADNGSVVGMVALEDVVEDLVGTMRDGTHR 345 + D L M ++H+A V G ++G++ LED++E+ VGT+ D TH Sbjct 299 DADGLMDDVLDFMHHRSAHMAQVRL-KGELLGVITLEDLIEEYVGTVNDWTHE 350 >gi|257056255|ref|YP_003134087.1| CBS domain-containing protein [Saccharomonospora viridis DSM 43017] gi|256586127|gb|ACU97260.1| CBS domain-containing protein [Saccharomonospora viridis DSM 43017] Length=351 Score = 306 bits (785), Expect = 3e-81, Method: Compositional matrix adjust. Identities = 174/350 (50%), Positives = 234/350 (67%), Gaps = 13/350 (3%) Query 2 DVLSAVLLALLLIGANAFFVGAEFALISARRDRLEALAEQGKATAVTVIRAGEQLPAMLT 61 D LS L+A+LL+ ANAFFVGAEFALIS+RRDRLE L EQGK A VI A + ML Sbjct 3 DWLSISLIAVLLL-ANAFFVGAEFALISSRRDRLEGLLEQGKNRAKIVINASRNVSLMLA 61 Query 62 GAQLGVTVSSILLGRVGEPAVVKLLQLSFGLSGVP-PALL-----HTLSLAIVVALHVLL 115 GAQLG+T+ S+LL + GEPAV L+L+ GVP P+ + T++L + LHVL+ Sbjct 62 GAQLGITLCSLLLMQFGEPAVAHQLELAVSALGVPLPSYVVHGIAFTVTLVALTLLHVLI 121 Query 116 GEMVPKNIALAGPERTAMLLVPPYLVYVRLARPFIAFYNNCANAILRLVGVQPKDELDIA 175 GEMVPKN+A+A PER A+ LVP ++ +VRL PFI N+ ANAILRL V+PK E++ Sbjct 122 GEMVPKNLAIAEPERLALWLVPVHVAWVRLTHPFIWLLNSVANAILRLAKVEPKAEIETG 181 Query 176 VSTAELSEMIAESLSEGLLDHEEHTRLTRALRIRTRLVADVAVPLVNIRAVQVSAVGSGP 235 ++ EL+ +++ES EGLL+ EH RL++ L + VADV VPL +++ + S P Sbjct 182 YTSEELAALLSESRREGLLEQSEHRRLSQTLSSMEKTVADVLVPL-----DELTTLPSQP 236 Query 236 TIGGVEQALAQTGYSRFPVVDRGGRFIGYLHIKDVL-TLGDNPQTVIDLAVVRPLPRVPQ 294 T+G VE+A++ TG+SRFPV GG+ Y+H+KD+L L +P V+ R L ++ Sbjct 237 TVGDVERAVSSTGFSRFPVRGDGGQLTSYIHVKDILEQLDGDPSLVVPPDKTRKLTQLGL 296 Query 295 SLPLADALSRMRRINSHLALVTADNGSVVGMVALEDVVEDLVGTMRDGTH 344 L +ALS MRR SHLA GSVVG+VALED++E+ VGT+RDGTH Sbjct 297 QAKLDEALSAMRREGSHLATAVNAEGSVVGIVALEDLLEEYVGTVRDGTH 346 >gi|19552663|ref|NP_600665.1| CBS domain-containing protein [Corynebacterium glutamicum ATCC 13032] gi|62390331|ref|YP_225733.1| CBS domain-containing protein [Corynebacterium glutamicum ATCC 13032] gi|21324216|dbj|BAB98841.1| Uncharacterized CBS domain-containing proteins [Corynebacterium glutamicum ATCC 13032] gi|41325668|emb|CAF21457.1| membrane protein containing CBS domain [Corynebacterium glutamicum ATCC 13032] Length=354 Score = 304 bits (779), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 161/353 (46%), Positives = 226/353 (65%), Gaps = 11/353 (3%) Query 1 MDVLSAVLLALLLIGANAFFVGAEFALISARRDRLEALAEQGKATAVTVIRAGEQLPAML 60 M + + VLL ++L+ ANAFFV AEFALIS+RRDRL++L QGK A V+ A E L ML Sbjct 1 MSIWATVLLIIVLLSANAFFVAAEFALISSRRDRLDSLVSQGKKGAEKVLYATEHLSIML 60 Query 61 TGAQLGVTVSSILLGRVGEPAVVKLLQLSFGLSGVPPALLHTLS----LAIVVALHVLLG 116 GAQ G+TV S++LG+V EPA+ +++ F GVP L+H +S LAI+ LH+L G Sbjct 61 AGAQFGITVCSLILGKVAEPAIAHFIEVPFTSWGVPNDLIHPISFVIALAIITWLHILFG 120 Query 117 EMVPKNIALAGPERTAMLLVPPYLVYVRLARPFIAFYNNCANAILRLVGVQPKDELDIAV 176 EMVPKNIA+AGPE M L P + +V++ RP I F N A LR GV+ K+ELD V Sbjct 121 EMVPKNIAIAGPETLGMWLAPVLIAFVKITRPLIEFMNWIARLTLRAFGVEQKNELDSTV 180 Query 177 STAELSEMIAESLSEGLLDHEEHTRLTRALRIRTRLVADVAVPLVNIRAVQVSAVGSGPT 236 +L+ MI+ES SEGLLD EEH RL++ALR R + ++ + ++R + SGPT Sbjct 181 DPEQLASMISESRSEGLLDAEEHARLSKALRSEQRSIKELVIKDEDVRTLAFGK--SGPT 238 Query 237 IGGVEQALAQTGYSRFPVVDRGGRFIGYLHIKDVL-TLGD---NPQTVIDLAVVRPLPRV 292 + +E+A+ +TG+SRFPV R G ++GY+HIKD+L L D +P I + +RPL V Sbjct 239 LHQLEEAVRETGFSRFPVTGRDGSYLGYIHIKDILPRLADPEMDPSETIPRSALRPLSNV 298 Query 293 PQSLPLADALSRMRRINSHLALVTADNGSVVGMVALEDVVEDLVGTMRDGTHR 345 + D L M ++H+A V G ++G++ LED++E+ VGT+ D TH Sbjct 299 DADGLMDDVLDFMHYRSAHMAQVRL-KGELLGVITLEDLIEEYVGTVNDWTHE 350 >gi|337290679|ref|YP_004629700.1| hypothetical protein CULC22_01071 [Corynebacterium ulcerans BR-AD22] gi|334696792|gb|AEG81589.1| putative membrane protein [Corynebacterium ulcerans 809] gi|334698985|gb|AEG83781.1| putative membrane protein [Corynebacterium ulcerans BR-AD22] Length=350 Score = 304 bits (779), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 152/351 (44%), Positives = 230/351 (66%), Gaps = 9/351 (2%) Query 1 MDVLSAVLLALLLIGANAFFVGAEFALISARRDRLEALAEQGKATAVTVIRAGEQLPAML 60 M++L+A++L ++L+ ANA+FV AEFALIS+R+DR+E L QG+ A V+ A E L ML Sbjct 1 MNLLTAIVLIVVLLLANAYFVAAEFALISSRKDRIENLISQGRPGAKRVLYATEHLSIML 60 Query 61 TGAQLGVTVSSILLGRVGEPAVVKLLQLSFGLSGVPPALLH----TLSLAIVVALHVLLG 116 Q G+T+ S++LG+V EPA+ + ++ F G+P LLH ++L I+ LH+L G Sbjct 61 AACQFGITICSLILGKVAEPAIARFIEEPFASLGLPAHLLHPTSFVIALGIITFLHILFG 120 Query 117 EMVPKNIALAGPERTAMLLVPPYLVYVRLARPFIAFYNNCANAILRLVGVQPKDELDIAV 176 EMVPKNI+LAGPE A+ L+P +V+ ++ RPF+A N A L+ G++ KDELD V Sbjct 121 EMVPKNISLAGPETLALWLIPTLIVFCQITRPFLALMNWFARITLKAFGIEQKDELDSTV 180 Query 177 STAELSEMIAESLSEGLLDHEEHTRLTRALRIRTRLVADVAVPLVNIRAVQVSAVGSGPT 236 +L+ MI+ES SEG LD EEH RL +ALR+ R + + +PL +R + GP Sbjct 181 DPNQLATMISESRSEGFLDAEEHARLNKALRVEDRSIKEALIPLSRVRTLDFGT--RGPK 238 Query 237 IGGVEQALAQTGYSRFPVVDRGGRFIGYLHIKDVLTL--GDNPQTVIDLAVVRPLPRVPQ 294 + +EQA+A+TG+SRFPV+ + G +IGY+H+KD+L D P +I + +RPL V Sbjct 239 LSDLEQAVAETGFSRFPVMGKDGSYIGYVHVKDILDRFDTDTPDHIIHRSEIRPLTIVAA 298 Query 295 SLPLADALSRMRRINSHLALVTADNGSVVGMVALEDVVEDLVGTMRDGTHR 345 + + +AL M + ++H+A V D G+++G++ LED++E+ VGT D TH Sbjct 299 TGTMDEALQLMHKKSAHMAQVR-DRGALLGVITLEDLIEEYVGTFSDWTHE 348 Lambda K H 0.322 0.138 0.384 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 632983597940 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40