BLASTP 2.2.25+


Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           15,229,318 sequences; 5,219,829,388 total letters



Query= Rv1845c

Length=316
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|15608982|ref|NP_216361.1|  hypothetical protein Rv1845c [Mycob...   589    2e-166
gi|121637748|ref|YP_977971.1|  hypothetical protein BCG_1881c [My...   587    7e-166
gi|289447459|ref|ZP_06437203.1|  conserved membrane protein [Myco...   586    2e-165
gi|340626853|ref|YP_004745305.1|  hypothetical protein MCAN_18601...   583    8e-165
gi|308375693|ref|ZP_07444793.2|  conserved membrane protein [Myco...   557    8e-157
gi|254232023|ref|ZP_04925350.1|  conserved hypothetical transmemb...   484    9e-135
gi|254550855|ref|ZP_05141302.1|  hypothetical protein Mtube_10421...   483    2e-134
gi|342861252|ref|ZP_08717900.1|  integral membrane protein [Mycob...   480    1e-133
gi|15828113|ref|NP_302376.1|  integral membrane protein [Mycobact...   474    1e-131
gi|41407656|ref|NP_960492.1|  hypothetical protein MAP1558c [Myco...   457    1e-126
gi|183982725|ref|YP_001851016.1|  hypothetical protein MMAR_2719 ...   432    2e-119
gi|118618425|ref|YP_906757.1|  hypothetical protein MUL_3034 [Myc...   431    6e-119
gi|120404067|ref|YP_953896.1|  peptidase M48, Ste24p [Mycobacteri...   407    9e-112
gi|296164830|ref|ZP_06847388.1|  integral membrane protein [Mycob...   392    4e-107
gi|108799777|ref|YP_639974.1|  peptidase M48, Ste24p [Mycobacteri...   388    6e-106
gi|333990580|ref|YP_004523194.1|  hypothetical protein JDM601_194...   385    4e-105
gi|118470290|ref|YP_887934.1|  integral membrane protein [Mycobac...   385    5e-105
gi|54024486|ref|YP_118728.1|  hypothetical protein nfa25170 [Noca...   384    2e-104
gi|254821978|ref|ZP_05226979.1|  integral membrane protein [Mycob...   377    2e-102
gi|111024198|ref|YP_707170.1|  hypothetical protein RHA1_ro07248 ...   369    2e-100
gi|169629500|ref|YP_001703149.1|  hypothetical protein MAB_2414c ...   369    4e-100
gi|226366441|ref|YP_002784224.1|  hypothetical protein ROP_70320 ...   367    1e-99 
gi|145223944|ref|YP_001134622.1|  peptidase M48, Ste24p [Mycobact...   365    6e-99 
gi|333920789|ref|YP_004494370.1|  hypothetical protein AS9A_3125 ...   364    9e-99 
gi|289750418|ref|ZP_06509796.1|  conserved hypothetical protein [...   363    2e-98 
gi|315444276|ref|YP_004077155.1|  Zn-dependent protease with chap...   363    2e-98 
gi|326384953|ref|ZP_08206627.1|  peptidase M48 Ste24p [Gordonia n...   352    6e-95 
gi|325676738|ref|ZP_08156411.1|  peptidase M48, Ste24p [Rhodococc...   348    5e-94 
gi|262202664|ref|YP_003273872.1|  peptidase M48 Ste24p [Gordonia ...   348    5e-94 
gi|312139810|ref|YP_004007146.1|  metallopeptidase [Rhodococcus e...   348    6e-94 
gi|240172023|ref|ZP_04750682.1|  hypothetical protein MkanA1_2209...   348    9e-94 
gi|289745723|ref|ZP_06505101.1|  conserved membrane protein [Myco...   347    1e-93 
gi|343928476|ref|ZP_08767924.1|  hypothetical protein GOALK_117_0...   333    3e-89 
gi|226306590|ref|YP_002766550.1|  hypothetical protein RER_31030 ...   332    3e-89 
gi|296140017|ref|YP_003647260.1|  peptidase M48 Ste24p [Tsukamure...   322    4e-86 
gi|254775346|ref|ZP_05216862.1|  integral membrane protein [Mycob...   313    2e-83 
gi|296394190|ref|YP_003659074.1|  peptidase M48 Ste24p [Segnilipa...   308    6e-82 
gi|317507034|ref|ZP_07964799.1|  integral membrane protein [Segni...   305    7e-81 
gi|289574527|ref|ZP_06454754.1|  LOW QUALITY PROTEIN: conserved h...   299    3e-79 
gi|289757951|ref|ZP_06517329.1|  conserved hypothetical protein [...   201    9e-50 
gi|289757950|ref|ZP_06517328.1|  conserved hypothetical protein [...   199    5e-49 
gi|336118118|ref|YP_004572886.1|  hypothetical protein MLP_24690 ...   189    4e-46 
gi|152965610|ref|YP_001361394.1|  peptidase M48 Ste24p [Kineococc...   169    8e-40 
gi|284032683|ref|YP_003382614.1|  peptidase M48 Ste24p [Kribbella...   163    4e-38 
gi|84495460|ref|ZP_00994579.1|  hypothetical protein JNB_11679 [J...   158    1e-36 
gi|317123388|ref|YP_004097500.1|  peptidase M48 Ste24p [Intraspor...   151    1e-34 
gi|256389536|ref|YP_003111100.1|  peptidase M48 Ste24p [Catenulis...   140    2e-31 
gi|271966322|ref|YP_003340518.1|  hypothetical protein Sros_4975 ...   139    7e-31 
gi|336176645|ref|YP_004582020.1|  peptidase M48 Ste24p [Frankia s...   134    2e-29 
gi|86738971|ref|YP_479371.1|  peptidase M48, Ste24p [Frankia sp. ...   133    4e-29 


>gi|15608982|ref|NP_216361.1| hypothetical protein Rv1845c [Mycobacterium tuberculosis H37Rv]
 gi|15841313|ref|NP_336350.1| hypothetical protein MT1893 [Mycobacterium tuberculosis CDC1551]
 gi|31793035|ref|NP_855528.1| hypothetical protein Mb1876c [Mycobacterium bovis AF2122/97]
 58 more sequence titles
 Length=316

 Score =  589 bits (1518),  Expect = 2e-166, Method: Compositional matrix adjust.
 Identities = 315/316 (99%), Positives = 316/316 (100%), Gaps = 0/316 (0%)

Query  1    VSALAFTILAVLLAGPTPALLARATWPLRAPRAAMVLWQAIALAAVLSSFSAGIAIASRL  60
            +SALAFTILAVLLAGPTPALLARATWPLRAPRAAMVLWQAIALAAVLSSFSAGIAIASRL
Sbjct  1    MSALAFTILAVLLAGPTPALLARATWPLRAPRAAMVLWQAIALAAVLSSFSAGIAIASRL  60

Query  61   LMPGPDGRPTTSFVGAAGRLGWPLWAAYITVFALTVLVGARLAVAVVRVATATRRRRAHH  120
            LMPGPDGRPTTSFVGAAGRLGWPLWAAYITVFALTVLVGARLAVAVVRVATATRRRRAHH
Sbjct  61   LMPGPDGRPTTSFVGAAGRLGWPLWAAYITVFALTVLVGARLAVAVVRVATATRRRRAHH  120

Query  121  RMVVDLVGVGHNGALAQPCARARDLRVLDVAQPLAYCLPGVRSRVVVSEGTLTALADAEV  180
            RMVVDLVGVGHNGALAQPCARARDLRVLDVAQPLAYCLPGVRSRVVVSEGTLTALADAEV
Sbjct  121  RMVVDLVGVGHNGALAQPCARARDLRVLDVAQPLAYCLPGVRSRVVVSEGTLTALADAEV  180

Query  181  AAILTHERAHLRARHDLVLEAFTAVHAAFPRLVRSANALGAVQLLVELLADDAAVRAAGR  240
            AAILTHERAHLRARHDLVLEAFTAVHAAFPRLVRSANALGAVQLLVELLADDAAVRAAGR
Sbjct  181  AAILTHERAHLRARHDLVLEAFTAVHAAFPRLVRSANALGAVQLLVELLADDAAVRAAGR  240

Query  241  TPLARALVACASGRAPSGALAVGGPSTVLRVRRLSGRGNSAVLSAAAYLAAAAVLVVPTV  300
            TPLARALVACASGRAPSGALAVGGPSTVLRVRRLSGRGNSAVLSAAAYLAAAAVLVVPTV
Sbjct  241  TPLARALVACASGRAPSGALAVGGPSTVLRVRRLSGRGNSAVLSAAAYLAAAAVLVVPTV  300

Query  301  ALAVPWLTQLQRLFIA  316
            ALAVPWLTQLQRLFIA
Sbjct  301  ALAVPWLTQLQRLFIA  316


>gi|121637748|ref|YP_977971.1| hypothetical protein BCG_1881c [Mycobacterium bovis BCG str. 
Pasteur 1173P2]
 gi|224990232|ref|YP_002644919.1| hypothetical protein JTY_1865 [Mycobacterium bovis BCG str. Tokyo 
172]
 gi|121493395|emb|CAL71868.1| Conserved hypothetical transmembrane protein [Mycobacterium bovis 
BCG str. Pasteur 1173P2]
 gi|224773345|dbj|BAH26151.1| hypothetical protein JTY_1865 [Mycobacterium bovis BCG str. Tokyo 
172]
 gi|341601775|emb|CCC64449.1| conserved hypothetical transmembrane protein [Mycobacterium bovis 
BCG str. Moreau RDJ]
Length=316

 Score =  587 bits (1514),  Expect = 7e-166, Method: Compositional matrix adjust.
 Identities = 314/316 (99%), Positives = 315/316 (99%), Gaps = 0/316 (0%)

Query  1    VSALAFTILAVLLAGPTPALLARATWPLRAPRAAMVLWQAIALAAVLSSFSAGIAIASRL  60
            +SALAFTILAVLLAGPTPALLARATWPLRAPRAAMVLWQAIALAAVLSSFSAGIAIASRL
Sbjct  1    MSALAFTILAVLLAGPTPALLARATWPLRAPRAAMVLWQAIALAAVLSSFSAGIAIASRL  60

Query  61   LMPGPDGRPTTSFVGAAGRLGWPLWAAYITVFALTVLVGARLAVAVVRVATATRRRRAHH  120
            LMPGPDGRPTTSFVGAAGRLGWPLWAAYITVFALTVLVGARLAVAVVRVATATRRRRAHH
Sbjct  61   LMPGPDGRPTTSFVGAAGRLGWPLWAAYITVFALTVLVGARLAVAVVRVATATRRRRAHH  120

Query  121  RMVVDLVGVGHNGALAQPCARARDLRVLDVAQPLAYCLPGVRSRVVVSEGTLTALADAEV  180
            RMVVDLVGVGHNGALAQPCARARDLRVLDVAQPLAYCLPGVRSRVVVSEGTLTALADAEV
Sbjct  121  RMVVDLVGVGHNGALAQPCARARDLRVLDVAQPLAYCLPGVRSRVVVSEGTLTALADAEV  180

Query  181  AAILTHERAHLRARHDLVLEAFTAVHAAFPRLVRSANALGAVQLLVELLADDAAVRAAGR  240
            AAILTHERAHLRARHDLVLEAFTAVHAAFPRLVRSANALGA QLLVELLADDAAVRAAGR
Sbjct  181  AAILTHERAHLRARHDLVLEAFTAVHAAFPRLVRSANALGAAQLLVELLADDAAVRAAGR  240

Query  241  TPLARALVACASGRAPSGALAVGGPSTVLRVRRLSGRGNSAVLSAAAYLAAAAVLVVPTV  300
            TPLARALVACASGRAPSGALAVGGPSTVLRVRRLSGRGNSAVLSAAAYLAAAAVLVVPTV
Sbjct  241  TPLARALVACASGRAPSGALAVGGPSTVLRVRRLSGRGNSAVLSAAAYLAAAAVLVVPTV  300

Query  301  ALAVPWLTQLQRLFIA  316
            ALAVPWLTQLQRLFIA
Sbjct  301  ALAVPWLTQLQRLFIA  316


>gi|289447459|ref|ZP_06437203.1| conserved membrane protein [Mycobacterium tuberculosis CPHL_A]
 gi|289420417|gb|EFD17618.1| conserved membrane protein [Mycobacterium tuberculosis CPHL_A]
Length=316

 Score =  586 bits (1510),  Expect = 2e-165, Method: Compositional matrix adjust.
 Identities = 314/316 (99%), Positives = 315/316 (99%), Gaps = 0/316 (0%)

Query  1    VSALAFTILAVLLAGPTPALLARATWPLRAPRAAMVLWQAIALAAVLSSFSAGIAIASRL  60
            +SALAFTILAVLLAGPTPALLARATWPLRAPRAAMVLWQAIALAAVLSSFSAGIAIASRL
Sbjct  1    MSALAFTILAVLLAGPTPALLARATWPLRAPRAAMVLWQAIALAAVLSSFSAGIAIASRL  60

Query  61   LMPGPDGRPTTSFVGAAGRLGWPLWAAYITVFALTVLVGARLAVAVVRVATATRRRRAHH  120
            LMPGPDGRPTTSFVGAAGRLGWPLWAAYITVFALTVLVGARLAVAVVRVATATRRRRAHH
Sbjct  61   LMPGPDGRPTTSFVGAAGRLGWPLWAAYITVFALTVLVGARLAVAVVRVATATRRRRAHH  120

Query  121  RMVVDLVGVGHNGALAQPCARARDLRVLDVAQPLAYCLPGVRSRVVVSEGTLTALADAEV  180
            RMVVDLVGVGHNGALAQPCARARDLRVLDVAQPLAYCLPGVRSRVVVSEGTLTALADAEV
Sbjct  121  RMVVDLVGVGHNGALAQPCARARDLRVLDVAQPLAYCLPGVRSRVVVSEGTLTALADAEV  180

Query  181  AAILTHERAHLRARHDLVLEAFTAVHAAFPRLVRSANALGAVQLLVELLADDAAVRAAGR  240
            AAILTHERAHLRARHDLVLEAFTAVHAAFPRLVRSANALGAVQLLVELLADDAAVRAAGR
Sbjct  181  AAILTHERAHLRARHDLVLEAFTAVHAAFPRLVRSANALGAVQLLVELLADDAAVRAAGR  240

Query  241  TPLARALVACASGRAPSGALAVGGPSTVLRVRRLSGRGNSAVLSAAAYLAAAAVLVVPTV  300
            TPLARALVACASGRAPSGALAVGGPSTVLRVRRLSGRGNSAVLSAAAYLAAAAVLVVPTV
Sbjct  241  TPLARALVACASGRAPSGALAVGGPSTVLRVRRLSGRGNSAVLSAAAYLAAAAVLVVPTV  300

Query  301  ALAVPWLTQLQRLFIA  316
            ALAVPWLTQLQ LFIA
Sbjct  301  ALAVPWLTQLQLLFIA  316


>gi|340626853|ref|YP_004745305.1| hypothetical protein MCAN_18601 [Mycobacterium canettii CIPT 
140010059]
 gi|340005043|emb|CCC44192.1| conserved hypothetical transmembrane protein [Mycobacterium canettii 
CIPT 140010059]
Length=316

 Score =  583 bits (1504),  Expect = 8e-165, Method: Compositional matrix adjust.
 Identities = 313/316 (99%), Positives = 314/316 (99%), Gaps = 0/316 (0%)

Query  1    VSALAFTILAVLLAGPTPALLARATWPLRAPRAAMVLWQAIALAAVLSSFSAGIAIASRL  60
            +SALAFTILAVLLAGPTPALLARATWPLRAPRAAMVLWQAIALAAVLSSFSAGIAIASRL
Sbjct  1    MSALAFTILAVLLAGPTPALLARATWPLRAPRAAMVLWQAIALAAVLSSFSAGIAIASRL  60

Query  61   LMPGPDGRPTTSFVGAAGRLGWPLWAAYITVFALTVLVGARLAVAVVRVATATRRRRAHH  120
            LMPGPDGRPTTSFVGAAGRLGWPLWAAYITVFALTVLVGARLAVAVVRVATATRRRRAHH
Sbjct  61   LMPGPDGRPTTSFVGAAGRLGWPLWAAYITVFALTVLVGARLAVAVVRVATATRRRRAHH  120

Query  121  RMVVDLVGVGHNGALAQPCARARDLRVLDVAQPLAYCLPGVRSRVVVSEGTLTALADAEV  180
            RMVVDLVGVGHN ALAQPCARARDLRVLDVAQPLAYCLPGVRSRVVVSEG LTALADAEV
Sbjct  121  RMVVDLVGVGHNVALAQPCARARDLRVLDVAQPLAYCLPGVRSRVVVSEGALTALADAEV  180

Query  181  AAILTHERAHLRARHDLVLEAFTAVHAAFPRLVRSANALGAVQLLVELLADDAAVRAAGR  240
            AAILTHERAHLRARHDLVLEAFTAVHAAFPRLVRSANALGAVQLLVELLADDAAVRAAGR
Sbjct  181  AAILTHERAHLRARHDLVLEAFTAVHAAFPRLVRSANALGAVQLLVELLADDAAVRAAGR  240

Query  241  TPLARALVACASGRAPSGALAVGGPSTVLRVRRLSGRGNSAVLSAAAYLAAAAVLVVPTV  300
            TPLARALVACASGRAPSGALAVGGPSTVLRVRRLSGRGNSAVLSAAAYLAAAAVLVVPTV
Sbjct  241  TPLARALVACASGRAPSGALAVGGPSTVLRVRRLSGRGNSAVLSAAAYLAAAAVLVVPTV  300

Query  301  ALAVPWLTQLQRLFIA  316
            ALAVPWLTQLQRLFIA
Sbjct  301  ALAVPWLTQLQRLFIA  316


>gi|308375693|ref|ZP_07444793.2| conserved membrane protein [Mycobacterium tuberculosis SUMu007]
 gi|308345440|gb|EFP34291.1| conserved membrane protein [Mycobacterium tuberculosis SUMu007]
Length=297

 Score =  557 bits (1435),  Expect = 8e-157, Method: Compositional matrix adjust.
 Identities = 296/297 (99%), Positives = 297/297 (100%), Gaps = 0/297 (0%)

Query  20   LLARATWPLRAPRAAMVLWQAIALAAVLSSFSAGIAIASRLLMPGPDGRPTTSFVGAAGR  79
            +LARATWPLRAPRAAMVLWQAIALAAVLSSFSAGIAIASRLLMPGPDGRPTTSFVGAAGR
Sbjct  1    MLARATWPLRAPRAAMVLWQAIALAAVLSSFSAGIAIASRLLMPGPDGRPTTSFVGAAGR  60

Query  80   LGWPLWAAYITVFALTVLVGARLAVAVVRVATATRRRRAHHRMVVDLVGVGHNGALAQPC  139
            LGWPLWAAYITVFALTVLVGARLAVAVVRVATATRRRRAHHRMVVDLVGVGHNGALAQPC
Sbjct  61   LGWPLWAAYITVFALTVLVGARLAVAVVRVATATRRRRAHHRMVVDLVGVGHNGALAQPC  120

Query  140  ARARDLRVLDVAQPLAYCLPGVRSRVVVSEGTLTALADAEVAAILTHERAHLRARHDLVL  199
            ARARDLRVLDVAQPLAYCLPGVRSRVVVSEGTLTALADAEVAAILTHERAHLRARHDLVL
Sbjct  121  ARARDLRVLDVAQPLAYCLPGVRSRVVVSEGTLTALADAEVAAILTHERAHLRARHDLVL  180

Query  200  EAFTAVHAAFPRLVRSANALGAVQLLVELLADDAAVRAAGRTPLARALVACASGRAPSGA  259
            EAFTAVHAAFPRLVRSANALGAVQLLVELLADDAAVRAAGRTPLARALVACASGRAPSGA
Sbjct  181  EAFTAVHAAFPRLVRSANALGAVQLLVELLADDAAVRAAGRTPLARALVACASGRAPSGA  240

Query  260  LAVGGPSTVLRVRRLSGRGNSAVLSAAAYLAAAAVLVVPTVALAVPWLTQLQRLFIA  316
            LAVGGPSTVLRVRRLSGRGNSAVLSAAAYLAAAAVLVVPTVALAVPWLTQLQRLFIA
Sbjct  241  LAVGGPSTVLRVRRLSGRGNSAVLSAAAYLAAAAVLVVPTVALAVPWLTQLQRLFIA  297


>gi|254232023|ref|ZP_04925350.1| conserved hypothetical transmembrane protein [Mycobacterium tuberculosis 
C]
 gi|124601082|gb|EAY60092.1| conserved hypothetical transmembrane protein [Mycobacterium tuberculosis 
C]
Length=318

 Score =  484 bits (1245),  Expect = 9e-135, Method: Compositional matrix adjust.
 Identities = 306/318 (97%), Positives = 310/318 (98%), Gaps = 2/318 (0%)

Query  1    VSALAFTILAVLLAGPTPALLARATWPLRAPRAAMVLWQAIALAAVLSSFSAGIAIASRL  60
            +SALAFTILAVLLAGPTPALLARATWPLRAPRAAMVLWQAIALAAVLSSFSAGIAIASRL
Sbjct  1    MSALAFTILAVLLAGPTPALLARATWPLRAPRAAMVLWQAIALAAVLSSFSAGIAIASRL  60

Query  61   LMPGPDGRPTTSFVGAAGRLGWPLWAAYITVFALTVLVGARLAVAVVRVATATRRRRAHH  120
            LMPGPDGRPTTSFVGAAGRLGWPLWAAYITVFALTVLVGARLAVAVVRVATATRRRRAHH
Sbjct  61   LMPGPDGRPTTSFVGAAGRLGWPLWAAYITVFALTVLVGARLAVAVVRVATATRRRRAHH  120

Query  121  RMVVDLVGVGHNGA-LAQPCARARDLRVLDVAQ-PLAYCLPGVRSRVVVSEGTLTALADA  178
            RMVVDLVGVGHNGA   +PCARARDLR L  ++ PLAYCLPGVRSRVVVSEGTLTALADA
Sbjct  121  RMVVDLVGVGHNGAACPRPCARARDLRGLGTSRSPLAYCLPGVRSRVVVSEGTLTALADA  180

Query  179  EVAAILTHERAHLRARHDLVLEAFTAVHAAFPRLVRSANALGAVQLLVELLADDAAVRAA  238
            EVAAILTHERAHLRARHD VLEAFTAVHAAFPRLVRSANALGAVQLLVELLADDAAVRAA
Sbjct  181  EVAAILTHERAHLRARHDPVLEAFTAVHAAFPRLVRSANALGAVQLLVELLADDAAVRAA  240

Query  239  GRTPLARALVACASGRAPSGALAVGGPSTVLRVRRLSGRGNSAVLSAAAYLAAAAVLVVP  298
            GRTPLARALVACASGRAPSGALAVGGPSTVLRVRRLSGRGNSAVLSAAAYLAAAAVLVVP
Sbjct  241  GRTPLARALVACASGRAPSGALAVGGPSTVLRVRRLSGRGNSAVLSAAAYLAAAAVLVVP  300

Query  299  TVALAVPWLTQLQRLFIA  316
            TVALAVPWLTQLQRLFIA
Sbjct  301  TVALAVPWLTQLQRLFIA  318


>gi|254550855|ref|ZP_05141302.1| hypothetical protein Mtube_10421 [Mycobacterium tuberculosis 
'98-R604 INH-RIF-EM']
Length=279

 Score =  483 bits (1242),  Expect = 2e-134, Method: Compositional matrix adjust.
 Identities = 256/257 (99%), Positives = 257/257 (100%), Gaps = 0/257 (0%)

Query  1    VSALAFTILAVLLAGPTPALLARATWPLRAPRAAMVLWQAIALAAVLSSFSAGIAIASRL  60
            +SALAFTILAVLLAGPTPALLARATWPLRAPRAAMVLWQAIALAAVLSSFSAGIAIASRL
Sbjct  1    MSALAFTILAVLLAGPTPALLARATWPLRAPRAAMVLWQAIALAAVLSSFSAGIAIASRL  60

Query  61   LMPGPDGRPTTSFVGAAGRLGWPLWAAYITVFALTVLVGARLAVAVVRVATATRRRRAHH  120
            LMPGPDGRPTTSFVGAAGRLGWPLWAAYITVFALTVLVGARLAVAVVRVATATRRRRAHH
Sbjct  61   LMPGPDGRPTTSFVGAAGRLGWPLWAAYITVFALTVLVGARLAVAVVRVATATRRRRAHH  120

Query  121  RMVVDLVGVGHNGALAQPCARARDLRVLDVAQPLAYCLPGVRSRVVVSEGTLTALADAEV  180
            RMVVDLVGVGHNGALAQPCARARDLRVLDVAQPLAYCLPGVRSRVVVSEGTLTALADAEV
Sbjct  121  RMVVDLVGVGHNGALAQPCARARDLRVLDVAQPLAYCLPGVRSRVVVSEGTLTALADAEV  180

Query  181  AAILTHERAHLRARHDLVLEAFTAVHAAFPRLVRSANALGAVQLLVELLADDAAVRAAGR  240
            AAILTHERAHLRARHDLVLEAFTAVHAAFPRLVRSANALGAVQLLVELLADDAAVRAAGR
Sbjct  181  AAILTHERAHLRARHDLVLEAFTAVHAAFPRLVRSANALGAVQLLVELLADDAAVRAAGR  240

Query  241  TPLARALVACASGRAPS  257
            TPLARALVACASGRAPS
Sbjct  241  TPLARALVACASGRAPS  257


>gi|342861252|ref|ZP_08717900.1| integral membrane protein [Mycobacterium colombiense CECT 3035]
 gi|342131152|gb|EGT84433.1| integral membrane protein [Mycobacterium colombiense CECT 3035]
Length=316

 Score =  480 bits (1236),  Expect = 1e-133, Method: Compositional matrix adjust.
 Identities = 278/314 (89%), Positives = 290/314 (93%), Gaps = 0/314 (0%)

Query  1    VSALAFTILAVLLAGPTPALLARATWPLRAPRAAMVLWQAIALAAVLSSFSAGIAIASRL  60
            +SALAFTILAVLL GP PA++ARA WPLRAPRAAMVLWQA+ALAAVLS+FSAGIAIA+RL
Sbjct  1    MSALAFTILAVLLTGPVPAMVARARWPLRAPRAAMVLWQAVALAAVLSAFSAGIAIATRL  60

Query  61   LMPGPDGRPTTSFVGAAGRLGWPLWAAYITVFALTVLVGARLAVAVVRVATATRRRRAHH  120
            LMPG DGRPTTS VGAA RLGWPLW  YI+VFALTVLVG RL VAVVRVA A R+RRAHH
Sbjct  61   LMPGRDGRPTTSIVGAADRLGWPLWTLYISVFALTVLVGVRLMVAVVRVAIANRKRRAHH  120

Query  121  RMVVDLVGVGHNGALAQPCARARDLRVLDVAQPLAYCLPGVRSRVVVSEGTLTALADAEV  180
            RMVVDLVGVGH  AL+QPCAR RDLRVLDV QPLAYCLPGVRSRVVVSEGTLT LADAEV
Sbjct  121  RMVVDLVGVGHGAALSQPCARTRDLRVLDVPQPLAYCLPGVRSRVVVSEGTLTTLADAEV  180

Query  181  AAILTHERAHLRARHDLVLEAFTAVHAAFPRLVRSANALGAVQLLVELLADDAAVRAAGR  240
             AILTHERAHLRARHDLVLEAFTAVHAAFPRLVRSANALGAVQLLVELLADDAAVRAAGR
Sbjct  181  EAILTHERAHLRARHDLVLEAFTAVHAAFPRLVRSANALGAVQLLVELLADDAAVRAAGR  240

Query  241  TPLARALVACASGRAPSGALAVGGPSTVLRVRRLSGRGNSAVLSAAAYLAAAAVLVVPTV  300
             PLARALVACASGRAPSGALA  GPSTVLRVRRL GRGNS +LSAAAYLAAAAV VVPTV
Sbjct  241  APLARALVACASGRAPSGALAASGPSTVLRVRRLGGRGNSPLLSAAAYLAAAAVFVVPTV  300

Query  301  ALAVPWLTQLQRLF  314
            ALAVPWLT+L+RLF
Sbjct  301  ALAVPWLTELERLF  314


>gi|15828113|ref|NP_302376.1| integral membrane protein [Mycobacterium leprae TN]
 gi|221230590|ref|YP_002504006.1| integral membrane protein [Mycobacterium leprae Br4923]
 gi|2578374|emb|CAA15450.1| hypothetical protein MLCB1788.18 [Mycobacterium leprae]
 gi|13093667|emb|CAC31019.1| integral membrane protein [Mycobacterium leprae]
 gi|219933697|emb|CAR72161.1| integral membrane protein [Mycobacterium leprae Br4923]
Length=316

 Score =  474 bits (1219),  Expect = 1e-131, Method: Compositional matrix adjust.
 Identities = 275/314 (88%), Positives = 291/314 (93%), Gaps = 0/314 (0%)

Query  1    VSALAFTILAVLLAGPTPALLARATWPLRAPRAAMVLWQAIALAAVLSSFSAGIAIASRL  60
            +SALAFTILAVLL GPTP L+AR+TWPLRAPRAAMVLWQ IALAA LS+FSAGIAIASR+
Sbjct  1    MSALAFTILAVLLVGPTPTLVARSTWPLRAPRAAMVLWQTIALAAALSTFSAGIAIASRV  60

Query  61   LMPGPDGRPTTSFVGAAGRLGWPLWAAYITVFALTVLVGARLAVAVVRVATATRRRRAHH  120
            LMPGPDGR T S +GAAGRLGWPLWAAY+  FALTVLVGARL VA+VRVA ATRRRRAHH
Sbjct  61   LMPGPDGRLTASVIGAAGRLGWPLWAAYVAAFALTVLVGARLIVAIVRVAIATRRRRAHH  120

Query  121  RMVVDLVGVGHNGALAQPCARARDLRVLDVAQPLAYCLPGVRSRVVVSEGTLTALADAEV  180
            RMVVDLVGVGHN ALAQPCARARDLRVL+VAQPLAYCLPGVRSRVVVSEG LT L D EV
Sbjct  121  RMVVDLVGVGHNAALAQPCARARDLRVLEVAQPLAYCLPGVRSRVVVSEGALTKLNDTEV  180

Query  181  AAILTHERAHLRARHDLVLEAFTAVHAAFPRLVRSANALGAVQLLVELLADDAAVRAAGR  240
             AILTHERAHLRARHDLVLEAFTAVHAAFPRLVRS+ AL AV+LLVELLADDAAVRAAGR
Sbjct  181  TAILTHERAHLRARHDLVLEAFTAVHAAFPRLVRSSAALSAVRLLVELLADDAAVRAAGR  240

Query  241  TPLARALVACASGRAPSGALAVGGPSTVLRVRRLSGRGNSAVLSAAAYLAAAAVLVVPTV  300
            TPLARALVACASG+APSGALA GG +TVLRVRRLSGR NSAV+SAAAYLAAA VL+VPTV
Sbjct  241  TPLARALVACASGQAPSGALAAGGNTTVLRVRRLSGRSNSAVVSAAAYLAAAIVLLVPTV  300

Query  301  ALAVPWLTQLQRLF  314
            ALAVPWLT+LQRLF
Sbjct  301  ALAVPWLTELQRLF  314


>gi|41407656|ref|NP_960492.1| hypothetical protein MAP1558c [Mycobacterium avium subsp. paratuberculosis 
K-10]
 gi|118464630|ref|YP_882056.1| integral membrane protein [Mycobacterium avium 104]
 gi|41396009|gb|AAS03875.1| hypothetical protein MAP_1558c [Mycobacterium avium subsp. paratuberculosis 
K-10]
 gi|118165917|gb|ABK66814.1| integral membrane protein [Mycobacterium avium 104]
 gi|336457606|gb|EGO36611.1| Zn-dependent protease with chaperone function [Mycobacterium 
avium subsp. paratuberculosis S397]
Length=316

 Score =  457 bits (1175),  Expect = 1e-126, Method: Compositional matrix adjust.
 Identities = 276/314 (88%), Positives = 293/314 (94%), Gaps = 0/314 (0%)

Query  1    VSALAFTILAVLLAGPTPALLARATWPLRAPRAAMVLWQAIALAAVLSSFSAGIAIASRL  60
            +SALAFTILAVLL GP PA+LARA WPLRAPRAAMVLWQA+ALAAVLS+FSAGIAIA+R+
Sbjct  1    MSALAFTILAVLLTGPVPAMLARARWPLRAPRAAMVLWQAVALAAVLSAFSAGIAIATRV  60

Query  61   LMPGPDGRPTTSFVGAAGRLGWPLWAAYITVFALTVLVGARLAVAVVRVATATRRRRAHH  120
            L+PGPDGRPTTS +GA GRLGWPLW AYI VFALTVLVGARL VAVVRVA A RRRRAHH
Sbjct  61   LVPGPDGRPTTSILGAEGRLGWPLWTAYIGVFALTVLVGARLMVAVVRVAIANRRRRAHH  120

Query  121  RMVVDLVGVGHNGALAQPCARARDLRVLDVAQPLAYCLPGVRSRVVVSEGTLTALADAEV  180
            RMVVDLVG+GH  AL+QPC+R RDLRVLDV QPLAYCLPGVRSRVVVSEGTL+ LADAEV
Sbjct  121  RMVVDLVGMGHGAALSQPCSRTRDLRVLDVPQPLAYCLPGVRSRVVVSEGTLSTLADAEV  180

Query  181  AAILTHERAHLRARHDLVLEAFTAVHAAFPRLVRSANALGAVQLLVELLADDAAVRAAGR  240
            +AILTHERAHLRARHDLVLEAFTAVHAAFPRLVRSANALGAVQLLVELLADDAAVRAAGR
Sbjct  181  SAILTHERAHLRARHDLVLEAFTAVHAAFPRLVRSANALGAVQLLVELLADDAAVRAAGR  240

Query  241  TPLARALVACASGRAPSGALAVGGPSTVLRVRRLSGRGNSAVLSAAAYLAAAAVLVVPTV  300
             PLARALVACASGRAPSGALA GGPSTV+RVRRL GRGNS +LSAAAYLAAAAV VVPTV
Sbjct  241  APLARALVACASGRAPSGALAAGGPSTVVRVRRLGGRGNSPLLSAAAYLAAAAVFVVPTV  300

Query  301  ALAVPWLTQLQRLF  314
            ALAVPWLT+L+RL 
Sbjct  301  ALAVPWLTELERLL  314


>gi|183982725|ref|YP_001851016.1| hypothetical protein MMAR_2719 [Mycobacterium marinum M]
 gi|183176051|gb|ACC41161.1| conserved hypothetical transmembrane protein [Mycobacterium marinum 
M]
Length=316

 Score =  432 bits (1112),  Expect = 2e-119, Method: Compositional matrix adjust.
 Identities = 274/314 (88%), Positives = 287/314 (92%), Gaps = 0/314 (0%)

Query  1    VSALAFTILAVLLAGPTPALLARATWPLRAPRAAMVLWQAIALAAVLSSFSAGIAIASRL  60
            +SALAFTILAVLLAGPTPALLARATWPLRAPRAAMVLWQAI+LAAVLS+FSAGIAIA+RL
Sbjct  1    MSALAFTILAVLLAGPTPALLARATWPLRAPRAAMVLWQAISLAAVLSAFSAGIAIATRL  60

Query  61   LMPGPDGRPTTSFVGAAGRLGWPLWAAYITVFALTVLVGARLAVAVVRVATATRRRRAHH  120
            LMPGPDGRPT   + A GRLGWPLWAAY++VFALTVLVG RL VAVVRVA ATRRRRA H
Sbjct  61   LMPGPDGRPTAGIIDAEGRLGWPLWAAYVSVFALTVLVGVRLVVAVVRVAIATRRRRARH  120

Query  121  RMVVDLVGVGHNGALAQPCARARDLRVLDVAQPLAYCLPGVRSRVVVSEGTLTALADAEV  180
            RMVVDLVGVGH   LAQPCAR RDLRVL VAQPLAYCLPGVRSRVVVSEG LT L+D EV
Sbjct  121  RMVVDLVGVGHEATLAQPCARTRDLRVLHVAQPLAYCLPGVRSRVVVSEGALTTLSDEEV  180

Query  181  AAILTHERAHLRARHDLVLEAFTAVHAAFPRLVRSANALGAVQLLVELLADDAAVRAAGR  240
            AAILTHERAHLRARHDLVLEAFTA H AFPRLVRSANAL A QLLVELLADDAAVRAAGR
Sbjct  181  AAILTHERAHLRARHDLVLEAFTAFHEAFPRLVRSANALRAAQLLVELLADDAAVRAAGR  240

Query  241  TPLARALVACASGRAPSGALAVGGPSTVLRVRRLSGRGNSAVLSAAAYLAAAAVLVVPTV  300
            TPLARALVACASGRAP GALA GGPST++RV+RLSGRGNS  L+AAAY AAA VLVVPTV
Sbjct  241  TPLARALVACASGRAPLGALAAGGPSTLVRVQRLSGRGNSLALAAAAYAAAAVVLVVPTV  300

Query  301  ALAVPWLTQLQRLF  314
            ALAVPWLT+LQRLF
Sbjct  301  ALAVPWLTELQRLF  314


>gi|118618425|ref|YP_906757.1| hypothetical protein MUL_3034 [Mycobacterium ulcerans Agy99]
 gi|118570535|gb|ABL05286.1| conserved hypothetical transmembrane protein [Mycobacterium ulcerans 
Agy99]
Length=316

 Score =  431 bits (1109),  Expect = 6e-119, Method: Compositional matrix adjust.
 Identities = 273/314 (87%), Positives = 286/314 (92%), Gaps = 0/314 (0%)

Query  1    VSALAFTILAVLLAGPTPALLARATWPLRAPRAAMVLWQAIALAAVLSSFSAGIAIASRL  60
            +SALAFTILAVLLAGPTPALLARATWPLRAPRAAMVLWQAI+LAAVLS+FSAGIAIA+RL
Sbjct  1    MSALAFTILAVLLAGPTPALLARATWPLRAPRAAMVLWQAISLAAVLSAFSAGIAIATRL  60

Query  61   LMPGPDGRPTTSFVGAAGRLGWPLWAAYITVFALTVLVGARLAVAVVRVATATRRRRAHH  120
            LMPGPDGRPT   + A GRLGWPLWAAY++VFALTVLVG RL VAVVRVA ATRRRRA H
Sbjct  61   LMPGPDGRPTAGIIDAEGRLGWPLWAAYVSVFALTVLVGVRLVVAVVRVAIATRRRRARH  120

Query  121  RMVVDLVGVGHNGALAQPCARARDLRVLDVAQPLAYCLPGVRSRVVVSEGTLTALADAEV  180
            RMVVDLVGVGH   LAQPCAR RDLRVL VAQPLAYCLPGVRSRVVVSEG LT L+D EV
Sbjct  121  RMVVDLVGVGHEATLAQPCARTRDLRVLHVAQPLAYCLPGVRSRVVVSEGALTTLSDEEV  180

Query  181  AAILTHERAHLRARHDLVLEAFTAVHAAFPRLVRSANALGAVQLLVELLADDAAVRAAGR  240
            AAILTHERAHLRARHDLVLEAFTA H AFPRLVRSANAL A QLLVELLADD AVRAAGR
Sbjct  181  AAILTHERAHLRARHDLVLEAFTAFHEAFPRLVRSANALRAAQLLVELLADDPAVRAAGR  240

Query  241  TPLARALVACASGRAPSGALAVGGPSTVLRVRRLSGRGNSAVLSAAAYLAAAAVLVVPTV  300
            TPLARALVACASGRAP GALA GGPST++RV+RLSGRGNS  L+AAAY AAA VLVVPTV
Sbjct  241  TPLARALVACASGRAPLGALAAGGPSTLVRVQRLSGRGNSLALAAAAYAAAAVVLVVPTV  300

Query  301  ALAVPWLTQLQRLF  314
            ALAVPWLT+LQRLF
Sbjct  301  ALAVPWLTELQRLF  314


>gi|120404067|ref|YP_953896.1| peptidase M48, Ste24p [Mycobacterium vanbaalenii PYR-1]
 gi|119956885|gb|ABM13890.1| peptidase M48, Ste24p [Mycobacterium vanbaalenii PYR-1]
Length=311

 Score =  407 bits (1047),  Expect = 9e-112, Method: Compositional matrix adjust.
 Identities = 240/319 (76%), Positives = 271/319 (85%), Gaps = 11/319 (3%)

Query  1    VSALAFTILAVLLAGPTPALLARATWPLRAPRAAMVLWQAIALAAVLSSFSAGIAIASRL  60
            +SALAFTI+A+LL+GP PALLARA+WPLRAPRAA+VLWQ+IALAAVLS+FSAGIAIASRL
Sbjct  1    MSALAFTIVALLLSGPVPALLARASWPLRAPRAAIVLWQSIALAAVLSAFSAGIAIASRL  60

Query  61   LMPGPDGRPTTSFVGAAGRLGWPLWAAYITVFALTVLVGARLAVAVVRVATATRRRRAHH  120
             +PGPDGRPT + V     LGWPLW AY+ VF LT+++GARL V+V++VA ATRRRRAHH
Sbjct  61   FVPGPDGRPTATIVSEIEVLGWPLWTAYVVVFVLTLMIGARLIVSVLQVAIATRRRRAHH  120

Query  121  RMVVDLVGVGHNGALAQPCARARD---LRVLDVAQPLAYCLPGVRSRVVVSEGTLTALAD  177
            RMVVDLVG  H+        R R    LR+LDVA+PLAYCLPGVRSRVVVSEG L AL+D
Sbjct  121  RMVVDLVG-SHDH-------RHRSGAGLRILDVAEPLAYCLPGVRSRVVVSEGALKALSD  172

Query  178  AEVAAILTHERAHLRARHDLVLEAFTAVHAAFPRLVRSANALGAVQLLVELLADDAAVRA  237
             E+AAIL HE AHLRARHDLVLE FTAVHAAFPRLVRS +AL AV+LL+ELLADDAAVRA
Sbjct  173  NEMAAILEHEHAHLRARHDLVLEMFTAVHAAFPRLVRSGHALNAVRLLIELLADDAAVRA  232

Query  238  AGRTPLARALVACASGRAPSGALAVGGPSTVLRVRRLSGRGNSAVLSAAAYLAAAAVLVV  297
             G TPLARALVACASGRAP GALA GGP+TV+RVRRL G  NS +L+A AY+ AAAVLVV
Sbjct  233  EGPTPLARALVACASGRAPRGALAAGGPTTVVRVRRLGGAPNSRILAAGAYITAAAVLVV  292

Query  298  PTVALAVPWLTQLQRLFIA  316
            PTVALAVPWLT+LQRLF A
Sbjct  293  PTVALAVPWLTELQRLFSA  311


>gi|296164830|ref|ZP_06847388.1| integral membrane protein [Mycobacterium parascrofulaceum ATCC 
BAA-614]
 gi|295899796|gb|EFG79244.1| integral membrane protein [Mycobacterium parascrofulaceum ATCC 
BAA-614]
Length=252

 Score =  392 bits (1007),  Expect = 4e-107, Method: Compositional matrix adjust.
 Identities = 226/252 (90%), Positives = 234/252 (93%), Gaps = 0/252 (0%)

Query  1    VSALAFTILAVLLAGPTPALLARATWPLRAPRAAMVLWQAIALAAVLSSFSAGIAIASRL  60
            +SALAFTILAVLL GP PA+LARA+WPLRAPRAAMVLWQA+ALAAVLS+FSAGIAIA+RL
Sbjct  1    MSALAFTILAVLLVGPVPAMLARASWPLRAPRAAMVLWQAVALAAVLSAFSAGIAIATRL  60

Query  61   LMPGPDGRPTTSFVGAAGRLGWPLWAAYITVFALTVLVGARLAVAVVRVATATRRRRAHH  120
            LMPGPDGRPT S VG AGRLGWPLW AY+ VFALTVLVGARL VAVVRVA A RRRRAHH
Sbjct  61   LMPGPDGRPTASIVGDAGRLGWPLWVAYVGVFALTVLVGARLMVAVVRVAIANRRRRAHH  120

Query  121  RMVVDLVGVGHNGALAQPCARARDLRVLDVAQPLAYCLPGVRSRVVVSEGTLTALADAEV  180
            RMVVDLVGVGH  AL QPCAR RDLRVLDV QPLAYCLPGVRSRVVVSEG L+ LADAEV
Sbjct  121  RMVVDLVGVGHGAALPQPCARTRDLRVLDVPQPLAYCLPGVRSRVVVSEGALSTLADAEV  180

Query  181  AAILTHERAHLRARHDLVLEAFTAVHAAFPRLVRSANALGAVQLLVELLADDAAVRAAGR  240
            AAILTHERAHLRARHDLVLEAFTAVHAAFPRLVRSANALGAVQLLVELLADDAAVRAAGR
Sbjct  181  AAILTHERAHLRARHDLVLEAFTAVHAAFPRLVRSANALGAVQLLVELLADDAAVRAAGR  240

Query  241  TPLARALVACAS  252
             PLARALVACAS
Sbjct  241  APLARALVACAS  252


>gi|108799777|ref|YP_639974.1| peptidase M48, Ste24p [Mycobacterium sp. MCS]
 gi|119868887|ref|YP_938839.1| peptidase M48, Ste24p [Mycobacterium sp. KMS]
 gi|126435418|ref|YP_001071109.1| peptidase M48, Ste24p [Mycobacterium sp. JLS]
 gi|108770196|gb|ABG08918.1| peptidase M48, Ste24p [Mycobacterium sp. MCS]
 gi|119694976|gb|ABL92049.1| peptidase M48, Ste24p [Mycobacterium sp. KMS]
 gi|126235218|gb|ABN98618.1| peptidase M48, Ste24p [Mycobacterium sp. JLS]
Length=316

 Score =  388 bits (997),  Expect = 6e-106, Method: Compositional matrix adjust.
 Identities = 230/315 (74%), Positives = 263/315 (84%), Gaps = 0/315 (0%)

Query  1    VSALAFTILAVLLAGPTPALLARATWPLRAPRAAMVLWQAIALAAVLSSFSAGIAIASRL  60
            +SALAFT++A+LL GP PALLARA+WP+RAPRAA+VLWQ+IALA VLS+FSAGIAIASRL
Sbjct  1    MSALAFTLVALLLVGPVPALLARASWPMRAPRAAVVLWQSIALAGVLSAFSAGIAIASRL  60

Query  61   LMPGPDGRPTTSFVGAAGRLGWPLWAAYITVFALTVLVGARLAVAVVRVATATRRRRAHH  120
             +PGPDGRPT +       LGWPLW  Y+ VFALT+L+G RL V+V++VA ATRRRRAHH
Sbjct  61   FVPGPDGRPTATITSEIEVLGWPLWLLYVVVFALTLLIGVRLIVSVLQVAVATRRRRAHH  120

Query  121  RMVVDLVGVGHNGALAQPCARARDLRVLDVAQPLAYCLPGVRSRVVVSEGTLTALADAEV  180
            RM+VDL+GV  +        +A  LRVLDV QPLAYCLPGVRSRVV+S+G L  +   E+
Sbjct  121  RMMVDLLGVSRDSVPTDVRRQATGLRVLDVKQPLAYCLPGVRSRVVLSDGALKTMTRDEI  180

Query  181  AAILTHERAHLRARHDLVLEAFTAVHAAFPRLVRSANALGAVQLLVELLADDAAVRAAGR  240
            AAILTHERAHLRARHDLVLE FTAVHAAFPR VRSA+AL AV+LLVELLADDAAVR AG 
Sbjct  181  AAILTHERAHLRARHDLVLEMFTAVHAAFPRFVRSASALDAVRLLVELLADDAAVRTAGP  240

Query  241  TPLARALVACASGRAPSGALAVGGPSTVLRVRRLSGRGNSAVLSAAAYLAAAAVLVVPTV  300
            TPLARALVACA+GRAPSGALA GGPSTV+RVRRL G  NS  ++A AYLAAA VLV PTV
Sbjct  241  TPLARALVACAAGRAPSGALAAGGPSTVIRVRRLGGLPNSLAIAAVAYLAAAVVLVGPTV  300

Query  301  ALAVPWLTQLQRLFI  315
            A+AVPWLT+L RLFI
Sbjct  301  AVAVPWLTELHRLFI  315


>gi|333990580|ref|YP_004523194.1| hypothetical protein JDM601_1940 [Mycobacterium sp. JDM601]
 gi|333486548|gb|AEF35940.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=312

 Score =  385 bits (990),  Expect = 4e-105, Method: Compositional matrix adjust.
 Identities = 221/300 (74%), Positives = 249/300 (83%), Gaps = 4/300 (1%)

Query  15   GPTPALLARATWPLRAPRAAMVLWQAIALAAVLSSFSAGIAIASRLLMPGPDGRPTTSFV  74
            GP PALLARA WPLRAPRAA+VLWQAIA+AAVLS+FSAG+A +SRLLMPGPDGRPT++ +
Sbjct  15   GPVPALLARADWPLRAPRAAVVLWQAIAIAAVLSAFSAGVATSSRLLMPGPDGRPTSTIL  74

Query  75   GAAGRLGWPLWAAYITVFALTVLVGARLAVAVVRVATATRRRRAHHRMVVDLVGVGHNGA  134
            G+  RLGWPLW  Y  V A+T+LVG RL V V+RVA  TR+RRA HRM+VDLVGV  +GA
Sbjct  75   GSLDRLGWPLWTFYTAVSAVTLLVGLRLTVTVLRVAIGTRQRRARHRMLVDLVGVS-DGA  133

Query  135  LAQPCARARDLRVLDVAQPLAYCLPGVRSRVVVSEGTLTALADAEVAAILTHERAHLRAR  194
               P  R   LR+L V QPLAYCLPGVRSRVV+S G L AL+D E+AA+L HERAHLRAR
Sbjct  134  ---PAVRTSGLRILQVMQPLAYCLPGVRSRVVLSSGALQALSDTELAALLCHERAHLRAR  190

Query  195  HDLVLEAFTAVHAAFPRLVRSANALGAVQLLVELLADDAAVRAAGRTPLARALVACASGR  254
            HDLVLEAFTAVH+AFPRLVRSA+AL AV+LLVELLADDAAVR AG  PLARALV CAS  
Sbjct  191  HDLVLEAFTAVHSAFPRLVRSASALDAVRLLVELLADDAAVRVAGAPPLARALVTCASAT  250

Query  255  APSGALAVGGPSTVLRVRRLSGRGNSAVLSAAAYLAAAAVLVVPTVALAVPWLTQLQRLF  314
             P+GALA GG STVLRV+RLSGRGNS  L+AAAY AAA VL VPT+ALAVPWLT+L RL 
Sbjct  251  IPAGALAAGGASTVLRVQRLSGRGNSRTLAAAAYSAAAGVLTVPTIALAVPWLTELHRLI  310


>gi|118470290|ref|YP_887934.1| integral membrane protein [Mycobacterium smegmatis str. MC2 155]
 gi|118171577|gb|ABK72473.1| integral membrane protein [Mycobacterium smegmatis str. MC2 155]
Length=318

 Score =  385 bits (989),  Expect = 5e-105, Method: Compositional matrix adjust.
 Identities = 227/314 (73%), Positives = 259/314 (83%), Gaps = 0/314 (0%)

Query  1    VSALAFTILAVLLAGPTPALLARATWPLRAPRAAMVLWQAIALAAVLSSFSAGIAIASRL  60
            +SALAFT++A+ L GP PA+LARA+WPLRAPRAA+VLWQ+IALAAVLS+FSAGIAIASRL
Sbjct  1    MSALAFTLVALALVGPVPAMLARASWPLRAPRAAIVLWQSIALAAVLSAFSAGIAIASRL  60

Query  61   LMPGPDGRPTTSFVGAAGRLGWPLWAAYITVFALTVLVGARLAVAVVRVATATRRRRAHH  120
             +PG DGRPT +       LGWPLW  Y+ VF+LT+ +GARL VA+V+V  ATRRRRAHH
Sbjct  61   FVPGADGRPTATITSEIDVLGWPLWLLYVVVFSLTLFIGARLCVAIVQVGVATRRRRAHH  120

Query  121  RMVVDLVGVGHNGALAQPCARARDLRVLDVAQPLAYCLPGVRSRVVVSEGTLTALADAEV  180
            RM+VDL+    +   A     A  LR+LDVAQPLAYCLPGVRSRVVVSEGTL  L+  EV
Sbjct  121  RMMVDLLSKSRDAVPAHLRTPASGLRILDVAQPLAYCLPGVRSRVVVSEGTLDTLSPDEV  180

Query  181  AAILTHERAHLRARHDLVLEAFTAVHAAFPRLVRSANALGAVQLLVELLADDAAVRAAGR  240
             AILTHERAHLRARHDLVLE FTAVHAAFPR VRSA+AL AV+LL+ELLADDAAVR AG 
Sbjct  181  DAILTHERAHLRARHDLVLEMFTAVHAAFPRFVRSASALDAVRLLIELLADDAAVRIAGP  240

Query  241  TPLARALVACASGRAPSGALAVGGPSTVLRVRRLSGRGNSAVLSAAAYLAAAAVLVVPTV  300
            TPLARALV CA+GR PSGALA GGP+TV+RVRRL G+ NS  LS  AYLAA A+LVVPTV
Sbjct  241  TPLARALVTCAAGRTPSGALAAGGPTTVIRVRRLGGKPNSLTLSVIAYLAAVAILVVPTV  300

Query  301  ALAVPWLTQLQRLF  314
            A+AVPWLT+L RLF
Sbjct  301  AVAVPWLTELHRLF  314


>gi|54024486|ref|YP_118728.1| hypothetical protein nfa25170 [Nocardia farcinica IFM 10152]
 gi|54015994|dbj|BAD57364.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length=313

 Score =  384 bits (985),  Expect = 2e-104, Method: Compositional matrix adjust.
 Identities = 205/314 (66%), Positives = 248/314 (79%), Gaps = 7/314 (2%)

Query  2    SALAFTILAVLLAGPTPALLARATWPLRAPRAAMVLWQAIALAAVLSSFSAGIAIASRLL  61
            +A  F  LA+LLAGP PALL+RA WP R PRAA+VLWQAIALAAVLS+F +G+AIA+ LL
Sbjct  4    TAPVFAGLALLLAGPAPALLSRAKWPYRTPRAALVLWQAIALAAVLSAFGSGLAIAAELL  63

Query  62   MPGPDGRPTTSFVGAAGRLGWPLWAAYITVFALTVLVGARLAVAVVRVATATRRRRAHHR  121
            +PGPDGRPTTS       LG+PLW AY+ VFALT+LVGARL  ++VRV   TRRRRA HR
Sbjct  64   VPGPDGRPTTSPTREIDALGFPLWLAYVVVFALTLLVGARLIFSIVRVGVHTRRRRAKHR  123

Query  122  MVVDLVGVGHNGALAQPCARARDLRVLDVAQPLAYCLPGVRSRVVVSEGTLTALADAEVA  181
            M+VDL+    +G    P  RA D+RVL   +P+AYCLPG+R RVV+SEGTLT LAD EV 
Sbjct  124  MLVDLLD--QSG----PRRRAHDIRVLAATEPIAYCLPGLRQRVVLSEGTLTNLADPEVT  177

Query  182  AILTHERAHLRARHDLVLEAFTAVHAAFPRLVRSANALGAVQLLVELLADDAAVRAAGRT  241
            AI++HER+HLRARHDLVLEAFTAVH AFPR+VRS  ALG+V+LL+ELLADD+AV+  G  
Sbjct  178  AIVSHERSHLRARHDLVLEAFTAVHEAFPRVVRSKAALGSVKLLIELLADDSAVKVTGPA  237

Query  242  PLARALVACASGRAPSGALAVGGPSTVLRVRRLSGRGNSAV-LSAAAYLAAAAVLVVPTV  300
            PLARALVACA   AP GALA GGP+T++RV+RL   G+  V ++ AAYL + A+LVVPT+
Sbjct  238  PLARALVACAKSTAPQGALAAGGPTTLIRVQRLGQGGSGDVRIATAAYLGSIAILVVPTL  297

Query  301  ALAVPWLTQLQRLF  314
            A+AVPWL +L RLF
Sbjct  298  AVAVPWLVELSRLF  311


>gi|254821978|ref|ZP_05226979.1| integral membrane protein [Mycobacterium intracellulare ATCC 
13950]
Length=229

 Score =  377 bits (967),  Expect = 2e-102, Method: Compositional matrix adjust.
 Identities = 203/229 (89%), Positives = 213/229 (94%), Gaps = 0/229 (0%)

Query  1    VSALAFTILAVLLAGPTPALLARATWPLRAPRAAMVLWQAIALAAVLSSFSAGIAIASRL  60
            +SALAFTILAVLL GP PA+LARA WPLRAPRAAMVLWQA+ALAAVLS+FSAGIAIA+RL
Sbjct  1    MSALAFTILAVLLTGPVPAMLARARWPLRAPRAAMVLWQAVALAAVLSAFSAGIAIATRL  60

Query  61   LMPGPDGRPTTSFVGAAGRLGWPLWAAYITVFALTVLVGARLAVAVVRVATATRRRRAHH  120
            LMPGPDGRPTTS VGAA RLGWPLWAAYI VFALTVLVGARL VA+ RVA A R+RRAHH
Sbjct  61   LMPGPDGRPTTSIVGAADRLGWPLWAAYIGVFALTVLVGARLMVALARVAIANRKRRAHH  120

Query  121  RMVVDLVGVGHNGALAQPCARARDLRVLDVAQPLAYCLPGVRSRVVVSEGTLTALADAEV  180
            RMVVDLVGVGH+ AL+Q C R RDLRVLDV QPLAYCLPGVRSRVVVSEGTL+ LADAEV
Sbjct  121  RMVVDLVGVGHDAALSQSCTRTRDLRVLDVPQPLAYCLPGVRSRVVVSEGTLSTLADAEV  180

Query  181  AAILTHERAHLRARHDLVLEAFTAVHAAFPRLVRSANALGAVQLLVELL  229
            AAILTHERAHLRARHDLVLEAFTAVHAAFPRLVRSANALGAVQLLVELL
Sbjct  181  AAILTHERAHLRARHDLVLEAFTAVHAAFPRLVRSANALGAVQLLVELL  229


>gi|111024198|ref|YP_707170.1| hypothetical protein RHA1_ro07248 [Rhodococcus jostii RHA1]
 gi|110823728|gb|ABG99012.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length=317

 Score =  369 bits (948),  Expect = 2e-100, Method: Compositional matrix adjust.
 Identities = 210/315 (67%), Positives = 255/315 (81%), Gaps = 3/315 (0%)

Query  2    SALAFTILAVLLAGPTPALLARATWPLRAPRAAMVLWQAIALAAVLSSFSAGIAIASRLL  61
            +AL F +LA+LLAGP PALL+RA WP RAPRAA+VLWQAIALAAVLS+FS+G+AIAS+LL
Sbjct  5    TALVFGVLALLLAGPVPALLSRARWPHRAPRAALVLWQAIALAAVLSAFSSGLAIASQLL  64

Query  62   MPGPDGRPTTSFVGAAGRLGWPLWAAYITVFALTVLVGARLAVAVVRVATATRRRRAHHR  121
            +PGPDGRPTT+ V     LG PLW  Y+ VFALT+LVGA+L  A+V+V   TRRRRA HR
Sbjct  65   VPGPDGRPTTAPVAEIDALGLPLWLLYVVVFALTLLVGAKLIFAIVQVGVRTRRRRARHR  124

Query  122  MVVDLVGVGHNGALAQPCARARDLRVLDVAQPLAYCLPGVRSRVVVSEGTLTALADAEVA  181
            M+VDL+    +   + P AR  DLRVLDV +P+AYCLPG+R RVV+S+GT T L DAE+ 
Sbjct  125  MLVDLLDRCDS---SSPLARTPDLRVLDVTEPIAYCLPGLRQRVVLSQGTFTNLDDAEIT  181

Query  182  AILTHERAHLRARHDLVLEAFTAVHAAFPRLVRSANALGAVQLLVELLADDAAVRAAGRT  241
            AILTHER+HLRARHDLVLEAFTAV+AAFP +VRS +ALG+VQLLVE+LADD+AVRA G T
Sbjct  182  AILTHERSHLRARHDLVLEAFTAVNAAFPTVVRSKSALGSVQLLVEMLADDSAVRATGPT  241

Query  242  PLARALVACASGRAPSGALAVGGPSTVLRVRRLSGRGNSAVLSAAAYLAAAAVLVVPTVA  301
             LARALVAC+   AP GA+A GGPST+LRV+RL+       ++ AAY A+ A+LVVPT+A
Sbjct  242  ALARALVACSGSIAPKGAMAAGGPSTLLRVQRLASTEAGTPVALAAYAASVAILVVPTIA  301

Query  302  LAVPWLTQLQRLFIA  316
            +AVPWLT+L RLF A
Sbjct  302  VAVPWLTELSRLFSA  316


>gi|169629500|ref|YP_001703149.1| hypothetical protein MAB_2414c [Mycobacterium abscessus ATCC 
19977]
 gi|169241467|emb|CAM62495.1| Conserved hypothetical protein (peptidase?) [Mycobacterium abscessus]
Length=321

 Score =  369 bits (946),  Expect = 4e-100, Method: Compositional matrix adjust.
 Identities = 210/305 (69%), Positives = 241/305 (80%), Gaps = 5/305 (1%)

Query  15   GPTPALLARATWPLRAPRAAMVLWQAIALAAVLSSFSAGIAIASRLLMPGPDGRPTTSFV  74
            GP PALLARA WP RAPRAAMVLWQAIA+AAVLS+FS+G+AIASRLL+PGPDG PT +  
Sbjct  15   GPVPALLARARWPYRAPRAAMVLWQAIAVAAVLSAFSSGLAIASRLLVPGPDGHPTATIT  74

Query  75   GAAGRLGWPLWAAYITVFALTVLVGARLAVAVVRVATATRRRRAHHRMVVDLVG-----V  129
            G   RLGW LW  Y+TVFA+T+L+G RL V+VVRV   TRRRRA HR +VDL+       
Sbjct  75   GEIDRLGWGLWLLYVTVFAITILIGVRLMVSVVRVGVRTRRRRARHRAIVDLLDHKRYCE  134

Query  130  GHNGALAQPCARARDLRVLDVAQPLAYCLPGVRSRVVVSEGTLTALADAEVAAILTHERA  189
               G       R  DLRVL+V +PLAYCLPGVRSRVVVSEGTL+ L   EV AI+ HERA
Sbjct  135  NWRGGYDINRRRDHDLRVLEVDEPLAYCLPGVRSRVVVSEGTLSTLGHNEVTAIVAHERA  194

Query  190  HLRARHDLVLEAFTAVHAAFPRLVRSANALGAVQLLVELLADDAAVRAAGRTPLARALVA  249
            HLRARHDLVLEAFTAVH AFP +VRS +AL AV+LLVELLADDAAVR AG TPLARALVA
Sbjct  195  HLRARHDLVLEAFTAVHDAFPVIVRSKSALDAVKLLVELLADDAAVRTAGPTPLARALVA  254

Query  250  CASGRAPSGALAVGGPSTVLRVRRLSGRGNSAVLSAAAYLAAAAVLVVPTVALAVPWLTQ  309
            CA G  P GA+A GGP+T++RVRRL G GNS +LS +AY AAAA+LVVPT+A+ +PW T+
Sbjct  255  CAGGPTPVGAMAAGGPTTLIRVRRLGGSGNSLLLSCSAYTAAAAILVVPTLAVVIPWFTE  314

Query  310  LQRLF  314
            LQRLF
Sbjct  315  LQRLF  319


>gi|226366441|ref|YP_002784224.1| hypothetical protein ROP_70320 [Rhodococcus opacus B4]
 gi|226244931|dbj|BAH55279.1| hypothetical protein [Rhodococcus opacus B4]
Length=317

 Score =  367 bits (942),  Expect = 1e-99, Method: Compositional matrix adjust.
 Identities = 209/315 (67%), Positives = 253/315 (81%), Gaps = 3/315 (0%)

Query  2    SALAFTILAVLLAGPTPALLARATWPLRAPRAAMVLWQAIALAAVLSSFSAGIAIASRLL  61
            +AL F +LA+LLAGP PALL+RA WP  APRAA+VLWQAIALAAVLS+FS+G+AIAS+LL
Sbjct  5    TALVFGVLALLLAGPVPALLSRARWPHHAPRAALVLWQAIALAAVLSAFSSGLAIASQLL  64

Query  62   MPGPDGRPTTSFVGAAGRLGWPLWAAYITVFALTVLVGARLAVAVVRVATATRRRRAHHR  121
            +PGPDGRPTT+ V     LG PLW  Y+ VFALT+LVGA+L  A+V+V   TRRRRA HR
Sbjct  65   VPGPDGRPTTAPVAEIDALGLPLWLLYVVVFALTLLVGAKLIFAIVQVGVRTRRRRARHR  124

Query  122  MVVDLVGVGHNGALAQPCARARDLRVLDVAQPLAYCLPGVRSRVVVSEGTLTALADAEVA  181
            M+VDL+    +     P AR  DLRVLDV +P+AYCLPG+R RVV+S+GT   L DAE+ 
Sbjct  125  MLVDLLDRCDS---TSPLARTPDLRVLDVTEPIAYCLPGLRQRVVLSQGTFANLDDAEIT  181

Query  182  AILTHERAHLRARHDLVLEAFTAVHAAFPRLVRSANALGAVQLLVELLADDAAVRAAGRT  241
            AILTHER+HLRARHDLVLEAFTAV+AAFP +VRS +ALG+VQLLVE+LADD+AVRA G T
Sbjct  182  AILTHERSHLRARHDLVLEAFTAVNAAFPTVVRSKSALGSVQLLVEMLADDSAVRATGPT  241

Query  242  PLARALVACASGRAPSGALAVGGPSTVLRVRRLSGRGNSAVLSAAAYLAAAAVLVVPTVA  301
             LARALVAC+   AP GA+A GGPST+LRV+RL+    S  ++ AAY A+ A+LVVPT+A
Sbjct  242  ALARALVACSGSIAPKGAMAAGGPSTLLRVQRLASTEQSTRVALAAYAASVAILVVPTIA  301

Query  302  LAVPWLTQLQRLFIA  316
            +AVPWLT+L RLF A
Sbjct  302  VAVPWLTELSRLFSA  316


>gi|145223944|ref|YP_001134622.1| peptidase M48, Ste24p [Mycobacterium gilvum PYR-GCK]
 gi|145216430|gb|ABP45834.1| peptidase M48, Ste24p [Mycobacterium gilvum PYR-GCK]
Length=311

 Score =  365 bits (936),  Expect = 6e-99, Method: Compositional matrix adjust.
 Identities = 222/301 (74%), Positives = 251/301 (84%), Gaps = 5/301 (1%)

Query  15   GPTPALLARATWPLRAPRAAMVLWQAIALAAVLSSFSAGIAIASRLLMPGPDGRPTTSFV  74
            GP PA+LARA WPLRAPRAA+VLWQ+IA AAVLS+FSAGIAIASRL +PGPDGRPT++ V
Sbjct  15   GPVPAMLARAAWPLRAPRAAIVLWQSIAAAAVLSAFSAGIAIASRLFVPGPDGRPTSTIV  74

Query  75   GAAGRLGWPLWAAYITVFALTVLVGARLAVAVVRVATATRRRRAHHRMVVDLVGVGHNGA  134
            G    LGWPLW AY+ VF LT+++GARL V+V+ VA ATRRRRAHHRMVVDLVG  H+  
Sbjct  75   GEIAVLGWPLWTAYVVVFLLTLVIGARLVVSVLNVAIATRRRRAHHRMVVDLVGAHHSRT  134

Query  135  LAQPCARARDLRVLDVAQPLAYCLPGVRSRVVVSEGTLTALADAEVAAILTHERAHLRAR  194
             ++   R     VLDV +PLAYCLPGVRSRVVVSEG L  LAD E++AIL HE AHLRAR
Sbjct  135  RSRSSLR-----VLDVDEPLAYCLPGVRSRVVVSEGALKTLADNEMSAILEHEHAHLRAR  189

Query  195  HDLVLEAFTAVHAAFPRLVRSANALGAVQLLVELLADDAAVRAAGRTPLARALVACASGR  254
            HDLVLE FTAVHAAFPRLVRS +AL AV+LL+ELLADDAAVRA G TPLARALVACASGR
Sbjct  190  HDLVLEMFTAVHAAFPRLVRSGHALNAVRLLIELLADDAAVRAEGPTPLARALVACASGR  249

Query  255  APSGALAVGGPSTVLRVRRLSGRGNSAVLSAAAYLAAAAVLVVPTVALAVPWLTQLQRLF  314
            AP GALA GGP+TV+RVRRL G+ NS +L+A AY AAAAVLVVPTVA AVPWL +L RLF
Sbjct  250  APRGALAAGGPTTVVRVRRLGGKPNSRMLAAGAYAAAAAVLVVPTVAFAVPWLNELHRLF  309

Query  315  I  315
            +
Sbjct  310  L  310


>gi|333920789|ref|YP_004494370.1| hypothetical protein AS9A_3125 [Amycolicicoccus subflavus DQS3-9A1]
 gi|333483010|gb|AEF41570.1| hypothetical protein AS9A_3125 [Amycolicicoccus subflavus DQS3-9A1]
Length=319

 Score =  364 bits (935),  Expect = 9e-99, Method: Compositional matrix adjust.
 Identities = 194/300 (65%), Positives = 228/300 (76%), Gaps = 3/300 (1%)

Query  15   GPTPALLARATWPLRAPRAAMVLWQAIALAAVLSSFSAGIAIASRLLMPGPDGRPTTSFV  74
            GP PALL+RA WPLRAPRAA+VLWQ+IALAAVLS+FS+G+AIAS LL+PGPDGRPTTS  
Sbjct  18   GPVPALLSRARWPLRAPRAALVLWQSIALAAVLSAFSSGLAIASMLLVPGPDGRPTTSPT  77

Query  75   GAAGRLGWPLWAAYITVFALTVLVGARLAVAVVRVATATRRRRAHHRMVVDLVGVGHNGA  134
                 LG PLW   ++VFALTVL+GARL  +  RVA  TRRRRAHHRM+VDL+       
Sbjct  78   DEISALGLPLWMLSVSVFALTVLIGARLLYSTARVAIKTRRRRAHHRMLVDLLD--QRDP  135

Query  135  LAQPCARARDLRVLDVAQPLAYCLPGVRSRVVVSEGTLTALADAEVAAILTHERAHLRAR  194
                 ++A DLRVL   +P+AYCLPG++ RVVVSEGTL  L   E+ AIL HERAHLRAR
Sbjct  136  RLTGLSKA-DLRVLQHQEPMAYCLPGLKQRVVVSEGTLDQLEPDELDAILAHERAHLRAR  194

Query  195  HDLVLEAFTAVHAAFPRLVRSANALGAVQLLVELLADDAAVRAAGRTPLARALVACASGR  254
            HDLVLEAFTAVH AFPR VRS  ALG+V+LL+ELLADDAA+R  G  PLA ALV CAS +
Sbjct  195  HDLVLEAFTAVHEAFPRFVRSKTALGSVRLLIELLADDAALRTTGPRPLAHALVTCASSK  254

Query  255  APSGALAVGGPSTVLRVRRLSGRGNSAVLSAAAYLAAAAVLVVPTVALAVPWLTQLQRLF  314
             P GA+A GGPSTV+RVRRL+       +S AAY  AA ++V PT+A+AVPWL +L RLF
Sbjct  255  TPEGAMAAGGPSTVVRVRRLAEGTYDGRISVAAYSVAALIMVGPTIAVAVPWLVELSRLF  314


>gi|289750418|ref|ZP_06509796.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
 gi|289691005|gb|EFD58434.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
Length=193

 Score =  363 bits (933),  Expect = 2e-98, Method: Compositional matrix adjust.
 Identities = 193/193 (100%), Positives = 193/193 (100%), Gaps = 0/193 (0%)

Query  124  VDLVGVGHNGALAQPCARARDLRVLDVAQPLAYCLPGVRSRVVVSEGTLTALADAEVAAI  183
            VDLVGVGHNGALAQPCARARDLRVLDVAQPLAYCLPGVRSRVVVSEGTLTALADAEVAAI
Sbjct  1    VDLVGVGHNGALAQPCARARDLRVLDVAQPLAYCLPGVRSRVVVSEGTLTALADAEVAAI  60

Query  184  LTHERAHLRARHDLVLEAFTAVHAAFPRLVRSANALGAVQLLVELLADDAAVRAAGRTPL  243
            LTHERAHLRARHDLVLEAFTAVHAAFPRLVRSANALGAVQLLVELLADDAAVRAAGRTPL
Sbjct  61   LTHERAHLRARHDLVLEAFTAVHAAFPRLVRSANALGAVQLLVELLADDAAVRAAGRTPL  120

Query  244  ARALVACASGRAPSGALAVGGPSTVLRVRRLSGRGNSAVLSAAAYLAAAAVLVVPTVALA  303
            ARALVACASGRAPSGALAVGGPSTVLRVRRLSGRGNSAVLSAAAYLAAAAVLVVPTVALA
Sbjct  121  ARALVACASGRAPSGALAVGGPSTVLRVRRLSGRGNSAVLSAAAYLAAAAVLVVPTVALA  180

Query  304  VPWLTQLQRLFIA  316
            VPWLTQLQRLFIA
Sbjct  181  VPWLTQLQRLFIA  193


>gi|315444276|ref|YP_004077155.1| Zn-dependent protease with chaperone function [Mycobacterium 
sp. Spyr1]
 gi|315262579|gb|ADT99320.1| Zn-dependent protease with chaperone function [Mycobacterium 
sp. Spyr1]
Length=311

 Score =  363 bits (932),  Expect = 2e-98, Method: Compositional matrix adjust.
 Identities = 222/301 (74%), Positives = 251/301 (84%), Gaps = 5/301 (1%)

Query  15   GPTPALLARATWPLRAPRAAMVLWQAIALAAVLSSFSAGIAIASRLLMPGPDGRPTTSFV  74
            GP PA+LARA WPLRAPRAA+VLWQ+IA AAVLS+FSAGIAIASRL +PGPDGRPT++ V
Sbjct  15   GPVPAMLARAAWPLRAPRAAIVLWQSIAAAAVLSAFSAGIAIASRLFVPGPDGRPTSTIV  74

Query  75   GAAGRLGWPLWAAYITVFALTVLVGARLAVAVVRVATATRRRRAHHRMVVDLVGVGHNGA  134
            G    LGWPLW AY+ VF LT+++GARL V+V+ VA ATRRRRAHHRMVVDLVG  H+  
Sbjct  75   GEIAVLGWPLWTAYVVVFLLTLVIGARLVVSVLNVAIATRRRRAHHRMVVDLVGAHHSRT  134

Query  135  LAQPCARARDLRVLDVAQPLAYCLPGVRSRVVVSEGTLTALADAEVAAILTHERAHLRAR  194
             ++   R     VLDV +PLAYCLPGVRSRVVVSEG L  LAD E++AIL HE AHLRAR
Sbjct  135  RSRSSLR-----VLDVDEPLAYCLPGVRSRVVVSEGALKTLADNEMSAILEHEHAHLRAR  189

Query  195  HDLVLEAFTAVHAAFPRLVRSANALGAVQLLVELLADDAAVRAAGRTPLARALVACASGR  254
            HDLVLE FTAVHAAFPRLVRS +AL AV+LL+ELLADDAAVRA G TPLARALVACASGR
Sbjct  190  HDLVLEMFTAVHAAFPRLVRSGHALNAVRLLIELLADDAAVRAEGPTPLARALVACASGR  249

Query  255  APSGALAVGGPSTVLRVRRLSGRGNSAVLSAAAYLAAAAVLVVPTVALAVPWLTQLQRLF  314
            AP GALA GGP+TV+RVRRL G+ NS +L+A AY AAAAVLVVPTVA AVPWL +L RLF
Sbjct  250  APRGALAAGGPTTVVRVRRLGGKPNSRMLAAGAYGAAAAVLVVPTVAFAVPWLNELHRLF  309

Query  315  I  315
            +
Sbjct  310  L  310


>gi|326384953|ref|ZP_08206627.1| peptidase M48 Ste24p [Gordonia neofelifaecis NRRL B-59395]
 gi|326196343|gb|EGD53543.1| peptidase M48 Ste24p [Gordonia neofelifaecis NRRL B-59395]
Length=312

 Score =  352 bits (902),  Expect = 6e-95, Method: Compositional matrix adjust.
 Identities = 185/314 (59%), Positives = 231/314 (74%), Gaps = 5/314 (1%)

Query  1    VSALAFTILAVLLAGPTPALLARATWPLRAPRAAMVLWQAIALAAVLSSFSAGIAIASRL  60
            ++AL F IL + L GP P+ L+RATWPL APRAAM LWQ+IALAAVLS+FS G+AIA+ L
Sbjct  1    MTALLFGILTIALVGPIPSALSRATWPLYAPRAAMTLWQSIALAAVLSAFSTGLAIAANL  60

Query  61   LMPGPDGRPTTSFVGAAGRLGWPLWAAYITVFALTVLVGARLAVAVVRVATATRRRRAHH  120
            L PGPDG PT++      RLGW LW  Y+ VFA+T+L+GARL   V+RV   TR RR  H
Sbjct  61   LSPGPDGAPTSNPFEEIHRLGWFLWTVYVAVFAVTLLIGARLMYTVLRVGIRTRARRNAH  120

Query  121  RMVVDLVGVGHNGALAQPCARARDLRVLDVAQPLAYCLPGVRSRVVVSEGTLTALADAEV  180
            R ++DLV       + +     RD+R+LDV  PLAYCLPG+R RVV+SEG L  L D E+
Sbjct  121  RQLIDLVD-----NVDRRLEAGRDIRILDVPAPLAYCLPGLRRRVVLSEGVLARLDDREL  175

Query  181  AAILTHERAHLRARHDLVLEAFTAVHAAFPRLVRSANALGAVQLLVELLADDAAVRAAGR  240
            AA++ HERAHLRARHDLVLEAF A+H AFPR VRS +ALG+V+LL E LADD A RA   
Sbjct  176  AAVIEHERAHLRARHDLVLEAFIALHEAFPRFVRSKSALGSVELLAEALADDQAARATTP  235

Query  241  TPLARALVACASGRAPSGALAVGGPSTVLRVRRLSGRGNSAVLSAAAYLAAAAVLVVPTV  300
            T L RALVACA   AP GA+AVGGP+T++RVRRL+   ++  +S  AY  AAA+L++PT+
Sbjct  236  TTLGRALVACADATAPRGAMAVGGPTTLVRVRRLAYLHSARTISVTAYTLAAAILIIPTM  295

Query  301  ALAVPWLTQLQRLF  314
            A+A+PWLT+L RL 
Sbjct  296  AVAIPWLTELSRLI  309


>gi|325676738|ref|ZP_08156411.1| peptidase M48, Ste24p [Rhodococcus equi ATCC 33707]
 gi|325552286|gb|EGD21975.1| peptidase M48, Ste24p [Rhodococcus equi ATCC 33707]
Length=319

 Score =  348 bits (894),  Expect = 5e-94, Method: Compositional matrix adjust.
 Identities = 198/302 (66%), Positives = 239/302 (80%), Gaps = 3/302 (0%)

Query  15   GPTPALLARATWPLRAPRAAMVLWQAIALAAVLSSFSAGIAIASRLLMPGPDGRPTTSFV  74
            GP PALL+RA WP RAPRAA+VLWQAIALAAVLS+FS+G+AIAS+LL+PGPDGRPTT   
Sbjct  18   GPVPALLSRARWPFRAPRAALVLWQAIALAAVLSAFSSGLAIASQLLVPGPDGRPTTEPT  77

Query  75   GAAGRLGWPLWAAYITVFALTVLVGARLAVAVVRVATATRRRRAHHRMVVDLVGVGHNGA  134
                 LG PLW  Y+ VF LT+L+GA+L  ++VRV   TRRRRA HRM+VDL+     G 
Sbjct  78   AEIDALGLPLWILYVVVFGLTLLIGAKLIFSMVRVGVHTRRRRARHRMLVDLL---DRGD  134

Query  135  LAQPCARARDLRVLDVAQPLAYCLPGVRSRVVVSEGTLTALADAEVAAILTHERAHLRAR  194
            ++        +RVLD A+P+AYCLPG+R RVV+SEGTL +L DAEV AILTHER+HLRAR
Sbjct  135  ISTALGTFPGVRVLDAAEPIAYCLPGLRQRVVLSEGTLNSLNDAEVTAILTHERSHLRAR  194

Query  195  HDLVLEAFTAVHAAFPRLVRSANALGAVQLLVELLADDAAVRAAGRTPLARALVACASGR  254
            HDLVLEAFTAVH AFPR+VRS +ALG+VQLLVELLADD+AV+  G  PLARALVACA   
Sbjct  195  HDLVLEAFTAVHHAFPRVVRSKSALGSVQLLVELLADDSAVKVTGPGPLARALVACAGST  254

Query  255  APSGALAVGGPSTVLRVRRLSGRGNSAVLSAAAYLAAAAVLVVPTVALAVPWLTQLQRLF  314
            AP GA+A GGPST++RV+RL+       ++AAAY+ AAA+LVVPT+A+AVPWL +L RLF
Sbjct  255  APRGAMAAGGPSTLVRVQRLTDSVGDIRIAAAAYVGAAAILVVPTIAVAVPWLVELSRLF  314

Query  315  IA  316
             A
Sbjct  315  SA  316


>gi|262202664|ref|YP_003273872.1| peptidase M48 Ste24p [Gordonia bronchialis DSM 43247]
 gi|262086011|gb|ACY21979.1| peptidase M48 Ste24p [Gordonia bronchialis DSM 43247]
Length=316

 Score =  348 bits (894),  Expect = 5e-94, Method: Compositional matrix adjust.
 Identities = 185/313 (60%), Positives = 230/313 (74%), Gaps = 1/313 (0%)

Query  1    VSALAFTILAVLLAGPTPALLARATWPLRAPRAAMVLWQAIALAAVLSSFSAGIAIASRL  60
            ++AL F IL V+L GP P  L+RA WP+RAPRAAM LWQAIALAAVLS+FS G+AIA+ L
Sbjct  1    MTALLFGILTVVLVGPAPEALSRAQWPIRAPRAAMTLWQAIALAAVLSAFSCGLAIAANL  60

Query  61   LMPGPDGRPTTSFVGAAGRLGWPLWAAYITVFALTVLVGARLAVAVVRVATATRRRRAHH  120
            L PG DG PTT  +    R+G PLW+ Y+ VFALT+L+G RL    +RV   TR RRA H
Sbjct  61   LAPGRDGTPTTHPLHEIERIGLPLWSVYVGVFALTLLIGGRLVFTTIRVGLRTRARRASH  120

Query  121  RMVVDLVGVGHNGALAQPCARARDLRVLDVAQPLAYCLPGVRSRVVVSEGTLTALADAEV  180
            R ++D++        + P   ARD+R++DV QPLAYCLPG+R RVVVSEG +  L   E+
Sbjct  121  RQLIDILDRCDRSDASHPLF-ARDVRMIDVEQPLAYCLPGLRQRVVVSEGVVHRLTRDEL  179

Query  181  AAILTHERAHLRARHDLVLEAFTAVHAAFPRLVRSANALGAVQLLVELLADDAAVRAAGR  240
             A++ HERAHLRARHDLVLEAF A+H AFPR VRS++AL AV+LLVE LADD AVRA   
Sbjct  180  IAVIAHERAHLRARHDLVLEAFIALHEAFPRFVRSSSALDAVELLVEALADDQAVRATTP  239

Query  241  TPLARALVACASGRAPSGALAVGGPSTVLRVRRLSGRGNSAVLSAAAYLAAAAVLVVPTV  300
            T L RALVACA   AP GA+AVGGP+T+ RV RL    ++ +++  AY  AAA+LVVPT+
Sbjct  240  TTLGRALVACADAVAPRGAMAVGGPTTLARVHRLRDDRSTRLVAITAYCGAAAILVVPTL  299

Query  301  ALAVPWLTQLQRL  313
            A+A+PWLT+L RL
Sbjct  300  AVAIPWLTELSRL  312


>gi|312139810|ref|YP_004007146.1| metallopeptidase [Rhodococcus equi 103S]
 gi|311889149|emb|CBH48462.1| putative secreted metallopeptidase [Rhodococcus equi 103S]
Length=319

 Score =  348 bits (893),  Expect = 6e-94, Method: Compositional matrix adjust.
 Identities = 197/300 (66%), Positives = 238/300 (80%), Gaps = 3/300 (1%)

Query  15   GPTPALLARATWPLRAPRAAMVLWQAIALAAVLSSFSAGIAIASRLLMPGPDGRPTTSFV  74
            GP PALL+RA WP RAPRAA+VLWQAIALAAVLS+FS+G+AIAS+LL+PGPDGRPTT   
Sbjct  18   GPVPALLSRARWPFRAPRAALVLWQAIALAAVLSAFSSGLAIASQLLVPGPDGRPTTEPT  77

Query  75   GAAGRLGWPLWAAYITVFALTVLVGARLAVAVVRVATATRRRRAHHRMVVDLVGVGHNGA  134
                 LG PLW  Y+ VF LT+L+GA+L  ++VRV   TRRRRA HRM+VDL+     G 
Sbjct  78   AEIDALGLPLWILYVVVFGLTLLIGAKLIFSMVRVGVHTRRRRARHRMLVDLL---DRGD  134

Query  135  LAQPCARARDLRVLDVAQPLAYCLPGVRSRVVVSEGTLTALADAEVAAILTHERAHLRAR  194
            ++        +RVLD A+P+AYCLPG+R RVV+SEGTL +L DAEV AILTHER+HLRAR
Sbjct  135  ISTALGTFPGVRVLDAAEPIAYCLPGLRQRVVLSEGTLNSLNDAEVTAILTHERSHLRAR  194

Query  195  HDLVLEAFTAVHAAFPRLVRSANALGAVQLLVELLADDAAVRAAGRTPLARALVACASGR  254
            HDLVLEAFTAVH AFPR+VRS +ALG+VQLLVELLADD+AV+  G  PLARALVACA   
Sbjct  195  HDLVLEAFTAVHHAFPRVVRSKSALGSVQLLVELLADDSAVKVTGPGPLARALVACAGST  254

Query  255  APSGALAVGGPSTVLRVRRLSGRGNSAVLSAAAYLAAAAVLVVPTVALAVPWLTQLQRLF  314
            AP GA+A GGPST++RV+RL+       ++AAAY+ AAA+LVVPT+A+AVPWL +L RLF
Sbjct  255  APRGAMAAGGPSTLVRVQRLTDSVGDIRIAAAAYVGAAAILVVPTIAVAVPWLVELSRLF  314


>gi|240172023|ref|ZP_04750682.1| hypothetical protein MkanA1_22095 [Mycobacterium kansasii ATCC 
12478]
Length=235

 Score =  348 bits (892),  Expect = 9e-94, Method: Compositional matrix adjust.
 Identities = 209/235 (89%), Positives = 215/235 (92%), Gaps = 0/235 (0%)

Query  1    VSALAFTILAVLLAGPTPALLARATWPLRAPRAAMVLWQAIALAAVLSSFSAGIAIASRL  60
            +SALAF ILAVLLAGPTPALLARATWPLRAPRAAMVLWQAIALAA LS+FSAGIAIASRL
Sbjct  1    MSALAFIILAVLLAGPTPALLARATWPLRAPRAAMVLWQAIALAAALSAFSAGIAIASRL  60

Query  61   LMPGPDGRPTTSFVGAAGRLGWPLWAAYITVFALTVLVGARLAVAVVRVATATRRRRAHH  120
            LMPG DGRPT   + A  RLGWPLWAAYITVFALTVLVG RL VA+VRVA ATRRRRAHH
Sbjct  61   LMPGADGRPTAGVLDARIRLGWPLWAAYITVFALTVLVGTRLMVAIVRVAIATRRRRAHH  120

Query  121  RMVVDLVGVGHNGALAQPCARARDLRVLDVAQPLAYCLPGVRSRVVVSEGTLTALADAEV  180
            RMVVDLVGVGH  ALA+PCAR RDLRVL+VAQPLAYCLPGVRSRVVVSEGTLT L   EV
Sbjct  121  RMVVDLVGVGHGAALAEPCARTRDLRVLNVAQPLAYCLPGVRSRVVVSEGTLTTLTHKEV  180

Query  181  AAILTHERAHLRARHDLVLEAFTAVHAAFPRLVRSANALGAVQLLVELLADDAAV  235
            AAILTHERAHLRARHDLVLEAFTAVHAAFPRLVRSANAL AVQLLVELLADDAAV
Sbjct  181  AAILTHERAHLRARHDLVLEAFTAVHAAFPRLVRSANALRAVQLLVELLADDAAV  235


>gi|289745723|ref|ZP_06505101.1| conserved membrane protein [Mycobacterium tuberculosis 02_1987]
 gi|289686251|gb|EFD53739.1| conserved membrane protein [Mycobacterium tuberculosis 02_1987]
Length=186

 Score =  347 bits (891),  Expect = 1e-93, Method: Compositional matrix adjust.
 Identities = 183/184 (99%), Positives = 184/184 (100%), Gaps = 0/184 (0%)

Query  1    VSALAFTILAVLLAGPTPALLARATWPLRAPRAAMVLWQAIALAAVLSSFSAGIAIASRL  60
            +SALAFTILAVLLAGPTPALLARATWPLRAPRAAMVLWQAIALAAVLSSFSAGIAIASRL
Sbjct  1    MSALAFTILAVLLAGPTPALLARATWPLRAPRAAMVLWQAIALAAVLSSFSAGIAIASRL  60

Query  61   LMPGPDGRPTTSFVGAAGRLGWPLWAAYITVFALTVLVGARLAVAVVRVATATRRRRAHH  120
            LMPGPDGRPTTSFVGAAGRLGWPLWAAYITVFALTVLVGARLAVAVVRVATATRRRRAHH
Sbjct  61   LMPGPDGRPTTSFVGAAGRLGWPLWAAYITVFALTVLVGARLAVAVVRVATATRRRRAHH  120

Query  121  RMVVDLVGVGHNGALAQPCARARDLRVLDVAQPLAYCLPGVRSRVVVSEGTLTALADAEV  180
            RMVVDLVGVGHNGALAQPCARARDLRVLDVAQPLAYCLPGVRSRVVVSEGTLTALADAEV
Sbjct  121  RMVVDLVGVGHNGALAQPCARARDLRVLDVAQPLAYCLPGVRSRVVVSEGTLTALADAEV  180

Query  181  AAIL  184
            AAIL
Sbjct  181  AAIL  184


>gi|343928476|ref|ZP_08767924.1| hypothetical protein GOALK_117_00820 [Gordonia alkanivorans NBRC 
16433]
 gi|343761661|dbj|GAA14850.1| hypothetical protein GOALK_117_00820 [Gordonia alkanivorans NBRC 
16433]
Length=316

 Score =  333 bits (853),  Expect = 3e-89, Method: Compositional matrix adjust.
 Identities = 182/316 (58%), Positives = 225/316 (72%), Gaps = 1/316 (0%)

Query  1    VSALAFTILAVLLAGPTPALLARATWPLRAPRAAMVLWQAIALAAVLSSFSAGIAIASRL  60
            ++AL F I++++LAGP P  L+RA WP+RAPRAAM LWQAIALAAVLS+FS G+AIA+ L
Sbjct  1    MTALLFGIVSLVLAGPVPEALSRAQWPIRAPRAAMTLWQAIALAAVLSAFSCGLAIAANL  60

Query  61   LMPGPDGRPTTSFVGAAGRLGWPLWAAYITVFALTVLVGARLAVAVVRVATATRRRRAHH  120
            L+ G DG PTT  +    RLG PLW   + VF LT+LVGARL    +RV   TR RR  H
Sbjct  61   LVIGADGTPTTHPLREIDRLGLPLWLTCVGVFILTLLVGARLFYTTIRVGLRTRARRKAH  120

Query  121  RMVVDLVGVGHNGALAQPCARARDLRVLDVAQPLAYCLPGVRSRVVVSEGTLTALADAEV  180
            R ++D++          P   ARD+R++DV QPLAYCLPG+R RVVVSEG +  L   E+
Sbjct  121  RQLIDILDRCDRTDADDPLY-ARDVRMIDVEQPLAYCLPGLRQRVVVSEGVVHRLTRDEL  179

Query  181  AAILTHERAHLRARHDLVLEAFTAVHAAFPRLVRSANALGAVQLLVELLADDAAVRAAGR  240
             A++ HERAHLRARHDLVLEAF A+H AFPR VRS +ALGA +LLVE LADD AVRA   
Sbjct  180  IAVIAHERAHLRARHDLVLEAFIALHEAFPRFVRSRSALGAAELLVEALADDQAVRATAP  239

Query  241  TPLARALVACASGRAPSGALAVGGPSTVLRVRRLSGRGNSAVLSAAAYLAAAAVLVVPTV  300
            T L RALVACA   AP GA+AVGGP+T+ RV RL     +  ++  AY  AA +LV+PT+
Sbjct  240  TTLGRALVACADAVAPRGAMAVGGPTTLTRVHRLRDDRPAHWIAVGAYATAAVILVLPTL  299

Query  301  ALAVPWLTQLQRLFIA  316
            A+A+PWLT+L RL  A
Sbjct  300  AVAIPWLTELNRLMSA  315


>gi|226306590|ref|YP_002766550.1| hypothetical protein RER_31030 [Rhodococcus erythropolis PR4]
 gi|229493586|ref|ZP_04387371.1| integral membrane protein [Rhodococcus erythropolis SK121]
 gi|226185707|dbj|BAH33811.1| conserved hypothetical membrane protein [Rhodococcus erythropolis 
PR4]
 gi|229319547|gb|EEN85383.1| integral membrane protein [Rhodococcus erythropolis SK121]
Length=317

 Score =  332 bits (852),  Expect = 3e-89, Method: Compositional matrix adjust.
 Identities = 205/315 (66%), Positives = 252/315 (80%), Gaps = 3/315 (0%)

Query  2    SALAFTILAVLLAGPTPALLARATWPLRAPRAAMVLWQAIALAAVLSSFSAGIAIASRLL  61
            +AL F +LA+LLAGP PALL+R+TWP RAPRAA+VLWQA+A+AAVLS+FS+G+AIAS+LL
Sbjct  5    TALVFGLLALLLAGPVPALLSRSTWPYRAPRAALVLWQAVAIAAVLSAFSSGLAIASQLL  64

Query  62   MPGPDGRPTTSFVGAAGRLGWPLWAAYITVFALTVLVGARLAVAVVRVATATRRRRAHHR  121
            +PG DGRPTT+       LG PLW  Y+ VFALT+L+GA+L  ++++VA  TRRRRA HR
Sbjct  65   VPGADGRPTTAPTAEIDALGLPLWILYVVVFALTLLIGAKLIFSIIQVAVRTRRRRARHR  124

Query  122  MVVDLVGVGHNGALAQPCARARDLRVLDVAQPLAYCLPGVRSRVVVSEGTLTALADAEVA  181
            ++VDL+    + A+     R  DLRVLDV +P+AYCLPG+R RVV+S+GTL  L  AEV 
Sbjct  125  VLVDLL---DDCAMPASVERTPDLRVLDVDEPIAYCLPGLRQRVVLSQGTLQNLDHAEVK  181

Query  182  AILTHERAHLRARHDLVLEAFTAVHAAFPRLVRSANALGAVQLLVELLADDAAVRAAGRT  241
            AILTHER+HLRARHDLVLEAFTAV+ AFPR VRS +ALG+VQLLVELLADD+AVRA G T
Sbjct  182  AILTHERSHLRARHDLVLEAFTAVNHAFPRFVRSKSALGSVQLLVELLADDSAVRATGPT  241

Query  242  PLARALVACASGRAPSGALAVGGPSTVLRVRRLSGRGNSAVLSAAAYLAAAAVLVVPTVA  301
            PLARALVACA   AP GA+A GGPST++RV+RLS       ++  AYL A A+LVVPTVA
Sbjct  242  PLARALVACAGSTAPRGAMAAGGPSTLIRVQRLSADDADPRIAVFAYLGAVAILVVPTVA  301

Query  302  LAVPWLTQLQRLFIA  316
            +AVPWLT+L+ LF A
Sbjct  302  VAVPWLTELRLLFNA  316


>gi|296140017|ref|YP_003647260.1| peptidase M48 Ste24p [Tsukamurella paurometabola DSM 20162]
 gi|296028151|gb|ADG78921.1| peptidase M48 Ste24p [Tsukamurella paurometabola DSM 20162]
Length=313

 Score =  322 bits (826),  Expect = 4e-86, Method: Compositional matrix adjust.
 Identities = 187/300 (63%), Positives = 225/300 (75%), Gaps = 3/300 (1%)

Query  15   GPTPALLARATWPLRAPRAAMVLWQAIALAAVLSSFSAGIAIASRLLMPGPDGRPTTSFV  74
            GP P  L++A+WP+RAPRAA+VLWQAIALAAVLS+FSAG+AIASRLL+ GPDGRPTT+ +
Sbjct  15   GPVPLWLSKASWPVRAPRAALVLWQAIALAAVLSAFSAGLAIASRLLVLGPDGRPTTNPI  74

Query  75   GAAGRLGWPLWAAYITVFALTVLVGARLAVAVVRVATATRRRRAHHRMVVDLVGVGHNGA  134
                +LG   W   +  FA T+++GARL  + V++A  TRRRRA HR VVD++    +G 
Sbjct  75   DEIRQLGIVPWTVSVIAFAFTLVIGARLITSTVKLAIRTRRRRARHRTVVDILSQAVDGD  134

Query  135  LAQPCARARDLRVLDVAQPLAYCLPGVRSRVVVSEGTLTALADAEVAAILTHERAHLRAR  194
               P + A DLR+L V +PLAYCLPG+R RVVVSEGTL  L+  E+ A+L HERAHLR+R
Sbjct  135  --HPVSAA-DLRILGVDEPLAYCLPGLRHRVVVSEGTLNQLSHDELTAVLAHERAHLRSR  191

Query  195  HDLVLEAFTAVHAAFPRLVRSANALGAVQLLVELLADDAAVRAAGRTPLARALVACASGR  254
            HDLVLEAFTAVH AFPR VRS+ AL +V+LLVELLADD AV AAG  PLA ALV CA   
Sbjct  192  HDLVLEAFTAVHHAFPRGVRSSAALDSVELLVELLADDKAVAAAGPLPLANALVTCAKSP  251

Query  255  APSGALAVGGPSTVLRVRRLSGRGNSAVLSAAAYLAAAAVLVVPTVALAVPWLTQLQRLF  314
            AP GALAVG   TV+RV RLS     A+ +A  YL A  VLV+PTVA+AVPWLT+L RLF
Sbjct  252  APRGALAVGSTGTVVRVERLSEPAAGALFNAGIYLTAGLVLVIPTVAVAVPWLTELYRLF  311


>gi|254775346|ref|ZP_05216862.1| integral membrane protein [Mycobacterium avium subsp. avium ATCC 
25291]
Length=208

 Score =  313 bits (803),  Expect = 2e-83, Method: Compositional matrix adjust.
 Identities = 179/208 (87%), Positives = 192/208 (93%), Gaps = 0/208 (0%)

Query  1    VSALAFTILAVLLAGPTPALLARATWPLRAPRAAMVLWQAIALAAVLSSFSAGIAIASRL  60
            +SALAFTILAVLL GP PA+LARA WPLRAPRAAMVLWQA+ALAAVLS+FSAGIAIA+R+
Sbjct  1    MSALAFTILAVLLTGPVPAMLARARWPLRAPRAAMVLWQAVALAAVLSAFSAGIAIATRV  60

Query  61   LMPGPDGRPTTSFVGAAGRLGWPLWAAYITVFALTVLVGARLAVAVVRVATATRRRRAHH  120
            L+PGPDGRPTTS +GA GRLGWPLW AYI VFALTVLVGARL V VVRVA A RRRRAHH
Sbjct  61   LVPGPDGRPTTSILGAEGRLGWPLWTAYIGVFALTVLVGARLMVTVVRVAIANRRRRAHH  120

Query  121  RMVVDLVGVGHNGALAQPCARARDLRVLDVAQPLAYCLPGVRSRVVVSEGTLTALADAEV  180
            RMVVDLVG+GH  AL+QPC+R RDLRVLDV QPLAYCLPGVRSRVVVSEGTL+ LADAEV
Sbjct  121  RMVVDLVGMGHGAALSQPCSRTRDLRVLDVPQPLAYCLPGVRSRVVVSEGTLSTLADAEV  180

Query  181  AAILTHERAHLRARHDLVLEAFTAVHAA  208
            +AILTHERAHLRARHDLVLEAFTAVHAA
Sbjct  181  SAILTHERAHLRARHDLVLEAFTAVHAA  208


>gi|296394190|ref|YP_003659074.1| peptidase M48 Ste24p [Segniliparus rotundus DSM 44985]
 gi|296181337|gb|ADG98243.1| peptidase M48 Ste24p [Segniliparus rotundus DSM 44985]
Length=311

 Score =  308 bits (790),  Expect = 6e-82, Method: Compositional matrix adjust.
 Identities = 175/314 (56%), Positives = 222/314 (71%), Gaps = 4/314 (1%)

Query  1    VSALAFTILAVLLAGPTPALLARATWPLRAPRAAMVLWQAIALAAVLSSFSAGIAIASRL  60
            ++A AF +LA++LAGP PA LA + WP RAPRA +VLWQA+A+AAV S+FS G+AIASRL
Sbjct  1    MTAFAFGVLALVLAGPIPAWLAVSRWPQRAPRAGLVLWQAVAIAAVFSAFSCGLAIASRL  60

Query  61   LMPGPDGRPTTSFVGAAGRLGWPLWAAYITVFALTVLVGARLAVAVVRVATATRRRRAHH  120
            L+PGPDGRPT         LGWP+WA  + VFALTVL+G RL  A VR++   R RR+ H
Sbjct  61   LLPGPDGRPTQDVDAQIRALGWPMWAFCVAVFALTVLIGGRLIYAAVRLSVTLRARRSRH  120

Query  121  RMVVDLVGVGHNGALAQPCARARDLRVLDVAQPLAYCLPGVRSRVVVSEGTLTALADAEV  180
            RM+VDL+          P     DLR+L   +  AYCLPG+R R+V+S GT+ +L   E+
Sbjct  121  RMLVDLLTSDRR----IPQHAEEDLRLLAAEERFAYCLPGIRHRLVLSHGTVDSLEPHEL  176

Query  181  AAILTHERAHLRARHDLVLEAFTAVHAAFPRLVRSANALGAVQLLVELLADDAAVRAAGR  240
             A+++HERAHLRARHDL+LEAFTA++ AFPR VRS  AL +V++LVE+LADD A    G 
Sbjct  177  EAVISHERAHLRARHDLLLEAFTAIYQAFPRFVRSGAALTSVRMLVEMLADDHARAVVGA  236

Query  241  TPLARALVACASGRAPSGALAVGGPSTVLRVRRLSGRGNSAVLSAAAYLAAAAVLVVPTV  300
             P+ARALVA A   AP+GA+A GG  T+ RV RL     + ++SA AYLAA  VLV PT+
Sbjct  237  APVARALVALADTAAPAGAIAAGGEFTLARVNRLCSSNRAPLVSATAYLAAFVVLVFPTI  296

Query  301  ALAVPWLTQLQRLF  314
            ALAVPWL +L RL 
Sbjct  297  ALAVPWLEELSRLL  310


>gi|317507034|ref|ZP_07964799.1| integral membrane protein [Segniliparus rugosus ATCC BAA-974]
 gi|316254672|gb|EFV13977.1| integral membrane protein [Segniliparus rugosus ATCC BAA-974]
Length=312

 Score =  305 bits (781),  Expect = 7e-81, Method: Compositional matrix adjust.
 Identities = 182/313 (59%), Positives = 233/313 (75%), Gaps = 4/313 (1%)

Query  2    SALAFTILAVLLAGPTPALLARATWPLRAPRAAMVLWQAIALAAVLSSFSAGIAIASRLL  61
            +A+AF +LA+LLAGP PA L  + WP RAPRAA+VLWQA+A+AAV S+FS G+AIASRLL
Sbjct  3    TAVAFGVLALLLAGPIPAWLGASEWPQRAPRAALVLWQAVAVAAVFSAFSCGLAIASRLL  62

Query  62   MPGPDGRPTTSFVGAAGRLGWPLWAAYITVFALTVLVGARLAVAVVRVATATRRRRAHHR  121
            +PGPDGRPT        RLG P+W   + VFALT+LVGARL+ + VR+A A R RRAHHR
Sbjct  63   LPGPDGRPTQDVHAQLARLGVPMWLFCVAVFALTLLVGARLSYSAVRLAVALRARRAHHR  122

Query  122  MVVDLVGVGHNGALAQPCARARDLRVLDVAQPLAYCLPGVRSRVVVSEGTLTALADAEVA  181
            M+VDL+          P     DLR+L   +  AYCLPG+R R+V+S GT+ +LA +E+ 
Sbjct  123  MLVDLLTSDRR----IPEHAEEDLRLLAAEERFAYCLPGLRHRLVISHGTVDSLAPSELE  178

Query  182  AILTHERAHLRARHDLVLEAFTAVHAAFPRLVRSANALGAVQLLVELLADDAAVRAAGRT  241
            A+++HERAHLRARHDL+LEAFTA++ AFPRLVRS  AL +V++LVE+LADD A  A G  
Sbjct  179  AVISHERAHLRARHDLILEAFTAIYEAFPRLVRSQAALTSVRMLVEMLADDHARSAVGAA  238

Query  242  PLARALVACASGRAPSGALAVGGPSTVLRVRRLSGRGNSAVLSAAAYLAAAAVLVVPTVA  301
            P+ARALVA A   AP+GA+A GG  T+ RV RL     S +++A+AYLAA+ +L+VPT+A
Sbjct  239  PVARALVALADTSAPAGAIAAGGEFTLARVHRLCRSERSPLIAASAYLAASVILIVPTIA  298

Query  302  LAVPWLTQLQRLF  314
            LAVPWLT+L RL 
Sbjct  299  LAVPWLTELSRLL  311


>gi|289574527|ref|ZP_06454754.1| LOW QUALITY PROTEIN: conserved hypothetical transmembrane protein 
[Mycobacterium tuberculosis K85]
 gi|289538958|gb|EFD43536.1| LOW QUALITY PROTEIN: conserved hypothetical transmembrane protein 
[Mycobacterium tuberculosis K85]
Length=258

 Score =  299 bits (766),  Expect = 3e-79, Method: Compositional matrix adjust.
 Identities = 163/163 (100%), Positives = 163/163 (100%), Gaps = 0/163 (0%)

Query  154  LAYCLPGVRSRVVVSEGTLTALADAEVAAILTHERAHLRARHDLVLEAFTAVHAAFPRLV  213
            LAYCLPGVRSRVVVSEGTLTALADAEVAAILTHERAHLRARHDLVLEAFTAVHAAFPRLV
Sbjct  96   LAYCLPGVRSRVVVSEGTLTALADAEVAAILTHERAHLRARHDLVLEAFTAVHAAFPRLV  155

Query  214  RSANALGAVQLLVELLADDAAVRAAGRTPLARALVACASGRAPSGALAVGGPSTVLRVRR  273
            RSANALGAVQLLVELLADDAAVRAAGRTPLARALVACASGRAPSGALAVGGPSTVLRVRR
Sbjct  156  RSANALGAVQLLVELLADDAAVRAAGRTPLARALVACASGRAPSGALAVGGPSTVLRVRR  215

Query  274  LSGRGNSAVLSAAAYLAAAAVLVVPTVALAVPWLTQLQRLFIA  316
            LSGRGNSAVLSAAAYLAAAAVLVVPTVALAVPWLTQLQRLFIA
Sbjct  216  LSGRGNSAVLSAAAYLAAAAVLVVPTVALAVPWLTQLQRLFIA  258


>gi|289757951|ref|ZP_06517329.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
 gi|289713515|gb|EFD77527.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
Length=148

 Score =  201 bits (512),  Expect = 9e-50, Method: Compositional matrix adjust.
 Identities = 131/143 (92%), Positives = 136/143 (96%), Gaps = 3/143 (2%)

Query  1    VSALAFTILAVLLAGPTPALLARATWPLRAPRAAMVLWQAIALAAVLSSFSAGIAIASRL  60
            +SALAFTILAVLLAGPTPALLARATWPLRAPRAAMVLWQAIALAAVLSSFSAGIAIASRL
Sbjct  1    MSALAFTILAVLLAGPTPALLARATWPLRAPRAAMVLWQAIALAAVLSSFSAGIAIASRL  60

Query  61   LMPGPDGRPTTSFVGAAGRLGWPLWAAYITVFALTVLVGARLAVAVVRVATATRRRRAHH  120
            LMPGPDGRPTTSFVGAAGRLGWPLWAAYITVFALTVLVGARLAVAVVRVATATRRRRAHH
Sbjct  61   LMPGPDGRPTTSFVGAAGRLGWPLWAAYITVFALTVLVGARLAVAVVRVATATRRRRAHH  120

Query  121  RMVVDLVGVGHNGALAQPCARAR  143
            RMVVDLVG   +  +A+  +RAR
Sbjct  121  RMVVDLVG---SDTMARLPSRAR  140


>gi|289757950|ref|ZP_06517328.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
 gi|289713514|gb|EFD77526.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
Length=119

 Score =  199 bits (506),  Expect = 5e-49, Method: Compositional matrix adjust.
 Identities = 110/111 (99%), Positives = 111/111 (100%), Gaps = 0/111 (0%)

Query  206  HAAFPRLVRSANALGAVQLLVELLADDAAVRAAGRTPLARALVACASGRAPSGALAVGGP  265
            +AAFPRLVRSANALGAVQLLVELLADDAAVRAAGRTPLARALVACASGRAPSGALAVGGP
Sbjct  9    NAAFPRLVRSANALGAVQLLVELLADDAAVRAAGRTPLARALVACASGRAPSGALAVGGP  68

Query  266  STVLRVRRLSGRGNSAVLSAAAYLAAAAVLVVPTVALAVPWLTQLQRLFIA  316
            STVLRVRRLSGRGNSAVLSAAAYLAAAAVLVVPTVALAVPWLTQLQRLFIA
Sbjct  69   STVLRVRRLSGRGNSAVLSAAAYLAAAAVLVVPTVALAVPWLTQLQRLFIA  119


>gi|336118118|ref|YP_004572886.1| hypothetical protein MLP_24690 [Microlunatus phosphovorus NM-1]
 gi|334685898|dbj|BAK35483.1| hypothetical protein MLP_24690 [Microlunatus phosphovorus NM-1]
Length=295

 Score =  189 bits (481),  Expect = 4e-46, Method: Compositional matrix adjust.
 Identities = 138/296 (47%), Positives = 176/296 (60%), Gaps = 18/296 (6%)

Query  10   AVLLAGPTPALLARATWPLRAPRAAMVLWQAIALAAVLSSFSAGIAIASRLLMPGPDGRP  69
            AV+L GP PA +AR  +  R PRAA+VLWQA A+AA++S F  G+A     L+       
Sbjct  17   AVVLVGPGPAWVARWGFLYRVPRAAVVLWQAGAVAALISIF--GVA----WLLSAATWSQ  70

Query  70   TTSFVGAAGRLGWPLWAAYITVFALTVLVGARLAVAVVRVATATRRRRAHHRMVVDLVGV  129
             +S       + W  WA   TV     LV  RL  A+V V  +T  RR  HR +VDL+  
Sbjct  71   ESS-------VAWWDWAVTGTVVLFAGLVAGRLVWALVGVIASTGARRRRHRDLVDLLAS  123

Query  130  GHNGALAQPCARARDLRVLDVAQPLAYCLPGV-RSRVVVSEGTLTALADAEVAAILTHER  188
              +  +A    R  +LRVL  A+PLAYCLPG+ + RVV+S GTL  L+  E+AA+L HE+
Sbjct  124  KTSADVA---GRLSELRVLAEARPLAYCLPGLWQPRVVLSAGTLAVLSPMEIAAVLAHEK  180

Query  189  AHLRARHDLVLEAFTAVHAAFPRLVRSANALGAVQLLVELLADDAAVRAAGRTPLARALV  248
            +HL ARHDLVL  F AVH AFP  +RS       +LLVE+LADDAAVRA G  PLARALV
Sbjct  181  SHLHARHDLVLATFDAVHQAFPHAIRSDLPAQQARLLVEMLADDAAVRAVGPEPLARALV  240

Query  249  ACASGRAPSGALAVGGPSTVLRVRRLSGRGNSAVLSAAAYLAAAAVLVVPTVALAV  304
            A A    P+ AL     ST LR+ RL+    SA+L+AA Y  A  V+  P +AL +
Sbjct  241  ALAESVVPTEALGAAEGSTCLRIERLT-HPASALLAAAVYGLAVIVVAAPLLALVI  295


>gi|152965610|ref|YP_001361394.1| peptidase M48 Ste24p [Kineococcus radiotolerans SRS30216]
 gi|151360127|gb|ABS03130.1| peptidase M48 Ste24p [Kineococcus radiotolerans SRS30216]
Length=313

 Score =  169 bits (427),  Expect = 8e-40, Method: Compositional matrix adjust.
 Identities = 145/301 (49%), Positives = 178/301 (60%), Gaps = 19/301 (6%)

Query  23   RATWPLRAPRAAMVLWQAIALAAVLSSFSAGIAIASRLLMPGPDGRPTTSFVGAAGRLGW  82
            RA W  + PRAA+VLWQAIAL AVL++  AG+A  S L    P G P   F+   G    
Sbjct  23   RARWTWQVPRAALVLWQAIALGAVLATLGAGLASLSLLFTEEP-GFP---FLERHG----  74

Query  83   PLWAAYITVFALTV-LVGARLAVAVVRVATATRRRRAHHRMVVDLVGVGHNGALAQPCAR  141
            P+    I + +  V +V  R  V    V   TRRRR  HR +VDL+    + +       
Sbjct  75   PVQTTLIGLTSTFVAVVTVRFWVVATLVGIRTRRRRNRHRDMVDLLHRKESTSEVDAALL  134

Query  142  ARD-LRVLDVAQPLAYCLPGVRSRVVVSEGTLTALADAEVAAILTHERAHLRARHDLVLE  200
            A   +RVL     +AYC+PGV SRVVVS+  L +L   EV A+L HERAHLRARHDLVLE
Sbjct  135  AETGVRVLTGPGRVAYCVPGVHSRVVVSDAMLASLTPEEVRAVLAHERAHLRARHDLVLE  194

Query  201  AFTAVHAAFPRLVRSANALGAVQLLVELLADDAAVRAAGRTPLARALVA------CASGR  254
             FTA+HAAFPR+V S  AL +V+LLVE+LADD+A R AG  PLARALVA      C SG 
Sbjct  195  GFTALHAAFPRVVSSQAALDSVRLLVEMLADDSARRRAGSLPLARALVALAGQPDCTSGE  254

Query  255  APSGALAVGGPSTVLRVRRLSGRGNSAVLSAAAYLAAAAVLVVPTVALAVPWLTQLQRLF  314
               GA    G + + RVRRL+ R     LS A Y+AA  VL  PT+A+AVPWL    R  
Sbjct  255  ---GAEMPVGSAALARVRRLAARPARRGLSLATYVAAVLVLGGPTLAVAVPWLQASYRAL  311

Query  315  I  315
            +
Sbjct  312  V  312


>gi|284032683|ref|YP_003382614.1| peptidase M48 Ste24p [Kribbella flavida DSM 17836]
 gi|283811976|gb|ADB33815.1| peptidase M48 Ste24p [Kribbella flavida DSM 17836]
Length=301

 Score =  163 bits (412),  Expect = 4e-38, Method: Compositional matrix adjust.
 Identities = 160/300 (54%), Positives = 187/300 (63%), Gaps = 23/300 (7%)

Query  15   GPTPALLARATWPLRAPRAAMVLWQAIALAAVLSSFSAGIAIA-SRLLMPG-PDGRPTTS  72
            GP PALLAR++WP R PRAA+ LWQA+ALAAVL++  AGIA++ S    PG P   P++ 
Sbjct  16   GPAPALLARSSWPYRIPRAAVALWQALALAAVLAALGAGIALSYSTAGQPGEPRFNPSS-  74

Query  73   FVGAAGRLGWPLWAAYITVFALTVLVGARLAVAVVRVATATRRRRAHHRMVVDLVGVGHN  132
                      P   A   V ALT LV  RL  A  RVA  TR RR  HR +VD+      
Sbjct  75   ----------PRDLAAAAVLALTALVAIRLLYAAGRVAVGTRARRKRHRDLVDV------  118

Query  133  GALAQPCARARDLRVLDVAQPLAYCLPGVR-SRVVVSEGTLTALADAEVAAILTHERAHL  191
              LA P      LRVL    PLAYCLP +R +RVVVS G L  L + E+ A+L HE+AHL
Sbjct  119  --LATPDGLIPGLRVLAEQTPLAYCLPALRGARVVVSVGALDRLDENELRAVLAHEQAHL  176

Query  192  RARHDLVLEAFTAVHAAFPRLVRSANALGAVQLLVELLADDAAVRAAGRTPLARALVACA  251
            RARHDLVLEAFTA+H AFPR VRS  AL   + LVELLADD A R  G  PLARALVA A
Sbjct  177  RARHDLVLEAFTALHRAFPRWVRSEVALEQARTLVELLADDDARRRRGPLPLARALVALA  236

Query  252  SGRAPSGALAVGGPSTVLRVRRLSG-RGNSAVLSAAAYLAAAAVLVVPTVALAVPWLTQL  310
               AP+  LA    STVLRV+RL+       +LSAA Y AAAA+LV+PTV +A P L  L
Sbjct  237  GSPAPAAGLAAAKSSTVLRVQRLAEPEPRHPLLSAATYTAAAALLVLPTVTVAAPVLEAL  296


>gi|84495460|ref|ZP_00994579.1| hypothetical protein JNB_11679 [Janibacter sp. HTCC2649]
 gi|84384953|gb|EAQ00833.1| hypothetical protein JNB_11679 [Janibacter sp. HTCC2649]
Length=305

 Score =  158 bits (399),  Expect = 1e-36, Method: Compositional matrix adjust.
 Identities = 121/281 (44%), Positives = 159/281 (57%), Gaps = 10/281 (3%)

Query  18   PALLARATWPLRAPRAAMVLWQAIALAAVLSSFSAGIAIASRLLMPGPDGRPTTSFVGAA  77
            P  +AR     RAPR A+V WQA++L+AV+++  AG A  + L          +S  G A
Sbjct  18   PRAMARLVSFRRAPRPALVAWQAVSLSAVIAALCAGPAAVAYLNDTTYGWFACSSQNGCA  77

Query  78   GRLGWPL---WAAYITVFALTVLVGARLAVAVVRVATATRRRRAHHRMVVDLVGVGHNGA  134
              + W     W        +TVLV  RL ++  R+ T  R  RA HR +VD++      A
Sbjct  78   TTIWWMENRRWIVLTIAAVVTVLVLGRLLLSGHRIGTRLRAARARHRELVDVL------A  131

Query  135  LAQPCARARDLRVLDVAQPLAYCLPGVRSRVVVSEGTLTALADAEVAAILTHERAHLRAR  194
              +   RA  +RVLD A P AYCLPG RSRVV+++G L AL D E+ A+L HERAHLR R
Sbjct  132  APESDGRADGIRVLDHATPTAYCLPGRRSRVVLTQGALAALPDDELDAVLAHERAHLRGR  191

Query  195  HDLVLEAFTAVHAAFPRLVRSANALGAVQLLVELLADDAAVRAAGRTPLARALVACASGR  254
            HDL++E FT +H + P  VRS  AL  V+LLVE LAD AAVR +G    ARAL+  A G+
Sbjct  192  HDLLIEYFTVLHHSVPNPVRSPEALREVRLLVEALADRAAVRRSGPVTTARALLTLAQGQ  251

Query  255  APSGALAVGGP-STVLRVRRLSGRGNSAVLSAAAYLAAAAV  294
            AP   L  GG  +T  R+R L+    S++     Y  AA V
Sbjct  252  APEAGLGAGGDGTTAARMRLLAAEPLSSLTIVLMYAYAAVV  292


>gi|317123388|ref|YP_004097500.1| peptidase M48 Ste24p [Intrasporangium calvum DSM 43043]
 gi|315587476|gb|ADU46773.1| peptidase M48 Ste24p [Intrasporangium calvum DSM 43043]
Length=298

 Score =  151 bits (381),  Expect = 1e-34, Method: Compositional matrix adjust.
 Identities = 125/313 (40%), Positives = 173/313 (56%), Gaps = 29/313 (9%)

Query  5    AFTILAVLLAGPTPALLARATWPLRAPRAAMVLWQAIALAAVLSSFSAGIAIASRLLMPG  64
            A   L + LA P P L+A  T   RAPRAA+V+WQ+  + AVL++  A  A    ++   
Sbjct  5    ALLTLTIALAWPVPRLMAGMTTFRRAPRAALVVWQSTTMGAVLAALFAAPAALPYVI---  61

Query  65   PDGRPTTSFVGAAGRLGWPLWAAYITVFALTVLVGARLAVAVVRVATATRRRRAHHRMVV  124
                PT +    A ++            A++ L+  RL V+  RV T  R  R  HR +V
Sbjct  62   ---GPTAALADNATQIA--------VAVAVSGLIAGRLIVSGHRVGTRLRAHRRRHRRLV  110

Query  125  DL--VGVGHNGALAQPCARARDLRVLDVAQPLAYCLPGVRSRVVVSEGTLTALADAEVAA  182
            DL  V VG +G+       A  +RV++   P AYC+PG+R RVV+++GTL +L + ++ A
Sbjct  111  DLLAVPVGADGS------HAAHMRVIEHPTPTAYCVPGMRRRVVLTQGTLDSLPEDQLVA  164

Query  183  ILTHERAHLRARHDLVLEAFTAVHAAFPRLVRSANALGAVQLLVELLADDAAVRAAGRTP  242
            +L HERAHLRARHDL+LE FT +H A P   R   A+  V+LL+E+LAD AAVRA G   
Sbjct  165  VLAHERAHLRARHDLILEFFTVIHEAVPSWFRCEMAMHEVKLLIEVLADRAAVRATGVVS  224

Query  243  LARALVACASGR-APSGALAVGGPSTVLRVR-RLSGRGNSAVLSAAA-----YLAAAAVL  295
             ARA+V  A+G   P G LA+G   +  R+R  L   G  A L A       YL A +V+
Sbjct  225  TARAIVGMATGAVKPEGMLAMGESPSAARLRLELLQPGPVAGLPAGVAATVMYLFATSVV  284

Query  296  VVPTVALAVPWLT  308
            ++P   L V W T
Sbjct  285  IMPVALLVVAWAT  297


>gi|256389536|ref|YP_003111100.1| peptidase M48 Ste24p [Catenulispora acidiphila DSM 44928]
 gi|256355762|gb|ACU69259.1| peptidase M48 Ste24p [Catenulispora acidiphila DSM 44928]
Length=314

 Score =  140 bits (353),  Expect = 2e-31, Method: Compositional matrix adjust.
 Identities = 125/321 (39%), Positives = 159/321 (50%), Gaps = 38/321 (11%)

Query  2    SALAFTILAVLLAGPTPALLARATWPLRAPRAAMVLWQAIALAAVLSSFSAGIAIASRLL  61
             A    +LA+LLA P P  LARA WP R  RAA+ LWQA+ +A  L+   A +A+    L
Sbjct  4    DAWPLAVLAILLAWPVPVFLARAAWPRRHARAAIALWQAVGVAGGLALIGAPLAVGVAPL  63

Query  62   MPGPDGRPTTSFVG---AAGRLGWP--LWAAYITVFALTVLVGARLAVAVVRVATATRRR  116
                DG   T  V     A  L  P  L  A     AL  ++  RL    +  A    R 
Sbjct  64   ----DGHLRTGLVELWRDAFHLRVPAALGLAQEIALALAAVLTVRLVGVTLLSAWRIERD  119

Query  117  RAHHRMVVDLVGVGHNGALAQPCARARDLRVLDVAQPLAYCLPGVRSRVVVSEGTLTALA  176
                R  VDL     +          RDLRVL+ A P AYCLPG R R+V++EGT+ ALA
Sbjct  120  LRRQRDAVDLAAEHAD----------RDLRVLEHAAPAAYCLPGTRPRIVITEGTIAALA  169

Query  177  DAEVAAILTHERAHLRARHDLVLEAFTAVHAAFPRLVRSANALGAVQLLVELLADDAAVR  236
              E+ A+L HERAH R RH+LV++ F A  +A P L  +  A  +V  LVE+LADD A R
Sbjct  170  PDELEAVLAHERAHARWRHELVVQPFVAWESALP-LPPARRATASVTALVEMLADDHAAR  228

Query  237  AAGRTPLARALVACASGRAP------SGALAVGGP-------STVLRVRRLSGRGNSAVL  283
            + GR  LARALVA      P       GA   G          T+ RV+RL  R  +  L
Sbjct  229  SVGRPALARALVAIGGTAGPVPNQRTDGAPGSGSDPNPVRATPTLDRVQRLVRRPKATSL  288

Query  284  SA-----AAYLAAAAVLVVPT  299
            +      AA+LAA  ++  PT
Sbjct  289  AERLIGPAAWLAAVLLVAGPT  309


>gi|271966322|ref|YP_003340518.1| hypothetical protein Sros_4975 [Streptosporangium roseum DSM 
43021]
 gi|270509497|gb|ACZ87775.1| hypothetical protein Sros_4975 [Streptosporangium roseum DSM 
43021]
Length=315

 Score =  139 bits (349),  Expect = 7e-31, Method: Compositional matrix adjust.
 Identities = 118/309 (39%), Positives = 160/309 (52%), Gaps = 15/309 (4%)

Query  5    AFTILAVLLAGPTPALLARATWPLRAPRAAMVLWQAIALAAVLSSFSAGIAIASRLLMPG  64
              ++  V+  GP    LA A W  R PRAA+VLWQAI L+  L +   G+  A   L   
Sbjct  9    GISLTPVVFGGPVAGRLAAARWTRRCPRAALVLWQAIGLSGGLGAVGVGLVAAVAPLAAL  68

Query  65   -PDGRPTTSFVGAAGRLGWPLWAAYITVFALTVLVGARLAVAVVRVATATRRRRAHHRMV  123
             P G  T     AAG     L  A++     ++ +   L+V  +R+   T   +   R++
Sbjct  69   FPHGMHTLLQQIAAGHGLSGLGPAHVAALGWSIGLIVWLSVHTIRITVKTVAEQRRQRLL  128

Query  124  VDLVGVGHNGALAQPCARARDLRVLDVAQPLAYCLPGVRSRVVVSEGTLTALADAEVAAI  183
            VD+V   H+           D  VL   + +AYC+PG R+R+V+S+GTL  L   E+ A+
Sbjct  129  VDVVA-DHSSL--------HDAYVLPSGERVAYCVPGRRARIVLSQGTLDLLGPRELQAV  179

Query  184  LTHERAHLRARHDLVLEAFTAVHAAFPRLVRSANALGAVQLLVELLADDAAVRAAGRTPL  243
            L HERAH R RHDLVL  F A+  AFPRL  +  A G V +L+E+LADD A RA G   L
Sbjct  180  LGHERAHARGRHDLVLLPFMALERAFPRLPVARTARGVVPVLLEMLADDQARRAHGELTL  239

Query  244  ARALVACAS---GRAPSGALAVGGPSTVLRVRRLSGRGN--SAVLSAAAYLAAAAVLVVP  298
            ARALV  A+   G A +G LA+   + V RV RL  + +       AAAY  A+ +L  P
Sbjct  240  ARALVRMATPAAGPAEAGTLALADKAVVHRVERLLDQRDRRPGWAPAAAYSTASLLLSGP  299

Query  299  TVALAVPWL  307
               L  P L
Sbjct  300  LAVLVAPLL  308


>gi|336176645|ref|YP_004582020.1| peptidase M48 Ste24p [Frankia symbiont of Datisca glomerata]
 gi|334857625|gb|AEH08099.1| peptidase M48 Ste24p [Frankia symbiont of Datisca glomerata]
Length=396

 Score =  134 bits (336),  Expect = 2e-29, Method: Compositional matrix adjust.
 Identities = 133/323 (42%), Positives = 160/323 (50%), Gaps = 42/323 (13%)

Query  1    VSALAFTILAVLLAGPTPALLARATWPLRAPRAAMVLWQAIALAAVLSSFSAGIAIA-SR  59
             +A    + A +LA P P LLARA WP R PR+A+VLWQAI LA  +S+  A IA   + 
Sbjct  2    TTAAILALFAGVLAWPVPRLLARAHWPSRCPRSAIVLWQAIGLAGGVSALLAVIAFTFAP  61

Query  60   LLMPGPDGRPTTSFVGAAGR----LGWPLWAAYITVFALTVL--VGARLAVAVVRVATAT  113
            L    P G    +   AAG     LGW      I V  L V   + ARL   +      T
Sbjct  62   LSTDLPLGVLDHADHVAAGDPLAGLGW------INVIGLGVASALAARLFGVLALSTAQT  115

Query  114  RRRRAHHRMVVDLVGVGH-----------------NGALAQP-----CA----RARDLRV  147
             R R HHR +VDL G  H                 +G    P     CA    R   LRV
Sbjct  116  LRHRRHHRHLVDLAGQDHGEHDATAASSARPGDAGDGGCQPPDGLPACAGEIHRRGRLRV  175

Query  148  LDVAQPLAYCLPGVR-SRVVVSEGTLTALADAEVAAILTHERAHLRARHDLVLEAFTAVH  206
            LD    +AYCLPGVR +RVVVS G L ALA  E+ ++L HE AH R RHDLV++ F A  
Sbjct  176  LDHPVAVAYCLPGVRHTRVVVSRGLLAALAQDELESVLAHEEAHARGRHDLVIQPFVAWQ  235

Query  207  AAFPRLVRSANALGAVQLLVELLADDAAVRAAGRTPLARALVACASGR--APSGALAVGG  264
              FP L  + +A  AV LLVE+LADDAA R      LARAL      R   P+GA+ + G
Sbjct  236  QTFPFLPPARDATAAVSLLVEMLADDAAARRTSCRTLARALARLGVARFPVPAGAVGITG  295

Query  265  PSTVLRVRRLSGRGNSAVLSAAA  287
             S    +R L   G   VL A A
Sbjct  296  VSHGRAIRSLRTSGYGRVLRARA  318


>gi|86738971|ref|YP_479371.1| peptidase M48, Ste24p [Frankia sp. CcI3]
 gi|86565833|gb|ABD09642.1| peptidase M48, Ste24p [Frankia sp. CcI3]
Length=407

 Score =  133 bits (334),  Expect = 4e-29, Method: Compositional matrix adjust.
 Identities = 118/303 (39%), Positives = 145/303 (48%), Gaps = 49/303 (16%)

Query  6    FTILAVLLAGPTPALLARATWPLRAPRAAMVLWQAIALAAVLSSFSAGIAIASRLLMPGP  65
              + A +LA P P LLA A WP R PRAA+VLWQA+ LA  +S+  A IA     L    
Sbjct  7    LALFAGVLAWPVPRLLAAARWPYRCPRAAIVLWQAVGLAGGVSALLAAIAFTVSPL----  62

Query  66   DGRPTTSFVGAAGRL--GWPLWA-AYITVFALTVL--VGARLAVAVVRVATATRRRRAHH  120
             G   T+ V     +  G PL     I +  L V   + +RL   +   + AT R R  H
Sbjct  63   SGDTPTAIVDHLDNIAAGAPLTGLGLINLIGLAVAAALASRLFGVLGTSSAATLRERHRH  122

Query  121  RMVVDLVGVGH---------------------NGALAQPCARA-------------RD--  144
            R +VDL G  H                     +GA   P   A             RD  
Sbjct  123  RDLVDLAGRRHRRHETCVPPGHASHHSGTAADSGAATDPGTTADGGGATGCCLCEHRDRA  182

Query  145  ---LRVLDVAQPLAYCLPGVR-SRVVVSEGTLTALADAEVAAILTHERAHLRARHDLVLE  200
               LR+LD    +AYC+PGVR +RVVVS G L  L   E+ A+L HE AH+  RHDLV++
Sbjct  183  GILLRILDHPVAVAYCVPGVRHARVVVSRGLLNTLDATELDAVLAHEAAHVAGRHDLVIQ  242

Query  201  AFTAVHAAFPRLVRSANALGAVQLLVELLADDAAVRAAGRTPLARALVACASGRAPSGAL  260
             F A    FP L  +  A  AV LLVE+LADDAA R   R  LARAL      RAP  A 
Sbjct  243  PFVAWERTFPFLDPAREATAAVSLLVEMLADDAAARQTSRRSLARALARLGGARAPVPAG  302

Query  261  AVG  263
            A+G
Sbjct  303  ALG  305



Lambda     K      H
   0.326    0.134    0.394 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 549222890922


  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
    Posted date:  Sep 5, 2011  4:36 AM
  Number of letters in database: 5,219,829,388
  Number of sequences in database:  15,229,318



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40