BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv1849
Length=104
Score E
Sequences producing significant alignments: (Bits) Value
gi|15608986|ref|NP_216365.1| urease subunit beta [Mycobacterium ... 208 3e-52
gi|296164834|ref|ZP_06847392.1| urease beta subunit [Mycobacteri... 162 1e-38
gi|240172032|ref|ZP_04750691.1| urease beta subunit UreB [Mycoba... 162 2e-38
gi|118618421|ref|YP_906753.1| urease beta subunit UreB [Mycobact... 160 6e-38
gi|108799772|ref|YP_639969.1| urease subunit beta [Mycobacterium... 155 2e-36
gi|120404062|ref|YP_953891.1| urease subunit beta [Mycobacterium... 152 2e-35
gi|315444271|ref|YP_004077150.1| urease subunit beta [Mycobacter... 150 7e-35
gi|145223939|ref|YP_001134617.1| urease subunit beta [Mycobacter... 149 1e-34
gi|118469234|ref|YP_887929.1| urease subunit beta [Mycobacterium... 149 2e-34
gi|226365148|ref|YP_002782931.1| urease beta subunit [Rhodococcu... 141 4e-32
gi|169629510|ref|YP_001703159.1| urease subunit beta UreB [Mycob... 139 1e-31
gi|111022644|ref|YP_705616.1| urease beta subunit [Rhodococcus j... 138 3e-31
gi|333919740|ref|YP_004493321.1| Urease subunit beta [Amycolicic... 136 8e-31
gi|343928480|ref|ZP_08767928.1| urease subunit beta [Gordonia al... 134 4e-30
gi|54024494|ref|YP_118736.1| putative urease subunit beta [Nocar... 130 5e-29
gi|262202659|ref|YP_003273867.1| urease subunit beta [Gordonia b... 124 3e-27
gi|317507042|ref|ZP_07964807.1| urease [Segniliparus rugosus ATC... 122 2e-26
gi|241206000|ref|YP_002977096.1| urease subunit beta [Rhizobium ... 120 5e-26
gi|19070374|gb|AAL83827.1|AF347070_4 UreB [Rhizobium leguminosar... 119 1e-25
gi|239986148|ref|ZP_04706812.1| urease subunit beta [Streptomyce... 118 3e-25
gi|291443091|ref|ZP_06582481.1| LOW QUALITY PROTEIN: urease subu... 118 3e-25
gi|209550630|ref|YP_002282547.1| urease subunit beta [Rhizobium ... 117 4e-25
gi|327190911|gb|EGE57965.1| urease protein, beta subunit [Rhizob... 117 4e-25
gi|86358907|ref|YP_470799.1| urease subunit beta [Rhizobium etli... 117 4e-25
gi|284988813|ref|YP_003407367.1| urease subunit beta [Geodermato... 117 5e-25
gi|218513446|ref|ZP_03510286.1| urease subunit beta [Rhizobium e... 117 7e-25
gi|190893133|ref|YP_001979675.1| urease, beta subunit [Rhizobium... 117 7e-25
gi|182440089|ref|YP_001827808.1| urease subunit beta [Streptomyc... 115 2e-24
gi|296394186|ref|YP_003659070.1| urease subunit beta [Segnilipar... 115 3e-24
gi|345002906|ref|YP_004805760.1| urease subunit beta [Streptomyc... 114 3e-24
gi|116253475|ref|YP_769313.1| urease subunit beta [Rhizobium leg... 114 4e-24
gi|323698844|ref|ZP_08110756.1| urease, beta subunit [Desulfovib... 112 2e-23
gi|262374426|ref|ZP_06067701.1| urease, beta subunit [Acinetobac... 112 2e-23
gi|222086809|ref|YP_002545343.1| urease (urea amidohydrolase) be... 112 2e-23
gi|118591403|ref|ZP_01548801.1| urease beta subunit [Stappia agg... 110 5e-23
gi|326384686|ref|ZP_08206364.1| urease subunit beta [Gordonia ne... 110 6e-23
gi|182434030|ref|YP_001821749.1| putative urease beta subunit [S... 110 7e-23
gi|163760964|ref|ZP_02168042.1| Urease, beta subunit [Hoeflea ph... 110 9e-23
gi|337265079|ref|YP_004609134.1| urease subunit beta [Mesorhizob... 110 9e-23
gi|150397586|ref|YP_001328053.1| urease subunit beta [Sinorhizob... 109 1e-22
gi|319780276|ref|YP_004139752.1| urease subunit beta [Mesorhizob... 109 1e-22
gi|90425179|ref|YP_533549.1| urease subunit beta [Rhodopseudomon... 109 1e-22
gi|229488326|ref|ZP_04382192.1| urease subunit beta [Rhodococcus... 109 1e-22
gi|294676768|ref|YP_003577383.1| urease subunit beta [Rhodobacte... 108 2e-22
gi|117924333|ref|YP_864950.1| urease subunit beta [Magnetococcus... 108 2e-22
gi|226308286|ref|YP_002768246.1| urease beta subunit [Rhodococcu... 108 2e-22
gi|289548493|ref|YP_003473481.1| urease subunit beta [Thermocrin... 108 2e-22
gi|237654584|ref|YP_002890898.1| urease subunit beta [Thauera sp... 108 2e-22
gi|328880882|emb|CCA54121.1| Urease beta subunit [Streptomyces v... 108 3e-22
gi|282898098|ref|ZP_06306093.1| Urease, beta subunit [Raphidiops... 108 3e-22
>gi|15608986|ref|NP_216365.1| urease subunit beta [Mycobacterium tuberculosis H37Rv]
gi|15841317|ref|NP_336354.1| urease subunit beta [Mycobacterium tuberculosis CDC1551]
gi|31793039|ref|NP_855532.1| urease subunit beta [Mycobacterium bovis AF2122/97]
87 more sequence titles
Length=104
Score = 208 bits (529), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 104/104 (100%), Positives = 104/104 (100%), Gaps = 0/104 (0%)
Query 1 MIPGEIFYGSGDIEMNAAALSRLQMRIINAGDRPVQVGSHVHLPQANRALSFDRATAHGY 60
MIPGEIFYGSGDIEMNAAALSRLQMRIINAGDRPVQVGSHVHLPQANRALSFDRATAHGY
Sbjct 1 MIPGEIFYGSGDIEMNAAALSRLQMRIINAGDRPVQVGSHVHLPQANRALSFDRATAHGY 60
Query 61 RLDIPAATAVRFEPGIPQIVGLVPLGGRREVPGLTLNPPGRLDR 104
RLDIPAATAVRFEPGIPQIVGLVPLGGRREVPGLTLNPPGRLDR
Sbjct 61 RLDIPAATAVRFEPGIPQIVGLVPLGGRREVPGLTLNPPGRLDR 104
>gi|296164834|ref|ZP_06847392.1| urease beta subunit [Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295899800|gb|EFG79248.1| urease beta subunit [Mycobacterium parascrofulaceum ATCC BAA-614]
Length=103
Score = 162 bits (410), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 81/103 (79%), Positives = 90/103 (88%), Gaps = 1/103 (0%)
Query 1 MIPGEIFYGSGDIEMNAAALSRLQMRIINAGDRPVQVGSHVHLPQANRALSFDRATAHGY 60
MIPGEI YGSGDI++NA A R++M+I+N GDRPVQVGSHVHLPQAN AL+FDRA AHGY
Sbjct 1 MIPGEILYGSGDIDINANA-ERIEMQIMNTGDRPVQVGSHVHLPQANSALAFDRAAAHGY 59
Query 61 RLDIPAATAVRFEPGIPQIVGLVPLGGRREVPGLTLNPPGRLD 103
RLDI AATAVRFEPG+P V LVPL GRREV GLTL+PPGRLD
Sbjct 60 RLDIAAATAVRFEPGVPHTVRLVPLRGRREVHGLTLDPPGRLD 102
>gi|240172032|ref|ZP_04750691.1| urease beta subunit UreB [Mycobacterium kansasii ATCC 12478]
Length=104
Score = 162 bits (409), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 81/103 (79%), Positives = 91/103 (89%), Gaps = 1/103 (0%)
Query 1 MIPGEIFYGSGDIEMNAAALSRLQMRIINAGDRPVQVGSHVHLPQANRALSFDRATAHGY 60
MIPGEI YG+GDI++NA A RL+M++IN GDRPVQVGSHVHLPQAN ALSFDRA AHG+
Sbjct 1 MIPGEILYGTGDIDINAGA-QRLEMQVINTGDRPVQVGSHVHLPQANAALSFDRAAAHGH 59
Query 61 RLDIPAATAVRFEPGIPQIVGLVPLGGRREVPGLTLNPPGRLD 103
RLDIPAATAVRFEPG+ + V LVPL GRREV GLTL+PPGRLD
Sbjct 60 RLDIPAATAVRFEPGVCRTVRLVPLRGRREVHGLTLDPPGRLD 102
>gi|118618421|ref|YP_906753.1| urease beta subunit UreB [Mycobacterium ulcerans Agy99]
gi|183982729|ref|YP_001851020.1| urease beta subunit UreB [Mycobacterium marinum M]
gi|167012826|sp|A0PSG3.1|URE2_MYCUA RecName: Full=Urease subunit beta; AltName: Full=Urea amidohydrolase
subunit beta
gi|254797531|sp|B2HSZ1.1|URE2_MYCMM RecName: Full=Urease subunit beta; AltName: Full=Urea amidohydrolase
subunit beta
gi|118570531|gb|ABL05282.1| urease beta subunit UreB [Mycobacterium ulcerans Agy99]
gi|183176055|gb|ACC41165.1| urease beta subunit UreB [Mycobacterium marinum M]
Length=103
Score = 160 bits (405), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 79/103 (77%), Positives = 85/103 (83%), Gaps = 1/103 (0%)
Query 1 MIPGEIFYGSGDIEMNAAALSRLQMRIINAGDRPVQVGSHVHLPQANRALSFDRATAHGY 60
MIPGEI YG GDIE+N A R++M ++N GDRPVQVGSHVH PQAN ALSFDRA AHGY
Sbjct 1 MIPGEIHYGRGDIEINTTA-QRIEMNVVNTGDRPVQVGSHVHFPQANAALSFDRAAAHGY 59
Query 61 RLDIPAATAVRFEPGIPQIVGLVPLGGRREVPGLTLNPPGRLD 103
RLDIPAATAVRFEPG+ V LVPL GRR V GLTLNPPGRLD
Sbjct 60 RLDIPAATAVRFEPGVAHTVSLVPLEGRRAVYGLTLNPPGRLD 102
>gi|108799772|ref|YP_639969.1| urease subunit beta [Mycobacterium sp. MCS]
gi|119868882|ref|YP_938834.1| urease subunit beta [Mycobacterium sp. KMS]
gi|126435413|ref|YP_001071104.1| urease subunit beta [Mycobacterium sp. JLS]
6 more sequence titles
Length=105
Score = 155 bits (392), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 76/103 (74%), Positives = 86/103 (84%), Gaps = 1/103 (0%)
Query 1 MIPGEIFYGSGDIEMNAAALSRLQMRIINAGDRPVQVGSHVHLPQANRALSFDRATAHGY 60
M+PGEIF+G GD+E+NA A RL+M I+N GDRPVQVGSHVHLPQAN AL FDR A G+
Sbjct 1 MVPGEIFFGEGDVEINAGA-RRLEMEIVNTGDRPVQVGSHVHLPQANAALDFDRTAARGH 59
Query 61 RLDIPAATAVRFEPGIPQIVGLVPLGGRREVPGLTLNPPGRLD 103
RLD+PA TAVRFEPG+ Q V LVPLGG REV GL+LNPPGRLD
Sbjct 60 RLDVPAGTAVRFEPGVAQRVRLVPLGGSREVHGLSLNPPGRLD 102
>gi|120404062|ref|YP_953891.1| urease subunit beta [Mycobacterium vanbaalenii PYR-1]
gi|167012827|sp|A1T9N5.1|URE2_MYCVP RecName: Full=Urease subunit beta; AltName: Full=Urea amidohydrolase
subunit beta
gi|119956880|gb|ABM13885.1| urease, beta subunit [Mycobacterium vanbaalenii PYR-1]
Length=104
Score = 152 bits (384), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 75/103 (73%), Positives = 86/103 (84%), Gaps = 1/103 (0%)
Query 1 MIPGEIFYGSGDIEMNAAALSRLQMRIINAGDRPVQVGSHVHLPQANRALSFDRATAHGY 60
MIPGE +G GDIE+NA A+ RL++ I+N GDRPVQVGSHVH+PQAN AL FDRA AHGY
Sbjct 1 MIPGEFVFGDGDIEINAGAV-RLELPIVNTGDRPVQVGSHVHVPQANGALEFDRAAAHGY 59
Query 61 RLDIPAATAVRFEPGIPQIVGLVPLGGRREVPGLTLNPPGRLD 103
R DIPA TA+RFEPG+ Q V L+PLGG REV GLTL+PPGRLD
Sbjct 60 RFDIPAGTAIRFEPGVAQHVRLIPLGGAREVHGLTLDPPGRLD 102
>gi|315444271|ref|YP_004077150.1| urease subunit beta [Mycobacterium sp. Spyr1]
gi|315262574|gb|ADT99315.1| urease, beta subunit [Mycobacterium sp. Spyr1]
Length=105
Score = 150 bits (379), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 74/103 (72%), Positives = 84/103 (82%), Gaps = 1/103 (0%)
Query 1 MIPGEIFYGSGDIEMNAAALSRLQMRIINAGDRPVQVGSHVHLPQANRALSFDRATAHGY 60
MIPGEI +G GDIE+N A +RL+M I+N GDRPVQVGSHVH+PQAN AL FDRA AHGY
Sbjct 1 MIPGEIVFGDGDIEINPGA-ARLEMEIVNTGDRPVQVGSHVHVPQANSALEFDRAAAHGY 59
Query 61 RLDIPAATAVRFEPGIPQIVGLVPLGGRREVPGLTLNPPGRLD 103
R DI A TA+RFEPG+ Q V LV LGG REV GL+L+PPGRLD
Sbjct 60 RFDIAAGTAIRFEPGVAQQVRLVALGGTREVHGLSLDPPGRLD 102
>gi|145223939|ref|YP_001134617.1| urease subunit beta [Mycobacterium gilvum PYR-GCK]
gi|145216425|gb|ABP45829.1| urease, beta subunit [Mycobacterium gilvum PYR-GCK]
Length=105
Score = 149 bits (376), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 74/103 (72%), Positives = 84/103 (82%), Gaps = 1/103 (0%)
Query 1 MIPGEIFYGSGDIEMNAAALSRLQMRIINAGDRPVQVGSHVHLPQANRALSFDRATAHGY 60
MIPGEI +G GDIE+N A +RL+M I+N GDRPVQVGSHVH+PQAN AL FDRA AHGY
Sbjct 1 MIPGEIVFGDGDIEINPGA-ARLEMEIVNTGDRPVQVGSHVHVPQANSALEFDRAAAHGY 59
Query 61 RLDIPAATAVRFEPGIPQIVGLVPLGGRREVPGLTLNPPGRLD 103
R DI A TA+RFEPG+ Q V LVPL G REV GL+L+PPGRLD
Sbjct 60 RFDIAAGTAIRFEPGVAQQVRLVPLRGTREVHGLSLDPPGRLD 102
>gi|118469234|ref|YP_887929.1| urease subunit beta [Mycobacterium smegmatis str. MC2 155]
gi|118170521|gb|ABK71417.1| urease, beta subunit [Mycobacterium smegmatis str. MC2 155]
Length=109
Score = 149 bits (375), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 74/103 (72%), Positives = 85/103 (83%), Gaps = 1/103 (0%)
Query 1 MIPGEIFYGSGDIEMNAAALSRLQMRIINAGDRPVQVGSHVHLPQANRALSFDRATAHGY 60
++PGEI +G GDIE+NA A RL + ++NAGDRPVQVGSHVHLPQAN AL FDR AHG+
Sbjct 7 VVPGEILHGEGDIEINAGA-PRLTLDVVNAGDRPVQVGSHVHLPQANSALEFDRTAAHGH 65
Query 61 RLDIPAATAVRFEPGIPQIVGLVPLGGRREVPGLTLNPPGRLD 103
RLDIPA TAVRFEPG+ Q V LVPL G REV GL++NPPGRLD
Sbjct 66 RLDIPAGTAVRFEPGVAQRVTLVPLRGTREVYGLSINPPGRLD 108
>gi|226365148|ref|YP_002782931.1| urease beta subunit [Rhodococcus opacus B4]
gi|254797539|sp|C1AXZ1.1|URE2_RHOOB RecName: Full=Urease subunit beta; AltName: Full=Urea amidohydrolase
subunit beta
gi|226243638|dbj|BAH53986.1| urease beta subunit [Rhodococcus opacus B4]
Length=104
Score = 141 bits (355), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 70/103 (68%), Positives = 79/103 (77%), Gaps = 1/103 (0%)
Query 1 MIPGEIFYGSGDIEMNAAALSRLQMRIINAGDRPVQVGSHVHLPQANRALSFDRATAHGY 60
MIPGE+F G IE+N A R ++ ++N GDRPVQVGSHVH PQAN AL FDR+ AHG
Sbjct 1 MIPGEVFCAEGVIELNEGA-PRTELDVVNTGDRPVQVGSHVHFPQANHALQFDRSAAHGL 59
Query 61 RLDIPAATAVRFEPGIPQIVGLVPLGGRREVPGLTLNPPGRLD 103
RLDIPA TAVRFEPGI Q V LVPL G REV GL+L PPG+LD
Sbjct 60 RLDIPAGTAVRFEPGIAQTVVLVPLRGTREVHGLSLTPPGKLD 102
>gi|169629510|ref|YP_001703159.1| urease subunit beta UreB [Mycobacterium abscessus ATCC 19977]
gi|169241477|emb|CAM62505.1| Urease, beta subunit (UreB) [Mycobacterium abscessus]
Length=110
Score = 139 bits (351), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 69/103 (67%), Positives = 82/103 (80%), Gaps = 1/103 (0%)
Query 1 MIPGEIFYGSGDIEMNAAALSRLQMRIINAGDRPVQVGSHVHLPQANRALSFDRATAHGY 60
MIPGE + S DIE+NA A+ +++ ++N GDRPVQVGSHVH PQ+N AL FDRA AHG+
Sbjct 4 MIPGEYLFASDDIELNAGAIV-IELEVVNTGDRPVQVGSHVHFPQSNPALDFDRAAAHGH 62
Query 61 RLDIPAATAVRFEPGIPQIVGLVPLGGRREVPGLTLNPPGRLD 103
RL IPA TAVRFEPG+ Q V LVPL GRREV GLTL+ PG+LD
Sbjct 63 RLHIPAGTAVRFEPGVAQRVELVPLRGRREVHGLTLDAPGQLD 105
>gi|111022644|ref|YP_705616.1| urease beta subunit [Rhodococcus jostii RHA1]
gi|122955282|sp|Q0S4S8.1|URE2_RHOSR RecName: Full=Urease subunit beta; AltName: Full=Urea amidohydrolase
subunit beta
gi|110822174|gb|ABG97458.1| urease beta subunit [Rhodococcus jostii RHA1]
Length=104
Score = 138 bits (347), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 66/103 (65%), Positives = 78/103 (76%), Gaps = 1/103 (0%)
Query 1 MIPGEIFYGSGDIEMNAAALSRLQMRIINAGDRPVQVGSHVHLPQANRALSFDRATAHGY 60
MIPGE+ G IE+N + R ++ ++N GDRPVQVGSHVH PQ+N AL FDR+ AHG
Sbjct 1 MIPGEVVCAEGVIELNEGS-PRTELEVVNTGDRPVQVGSHVHFPQSNHALQFDRSAAHGL 59
Query 61 RLDIPAATAVRFEPGIPQIVGLVPLGGRREVPGLTLNPPGRLD 103
RLDIPA TAVRFEPGI Q + LVPL G REV GL+L PPG+LD
Sbjct 60 RLDIPAGTAVRFEPGIAQTISLVPLRGTREVHGLSLTPPGKLD 102
>gi|333919740|ref|YP_004493321.1| Urease subunit beta [Amycolicicoccus subflavus DQS3-9A1]
gi|333481961|gb|AEF40521.1| Urease subunit beta [Amycolicicoccus subflavus DQS3-9A1]
Length=103
Score = 136 bits (343), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 65/104 (63%), Positives = 77/104 (75%), Gaps = 1/104 (0%)
Query 1 MIPGEIFYGSGDIEMNAAALSRLQMRIINAGDRPVQVGSHVHLPQANRALSFDRATAHGY 60
MIPGE+ G++ +N A R++ ++N GDRPVQVGSH H QAN AL FDR AHG+
Sbjct 1 MIPGEVITAEGELTLNDGA-QRIEAEVVNTGDRPVQVGSHFHFAQANPALEFDREAAHGH 59
Query 61 RLDIPAATAVRFEPGIPQIVGLVPLGGRREVPGLTLNPPGRLDR 104
RLDIPA TA+RFEPGI V LVPLGG REV GL+L PPG+LDR
Sbjct 60 RLDIPAGTAIRFEPGIAHTVSLVPLGGTREVHGLSLTPPGKLDR 103
>gi|343928480|ref|ZP_08767928.1| urease subunit beta [Gordonia alkanivorans NBRC 16433]
gi|343761665|dbj|GAA14854.1| urease subunit beta [Gordonia alkanivorans NBRC 16433]
Length=129
Score = 134 bits (337), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 64/102 (63%), Positives = 79/102 (78%), Gaps = 1/102 (0%)
Query 1 MIPGEIFYGSGDIEMNAAALSRLQMRIINAGDRPVQVGSHVHLPQANRALSFDRATAHGY 60
++PGE+ G IE+NA A +++ ++N+GDRPVQVGSHVH PQ+N AL FDRA AHG
Sbjct 13 LVPGEVIPAEGTIELNAGA-DVVELSVVNSGDRPVQVGSHVHFPQSNAALDFDRALAHGR 71
Query 61 RLDIPAATAVRFEPGIPQIVGLVPLGGRREVPGLTLNPPGRL 102
RLDIPA TAVRFEPGI VGLVPLGG REV G++++PPG
Sbjct 72 RLDIPAGTAVRFEPGIEMTVGLVPLGGTREVYGISMDPPGEC 113
>gi|54024494|ref|YP_118736.1| putative urease subunit beta [Nocardia farcinica IFM 10152]
gi|81680074|sp|Q5YWR9.1|URE2_NOCFA RecName: Full=Urease subunit beta; AltName: Full=Urea amidohydrolase
subunit beta
gi|54016002|dbj|BAD57372.1| putative urease beta subunit [Nocardia farcinica IFM 10152]
Length=108
Score = 130 bits (328), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 67/103 (66%), Positives = 75/103 (73%), Gaps = 1/103 (0%)
Query 1 MIPGEIFYGSGDIEMNAAALSRLQMRIINAGDRPVQVGSHVHLPQANRALSFDRATAHGY 60
MIPGE G IE+N R+ + ++N GDRPVQVGSHVH PQAN AL FDRA AHG
Sbjct 1 MIPGEYLCADGVIEINPGR-ERIALDVVNTGDRPVQVGSHVHFPQANAALDFDRAAAHGC 59
Query 61 RLDIPAATAVRFEPGIPQIVGLVPLGGRREVPGLTLNPPGRLD 103
RLDIPA TAVRFEPG+ Q V LVPL G REV G+ NPPG+LD
Sbjct 60 RLDIPAGTAVRFEPGLAQRVSLVPLAGTREVYGIGPNPPGKLD 102
>gi|262202659|ref|YP_003273867.1| urease subunit beta [Gordonia bronchialis DSM 43247]
gi|262086006|gb|ACY21974.1| urease, beta subunit [Gordonia bronchialis DSM 43247]
Length=124
Score = 124 bits (312), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 65/102 (64%), Positives = 75/102 (74%), Gaps = 1/102 (0%)
Query 1 MIPGEIFYGSGDIEMNAAALSRLQMRIINAGDRPVQVGSHVHLPQANRALSFDRATAHGY 60
+IPGE+ G IE+NA A R+ M +IN GDRPVQVGSHVH PQAN AL FDR A G
Sbjct 16 IIPGEVIPAPGTIELNAGA-DRVTMPVINTGDRPVQVGSHVHFPQANAALDFDRDQALGR 74
Query 61 RLDIPAATAVRFEPGIPQIVGLVPLGGRREVPGLTLNPPGRL 102
RLDI A TAVRFEPG+ V LVPLGG REV G++L+ PG+L
Sbjct 75 RLDIAAGTAVRFEPGVAMTVTLVPLGGSREVHGISLDAPGKL 116
>gi|317507042|ref|ZP_07964807.1| urease [Segniliparus rugosus ATCC BAA-974]
gi|316254680|gb|EFV13985.1| urease [Segniliparus rugosus ATCC BAA-974]
Length=119
Score = 122 bits (305), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 66/106 (63%), Positives = 76/106 (72%), Gaps = 5/106 (4%)
Query 1 MIPGEIF----YGSGDIEMNAAALSRLQMRIINAGDRPVQVGSHVHLPQANRALSFDRAT 56
MIPGEI Y G IE+N S + + ++NAGDRPVQVGSHVH QAN AL FDR
Sbjct 1 MIPGEILGAFGYAPGYIELNEGKPS-IPLEVLNAGDRPVQVGSHVHFAQANTALRFDREH 59
Query 57 AHGYRLDIPAATAVRFEPGIPQIVGLVPLGGRREVPGLTLNPPGRL 102
AHG RLDIPA TAVRFEPG+ + V L P+GG R VPGL+L+PPG L
Sbjct 60 AHGLRLDIPAGTAVRFEPGVAKRVFLTPVGGARFVPGLSLDPPGAL 105
>gi|241206000|ref|YP_002977096.1| urease subunit beta [Rhizobium leguminosarum bv. trifolii WSM1325]
gi|240859890|gb|ACS57557.1| urease, beta subunit [Rhizobium leguminosarum bv. trifolii WSM1325]
Length=101
Score = 120 bits (302), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 60/94 (64%), Positives = 69/94 (74%), Gaps = 1/94 (1%)
Query 1 MIPGEIFYGSGDIEMNAAALSRLQMRIINAGDRPVQVGSHVHLPQANRALSFDRATAHGY 60
MIPGEIF SGDIE+NA A + + + + N GDRPVQVGSH H + N LSFDRA AHG
Sbjct 1 MIPGEIFAASGDIELNAGAPT-VTLEVSNTGDRPVQVGSHYHFAETNAGLSFDRAAAHGK 59
Query 61 RLDIPAATAVRFEPGIPQIVGLVPLGGRREVPGL 94
RLDIPA TAVRFEPG + V L+PL G+REV G
Sbjct 60 RLDIPAGTAVRFEPGQTRSVTLIPLSGKREVYGF 93
>gi|19070374|gb|AAL83827.1|AF347070_4 UreB [Rhizobium leguminosarum bv. viciae]
Length=101
Score = 119 bits (298), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 61/102 (60%), Positives = 71/102 (70%), Gaps = 1/102 (0%)
Query 1 MIPGEIFYGSGDIEMNAAALSRLQMRIINAGDRPVQVGSHVHLPQANRALSFDRATAHGY 60
MIPGEI SGDIE+NA A + + + + N GDRPVQVGSH H + N LSFDRA AHG
Sbjct 1 MIPGEIIAASGDIELNAGAQT-VTLEVSNTGDRPVQVGSHYHFAETNAGLSFDRAAAHGK 59
Query 61 RLDIPAATAVRFEPGIPQIVGLVPLGGRREVPGLTLNPPGRL 102
RLDIPA TAVRFEPG + V L+PL G+REV G G+L
Sbjct 60 RLDIPAGTAVRFEPGQTRSVTLIPLSGKREVYGFRQLVMGKL 101
>gi|239986148|ref|ZP_04706812.1| urease subunit beta [Streptomyces roseosporus NRRL 11379]
Length=103
Score = 118 bits (296), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/104 (64%), Positives = 73/104 (71%), Gaps = 3/104 (2%)
Query 1 MIPGEIFYGSGDIEMNAA-ALSRLQMRIINAGDRPVQVGSHVHLPQANRALSFDRATAHG 59
MIPGEI YG GDI +N A++RL ++NA DRPVQVGSH H +AN L FDRA AHG
Sbjct 1 MIPGEILYGDGDIPVNEGRAVTRLT--VLNAADRPVQVGSHYHFAEANPGLRFDRAAAHG 58
Query 60 YRLDIPAATAVRFEPGIPQIVGLVPLGGRREVPGLTLNPPGRLD 103
RL+I A TAVRFEPGIP V LVPL GRR VPGL G LD
Sbjct 59 LRLNIAAGTAVRFEPGIPADVELVPLAGRRVVPGLRGETGGALD 102
>gi|291443091|ref|ZP_06582481.1| LOW QUALITY PROTEIN: urease subunit gamma/beta [Streptomyces
roseosporus NRRL 15998]
gi|291346038|gb|EFE72942.1| LOW QUALITY PROTEIN: urease subunit gamma/beta [Streptomyces
roseosporus NRRL 15998]
Length=108
Score = 118 bits (295), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/104 (64%), Positives = 73/104 (71%), Gaps = 3/104 (2%)
Query 1 MIPGEIFYGSGDIEMNAA-ALSRLQMRIINAGDRPVQVGSHVHLPQANRALSFDRATAHG 59
MIPGEI YG GDI +N A++RL ++NA DRPVQVGSH H +AN L FDRA AHG
Sbjct 6 MIPGEILYGDGDIPVNEGRAVTRLT--VLNAADRPVQVGSHYHFAEANPGLRFDRAAAHG 63
Query 60 YRLDIPAATAVRFEPGIPQIVGLVPLGGRREVPGLTLNPPGRLD 103
RL+I A TAVRFEPGIP V LVPL GRR VPGL G LD
Sbjct 64 LRLNIAAGTAVRFEPGIPADVELVPLAGRRVVPGLRGETGGALD 107
>gi|209550630|ref|YP_002282547.1| urease subunit beta [Rhizobium leguminosarum bv. trifolii WSM2304]
gi|254797537|sp|B5ZMP3.1|URE2_RHILW RecName: Full=Urease subunit beta; AltName: Full=Urea amidohydrolase
subunit beta
gi|209536386|gb|ACI56321.1| urease, beta subunit [Rhizobium leguminosarum bv. trifolii WSM2304]
Length=101
Score = 117 bits (294), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 59/94 (63%), Positives = 68/94 (73%), Gaps = 1/94 (1%)
Query 1 MIPGEIFYGSGDIEMNAAALSRLQMRIINAGDRPVQVGSHVHLPQANRALSFDRATAHGY 60
MIPGEI SGDIE+NA A + + + + N GDRPVQVGSH H + N LSFDRA AHG
Sbjct 1 MIPGEIIAASGDIELNAGAPT-VTLEVSNTGDRPVQVGSHYHFAETNAGLSFDRAAAHGK 59
Query 61 RLDIPAATAVRFEPGIPQIVGLVPLGGRREVPGL 94
RLDIPA TAVRFEPG + V L+PL G+REV G
Sbjct 60 RLDIPAGTAVRFEPGQTRSVTLIPLSGKREVYGF 93
>gi|327190911|gb|EGE57965.1| urease protein, beta subunit [Rhizobium etli CNPAF512]
Length=101
Score = 117 bits (294), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 61/102 (60%), Positives = 71/102 (70%), Gaps = 1/102 (0%)
Query 1 MIPGEIFYGSGDIEMNAAALSRLQMRIINAGDRPVQVGSHVHLPQANRALSFDRATAHGY 60
MIPGEI SGDIE+NA A + + + + N GDRPVQVGSH H + N LSFDRA AHG
Sbjct 1 MIPGEIIAASGDIELNAGAPT-VTLEVSNTGDRPVQVGSHYHFAETNAGLSFDRAAAHGK 59
Query 61 RLDIPAATAVRFEPGIPQIVGLVPLGGRREVPGLTLNPPGRL 102
RLDIPA TAVRFEPG + V L+PL G+REV G G+L
Sbjct 60 RLDIPAGTAVRFEPGQTRSVTLIPLAGKREVYGFRQLVMGKL 101
>gi|86358907|ref|YP_470799.1| urease subunit beta [Rhizobium etli CFN 42]
gi|108861944|sp|Q2K514.1|URE2_RHIEC RecName: Full=Urease subunit beta; AltName: Full=Urea amidohydrolase
subunit beta
gi|86283009|gb|ABC92072.1| urease (urea amidohydrolase) beta subunit protein [Rhizobium
etli CFN 42]
Length=101
Score = 117 bits (294), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 59/94 (63%), Positives = 68/94 (73%), Gaps = 1/94 (1%)
Query 1 MIPGEIFYGSGDIEMNAAALSRLQMRIINAGDRPVQVGSHVHLPQANRALSFDRATAHGY 60
MIPGEI SGDIE+NA A + + + + N GDRPVQVGSH H + N LSFDRA AHG
Sbjct 1 MIPGEIIAASGDIELNAGAPT-VTLEVSNTGDRPVQVGSHYHFAETNAGLSFDRAAAHGK 59
Query 61 RLDIPAATAVRFEPGIPQIVGLVPLGGRREVPGL 94
RLDIP+ TAVRFEPG + V L+PL GRREV G
Sbjct 60 RLDIPSGTAVRFEPGQTRSVTLIPLSGRREVYGF 93
>gi|284988813|ref|YP_003407367.1| urease subunit beta [Geodermatophilus obscurus DSM 43160]
gi|284062058|gb|ADB72996.1| urease, beta subunit [Geodermatophilus obscurus DSM 43160]
Length=127
Score = 117 bits (294), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 60/95 (64%), Positives = 69/95 (73%), Gaps = 1/95 (1%)
Query 1 MIPGEIFYGSGDIEMNAAALSRLQMRIINAGDRPVQVGSHVHLPQANRALSFDRATAHGY 60
M+PGE+ G +E A R+++ + NAGDRPVQVGSH H PQANRAL FDR AHG+
Sbjct 1 MVPGEVIPAEGVVETLPGA-PRVEVEVTNAGDRPVQVGSHFHFPQANRALEFDRGAAHGH 59
Query 61 RLDIPAATAVRFEPGIPQIVGLVPLGGRREVPGLT 95
RLDI A TAVRFEPGI + V LVPL G R VPGLT
Sbjct 60 RLDIAAGTAVRFEPGITRTVTLVPLAGARVVPGLT 94
>gi|218513446|ref|ZP_03510286.1| urease subunit beta [Rhizobium etli 8C-3]
Length=101
Score = 117 bits (292), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 58/94 (62%), Positives = 68/94 (73%), Gaps = 1/94 (1%)
Query 1 MIPGEIFYGSGDIEMNAAALSRLQMRIINAGDRPVQVGSHVHLPQANRALSFDRATAHGY 60
MIPGEI SGDIE+NA A + + + + N GDRPVQVGSH H + N LSFDRA AHG
Sbjct 1 MIPGEIIAASGDIELNAGAPT-VTLEVSNTGDRPVQVGSHYHFAETNAGLSFDRAAAHGK 59
Query 61 RLDIPAATAVRFEPGIPQIVGLVPLGGRREVPGL 94
RLDIP+ TAVRFEPG + V L+PL G+REV G
Sbjct 60 RLDIPSGTAVRFEPGQTRSVTLIPLSGKREVYGF 93
>gi|190893133|ref|YP_001979675.1| urease, beta subunit [Rhizobium etli CIAT 652]
gi|254797536|sp|B3PXB6.1|URE2_RHIE6 RecName: Full=Urease subunit beta; AltName: Full=Urea amidohydrolase
subunit beta
gi|190698412|gb|ACE92497.1| urease protein, beta subunit [Rhizobium etli CIAT 652]
Length=101
Score = 117 bits (292), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 58/94 (62%), Positives = 68/94 (73%), Gaps = 1/94 (1%)
Query 1 MIPGEIFYGSGDIEMNAAALSRLQMRIINAGDRPVQVGSHVHLPQANRALSFDRATAHGY 60
MIPGEI SGDIE+NA A + + + + N GDRPVQVGSH H + N LSFDRA AHG
Sbjct 1 MIPGEIIAASGDIELNAGAPT-VTLEVSNTGDRPVQVGSHYHFAETNAGLSFDRAAAHGK 59
Query 61 RLDIPAATAVRFEPGIPQIVGLVPLGGRREVPGL 94
RLDIP+ TAVRFEPG + V L+PL G+REV G
Sbjct 60 RLDIPSGTAVRFEPGQTRSVTLIPLAGKREVYGF 93
>gi|182440089|ref|YP_001827808.1| urease subunit beta [Streptomyces griseus subsp. griseus NBRC
13350]
gi|326780758|ref|ZP_08240023.1| Urease subunit beta [Streptomyces cf. griseus XylebKG-1]
gi|254797543|sp|B1W5G8.1|URE2_STRGG RecName: Full=Urease subunit beta; AltName: Full=Urea amidohydrolase
subunit beta
gi|178468605|dbj|BAG23125.1| putative urease beta subunit [Streptomyces griseus subsp. griseus
NBRC 13350]
gi|326661091|gb|EGE45937.1| Urease subunit beta [Streptomyces griseus XylebKG-1]
Length=103
Score = 115 bits (288), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/104 (63%), Positives = 73/104 (71%), Gaps = 3/104 (2%)
Query 1 MIPGEIFYGSGDIEMNAA-ALSRLQMRIINAGDRPVQVGSHVHLPQANRALSFDRATAHG 59
MIPGEI +G GDI +NA ++RL ++NA DRPVQVGSH H +AN L FDRA AHG
Sbjct 1 MIPGEILHGDGDIPLNAGRPVTRLT--VLNAADRPVQVGSHYHFAEANPGLRFDRAAAHG 58
Query 60 YRLDIPAATAVRFEPGIPQIVGLVPLGGRREVPGLTLNPPGRLD 103
RL+I A TAVRFEPGIP V LVPL GRR VPGL G LD
Sbjct 59 LRLNIAAGTAVRFEPGIPADVELVPLTGRRVVPGLRGETGGALD 102
>gi|296394186|ref|YP_003659070.1| urease subunit beta [Segniliparus rotundus DSM 44985]
gi|296181333|gb|ADG98239.1| urease, beta subunit [Segniliparus rotundus DSM 44985]
Length=119
Score = 115 bits (287), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 65/106 (62%), Positives = 71/106 (67%), Gaps = 5/106 (4%)
Query 1 MIPGEI----FYGSGDIEMNAAALSRLQMRIINAGDRPVQVGSHVHLPQANRALSFDRAT 56
MIPGEI Y IE+N S + + N GDRPVQVGSHVH QAN AL FDR
Sbjct 1 MIPGEIRGTGGYTPSYIELNEGRPS-IPFDVCNTGDRPVQVGSHVHFSQANAALQFDREL 59
Query 57 AHGYRLDIPAATAVRFEPGIPQIVGLVPLGGRREVPGLTLNPPGRL 102
AHG RLDIPA TAVRFEPG+ + V L PLGG R VPGL+L PPG L
Sbjct 60 AHGLRLDIPAGTAVRFEPGLVKQVFLTPLGGARHVPGLSLAPPGDL 105
>gi|345002906|ref|YP_004805760.1| urease subunit beta [Streptomyces sp. SirexAA-E]
gi|344318532|gb|AEN13220.1| urease, beta subunit [Streptomyces sp. SirexAA-E]
Length=113
Score = 114 bits (286), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 58/94 (62%), Positives = 72/94 (77%), Gaps = 1/94 (1%)
Query 1 MIPGEIFYGSGDIEMNAAALSRLQMRIINAGDRPVQVGSHVHLPQANRALSFDRATAHGY 60
MIPGEI GSG +E+NA R + ++N GDRP+Q+GSH H+P AN ALSFDRA A G+
Sbjct 1 MIPGEIRTGSGILEINAGREIR-SVTMVNDGDRPIQIGSHFHMPDANPALSFDRALAEGF 59
Query 61 RLDIPAATAVRFEPGIPQIVGLVPLGGRREVPGL 94
RLDIP+ T++RFEPG+ V LV LGGRR+VPGL
Sbjct 60 RLDIPSGTSLRFEPGVGADVSLVALGGRRKVPGL 93
>gi|116253475|ref|YP_769313.1| urease subunit beta [Rhizobium leguminosarum bv. viciae 3841]
gi|123384564|sp|Q1MCV6.1|URE2_RHIL3 RecName: Full=Urease subunit beta; AltName: Full=Urea amidohydrolase
subunit beta
gi|115258123|emb|CAK09224.1| putative urease beta subunit [Rhizobium leguminosarum bv. viciae
3841]
Length=101
Score = 114 bits (286), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 58/94 (62%), Positives = 67/94 (72%), Gaps = 1/94 (1%)
Query 1 MIPGEIFYGSGDIEMNAAALSRLQMRIINAGDRPVQVGSHVHLPQANRALSFDRATAHGY 60
MIPGEI SGDIE+NA A + + + + N GDRPVQVGSH H + N LSFDRA A G
Sbjct 1 MIPGEIIAASGDIELNAGAPT-VTLEVSNTGDRPVQVGSHYHFAETNAGLSFDRAVARGK 59
Query 61 RLDIPAATAVRFEPGIPQIVGLVPLGGRREVPGL 94
RLDIPA TAVRFEPG + V L+PL G+REV G
Sbjct 60 RLDIPAGTAVRFEPGQTRSVTLIPLSGKREVYGF 93
>gi|323698844|ref|ZP_08110756.1| urease, beta subunit [Desulfovibrio sp. ND132]
gi|323458776|gb|EGB14641.1| urease, beta subunit [Desulfovibrio desulfuricans ND132]
Length=102
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/103 (55%), Positives = 69/103 (67%), Gaps = 1/103 (0%)
Query 1 MIPGEIFYGSGDIEMNAAALSRLQMRIINAGDRPVQVGSHVHLPQANRALSFDRATAHGY 60
MIPGEI Y G+IE+NA + + + + NAGDRP+QVGSH H + N L FDR A G+
Sbjct 1 MIPGEILYADGEIELNAGRAT-VTLTVANAGDRPIQVGSHYHFFETNEGLVFDRDRARGF 59
Query 61 RLDIPAATAVRFEPGIPQIVGLVPLGGRREVPGLTLNPPGRLD 103
RL+IPA TAVRFEPG + V LV L G+REV G G+LD
Sbjct 60 RLNIPAGTAVRFEPGQTRDVELVALAGKREVYGFNAKVMGKLD 102
>gi|262374426|ref|ZP_06067701.1| urease, beta subunit [Acinetobacter junii SH205]
gi|262310683|gb|EEY91772.1| urease, beta subunit [Acinetobacter junii SH205]
Length=102
Score = 112 bits (279), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/103 (57%), Positives = 69/103 (67%), Gaps = 1/103 (0%)
Query 1 MIPGEIFYGSGDIEMNAAALSRLQMRIINAGDRPVQVGSHVHLPQANRALSFDRATAHGY 60
MIPGEI DIEMN + L+MR+ NAGDRP+QVGSH H +AN AL F+R A GY
Sbjct 1 MIPGEIITPDSDIEMNVGRET-LKMRVANAGDRPIQVGSHFHFAEANDALQFNREQARGY 59
Query 61 RLDIPAATAVRFEPGIPQIVGLVPLGGRREVPGLTLNPPGRLD 103
RL+I A TAVRFEPG + + LV L G+REV G G+LD
Sbjct 60 RLNIAAGTAVRFEPGQSRDIELVALAGKREVYGFAGRVMGKLD 102
>gi|222086809|ref|YP_002545343.1| urease (urea amidohydrolase) beta subunit protein [Agrobacterium
radiobacter K84]
gi|254790726|sp|B9J8M5.1|URE2_AGRRK RecName: Full=Urease subunit beta; AltName: Full=Urea amidohydrolase
subunit beta
gi|221724257|gb|ACM27413.1| urease (urea amidohydrolase) beta subunit protein [Agrobacterium
radiobacter K84]
Length=101
Score = 112 bits (279), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/102 (57%), Positives = 68/102 (67%), Gaps = 1/102 (0%)
Query 1 MIPGEIFYGSGDIEMNAAALSRLQMRIINAGDRPVQVGSHVHLPQANRALSFDRATAHGY 60
MIPGEI SGDIE+N A + + + + N GDRPVQVGSH H + N LSFDR A G
Sbjct 1 MIPGEIIAASGDIELNVGAPT-VTLEVSNTGDRPVQVGSHYHFAETNGGLSFDRDKARGM 59
Query 61 RLDIPAATAVRFEPGIPQIVGLVPLGGRREVPGLTLNPPGRL 102
RLDIPA TAVRFEPG + V L+PL G+REV G G+L
Sbjct 60 RLDIPAGTAVRFEPGQTRSVTLIPLSGKREVYGFRQQVMGKL 101
>gi|118591403|ref|ZP_01548801.1| urease beta subunit [Stappia aggregata IAM 12614]
gi|118436075|gb|EAV42718.1| urease beta subunit [Stappia aggregata IAM 12614]
Length=101
Score = 110 bits (276), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 56/102 (55%), Positives = 65/102 (64%), Gaps = 1/102 (0%)
Query 1 MIPGEIFYGSGDIEMNAAALSRLQMRIINAGDRPVQVGSHVHLPQANRALSFDRATAHGY 60
MIPGE+F G+IE+NA L L + + N GDRP+QVGSH H + N LSFDR G
Sbjct 1 MIPGELFPADGEIELNAG-LETLTLEVANTGDRPIQVGSHYHFFETNEGLSFDRGKTRGM 59
Query 61 RLDIPAATAVRFEPGIPQIVGLVPLGGRREVPGLTLNPPGRL 102
RLDIPA TAVRFEPG ++V LVP GG R V G G L
Sbjct 60 RLDIPAGTAVRFEPGQSRLVTLVPYGGNRTVYGFNQKVMGEL 101
>gi|326384686|ref|ZP_08206364.1| urease subunit beta [Gordonia neofelifaecis NRRL B-59395]
gi|326196653|gb|EGD53849.1| urease subunit beta [Gordonia neofelifaecis NRRL B-59395]
Length=106
Score = 110 bits (275), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 57/103 (56%), Positives = 69/103 (67%), Gaps = 1/103 (0%)
Query 1 MIPGEIFYGSGDIEMNAAALSRLQMRIINAGDRPVQVGSHVHLPQANRALSFDRATAHGY 60
MIPGE+ ++ N + + +R++N GDRPVQVGSH H P AN AL FDR AHGY
Sbjct 1 MIPGELVLDDRPVDCNTGRPT-IALRVVNTGDRPVQVGSHFHFPAANSALEFDRPAAHGY 59
Query 61 RLDIPAATAVRFEPGIPQIVGLVPLGGRREVPGLTLNPPGRLD 103
RLDIPA TAVRFEPG + V LV +GGRR V GL + G L+
Sbjct 60 RLDIPAGTAVRFEPGDAKTVNLVAIGGRRRVFGLDNSVNGSLE 102
>gi|182434030|ref|YP_001821749.1| putative urease beta subunit [Streptomyces griseus subsp. griseus
NBRC 13350]
gi|326774557|ref|ZP_08233822.1| urease, beta subunit [Streptomyces cf. griseus XylebKG-1]
gi|178462546|dbj|BAG17066.1| putative urease beta subunit [Streptomyces griseus subsp. griseus
NBRC 13350]
gi|326654890|gb|EGE39736.1| urease, beta subunit [Streptomyces griseus XylebKG-1]
Length=112
Score = 110 bits (275), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 59/103 (58%), Positives = 74/103 (72%), Gaps = 3/103 (2%)
Query 1 MIPGEIFYGSGDIEMNAAALSRLQMRIINAGDRPVQVGSHVHLPQANRALSFDRATAHGY 60
MIPGEI GSG + +NA + + L + ++N GDRP+QVGSH+H AN ALSFDRA A G+
Sbjct 1 MIPGEIRTGSGVLHINAESAA-LPLTVVNDGDRPIQVGSHLHFSDANPALSFDRAAARGF 59
Query 61 RLDIPAATAVRFEPGIPQIVGLVPLGGRREVPGLTLNPPGRLD 103
RLDIP+ T++RFEPG+ V LV L GRR VPG+ PPG D
Sbjct 60 RLDIPSGTSLRFEPGVGVDVSLVELRGRRRVPGIV--PPGTRD 100
>gi|163760964|ref|ZP_02168042.1| Urease, beta subunit [Hoeflea phototrophica DFL-43]
gi|162281745|gb|EDQ32038.1| Urease, beta subunit [Hoeflea phototrophica DFL-43]
Length=101
Score = 110 bits (274), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 58/102 (57%), Positives = 69/102 (68%), Gaps = 1/102 (0%)
Query 1 MIPGEIFYGSGDIEMNAAALSRLQMRIINAGDRPVQVGSHVHLPQANRALSFDRATAHGY 60
MIPGEIF GDIE+N A + + +++ N GDRPVQVGSH H + N +LSFDR A G+
Sbjct 1 MIPGEIFTPEGDIELNTGAET-VTLKVANTGDRPVQVGSHYHFFETNPSLSFDRDRARGF 59
Query 61 RLDIPAATAVRFEPGIPQIVGLVPLGGRREVPGLTLNPPGRL 102
RLDI A TAVRFEPG + V LVPL G REV G G+L
Sbjct 60 RLDIAAGTAVRFEPGQERDVTLVPLSGGREVYGFRQQIMGKL 101
>gi|337265079|ref|YP_004609134.1| urease subunit beta [Mesorhizobium opportunistum WSM2075]
gi|336025389|gb|AEH85040.1| urease, beta subunit [Mesorhizobium opportunistum WSM2075]
Length=101
Score = 110 bits (274), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 56/102 (55%), Positives = 68/102 (67%), Gaps = 1/102 (0%)
Query 1 MIPGEIFYGSGDIEMNAAALSRLQMRIINAGDRPVQVGSHVHLPQANRALSFDRATAHGY 60
MIPGEI GDIE+N L+ + +++ N+GDRPVQVGSH H + N L FDR A G
Sbjct 1 MIPGEIIPAQGDIELNKG-LATVTLKVANSGDRPVQVGSHYHFFETNEGLKFDRERARGM 59
Query 61 RLDIPAATAVRFEPGIPQIVGLVPLGGRREVPGLTLNPPGRL 102
RLDI A TA+RFEPG + V LVPLGG+REV G G+L
Sbjct 60 RLDIAAGTAMRFEPGQERDVTLVPLGGKREVYGFQQKVMGKL 101
>gi|150397586|ref|YP_001328053.1| urease subunit beta [Sinorhizobium medicae WSM419]
gi|167012841|sp|A6UC38.1|URE2_SINMW RecName: Full=Urease subunit beta; AltName: Full=Urea amidohydrolase
subunit beta
gi|150029101|gb|ABR61218.1| urease, beta subunit [Sinorhizobium medicae WSM419]
Length=101
Score = 109 bits (273), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/102 (56%), Positives = 69/102 (68%), Gaps = 1/102 (0%)
Query 1 MIPGEIFYGSGDIEMNAAALSRLQMRIINAGDRPVQVGSHVHLPQANRALSFDRATAHGY 60
MIPGEI +G+IE+NA L + + + N+GDRPVQVGSH H +AN L FDR A G
Sbjct 1 MIPGEIITAAGEIELNAG-LETVTIEVANSGDRPVQVGSHYHFAEANPGLLFDRDAARGK 59
Query 61 RLDIPAATAVRFEPGIPQIVGLVPLGGRREVPGLTLNPPGRL 102
RLDIPA TAVRFEPG + V L+PL G+REV G G+L
Sbjct 60 RLDIPAGTAVRFEPGQTRQVTLIPLSGKREVFGFRQQVMGKL 101
>gi|319780276|ref|YP_004139752.1| urease subunit beta [Mesorhizobium ciceri biovar biserrulae WSM1271]
gi|317166164|gb|ADV09702.1| urease, beta subunit [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length=101
Score = 109 bits (272), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/102 (54%), Positives = 67/102 (66%), Gaps = 1/102 (0%)
Query 1 MIPGEIFYGSGDIEMNAAALSRLQMRIINAGDRPVQVGSHVHLPQANRALSFDRATAHGY 60
MIPGEI GDIE+N L + +++ N+GDRP+QVGSH H + N L FDR A G
Sbjct 1 MIPGEIITVGGDIELNKG-LQTVTLKVANSGDRPIQVGSHYHFFETNEGLKFDRERARGM 59
Query 61 RLDIPAATAVRFEPGIPQIVGLVPLGGRREVPGLTLNPPGRL 102
RLDI A TA+RFEPG + V LVPLGG+REV G G+L
Sbjct 60 RLDIAAGTAMRFEPGQERDVTLVPLGGKREVYGFQQKVMGKL 101
>gi|90425179|ref|YP_533549.1| urease subunit beta [Rhodopseudomonas palustris BisB18]
gi|108861947|sp|Q210F6.1|URE2_RHOPB RecName: Full=Urease subunit beta; AltName: Full=Urea amidohydrolase
subunit beta
gi|90107193|gb|ABD89230.1| urease, beta subunit [Rhodopseudomonas palustris BisB18]
Length=104
Score = 109 bits (272), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/104 (55%), Positives = 69/104 (67%), Gaps = 1/104 (0%)
Query 1 MIPGEIFYGSGDIEMNAAALSRLQMRIINAGDRPVQVGSHVHLPQANRALSFDRATAHGY 60
MIPGE+F G+IE+NA + + + NAGDRP+QVGSH H + N AL FDRA A G
Sbjct 1 MIPGELFIQDGEIELNAERET-ATLSVANAGDRPIQVGSHYHFFETNPALQFDRAKARGM 59
Query 61 RLDIPAATAVRFEPGIPQIVGLVPLGGRREVPGLTLNPPGRLDR 104
RLDI A TAVRFEPG + V LV L G+REV G G+LD+
Sbjct 60 RLDIAAGTAVRFEPGQSREVQLVALAGKREVYGFRGEVMGKLDK 103
>gi|229488326|ref|ZP_04382192.1| urease subunit beta [Rhodococcus erythropolis SK121]
gi|229323830|gb|EEN89585.1| urease subunit beta [Rhodococcus erythropolis SK121]
Length=156
Score = 109 bits (272), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 51/98 (53%), Positives = 70/98 (72%), Gaps = 1/98 (1%)
Query 1 MIPGEIFYGSGDIEMNAAALSRLQMRIINAGDRPVQVGSHVHLPQANRALSFDRATAHGY 60
MIPGE+ + +E A ++ M ++N GDRP+Q+GSH+HLP AN AL+FDR A G+
Sbjct 1 MIPGEVRVSTEPLEFGTDA-EKITMVVVNDGDRPIQIGSHLHLPAANPALTFDREAADGF 59
Query 61 RLDIPAATAVRFEPGIPQIVGLVPLGGRREVPGLTLNP 98
RLDIP+ T+VRFEPG+ + V L+ LGG + VPGL + P
Sbjct 60 RLDIPSGTSVRFEPGVSRTVTLIALGGLKSVPGLQIVP 97
>gi|294676768|ref|YP_003577383.1| urease subunit beta [Rhodobacter capsulatus SB 1003]
gi|12313640|dbj|BAB21066.1| beta subunit of urease [Rhodobacter capsulatus]
gi|294475588|gb|ADE84976.1| urease, beta subunit [Rhodobacter capsulatus SB 1003]
Length=101
Score = 108 bits (271), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/102 (57%), Positives = 65/102 (64%), Gaps = 1/102 (0%)
Query 1 MIPGEIFYGSGDIEMNAAALSRLQMRIINAGDRPVQVGSHVHLPQANRALSFDRATAHGY 60
MIPGEIF GDIE+NA A + + + + N GDRPVQVGSH H + N L FDR A GY
Sbjct 1 MIPGEIFPAEGDIELNAGAAT-ITLMVANTGDRPVQVGSHYHFAETNPGLVFDRTAARGY 59
Query 61 RLDIPAATAVRFEPGIPQIVGLVPLGGRREVPGLTLNPPGRL 102
RLDI A TAVRFEPG + V LVPL G R V G G L
Sbjct 60 RLDIAAGTAVRFEPGQSREVQLVPLSGARRVFGFNAKVMGEL 101
>gi|117924333|ref|YP_864950.1| urease subunit beta [Magnetococcus sp. MC-1]
gi|167012819|sp|A0L6F1.1|URE2_MAGSM RecName: Full=Urease subunit beta; AltName: Full=Urea amidohydrolase
subunit beta
gi|117608089|gb|ABK43544.1| urease, beta subunit [Magnetococcus sp. MC-1]
Length=103
Score = 108 bits (271), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/103 (57%), Positives = 69/103 (67%), Gaps = 1/103 (0%)
Query 1 MIPGEIFYGSGDIEMNAAALSRLQMRIINAGDRPVQVGSHVHLPQANRALSFDRATAHGY 60
MIPGE+F GDI +NA + L + + N GDRP+QVGSH H + N AL FDR A GY
Sbjct 1 MIPGELFPAPGDIILNAGCET-LTLTVANGGDRPIQVGSHYHFAETNPALQFDRQRARGY 59
Query 61 RLDIPAATAVRFEPGIPQIVGLVPLGGRREVPGLTLNPPGRLD 103
RLDIPA TAVRFEPG + V LVP GGRR+V G G+L+
Sbjct 60 RLDIPAGTAVRFEPGQARDVTLVPYGGRRQVVGFNGLVNGQLE 102
>gi|226308286|ref|YP_002768246.1| urease beta subunit [Rhodococcus erythropolis PR4]
gi|226187403|dbj|BAH35507.1| urease beta subunit [Rhodococcus erythropolis PR4]
Length=156
Score = 108 bits (271), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 51/98 (53%), Positives = 70/98 (72%), Gaps = 1/98 (1%)
Query 1 MIPGEIFYGSGDIEMNAAALSRLQMRIINAGDRPVQVGSHVHLPQANRALSFDRATAHGY 60
MIPGE+ + +E A ++ M ++N GDRP+Q+GSH+HLP AN AL+FDR A G+
Sbjct 1 MIPGEVRVSTEPLEFGTDA-EKITMVVVNDGDRPIQIGSHLHLPAANPALTFDREAADGF 59
Query 61 RLDIPAATAVRFEPGIPQIVGLVPLGGRREVPGLTLNP 98
RLDIP+ T+VRFEPG+ + V L+ LGG + VPGL + P
Sbjct 60 RLDIPSGTSVRFEPGVSRTVTLIALGGLKRVPGLQIVP 97
>gi|289548493|ref|YP_003473481.1| urease subunit beta [Thermocrinis albus DSM 14484]
gi|289182110|gb|ADC89354.1| urease, beta subunit [Thermocrinis albus DSM 14484]
Length=119
Score = 108 bits (270), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 52/103 (51%), Positives = 69/103 (67%), Gaps = 1/103 (0%)
Query 1 MIPGEIFYGSGDIEMNAAALSRLQMRIINAGDRPVQVGSHVHLPQANRALSFDRATAHGY 60
M+PGEIF G+I +NA + +++ + N GDRP+QVGSH H + N+ L FDR A+GY
Sbjct 1 MVPGEIFVDDGEITLNANRKT-IKLLVKNVGDRPIQVGSHAHFFEVNKYLKFDREKAYGY 59
Query 61 RLDIPAATAVRFEPGIPQIVGLVPLGGRREVPGLTLNPPGRLD 103
RL+IPA TAVRFEPG+ + V LV GG+R V G G L+
Sbjct 60 RLNIPAGTAVRFEPGMAKEVELVEFGGKRIVYGFNALVSGFLE 102
>gi|237654584|ref|YP_002890898.1| urease subunit beta [Thauera sp. MZ1T]
gi|237625831|gb|ACR02521.1| urease, beta subunit [Thauera sp. MZ1T]
Length=117
Score = 108 bits (270), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/103 (56%), Positives = 67/103 (66%), Gaps = 1/103 (0%)
Query 1 MIPGEIFYGSGDIEMNAAALSRLQMRIINAGDRPVQVGSHVHLPQANRALSFDRATAHGY 60
MIPGE+F GDIE+ A +R + + N GDRP+QVGSH H + N AL FDRA A G+
Sbjct 1 MIPGELFVADGDIELAAGRATR-TLVVSNTGDRPIQVGSHYHFAETNSALDFDRAAARGF 59
Query 61 RLDIPAATAVRFEPGIPQIVGLVPLGGRREVPGLTLNPPGRLD 103
RL+I A TAVRFEPG + V LV L G REV G GRLD
Sbjct 60 RLNIAAGTAVRFEPGQWRTVELVALDGEREVYGFNGLVMGRLD 102
>gi|328880882|emb|CCA54121.1| Urease beta subunit [Streptomyces venezuelae ATCC 10712]
Length=114
Score = 108 bits (270), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/104 (59%), Positives = 69/104 (67%), Gaps = 3/104 (2%)
Query 1 MIPGEIFYGSGDIEMNAAA-LSRLQMRIINAGDRPVQVGSHVHLPQANRALSFDRATAHG 59
MIPGEI Y G + +N + ++RL ++NA DRPVQVGSH H + N L FDRA AHG
Sbjct 1 MIPGEILYADGPVALNEGSPVTRLT--VLNAADRPVQVGSHYHFAEVNPGLDFDRAAAHG 58
Query 60 YRLDIPAATAVRFEPGIPQIVGLVPLGGRREVPGLTLNPPGRLD 103
RL I A TAVRFEPGIP V LVPL GRR VPGL G LD
Sbjct 59 RRLHIAAGTAVRFEPGIPVEVELVPLAGRRVVPGLRGEVAGPLD 102
>gi|282898098|ref|ZP_06306093.1| Urease, beta subunit [Raphidiopsis brookii D9]
gi|281197242|gb|EFA72143.1| Urease, beta subunit [Raphidiopsis brookii D9]
Length=101
Score = 108 bits (269), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/102 (54%), Positives = 68/102 (67%), Gaps = 1/102 (0%)
Query 1 MIPGEIFYGSGDIEMNAAALSRLQMRIINAGDRPVQVGSHVHLPQANRALSFDRATAHGY 60
MIPGEI GDIE+NA+ S + + + N GDRP+Q+GSH H + N +L FDR A G
Sbjct 1 MIPGEIITLPGDIELNASR-STINLIVANTGDRPIQIGSHFHFYEVNSSLKFDREKARGM 59
Query 61 RLDIPAATAVRFEPGIPQIVGLVPLGGRREVPGLTLNPPGRL 102
RLDIPA TAVRFEPG + + LVPL GRRE+ G G+L
Sbjct 60 RLDIPAGTAVRFEPGDEKEITLVPLVGRREIYGFNGKINGKL 101
Lambda K H
0.322 0.142 0.425
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 127350764394
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40