BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv1856c
Length=225
Score E
Sequences producing significant alignments: (Bits) Value
gi|15608993|ref|NP_216372.1| short chain dehydrogenase [Mycobact... 449 1e-124
gi|31793046|ref|NP_855539.1| short chain dehydrogenase [Mycobact... 447 6e-124
gi|297634416|ref|ZP_06952196.1| short chain dehydrogenase [Mycob... 444 4e-123
gi|240172039|ref|ZP_04750698.1| short chain dehydrogenase [Mycob... 397 6e-109
gi|183982736|ref|YP_001851027.1| oxidoreductase [Mycobacterium m... 394 8e-108
gi|118618414|ref|YP_906746.1| short chain dehydrogenase [Mycobac... 392 3e-107
gi|296164847|ref|ZP_06847405.1| short-chain dehydrogenase/reduct... 384 5e-105
gi|254821983|ref|ZP_05226984.1| short chain dehydrogenase [Mycob... 380 8e-104
gi|41407662|ref|NP_960498.1| short chain dehydrogenase [Mycobact... 379 2e-103
gi|254775340|ref|ZP_05216856.1| short chain dehydrogenase [Mycob... 378 3e-103
gi|342861247|ref|ZP_08717895.1| short chain dehydrogenase [Mycob... 378 3e-103
gi|336457612|gb|EGO36617.1| dehydrogenase of unknown specificity... 374 5e-102
gi|118463407|ref|YP_882050.1| short chain dehydrogenase [Mycobac... 373 9e-102
gi|15828110|ref|NP_302373.1| short chain dehydrogenase [Mycobact... 372 2e-101
gi|333990584|ref|YP_004523198.1| oxidoreductase [Mycobacterium s... 329 2e-88
gi|108799765|ref|YP_639962.1| short chain dehydrogenase [Mycobac... 310 9e-83
gi|118473731|ref|YP_887922.1| short chain dehydrogenase [Mycobac... 308 5e-82
gi|120404055|ref|YP_953884.1| short chain dehydrogenase [Mycobac... 268 4e-70
gi|145223932|ref|YP_001134610.1| short chain dehydrogenase [Myco... 262 2e-68
gi|169629518|ref|YP_001703167.1| short chain dehydrogenase [Myco... 223 2e-56
gi|294816238|ref|ZP_06774881.1| oxidoreductase [Streptomyces cla... 112 3e-23
gi|254391842|ref|ZP_05007036.1| 3-oxoacyl-[acyl-carrier-protein]... 112 3e-23
gi|312197069|ref|YP_004017130.1| short-chain dehydrogenase/reduc... 107 1e-21
gi|256396641|ref|YP_003118205.1| short-chain dehydrogenase/reduc... 107 2e-21
gi|134100225|ref|YP_001105886.1| 3-oxoacyl-[acyl-carrier-protein... 103 2e-20
gi|284031480|ref|YP_003381411.1| short-chain dehydrogenase/reduc... 102 4e-20
gi|291302433|ref|YP_003513711.1| short-chain dehydrogenase/reduc... 99.0 5e-19
gi|226308780|ref|YP_002768740.1| oxidoreductase [Rhodococcus ery... 98.6 7e-19
gi|302545655|ref|ZP_07297997.1| 3-oxoacyl-(acyl-carrier-protein)... 97.4 1e-18
gi|229489268|ref|ZP_04383134.1| 3-oxoacyl-[acyl-carrier-protein]... 95.5 5e-18
gi|332669331|ref|YP_004452339.1| short-chain dehydrogenase/reduc... 86.7 2e-15
gi|271962845|ref|YP_003337041.1| short chain dehydrogenase prote... 85.5 5e-15
gi|222108964|ref|YP_002551230.1| short chain dehydrogenase prote... 82.8 4e-14
gi|326334087|ref|ZP_08200315.1| 3-oxoacyl-acyl carrier protein r... 82.4 5e-14
gi|159036112|ref|YP_001535365.1| short-chain dehydrogenase/reduc... 77.4 1e-12
gi|337765846|emb|CCB74555.1| conserved protein of unknown functi... 76.3 4e-12
gi|302540248|ref|ZP_07292590.1| short-chain dehydrogenase/reduct... 75.5 6e-12
gi|145592940|ref|YP_001157237.1| short-chain dehydrogenase/reduc... 75.1 7e-12
gi|311898812|dbj|BAJ31220.1| putative oxidoreductase [Kitasatosp... 74.7 8e-12
gi|297155572|gb|ADI05284.1| Putative 3-oxacyl-ACP reductase [Str... 74.3 1e-11
gi|316305717|gb|ADU56362.1| 3-oxoacyl-ACP reductase [Streptomyce... 74.3 1e-11
gi|302530269|ref|ZP_07282611.1| 3-oxoacyl-[acyl-carrier-protein]... 73.9 2e-11
gi|238025266|ref|YP_002909498.1| putative 3-oxacyl-ACP reductase... 73.2 2e-11
gi|300783255|ref|YP_003763546.1| 3-oxoacyl-[acyl-carrier-protein... 73.2 3e-11
gi|300790037|ref|YP_003770328.1| 3-oxoacyl-[acyl-carrier-protein... 70.9 1e-10
gi|333372061|ref|ZP_08463997.1| 3-oxoacyl-[acyl-carrier-protein]... 70.5 2e-10
gi|345011260|ref|YP_004813614.1| short-chain dehydrogenase/reduc... 69.7 3e-10
gi|298249729|ref|ZP_06973533.1| short-chain dehydrogenase/reduct... 69.3 4e-10
gi|330470238|ref|YP_004407981.1| short-chain dehydrogenase/reduc... 68.6 6e-10
gi|167583993|ref|ZP_02376381.1| putative 3-oxacyl-ACP reductase ... 67.8 1e-09
>gi|15608993|ref|NP_216372.1| short chain dehydrogenase [Mycobacterium tuberculosis H37Rv]
gi|15841324|ref|NP_336361.1| short chain dehydrogenase [Mycobacterium tuberculosis CDC1551]
gi|148661662|ref|YP_001283185.1| short chain dehydrogenase [Mycobacterium tuberculosis H37Ra]
45 more sequence titles
Length=225
Score = 449 bits (1155), Expect = 1e-124, Method: Compositional matrix adjust.
Identities = 225/225 (100%), Positives = 225/225 (100%), Gaps = 0/225 (0%)
Query 1 MAVEVLVTGGDTDLGRTMAEGFRNDGHKVTLVGARRGDLEVAAKELDVDAVVCDTTDPTS 60
MAVEVLVTGGDTDLGRTMAEGFRNDGHKVTLVGARRGDLEVAAKELDVDAVVCDTTDPTS
Sbjct 1 MAVEVLVTGGDTDLGRTMAEGFRNDGHKVTLVGARRGDLEVAAKELDVDAVVCDTTDPTS 60
Query 61 LTEARGLFPRHLDTIVNVPAPSWDAGDPRAYSVSDTANAWRNALDATVLSVVLTVQSVGD 120
LTEARGLFPRHLDTIVNVPAPSWDAGDPRAYSVSDTANAWRNALDATVLSVVLTVQSVGD
Sbjct 61 LTEARGLFPRHLDTIVNVPAPSWDAGDPRAYSVSDTANAWRNALDATVLSVVLTVQSVGD 120
Query 121 HLRSGGSIVSVVAENPPAGGAESAIKAALSNWIAGQAAVFGTRGITINTVACGRSVQTGY 180
HLRSGGSIVSVVAENPPAGGAESAIKAALSNWIAGQAAVFGTRGITINTVACGRSVQTGY
Sbjct 121 HLRSGGSIVSVVAENPPAGGAESAIKAALSNWIAGQAAVFGTRGITINTVACGRSVQTGY 180
Query 181 EGLSRTPAPVAAEIARLALFLTTPAARHITGQTLHVSHGALAHFG 225
EGLSRTPAPVAAEIARLALFLTTPAARHITGQTLHVSHGALAHFG
Sbjct 181 EGLSRTPAPVAAEIARLALFLTTPAARHITGQTLHVSHGALAHFG 225
>gi|31793046|ref|NP_855539.1| short chain dehydrogenase [Mycobacterium bovis AF2122/97]
gi|121637759|ref|YP_977982.1| short chain dehydrogenase [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|224990243|ref|YP_002644930.1| short chain dehydrogenase [Mycobacterium bovis BCG str. Tokyo
172]
gi|31618637|emb|CAD94590.1| POSSIBLE OXIDOREDUCTASE [Mycobacterium bovis AF2122/97]
gi|121493406|emb|CAL71879.1| Possible oxidoreductase [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|224773356|dbj|BAH26162.1| short chain dehydrogenase [Mycobacterium bovis BCG str. Tokyo
172]
gi|341601786|emb|CCC64460.1| possible oxidoreductase [Mycobacterium bovis BCG str. Moreau
RDJ]
Length=225
Score = 447 bits (1149), Expect = 6e-124, Method: Compositional matrix adjust.
Identities = 224/225 (99%), Positives = 224/225 (99%), Gaps = 0/225 (0%)
Query 1 MAVEVLVTGGDTDLGRTMAEGFRNDGHKVTLVGARRGDLEVAAKELDVDAVVCDTTDPTS 60
MAVEVLVTGGDTDLGRTMAEGFRNDGHKVTLVGARRGDLEVAAKELDVDAVVCDTTDPTS
Sbjct 1 MAVEVLVTGGDTDLGRTMAEGFRNDGHKVTLVGARRGDLEVAAKELDVDAVVCDTTDPTS 60
Query 61 LTEARGLFPRHLDTIVNVPAPSWDAGDPRAYSVSDTANAWRNALDATVLSVVLTVQSVGD 120
LTEARGLFPRHLDTIVNVPAPSWDAGDPRAYSVSDTANAWRNALDATVLSVVLTVQSVGD
Sbjct 61 LTEARGLFPRHLDTIVNVPAPSWDAGDPRAYSVSDTANAWRNALDATVLSVVLTVQSVGD 120
Query 121 HLRSGGSIVSVVAENPPAGGAESAIKAALSNWIAGQAAVFGTRGITINTVACGRSVQTGY 180
HLRSGGSIVSVVAENPPAGGAESAIKAALSNWIAGQAAVFGTRGITINTVACGRSVQTGY
Sbjct 121 HLRSGGSIVSVVAENPPAGGAESAIKAALSNWIAGQAAVFGTRGITINTVACGRSVQTGY 180
Query 181 EGLSRTPAPVAAEIARLALFLTTPAARHITGQTLHVSHGALAHFG 225
EGLS TPAPVAAEIARLALFLTTPAARHITGQTLHVSHGALAHFG
Sbjct 181 EGLSHTPAPVAAEIARLALFLTTPAARHITGQTLHVSHGALAHFG 225
>gi|297634416|ref|ZP_06952196.1| short chain dehydrogenase [Mycobacterium tuberculosis KZN 4207]
gi|308231958|ref|ZP_07414412.2| oxidoreductase [Mycobacterium tuberculosis SUMu001]
gi|308369538|ref|ZP_07418192.2| oxidoreductase [Mycobacterium tuberculosis SUMu002]
25 more sequence titles
Length=223
Score = 444 bits (1142), Expect = 4e-123, Method: Compositional matrix adjust.
Identities = 222/223 (99%), Positives = 223/223 (100%), Gaps = 0/223 (0%)
Query 3 VEVLVTGGDTDLGRTMAEGFRNDGHKVTLVGARRGDLEVAAKELDVDAVVCDTTDPTSLT 62
+EVLVTGGDTDLGRTMAEGFRNDGHKVTLVGARRGDLEVAAKELDVDAVVCDTTDPTSLT
Sbjct 1 MEVLVTGGDTDLGRTMAEGFRNDGHKVTLVGARRGDLEVAAKELDVDAVVCDTTDPTSLT 60
Query 63 EARGLFPRHLDTIVNVPAPSWDAGDPRAYSVSDTANAWRNALDATVLSVVLTVQSVGDHL 122
EARGLFPRHLDTIVNVPAPSWDAGDPRAYSVSDTANAWRNALDATVLSVVLTVQSVGDHL
Sbjct 61 EARGLFPRHLDTIVNVPAPSWDAGDPRAYSVSDTANAWRNALDATVLSVVLTVQSVGDHL 120
Query 123 RSGGSIVSVVAENPPAGGAESAIKAALSNWIAGQAAVFGTRGITINTVACGRSVQTGYEG 182
RSGGSIVSVVAENPPAGGAESAIKAALSNWIAGQAAVFGTRGITINTVACGRSVQTGYEG
Sbjct 121 RSGGSIVSVVAENPPAGGAESAIKAALSNWIAGQAAVFGTRGITINTVACGRSVQTGYEG 180
Query 183 LSRTPAPVAAEIARLALFLTTPAARHITGQTLHVSHGALAHFG 225
LSRTPAPVAAEIARLALFLTTPAARHITGQTLHVSHGALAHFG
Sbjct 181 LSRTPAPVAAEIARLALFLTTPAARHITGQTLHVSHGALAHFG 223
>gi|240172039|ref|ZP_04750698.1| short chain dehydrogenase [Mycobacterium kansasii ATCC 12478]
Length=225
Score = 397 bits (1020), Expect = 6e-109, Method: Compositional matrix adjust.
Identities = 193/224 (87%), Positives = 208/224 (93%), Gaps = 0/224 (0%)
Query 1 MAVEVLVTGGDTDLGRTMAEGFRNDGHKVTLVGARRGDLEVAAKELDVDAVVCDTTDPTS 60
MAVEVLVTGGDTDLGRT+AEGFR+DGHKVTLVGARR +LEV AKEL+VDA+ CDTT+P S
Sbjct 1 MAVEVLVTGGDTDLGRTVAEGFRDDGHKVTLVGARRDELEVVAKELEVDAIACDTTNPAS 60
Query 61 LTEARGLFPRHLDTIVNVPAPSWDAGDPRAYSVSDTANAWRNALDATVLSVVLTVQSVGD 120
L+E R LFP HLDTIVNVPAPSWDAGDPR YS+SDTA AWRNALDATVLS VLTVQ VGD
Sbjct 61 LSEVRSLFPHHLDTIVNVPAPSWDAGDPRTYSLSDTAAAWRNALDATVLSAVLTVQCVGD 120
Query 121 HLRSGGSIVSVVAENPPAGGAESAIKAALSNWIAGQAAVFGTRGITINTVACGRSVQTGY 180
HLRSGGSI+ VVAENPPAG A++A+KAALSNW+AGQA V+GTRGIT+N VACGRSVQ GY
Sbjct 121 HLRSGGSIIGVVAENPPAGSADAAVKAALSNWVAGQAEVYGTRGITVNAVACGRSVQPGY 180
Query 181 EGLSRTPAPVAAEIARLALFLTTPAARHITGQTLHVSHGALAHF 224
EGLSRTPAPVAAEIARLALFLTTPAARHITGQTLHVSHGALAHF
Sbjct 181 EGLSRTPAPVAAEIARLALFLTTPAARHITGQTLHVSHGALAHF 224
>gi|183982736|ref|YP_001851027.1| oxidoreductase [Mycobacterium marinum M]
gi|183176062|gb|ACC41172.1| oxidoreductase [Mycobacterium marinum M]
Length=225
Score = 394 bits (1011), Expect = 8e-108, Method: Compositional matrix adjust.
Identities = 190/224 (85%), Positives = 204/224 (92%), Gaps = 0/224 (0%)
Query 1 MAVEVLVTGGDTDLGRTMAEGFRNDGHKVTLVGARRGDLEVAAKELDVDAVVCDTTDPTS 60
MAVEVLVTGGDTDLGRT+AEGFR+DGHKVTLVGARR DLEV AKELD DA+ CD T+P S
Sbjct 1 MAVEVLVTGGDTDLGRTVAEGFRDDGHKVTLVGARRDDLEVVAKELDADAIACDITNPAS 60
Query 61 LTEARGLFPRHLDTIVNVPAPSWDAGDPRAYSVSDTANAWRNALDATVLSVVLTVQSVGD 120
L E RGLFP HLDTIVNVPAP+WDAGDPR YS++DTA AWRNALD TVLS VLTVQ VGD
Sbjct 61 LAEVRGLFPHHLDTIVNVPAPTWDAGDPRTYSLADTATAWRNALDTTVLSAVLTVQCVGD 120
Query 121 HLRSGGSIVSVVAENPPAGGAESAIKAALSNWIAGQAAVFGTRGITINTVACGRSVQTGY 180
HLRSGGSI+SVVAENPPAG ++AIK ALSNW+AGQA ++GTRGIT+N VACGRSVQ GY
Sbjct 121 HLRSGGSIISVVAENPPAGSVDAAIKGALSNWVAGQAEIYGTRGITVNAVACGRSVQAGY 180
Query 181 EGLSRTPAPVAAEIARLALFLTTPAARHITGQTLHVSHGALAHF 224
EGLSRTPAPVAAEIARLALFLTTPAARHITGQTLHVSHGALAHF
Sbjct 181 EGLSRTPAPVAAEIARLALFLTTPAARHITGQTLHVSHGALAHF 224
>gi|118618414|ref|YP_906746.1| short chain dehydrogenase [Mycobacterium ulcerans Agy99]
gi|118570524|gb|ABL05275.1| oxidoreductase [Mycobacterium ulcerans Agy99]
Length=225
Score = 392 bits (1006), Expect = 3e-107, Method: Compositional matrix adjust.
Identities = 189/224 (85%), Positives = 203/224 (91%), Gaps = 0/224 (0%)
Query 1 MAVEVLVTGGDTDLGRTMAEGFRNDGHKVTLVGARRGDLEVAAKELDVDAVVCDTTDPTS 60
MAVEVLVTGGDTDLGRT+AEGFR+DGHKVTLVGARR DLEV AKELD DA+ CD T+P S
Sbjct 1 MAVEVLVTGGDTDLGRTVAEGFRDDGHKVTLVGARRDDLEVVAKELDADAIACDITNPAS 60
Query 61 LTEARGLFPRHLDTIVNVPAPSWDAGDPRAYSVSDTANAWRNALDATVLSVVLTVQSVGD 120
L E RGLFP HLDTIVNVPAP+WDAGDPR YS++DTA AWRNALD T LS VLTVQ VGD
Sbjct 61 LAEVRGLFPHHLDTIVNVPAPTWDAGDPRTYSLADTATAWRNALDTTALSAVLTVQCVGD 120
Query 121 HLRSGGSIVSVVAENPPAGGAESAIKAALSNWIAGQAAVFGTRGITINTVACGRSVQTGY 180
HLRSGGSI+SVVAENPPAG ++AIK ALSNW+AGQA ++GTRGIT+N VACGRSVQ GY
Sbjct 121 HLRSGGSIISVVAENPPAGSVDAAIKGALSNWVAGQAEIYGTRGITVNAVACGRSVQAGY 180
Query 181 EGLSRTPAPVAAEIARLALFLTTPAARHITGQTLHVSHGALAHF 224
EGLSRTPAPVAAEIARLALFLTTPAARHITGQTLHVSHGALAHF
Sbjct 181 EGLSRTPAPVAAEIARLALFLTTPAARHITGQTLHVSHGALAHF 224
>gi|296164847|ref|ZP_06847405.1| short-chain dehydrogenase/reductase family oxidoreductase [Mycobacterium
parascrofulaceum ATCC BAA-614]
gi|295899813|gb|EFG79261.1| short-chain dehydrogenase/reductase family oxidoreductase [Mycobacterium
parascrofulaceum ATCC BAA-614]
Length=225
Score = 384 bits (986), Expect = 5e-105, Method: Compositional matrix adjust.
Identities = 183/225 (82%), Positives = 207/225 (92%), Gaps = 0/225 (0%)
Query 1 MAVEVLVTGGDTDLGRTMAEGFRNDGHKVTLVGARRGDLEVAAKELDVDAVVCDTTDPTS 60
MAVEVLVTGGDT+LGR +AEGFR+DGHKVTLVGARR +LE+AAKELDVDA+VCDTTDP S
Sbjct 1 MAVEVLVTGGDTELGRAVAEGFRDDGHKVTLVGARRSELEIAAKELDVDAIVCDTTDPAS 60
Query 61 LTEARGLFPRHLDTIVNVPAPSWDAGDPRAYSVSDTANAWRNALDATVLSVVLTVQSVGD 120
LTEARGLFP HLDTIVNVPAPSW+AGDPR YS++DTA AWRN+LDATVLS VLTVQ+VGD
Sbjct 61 LTEARGLFPHHLDTIVNVPAPSWEAGDPRTYSIADTATAWRNSLDATVLSAVLTVQTVGD 120
Query 121 HLRSGGSIVSVVAENPPAGGAESAIKAALSNWIAGQAAVFGTRGITINTVACGRSVQTGY 180
HLRSGGSI+SVV +NPPAG ++AIKA LSNW++GQA++FGTRGIT+N VA GRS Q GY
Sbjct 121 HLRSGGSIISVVPDNPPAGSVDAAIKATLSNWVSGQASIFGTRGITVNAVASGRSAQPGY 180
Query 181 EGLSRTPAPVAAEIARLALFLTTPAARHITGQTLHVSHGALAHFG 225
+GLSRTP VAAE+ARLALFLT+P+ARHITGQTLHVSHGALA FG
Sbjct 181 DGLSRTPPSVAAEVARLALFLTSPSARHITGQTLHVSHGALAQFG 225
>gi|254821983|ref|ZP_05226984.1| short chain dehydrogenase [Mycobacterium intracellulare ATCC
13950]
Length=225
Score = 380 bits (976), Expect = 8e-104, Method: Compositional matrix adjust.
Identities = 182/224 (82%), Positives = 205/224 (92%), Gaps = 0/224 (0%)
Query 1 MAVEVLVTGGDTDLGRTMAEGFRNDGHKVTLVGARRGDLEVAAKELDVDAVVCDTTDPTS 60
MAVEVLVTGGDT+LGR +AEGFR+DGHKVTLVGAR+ DLE+AAKEL+V+A+VCDTTDP S
Sbjct 1 MAVEVLVTGGDTELGRAVAEGFRDDGHKVTLVGARKSDLEIAAKELEVEAIVCDTTDPAS 60
Query 61 LTEARGLFPRHLDTIVNVPAPSWDAGDPRAYSVSDTANAWRNALDATVLSVVLTVQSVGD 120
L EAR LFP HLDTIVNVPAP+W+AGDPR YS++DTANAWR ALDATVLS VLT+Q+VGD
Sbjct 61 LEEARPLFPHHLDTIVNVPAPTWEAGDPRTYSIADTANAWRKALDATVLSAVLTLQTVGD 120
Query 121 HLRSGGSIVSVVAENPPAGGAESAIKAALSNWIAGQAAVFGTRGITINTVACGRSVQTGY 180
HLRSGGSI+SVV ENPPAG A++AIKA L+NW AGQA+VFGTRGIT+N VA GRS Q GY
Sbjct 121 HLRSGGSIISVVPENPPAGSADAAIKATLANWTAGQASVFGTRGITVNAVASGRSAQAGY 180
Query 181 EGLSRTPAPVAAEIARLALFLTTPAARHITGQTLHVSHGALAHF 224
+GL+RTPAPVAAE+ARLALFLTT AARHITGQTLHVSHGALA F
Sbjct 181 DGLTRTPAPVAAEVARLALFLTTSAARHITGQTLHVSHGALAQF 224
>gi|41407662|ref|NP_960498.1| short chain dehydrogenase [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41396015|gb|AAS03881.1| hypothetical protein MAP_1564c [Mycobacterium avium subsp. paratuberculosis
K-10]
Length=225
Score = 379 bits (973), Expect = 2e-103, Method: Compositional matrix adjust.
Identities = 180/224 (81%), Positives = 206/224 (92%), Gaps = 0/224 (0%)
Query 1 MAVEVLVTGGDTDLGRTMAEGFRNDGHKVTLVGARRGDLEVAAKELDVDAVVCDTTDPTS 60
MAVEVLVTGGDT+LGR +AEGFR+DGHKVTLVGAR+ DLE+AAKEL+ +A+VCDTTDP +
Sbjct 1 MAVEVLVTGGDTELGRAVAEGFRDDGHKVTLVGARKSDLEIAAKELEAEAIVCDTTDPAA 60
Query 61 LTEARGLFPRHLDTIVNVPAPSWDAGDPRAYSVSDTANAWRNALDATVLSVVLTVQSVGD 120
L +AR LFP HLDTIV+VPAPSW+AGDPR YS++DTA+AWRNALDATVLS VLTVQ+VGD
Sbjct 61 LEQARPLFPHHLDTIVHVPAPSWEAGDPRTYSIADTASAWRNALDATVLSAVLTVQTVGD 120
Query 121 HLRSGGSIVSVVAENPPAGGAESAIKAALSNWIAGQAAVFGTRGITINTVACGRSVQTGY 180
HLRSGGSI+SVV ENPPAG A++A+KAALSNW GQA+VFGTRGIT+N VA GR Q GY
Sbjct 121 HLRSGGSIISVVPENPPAGSAQAAVKAALSNWTTGQASVFGTRGITVNAVASGRGAQPGY 180
Query 181 EGLSRTPAPVAAEIARLALFLTTPAARHITGQTLHVSHGALAHF 224
+GLSR+PAPVAAE+ARLALFLT+PAARHITGQTLHVSHGALAHF
Sbjct 181 DGLSRSPAPVAAEVARLALFLTSPAARHITGQTLHVSHGALAHF 224
>gi|254775340|ref|ZP_05216856.1| short chain dehydrogenase [Mycobacterium avium subsp. avium ATCC
25291]
Length=225
Score = 378 bits (971), Expect = 3e-103, Method: Compositional matrix adjust.
Identities = 179/224 (80%), Positives = 206/224 (92%), Gaps = 0/224 (0%)
Query 1 MAVEVLVTGGDTDLGRTMAEGFRNDGHKVTLVGARRGDLEVAAKELDVDAVVCDTTDPTS 60
MAVEVLVTGGDT+LGR +AEGFR+DGHKVTLVGAR+ DLE+AAKEL+ +A+VCDTTDP +
Sbjct 1 MAVEVLVTGGDTELGRAVAEGFRDDGHKVTLVGARKSDLEIAAKELEAEAIVCDTTDPAA 60
Query 61 LTEARGLFPRHLDTIVNVPAPSWDAGDPRAYSVSDTANAWRNALDATVLSVVLTVQSVGD 120
L +AR LFP HLDT+V+VPAPSW+AGDPR YS++DTA+AWRNALDATVLS VLTVQ+VGD
Sbjct 61 LEQARPLFPHHLDTVVHVPAPSWEAGDPRTYSIADTASAWRNALDATVLSAVLTVQTVGD 120
Query 121 HLRSGGSIVSVVAENPPAGGAESAIKAALSNWIAGQAAVFGTRGITINTVACGRSVQTGY 180
HLRSGGSI+SVV ENPPAG A++A+KAALSNW GQA+VFGTRGIT+N VA GR Q GY
Sbjct 121 HLRSGGSIISVVPENPPAGSAQAAVKAALSNWTTGQASVFGTRGITVNAVASGRGAQPGY 180
Query 181 EGLSRTPAPVAAEIARLALFLTTPAARHITGQTLHVSHGALAHF 224
+GLSR+PAPVAAE+ARLALFLT+PAARHITGQTLHVSHGALAHF
Sbjct 181 DGLSRSPAPVAAEVARLALFLTSPAARHITGQTLHVSHGALAHF 224
>gi|342861247|ref|ZP_08717895.1| short chain dehydrogenase [Mycobacterium colombiense CECT 3035]
gi|342131147|gb|EGT84428.1| short chain dehydrogenase [Mycobacterium colombiense CECT 3035]
Length=225
Score = 378 bits (971), Expect = 3e-103, Method: Compositional matrix adjust.
Identities = 182/224 (82%), Positives = 204/224 (92%), Gaps = 0/224 (0%)
Query 1 MAVEVLVTGGDTDLGRTMAEGFRNDGHKVTLVGARRGDLEVAAKELDVDAVVCDTTDPTS 60
MAVEVLVTGGDTDLGRT+AE FR+DGHKVTLVGAR+ DLE+AAKEL+V+A+VCDTTDP S
Sbjct 1 MAVEVLVTGGDTDLGRTVAESFRDDGHKVTLVGARKSDLEIAAKELEVEAIVCDTTDPAS 60
Query 61 LTEARGLFPRHLDTIVNVPAPSWDAGDPRAYSVSDTANAWRNALDATVLSVVLTVQSVGD 120
L EAR LFP HLDTIVNVPAP+W+AGDPR YS++DTA+AWRNALDATVLS VLTVQ+VGD
Sbjct 61 LEEARPLFPHHLDTIVNVPAPAWEAGDPRTYSIADTASAWRNALDATVLSAVLTVQAVGD 120
Query 121 HLRSGGSIVSVVAENPPAGGAESAIKAALSNWIAGQAAVFGTRGITINTVACGRSVQTGY 180
HLRSGGSI+S+V ENPPAG A++A+KA LSNW AGQA +FGTRGIT+N VA GRS + GY
Sbjct 121 HLRSGGSIISLVPENPPAGSADAAVKATLSNWTAGQAGIFGTRGITVNVVASGRSAEAGY 180
Query 181 EGLSRTPAPVAAEIARLALFLTTPAARHITGQTLHVSHGALAHF 224
+GLSRTPAPVAAE ARLALFLTT AARHITGQTLHVSHGALA F
Sbjct 181 DGLSRTPAPVAAEAARLALFLTTSAARHITGQTLHVSHGALARF 224
>gi|336457612|gb|EGO36617.1| dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase
like protein [Mycobacterium avium subsp. paratuberculosis
S397]
Length=223
Score = 374 bits (960), Expect = 5e-102, Method: Compositional matrix adjust.
Identities = 177/222 (80%), Positives = 204/222 (92%), Gaps = 0/222 (0%)
Query 3 VEVLVTGGDTDLGRTMAEGFRNDGHKVTLVGARRGDLEVAAKELDVDAVVCDTTDPTSLT 62
+EVLVTGGDT+LGR +AEGFR+DGHKVTLVGAR+ DLE+AAKEL+ +A+VCDTTDP +L
Sbjct 1 MEVLVTGGDTELGRAVAEGFRDDGHKVTLVGARKSDLEIAAKELEAEAIVCDTTDPAALE 60
Query 63 EARGLFPRHLDTIVNVPAPSWDAGDPRAYSVSDTANAWRNALDATVLSVVLTVQSVGDHL 122
+AR LFP HLDTIV+VPAPSW+AGDPR YS++DTA+AWRNALDATVLS VLTVQ+VGDHL
Sbjct 61 QARPLFPHHLDTIVHVPAPSWEAGDPRTYSIADTASAWRNALDATVLSAVLTVQTVGDHL 120
Query 123 RSGGSIVSVVAENPPAGGAESAIKAALSNWIAGQAAVFGTRGITINTVACGRSVQTGYEG 182
RSGGSI+SVV ENPPAG A++A+KAALSNW GQA+VFGTRGIT+N VA GR Q GY+G
Sbjct 121 RSGGSIISVVPENPPAGSAQAAVKAALSNWTTGQASVFGTRGITVNAVASGRGAQPGYDG 180
Query 183 LSRTPAPVAAEIARLALFLTTPAARHITGQTLHVSHGALAHF 224
LSR+PAPVAAE+ARLALFLT+PAARHITGQTLHVSHGALAHF
Sbjct 181 LSRSPAPVAAEVARLALFLTSPAARHITGQTLHVSHGALAHF 222
>gi|118463407|ref|YP_882050.1| short chain dehydrogenase [Mycobacterium avium 104]
gi|118164694|gb|ABK65591.1| short chain dehydrogenase [Mycobacterium avium 104]
Length=223
Score = 373 bits (958), Expect = 9e-102, Method: Compositional matrix adjust.
Identities = 176/222 (80%), Positives = 204/222 (92%), Gaps = 0/222 (0%)
Query 3 VEVLVTGGDTDLGRTMAEGFRNDGHKVTLVGARRGDLEVAAKELDVDAVVCDTTDPTSLT 62
+EVLVTGGDT+LGR +AEGFR+DGHKVTLVGAR+ DLE+AAKEL+ +A+VCDTTDP +L
Sbjct 1 MEVLVTGGDTELGRAVAEGFRDDGHKVTLVGARKSDLEIAAKELEAEAIVCDTTDPAALE 60
Query 63 EARGLFPRHLDTIVNVPAPSWDAGDPRAYSVSDTANAWRNALDATVLSVVLTVQSVGDHL 122
+AR LFP HLDT+V+VPAPSW+AGDPR YS++DTA+AWRNALDATVLS VLTVQ+VGDHL
Sbjct 61 QARPLFPHHLDTVVHVPAPSWEAGDPRTYSIADTASAWRNALDATVLSAVLTVQTVGDHL 120
Query 123 RSGGSIVSVVAENPPAGGAESAIKAALSNWIAGQAAVFGTRGITINTVACGRSVQTGYEG 182
RSGGSI+SVV ENPPAG A++A+KAALSNW GQA+VFGTRGIT+N VA GR Q GY+G
Sbjct 121 RSGGSIISVVPENPPAGSAQAAVKAALSNWTTGQASVFGTRGITVNAVASGRGAQPGYDG 180
Query 183 LSRTPAPVAAEIARLALFLTTPAARHITGQTLHVSHGALAHF 224
LSR+PAPVAAE+ARLALFLT+PAARHITGQTLHVSHGALAHF
Sbjct 181 LSRSPAPVAAEVARLALFLTSPAARHITGQTLHVSHGALAHF 222
>gi|15828110|ref|NP_302373.1| short chain dehydrogenase [Mycobacterium leprae TN]
gi|221230587|ref|YP_002504003.1| short chain dehydrogenase [Mycobacterium leprae Br4923]
gi|2578370|emb|CAA15443.1| oxidoreductase [Mycobacterium leprae]
gi|13093664|emb|CAC31014.1| short-chain dehydrogenase/reductase family [Mycobacterium leprae]
gi|219933694|emb|CAR72156.1| short-chain dehydrogenase/reductase family [Mycobacterium leprae
Br4923]
Length=224
Score = 372 bits (955), Expect = 2e-101, Method: Compositional matrix adjust.
Identities = 180/224 (81%), Positives = 198/224 (89%), Gaps = 0/224 (0%)
Query 1 MAVEVLVTGGDTDLGRTMAEGFRNDGHKVTLVGARRGDLEVAAKELDVDAVVCDTTDPTS 60
MAV+VLVTGG+TDLGRT+AEGFRNDGHKVTLVG RR DLEV AKELDVD +VC+TTDP S
Sbjct 1 MAVDVLVTGGNTDLGRTIAEGFRNDGHKVTLVGPRRADLEVVAKELDVDTIVCNTTDPAS 60
Query 61 LTEARGLFPRHLDTIVNVPAPSWDAGDPRAYSVSDTANAWRNALDATVLSVVLTVQSVGD 120
L EARGLFPRHL+TIVNVP +D GDPR +S+SDTANAW N LDATVLS VLTVQSVGD
Sbjct 61 LDEARGLFPRHLNTIVNVPTLGFDTGDPRTFSLSDTANAWHNELDATVLSAVLTVQSVGD 120
Query 121 HLRSGGSIVSVVAENPPAGGAESAIKAALSNWIAGQAAVFGTRGITINTVACGRSVQTGY 180
HLRSGGSI+ V+AENPPAG ++AIKAALS+W+AGQA VFGTRGIT+N +ACGRSVQ GY
Sbjct 121 HLRSGGSIIGVLAENPPAGSVDAAIKAALSSWVAGQAGVFGTRGITVNAIACGRSVQAGY 180
Query 181 EGLSRTPAPVAAEIARLALFLTTPAARHITGQTLHVSHGALAHF 224
EGLSR P VA EI RLALFLTTPA+RHITGQTLHVSHGAL HF
Sbjct 181 EGLSRMPPHVATEITRLALFLTTPASRHITGQTLHVSHGALTHF 224
>gi|333990584|ref|YP_004523198.1| oxidoreductase [Mycobacterium sp. JDM601]
gi|333486552|gb|AEF35944.1| oxidoreductase [Mycobacterium sp. JDM601]
Length=223
Score = 329 bits (844), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 165/223 (74%), Positives = 185/223 (83%), Gaps = 0/223 (0%)
Query 3 VEVLVTGGDTDLGRTMAEGFRNDGHKVTLVGARRGDLEVAAKELDVDAVVCDTTDPTSLT 62
++VLVTGGDT+LGRT+AEGF GHKVT+ G R +LE+AAKELD +AVVCD TDP SL
Sbjct 1 MDVLVTGGDTELGRTVAEGFSEAGHKVTIAGMRGPELEIAAKELDANAVVCDNTDPASLL 60
Query 63 EARGLFPRHLDTIVNVPAPSWDAGDPRAYSVSDTANAWRNALDATVLSVVLTVQSVGDHL 122
ARGLFP HLDTIVNVPAP W GDPRAYS++D A AWR ALDATVLS VLTV +VGDHL
Sbjct 61 AARGLFPHHLDTIVNVPAPRWLGGDPRAYSLADQAAAWRGALDATVLSAVLTVATVGDHL 120
Query 123 RSGGSIVSVVAENPPAGGAESAIKAALSNWIAGQAAVFGTRGITINTVACGRSVQTGYEG 182
RSGGSIVSV+ ENP GGA++A+KAALSNW AGQA VFGTRGIT+N VA G + GY+G
Sbjct 121 RSGGSIVSVMPENPLDGGADAAVKAALSNWTAGQATVFGTRGITVNVVAAGAGARPGYDG 180
Query 183 LSRTPAPVAAEIARLALFLTTPAARHITGQTLHVSHGALAHFG 225
L+ PA EIARLA+FLTTPAARHITGQTLHVSHGALAHFG
Sbjct 181 LTSAPAGADTEIARLAVFLTTPAARHITGQTLHVSHGALAHFG 223
>gi|108799765|ref|YP_639962.1| short chain dehydrogenase [Mycobacterium sp. MCS]
gi|119868875|ref|YP_938827.1| short chain dehydrogenase [Mycobacterium sp. KMS]
gi|126435406|ref|YP_001071097.1| short chain dehydrogenase [Mycobacterium sp. JLS]
gi|108770184|gb|ABG08906.1| short chain dehydrogenase [Mycobacterium sp. MCS]
gi|119694964|gb|ABL92037.1| short-chain dehydrogenase/reductase SDR [Mycobacterium sp. KMS]
gi|126235206|gb|ABN98606.1| short-chain dehydrogenase/reductase SDR [Mycobacterium sp. JLS]
Length=228
Score = 310 bits (794), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 156/228 (69%), Positives = 182/228 (80%), Gaps = 5/228 (2%)
Query 3 VEVLVTGGDTDLGRTMAEGFRNDGHKVTLVGARRGDLEVAAKELDVDAVVCDTTDPTSLT 62
+EVLVTGGDTDLGRT+AEGFR+DGH+V + GARR DLE+ AKELDVD++V D TDP +
Sbjct 1 MEVLVTGGDTDLGRTIAEGFRDDGHRVVIAGARREDLEINAKELDVDSIVFDNTDPAGVE 60
Query 63 EARGLFPRHLDTIVNVPAPSWDAGDPRAYSVSDTANAWRNALDATVLSVVLTVQSVGDHL 122
EAR LFP HLDT+VNVPAP + DPR +S++D A AWR ALD TVLS VLTVQ VGDHL
Sbjct 61 EARSLFPHHLDTLVNVPAPQYPPADPRTFSLADHALAWRRALDTTVLSAVLTVQIVGDHL 120
Query 123 RSGGSIVSVVAEN-----PPAGGAESAIKAALSNWIAGQAAVFGTRGITINTVACGRSVQ 177
RSGGSIV+V+ EN G ++AIKAALS+W AGQA FGTRGIT+N VA G+S
Sbjct 121 RSGGSIVNVIPENVVIAQAREGSVDAAIKAALSDWTAGQATHFGTRGITVNAVATGKSAG 180
Query 178 TGYEGLSRTPAPVAAEIARLALFLTTPAARHITGQTLHVSHGALAHFG 225
Y+GLS TP VAAEIAR+ALFL+TPAARHITGQT+HVS GALA+FG
Sbjct 181 PSYDGLSSTPPAVAAEIARMALFLSTPAARHITGQTMHVSRGALANFG 228
>gi|118473731|ref|YP_887922.1| short chain dehydrogenase [Mycobacterium smegmatis str. MC2 155]
gi|118175018|gb|ABK75914.1| short chain dehydrogenase [Mycobacterium smegmatis str. MC2 155]
Length=223
Score = 308 bits (788), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 151/219 (69%), Positives = 176/219 (81%), Gaps = 0/219 (0%)
Query 4 EVLVTGGDTDLGRTMAEGFRNDGHKVTLVGARRGDLEVAAKELDVDAVVCDTTDPTSLTE 63
EVLVTGGDT+LGR +A+GFR+ GH V + GARR DLEVAAKELD++++V D TD SL
Sbjct 3 EVLVTGGDTELGRAIAQGFRDAGHNVVIAGARRDDLEVAAKELDIESIVFDNTDAASLEA 62
Query 64 ARGLFPRHLDTIVNVPAPSWDAGDPRAYSVSDTANAWRNALDATVLSVVLTVQSVGDHLR 123
RG FP HLDT+VNVPAP W+A DPR Y+++D A+AWRN LDATV+S LTVQ VGDHLR
Sbjct 63 VRGQFPHHLDTLVNVPAPRWEAKDPRTYTLADLASAWRNNLDATVVSAALTVQIVGDHLR 122
Query 124 SGGSIVSVVAENPPAGGAESAIKAALSNWIAGQAAVFGTRGITINTVACGRSVQTGYEGL 183
SGGSIV+V+ E+ G E+AIKAALS+W AGQA FGTRGITIN VA GRS + Y+GL
Sbjct 123 SGGSIVNVLPESAKEGSVEAAIKAALSDWTAGQADFFGTRGITINAVAAGRSAEQAYDGL 182
Query 184 SRTPAPVAAEIARLALFLTTPAARHITGQTLHVSHGALA 222
+RTP VA E RLALFL+TPAARHITGQTLHVS GALA
Sbjct 183 TRTPPSVADEFTRLALFLSTPAARHITGQTLHVSRGALA 221
>gi|120404055|ref|YP_953884.1| short chain dehydrogenase [Mycobacterium vanbaalenii PYR-1]
gi|119956873|gb|ABM13878.1| short-chain dehydrogenase/reductase SDR [Mycobacterium vanbaalenii
PYR-1]
Length=223
Score = 268 bits (685), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 138/223 (62%), Positives = 172/223 (78%), Gaps = 0/223 (0%)
Query 3 VEVLVTGGDTDLGRTMAEGFRNDGHKVTLVGARRGDLEVAAKELDVDAVVCDTTDPTSLT 62
++VL+TG DTDLGRT+AE F GHKV + G RR +LEV AKELDVDA+V D TDP S+
Sbjct 1 MDVLITGCDTDLGRTIAESFSEAGHKVLVGGRRRDELEVLAKELDVDALVFDNTDPASVA 60
Query 63 EARGLFPRHLDTIVNVPAPSWDAGDPRAYSVSDTANAWRNALDATVLSVVLTVQSVGDHL 122
G P HLDTI+N+PAP+W GDPR Y+++D A WR DA +++ VLTVQ +GDH+
Sbjct 61 ALHGQVPAHLDTIINMPAPTWTVGDPRTYTLADHAAEWRGLFDAGLVASVLTVQVLGDHM 120
Query 123 RSGGSIVSVVAENPPAGGAESAIKAALSNWIAGQAAVFGTRGITINTVACGRSVQTGYEG 182
RSGGSI++V+ + G A +A+KAA+S+W AGQA FG RGIT+N VA GR V+ GY+G
Sbjct 121 RSGGSIINVIPDFVRDGSAAAAVKAAVSDWTAGQADQFGVRGITVNAVAVGRGVEPGYDG 180
Query 183 LSRTPAPVAAEIARLALFLTTPAARHITGQTLHVSHGALAHFG 225
L TP VAAEI+RL+LFLTTPAARHITGQTLHV+HGALA+FG
Sbjct 181 LGSTPPSVAAEISRLSLFLTTPAARHITGQTLHVTHGALANFG 223
>gi|145223932|ref|YP_001134610.1| short chain dehydrogenase [Mycobacterium gilvum PYR-GCK]
gi|315444264|ref|YP_004077143.1| hypothetical protein Mspyr1_26770 [Mycobacterium sp. Spyr1]
gi|145216418|gb|ABP45822.1| short-chain dehydrogenase/reductase SDR [Mycobacterium gilvum
PYR-GCK]
gi|315262567|gb|ADT99308.1| dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase
like protein [Mycobacterium sp. Spyr1]
Length=223
Score = 262 bits (670), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 140/222 (64%), Positives = 170/222 (77%), Gaps = 0/222 (0%)
Query 3 VEVLVTGGDTDLGRTMAEGFRNDGHKVTLVGARRGDLEVAAKELDVDAVVCDTTDPTSLT 62
++VLVTG DTDLGRT+AEGF GH V + G RR +LEV AKELD DA V D TDP S+
Sbjct 1 MDVLVTGCDTDLGRTIAEGFHEAGHTVLVGGRRRDELEVLAKELDTDAYVFDNTDPASVG 60
Query 63 EARGLFPRHLDTIVNVPAPSWDAGDPRAYSVSDTANAWRNALDATVLSVVLTVQSVGDHL 122
+ G P HLD I+NVPAP+W GDPRAY+++D A WR DA +L+ VLTVQ +GDH+
Sbjct 61 DLHGQVPAHLDAIINVPAPTWVGGDPRAYTLTDHAAQWRGLFDANLLASVLTVQVLGDHM 120
Query 123 RSGGSIVSVVAENPPAGGAESAIKAALSNWIAGQAAVFGTRGITINTVACGRSVQTGYEG 182
RSGGSI++V+ + P GGA SA+KAA+S+W AG A FG RGITIN VA GR V+ GY+G
Sbjct 121 RSGGSIITVIPDLPEEGGAASAVKAAVSDWTAGLANHFGIRGITINAVAVGRGVEPGYDG 180
Query 183 LSRTPAPVAAEIARLALFLTTPAARHITGQTLHVSHGALAHF 224
+ TP P + EI+RL+LFLTTPAARHITGQTLHVSHGALA+F
Sbjct 181 VGATPPPASTEISRLSLFLTTPAARHITGQTLHVSHGALANF 222
>gi|169629518|ref|YP_001703167.1| short chain dehydrogenase [Mycobacterium abscessus ATCC 19977]
gi|169241485|emb|CAM62513.1| Putative short chain dehydrogenase/reductase [Mycobacterium abscessus]
Length=227
Score = 223 bits (567), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 117/221 (53%), Positives = 151/221 (69%), Gaps = 4/221 (1%)
Query 3 VEVLVTGGDTDLGRTMAEGFRNDGHKVTLVGARRGDLEVAAKELDVDAVVCDTTDPTSLT 62
++VLVTG ++GR +A FRN GH+V + G +LE+AAKEL+VDA+VCD DP SL
Sbjct 1 MDVLVTGAVNEVGRAVAAEFRNAGHRVVITGPNADELEIAAKELEVDAIVCDNADPDSLE 60
Query 63 EARGLFPRHLDTIVNVPAPSWDAGDPRAYSVSDTANAWRNALDATVLSVVLTVQSVGDHL 122
+ LFP+HLD IVN+P P W P +++DT AW + +++VL+ VLTVQ++GDHL
Sbjct 61 DNVELFPQHLDAIVNIPNPVWSEPGPHLGTLTDTGEAWLSRYESSVLTAVLTVQAIGDHL 120
Query 123 RSGGSIVSVVAENP-PAGGAESAIKAALSNWIAGQAAVFGTRGITINTVACGRSVQTGYE 181
RSG +I+++ GA +A KAALS W A QA GTRGITINT+A G+S + Y+
Sbjct 121 RSGAAIINLCTLGTRDRSGATTAAKAALSAWTAEQAERMGTRGITINTIAPGQSAEANYD 180
Query 182 GLSRTPAP---VAAEIARLALFLTTPAARHITGQTLHVSHG 219
GL T VA EIARLALFL +P ARHITGQTLHVS G
Sbjct 181 GLDSTEDAHELVAGEIARLALFLASPQARHITGQTLHVSRG 221
>gi|294816238|ref|ZP_06774881.1| oxidoreductase [Streptomyces clavuligerus ATCC 27064]
gi|326444568|ref|ZP_08219302.1| short-chain dehydrogenase/reductase SDR [Streptomyces clavuligerus
ATCC 27064]
gi|294328837|gb|EFG10480.1| oxidoreductase [Streptomyces clavuligerus ATCC 27064]
Length=247
Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 91/248 (37%), Positives = 127/248 (52%), Gaps = 33/248 (13%)
Query 1 MAVEVLVTGGDTDLGRTMAEGFRNDGHKVTLVGARRGDLEVAAKELDVDAVVCDTTDPTS 60
M ++L+TGG T +GR +A F + G +V + G R G L A+E A VCD TDP +
Sbjct 1 MTRDILITGGGTGIGRALARHFADAGDRVVVTGRRPGPLAAVARETGARAAVCDHTDPVA 60
Query 61 LTEARGLFPRHLDTIVNVPAPSWDAGDP--------RAYSVSDTANAWRNALDATVLSVV 112
LT P LD +VN + D DP A ++ A A+R LDA +L+ V
Sbjct 61 LTALLAELPATLDVLVNNAGGNTDFTDPGPVTGLEGTAAELALCARAFRANLDANLLTAV 120
Query 113 LTVQSVGDHLRSGGSIVSV--VAENPPAGGAESAIKAALSNWIAGQAAVFGTRGITINTV 170
LT ++VGD L GG+++ + +A + A G+ A KAAL+ W AA G R IT N V
Sbjct 121 LTTRAVGDRLAPGGAVIQIGSIAADQGA-GSYGAAKAALTTWNLDLAAELGARDITANVV 179
Query 171 ACGRSVQTGY------------------EGLSRTPAPVAAEIARLALFLTTPAARHITGQ 212
+ G + +T + G + TP +AA + FL +P ARHITGQ
Sbjct 180 SPGYTGETEFFRDRLSDTRRESLVAATATGRAGTPQDIAAAVG----FLASPGARHITGQ 235
Query 213 TLHVSHGA 220
LHV+ GA
Sbjct 236 VLHVNGGA 243
>gi|254391842|ref|ZP_05007036.1| 3-oxoacyl-[acyl-carrier-protein] reductase [Streptomyces clavuligerus
ATCC 27064]
gi|197705523|gb|EDY51335.1| 3-oxoacyl-[acyl-carrier-protein] reductase [Streptomyces clavuligerus
ATCC 27064]
Length=242
Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 84/233 (37%), Positives = 116/233 (50%), Gaps = 33/233 (14%)
Query 16 RTMAEGFRNDGHKVTLVGARRGDLEVAAKELDVDAVVCDTTDPTSLTEARGLFPRHLDTI 75
R +A F + G +V + G R G L A+E A VCD TDP +LT P LD +
Sbjct 11 RALARHFADAGDRVVVTGRRPGPLAAVARETGARAAVCDHTDPVALTALLAELPATLDVL 70
Query 76 VNVPAPSWDAGDP--------RAYSVSDTANAWRNALDATVLSVVLTVQSVGDHLRSGGS 127
VN + D DP A ++ A A+R LDA +L+ VLT ++VGD L GG+
Sbjct 71 VNNAGGNTDFTDPGPVTGLEGTAAELALCARAFRANLDANLLTAVLTTRAVGDRLAPGGA 130
Query 128 IVSV--VAENPPAGGAESAIKAALSNWIAGQAAVFGTRGITINTVACGRSVQTGY----- 180
++ + +A + A G+ A KAAL+ W AA G R IT N V+ G + +T +
Sbjct 131 VIQIGSIAADQGA-GSYGAAKAALTTWNLDLAAELGARDITANVVSPGYTGETEFFRDRL 189
Query 181 -------------EGLSRTPAPVAAEIARLALFLTTPAARHITGQTLHVSHGA 220
G + TP +AA + FL +P ARHITGQ LHV+ GA
Sbjct 190 SDTRRESLVAATATGRAGTPQDIAAAVG----FLASPGARHITGQVLHVNGGA 238
>gi|312197069|ref|YP_004017130.1| short-chain dehydrogenase/reductase SDR [Frankia sp. EuI1c]
gi|311228405|gb|ADP81260.1| short-chain dehydrogenase/reductase SDR [Frankia sp. EuI1c]
Length=244
Score = 107 bits (267), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/239 (34%), Positives = 118/239 (50%), Gaps = 20/239 (8%)
Query 1 MAVEVLVTGGDTDLGRTMAEGFRNDGHKVTLVGARRGDLEVAAKEL--DVDAVVCDTTDP 58
M+ V+++GG T +GR++A F +G++V ++G R L AA EL V VVCD DP
Sbjct 1 MSRSVVISGGGTGIGRSIARSFVENGNEVVIIGRRAAVLNTAATELGDRVRPVVCDLADP 60
Query 59 TSLTEARGLFPRHLDTIVNVPAPSWDAGDPRAYSVSDTANAWRNALDATVLSVVLTVQSV 118
++ A P +D +VN + PR S+++ W + A +L+ V +V
Sbjct 61 VAVQRALIELPARIDVLVNAAGANLATRTPRPDSLAEVVALWEGQVRANLLTTVALTCAV 120
Query 119 GDHLRSGGSIVSVVAENPPAGGAES----AIKAALSNWIAGQAAVFGTRGITINTVACGR 174
D L GG IV + +GG S KAA+ W G +A G+RGIT+N VA G
Sbjct 121 LDRLGPGGRIVGFSSGAARSGGPHSYGYGVAKAAVEAWARGLSAEVGSRGITVNAVAPGL 180
Query 175 SVQTGY-------EGLSR-------TPAPVAAEIARLALFLTTPAARHITGQTLHVSHG 219
+ T + E +R A ++A LFLT+P A HI+GQTL V G
Sbjct 181 TDGTEFFPADVDDETRARLVARADNRRAGTTGDVAAAVLFLTSPDAGHISGQTLAVDGG 239
>gi|256396641|ref|YP_003118205.1| short-chain dehydrogenase/reductase SDR [Catenulispora acidiphila
DSM 44928]
gi|256362867|gb|ACU76364.1| short-chain dehydrogenase/reductase SDR [Catenulispora acidiphila
DSM 44928]
Length=239
Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/240 (35%), Positives = 116/240 (49%), Gaps = 23/240 (9%)
Query 1 MAVEVLVTGGDTDLGRTMAEGFRNDGHKVTLVGARRGDLEVAAKELDVDAVVCDTTDPTS 60
M VLVTGG + +GR +A F DG V + G R +E A+E+ VVCD TDP +
Sbjct 1 MTRTVLVTGGSSGIGRAVAARFVADGADVVVTGRRAQLVETTAQEIGAAGVVCDATDPQA 60
Query 61 LTEARGLFPRHLDTIVNVPAPSWDAGDPR--AYSVSDTANAWRNALDATVLSVVLTVQSV 118
+ F LD +VN A + PR A ++ W+ LD +LS VLT ++
Sbjct 61 VEALAARFD-TLDVLVNA-AGGLGSAQPRPGAGALETVLAEWQADLDGNLLSAVLTTTAL 118
Query 119 GDHLRSGGSIVSV-VAENPPAGGAESAIKAALSNWIAGQAAVFGTRGITINTVACGRSVQ 177
L GG+ +++ + GG+ A KAAL+ W A +A G RG+T N V+ G
Sbjct 119 KPVLAPGGTAIAIGTIGSERRGGSYGAAKAALTAWYAMLSADLGPRGVTANVVSPGYIAD 178
Query 178 TGY----------------EGLSRTPAPVAAEIARLALFLTTPAARHITGQTLHVSHGAL 221
TG+ R AP +IA FL +P AR ITGQT+HV+ GA
Sbjct 179 TGFFRGAMTDAREQTLIAETHTKRAGAP--HDIAETVFFLASPGARQITGQTIHVNGGAF 236
>gi|134100225|ref|YP_001105886.1| 3-oxoacyl-[acyl-carrier-protein] reductase [Saccharopolyspora
erythraea NRRL 2338]
gi|291006553|ref|ZP_06564526.1| 3-oxoacyl-[acyl-carrier-protein] reductase [Saccharopolyspora
erythraea NRRL 2338]
gi|133912848|emb|CAM02961.1| 3-oxoacyl-[acyl-carrier-protein] reductase [Saccharopolyspora
erythraea NRRL 2338]
Length=238
Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/232 (35%), Positives = 109/232 (47%), Gaps = 15/232 (6%)
Query 4 EVLVTGGDTDLGRTMAEGFRNDGHKVTLVGARRGDLEVAAKELDVDAVVCDTTDPTSLTE 63
+++VTG + +G +AE F G VT+ G R L AA L AV D TDP ++
Sbjct 3 QIVVTGAGSGIGYAIAEHFAASGDAVTITGRRPEVLHRAADTLGARAVPFDATDPDAVEA 62
Query 64 ARGLFPRHLDTIVNVPAPSWDAGDPRAYSVSDTANAWRNALDATVLSVVLTVQSVGDHLR 123
A P H+D +VN + D P + A W L + VLS VL ++ L
Sbjct 63 ALESLPDHVDVVVNNAGANTDFERPEPDGLRALAQQWEANLASNVLSAVLVTAALTPRLT 122
Query 124 SGGSIVSVVAENPPAG-GAESAIKAALSNWIAGQAAVFGTRGITINTVACGRSVQTGY-- 180
G +V++ + G G+ A KAA+ W A A G RGIT N +A G + TG+
Sbjct 123 DGARVVTIGSIAARQGAGSYGAAKAAVEAWTADLAGQLGPRGITANVIAPGLTEHTGFFQ 182
Query 181 EGL------------SRTPAPVAAEIARLALFLTTPAARHITGQTLHVSHGA 220
GL A A+IA L FL +P A HITGQ LHV+ GA
Sbjct 183 NGLPDHVRQTLVAATRNQRAGTPADIAALTGFLASPQAGHITGQVLHVNGGA 234
>gi|284031480|ref|YP_003381411.1| short-chain dehydrogenase/reductase SDR [Kribbella flavida DSM
17836]
gi|283810773|gb|ADB32612.1| short-chain dehydrogenase/reductase SDR [Kribbella flavida DSM
17836]
Length=238
Score = 102 bits (254), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 88/245 (36%), Positives = 113/245 (47%), Gaps = 34/245 (13%)
Query 1 MAVEVLVTGGDTDLGRTMAEGFRNDGHKVTLVGARRGD-LEVAAKELDVDAVVCDTTDPT 59
MA ++VTGG T +GR AE FR DG V + G RRGD L A EL A+VCD DP
Sbjct 1 MARTIVVTGGATGIGRATAERFRADGDDVVITG-RRGDVLTRTADELGAKAIVCDAADPA 59
Query 60 SLTEARGLFPRHLDTIVNVPAPSWDAGDPRA-YSVSDTANAWRNALDATVLSVVLTVQSV 118
+ P +D +VN + D P A + W +A VLS VLT ++
Sbjct 60 QVAAFAEQLPGRIDVLVNNAGGNTDLETPAAGDDLQRLRRNWLANYEANVLSAVLTTSAL 119
Query 119 GDHLRSG----GSIVSVVAENPPAGGAESAIKAALSNWIAGQAAVFGTRGITINTVACGR 174
L + GSI GG+ A K+AL+ W AA G RG+T N VA G
Sbjct 120 AARLTTAVIHLGSIAGT-----RGGGSYGAAKSALATWSLEVAAELGPRGVTSNVVAPGY 174
Query 175 SVQTGY------------------EGLSRTPAPVAAEIARLALFLTTPAARHITGQTLHV 216
+ T + + TPA VAA I F+ +P A H+TGQ LHV
Sbjct 175 TADTEFFRDQLTDERRTWLLDSTMTKRAGTPADVAAVIH----FVASPQAGHVTGQVLHV 230
Query 217 SHGAL 221
+ GAL
Sbjct 231 NGGAL 235
>gi|291302433|ref|YP_003513711.1| short-chain dehydrogenase/reductase SDR [Stackebrandtia nassauensis
DSM 44728]
gi|290571653|gb|ADD44618.1| short-chain dehydrogenase/reductase SDR [Stackebrandtia nassauensis
DSM 44728]
Length=241
Score = 99.0 bits (245), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 73/224 (33%), Positives = 108/224 (49%), Gaps = 21/224 (9%)
Query 16 RTMAEGFRNDGHKVTLVGARRGDLEVAAKEL--DVDAVVCDTTDPTSLTEARGLFPRHLD 73
R +A F G V + G R+ L+ +L D+ A+ CD TDP L P +D
Sbjct 16 RAVAARFAEAGDSVVITGRRQAVLDKTVADLGGDIRAITCDHTDPEQLAALAAALPERVD 75
Query 74 TIVNVPAPSWDAGDPRAYSVSDTANAWRNALDATVLSVVLTVQSVGDHLRSGGSIVSVVA 133
+VN + D G ++ AW LD ++S LT +++G+ L SGGS++ + +
Sbjct 76 VLVNNAGGNTDIGTETPSGLAGLGRAWLANLDTNLISAALTTEAIGERLGSGGSVIHIGS 135
Query 134 ENPPAG-GAESAIKAALSNWIAGQAAVFGTRGITINTVACGRSVQTGYEG---------- 182
G G A KA L++W G A GTR IT N ++ G +T + G
Sbjct 136 IAADKGNGFYGAAKAGLASWNIGLARELGTRDITSNVISPGYISETEFFGDVMTEQRRAA 195
Query 183 ------LSRTPAPVAAEIARLALFLTTPAARHITGQTLHVSHGA 220
+ R P A+IA A FL +P AR++TGQTL+V+ GA
Sbjct 196 LIEATFVKRVGIP--ADIAGAAWFLASPDARYVTGQTLNVNGGA 237
>gi|226308780|ref|YP_002768740.1| oxidoreductase [Rhodococcus erythropolis PR4]
gi|226187897|dbj|BAH36001.1| putative oxidoreductase [Rhodococcus erythropolis PR4]
Length=241
Score = 98.6 bits (244), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 82/236 (35%), Positives = 112/236 (48%), Gaps = 17/236 (7%)
Query 1 MAVEVLVTGGDTDLGRTMAEGFRNDGHKVTLVGARRGDLEVAAKEL--DVDAVVCDTTDP 58
M VLVTGG T +GR +A F DG V + G R LE A+EL DV A+ CD +DP
Sbjct 1 MTRTVLVTGGGTGIGRAVAAAFARDGDTVFVTGRRTEPLEKTAEELGSDVHALTCDNSDP 60
Query 59 TSLTEARGLFPRHLDTIVNVPAPSWDAGDPRAYSVSDTANAWRNALDATVLSVVLTVQSV 118
L + P +D +V+ + D + A WR LD+ ++S VLT +V
Sbjct 61 KDLKRLQDSLPGTIDVVVHCAGGNTDFDREAPSDLESLAAGWRANLDSNLISAVLTTAAV 120
Query 119 GDHLRSGGSIVSVVA-ENPPAGGAESAIKAALSNWIAGQAAVFGTRGITINTVACGRSVQ 177
D + SGG+++++ + GA A KAA++ W AA G GIT N V+ G
Sbjct 121 RDRIPSGGAVITIGSIAADKGAGAYGAAKAAVATWNIDLAAELGPEGITANIVSPGYIAD 180
Query 178 TGY--------------EGLSRTPAPVAAEIARLALFLTTPAARHITGQTLHVSHG 219
T + E S A +IA FL +P AR ITGQ L V+ G
Sbjct 181 TEFFRDFLTDERRAMLIESTSTKRAGTPDDIASAVHFLASPGARQITGQVLAVNGG 236
>gi|302545655|ref|ZP_07297997.1| 3-oxoacyl-(acyl-carrier-protein) reductase [Streptomyces hygroscopicus
ATCC 53653]
gi|302463273|gb|EFL26366.1| 3-oxoacyl-(acyl-carrier-protein) reductase [Streptomyces himastatinicus
ATCC 53653]
Length=239
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/239 (36%), Positives = 114/239 (48%), Gaps = 23/239 (9%)
Query 1 MAVEVLVTGGDTDLGRTMAEGFRNDGHKVTLVGARRGDLEVAAKELDVDAVVCDTTDPTS 60
M+ +L+TGG T +GR +A F G V + G R G L+ A E V A+VCD T+P +
Sbjct 1 MSRNILITGGGTGIGRAVARHFAERGEHVIVTGRRPGPLKELADEAGVHALVCDHTEPEA 60
Query 61 LTEARGLFPRHLDTIVNVPAPSWDAGDPRAYSVSDTANAWRNALDATVLSVVLTVQSVGD 120
L P LD +VN + D ++ A +R LDA ++S LT Q V
Sbjct 61 LVGLPAELPDRLDVLVNNAGGNTDFDADGKSDLASYARDFRANLDANLVSAALTTQCVDG 120
Query 121 HLRSGGSIV---SVVAENPPAGGAESAIKAALSNWIAGQAAVFGTRGITINTVACGRSVQ 177
L SGG++V S+ A+ GA A KA L+ W A G RGIT N V+ G
Sbjct 121 RLASGGAVVHIGSIAADQ--GAGAYGASKAGLAAWNVDLAGRLGPRGITANVVSPGYIAD 178
Query 178 TGY----------------EGLSRTPAPVAAEIARLALFLTTPAARHITGQTLHVSHGA 220
T + R +P +IA FL +PAARHITGQ L+V+ GA
Sbjct 179 TEFFRDQLTDERREWLIASTATGRPGSPT--DIAEAVAFLASPAARHITGQVLNVNGGA 235
>gi|229489268|ref|ZP_04383134.1| 3-oxoacyl-[acyl-carrier-protein] reductase [Rhodococcus erythropolis
SK121]
gi|229324772|gb|EEN90527.1| 3-oxoacyl-[acyl-carrier-protein] reductase [Rhodococcus erythropolis
SK121]
Length=241
Score = 95.5 bits (236), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 80/236 (34%), Positives = 111/236 (48%), Gaps = 17/236 (7%)
Query 1 MAVEVLVTGGDTDLGRTMAEGFRNDGHKVTLVGARRGDLEVAAKEL--DVDAVVCDTTDP 58
M VLVTGG T +GR +A F DG V + G R LE A+EL +V A+ CD +DP
Sbjct 1 MTRTVLVTGGGTGIGRAVAAAFARDGDTVFVTGRRTETLEKTAEELGDNVHALTCDNSDP 60
Query 59 TSLTEARGLFPRHLDTIVNVPAPSWDAGDPRAYSVSDTANAWRNALDATVLSVVLTVQSV 118
L + P +D + + + D + A WR LD+ ++S VLT +V
Sbjct 61 KDLKRLQDSLPGTIDVVAHCAGGNTDFDREAPSDLESLAAGWRANLDSNLISAVLTTAAV 120
Query 119 GDHLRSGGSIVSVVA-ENPPAGGAESAIKAALSNWIAGQAAVFGTRGITINTVACGRSVQ 177
D + SGG+++++ + GA A KAA++ W AA G GIT N V+ G
Sbjct 121 RDRIPSGGAVITIGSIAADKGAGAYGAAKAAVATWNVDLAAELGPEGITANIVSPGYIAD 180
Query 178 TGY--------------EGLSRTPAPVAAEIARLALFLTTPAARHITGQTLHVSHG 219
T + E S A +IA FL +P AR ITGQ L V+ G
Sbjct 181 TEFFRDFLTDERRAMLIESTSTKRAGTPDDIASAVHFLASPGARQITGQVLAVNGG 236
>gi|332669331|ref|YP_004452339.1| short-chain dehydrogenase/reductase SDR [Cellulomonas fimi ATCC
484]
gi|332338369|gb|AEE44952.1| short-chain dehydrogenase/reductase SDR [Cellulomonas fimi ATCC
484]
Length=237
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/242 (33%), Positives = 108/242 (45%), Gaps = 31/242 (12%)
Query 1 MAVEVLVTGGDTDLGRTMAEGFRNDGHKVTLVGARRGDLEVAAKELDVDAVVCDTTDPTS 60
MA +VL+TGG +GR A F G V LV R D+ A+++ + D DP S
Sbjct 1 MARQVLITGGTRGIGRATAARFVALGDDV-LVTGRGPDVAATARQVGARGIRLDLEDPES 59
Query 61 LTEARGLFPRHLDTIVNV-----PAPSWDAGDPRAYSVSDTANAWRNALDATVLSVVLTV 115
+ R + N P P AG ++D A W L ++ VL V
Sbjct 60 VGTLRDDLDAVDVVVNNAGGFVGPPPPAGAG------LADVAAHWHRGLAVNLVGAVLVV 113
Query 116 QSVGDHLRSGGSIVSVVAENPP-AGGAESAIKAALSNWIAGQAAVFGTRGITINTVACG- 173
++ D LR+GG++VSV + AG S KAAL W G + G R +T+N VA G
Sbjct 114 TALEDRLRAGGAVVSVGSIGAEYAGNPYSVAKAALQAWSVGLSERLGPRDVTVNAVAPGY 173
Query 174 ---------------RSVQTGYEGLSRTPAPVAAEIARLALFLTTPAARHITGQTLHVSH 218
R G L R P ++A +FL + ARH+TGQT+HV+
Sbjct 174 VEGTDLFGGPLDAERRRTLVGRTSLGRPATP--EDVAGTVVFLASADARHLTGQTVHVNG 231
Query 219 GA 220
GA
Sbjct 232 GA 233
>gi|271962845|ref|YP_003337041.1| short chain dehydrogenase protein [Streptosporangium roseum DSM
43021]
gi|270506020|gb|ACZ84298.1| short chain dehydrogenase protein [Streptosporangium roseum DSM
43021]
Length=240
Score = 85.5 bits (210), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 81/238 (35%), Positives = 116/238 (49%), Gaps = 25/238 (10%)
Query 4 EVLVTGGDTDLGRTMAEGFRNDGHKVTLVGARRGDLEVAAKELDVDAVVCDTTDPTSLTE 63
E++VTGG T +G +A F G +VT+ G R L+ A L V V + +P ++ E
Sbjct 3 EIVVTGGGTGIGAAVAAAFAAHGDRVTITGRREQVLKETADRLGVSHVAFNAANPVAVGE 62
Query 64 ARGLFPRHLDTIVNVPAPSWDAGD-PRAYSVSDTANAWRNALDATVLSVVLTVQSVGDHL 122
A P +D +VN + + P + D A +W L+A ++S VL ++ L
Sbjct 63 ALERLPDRVDVLVNNAGGNTNLDRAPDGDDLMDVAESWWANLNANLMSAVLVTSALTPRL 122
Query 123 RSGGSIVSV--VAENPPAGGAESAIKAALSNWIAGQAAVFGTRGITINTVACGRSVQTGY 180
GG IV++ +A G+ A KAA+ W A AA G RG+T N V+ G V T +
Sbjct 123 ADGGRIVTIGSIAARGTGSGSYGAAKAAVEAWTADLAAELGPRGVTANVVSPGLVVDTEF 182
Query 181 -------EGLSR-----------TPAPVAAEIARLALFLTTPAARHITGQTLHVSHGA 220
EG+ R TP VAA + FL +P ARHITGQ +HV+ GA
Sbjct 183 FRGRLTEEGVRRRVESTRNGRPGTPDDVAATVR----FLASPEARHITGQVVHVNGGA 236
>gi|222108964|ref|YP_002551230.1| short chain dehydrogenase protein [Agrobacterium radiobacter
K84]
gi|221727886|gb|ACM30936.1| short chain dehydrogenase protein [Agrobacterium radiobacter
K84]
Length=250
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/236 (31%), Positives = 109/236 (47%), Gaps = 36/236 (15%)
Query 16 RTMAEGFRNDGHKVTLVGARRGDLEVAAKELDVDAVVCDTTDPTSLTEARGLFPRHLDTI 75
R A F +G+KV + G R+ LE +A L V+AV D +DP ++ A P +D +
Sbjct 16 RACAAHFAAEGNKVIITGRRKEVLEESAASLGVEAVAFDASDPFAVAAALEKLPTSVDVL 75
Query 76 VNVPAPSWD-----------AGDPRAYSVSDTANAWRNALDATVLSVVLTVQSVGDHLRS 124
+N + D A +P+ + + A+ W+ +A VLS VL +++ L
Sbjct 76 INNAGGNTDLSHAALSTAISAPEPQGR-LEEIASRWQANFEANVLSAVLVTEALAARLTD 134
Query 125 GGSIVSV--VAENPPAGGAESAIKAALSNWIAGQAAVFGTRGITINTVACG--------- 173
I+++ +A GG+ A KAA+ W A A G+RGIT N VA G
Sbjct 135 NARIITIGSIAGRTGGGGSYGAAKAAIEAWTADLARSLGSRGITANVVAPGLIESTEFFQ 194
Query 174 ---------RSVQTGYEGLSRTPAPVAAEIARLALFLTTPAARHITGQTLHVSHGA 220
R V+ + + P V A +A FL P+A H+TGQ + V+ GA
Sbjct 195 GRLADERRARLVEATFTKRAGQPKDVVAAVA----FLALPSAGHVTGQVIPVNGGA 246
>gi|326334087|ref|ZP_08200315.1| 3-oxoacyl-acyl carrier protein reductase [Nocardioidaceae bacterium
Broad-1]
gi|325948138|gb|EGD40250.1| 3-oxoacyl-acyl carrier protein reductase [Nocardioidaceae bacterium
Broad-1]
Length=240
Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 83/242 (35%), Positives = 110/242 (46%), Gaps = 32/242 (13%)
Query 6 LVTGGDTDLGRTMAEGFRNDGHKVTLVGARRGDLEVAAKELD-------VDAVVCDTTDP 58
+VTGG T LGR +A+ DG +VT+VG R LE A KE++ V VV D DP
Sbjct 1 MVTGGGTGLGRAIADRLAADGLEVTIVGRRAEVLETATKEINAAVGADQVTYVVADCADP 60
Query 59 TSLTEARGLFPRHLDTIV-NVPAPSWDAGDPRAYSVSDTANAWRNALDATVLSVVLTVQS 117
+ P +D +V N + GD + A+ W VL+ VL V++
Sbjct 61 GDVRALADACPDRVDVLVLNAGGLTPSTGD----DLEALAHDWAADYRLNVLTAVLPVEA 116
Query 118 VGDHL-RSGGSIV---SVVAENPPAGGAESAIKAALSNWIAGQAAVFGTRGITINTVACG 173
+ L R GG IV S+ A P G+ A K A++ WI G AA GIT N VA G
Sbjct 117 LLPRLARPGGRIVAMSSIAALRGP--GSYGASKGAINTWITGLAAEVAADGITANAVAPG 174
Query 174 RSVQTGYEGLSRTPAPVAA--------------EIARLALFLTTPAARHITGQTLHVSHG 219
T + R+P +A EIA L LT+P A TGQ + + G
Sbjct 175 FVPDTEFWDSRRSPELIAQRTSQIPVGRPGAPEEIAALVAHLTSPDAGFTTGQVVGIHGG 234
Query 220 AL 221
AL
Sbjct 235 AL 236
>gi|159036112|ref|YP_001535365.1| short-chain dehydrogenase/reductase SDR [Salinispora arenicola
CNS-205]
gi|157914947|gb|ABV96374.1| short-chain dehydrogenase/reductase SDR [Salinispora arenicola
CNS-205]
Length=248
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/223 (33%), Positives = 104/223 (47%), Gaps = 29/223 (13%)
Query 25 DGHKVTLVGARRGDLEVAAKELDVD--------AVVCDTTDPTSLTE-ARGLFPRHLDTI 75
DG V +VG R L + D AVV D DP ++ A + R +D +
Sbjct 26 DGFDVLVVGRREEALRATTARISWDIARPGAVRAVVADLADPEQVSRVAETVEGRAVDAV 85
Query 76 VNVPAPSWDAGDPRAYSVSDTANAWRNALDATVLSVVLTVQSVGDHLRSGGS---IVSVV 132
+N A S+ GD + +++ A+ WR LDA +L+ VL +++ LR G +VS +
Sbjct 86 IN-NAGSYRGGD--SGTLAGVAHQWRANLDANILTAVLLTEALRPALRRPGGRVILVSSI 142
Query 133 AENPPAGGAESAIKAALSNWIAGQAAVFGTRGITINTVACGRSVQTGYEGLSRTPA---- 188
A GG SA KAAL W AA G IT+N V+ G T + G TP
Sbjct 143 AAQQGGGGPYSAAKAALHGWAYDLAAQLGPEQITVNVVSPGYVTDTEFFGGRMTPQGHAR 202
Query 189 PVAA----------EIARLALFLTTPAARHITGQTLHVSHGAL 221
VAA +IA +L PAA ++TGQ L V+ G++
Sbjct 203 RVAATLVGRAGTPDDIAEAVRYLAGPAAGYVTGQVLGVNGGSV 245
>gi|337765846|emb|CCB74555.1| conserved protein of unknown function [Streptomyces cattleya
NRRL 8057]
Length=255
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 73/236 (31%), Positives = 103/236 (44%), Gaps = 33/236 (13%)
Query 12 TDLGRTMAEGFRNDGHKVTLVGARRGDLEVAAKE------LDVDAVVCDTTDPTSLTEAR 65
T +GR +AE F G ++ +VG RR L AA E L V + CD DP + A
Sbjct 24 TGIGRAIAERFAAAGDRLVIVGRRREVLRTAADEISAAHGLAVTPITCDLADPDDVEAAL 83
Query 66 GLFPRHLDTIVNVPAPSWDAGDPRAYSVSDTANA----WRNALDATVLSVVLTVQSVGDH 121
P +D +VN +AG R +V + WR + VL+ VL +SV D
Sbjct 84 ARLPERIDVLVN------NAGS-REVAVGAGPHGILARWRGDFERNVLTAVLVTESVKDR 136
Query 122 L-RSGGSIVSVVAENP-PAGGAESAIKAALSNWIAGQAAVFGTRGITINTVACGRSVQTG 179
L R G +++V + GG+ A KAAL W AA G +G+T N VA G T
Sbjct 137 LTRDRGRVITVTSLAALRGGGSYGASKAALHAWNHSLAAQLGPQGVTCNVVAPGTVAGTE 196
Query 180 YEGLSRTPAPVA--------------AEIARLALFLTTPAARHITGQTLHVSHGAL 221
+ G A + ++A +FL + A ITG+ L + G L
Sbjct 197 FFGARLNEAELTRRAGRTLVGRVGRPGDVAAAVVFLASEEAGFITGEILQCNGGEL 252
>gi|302540248|ref|ZP_07292590.1| short-chain dehydrogenase/reductase family oxidoreductase [Streptomyces
hygroscopicus ATCC 53653]
gi|302457866|gb|EFL20959.1| short-chain dehydrogenase/reductase family oxidoreductase [Streptomyces
himastatinicus ATCC 53653]
Length=251
Score = 75.5 bits (184), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 81/252 (33%), Positives = 113/252 (45%), Gaps = 41/252 (16%)
Query 1 MAVEVLVTGGDTDLGRTMAEGFRNDGHKVTLVGARRGDLEVAAKELDV---DAVV----C 53
M ++V+GG T +G AE F DG +V +VG R L AA +L+ D +V
Sbjct 5 MGRRIVVSGGGTGIGLATAESFAADGDRVVIVGRRTEVLRAAADKLNATHGDGLVTWTAA 64
Query 54 DTTDPTSLTEARGLFPRH--LDTIV-----NVPAPSWDAGDPRAYSVSDTANAWRNALDA 106
D +DP A +D IV NV AP D ++ A+ ++ A
Sbjct 65 DLSDPGQTRRAADEIAADGPVDVIVTNAGGNV-APGNDG------TLEGIADQYQRNFAA 117
Query 107 TVLSVVLTVQSVGDHL-RSGGSIV---SVVAENPPAGGAESAIKAALSNWIAGQAAVFGT 162
VL+ VL +++ H+ R GG IV SV A P G+ KAAL + A G
Sbjct 118 NVLTAVLLTEALIPHIARPGGRIVHLSSVAALRGP--GSYGGTKAALHTYTFELAKRLGA 175
Query 163 RGITINTVACGRSVQTGYEGLSRTPAPVA--------------AEIARLALFLTTPAARH 208
G+T N VA G T + G TP +A AEIA +L +P A +
Sbjct 176 EGVTANAVAPGYVEDTEFFGERGTPEFIAQQIGQTLTGQPGVPAEIAAAIRYLASPEAAY 235
Query 209 ITGQTLHVSHGA 220
+TGQ LH++ GA
Sbjct 236 VTGQVLHINGGA 247
>gi|145592940|ref|YP_001157237.1| short-chain dehydrogenase/reductase SDR [Salinispora tropica
CNB-440]
gi|145302277|gb|ABP52859.1| short-chain dehydrogenase/reductase SDR [Salinispora tropica
CNB-440]
Length=280
Score = 75.1 bits (183), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 71/223 (32%), Positives = 99/223 (45%), Gaps = 29/223 (13%)
Query 25 DGHKVTLVGARRGDLEVAAKELDVD--------AVVCDTTDPTSLTEA-RGLFPRHLDTI 75
DG V +VG R L L D AVV D TDP + + R +D +
Sbjct 58 DGFDVLVVGRREDALRATTARLSWDLARPGAVRAVVADLTDPQQVPRVVEAVDGRAVDAV 117
Query 76 VNVPAPSWDAGDPRAYSVSDTANAWRNALDATVLSVVLTVQSVGDHLRSGGS---IVSVV 132
VN A + G+P +++ A WR +L+A +L+ VL +++ LR G +VS
Sbjct 118 VN-NAGGYLGGEPD--TLAGVAEQWRASLEANLLTAVLLTEALRPTLRRPGGRVILVSSA 174
Query 133 AENPPAGGAESAIKAALSNWIAGQAAVFGTRGITINTVACGRSVQTGYEGLSRTP----- 187
A GG SA KAAL W A G +T+N V+ G V T + G RTP
Sbjct 175 AAQQGGGGPHSAAKAALHGWAYDLAVRLGPDQVTVNVVSPGYVVDTEFFGGRRTPEGHAR 234
Query 188 ---------APVAAEIARLALFLTTPAARHITGQTLHVSHGAL 221
A +IA +L PAA ++TGQ L V G++
Sbjct 235 RVAATLVGRAGTPDDIAAAVRYLAGPAAGYVTGQVLGVDGGSV 277
>gi|311898812|dbj|BAJ31220.1| putative oxidoreductase [Kitasatospora setae KM-6054]
Length=239
Score = 74.7 bits (182), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 76/226 (34%), Positives = 103/226 (46%), Gaps = 29/226 (12%)
Query 18 MAEGFRNDGHKVTLVGARRGDLEVAAKEL--DVDAVVCDTTDPTSLTEARGLFPRHLDTI 75
+A F G +V +VG R G L+ AA+E+ +V +VCD DP ++ A P +D +
Sbjct 18 VARRFAEAGERVVIVGRRPGVLDQAAQEIGTNVTPLVCDLADPDAVEAALPALPARIDVL 77
Query 76 VNVPAPSWDAGDPRAYSVSDTANA----WRNALDATVLSVVLTVQSVGDHLRSG-GSIVS 130
VN +AG R + +A WR + VL+ VL +SV D L G G +V+
Sbjct 78 VN------NAGS-RETVLGAGPHAVLARWRGDFERNVLTAVLLTESVRDRLTPGSGRVVT 130
Query 131 VVAENPPAG-GAESAIKAALSNWIAGQAAVFGTRGITINTVACGRSVQTGYEGLSRTPAP 189
V + G G+ A KA+L W AA G GIT N VA G T + G A
Sbjct 131 VSSIAALRGAGSYGAAKASLHAWNHFLAAQLGPSGITANIVAPGTVAGTEFFGPRLDDAE 190
Query 190 VAAEIARLAL--------------FLTTPAARHITGQTLHVSHGAL 221
VA AR L FL + A ITG+ LH + G L
Sbjct 191 VARRSARTLLGRIGESGEVAAAVCFLASAEAGFITGEILHCNGGEL 236
>gi|297155572|gb|ADI05284.1| Putative 3-oxacyl-ACP reductase [Streptomyces bingchenggensis
BCW-1]
Length=247
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 81/257 (32%), Positives = 113/257 (44%), Gaps = 43/257 (16%)
Query 1 MAVEVLVTGGDTDLGRTMAEGFRNDGHKVTLVGARRGDLEVAAKELD-------VDAVVC 53
M ++V+GG T +G AE F DG +V +VG R L AA++++ V
Sbjct 1 MGRRIVVSGGGTGIGLATAESFAADGDRVVIVGRRAEVLRAAAEKVNAATGADLVTWTSA 60
Query 54 DTTDPTSLTEARGLFPRH--LDTIV-----NVPAPSWDAGDPRAYSVSDTANAWRNALDA 106
D +DP A +D +V NV AP D ++ A+ ++ A
Sbjct 61 DLSDPEQTRSAAEFIAADGPVDVVVTNAGGNV-APGNDG------TLEGIADQFQRNFSA 113
Query 107 TVLSVVLTVQSVGDHL-RSGGSIV---SVVAENPPAGGAESAIKAALSNWIAGQAAVFGT 162
VL+ VL +++ HL R GG IV SV A P G+ KA L + A G
Sbjct 114 NVLTAVLLTEALLPHLTRPGGRIVHLSSVAALRGP--GSYGGTKAHLHVYTYDLAKRLGA 171
Query 163 RGITINTVACGRSVQTGYEGLSRTPAPVA--------------AEIARLALFLTTPAARH 208
GIT N VA G T + G TP +A AEIA +L +P A +
Sbjct 172 EGITANAVAPGYVQDTEFFGERGTPEFIAQQIGQTLTGQPGYPAEIAAAIRYLASPEAAY 231
Query 209 ITGQTLHVSHGALAHFG 225
+TGQ LH++ G A FG
Sbjct 232 VTGQVLHINGG--AQFG 246
>gi|316305717|gb|ADU56362.1| 3-oxoacyl-ACP reductase [Streptomyces sp. ATCC 55098]
Length=220
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/220 (31%), Positives = 97/220 (45%), Gaps = 24/220 (10%)
Query 28 KVTLVGARRGDLEVAAKELD--VDAVVCDTTDPTSLTEARGLFPRHLDTIVNVP--APSW 83
+V + G R LE A EL V + D +DP ++ A P +D +VN A +
Sbjct 2 EVVITGRRAEILERTAAELGPLVTPLAFDASDPAAVEAALPQLPDRVDVLVNNAGGATEY 61
Query 84 DAGDPRAYSVSDTANAWRNALDATVLSVVLTVQSVGDHLRSGGSIV---SVVAENPPAGG 140
D P + + AW +DA +++ VL ++ + GGSIV S+ A A G
Sbjct 62 DHAMPPREQLKELREAWLRNIDANLMTAVLMTSALEPRIPDGGSIVVIGSIAARGFGASG 121
Query 141 -AESAIKAALSNWIAGQAAVFGTRGITINTVACGRSVQTG--------------YEGLSR 185
KAAL W A G RGI++N V+ G +V E +
Sbjct 122 YGYGPAKAALEPWATDLAHELGARGISVNVVSPGFTVSNDRARDFVASGDASPLIESGAT 181
Query 186 TPAPVAAEIARLALFLTTPAARHITGQTLHVSHGALAHFG 225
A ++A + FLTTPAA TGQT+HV+ G H G
Sbjct 182 KRATEVDDVAAMVAFLTTPAAAQTTGQTIHVNGG--THLG 219
>gi|302530269|ref|ZP_07282611.1| 3-oxoacyl-[acyl-carrier-protein] reductase [Streptomyces sp.
AA4]
gi|302439164|gb|EFL10980.1| 3-oxoacyl-[acyl-carrier-protein] reductase [Streptomyces sp.
AA4]
Length=238
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/213 (32%), Positives = 92/213 (44%), Gaps = 21/213 (9%)
Query 26 GHKVTLVGARRGDLEVAAKELDVDAVVCDTTDPTSLTEARGLFPRHLDTIVNVPAPSWDA 85
G +VT+ G R L AA L AV D +DP ++ A P +D +VN + D
Sbjct 26 GDQVTITGRREDVLTEAASLLGARAVSFDASDPEAVEAALDQLPERVDVLVNNAGGNTDF 85
Query 86 GDPRAYSVSDTANAWRNALDATVLSVVLTVQSVGDHLRSGGSIVSVVAENPPAG--GAES 143
+ + AW L A + S ++ D L G IV++ AG GAES
Sbjct 86 LHADSGGLKALDAAWTANLRANLFSAAFVTTALKDRLADNGRIVTI---GSIAGHTGAES 142
Query 144 A--IKAALSNWIAGQAAVFGTRGITINTVACGRSVQTGY--------------EGLSRTP 187
KAA+ W A FG RGIT N VA G V T + E
Sbjct 143 YGWAKAAVEVWNTETARQFGPRGITANIVAPGLIVDTEFFRGKLSAERQEWLVENTMTKR 202
Query 188 APVAAEIARLALFLTTPAARHITGQTLHVSHGA 220
A ++A + FL +P A H+TGQ +HV+ GA
Sbjct 203 AGKPDDVAEVVRFLASPEAGHVTGQVVHVNGGA 235
>gi|238025266|ref|YP_002909498.1| putative 3-oxacyl-ACP reductase [Burkholderia glumae BGR1]
gi|237879931|gb|ACR32263.1| Putative 3-oxacyl-ACP reductase [Burkholderia glumae BGR1]
Length=256
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/260 (30%), Positives = 111/260 (43%), Gaps = 48/260 (18%)
Query 1 MAVEVLVTGGDTDLGRTMAEGFRNDGHKVTLVGARRGDLEVAAKEL--------DVDAVV 52
M+ V+V+GG T +G A F G +V +VG R L A E+ V +
Sbjct 1 MSETVVVSGGGTGIGLAAARYFARRGAQVVIVGRRETVLARAVDEIAQAAPGAPRVLPLR 60
Query 53 CDTTDPTSLTEARGLFP---RHLDTIVNVPA-------PSWDAGDPRAYSVSDTANAWRN 102
D ++P + R R +D +VN P+ D D ++ A W +
Sbjct 61 ADLSEPAQVESLRDALVERFRTVDVLVNAAGGHVLRQRPASDYAD----GLAGVARRWTD 116
Query 103 ALDATVLSVVLTVQSVGDHL-RSGGSIV---SVVAENPPAGGAESAIKAALSNWIAGQAA 158
L LS VL +++ HL + GG IV S+ A G A KAAL + A A
Sbjct 117 NLRMNTLSAVLLTEALVPHLSKPGGRIVLVSSIAAFRGSGQGCYGASKAALHPYCADLAK 176
Query 159 VFGTRGITINTVACGRSVQTGY------------------EGLSRTPAPVAAEIARLALF 200
G +G+T+NTVA G V T + G + TP +A I +
Sbjct 177 ALGPKGVTVNTVAPGFVVDTEFFGGALNERQRQDKIAEAVNGRAGTPDDIANTIG----W 232
Query 201 LTTPAARHITGQTLHVSHGA 220
L +P A HITGQ +HV+ GA
Sbjct 233 LASPEALHITGQVIHVNGGA 252
>gi|300783255|ref|YP_003763546.1| 3-oxoacyl-[acyl-carrier-protein] reductase [Amycolatopsis mediterranei
U32]
gi|299792769|gb|ADJ43144.1| 3-oxoacyl-[acyl-carrier-protein] reductase [Amycolatopsis mediterranei
U32]
gi|340524636|gb|AEK39841.1| 3-oxoacyl-[acyl-carrier-protein] reductase [Amycolatopsis mediterranei
S699]
Length=242
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/214 (33%), Positives = 97/214 (46%), Gaps = 22/214 (10%)
Query 26 GHKVTLVGARRGDLEVAAKELDVDAVVCDTTDPTSLTEARGLFPRHLDTIVNVPAPSWD- 84
G +VT+ G R+ LE AA+E+ AV D +DP ++ A P +D +VN + D
Sbjct 28 GERVTVTGRRKDVLEAAAEEIGARAVAFDASDPAAVQAALAELPARVDVLVNNAGGNTDR 87
Query 85 -AGDPRAYSVSDTANAWRNALDATVLSVVLTVQSVGDHLRSGGSIVSVVAENPPAG-GAE 142
P A + A+AW+ +A VLS VL ++ +V++ + G G+
Sbjct 88 VREAPAAGDLKGLADAWQANFEANVLSAVLVTAALKPRFADNVRVVTLGSIAAKQGSGSY 147
Query 143 SAIKAALSNWIAGQAAVFGTRGITINTVACGRSVQTGY-------EGLS---------RT 186
A KAA+ W A G G T N VA G + T + E LS R
Sbjct 148 GAAKAAIEAWNTDLARQLGAAG-TANVVAPGVVLDTEFFHGTLTEEWLSSRIAIAFNQRA 206
Query 187 PAPVAAEIARLALFLTTPAARHITGQTLHVSHGA 220
P EIA FL P A H+TGQ +HV+ GA
Sbjct 207 GRP--EEIADTVRFLAAPEAAHLTGQVVHVNGGA 238
>gi|300790037|ref|YP_003770328.1| 3-oxoacyl-[acyl-carrier-protein] reductase [Amycolatopsis mediterranei
U32]
gi|299799551|gb|ADJ49926.1| 3-oxoacyl-[acyl-carrier-protein] reductase [Amycolatopsis mediterranei
U32]
gi|340531713|gb|AEK46918.1| 3-oxoacyl-[acyl-carrier-protein] reductase [Amycolatopsis mediterranei
S699]
Length=242
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/212 (30%), Positives = 95/212 (45%), Gaps = 18/212 (8%)
Query 26 GHKVTLVGARRGDLEVAAKELDVDAVVCDTTDPTSLTEARGLFPRHLDTIVNVPAPSWDA 85
G +VT+ G R L AA VV D DP ++ A P +D +VN + D
Sbjct 28 GERVTITGRREKVLTEAAALAGARPVVFDAADPVAVEGALDELPGRVDVLVNNAGGNTDF 87
Query 86 GDPRAYS-VSDTANAWRNALDATVLSVVLTVQSVGDHLRSGGSIVSVVAENPPAG-GAES 143
D ++ A A+ L + V+S L ++ D L G I+++ + G G+
Sbjct 88 LDGDGEEGLAGFAAAFERNLRSNVVSAALVTHALRDRLGEGARIITIGSIAAHTGAGSYG 147
Query 144 AIKAALSNWIAGQAAVFGTRGITINTVACGRSVQTGY---------------EGLSRTPA 188
A KAA+ W A FG RGIT N VA G +T + +++ P
Sbjct 148 AAKAAVEGWNVSVARQFGPRGITANVVAPGLIGETEFFHGQLSDQRRDRLIGNTMNKRPG 207
Query 189 PVAAEIARLALFLTTPAARHITGQTLHVSHGA 220
++ + FL +PAA H+TGQ +HV+ GA
Sbjct 208 -TPDDVVAVVTFLASPAAGHVTGQVVHVNGGA 238
>gi|333372061|ref|ZP_08463997.1| 3-oxoacyl-[acyl-carrier-protein] reductase [Desmospora sp. 8437]
gi|332974969|gb|EGK11879.1| 3-oxoacyl-[acyl-carrier-protein] reductase [Desmospora sp. 8437]
Length=260
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/246 (29%), Positives = 108/246 (44%), Gaps = 33/246 (13%)
Query 6 LVTGGDTDLGRTMAEGFRNDGHKVTLVGARRGDLEVAAKELDVDA---VVCDTTDPTSLT 62
LVT G LGR +A +G +V L G G+ E +A+E+ + VV D +
Sbjct 11 LVTAGSRGLGRAVALELAREGARVALAGRDLGNAEQSAEEIASETGSEVVGWRCDVSRGE 70
Query 63 EARGLFPRHLDTIVNVPAPSWDAGDPR--AYSVSDTANAWRNALDATVLSVVLTVQSVGD 120
E R L R D V +AG P A+ D +AW+ A + +LSVV V++
Sbjct 71 EVRELVDRAADRFQGVDLLVCNAGGPPGGAFDALDD-DAWQKAFETNLLSVVRLVRATLP 129
Query 121 HLRSGGSIVSV----VAENPPAGGAESAIKAALSNWIAGQAAVFGTRGITINTVACGRSV 176
H++ GG I+++ V + P + ++A ++ + + G RGI +NT+ GR
Sbjct 130 HMKDGGRILTIASSSVKQPIPGLILSNTMRAGVAGLMKTLSEELGPRGILVNTLCPGRIA 189
Query 177 QTGYEGLSRTPA------------------PVA-----AEIARLALFLTTPAARHITGQT 213
L R A P+ AE AR A+FL + A +ITG +
Sbjct 190 TDRLRELDRLKAEREGKPEEVIQRESLRGIPLGRYGEPAEFARTAVFLLSRANTYITGTS 249
Query 214 LHVSHG 219
L V G
Sbjct 250 LMVDGG 255
>gi|345011260|ref|YP_004813614.1| short-chain dehydrogenase/reductase SDR [Streptomyces violaceusniger
Tu 4113]
gi|344037609|gb|AEM83334.1| short-chain dehydrogenase/reductase SDR [Streptomyces violaceusniger
Tu 4113]
Length=247
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 72/245 (30%), Positives = 104/245 (43%), Gaps = 27/245 (11%)
Query 1 MAVEVLVTGGDTDLGRTMAEGFRNDGHKVTLVGARRGDLEVAAKELD-------VDAVVC 53
M ++V+GG T +G AE F +G +V ++G R L AA +L+ V
Sbjct 1 MGRRIVVSGGGTGIGLAAAETFAAEGDRVVILGRRAEVLRTAADKLNAAYGPDLVTWTSA 60
Query 54 DTTDPTSLTEARGLFPRHLDTIVNVPAPSWDAGDPRAYSVSDTANAWRNALDATVLSVVL 113
D +DP A V V + ++ A+ ++ A VL+ VL
Sbjct 61 DLSDPEQTRRAAEFIAADGGVDVVVTNAGGNVAASNDGTLEGIADQYQRNFAANVLTAVL 120
Query 114 TVQSVGDHL-RSGGSIV---SVVAENPPAGGAESAIKAALSNWIAGQAAVFGTRGITINT 169
+++ HL R GG IV SV A P G+ KAAL + A G G+T N
Sbjct 121 LTEALLPHLTRPGGRIVHLSSVAALRGP--GSYGGTKAALHTYTFELAKRLGPEGVTANA 178
Query 170 VACGRSVQTGYEGLSRTPAPVA--------------AEIARLALFLTTPAARHITGQTLH 215
VA G T + G TP +A EIA +L +P A ++TGQ LH
Sbjct 179 VAPGYVEDTEFFGDRGTPEFIAQQIGQTLTGQPGTPVEIAAAIRYLASPEAAYVTGQVLH 238
Query 216 VSHGA 220
++ GA
Sbjct 239 INGGA 243
>gi|298249729|ref|ZP_06973533.1| short-chain dehydrogenase/reductase SDR [Ktedonobacter racemifer
DSM 44963]
gi|297547733|gb|EFH81600.1| short-chain dehydrogenase/reductase SDR [Ktedonobacter racemifer
DSM 44963]
Length=250
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/250 (28%), Positives = 109/250 (44%), Gaps = 35/250 (14%)
Query 1 MAVEVLVTGGDTDLGRTMAEGFRNDGHKVTLVGARRGDLEVAAKEL---------DVDAV 51
A +++TGG++ +GR MAE F +G +V ++G R L A+EL DV
Sbjct 4 QARRIIITGGNSGMGRAMAERFAREGAQVAIIGRDRNTLRATAEELGSQVSWYQADVSQR 63
Query 52 VCDTTDPTSLTEARGLFPRHLDTIVNVPAPSWDAGDPRAYSVSDTANAWRNALDATVLSV 111
+ T++ E G +D ++N A + G + + W +DA +
Sbjct 64 EQVQSTVTAIVEQWG----QVDVLIN--AAGFVRGATTDMPLDEAEREWDAVIDANLKGS 117
Query 112 VLTVQSVGDHL-RSGGSIVSVVAENPPAGG------AESAIKAALSNWIAGQAAVFGTRG 164
L +VG +L R GG I+ + + GG A +A KA L G A ++
Sbjct 118 FLMTVAVGPYLVRPGGRIIYISSIAAFTGGSRAGSTAYAASKAGLHGLTYGFARELSSQS 177
Query 165 ITINTVACGRSVQTGYEG----------LSRTPAPVAAEIARLAL---FLTTPAARHITG 211
IT+N VA G TG+ G + TPA + + +L +P A +TG
Sbjct 178 ITVNAVAPGYIADTGFTGAWTDEKINGIIKETPAGRGGHVDDVVAAVHYLASPEASFVTG 237
Query 212 QTLHVSHGAL 221
+ L+V+ G L
Sbjct 238 EVLNVNGGWL 247
>gi|330470238|ref|YP_004407981.1| short-chain dehydrogenase/reductase SDR [Verrucosispora maris
AB-18-032]
gi|328813209|gb|AEB47381.1| short-chain dehydrogenase/reductase SDR [Verrucosispora maris
AB-18-032]
Length=242
Score = 68.6 bits (166), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 74/242 (31%), Positives = 106/242 (44%), Gaps = 29/242 (11%)
Query 6 LVTGGDTDLGRTMAEGFRNDGHKVTLVGARRGDLEVAAKELD--------VDAVVCDTTD 57
+V+GG T +G +A DG V ++G R L A+ + V AV D TD
Sbjct 1 MVSGGGTGIGAAVARTLVADGCSVLVLGRRAEVLATTAERIGAETGRPEAVRAVSVDLTD 60
Query 58 PTSLTEA-RGLFPRHLDTIVNVPAPSWDAGDPRAYSVSDTANAWRNALDATVLSVVLTVQ 116
P + + R +D +VN A D +++ A WR LD VL+ VL
Sbjct 61 PEQIGRVVEAVDGRPVDVLVNNAGGFHSAQDD---TLAGIAANWRATLDTNVLTAVLLTA 117
Query 117 SVGDHLRSGGS---IVSVVAENPPAGGAESAIKAALSNWIAGQAAVFGTRGITINTVACG 173
++ LR G ++S +A G A SA KAAL W AA G IT+N V+ G
Sbjct 118 ALRPALRRPGGRVILISSIAAQRGGGDAYSAAKAALHGWAYSLAAELGPEQITVNVVSPG 177
Query 174 RSVQTGYEGLSRTP----APVAA----------EIARLALFLTTPAARHITGQTLHVSHG 219
+T + TP VAA +IA +L +PAA +T Q L V+ G
Sbjct 178 YVAETEFFVGRMTPEGHAKRVAATLVGRAGTPDDIAESVRYLASPAASFVTAQILGVNGG 237
Query 220 AL 221
++
Sbjct 238 SV 239
>gi|167583993|ref|ZP_02376381.1| putative 3-oxacyl-ACP reductase [Burkholderia ubonensis Bu]
Length=258
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 77/252 (31%), Positives = 110/252 (44%), Gaps = 32/252 (12%)
Query 1 MAVEVLVTGGDTDLGRTMAEGFRNDGHKVTLVGARRGDLEVAAKELD--------VDAVV 52
M+ V+V+GG T +G A F G +V +VG R L AA+++ V +V
Sbjct 3 MSQLVVVSGGGTGIGFATARHFAQRGAQVAIVGRRADVLAHAAEQIGNAFPDAPGVAPLV 62
Query 53 CDTTDPTSLTE-ARGLFPRH--LDTIVNVPAPS-WDAGDPRAYS--VSDTANAWRNALDA 106
D P + R L R +D IVN P AY+ ++ A W +
Sbjct 63 ADLAVPEQVEAIVRALTARFPTVDAIVNAAGGHVLRQSPPDAYADGLAGVARRWTDNFRK 122
Query 107 TVLSVVLTVQSVGDHLRS-GGSIV---SVVAENPPAGGAESAIKAALSNWIAGQAAVFGT 162
LS VL +++ HLR GG IV S+ A G A KAAL + A A G
Sbjct 123 NTLSAVLLTEALLPHLRQPGGRIVFLSSIAAFRGSGVGCYGASKAALHPYTADLAKALGP 182
Query 163 RGITINTVACGRSVQTGYEGLSRTPAP--------------VAAEIARLALFLTTPAARH 208
+G+T+NTVA G T + G + + A +IA +L +P A H
Sbjct 183 KGVTVNTVAPGFVADTEFFGAALSDAQRKDKVAESLNGRAGTPDDIANTIGWLASPDALH 242
Query 209 ITGQTLHVSHGA 220
+TGQ + V+ GA
Sbjct 243 VTGQVIQVNGGA 254
Lambda K H
0.316 0.131 0.385
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 289298170616
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40