BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv1860
Length=325
Score E
Sequences producing significant alignments: (Bits) Value
gi|57116926|ref|YP_177849.1| hypothetical protein Rv1860 [Mycoba... 616 1e-174
gi|15841328|ref|NP_336365.1| fibronectin attachment protein [Myc... 614 7e-174
gi|308369541|ref|ZP_07666748.1| alanine and proline rich secrete... 612 3e-173
gi|289569936|ref|ZP_06450163.1| alanine and proline rich secrete... 608 3e-172
gi|289750435|ref|ZP_06509813.1| conserved hypothetical protein [... 565 3e-159
gi|289750439|ref|ZP_06509817.1| alanine and proline rich secrete... 558 4e-157
gi|1470355|gb|AAB36458.1| MPT-32=45 kda culture filtrate glycopr... 539 2e-151
gi|254550871|ref|ZP_05141318.1| hypothetical protein Mtube_10501... 386 3e-105
gi|15828109|ref|NP_302372.1| cell surface protein (associated wi... 333 3e-89
gi|240173548|ref|ZP_04752206.1| alanine and proline rich secrete... 323 3e-86
gi|183982743|ref|YP_001851034.1| alanine and proline rich secret... 310 2e-82
gi|118618407|ref|YP_906739.1| alanine and proline rich secreted ... 306 2e-81
gi|167970340|ref|ZP_02552617.1| alanine and proline rich secrete... 301 1e-79
gi|342861243|ref|ZP_08717891.1| ModD protein [Mycobacterium colo... 284 2e-74
gi|296165976|ref|ZP_06848433.1| fibronectin attachment protein [... 276 4e-72
gi|333990588|ref|YP_004523202.1| alanine and proline rich secret... 274 1e-71
gi|254822051|ref|ZP_05227052.1| ModD protein [Mycobacterium intr... 267 2e-69
gi|336457617|gb|EGO36622.1| Fibronectin-attachment protein (FAP)... 266 5e-69
gi|118464964|ref|YP_882045.1| ModD protein [Mycobacterium avium ... 265 6e-69
gi|41407667|ref|NP_960503.1| ModD [Mycobacterium avium subsp. pa... 265 6e-69
gi|82395167|gb|ABB72055.1| ModD [Mycobacterium avium subsp. para... 265 6e-69
gi|254775335|ref|ZP_05216851.1| ModD protein [Mycobacterium aviu... 265 1e-68
gi|7387896|sp|Q48919.1|APA_MYCAV RecName: Full=Alanine and proli... 246 4e-63
gi|118469719|ref|YP_887921.1| alanine and proline-rich hypotheti... 216 3e-54
gi|315444263|ref|YP_004077142.1| Fibronectin-attachment protein ... 215 9e-54
gi|145223931|ref|YP_001134609.1| fibronectin-attachment family p... 215 9e-54
gi|126435403|ref|YP_001071094.1| fibronectin-attachment family p... 209 4e-52
gi|108799762|ref|YP_639959.1| fibronectin-attachment [Mycobacter... 209 4e-52
gi|120404054|ref|YP_953883.1| fibronectin-attachment family prot... 201 1e-49
gi|18092163|gb|AAL59141.1|AF395912_1 fibronectin-attachment muta... 197 2e-48
gi|169629522|ref|YP_001703171.1| hypothetical protein MAB_2436 [... 143 3e-32
gi|2578369|emb|CAA15433.1| antigen 43L [Mycobacterium leprae] 38.1 1.9
>gi|57116926|ref|YP_177849.1| hypothetical protein Rv1860 [Mycobacterium tuberculosis H37Rv]
gi|148661666|ref|YP_001283189.1| alanine and proline rich secreted protein Apa [Mycobacterium
tuberculosis H37Ra]
gi|308231960|ref|ZP_07663960.1| alanine and proline rich secreted protein apa [Mycobacterium
tuberculosis SUMu001]
12 more sequence titles
Length=325
Score = 616 bits (1589), Expect = 1e-174, Method: Compositional matrix adjust.
Identities = 325/325 (100%), Positives = 325/325 (100%), Gaps = 0/325 (0%)
Query 1 MHQVDPNLTRRKGRLAALAIAAMASASLVTVAVPATANADPEPAPPVPTTAASPPSTAAA 60
MHQVDPNLTRRKGRLAALAIAAMASASLVTVAVPATANADPEPAPPVPTTAASPPSTAAA
Sbjct 1 MHQVDPNLTRRKGRLAALAIAAMASASLVTVAVPATANADPEPAPPVPTTAASPPSTAAA 60
Query 61 PPAPATPVAPPPPAAANTPNAQPGDPNAAPPPADPNAPPPPVIAPNAPQPVRIDNPVGGF 120
PPAPATPVAPPPPAAANTPNAQPGDPNAAPPPADPNAPPPPVIAPNAPQPVRIDNPVGGF
Sbjct 61 PPAPATPVAPPPPAAANTPNAQPGDPNAAPPPADPNAPPPPVIAPNAPQPVRIDNPVGGF 120
Query 121 SFALPAGWVESDAAHFDYGSALLSKTTGDPPFPGQPPPVANDTRIVLGRLDQKLYASAEA 180
SFALPAGWVESDAAHFDYGSALLSKTTGDPPFPGQPPPVANDTRIVLGRLDQKLYASAEA
Sbjct 121 SFALPAGWVESDAAHFDYGSALLSKTTGDPPFPGQPPPVANDTRIVLGRLDQKLYASAEA 180
Query 181 TDSKAAARLGSDMGEFYMPYPGTRINQETVSLDANGVSGSASYYEVKFSDPSKPNGQIWT 240
TDSKAAARLGSDMGEFYMPYPGTRINQETVSLDANGVSGSASYYEVKFSDPSKPNGQIWT
Sbjct 181 TDSKAAARLGSDMGEFYMPYPGTRINQETVSLDANGVSGSASYYEVKFSDPSKPNGQIWT 240
Query 241 GVIGSPAANAPDAGPPQRWFVVWLGTANNPVDKGAAKALAESIRPLVAPPPAPAPAPAEP 300
GVIGSPAANAPDAGPPQRWFVVWLGTANNPVDKGAAKALAESIRPLVAPPPAPAPAPAEP
Sbjct 241 GVIGSPAANAPDAGPPQRWFVVWLGTANNPVDKGAAKALAESIRPLVAPPPAPAPAPAEP 300
Query 301 APAPAPAGEVAPTPTTPTPQRTLPA 325
APAPAPAGEVAPTPTTPTPQRTLPA
Sbjct 301 APAPAPAGEVAPTPTTPTPQRTLPA 325
>gi|15841328|ref|NP_336365.1| fibronectin attachment protein [Mycobacterium tuberculosis CDC1551]
gi|31793050|ref|NP_855543.1| hypothetical protein Mb1891 [Mycobacterium bovis AF2122/97]
gi|121637763|ref|YP_977986.1| alanine and proline rich secreted protein apa [Mycobacterium
bovis BCG str. Pasteur 1173P2]
51 more sequence titles
Length=325
Score = 614 bits (1583), Expect = 7e-174, Method: Compositional matrix adjust.
Identities = 324/325 (99%), Positives = 324/325 (99%), Gaps = 0/325 (0%)
Query 1 MHQVDPNLTRRKGRLAALAIAAMASASLVTVAVPATANADPEPAPPVPTTAASPPSTAAA 60
MHQVDPNLTRRKGRLAALAIAAMASASLVTVAVPATANADPEPAPPVPTTAASPPSTAAA
Sbjct 1 MHQVDPNLTRRKGRLAALAIAAMASASLVTVAVPATANADPEPAPPVPTTAASPPSTAAA 60
Query 61 PPAPATPVAPPPPAAANTPNAQPGDPNAAPPPADPNAPPPPVIAPNAPQPVRIDNPVGGF 120
PPAPATPVAPPPPAAANTPNAQPGDPNAAPPPADPNAPPPPVIAPNAPQPVRIDNPVGGF
Sbjct 61 PPAPATPVAPPPPAAANTPNAQPGDPNAAPPPADPNAPPPPVIAPNAPQPVRIDNPVGGF 120
Query 121 SFALPAGWVESDAAHFDYGSALLSKTTGDPPFPGQPPPVANDTRIVLGRLDQKLYASAEA 180
SFALPAGWVESDAAH DYGSALLSKTTGDPPFPGQPPPVANDTRIVLGRLDQKLYASAEA
Sbjct 121 SFALPAGWVESDAAHLDYGSALLSKTTGDPPFPGQPPPVANDTRIVLGRLDQKLYASAEA 180
Query 181 TDSKAAARLGSDMGEFYMPYPGTRINQETVSLDANGVSGSASYYEVKFSDPSKPNGQIWT 240
TDSKAAARLGSDMGEFYMPYPGTRINQETVSLDANGVSGSASYYEVKFSDPSKPNGQIWT
Sbjct 181 TDSKAAARLGSDMGEFYMPYPGTRINQETVSLDANGVSGSASYYEVKFSDPSKPNGQIWT 240
Query 241 GVIGSPAANAPDAGPPQRWFVVWLGTANNPVDKGAAKALAESIRPLVAPPPAPAPAPAEP 300
GVIGSPAANAPDAGPPQRWFVVWLGTANNPVDKGAAKALAESIRPLVAPPPAPAPAPAEP
Sbjct 241 GVIGSPAANAPDAGPPQRWFVVWLGTANNPVDKGAAKALAESIRPLVAPPPAPAPAPAEP 300
Query 301 APAPAPAGEVAPTPTTPTPQRTLPA 325
APAPAPAGEVAPTPTTPTPQRTLPA
Sbjct 301 APAPAPAGEVAPTPTTPTPQRTLPA 325
>gi|308369541|ref|ZP_07666748.1| alanine and proline rich secreted protein apa [Mycobacterium
tuberculosis SUMu002]
gi|308372071|ref|ZP_07667292.1| alanine and proline rich secreted protein apa [Mycobacterium
tuberculosis SUMu004]
gi|308373253|ref|ZP_07667540.1| alanine and proline rich secreted protein apa [Mycobacterium
tuberculosis SUMu005]
gi|308327222|gb|EFP16073.1| alanine and proline rich secreted protein apa [Mycobacterium
tuberculosis SUMu002]
gi|308334491|gb|EFP23342.1| alanine and proline rich secreted protein apa [Mycobacterium
tuberculosis SUMu004]
gi|308338284|gb|EFP27135.1| alanine and proline rich secreted protein apa [Mycobacterium
tuberculosis SUMu005]
Length=325
Score = 612 bits (1578), Expect = 3e-173, Method: Compositional matrix adjust.
Identities = 323/325 (99%), Positives = 323/325 (99%), Gaps = 0/325 (0%)
Query 1 MHQVDPNLTRRKGRLAALAIAAMASASLVTVAVPATANADPEPAPPVPTTAASPPSTAAA 60
MHQVDPNLTRRKGRLAALAIAAMASASLVTVAVPATANADPEPAPPVPTTAASPPSTAAA
Sbjct 1 MHQVDPNLTRRKGRLAALAIAAMASASLVTVAVPATANADPEPAPPVPTTAASPPSTAAA 60
Query 61 PPAPATPVAPPPPAAANTPNAQPGDPNAAPPPADPNAPPPPVIAPNAPQPVRIDNPVGGF 120
PPAPATPVAPPPPAAANTPNAQPGDPNAAPPPADPNAPPPPVIAPNAPQPVRIDNPVGGF
Sbjct 61 PPAPATPVAPPPPAAANTPNAQPGDPNAAPPPADPNAPPPPVIAPNAPQPVRIDNPVGGF 120
Query 121 SFALPAGWVESDAAHFDYGSALLSKTTGDPPFPGQPPPVANDTRIVLGRLDQKLYASAEA 180
SFALPAGWVESDAAH DYGSALLSK TGDPPFPGQPPPVANDTRIVLGRLDQKLYASAEA
Sbjct 121 SFALPAGWVESDAAHLDYGSALLSKNTGDPPFPGQPPPVANDTRIVLGRLDQKLYASAEA 180
Query 181 TDSKAAARLGSDMGEFYMPYPGTRINQETVSLDANGVSGSASYYEVKFSDPSKPNGQIWT 240
TDSKAAARLGSDMGEFYMPYPGTRINQETVSLDANGVSGSASYYEVKFSDPSKPNGQIWT
Sbjct 181 TDSKAAARLGSDMGEFYMPYPGTRINQETVSLDANGVSGSASYYEVKFSDPSKPNGQIWT 240
Query 241 GVIGSPAANAPDAGPPQRWFVVWLGTANNPVDKGAAKALAESIRPLVAPPPAPAPAPAEP 300
GVIGSPAANAPDAGPPQRWFVVWLGTANNPVDKGAAKALAESIRPLVAPPPAPAPAPAEP
Sbjct 241 GVIGSPAANAPDAGPPQRWFVVWLGTANNPVDKGAAKALAESIRPLVAPPPAPAPAPAEP 300
Query 301 APAPAPAGEVAPTPTTPTPQRTLPA 325
APAPAPAGEVAPTPTTPTPQRTLPA
Sbjct 301 APAPAPAGEVAPTPTTPTPQRTLPA 325
>gi|289569936|ref|ZP_06450163.1| alanine and proline rich secreted protein apa [Mycobacterium
tuberculosis T17]
gi|289543690|gb|EFD47338.1| alanine and proline rich secreted protein apa [Mycobacterium
tuberculosis T17]
Length=325
Score = 608 bits (1568), Expect = 3e-172, Method: Compositional matrix adjust.
Identities = 322/325 (99%), Positives = 322/325 (99%), Gaps = 0/325 (0%)
Query 1 MHQVDPNLTRRKGRLAALAIAAMASASLVTVAVPATANADPEPAPPVPTTAASPPSTAAA 60
MHQVDPNLTRRKGRLAALAIAAMASASLVTVAVPATANADPEPAPPVPTTAASPPSTAAA
Sbjct 1 MHQVDPNLTRRKGRLAALAIAAMASASLVTVAVPATANADPEPAPPVPTTAASPPSTAAA 60
Query 61 PPAPATPVAPPPPAAANTPNAQPGDPNAAPPPADPNAPPPPVIAPNAPQPVRIDNPVGGF 120
PPAPATPVAPPPPAAANTPNAQPGDPNAAPPPADPNAPPPPVIAPNAPQPVRIDNPVGGF
Sbjct 61 PPAPATPVAPPPPAAANTPNAQPGDPNAAPPPADPNAPPPPVIAPNAPQPVRIDNPVGGF 120
Query 121 SFALPAGWVESDAAHFDYGSALLSKTTGDPPFPGQPPPVANDTRIVLGRLDQKLYASAEA 180
SFALPAGWVESDAAH DYGSALLSKTTGDP PGQPPPVANDTRIVLGRLDQKLYASAEA
Sbjct 121 SFALPAGWVESDAAHLDYGSALLSKTTGDPAIPGQPPPVANDTRIVLGRLDQKLYASAEA 180
Query 181 TDSKAAARLGSDMGEFYMPYPGTRINQETVSLDANGVSGSASYYEVKFSDPSKPNGQIWT 240
TDSKAAARLGSDMGEFYMPYPGTRINQETVSLDANGVSGSASYYEVKFSDPSKPNGQIWT
Sbjct 181 TDSKAAARLGSDMGEFYMPYPGTRINQETVSLDANGVSGSASYYEVKFSDPSKPNGQIWT 240
Query 241 GVIGSPAANAPDAGPPQRWFVVWLGTANNPVDKGAAKALAESIRPLVAPPPAPAPAPAEP 300
GVIGSPAANAPDAGPPQRWFVVWLGTANNPVDKGAAKALAESIRPLVAPPPAPAPAPAEP
Sbjct 241 GVIGSPAANAPDAGPPQRWFVVWLGTANNPVDKGAAKALAESIRPLVAPPPAPAPAPAEP 300
Query 301 APAPAPAGEVAPTPTTPTPQRTLPA 325
APAPAPAGEVAPTPTTPTPQRTLPA
Sbjct 301 APAPAPAGEVAPTPTTPTPQRTLPA 325
>gi|289750435|ref|ZP_06509813.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
gi|289691022|gb|EFD58451.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
Length=313
Score = 565 bits (1457), Expect = 3e-159, Method: Compositional matrix adjust.
Identities = 296/298 (99%), Positives = 296/298 (99%), Gaps = 0/298 (0%)
Query 1 MHQVDPNLTRRKGRLAALAIAAMASASLVTVAVPATANADPEPAPPVPTTAASPPSTAAA 60
MHQVDPNLTRRKGRLAALAIAAMASASLVTVAVPATANADPEPAPPVPTTAASPPSTAAA
Sbjct 1 MHQVDPNLTRRKGRLAALAIAAMASASLVTVAVPATANADPEPAPPVPTTAASPPSTAAA 60
Query 61 PPAPATPVAPPPPAAANTPNAQPGDPNAAPPPADPNAPPPPVIAPNAPQPVRIDNPVGGF 120
PPAPATPVAPPPPAAANTPNAQPGDPNAAPPPADPNAPPPPVIAPNAPQPVRIDNPVGGF
Sbjct 61 PPAPATPVAPPPPAAANTPNAQPGDPNAAPPPADPNAPPPPVIAPNAPQPVRIDNPVGGF 120
Query 121 SFALPAGWVESDAAHFDYGSALLSKTTGDPPFPGQPPPVANDTRIVLGRLDQKLYASAEA 180
SFALPAGWVESDAAH DYGSALLSKTTGDPPFPGQPPPVANDTRIVLGRLDQKLYASAEA
Sbjct 121 SFALPAGWVESDAAHLDYGSALLSKTTGDPPFPGQPPPVANDTRIVLGRLDQKLYASAEA 180
Query 181 TDSKAAARLGSDMGEFYMPYPGTRINQETVSLDANGVSGSASYYEVKFSDPSKPNGQIWT 240
TDSKAAARLGSDMGEFYMPYPGTRINQETVSLDANGVSGSASYYEVKFSDPSKPNGQIWT
Sbjct 181 TDSKAAARLGSDMGEFYMPYPGTRINQETVSLDANGVSGSASYYEVKFSDPSKPNGQIWT 240
Query 241 GVIGSPAANAPDAGPPQRWFVVWLGTANNPVDKGAAKALAESIRPLVAPPPAPAPAPA 298
GVIGSPAANAPDAGPPQRWFVVWLGTANNPVDKGAAKALAESIRPLVAPPP PAPAPA
Sbjct 241 GVIGSPAANAPDAGPPQRWFVVWLGTANNPVDKGAAKALAESIRPLVAPPPVPAPAPA 298
>gi|289750439|ref|ZP_06509817.1| alanine and proline rich secreted protein apa [Mycobacterium
tuberculosis T92]
gi|289691026|gb|EFD58455.1| alanine and proline rich secreted protein apa [Mycobacterium
tuberculosis T92]
Length=291
Score = 558 bits (1438), Expect = 4e-157, Method: Compositional matrix adjust.
Identities = 290/291 (99%), Positives = 290/291 (99%), Gaps = 0/291 (0%)
Query 1 MHQVDPNLTRRKGRLAALAIAAMASASLVTVAVPATANADPEPAPPVPTTAASPPSTAAA 60
MHQVDPNLTRRKGRLAALAIAAMASASLVTVAVPATANADPEPAPPVPTTAASPPSTAAA
Sbjct 1 MHQVDPNLTRRKGRLAALAIAAMASASLVTVAVPATANADPEPAPPVPTTAASPPSTAAA 60
Query 61 PPAPATPVAPPPPAAANTPNAQPGDPNAAPPPADPNAPPPPVIAPNAPQPVRIDNPVGGF 120
PPAPATPVAPPPPAAANTPNAQPGDPNAAPPPADPNAPPPPVIAPNAPQPVRIDNPVGGF
Sbjct 61 PPAPATPVAPPPPAAANTPNAQPGDPNAAPPPADPNAPPPPVIAPNAPQPVRIDNPVGGF 120
Query 121 SFALPAGWVESDAAHFDYGSALLSKTTGDPPFPGQPPPVANDTRIVLGRLDQKLYASAEA 180
SFALPAGWVESDAAH DYGSALLSKTTGDPPFPGQPPPVANDTRIVLGRLDQKLYASAEA
Sbjct 121 SFALPAGWVESDAAHLDYGSALLSKTTGDPPFPGQPPPVANDTRIVLGRLDQKLYASAEA 180
Query 181 TDSKAAARLGSDMGEFYMPYPGTRINQETVSLDANGVSGSASYYEVKFSDPSKPNGQIWT 240
TDSKAAARLGSDMGEFYMPYPGTRINQETVSLDANGVSGSASYYEVKFSDPSKPNGQIWT
Sbjct 181 TDSKAAARLGSDMGEFYMPYPGTRINQETVSLDANGVSGSASYYEVKFSDPSKPNGQIWT 240
Query 241 GVIGSPAANAPDAGPPQRWFVVWLGTANNPVDKGAAKALAESIRPLVAPPP 291
GVIGSPAANAPDAGPPQRWFVVWLGTANNPVDKGAAKALAESIRPLVAPPP
Sbjct 241 GVIGSPAANAPDAGPPQRWFVVWLGTANNPVDKGAAKALAESIRPLVAPPP 291
>gi|1470355|gb|AAB36458.1| MPT-32=45 kda culture filtrate glycoprotein [Mycobacterium tuberculosis,
Erdman, Peptide, 286 aa]
Length=286
Score = 539 bits (1389), Expect = 2e-151, Method: Compositional matrix adjust.
Identities = 285/286 (99%), Positives = 286/286 (100%), Gaps = 0/286 (0%)
Query 40 DPEPAPPVPTTAASPPSTAAAPPAPATPVAPPPPAAANTPNAQPGDPNAAPPPADPNAPP 99
DPEPAPPVPTTAASPPSTAAAPPAPATPVAPPPPAAANTPNAQPGDPNAAPPPADPNAPP
Sbjct 1 DPEPAPPVPTTAASPPSTAAAPPAPATPVAPPPPAAANTPNAQPGDPNAAPPPADPNAPP 60
Query 100 PPVIAPNAPQPVRIDNPVGGFSFALPAGWVESDAAHFDYGSALLSKTTGDPPFPGQPPPV 159
PPVIAPNAPQPVRIDNPVGGFSFALPAGWVESDAAHFDYGSALL+KTTGDPPFPGQPPPV
Sbjct 61 PPVIAPNAPQPVRIDNPVGGFSFALPAGWVESDAAHFDYGSALLAKTTGDPPFPGQPPPV 120
Query 160 ANDTRIVLGRLDQKLYASAEATDSKAAARLGSDMGEFYMPYPGTRINQETVSLDANGVSG 219
ANDTRIVLGRLDQKLYASAEATDSKAAARLGSDMGEFYMPYPGTRINQETVSLDANGVSG
Sbjct 121 ANDTRIVLGRLDQKLYASAEATDSKAAARLGSDMGEFYMPYPGTRINQETVSLDANGVSG 180
Query 220 SASYYEVKFSDPSKPNGQIWTGVIGSPAANAPDAGPPQRWFVVWLGTANNPVDKGAAKAL 279
SASYYEVKFSDPSKPNGQIWTGVIGSPAANAPDAGPPQRWFVVWLGTANNPVDKGAAKAL
Sbjct 181 SASYYEVKFSDPSKPNGQIWTGVIGSPAANAPDAGPPQRWFVVWLGTANNPVDKGAAKAL 240
Query 280 AESIRPLVAPPPAPAPAPAEPAPAPAPAGEVAPTPTTPTPQRTLPA 325
AESIRPLVAPPPAPAPAPAEPAPAPAPAGEVAPTPTTPTPQRTLPA
Sbjct 241 AESIRPLVAPPPAPAPAPAEPAPAPAPAGEVAPTPTTPTPQRTLPA 286
>gi|254550871|ref|ZP_05141318.1| hypothetical protein Mtube_10501 [Mycobacterium tuberculosis
'98-R604 INH-RIF-EM']
gi|294996769|ref|ZP_06802460.1| hypothetical protein Mtub2_20253 [Mycobacterium tuberculosis
210]
gi|297634421|ref|ZP_06952201.1| hypothetical protein MtubK4_09881 [Mycobacterium tuberculosis
KZN 4207]
gi|297731408|ref|ZP_06960526.1| hypothetical protein MtubKR_09981 [Mycobacterium tuberculosis
KZN R506]
gi|313658742|ref|ZP_07815622.1| hypothetical protein MtubKV_09996 [Mycobacterium tuberculosis
KZN V2475]
Length=197
Score = 386 bits (991), Expect = 3e-105, Method: Compositional matrix adjust.
Identities = 195/197 (99%), Positives = 196/197 (99%), Gaps = 0/197 (0%)
Query 129 VESDAAHFDYGSALLSKTTGDPPFPGQPPPVANDTRIVLGRLDQKLYASAEATDSKAAAR 188
+ESDAAH DYGSALLSKTTGDPPFPGQPPPVANDTRIVLGRLDQKLYASAEATDSKAAAR
Sbjct 1 MESDAAHLDYGSALLSKTTGDPPFPGQPPPVANDTRIVLGRLDQKLYASAEATDSKAAAR 60
Query 189 LGSDMGEFYMPYPGTRINQETVSLDANGVSGSASYYEVKFSDPSKPNGQIWTGVIGSPAA 248
LGSDMGEFYMPYPGTRINQETVSLDANGVSGSASYYEVKFSDPSKPNGQIWTGVIGSPAA
Sbjct 61 LGSDMGEFYMPYPGTRINQETVSLDANGVSGSASYYEVKFSDPSKPNGQIWTGVIGSPAA 120
Query 249 NAPDAGPPQRWFVVWLGTANNPVDKGAAKALAESIRPLVAPPPAPAPAPAEPAPAPAPAG 308
NAPDAGPPQRWFVVWLGTANNPVDKGAAKALAESIRPLVAPPPAPAPAPAEPAPAPAPAG
Sbjct 121 NAPDAGPPQRWFVVWLGTANNPVDKGAAKALAESIRPLVAPPPAPAPAPAEPAPAPAPAG 180
Query 309 EVAPTPTTPTPQRTLPA 325
EVAPTPTTPTPQRTLPA
Sbjct 181 EVAPTPTTPTPQRTLPA 197
>gi|15828109|ref|NP_302372.1| cell surface protein (associated with virulence) [Mycobacterium
leprae TN]
gi|221230586|ref|YP_002504002.1| putative cell surface protein (associated with virulence) [Mycobacterium
leprae Br4923]
gi|13432182|sp|P46842.2|APA_MYCLE RecName: Full=Alanine and proline-rich secreted protein apa;
AltName: Full=Antigen 43L; AltName: Full=FAP-L; AltName: Full=Fibronectin
attachment protein; Flags: Precursor
gi|999262|gb|AAB34676.1| FAP-L=fibronectin attachment protein [Mycobacterium leprae, Peptide,
287 aa]
gi|13093663|emb|CAC31010.1| probable cell surface protein (associated with virulence) [Mycobacterium
leprae]
gi|219933693|emb|CAR72152.1| probable cell surface protein (associated with virulence) [Mycobacterium
leprae Br4923]
Length=287
Score = 333 bits (853), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 197/298 (67%), Positives = 218/298 (74%), Gaps = 14/298 (4%)
Query 1 MHQVDPNLTRRKGRLAALAIAAMASASLVTVAVPATANADPEPAPPVPTTAASPPSTAAA 60
M+QVD + T RKG A LAIA +ASAS T+ +PA ANA A PPSTA A
Sbjct 1 MNQVDLDSTHRKGLWAILAIAVVASASAFTMPLPAAANA---------DPAPLPPSTATA 51
Query 61 PPAPATPVAPPPPAAANTPNAQPGDPNAAPPPADPNAPPPPVIAPNAPQPVRIDNPVGGF 120
P+PA + P P A + AQPGDPNA P DPNAP P + PNA RI N VGGF
Sbjct 52 APSPAQEIITPLPGAPVSSEAQPGDPNA--PSLDPNAPYPLAVDPNAG---RITNAVGGF 106
Query 121 SFALPAGWVESDAAHFDYGSALLSKTTGDPPFPGQPPPVANDTRIVLGRLDQKLYASAEA 180
SF LPAGWVES+A+H DYGS LLSK PP GQP VA DTRIVLGRLDQKLYASAEA
Sbjct 107 SFVLPAGWVESEASHLDYGSVLLSKAIEQPPVLGQPTVVATDTRIVLGRLDQKLYASAEA 166
Query 181 TDSKAAARLGSDMGEFYMPYPGTRINQETVSLDANGVSGSASYYEVKFSDPSKPNGQIWT 240
+ KAA RLGSDMGEFY+PYPGTRINQET+ L ANG++GSASYYEVKFSDP+KP GQI T
Sbjct 167 DNIKAAVRLGSDMGEFYLPYPGTRINQETIPLHANGIAGSASYYEVKFSDPNKPIGQICT 226
Query 241 GVIGSPAANAPDAGPPQRWFVVWLGTANNPVDKGAAKALAESIRPLVAPPPAPAPAPA 298
V+GSPAA+ PD GP QRWFVVWLGT+NNPVDKGAAK LAESIR +AP PA APA
Sbjct 227 SVVGSPAASTPDVGPSQRWFVVWLGTSNNPVDKGAAKELAESIRSEMAPIPASVSAPA 284
>gi|240173548|ref|ZP_04752206.1| alanine and proline rich secreted protein Apa [Mycobacterium
kansasii ATCC 12478]
Length=244
Score = 323 bits (827), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 155/185 (84%), Positives = 167/185 (91%), Gaps = 0/185 (0%)
Query 101 PVIAPNAPQPVRIDNPVGGFSFALPAGWVESDAAHFDYGSALLSKTTGDPPFPGQPPPVA 160
PV PNAP+P RI N VGGFSF LP GWVESDA+H DYGSALLSK TG+PP PGQ PPVA
Sbjct 39 PVADPNAPEPARITNAVGGFSFILPPGWVESDASHLDYGSALLSKATGEPPMPGQAPPVA 98
Query 161 NDTRIVLGRLDQKLYASAEATDSKAAARLGSDMGEFYMPYPGTRINQETVSLDANGVSGS 220
NDTRIV+GRLDQ+LYASAE T+ KAA RLGSDMGEF+MPYPGTRINQETV L+ANGVSGS
Sbjct 99 NDTRIVMGRLDQRLYASAETTNPKAAVRLGSDMGEFFMPYPGTRINQETVPLNANGVSGS 158
Query 221 ASYYEVKFSDPSKPNGQIWTGVIGSPAANAPDAGPPQRWFVVWLGTANNPVDKGAAKALA 280
ASYYEVKFSDP+KPNGQIWTGVIG+PA P+AGPPQRWFVVWLGT+NNPVDKGAAKALA
Sbjct 159 ASYYEVKFSDPAKPNGQIWTGVIGTPAGTTPNAGPPQRWFVVWLGTSNNPVDKGAAKALA 218
Query 281 ESIRP 285
ESIRP
Sbjct 219 ESIRP 223
>gi|183982743|ref|YP_001851034.1| alanine and proline rich secreted protein Apa [Mycobacterium
marinum M]
gi|183176069|gb|ACC41179.1| alanine and proline rich secreted protein Apa [Mycobacterium
marinum M]
Length=334
Score = 310 bits (793), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 141/176 (81%), Positives = 161/176 (92%), Gaps = 0/176 (0%)
Query 109 QPVRIDNPVGGFSFALPAGWVESDAAHFDYGSALLSKTTGDPPFPGQPPPVANDTRIVLG 168
+P R++N VGGFSF +PAGWVESDA+H DYGSALLSK TG+PP PGQ PP+ANDTR+VLG
Sbjct 110 EPGRVNNAVGGFSFVVPAGWVESDASHLDYGSALLSKMTGEPPMPGQAPPIANDTRVVLG 169
Query 169 RLDQKLYASAEATDSKAAARLGSDMGEFYMPYPGTRINQETVSLDANGVSGSASYYEVKF 228
RLDQKLYASAEAT+ KAA RLGSDMGEF+MPYPGTRINQET+ L+ANG++GSASYYEVKF
Sbjct 170 RLDQKLYASAEATNPKAAVRLGSDMGEFFMPYPGTRINQETIPLNANGITGSASYYEVKF 229
Query 229 SDPSKPNGQIWTGVIGSPAANAPDAGPPQRWFVVWLGTANNPVDKGAAKALAESIR 284
SD SKPNGQIWTGV+G+PA + P+ GPPQRWFVVWLGT+N+PVDKGAAK LAESIR
Sbjct 230 SDESKPNGQIWTGVVGTPAGSTPNEGPPQRWFVVWLGTSNDPVDKGAAKVLAESIR 285
>gi|118618407|ref|YP_906739.1| alanine and proline rich secreted protein Apa [Mycobacterium
ulcerans Agy99]
gi|118570517|gb|ABL05268.1| alanine and proline rich secreted protein Apa [Mycobacterium
ulcerans Agy99]
Length=306
Score = 306 bits (785), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 140/176 (80%), Positives = 160/176 (91%), Gaps = 0/176 (0%)
Query 109 QPVRIDNPVGGFSFALPAGWVESDAAHFDYGSALLSKTTGDPPFPGQPPPVANDTRIVLG 168
+P R++N VGGFS +PAGWVESDA+H DYGSALLSK TG+PP PGQ PP+ANDTR+VLG
Sbjct 80 EPGRVNNAVGGFSSVVPAGWVESDASHLDYGSALLSKMTGEPPMPGQAPPIANDTRVVLG 139
Query 169 RLDQKLYASAEATDSKAAARLGSDMGEFYMPYPGTRINQETVSLDANGVSGSASYYEVKF 228
RLDQKLYASAEAT+ KAA RLGSDMGEF+MPYPGTRINQET+ L+ANG++GSASYYEVKF
Sbjct 140 RLDQKLYASAEATNPKAAVRLGSDMGEFFMPYPGTRINQETIPLNANGITGSASYYEVKF 199
Query 229 SDPSKPNGQIWTGVIGSPAANAPDAGPPQRWFVVWLGTANNPVDKGAAKALAESIR 284
SD SKPNGQIWTGV+G+PA + P+ GPPQRWFVVWLGT+N+PVDKGAAK LAESIR
Sbjct 200 SDESKPNGQIWTGVVGTPAGSTPNEGPPQRWFVVWLGTSNDPVDKGAAKVLAESIR 255
>gi|167970340|ref|ZP_02552617.1| alanine and proline rich secreted protein Apa [Mycobacterium
tuberculosis H37Ra]
Length=205
Score = 301 bits (770), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 144/145 (99%), Positives = 145/145 (100%), Gaps = 0/145 (0%)
Query 129 VESDAAHFDYGSALLSKTTGDPPFPGQPPPVANDTRIVLGRLDQKLYASAEATDSKAAAR 188
+ESDAAHFDYGSALLSKTTGDPPFPGQPPPVANDTRIVLGRLDQKLYASAEATDSKAAAR
Sbjct 1 MESDAAHFDYGSALLSKTTGDPPFPGQPPPVANDTRIVLGRLDQKLYASAEATDSKAAAR 60
Query 189 LGSDMGEFYMPYPGTRINQETVSLDANGVSGSASYYEVKFSDPSKPNGQIWTGVIGSPAA 248
LGSDMGEFYMPYPGTRINQETVSLDANGVSGSASYYEVKFSDPSKPNGQIWTGVIGSPAA
Sbjct 61 LGSDMGEFYMPYPGTRINQETVSLDANGVSGSASYYEVKFSDPSKPNGQIWTGVIGSPAA 120
Query 249 NAPDAGPPQRWFVVWLGTANNPVDK 273
NAPDAGPPQRWFVVWLGTANNPVDK
Sbjct 121 NAPDAGPPQRWFVVWLGTANNPVDK 145
>gi|342861243|ref|ZP_08717891.1| ModD protein [Mycobacterium colombiense CECT 3035]
gi|342131143|gb|EGT84424.1| ModD protein [Mycobacterium colombiense CECT 3035]
Length=351
Score = 284 bits (726), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 179/286 (63%), Positives = 198/286 (70%), Gaps = 7/286 (2%)
Query 1 MHQVDPNLTRRKGRLAALAIAAMASASLVTVAVPATANADPEPAPPVPTTAASPPSTAAA 60
M QVDP TRRKG LAI + AS V +A+PAT++ADPE PVP T A+ P A A
Sbjct 1 MEQVDPTSTRRKGLWTTLAITTVTGASAVAIALPATSSADPEVPTPVPPTTATAPPGAPA 60
Query 61 PPAPATPVAP-PPPAAANTPNAQPGDPNAAPPPADPNAPPPPVIAPNAPQPVRIDNPVGG 119
AP AP PA + P N P P P P P P RI N VGG
Sbjct 61 TNAPPAAQAPNGQPAPGDPNAVPPPPANPNGAPPPPVDPNAPPPPPADPNAGRITNAVGG 120
Query 120 FSFALPAGWVESDAAHFDYGSALLSKTTGDPPFPGQPPPVANDTRIVLGRLDQKLYASAE 179
FS+ LPAGWVESDA+H DYGSALLSK TG PP P QPP VANDTRIV+GRLDQKLYASAE
Sbjct 121 FSYVLPAGWVESDASHLDYGSALLSKVTGPPPMPDQPPAVANDTRIVMGRLDQKLYASAE 180
Query 180 ATDSKAAARLGSDMGEFYMPYPGTRINQETVSLD-ANGVSGSASYYEVKFSDPSKPNGQI 238
A + KAA RLGSDMGEF+MPYPGTRINQE L +NG +GSASYYEVKFSD SKPNGQI
Sbjct 181 ADNGKAAVRLGSDMGEFFMPYPGTRINQEATPLSGSNGSTGSASYYEVKFSDASKPNGQI 240
Query 239 WTGVIGSPAANAPDAGPPQRWFVVWLGTANNPVDKGAAKALAESIR 284
WTGVIGS + G QRWFVVWLGT+N+PVD+GAAKAL ESI+
Sbjct 241 WTGVIGS-----ANGGTAQRWFVVWLGTSNDPVDRGAAKALTESIQ 281
>gi|296165976|ref|ZP_06848433.1| fibronectin attachment protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295898670|gb|EFG78219.1| fibronectin attachment protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=215
Score = 276 bits (705), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 141/175 (81%), Positives = 155/175 (89%), Gaps = 3/175 (1%)
Query 112 RIDNPVGGFSFALPAGWVESDAAHFDYGSALLSKTTGDPPFPGQPPPVANDTRIVLGRLD 171
R+ N VGGFS+ LP GWVESDA+H DYGSALLSKTTG PP P QPPPVANDTRIV+GRLD
Sbjct 29 RVANAVGGFSYVLPPGWVESDASHLDYGSALLSKTTGPPPLPDQPPPVANDTRIVMGRLD 88
Query 172 QKLYASAEATDSKAAARLGSDMGEFYMPYPGTRINQETVSL-DANGVSGSASYYEVKFSD 230
QKLYASAEA ++KAA RLGSDMGEF++PYPGTRINQE+ L ANG++GSASYYEVKFSD
Sbjct 89 QKLYASAEANNAKAAVRLGSDMGEFFLPYPGTRINQESTPLTGANGITGSASYYEVKFSD 148
Query 231 PSKPNGQIWTGVIGSPAANAPDAGPPQRWFVVWLGTANNPVDKGAAKALAESIRP 285
SKPNGQIWTGV+G PAAN GPPQRWFVVWLGTAN+PVDKGAAKALAESI+P
Sbjct 149 ASKPNGQIWTGVVGLPAANT--GGPPQRWFVVWLGTANDPVDKGAAKALAESIQP 201
>gi|333990588|ref|YP_004523202.1| alanine and proline rich secreted protein apa [Mycobacterium
sp. JDM601]
gi|333486556|gb|AEF35948.1| alanine and proline rich secreted protein apa [Mycobacterium
sp. JDM601]
Length=313
Score = 274 bits (701), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 125/182 (69%), Positives = 148/182 (82%), Gaps = 0/182 (0%)
Query 105 PNAPQPVRIDNPVGGFSFALPAGWVESDAAHFDYGSALLSKTTGDPPFPGQPPPVANDTR 164
P AP+ R+D+ GGFS+ LP GWV+SD +H +YGS+LLSK TG+P PGQP PVANDTR
Sbjct 76 PGAPEAGRVDDVAGGFSYVLPGGWVQSDTSHLEYGSSLLSKQTGEPMLPGQPAPVANDTR 135
Query 165 IVLGRLDQKLYASAEATDSKAAARLGSDMGEFYMPYPGTRINQETVSLDANGVSGSASYY 224
IVLG+LDQ+LYASAE ++KAA RLGSDMGEF+MPYPGTR NQE+ L G++GSASYY
Sbjct 136 IVLGKLDQRLYASAETDNAKAATRLGSDMGEFFMPYPGTRANQESTQLAGGGLTGSASYY 195
Query 225 EVKFSDPSKPNGQIWTGVIGSPAANAPDAGPPQRWFVVWLGTANNPVDKGAAKALAESIR 284
EVKF+DP+KP GQIW+GVIG P A+ +RWFVVWLGTANNPVD+ AAKAL ESIR
Sbjct 196 EVKFTDPAKPVGQIWSGVIGVPPADGGTGAQTERWFVVWLGTANNPVDREAAKALTESIR 255
Query 285 PL 286
PL
Sbjct 256 PL 257
>gi|254822051|ref|ZP_05227052.1| ModD protein [Mycobacterium intracellulare ATCC 13950]
Length=248
Score = 267 bits (682), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 151/220 (69%), Positives = 166/220 (76%), Gaps = 23/220 (10%)
Query 83 PGDPNAAPPPADPNAPPPPVIAPNAPQPV-----------------RIDNPVGGFSFALP 125
PGDPNA PP PN PPP + PNAP P RI+N VGGFS+ LP
Sbjct 1 PGDPNAVPPAVAPNGAPPPPVDPNAPPPPPVDPNAPPPPPVDPNAGRINNAVGGFSYVLP 60
Query 126 AGWVESDAAHFDYGSALLSKTTGDPPFPGQPPPVANDTRIVLGRLDQKLYASAEATDSKA 185
AGWVESDA+H DYGSALLSK TG PP P QPP VANDTRIV+GRLDQKLYASAEA ++KA
Sbjct 61 AGWVESDASHLDYGSALLSKVTGPPPMPDQPPQVANDTRIVMGRLDQKLYASAEADNAKA 120
Query 186 AARLGSDMGEFYMPYPGTRINQETVSL-DANGVSGSASYYEVKFSDPSKPNGQIWTGVIG 244
A RLGSDMGEF+MPYPGTRINQE+ L ANG +GS SYYEVKFSD SKPNGQIWTGVIG
Sbjct 121 AVRLGSDMGEFFMPYPGTRINQESTPLAGANGSTGSGSYYEVKFSDASKPNGQIWTGVIG 180
Query 245 SPAANAPDAGPPQRWFVVWLGTANNPVDKGAAKALAESIR 284
S + G QRWFVVWLGT+N+PVD+GAAKAL ESI+
Sbjct 181 S-----ANGGNAQRWFVVWLGTSNDPVDRGAAKALTESIQ 215
>gi|336457617|gb|EGO36622.1| Fibronectin-attachment protein (FAP) [Mycobacterium avium subsp.
paratuberculosis S397]
Length=368
Score = 266 bits (679), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 135/174 (78%), Positives = 149/174 (86%), Gaps = 6/174 (3%)
Query 112 RIDNPVGGFSFALPAGWVESDAAHFDYGSALLSKTTGDPPFPGQPPPVANDTRIVLGRLD 171
RI N VGGFS+ LPAGWVESDA+H DYGSALLSK TG PP P QPPPVANDTRIV+GRLD
Sbjct 127 RIPNAVGGFSYVLPAGWVESDASHLDYGSALLSKVTGPPPMPDQPPPVANDTRIVMGRLD 186
Query 172 QKLYASAEATDSKAAARLGSDMGEFYMPYPGTRINQETVSLD-ANGVSGSASYYEVKFSD 230
QKLYASAEA ++KAA RLGSDMGEF+MPYPGTRINQ++ L+ ANG +GSASYYEVKFSD
Sbjct 187 QKLYASAEANNAKAAVRLGSDMGEFFMPYPGTRINQDSTPLNGANGSTGSASYYEVKFSD 246
Query 231 PSKPNGQIWTGVIGSPAANAPDAGPPQRWFVVWLGTANNPVDKGAAKALAESIR 284
SKPNGQIWTGVIGS + G QRWFVVWLGT+N+PVDK AAKALAESI+
Sbjct 247 ASKPNGQIWTGVIGS-----ANGGNAQRWFVVWLGTSNDPVDKVAAKALAESIQ 295
>gi|118464964|ref|YP_882045.1| ModD protein [Mycobacterium avium 104]
gi|118166251|gb|ABK67148.1| ModD protein [Mycobacterium avium 104]
Length=385
Score = 265 bits (678), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 135/174 (78%), Positives = 149/174 (86%), Gaps = 6/174 (3%)
Query 112 RIDNPVGGFSFALPAGWVESDAAHFDYGSALLSKTTGDPPFPGQPPPVANDTRIVLGRLD 171
RI N VGGFS+ LPAGWVESDA+H DYGSALLSK TG PP P QPPPVANDTRIV+GRLD
Sbjct 135 RIPNAVGGFSYVLPAGWVESDASHLDYGSALLSKVTGPPPMPDQPPPVANDTRIVMGRLD 194
Query 172 QKLYASAEATDSKAAARLGSDMGEFYMPYPGTRINQETVSLD-ANGVSGSASYYEVKFSD 230
QKLYASAEA ++KAA RLGSDMGEF+MPYPGTRINQ++ L+ ANG +GSASYYEVKFSD
Sbjct 195 QKLYASAEANNAKAAVRLGSDMGEFFMPYPGTRINQDSTPLNGANGSTGSASYYEVKFSD 254
Query 231 PSKPNGQIWTGVIGSPAANAPDAGPPQRWFVVWLGTANNPVDKGAAKALAESIR 284
SKPNGQIWTGVIGS + G QRWFVVWLGT+N+PVDK AAKALAESI+
Sbjct 255 ASKPNGQIWTGVIGS-----ANGGNAQRWFVVWLGTSNDPVDKVAAKALAESIQ 303
>gi|41407667|ref|NP_960503.1| ModD [Mycobacterium avium subsp. paratuberculosis K-10]
gi|13375561|gb|AAK20394.1|AF334165_1 fibronectin-binding protein P [Mycobacterium avium subsp. paratuberculosis]
gi|10719741|gb|AAG22111.1| fibronectin-attachment protein FAP-P [Mycobacterium avium subsp.
paratuberculosis]
gi|41396020|gb|AAS03886.1| ModD [Mycobacterium avium subsp. paratuberculosis K-10]
Length=368
Score = 265 bits (678), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 135/174 (78%), Positives = 149/174 (86%), Gaps = 6/174 (3%)
Query 112 RIDNPVGGFSFALPAGWVESDAAHFDYGSALLSKTTGDPPFPGQPPPVANDTRIVLGRLD 171
RI N VGGFS+ LPAGWVESDA+H DYGSALLSK TG PP P QPPPVANDTRIV+GRLD
Sbjct 127 RIPNAVGGFSYVLPAGWVESDASHLDYGSALLSKVTGPPPMPDQPPPVANDTRIVMGRLD 186
Query 172 QKLYASAEATDSKAAARLGSDMGEFYMPYPGTRINQETVSLD-ANGVSGSASYYEVKFSD 230
QKLYASAEA ++KAA RLGSDMGEF+MPYPGTRINQ++ L+ ANG +GSASYYEVKFSD
Sbjct 187 QKLYASAEANNAKAAVRLGSDMGEFFMPYPGTRINQDSTPLNGANGSTGSASYYEVKFSD 246
Query 231 PSKPNGQIWTGVIGSPAANAPDAGPPQRWFVVWLGTANNPVDKGAAKALAESIR 284
SKPNGQIWTGVIGS + G QRWFVVWLGT+N+PVDK AAKALAESI+
Sbjct 247 ASKPNGQIWTGVIGS-----ANGGNAQRWFVVWLGTSNDPVDKVAAKALAESIQ 295
>gi|82395167|gb|ABB72055.1| ModD [Mycobacterium avium subsp. paratuberculosis]
Length=362
Score = 265 bits (678), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 135/174 (78%), Positives = 149/174 (86%), Gaps = 6/174 (3%)
Query 112 RIDNPVGGFSFALPAGWVESDAAHFDYGSALLSKTTGDPPFPGQPPPVANDTRIVLGRLD 171
RI N VGGFS+ LPAGWVESDA+H DYGSALLSK TG PP P QPPPVANDTRIV+GRLD
Sbjct 121 RIPNAVGGFSYVLPAGWVESDASHLDYGSALLSKVTGPPPMPDQPPPVANDTRIVMGRLD 180
Query 172 QKLYASAEATDSKAAARLGSDMGEFYMPYPGTRINQETVSLD-ANGVSGSASYYEVKFSD 230
QKLYASAEA ++KAA RLGSDMGEF+MPYPGTRINQ++ L+ ANG +GSASYYEVKFSD
Sbjct 181 QKLYASAEANNAKAAVRLGSDMGEFFMPYPGTRINQDSTPLNGANGSTGSASYYEVKFSD 240
Query 231 PSKPNGQIWTGVIGSPAANAPDAGPPQRWFVVWLGTANNPVDKGAAKALAESIR 284
SKPNGQIWTGVIGS + G QRWFVVWLGT+N+PVDK AAKALAESI+
Sbjct 241 ASKPNGQIWTGVIGS-----ANGGNAQRWFVVWLGTSNDPVDKVAAKALAESIQ 289
>gi|254775335|ref|ZP_05216851.1| ModD protein [Mycobacterium avium subsp. avium ATCC 25291]
Length=322
Score = 265 bits (676), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 135/174 (78%), Positives = 149/174 (86%), Gaps = 6/174 (3%)
Query 112 RIDNPVGGFSFALPAGWVESDAAHFDYGSALLSKTTGDPPFPGQPPPVANDTRIVLGRLD 171
RI N VGGFS+ LPAGWVESDA+H DYGSALLSK TG PP P QPPPVANDTRIV+GRLD
Sbjct 135 RIPNAVGGFSYVLPAGWVESDASHLDYGSALLSKVTGPPPMPDQPPPVANDTRIVMGRLD 194
Query 172 QKLYASAEATDSKAAARLGSDMGEFYMPYPGTRINQETVSLD-ANGVSGSASYYEVKFSD 230
QKLYASAEA ++KAA RLGSDMGEF+MPYPGTRINQ++ L+ ANG +GSASYYEVKFSD
Sbjct 195 QKLYASAEANNAKAAVRLGSDMGEFFMPYPGTRINQDSTPLNGANGSTGSASYYEVKFSD 254
Query 231 PSKPNGQIWTGVIGSPAANAPDAGPPQRWFVVWLGTANNPVDKGAAKALAESIR 284
SKPNGQIWTGVIGS + G QRWFVVWLGT+N+PVDK AAKALAESI+
Sbjct 255 ASKPNGQIWTGVIGS-----ANGGNAQRWFVVWLGTSNDPVDKVAAKALAESIQ 303
>gi|7387896|sp|Q48919.1|APA_MYCAV RecName: Full=Alanine and proline-rich secreted protein apa;
AltName: Full=45/47 kDa antigen; AltName: Full=FAP-A; AltName:
Full=Fibronectin attachment protein; Flags: Precursor
gi|1469545|gb|AAB50543.1| fibronectin attachment protein [Mycobacterium avium]
Length=381
Score = 246 bits (627), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 127/165 (77%), Positives = 142/165 (87%), Gaps = 6/165 (3%)
Query 121 SFALPAGWVESDAAHFDYGSALLSKTTGDPPFPGQPPPVANDTRIVLGRLDQKLYASAEA 180
S+ LPAGWVESDA+H DYGSALLSK TG PP P QPPPVANDTRIV+GR+DQKLYASAEA
Sbjct 140 SYVLPAGWVESDASHLDYGSALLSKVTGPPPMPDQPPPVANDTRIVMGRVDQKLYASAEA 199
Query 181 TDSKAAARLGSDMGEFYMPYPGTRINQETVSLD-ANGVSGSASYYEVKFSDPSKPNGQIW 239
++KAA LGSDMGEF+MPYPGTRINQ++ L+ ANG +GSASYYEVKFSD SKPNGQIW
Sbjct 200 NNAKAAVGLGSDMGEFFMPYPGTRINQDSTPLNGANGSTGSASYYEVKFSDASKPNGQIW 259
Query 240 TGVIGSPAANAPDAGPPQRWFVVWLGTANNPVDKGAAKALAESIR 284
TGVIGS +AG QRWFVVWLGT+N+PVDK AAKALAESI+
Sbjct 260 TGVIGS-----ANAGNRQRWFVVWLGTSNDPVDKVAAKALAESIQ 299
>gi|118469719|ref|YP_887921.1| alanine and proline-rich hypothetical protein apa [Mycobacterium
smegmatis str. MC2 155]
gi|118171006|gb|ABK71902.1| alanine and proline-rich secreted protein apa [Mycobacterium
smegmatis str. MC2 155]
Length=353
Score = 216 bits (551), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 107/176 (61%), Positives = 129/176 (74%), Gaps = 8/176 (4%)
Query 112 RIDNPVGGFSFALPAGWVESDAAHFDYGSALLSKTTGDPPFPGQPPPVANDTRIVLGRLD 171
R+DN GGFS+ +P GW SDA YG ALL+KT + G PP NDT ++LGRLD
Sbjct 132 RVDNAAGGFSYVVPEGWQVSDATQLSYGQALLTKTVAE----GAEPP--NDTSVLLGRLD 185
Query 172 QKLYASAEATDSKAAARLGSDMGEFYMPYPGTRINQETVSLDANGVSGSASYYEVKFSDP 231
KL+A AE ++KAA RL SDMGEF+MP+PGTR+NQ+TV L+A+G+ G ASYYEVKF+D
Sbjct 186 LKLFAGAEPDNNKAAVRLASDMGEFFMPFPGTRVNQQTVQLNADGMPGVASYYEVKFTDA 245
Query 232 SKPNGQIWTGVIGSPAANAPDAGP--PQRWFVVWLGTANNPVDKGAAKALAESIRP 285
+KP GQIW GV+G P A G P+RWFVVWLGTANNP+DK AA ALA SIRP
Sbjct 246 NKPAGQIWAGVVGQPVAPGTPRGQRTPERWFVVWLGTANNPIDKDAAVALANSIRP 301
>gi|315444263|ref|YP_004077142.1| Fibronectin-attachment protein (FAP) [Mycobacterium sp. Spyr1]
gi|315262566|gb|ADT99307.1| Fibronectin-attachment protein (FAP) [Mycobacterium sp. Spyr1]
Length=355
Score = 215 bits (547), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 109/177 (62%), Positives = 129/177 (73%), Gaps = 8/177 (4%)
Query 112 RIDNPVGGFSFALPAGWVESDAAHFDYGSALLSKT--TGDPPFPGQPPPVANDTRIVLGR 169
R+DN GGFS+ +PAGW SDA YG ALLSK G PP QPP NDT ++LGR
Sbjct 128 RVDNAAGGFSYVVPAGWKVSDATQLSYGQALLSKLPPEGSPP-DAQPP---NDTSVLLGR 183
Query 170 LDQKLYASAEATDSKAAARLGSDMGEFYMPYPGTRINQETVSLDANGVSGSASYYEVKFS 229
LD KL+A AE ++KAA RL SDMGEF+MP+PGTR+NQ+ V LDANG++G ASYYEVKF+
Sbjct 184 LDLKLFAGAETDNTKAAQRLASDMGEFFMPFPGTRVNQQVVPLDANGMTGVASYYEVKFT 243
Query 230 DPSKPNGQIWTGVIGSPAANAPDAGP--PQRWFVVWLGTANNPVDKGAAKALAESIR 284
D +KPNGQIW GV+G+P A G P+RWFVVWLGTA NPV +G A LA SIR
Sbjct 244 DTNKPNGQIWAGVVGAPVAPGTPRGQRTPERWFVVWLGTATNPVPQGEAVTLANSIR 300
>gi|145223931|ref|YP_001134609.1| fibronectin-attachment family protein [Mycobacterium gilvum PYR-GCK]
gi|145216417|gb|ABP45821.1| Fibronectin-attachment family protein [Mycobacterium gilvum PYR-GCK]
Length=355
Score = 215 bits (547), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 109/177 (62%), Positives = 129/177 (73%), Gaps = 8/177 (4%)
Query 112 RIDNPVGGFSFALPAGWVESDAAHFDYGSALLSKT--TGDPPFPGQPPPVANDTRIVLGR 169
R+DN GGFS+ +PAGW SDA YG ALLSK G PP QPP NDT ++LGR
Sbjct 128 RVDNAAGGFSYVVPAGWKVSDATQLSYGQALLSKLPPEGSPP-DAQPP---NDTSVLLGR 183
Query 170 LDQKLYASAEATDSKAAARLGSDMGEFYMPYPGTRINQETVSLDANGVSGSASYYEVKFS 229
LD KL+A AE ++KAA RL SDMGEF+MP+PGTR+NQ+ V LDANG++G ASYYEVKF+
Sbjct 184 LDLKLFAGAETDNTKAAQRLASDMGEFFMPFPGTRVNQQVVPLDANGMTGVASYYEVKFT 243
Query 230 DPSKPNGQIWTGVIGSPAANAPDAGP--PQRWFVVWLGTANNPVDKGAAKALAESIR 284
D +KPNGQIW GV+G+P A G P+RWFVVWLGTA NPV +G A LA SIR
Sbjct 244 DTNKPNGQIWAGVVGAPVAPGTPRGQRTPERWFVVWLGTATNPVPQGEAVTLANSIR 300
>gi|126435403|ref|YP_001071094.1| fibronectin-attachment family protein [Mycobacterium sp. JLS]
gi|126235203|gb|ABN98603.1| Fibronectin-attachment family protein [Mycobacterium sp. JLS]
Length=333
Score = 209 bits (532), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 105/178 (59%), Positives = 128/178 (72%), Gaps = 7/178 (3%)
Query 109 QPVRIDNPVGGFSFALPAGWVESDAAHFDYGSALLSKTTGDPPFPGQPPPVANDTRIVLG 168
+P R+DN GGFS+ +P GW SDA + YG ALL++ PP PP NDT ++LG
Sbjct 108 EPGRVDNAAGGFSYVVPGGWKVSDATNLSYGQALLTRI---PPEGVTNPP--NDTSVLLG 162
Query 169 RLDQKLYASAEATDSKAAARLGSDMGEFYMPYPGTRINQETVSLDANGVSGSASYYEVKF 228
RLD KL+A AE ++KAA RL SDMGEF+MP+PGTR+NQ T LDANG+ G ASYYEVKF
Sbjct 163 RLDLKLFAGAETDNTKAANRLASDMGEFFMPFPGTRVNQSTTPLDANGMPGVASYYEVKF 222
Query 229 SDPSKPNGQIWTGVIGSPAANAPDAGP--PQRWFVVWLGTANNPVDKGAAKALAESIR 284
+D +KPNGQIW GV+G+P A G P+RWFVVWLG+A NPVD+ AA LA SIR
Sbjct 223 TDTNKPNGQIWAGVVGNPVAPGTPRGQRTPERWFVVWLGSATNPVDREAAVTLANSIR 280
>gi|108799762|ref|YP_639959.1| fibronectin-attachment [Mycobacterium sp. MCS]
gi|119868872|ref|YP_938824.1| fibronectin-attachment family protein [Mycobacterium sp. KMS]
gi|108770181|gb|ABG08903.1| Fibronectin-attachment [Mycobacterium sp. MCS]
gi|119694961|gb|ABL92034.1| Fibronectin-attachment family protein [Mycobacterium sp. KMS]
Length=333
Score = 209 bits (532), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 105/178 (59%), Positives = 128/178 (72%), Gaps = 7/178 (3%)
Query 109 QPVRIDNPVGGFSFALPAGWVESDAAHFDYGSALLSKTTGDPPFPGQPPPVANDTRIVLG 168
+P R+DN GGFS+ +P GW SDA + YG ALL++ PP PP NDT ++LG
Sbjct 108 EPGRVDNAAGGFSYVVPGGWKVSDATNLSYGQALLTRI---PPEGVTNPP--NDTSVLLG 162
Query 169 RLDQKLYASAEATDSKAAARLGSDMGEFYMPYPGTRINQETVSLDANGVSGSASYYEVKF 228
RLD KL+A AE ++KAA RL SDMGEF+MP+PGTR+NQ T LDANG+ G ASYYEVKF
Sbjct 163 RLDLKLFAGAETDNTKAANRLASDMGEFFMPFPGTRVNQSTTPLDANGMPGVASYYEVKF 222
Query 229 SDPSKPNGQIWTGVIGSPAANAPDAGP--PQRWFVVWLGTANNPVDKGAAKALAESIR 284
+D +KPNGQIW GV+G+P A G P+RWFVVWLG+A NPVD+ AA LA SIR
Sbjct 223 TDTNKPNGQIWAGVVGNPVAPGTPRGQRTPERWFVVWLGSATNPVDREAAVTLANSIR 280
>gi|120404054|ref|YP_953883.1| fibronectin-attachment family protein [Mycobacterium vanbaalenii
PYR-1]
gi|119956872|gb|ABM13877.1| Fibronectin-attachment family protein [Mycobacterium vanbaalenii
PYR-1]
Length=338
Score = 201 bits (512), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 105/177 (60%), Positives = 124/177 (71%), Gaps = 11/177 (6%)
Query 112 RIDNPVGGFSFALPAGWVESDAAHFDYGSALLSKT--TGDPPFPGQPPPVANDTRIVLGR 169
RIDN GGFS+ +PAGW SD+ YG ALL+K G PP QPP NDT ++LGR
Sbjct 113 RIDNAAGGFSYVVPAGWEVSDSTQLSYGQALLTKLPPEGAPP-DAQPP---NDTSVLLGR 168
Query 170 LDQKLYASAEATDSKAAARLGSDMGEFYMPYPGTRINQETVSLDANGVSGSASYYEVKFS 229
LD KL+A AE ++KAA RL SDMGEF+MP+PGTR+NQ+ V LD NGV ASYYEVKF+
Sbjct 169 LDLKLFAGAENDNTKAAQRLASDMGEFFMPFPGTRVNQQVVPLDNNGV---ASYYEVKFT 225
Query 230 DPSKPNGQIWTGVIGSPAANAPDAGP--PQRWFVVWLGTANNPVDKGAAKALAESIR 284
D +KPNGQIW GV+G P A G P+RWFVVWLGTA NP+ + A LA SIR
Sbjct 226 DTNKPNGQIWAGVVGEPVAPGTPRGQRTPERWFVVWLGTATNPIPQAEAVTLANSIR 282
>gi|18092163|gb|AAL59141.1|AF395912_1 fibronectin-attachment mutant protein [Mycobacterium avium subsp.
paratuberculosis]
Length=194
Score = 197 bits (502), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 95/124 (77%), Positives = 107/124 (87%), Gaps = 6/124 (4%)
Query 162 DTRIVLGRLDQKLYASAEATDSKAAARLGSDMGEFYMPYPGTRINQETVSLD-ANGVSGS 220
DTRIV+GRLDQKLYASAEA ++KAA RLGSDMGEF+MPYPGTRINQ++ L+ ANG +GS
Sbjct 1 DTRIVMGRLDQKLYASAEANNAKAAVRLGSDMGEFFMPYPGTRINQDSTPLNGANGSTGS 60
Query 221 ASYYEVKFSDPSKPNGQIWTGVIGSPAANAPDAGPPQRWFVVWLGTANNPVDKGAAKALA 280
ASYYEVKFSD SKPNGQIWTGVIGS + G QRWFVVWLGT+N+PVDK AAKALA
Sbjct 61 ASYYEVKFSDASKPNGQIWTGVIGS-----ANGGNAQRWFVVWLGTSNDPVDKVAAKALA 115
Query 281 ESIR 284
ESI+
Sbjct 116 ESIQ 119
>gi|169629522|ref|YP_001703171.1| hypothetical protein MAB_2436 [Mycobacterium abscessus ATCC 19977]
gi|169241489|emb|CAM62517.1| Conserved hypothetical protein (fibronectin-attachment?) [Mycobacterium
abscessus]
Length=344
Score = 143 bits (361), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 83/188 (45%), Positives = 99/188 (53%), Gaps = 51/188 (27%)
Query 112 RIDNPVGGFSFALPAGWVESDAAHFDYGSALLSKTTGDPPFPGQPPPVANDTRIVLGRLD 171
R++N GGFSF +P GWV+SDA YGSALL+ P A + I+LGRLD
Sbjct 114 RVNNDQGGFSFVVPQGWVQSDARRLTYGSALLTN------------PAAPNGSILLGRLD 161
Query 172 QKLYASAEATDSKAAARLGSDMGEFYMPYPGTRINQETVSLDANGVSGSASYYEVKFSDP 231
KL+A AE + KAA RL SDMGEF+MPYPG R+NQE S D G+S ++SYYEVKF D
Sbjct 162 LKLFAGAEPDNQKAARRLASDMGEFFMPYPGNRVNQEDQSFDVAGMSAASSYYEVKFDDA 221
Query 232 SKPNGQIWTGVIG---------------SPAANAPDAGPPQRWFVVWLGTANNPVDKGAA 276
+K GQIW +G SP KG A
Sbjct 222 AKEPGQIWAAAVGKGKDRWFIVWLGTAASPVD------------------------KGVA 257
Query 277 KALAESIR 284
KAL ESIR
Sbjct 258 KALTESIR 265
>gi|2578369|emb|CAA15433.1| antigen 43L [Mycobacterium leprae]
Length=85
Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 48/96 (50%), Positives = 56/96 (59%), Gaps = 11/96 (11%)
Query 1 MHQVDPNLTRRKGRLAALAIAAMASASLVTVAVPATANADPEPAPPVPTTAASPPSTAAA 60
M+QVD + T RKG A LAIA +ASAS T+ +PA ANA A PPSTA A
Sbjct 1 MNQVDLDSTHRKGLWAILAIAVVASASAFTMPLPAAANA---------DPAPLPPSTATA 51
Query 61 PPAPATPVAPPPPAAANTPNAQPGDPNAAPPPADPN 96
P+PA + P P A + AQPGDPNA P DPN
Sbjct 52 APSPAQEIITPLPGAPVSSEAQPGDPNA--PSLDPN 85
Lambda K H
0.310 0.129 0.398
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 577149478596
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40