BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv1866 Length=778 Score E Sequences producing significant alignments: (Bits) Value gi|289443343|ref|ZP_06433087.1| conserved hypothetical protein [... 1568 0.0 gi|345462003|ref|NP_216382.2| hypothetical protein Rv1866 [Mycob... 1567 0.0 gi|148823077|ref|YP_001287831.1| hypothetical protein TBFG_11894... 1567 0.0 gi|148661672|ref|YP_001283195.1| hypothetical protein MRA_1877 [... 1567 0.0 gi|31793056|ref|NP_855549.1| hypothetical protein Mb1897 [Mycoba... 1567 0.0 gi|289574548|ref|ZP_06454775.1| conserved hypothetical protein [... 1565 0.0 gi|323719607|gb|EGB28730.1| hypothetical protein TMMG_01123 [Myc... 1565 0.0 gi|15841335|ref|NP_336372.1| hypothetical protein MT1915 [Mycoba... 1565 0.0 gi|254232044|ref|ZP_04925371.1| conserved hypothetical protein [... 1563 0.0 gi|183982751|ref|YP_001851042.1| acyl-CoA transferase/dehydratas... 1260 0.0 gi|240170501|ref|ZP_04749160.1| acyl-CoA transferase/dehydratase... 1201 0.0 gi|296164864|ref|ZP_06847420.1| caib/baif family protein [Mycoba... 1179 0.0 gi|336457513|gb|EGO36519.1| putative acyl-CoA transferase/carnit... 1169 0.0 gi|254775328|ref|ZP_05216844.1| caib/baif family protein [Mycoba... 1168 0.0 gi|41407674|ref|NP_960510.1| hypothetical protein MAP1576 [Mycob... 1167 0.0 gi|118467261|ref|YP_882038.1| caib/baif family protein [Mycobact... 1165 0.0 gi|254819326|ref|ZP_05224327.1| caib/baif family protein [Mycoba... 1164 0.0 gi|342861235|ref|ZP_08717883.1| hypothetical protein MCOL_20226 ... 1152 0.0 gi|333990594|ref|YP_004523208.1| acyl-CoA transferase/dehydratas... 991 0.0 gi|226361197|ref|YP_002778975.1| hypothetical protein ROP_17830 ... 667 0.0 gi|111017416|ref|YP_700388.1| formyl-coenzyme A transferase [Rho... 651 0.0 gi|288923821|ref|ZP_06417908.1| L-carnitine dehydratase/bile aci... 645 0.0 gi|298525358|ref|ZP_07012767.1| conserved hypothetical protein [... 606 4e-171 gi|312197205|ref|YP_004017266.1| L-carnitine dehydratase/bile ac... 602 7e-170 gi|111223283|ref|YP_714077.1| acyl-CoA transferases/carnitine de... 568 1e-159 gi|254284362|ref|ZP_04959330.1| caib/baif family protein [gamma ... 556 4e-156 gi|333992483|ref|YP_004525097.1| acyl-CoA transferase/dehydratas... 551 1e-154 gi|111224154|ref|YP_714948.1| putative Formyl-CoA transferase [F... 536 4e-150 gi|254480250|ref|ZP_05093498.1| CAIB/BAIF family protein [marine... 534 3e-149 gi|118472187|ref|YP_886269.1| caib/baif family protein [Mycobact... 482 8e-134 gi|145222921|ref|YP_001133599.1| L-carnitine dehydratase/bile ac... 478 3e-132 gi|126438219|ref|YP_001073910.1| L-carnitine dehydratase/bile ac... 474 2e-131 gi|108802237|ref|YP_642434.1| L-carnitine dehydratase/bile acid-... 473 4e-131 gi|296283480|ref|ZP_06861478.1| acyl-CoA transferases/carnitine ... 468 2e-129 gi|120405268|ref|YP_955097.1| L-carnitine dehydratase/bile acid-... 466 5e-129 gi|315443384|ref|YP_004076263.1| acyl-CoA transferase/carnitine ... 464 2e-128 gi|302528387|ref|ZP_07280729.1| L-carnitine dehydratase/bile aci... 402 9e-110 gi|91976060|ref|YP_568719.1| L-carnitine dehydratase/bile acid-i... 281 2e-73 gi|325673110|ref|ZP_08152804.1| L-carnitine dehydratase/bile aci... 280 8e-73 gi|312141632|ref|YP_004008968.1| CoA-transferase family iii [Rho... 276 8e-72 gi|86748700|ref|YP_485196.1| L-carnitine dehydratase/bile acid-i... 273 7e-71 gi|240171018|ref|ZP_04749677.1| acyl-CoA transferase [Mycobacter... 256 2e-65 gi|338975454|ref|ZP_08630806.1| hypothetical protein CSIRO_3916 ... 250 7e-64 gi|312196315|ref|YP_004016376.1| L-carnitine dehydratase/bile ac... 249 1e-63 gi|254823157|ref|ZP_05228158.1| caib/baif family protein [Mycoba... 249 1e-63 gi|342857925|ref|ZP_08714581.1| caib/baif family protein [Mycoba... 237 6e-60 gi|183983946|ref|YP_001852237.1| acyl-CoA transferase [Mycobacte... 237 6e-60 gi|342857420|ref|ZP_08714076.1| CoA-transferase [Mycobacterium c... 236 2e-59 gi|73537727|ref|YP_298094.1| L-carnitine dehydratase/bile acid-i... 234 4e-59 gi|345011829|ref|YP_004814183.1| L-carnitine dehydratase/bile ac... 234 6e-59 >gi|289443343|ref|ZP_06433087.1| conserved hypothetical protein [Mycobacterium tuberculosis T46] gi|289447480|ref|ZP_06437224.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A] gi|289569943|ref|ZP_06450170.1| conserved hypothetical protein [Mycobacterium tuberculosis T17] 16 more sequence titles Length=778 Score = 1568 bits (4059), Expect = 0.0, Method: Compositional matrix adjust. Identities = 778/778 (100%), Positives = 778/778 (100%), Gaps = 0/778 (0%) Query 1 MVTRLLADLGADVLKVEPPGGSPGRHVRPTLAGTSIGFAMHNANKRSAVLNPLDESDRRR 60 MVTRLLADLGADVLKVEPPGGSPGRHVRPTLAGTSIGFAMHNANKRSAVLNPLDESDRRR Sbjct 1 MVTRLLADLGADVLKVEPPGGSPGRHVRPTLAGTSIGFAMHNANKRSAVLNPLDESDRRR 60 Query 61 FLDLAASADIVVDCGLPGQAAAYGASCAELADRYRHLVALSITDFGAAGPRSSWRATDPV 120 FLDLAASADIVVDCGLPGQAAAYGASCAELADRYRHLVALSITDFGAAGPRSSWRATDPV Sbjct 61 FLDLAASADIVVDCGLPGQAAAYGASCAELADRYRHLVALSITDFGAAGPRSSWRATDPV 120 Query 121 LYAMSGALSRSGPTAGTPVLPPDGIASATAAVQAAWAVLVAYFNRLRCGTGDYIDFSRFD 180 LYAMSGALSRSGPTAGTPVLPPDGIASATAAVQAAWAVLVAYFNRLRCGTGDYIDFSRFD Sbjct 121 LYAMSGALSRSGPTAGTPVLPPDGIASATAAVQAAWAVLVAYFNRLRCGTGDYIDFSRFD 180 Query 181 AVVMALDPPFGAHGQVAAGIRSTGRWRGRPKNQDAYPIYPCRDGYVRFCVMAPRQWRGLR 240 AVVMALDPPFGAHGQVAAGIRSTGRWRGRPKNQDAYPIYPCRDGYVRFCVMAPRQWRGLR Sbjct 181 AVVMALDPPFGAHGQVAAGIRSTGRWRGRPKNQDAYPIYPCRDGYVRFCVMAPRQWRGLR 240 Query 241 RWLGEPEDFQDPKYDVIGARLAAWPQISVLVAKLCAEKTMKELVAAGQALGVPITAVLTP 300 RWLGEPEDFQDPKYDVIGARLAAWPQISVLVAKLCAEKTMKELVAAGQALGVPITAVLTP Sbjct 241 RWLGEPEDFQDPKYDVIGARLAAWPQISVLVAKLCAEKTMKELVAAGQALGVPITAVLTP 300 Query 301 SRILASEHFQAVGAITDAELVPGVRTGVPTGYFVVDGKRAGFRTPAPAAGQDEPRWLADP 360 SRILASEHFQAVGAITDAELVPGVRTGVPTGYFVVDGKRAGFRTPAPAAGQDEPRWLADP Sbjct 301 SRILASEHFQAVGAITDAELVPGVRTGVPTGYFVVDGKRAGFRTPAPAAGQDEPRWLADP 360 Query 361 APVPPPSGRVGGYPFEGLRILDLGIIVAGGELSRLFGDLGAEVIKVESADHPDGLRQTRV 420 APVPPPSGRVGGYPFEGLRILDLGIIVAGGELSRLFGDLGAEVIKVESADHPDGLRQTRV Sbjct 361 APVPPPSGRVGGYPFEGLRILDLGIIVAGGELSRLFGDLGAEVIKVESADHPDGLRQTRV 420 Query 421 GDAMSESFAWTHRNHLALGLDLRNSEGKAIFGRLVAESDAVFANFKPGTLTSLGFSYDVL 480 GDAMSESFAWTHRNHLALGLDLRNSEGKAIFGRLVAESDAVFANFKPGTLTSLGFSYDVL Sbjct 421 GDAMSESFAWTHRNHLALGLDLRNSEGKAIFGRLVAESDAVFANFKPGTLTSLGFSYDVL 480 Query 481 HAFNPRIVLAGSSAFGNRGPWSTRMGYGPLVRAATGVTRVWTSDEAQPDNSRHPFYDATT 540 HAFNPRIVLAGSSAFGNRGPWSTRMGYGPLVRAATGVTRVWTSDEAQPDNSRHPFYDATT Sbjct 481 HAFNPRIVLAGSSAFGNRGPWSTRMGYGPLVRAATGVTRVWTSDEAQPDNSRHPFYDATT 540 Query 541 IFPDHVVGRVGALLALAALIHRDRTGGGAHVHISQAEVVVNQLDTMFVAEAARATDVAEI 600 IFPDHVVGRVGALLALAALIHRDRTGGGAHVHISQAEVVVNQLDTMFVAEAARATDVAEI Sbjct 541 IFPDHVVGRVGALLALAALIHRDRTGGGAHVHISQAEVVVNQLDTMFVAEAARATDVAEI 600 Query 601 HPDTSVHAVYPCAGDDEWCVISIRSDDEWRRATSVFGQPELANDPRFGASRSRVANRSEL 660 HPDTSVHAVYPCAGDDEWCVISIRSDDEWRRATSVFGQPELANDPRFGASRSRVANRSEL Sbjct 601 HPDTSVHAVYPCAGDDEWCVISIRSDDEWRRATSVFGQPELANDPRFGASRSRVANRSEL 660 Query 661 VAAVSAWTSTRTPVQAAGALQAAGVAAGPMNRPSDILEDPQLIERNLFRDMVHPLIARPL 720 VAAVSAWTSTRTPVQAAGALQAAGVAAGPMNRPSDILEDPQLIERNLFRDMVHPLIARPL Sbjct 661 VAAVSAWTSTRTPVQAAGALQAAGVAAGPMNRPSDILEDPQLIERNLFRDMVHPLIARPL 720 Query 721 PAETGPAPFRHIPQAPQRPAPLPGQDSVQICRKLLGMTADETERLINERVMFGPAVTA 778 PAETGPAPFRHIPQAPQRPAPLPGQDSVQICRKLLGMTADETERLINERVMFGPAVTA Sbjct 721 PAETGPAPFRHIPQAPQRPAPLPGQDSVQICRKLLGMTADETERLINERVMFGPAVTA 778 >gi|345462003|ref|NP_216382.2| hypothetical protein Rv1866 [Mycobacterium tuberculosis H37Rv] Length=794 Score = 1567 bits (4058), Expect = 0.0, Method: Compositional matrix adjust. Identities = 778/778 (100%), Positives = 778/778 (100%), Gaps = 0/778 (0%) Query 1 MVTRLLADLGADVLKVEPPGGSPGRHVRPTLAGTSIGFAMHNANKRSAVLNPLDESDRRR 60 MVTRLLADLGADVLKVEPPGGSPGRHVRPTLAGTSIGFAMHNANKRSAVLNPLDESDRRR Sbjct 17 MVTRLLADLGADVLKVEPPGGSPGRHVRPTLAGTSIGFAMHNANKRSAVLNPLDESDRRR 76 Query 61 FLDLAASADIVVDCGLPGQAAAYGASCAELADRYRHLVALSITDFGAAGPRSSWRATDPV 120 FLDLAASADIVVDCGLPGQAAAYGASCAELADRYRHLVALSITDFGAAGPRSSWRATDPV Sbjct 77 FLDLAASADIVVDCGLPGQAAAYGASCAELADRYRHLVALSITDFGAAGPRSSWRATDPV 136 Query 121 LYAMSGALSRSGPTAGTPVLPPDGIASATAAVQAAWAVLVAYFNRLRCGTGDYIDFSRFD 180 LYAMSGALSRSGPTAGTPVLPPDGIASATAAVQAAWAVLVAYFNRLRCGTGDYIDFSRFD Sbjct 137 LYAMSGALSRSGPTAGTPVLPPDGIASATAAVQAAWAVLVAYFNRLRCGTGDYIDFSRFD 196 Query 181 AVVMALDPPFGAHGQVAAGIRSTGRWRGRPKNQDAYPIYPCRDGYVRFCVMAPRQWRGLR 240 AVVMALDPPFGAHGQVAAGIRSTGRWRGRPKNQDAYPIYPCRDGYVRFCVMAPRQWRGLR Sbjct 197 AVVMALDPPFGAHGQVAAGIRSTGRWRGRPKNQDAYPIYPCRDGYVRFCVMAPRQWRGLR 256 Query 241 RWLGEPEDFQDPKYDVIGARLAAWPQISVLVAKLCAEKTMKELVAAGQALGVPITAVLTP 300 RWLGEPEDFQDPKYDVIGARLAAWPQISVLVAKLCAEKTMKELVAAGQALGVPITAVLTP Sbjct 257 RWLGEPEDFQDPKYDVIGARLAAWPQISVLVAKLCAEKTMKELVAAGQALGVPITAVLTP 316 Query 301 SRILASEHFQAVGAITDAELVPGVRTGVPTGYFVVDGKRAGFRTPAPAAGQDEPRWLADP 360 SRILASEHFQAVGAITDAELVPGVRTGVPTGYFVVDGKRAGFRTPAPAAGQDEPRWLADP Sbjct 317 SRILASEHFQAVGAITDAELVPGVRTGVPTGYFVVDGKRAGFRTPAPAAGQDEPRWLADP 376 Query 361 APVPPPSGRVGGYPFEGLRILDLGIIVAGGELSRLFGDLGAEVIKVESADHPDGLRQTRV 420 APVPPPSGRVGGYPFEGLRILDLGIIVAGGELSRLFGDLGAEVIKVESADHPDGLRQTRV Sbjct 377 APVPPPSGRVGGYPFEGLRILDLGIIVAGGELSRLFGDLGAEVIKVESADHPDGLRQTRV 436 Query 421 GDAMSESFAWTHRNHLALGLDLRNSEGKAIFGRLVAESDAVFANFKPGTLTSLGFSYDVL 480 GDAMSESFAWTHRNHLALGLDLRNSEGKAIFGRLVAESDAVFANFKPGTLTSLGFSYDVL Sbjct 437 GDAMSESFAWTHRNHLALGLDLRNSEGKAIFGRLVAESDAVFANFKPGTLTSLGFSYDVL 496 Query 481 HAFNPRIVLAGSSAFGNRGPWSTRMGYGPLVRAATGVTRVWTSDEAQPDNSRHPFYDATT 540 HAFNPRIVLAGSSAFGNRGPWSTRMGYGPLVRAATGVTRVWTSDEAQPDNSRHPFYDATT Sbjct 497 HAFNPRIVLAGSSAFGNRGPWSTRMGYGPLVRAATGVTRVWTSDEAQPDNSRHPFYDATT 556 Query 541 IFPDHVVGRVGALLALAALIHRDRTGGGAHVHISQAEVVVNQLDTMFVAEAARATDVAEI 600 IFPDHVVGRVGALLALAALIHRDRTGGGAHVHISQAEVVVNQLDTMFVAEAARATDVAEI Sbjct 557 IFPDHVVGRVGALLALAALIHRDRTGGGAHVHISQAEVVVNQLDTMFVAEAARATDVAEI 616 Query 601 HPDTSVHAVYPCAGDDEWCVISIRSDDEWRRATSVFGQPELANDPRFGASRSRVANRSEL 660 HPDTSVHAVYPCAGDDEWCVISIRSDDEWRRATSVFGQPELANDPRFGASRSRVANRSEL Sbjct 617 HPDTSVHAVYPCAGDDEWCVISIRSDDEWRRATSVFGQPELANDPRFGASRSRVANRSEL 676 Query 661 VAAVSAWTSTRTPVQAAGALQAAGVAAGPMNRPSDILEDPQLIERNLFRDMVHPLIARPL 720 VAAVSAWTSTRTPVQAAGALQAAGVAAGPMNRPSDILEDPQLIERNLFRDMVHPLIARPL Sbjct 677 VAAVSAWTSTRTPVQAAGALQAAGVAAGPMNRPSDILEDPQLIERNLFRDMVHPLIARPL 736 Query 721 PAETGPAPFRHIPQAPQRPAPLPGQDSVQICRKLLGMTADETERLINERVMFGPAVTA 778 PAETGPAPFRHIPQAPQRPAPLPGQDSVQICRKLLGMTADETERLINERVMFGPAVTA Sbjct 737 PAETGPAPFRHIPQAPQRPAPLPGQDSVQICRKLLGMTADETERLINERVMFGPAVTA 794 >gi|148823077|ref|YP_001287831.1| hypothetical protein TBFG_11894 [Mycobacterium tuberculosis F11] gi|253799090|ref|YP_003032091.1| hypothetical protein TBMG_02128 [Mycobacterium tuberculosis KZN 1435] gi|289554360|ref|ZP_06443570.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 605] 24 more sequence titles Length=802 Score = 1567 bits (4058), Expect = 0.0, Method: Compositional matrix adjust. Identities = 778/778 (100%), Positives = 778/778 (100%), Gaps = 0/778 (0%) Query 1 MVTRLLADLGADVLKVEPPGGSPGRHVRPTLAGTSIGFAMHNANKRSAVLNPLDESDRRR 60 MVTRLLADLGADVLKVEPPGGSPGRHVRPTLAGTSIGFAMHNANKRSAVLNPLDESDRRR Sbjct 25 MVTRLLADLGADVLKVEPPGGSPGRHVRPTLAGTSIGFAMHNANKRSAVLNPLDESDRRR 84 Query 61 FLDLAASADIVVDCGLPGQAAAYGASCAELADRYRHLVALSITDFGAAGPRSSWRATDPV 120 FLDLAASADIVVDCGLPGQAAAYGASCAELADRYRHLVALSITDFGAAGPRSSWRATDPV Sbjct 85 FLDLAASADIVVDCGLPGQAAAYGASCAELADRYRHLVALSITDFGAAGPRSSWRATDPV 144 Query 121 LYAMSGALSRSGPTAGTPVLPPDGIASATAAVQAAWAVLVAYFNRLRCGTGDYIDFSRFD 180 LYAMSGALSRSGPTAGTPVLPPDGIASATAAVQAAWAVLVAYFNRLRCGTGDYIDFSRFD Sbjct 145 LYAMSGALSRSGPTAGTPVLPPDGIASATAAVQAAWAVLVAYFNRLRCGTGDYIDFSRFD 204 Query 181 AVVMALDPPFGAHGQVAAGIRSTGRWRGRPKNQDAYPIYPCRDGYVRFCVMAPRQWRGLR 240 AVVMALDPPFGAHGQVAAGIRSTGRWRGRPKNQDAYPIYPCRDGYVRFCVMAPRQWRGLR Sbjct 205 AVVMALDPPFGAHGQVAAGIRSTGRWRGRPKNQDAYPIYPCRDGYVRFCVMAPRQWRGLR 264 Query 241 RWLGEPEDFQDPKYDVIGARLAAWPQISVLVAKLCAEKTMKELVAAGQALGVPITAVLTP 300 RWLGEPEDFQDPKYDVIGARLAAWPQISVLVAKLCAEKTMKELVAAGQALGVPITAVLTP Sbjct 265 RWLGEPEDFQDPKYDVIGARLAAWPQISVLVAKLCAEKTMKELVAAGQALGVPITAVLTP 324 Query 301 SRILASEHFQAVGAITDAELVPGVRTGVPTGYFVVDGKRAGFRTPAPAAGQDEPRWLADP 360 SRILASEHFQAVGAITDAELVPGVRTGVPTGYFVVDGKRAGFRTPAPAAGQDEPRWLADP Sbjct 325 SRILASEHFQAVGAITDAELVPGVRTGVPTGYFVVDGKRAGFRTPAPAAGQDEPRWLADP 384 Query 361 APVPPPSGRVGGYPFEGLRILDLGIIVAGGELSRLFGDLGAEVIKVESADHPDGLRQTRV 420 APVPPPSGRVGGYPFEGLRILDLGIIVAGGELSRLFGDLGAEVIKVESADHPDGLRQTRV Sbjct 385 APVPPPSGRVGGYPFEGLRILDLGIIVAGGELSRLFGDLGAEVIKVESADHPDGLRQTRV 444 Query 421 GDAMSESFAWTHRNHLALGLDLRNSEGKAIFGRLVAESDAVFANFKPGTLTSLGFSYDVL 480 GDAMSESFAWTHRNHLALGLDLRNSEGKAIFGRLVAESDAVFANFKPGTLTSLGFSYDVL Sbjct 445 GDAMSESFAWTHRNHLALGLDLRNSEGKAIFGRLVAESDAVFANFKPGTLTSLGFSYDVL 504 Query 481 HAFNPRIVLAGSSAFGNRGPWSTRMGYGPLVRAATGVTRVWTSDEAQPDNSRHPFYDATT 540 HAFNPRIVLAGSSAFGNRGPWSTRMGYGPLVRAATGVTRVWTSDEAQPDNSRHPFYDATT Sbjct 505 HAFNPRIVLAGSSAFGNRGPWSTRMGYGPLVRAATGVTRVWTSDEAQPDNSRHPFYDATT 564 Query 541 IFPDHVVGRVGALLALAALIHRDRTGGGAHVHISQAEVVVNQLDTMFVAEAARATDVAEI 600 IFPDHVVGRVGALLALAALIHRDRTGGGAHVHISQAEVVVNQLDTMFVAEAARATDVAEI Sbjct 565 IFPDHVVGRVGALLALAALIHRDRTGGGAHVHISQAEVVVNQLDTMFVAEAARATDVAEI 624 Query 601 HPDTSVHAVYPCAGDDEWCVISIRSDDEWRRATSVFGQPELANDPRFGASRSRVANRSEL 660 HPDTSVHAVYPCAGDDEWCVISIRSDDEWRRATSVFGQPELANDPRFGASRSRVANRSEL Sbjct 625 HPDTSVHAVYPCAGDDEWCVISIRSDDEWRRATSVFGQPELANDPRFGASRSRVANRSEL 684 Query 661 VAAVSAWTSTRTPVQAAGALQAAGVAAGPMNRPSDILEDPQLIERNLFRDMVHPLIARPL 720 VAAVSAWTSTRTPVQAAGALQAAGVAAGPMNRPSDILEDPQLIERNLFRDMVHPLIARPL Sbjct 685 VAAVSAWTSTRTPVQAAGALQAAGVAAGPMNRPSDILEDPQLIERNLFRDMVHPLIARPL 744 Query 721 PAETGPAPFRHIPQAPQRPAPLPGQDSVQICRKLLGMTADETERLINERVMFGPAVTA 778 PAETGPAPFRHIPQAPQRPAPLPGQDSVQICRKLLGMTADETERLINERVMFGPAVTA Sbjct 745 PAETGPAPFRHIPQAPQRPAPLPGQDSVQICRKLLGMTADETERLINERVMFGPAVTA 802 >gi|148661672|ref|YP_001283195.1| hypothetical protein MRA_1877 [Mycobacterium tuberculosis H37Ra] gi|167970347|ref|ZP_02552624.1| hypothetical protein MtubH3_20893 [Mycobacterium tuberculosis H37Ra] gi|254364687|ref|ZP_04980733.1| conserved hypothetical protein [Mycobacterium tuberculosis str. Haarlem] 13 more sequence titles Length=804 Score = 1567 bits (4058), Expect = 0.0, Method: Compositional matrix adjust. Identities = 778/778 (100%), Positives = 778/778 (100%), Gaps = 0/778 (0%) Query 1 MVTRLLADLGADVLKVEPPGGSPGRHVRPTLAGTSIGFAMHNANKRSAVLNPLDESDRRR 60 MVTRLLADLGADVLKVEPPGGSPGRHVRPTLAGTSIGFAMHNANKRSAVLNPLDESDRRR Sbjct 27 MVTRLLADLGADVLKVEPPGGSPGRHVRPTLAGTSIGFAMHNANKRSAVLNPLDESDRRR 86 Query 61 FLDLAASADIVVDCGLPGQAAAYGASCAELADRYRHLVALSITDFGAAGPRSSWRATDPV 120 FLDLAASADIVVDCGLPGQAAAYGASCAELADRYRHLVALSITDFGAAGPRSSWRATDPV Sbjct 87 FLDLAASADIVVDCGLPGQAAAYGASCAELADRYRHLVALSITDFGAAGPRSSWRATDPV 146 Query 121 LYAMSGALSRSGPTAGTPVLPPDGIASATAAVQAAWAVLVAYFNRLRCGTGDYIDFSRFD 180 LYAMSGALSRSGPTAGTPVLPPDGIASATAAVQAAWAVLVAYFNRLRCGTGDYIDFSRFD Sbjct 147 LYAMSGALSRSGPTAGTPVLPPDGIASATAAVQAAWAVLVAYFNRLRCGTGDYIDFSRFD 206 Query 181 AVVMALDPPFGAHGQVAAGIRSTGRWRGRPKNQDAYPIYPCRDGYVRFCVMAPRQWRGLR 240 AVVMALDPPFGAHGQVAAGIRSTGRWRGRPKNQDAYPIYPCRDGYVRFCVMAPRQWRGLR Sbjct 207 AVVMALDPPFGAHGQVAAGIRSTGRWRGRPKNQDAYPIYPCRDGYVRFCVMAPRQWRGLR 266 Query 241 RWLGEPEDFQDPKYDVIGARLAAWPQISVLVAKLCAEKTMKELVAAGQALGVPITAVLTP 300 RWLGEPEDFQDPKYDVIGARLAAWPQISVLVAKLCAEKTMKELVAAGQALGVPITAVLTP Sbjct 267 RWLGEPEDFQDPKYDVIGARLAAWPQISVLVAKLCAEKTMKELVAAGQALGVPITAVLTP 326 Query 301 SRILASEHFQAVGAITDAELVPGVRTGVPTGYFVVDGKRAGFRTPAPAAGQDEPRWLADP 360 SRILASEHFQAVGAITDAELVPGVRTGVPTGYFVVDGKRAGFRTPAPAAGQDEPRWLADP Sbjct 327 SRILASEHFQAVGAITDAELVPGVRTGVPTGYFVVDGKRAGFRTPAPAAGQDEPRWLADP 386 Query 361 APVPPPSGRVGGYPFEGLRILDLGIIVAGGELSRLFGDLGAEVIKVESADHPDGLRQTRV 420 APVPPPSGRVGGYPFEGLRILDLGIIVAGGELSRLFGDLGAEVIKVESADHPDGLRQTRV Sbjct 387 APVPPPSGRVGGYPFEGLRILDLGIIVAGGELSRLFGDLGAEVIKVESADHPDGLRQTRV 446 Query 421 GDAMSESFAWTHRNHLALGLDLRNSEGKAIFGRLVAESDAVFANFKPGTLTSLGFSYDVL 480 GDAMSESFAWTHRNHLALGLDLRNSEGKAIFGRLVAESDAVFANFKPGTLTSLGFSYDVL Sbjct 447 GDAMSESFAWTHRNHLALGLDLRNSEGKAIFGRLVAESDAVFANFKPGTLTSLGFSYDVL 506 Query 481 HAFNPRIVLAGSSAFGNRGPWSTRMGYGPLVRAATGVTRVWTSDEAQPDNSRHPFYDATT 540 HAFNPRIVLAGSSAFGNRGPWSTRMGYGPLVRAATGVTRVWTSDEAQPDNSRHPFYDATT Sbjct 507 HAFNPRIVLAGSSAFGNRGPWSTRMGYGPLVRAATGVTRVWTSDEAQPDNSRHPFYDATT 566 Query 541 IFPDHVVGRVGALLALAALIHRDRTGGGAHVHISQAEVVVNQLDTMFVAEAARATDVAEI 600 IFPDHVVGRVGALLALAALIHRDRTGGGAHVHISQAEVVVNQLDTMFVAEAARATDVAEI Sbjct 567 IFPDHVVGRVGALLALAALIHRDRTGGGAHVHISQAEVVVNQLDTMFVAEAARATDVAEI 626 Query 601 HPDTSVHAVYPCAGDDEWCVISIRSDDEWRRATSVFGQPELANDPRFGASRSRVANRSEL 660 HPDTSVHAVYPCAGDDEWCVISIRSDDEWRRATSVFGQPELANDPRFGASRSRVANRSEL Sbjct 627 HPDTSVHAVYPCAGDDEWCVISIRSDDEWRRATSVFGQPELANDPRFGASRSRVANRSEL 686 Query 661 VAAVSAWTSTRTPVQAAGALQAAGVAAGPMNRPSDILEDPQLIERNLFRDMVHPLIARPL 720 VAAVSAWTSTRTPVQAAGALQAAGVAAGPMNRPSDILEDPQLIERNLFRDMVHPLIARPL Sbjct 687 VAAVSAWTSTRTPVQAAGALQAAGVAAGPMNRPSDILEDPQLIERNLFRDMVHPLIARPL 746 Query 721 PAETGPAPFRHIPQAPQRPAPLPGQDSVQICRKLLGMTADETERLINERVMFGPAVTA 778 PAETGPAPFRHIPQAPQRPAPLPGQDSVQICRKLLGMTADETERLINERVMFGPAVTA Sbjct 747 PAETGPAPFRHIPQAPQRPAPLPGQDSVQICRKLLGMTADETERLINERVMFGPAVTA 804 >gi|31793056|ref|NP_855549.1| hypothetical protein Mb1897 [Mycobacterium bovis AF2122/97] gi|121637769|ref|YP_977992.1| hypothetical protein BCG_1902 [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224990253|ref|YP_002644940.1| hypothetical protein JTY_1886 [Mycobacterium bovis BCG str. Tokyo 172] gi|31618647|emb|CAD94600.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium bovis AF2122/97] gi|121493416|emb|CAL71889.1| Conserved hypothetical protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224773366|dbj|BAH26172.1| hypothetical protein JTY_1886 [Mycobacterium bovis BCG str. Tokyo 172] gi|341601796|emb|CCC64470.1| conserved hypothetical protein [Mycobacterium bovis BCG str. Moreau RDJ] Length=778 Score = 1567 bits (4057), Expect = 0.0, Method: Compositional matrix adjust. Identities = 777/778 (99%), Positives = 778/778 (100%), Gaps = 0/778 (0%) Query 1 MVTRLLADLGADVLKVEPPGGSPGRHVRPTLAGTSIGFAMHNANKRSAVLNPLDESDRRR 60 MVTRLLADLGADVLKV+PPGGSPGRHVRPTLAGTSIGFAMHNANKRSAVLNPLDESDRRR Sbjct 1 MVTRLLADLGADVLKVQPPGGSPGRHVRPTLAGTSIGFAMHNANKRSAVLNPLDESDRRR 60 Query 61 FLDLAASADIVVDCGLPGQAAAYGASCAELADRYRHLVALSITDFGAAGPRSSWRATDPV 120 FLDLAASADIVVDCGLPGQAAAYGASCAELADRYRHLVALSITDFGAAGPRSSWRATDPV Sbjct 61 FLDLAASADIVVDCGLPGQAAAYGASCAELADRYRHLVALSITDFGAAGPRSSWRATDPV 120 Query 121 LYAMSGALSRSGPTAGTPVLPPDGIASATAAVQAAWAVLVAYFNRLRCGTGDYIDFSRFD 180 LYAMSGALSRSGPTAGTPVLPPDGIASATAAVQAAWAVLVAYFNRLRCGTGDYIDFSRFD Sbjct 121 LYAMSGALSRSGPTAGTPVLPPDGIASATAAVQAAWAVLVAYFNRLRCGTGDYIDFSRFD 180 Query 181 AVVMALDPPFGAHGQVAAGIRSTGRWRGRPKNQDAYPIYPCRDGYVRFCVMAPRQWRGLR 240 AVVMALDPPFGAHGQVAAGIRSTGRWRGRPKNQDAYPIYPCRDGYVRFCVMAPRQWRGLR Sbjct 181 AVVMALDPPFGAHGQVAAGIRSTGRWRGRPKNQDAYPIYPCRDGYVRFCVMAPRQWRGLR 240 Query 241 RWLGEPEDFQDPKYDVIGARLAAWPQISVLVAKLCAEKTMKELVAAGQALGVPITAVLTP 300 RWLGEPEDFQDPKYDVIGARLAAWPQISVLVAKLCAEKTMKELVAAGQALGVPITAVLTP Sbjct 241 RWLGEPEDFQDPKYDVIGARLAAWPQISVLVAKLCAEKTMKELVAAGQALGVPITAVLTP 300 Query 301 SRILASEHFQAVGAITDAELVPGVRTGVPTGYFVVDGKRAGFRTPAPAAGQDEPRWLADP 360 SRILASEHFQAVGAITDAELVPGVRTGVPTGYFVVDGKRAGFRTPAPAAGQDEPRWLADP Sbjct 301 SRILASEHFQAVGAITDAELVPGVRTGVPTGYFVVDGKRAGFRTPAPAAGQDEPRWLADP 360 Query 361 APVPPPSGRVGGYPFEGLRILDLGIIVAGGELSRLFGDLGAEVIKVESADHPDGLRQTRV 420 APVPPPSGRVGGYPFEGLRILDLGIIVAGGELSRLFGDLGAEVIKVESADHPDGLRQTRV Sbjct 361 APVPPPSGRVGGYPFEGLRILDLGIIVAGGELSRLFGDLGAEVIKVESADHPDGLRQTRV 420 Query 421 GDAMSESFAWTHRNHLALGLDLRNSEGKAIFGRLVAESDAVFANFKPGTLTSLGFSYDVL 480 GDAMSESFAWTHRNHLALGLDLRNSEGKAIFGRLVAESDAVFANFKPGTLTSLGFSYDVL Sbjct 421 GDAMSESFAWTHRNHLALGLDLRNSEGKAIFGRLVAESDAVFANFKPGTLTSLGFSYDVL 480 Query 481 HAFNPRIVLAGSSAFGNRGPWSTRMGYGPLVRAATGVTRVWTSDEAQPDNSRHPFYDATT 540 HAFNPRIVLAGSSAFGNRGPWSTRMGYGPLVRAATGVTRVWTSDEAQPDNSRHPFYDATT Sbjct 481 HAFNPRIVLAGSSAFGNRGPWSTRMGYGPLVRAATGVTRVWTSDEAQPDNSRHPFYDATT 540 Query 541 IFPDHVVGRVGALLALAALIHRDRTGGGAHVHISQAEVVVNQLDTMFVAEAARATDVAEI 600 IFPDHVVGRVGALLALAALIHRDRTGGGAHVHISQAEVVVNQLDTMFVAEAARATDVAEI Sbjct 541 IFPDHVVGRVGALLALAALIHRDRTGGGAHVHISQAEVVVNQLDTMFVAEAARATDVAEI 600 Query 601 HPDTSVHAVYPCAGDDEWCVISIRSDDEWRRATSVFGQPELANDPRFGASRSRVANRSEL 660 HPDTSVHAVYPCAGDDEWCVISIRSDDEWRRATSVFGQPELANDPRFGASRSRVANRSEL Sbjct 601 HPDTSVHAVYPCAGDDEWCVISIRSDDEWRRATSVFGQPELANDPRFGASRSRVANRSEL 660 Query 661 VAAVSAWTSTRTPVQAAGALQAAGVAAGPMNRPSDILEDPQLIERNLFRDMVHPLIARPL 720 VAAVSAWTSTRTPVQAAGALQAAGVAAGPMNRPSDILEDPQLIERNLFRDMVHPLIARPL Sbjct 661 VAAVSAWTSTRTPVQAAGALQAAGVAAGPMNRPSDILEDPQLIERNLFRDMVHPLIARPL 720 Query 721 PAETGPAPFRHIPQAPQRPAPLPGQDSVQICRKLLGMTADETERLINERVMFGPAVTA 778 PAETGPAPFRHIPQAPQRPAPLPGQDSVQICRKLLGMTADETERLINERVMFGPAVTA Sbjct 721 PAETGPAPFRHIPQAPQRPAPLPGQDSVQICRKLLGMTADETERLINERVMFGPAVTA 778 >gi|289574548|ref|ZP_06454775.1| conserved hypothetical protein [Mycobacterium tuberculosis K85] gi|339631919|ref|YP_004723561.1| hypothetical protein MAF_18880 [Mycobacterium africanum GM041182] gi|289538979|gb|EFD43557.1| conserved hypothetical protein [Mycobacterium tuberculosis K85] gi|339331275|emb|CCC26958.1| conserved hypothetical protein [Mycobacterium africanum GM041182] Length=778 Score = 1565 bits (4053), Expect = 0.0, Method: Compositional matrix adjust. Identities = 777/778 (99%), Positives = 777/778 (99%), Gaps = 0/778 (0%) Query 1 MVTRLLADLGADVLKVEPPGGSPGRHVRPTLAGTSIGFAMHNANKRSAVLNPLDESDRRR 60 MVTRLLADLGADVLKVEPPGGSPGRHVRPTLAGTSIGFAMHNANKRSAVLNPLDESDRRR Sbjct 1 MVTRLLADLGADVLKVEPPGGSPGRHVRPTLAGTSIGFAMHNANKRSAVLNPLDESDRRR 60 Query 61 FLDLAASADIVVDCGLPGQAAAYGASCAELADRYRHLVALSITDFGAAGPRSSWRATDPV 120 FLDLAASADIVVDCGLPGQAAAYGASCAELADRYRHLVALSITDFGAAGPRSSWRATDPV Sbjct 61 FLDLAASADIVVDCGLPGQAAAYGASCAELADRYRHLVALSITDFGAAGPRSSWRATDPV 120 Query 121 LYAMSGALSRSGPTAGTPVLPPDGIASATAAVQAAWAVLVAYFNRLRCGTGDYIDFSRFD 180 LYAMSGALSRSGPTAGTPVLPPDGIASATAAVQAAWAVLVAYFNRLRCGTGDYIDFSRFD Sbjct 121 LYAMSGALSRSGPTAGTPVLPPDGIASATAAVQAAWAVLVAYFNRLRCGTGDYIDFSRFD 180 Query 181 AVVMALDPPFGAHGQVAAGIRSTGRWRGRPKNQDAYPIYPCRDGYVRFCVMAPRQWRGLR 240 AVVMALDPPFGAHGQVAAGIRSTGRWRGRPKNQDAYPIYPCRDGYVRFCVMAPRQWRGLR Sbjct 181 AVVMALDPPFGAHGQVAAGIRSTGRWRGRPKNQDAYPIYPCRDGYVRFCVMAPRQWRGLR 240 Query 241 RWLGEPEDFQDPKYDVIGARLAAWPQISVLVAKLCAEKTMKELVAAGQALGVPITAVLTP 300 RWLGEPEDFQDPKYDVIGARLAAWPQISVLVAKLCAEKTMKELVAAGQALGVPITAVLTP Sbjct 241 RWLGEPEDFQDPKYDVIGARLAAWPQISVLVAKLCAEKTMKELVAAGQALGVPITAVLTP 300 Query 301 SRILASEHFQAVGAITDAELVPGVRTGVPTGYFVVDGKRAGFRTPAPAAGQDEPRWLADP 360 SRILASEHFQAVGAITDAELVPGVRTGVPTGYFVVDGKRAGFRTPAPAAGQDEPRWLADP Sbjct 301 SRILASEHFQAVGAITDAELVPGVRTGVPTGYFVVDGKRAGFRTPAPAAGQDEPRWLADP 360 Query 361 APVPPPSGRVGGYPFEGLRILDLGIIVAGGELSRLFGDLGAEVIKVESADHPDGLRQTRV 420 APVPPPSGRVGGYPFEGLRILDLGIIVAGGELSRLFGDLGAEVIKVESADHPDGLRQTRV Sbjct 361 APVPPPSGRVGGYPFEGLRILDLGIIVAGGELSRLFGDLGAEVIKVESADHPDGLRQTRV 420 Query 421 GDAMSESFAWTHRNHLALGLDLRNSEGKAIFGRLVAESDAVFANFKPGTLTSLGFSYDVL 480 GDAMSESFAWTHRNHLALGLDLRNSEGKAIFGRLVAESDAVFANFKPGTLTSLGFSYDVL Sbjct 421 GDAMSESFAWTHRNHLALGLDLRNSEGKAIFGRLVAESDAVFANFKPGTLTSLGFSYDVL 480 Query 481 HAFNPRIVLAGSSAFGNRGPWSTRMGYGPLVRAATGVTRVWTSDEAQPDNSRHPFYDATT 540 HAFNPRIVLAGSSAFGNRGPWSTRMGYGPLVRAATGVTRVWTSDEAQPDNSRHPFYDATT Sbjct 481 HAFNPRIVLAGSSAFGNRGPWSTRMGYGPLVRAATGVTRVWTSDEAQPDNSRHPFYDATT 540 Query 541 IFPDHVVGRVGALLALAALIHRDRTGGGAHVHISQAEVVVNQLDTMFVAEAARATDVAEI 600 IFPDHVVGRVGALLALAALIHRDRTGGGAHVHISQAEVVVNQLDTMFVAEAARATDVAEI Sbjct 541 IFPDHVVGRVGALLALAALIHRDRTGGGAHVHISQAEVVVNQLDTMFVAEAARATDVAEI 600 Query 601 HPDTSVHAVYPCAGDDEWCVISIRSDDEWRRATSVFGQPELANDPRFGASRSRVANRSEL 660 HPDTSVHAVYPCAGDDEWCVISIRSDDEWRRATSVFGQPEL NDPRFGASRSRVANRSEL Sbjct 601 HPDTSVHAVYPCAGDDEWCVISIRSDDEWRRATSVFGQPELVNDPRFGASRSRVANRSEL 660 Query 661 VAAVSAWTSTRTPVQAAGALQAAGVAAGPMNRPSDILEDPQLIERNLFRDMVHPLIARPL 720 VAAVSAWTSTRTPVQAAGALQAAGVAAGPMNRPSDILEDPQLIERNLFRDMVHPLIARPL Sbjct 661 VAAVSAWTSTRTPVQAAGALQAAGVAAGPMNRPSDILEDPQLIERNLFRDMVHPLIARPL 720 Query 721 PAETGPAPFRHIPQAPQRPAPLPGQDSVQICRKLLGMTADETERLINERVMFGPAVTA 778 PAETGPAPFRHIPQAPQRPAPLPGQDSVQICRKLLGMTADETERLINERVMFGPAVTA Sbjct 721 PAETGPAPFRHIPQAPQRPAPLPGQDSVQICRKLLGMTADETERLINERVMFGPAVTA 778 >gi|323719607|gb|EGB28730.1| hypothetical protein TMMG_01123 [Mycobacterium tuberculosis CDC1551A] Length=802 Score = 1565 bits (4052), Expect = 0.0, Method: Compositional matrix adjust. Identities = 777/778 (99%), Positives = 778/778 (100%), Gaps = 0/778 (0%) Query 1 MVTRLLADLGADVLKVEPPGGSPGRHVRPTLAGTSIGFAMHNANKRSAVLNPLDESDRRR 60 MVTRLLADLGADVLKVEPPGGSPGRHVRPTLAGTSIGFAMHNANKRSAVLNPLDESDRRR Sbjct 25 MVTRLLADLGADVLKVEPPGGSPGRHVRPTLAGTSIGFAMHNANKRSAVLNPLDESDRRR 84 Query 61 FLDLAASADIVVDCGLPGQAAAYGASCAELADRYRHLVALSITDFGAAGPRSSWRATDPV 120 FLDLAASADIVVDCGLPGQAAAYGASCAELADRYRHLVALSITDFGAAGPRSSWRATDPV Sbjct 85 FLDLAASADIVVDCGLPGQAAAYGASCAELADRYRHLVALSITDFGAAGPRSSWRATDPV 144 Query 121 LYAMSGALSRSGPTAGTPVLPPDGIASATAAVQAAWAVLVAYFNRLRCGTGDYIDFSRFD 180 LYAMSGALSRSGPTAGTPVLPPDGIASATAAVQAAWAVLVAYFNRLRCGTGDYIDFSRFD Sbjct 145 LYAMSGALSRSGPTAGTPVLPPDGIASATAAVQAAWAVLVAYFNRLRCGTGDYIDFSRFD 204 Query 181 AVVMALDPPFGAHGQVAAGIRSTGRWRGRPKNQDAYPIYPCRDGYVRFCVMAPRQWRGLR 240 AVVMALDPPFGAHGQVAAGIRSTGRWRGRPKNQDAYPIYPCRDGYVRFCVMAPRQWRGLR Sbjct 205 AVVMALDPPFGAHGQVAAGIRSTGRWRGRPKNQDAYPIYPCRDGYVRFCVMAPRQWRGLR 264 Query 241 RWLGEPEDFQDPKYDVIGARLAAWPQISVLVAKLCAEKTMKELVAAGQALGVPITAVLTP 300 RWLGEPEDFQDPKYDVIGARLAAWPQISVLVAKLCAEKTMKELVAAGQALGVPITAVLTP Sbjct 265 RWLGEPEDFQDPKYDVIGARLAAWPQISVLVAKLCAEKTMKELVAAGQALGVPITAVLTP 324 Query 301 SRILASEHFQAVGAITDAELVPGVRTGVPTGYFVVDGKRAGFRTPAPAAGQDEPRWLADP 360 SRILASEHFQAVGAITDAELVPGVRTGVPTGYFVVDGKRAGFRTPAPAAGQDEPRWLADP Sbjct 325 SRILASEHFQAVGAITDAELVPGVRTGVPTGYFVVDGKRAGFRTPAPAAGQDEPRWLADP 384 Query 361 APVPPPSGRVGGYPFEGLRILDLGIIVAGGELSRLFGDLGAEVIKVESADHPDGLRQTRV 420 APVPPPSGRVGGYPFEGLRILDLGIIVAGGELSRLFGDLGAEVIKVESADHPDGLRQTRV Sbjct 385 APVPPPSGRVGGYPFEGLRILDLGIIVAGGELSRLFGDLGAEVIKVESADHPDGLRQTRV 444 Query 421 GDAMSESFAWTHRNHLALGLDLRNSEGKAIFGRLVAESDAVFANFKPGTLTSLGFSYDVL 480 GDAMSESFAWTHRNHLALGLDLRNSEGKAIFGRLVAESDAVFANFKPGTLTSLGFSYDVL Sbjct 445 GDAMSESFAWTHRNHLALGLDLRNSEGKAIFGRLVAESDAVFANFKPGTLTSLGFSYDVL 504 Query 481 HAFNPRIVLAGSSAFGNRGPWSTRMGYGPLVRAATGVTRVWTSDEAQPDNSRHPFYDATT 540 HAFNPRIVLAGSSAFGNRGPWSTRMGYGPLVRAATGVTRVWTSDEAQPDNSRHPFYDATT Sbjct 505 HAFNPRIVLAGSSAFGNRGPWSTRMGYGPLVRAATGVTRVWTSDEAQPDNSRHPFYDATT 564 Query 541 IFPDHVVGRVGALLALAALIHRDRTGGGAHVHISQAEVVVNQLDTMFVAEAARATDVAEI 600 IFPDHVVGRVGALLALAALIHRDRTGGGAHVHISQAEVVVNQLDTMFVAEAARATDVAEI Sbjct 565 IFPDHVVGRVGALLALAALIHRDRTGGGAHVHISQAEVVVNQLDTMFVAEAARATDVAEI 624 Query 601 HPDTSVHAVYPCAGDDEWCVISIRSDDEWRRATSVFGQPELANDPRFGASRSRVANRSEL 660 HPDTSVHAVYPCAGDDEWCVISIRSDDEWRRATSVFGQPELANDPRFGASRSRVANRSEL Sbjct 625 HPDTSVHAVYPCAGDDEWCVISIRSDDEWRRATSVFGQPELANDPRFGASRSRVANRSEL 684 Query 661 VAAVSAWTSTRTPVQAAGALQAAGVAAGPMNRPSDILEDPQLIERNLFRDMVHPLIARPL 720 VAAVSAWTSTRTPVQAAGALQAAGVAAGPM+RPSDILEDPQLIERNLFRDMVHPLIARPL Sbjct 685 VAAVSAWTSTRTPVQAAGALQAAGVAAGPMHRPSDILEDPQLIERNLFRDMVHPLIARPL 744 Query 721 PAETGPAPFRHIPQAPQRPAPLPGQDSVQICRKLLGMTADETERLINERVMFGPAVTA 778 PAETGPAPFRHIPQAPQRPAPLPGQDSVQICRKLLGMTADETERLINERVMFGPAVTA Sbjct 745 PAETGPAPFRHIPQAPQRPAPLPGQDSVQICRKLLGMTADETERLINERVMFGPAVTA 802 >gi|15841335|ref|NP_336372.1| hypothetical protein MT1915 [Mycobacterium tuberculosis CDC1551] gi|13881567|gb|AAK46186.1| conserved hypothetical protein [Mycobacterium tuberculosis CDC1551] Length=804 Score = 1565 bits (4051), Expect = 0.0, Method: Compositional matrix adjust. Identities = 777/778 (99%), Positives = 778/778 (100%), Gaps = 0/778 (0%) Query 1 MVTRLLADLGADVLKVEPPGGSPGRHVRPTLAGTSIGFAMHNANKRSAVLNPLDESDRRR 60 MVTRLLADLGADVLKVEPPGGSPGRHVRPTLAGTSIGFAMHNANKRSAVLNPLDESDRRR Sbjct 27 MVTRLLADLGADVLKVEPPGGSPGRHVRPTLAGTSIGFAMHNANKRSAVLNPLDESDRRR 86 Query 61 FLDLAASADIVVDCGLPGQAAAYGASCAELADRYRHLVALSITDFGAAGPRSSWRATDPV 120 FLDLAASADIVVDCGLPGQAAAYGASCAELADRYRHLVALSITDFGAAGPRSSWRATDPV Sbjct 87 FLDLAASADIVVDCGLPGQAAAYGASCAELADRYRHLVALSITDFGAAGPRSSWRATDPV 146 Query 121 LYAMSGALSRSGPTAGTPVLPPDGIASATAAVQAAWAVLVAYFNRLRCGTGDYIDFSRFD 180 LYAMSGALSRSGPTAGTPVLPPDGIASATAAVQAAWAVLVAYFNRLRCGTGDYIDFSRFD Sbjct 147 LYAMSGALSRSGPTAGTPVLPPDGIASATAAVQAAWAVLVAYFNRLRCGTGDYIDFSRFD 206 Query 181 AVVMALDPPFGAHGQVAAGIRSTGRWRGRPKNQDAYPIYPCRDGYVRFCVMAPRQWRGLR 240 AVVMALDPPFGAHGQVAAGIRSTGRWRGRPKNQDAYPIYPCRDGYVRFCVMAPRQWRGLR Sbjct 207 AVVMALDPPFGAHGQVAAGIRSTGRWRGRPKNQDAYPIYPCRDGYVRFCVMAPRQWRGLR 266 Query 241 RWLGEPEDFQDPKYDVIGARLAAWPQISVLVAKLCAEKTMKELVAAGQALGVPITAVLTP 300 RWLGEPEDFQDPKYDVIGARLAAWPQISVLVAKLCAEKTMKELVAAGQALGVPITAVLTP Sbjct 267 RWLGEPEDFQDPKYDVIGARLAAWPQISVLVAKLCAEKTMKELVAAGQALGVPITAVLTP 326 Query 301 SRILASEHFQAVGAITDAELVPGVRTGVPTGYFVVDGKRAGFRTPAPAAGQDEPRWLADP 360 SRILASEHFQAVGAITDAELVPGVRTGVPTGYFVVDGKRAGFRTPAPAAGQDEPRWLADP Sbjct 327 SRILASEHFQAVGAITDAELVPGVRTGVPTGYFVVDGKRAGFRTPAPAAGQDEPRWLADP 386 Query 361 APVPPPSGRVGGYPFEGLRILDLGIIVAGGELSRLFGDLGAEVIKVESADHPDGLRQTRV 420 APVPPPSGRVGGYPFEGLRILDLGIIVAGGELSRLFGDLGAEVIKVESADHPDGLRQTRV Sbjct 387 APVPPPSGRVGGYPFEGLRILDLGIIVAGGELSRLFGDLGAEVIKVESADHPDGLRQTRV 446 Query 421 GDAMSESFAWTHRNHLALGLDLRNSEGKAIFGRLVAESDAVFANFKPGTLTSLGFSYDVL 480 GDAMSESFAWTHRNHLALGLDLRNSEGKAIFGRLVAESDAVFANFKPGTLTSLGFSYDVL Sbjct 447 GDAMSESFAWTHRNHLALGLDLRNSEGKAIFGRLVAESDAVFANFKPGTLTSLGFSYDVL 506 Query 481 HAFNPRIVLAGSSAFGNRGPWSTRMGYGPLVRAATGVTRVWTSDEAQPDNSRHPFYDATT 540 HAFNPRIVLAGSSAFGNRGPWSTRMGYGPLVRAATGVTRVWTSDEAQPDNSRHPFYDATT Sbjct 507 HAFNPRIVLAGSSAFGNRGPWSTRMGYGPLVRAATGVTRVWTSDEAQPDNSRHPFYDATT 566 Query 541 IFPDHVVGRVGALLALAALIHRDRTGGGAHVHISQAEVVVNQLDTMFVAEAARATDVAEI 600 IFPDHVVGRVGALLALAALIHRDRTGGGAHVHISQAEVVVNQLDTMFVAEAARATDVAEI Sbjct 567 IFPDHVVGRVGALLALAALIHRDRTGGGAHVHISQAEVVVNQLDTMFVAEAARATDVAEI 626 Query 601 HPDTSVHAVYPCAGDDEWCVISIRSDDEWRRATSVFGQPELANDPRFGASRSRVANRSEL 660 HPDTSVHAVYPCAGDDEWCVISIRSDDEWRRATSVFGQPELANDPRFGASRSRVANRSEL Sbjct 627 HPDTSVHAVYPCAGDDEWCVISIRSDDEWRRATSVFGQPELANDPRFGASRSRVANRSEL 686 Query 661 VAAVSAWTSTRTPVQAAGALQAAGVAAGPMNRPSDILEDPQLIERNLFRDMVHPLIARPL 720 VAAVSAWTSTRTPVQAAGALQAAGVAAGPM+RPSDILEDPQLIERNLFRDMVHPLIARPL Sbjct 687 VAAVSAWTSTRTPVQAAGALQAAGVAAGPMHRPSDILEDPQLIERNLFRDMVHPLIARPL 746 Query 721 PAETGPAPFRHIPQAPQRPAPLPGQDSVQICRKLLGMTADETERLINERVMFGPAVTA 778 PAETGPAPFRHIPQAPQRPAPLPGQDSVQICRKLLGMTADETERLINERVMFGPAVTA Sbjct 747 PAETGPAPFRHIPQAPQRPAPLPGQDSVQICRKLLGMTADETERLINERVMFGPAVTA 804 >gi|254232044|ref|ZP_04925371.1| conserved hypothetical protein [Mycobacterium tuberculosis C] gi|124601103|gb|EAY60113.1| conserved hypothetical protein [Mycobacterium tuberculosis C] Length=804 Score = 1563 bits (4048), Expect = 0.0, Method: Compositional matrix adjust. Identities = 776/778 (99%), Positives = 778/778 (100%), Gaps = 0/778 (0%) Query 1 MVTRLLADLGADVLKVEPPGGSPGRHVRPTLAGTSIGFAMHNANKRSAVLNPLDESDRRR 60 MVTRLLADLGADVLKVEPPGGSPGRHVRPTLAGTSIGFAMHNANKRSAVLNPLDESDRRR Sbjct 27 MVTRLLADLGADVLKVEPPGGSPGRHVRPTLAGTSIGFAMHNANKRSAVLNPLDESDRRR 86 Query 61 FLDLAASADIVVDCGLPGQAAAYGASCAELADRYRHLVALSITDFGAAGPRSSWRATDPV 120 FLDLAASADIVVDCGLPGQAAAYGASCAELADRYRHLVALSITDFGAAGPRSSWRATDPV Sbjct 87 FLDLAASADIVVDCGLPGQAAAYGASCAELADRYRHLVALSITDFGAAGPRSSWRATDPV 146 Query 121 LYAMSGALSRSGPTAGTPVLPPDGIASATAAVQAAWAVLVAYFNRLRCGTGDYIDFSRFD 180 LYAMSGALSRSGPTAGTPVLPPDGIASATAAVQAAWAVLVAYFNRLRCGTGDYIDFSRFD Sbjct 147 LYAMSGALSRSGPTAGTPVLPPDGIASATAAVQAAWAVLVAYFNRLRCGTGDYIDFSRFD 206 Query 181 AVVMALDPPFGAHGQVAAGIRSTGRWRGRPKNQDAYPIYPCRDGYVRFCVMAPRQWRGLR 240 AVV+ALDPPFGAHGQVAAGIRSTGRWRGRPKNQDAYPIYPCRDGYVRFCVMAPRQWRGLR Sbjct 207 AVVLALDPPFGAHGQVAAGIRSTGRWRGRPKNQDAYPIYPCRDGYVRFCVMAPRQWRGLR 266 Query 241 RWLGEPEDFQDPKYDVIGARLAAWPQISVLVAKLCAEKTMKELVAAGQALGVPITAVLTP 300 RWLGEPEDFQDPKYDVIGARLAAWPQISVLVAKLCAEKTMKELVAAGQALGVPITAVLTP Sbjct 267 RWLGEPEDFQDPKYDVIGARLAAWPQISVLVAKLCAEKTMKELVAAGQALGVPITAVLTP 326 Query 301 SRILASEHFQAVGAITDAELVPGVRTGVPTGYFVVDGKRAGFRTPAPAAGQDEPRWLADP 360 SRILASEHFQAVGAITDAELVPGVRTGVPTGYFVVDGKRAGFRTPAPAAGQDEPRWLADP Sbjct 327 SRILASEHFQAVGAITDAELVPGVRTGVPTGYFVVDGKRAGFRTPAPAAGQDEPRWLADP 386 Query 361 APVPPPSGRVGGYPFEGLRILDLGIIVAGGELSRLFGDLGAEVIKVESADHPDGLRQTRV 420 APVPPPSGRVGGYPFEGLRILDLGIIVAGGELSRLFGDLGAEVIKVESADHPDGLRQTRV Sbjct 387 APVPPPSGRVGGYPFEGLRILDLGIIVAGGELSRLFGDLGAEVIKVESADHPDGLRQTRV 446 Query 421 GDAMSESFAWTHRNHLALGLDLRNSEGKAIFGRLVAESDAVFANFKPGTLTSLGFSYDVL 480 GDAMSESFAWTHRNHLALGLDLRNSEGKAIFGRLVAESDAVFANFKPGTLTSLGFSYDVL Sbjct 447 GDAMSESFAWTHRNHLALGLDLRNSEGKAIFGRLVAESDAVFANFKPGTLTSLGFSYDVL 506 Query 481 HAFNPRIVLAGSSAFGNRGPWSTRMGYGPLVRAATGVTRVWTSDEAQPDNSRHPFYDATT 540 HAFNPRIVLAGSSAFGNRGPWSTRMGYGPLVRAATGVTRVWTSDEAQPDNSRHPFYDATT Sbjct 507 HAFNPRIVLAGSSAFGNRGPWSTRMGYGPLVRAATGVTRVWTSDEAQPDNSRHPFYDATT 566 Query 541 IFPDHVVGRVGALLALAALIHRDRTGGGAHVHISQAEVVVNQLDTMFVAEAARATDVAEI 600 IFPDHVVGRVGALLALAALIHRDRTGGGAHVHISQAEVVVNQLDTMFVAEAARATDVAEI Sbjct 567 IFPDHVVGRVGALLALAALIHRDRTGGGAHVHISQAEVVVNQLDTMFVAEAARATDVAEI 626 Query 601 HPDTSVHAVYPCAGDDEWCVISIRSDDEWRRATSVFGQPELANDPRFGASRSRVANRSEL 660 HPDTSVHAVYPCAGDDEWCVISIRSDDEWRRATSVFGQPELANDPRFGASRSRVANRSEL Sbjct 627 HPDTSVHAVYPCAGDDEWCVISIRSDDEWRRATSVFGQPELANDPRFGASRSRVANRSEL 686 Query 661 VAAVSAWTSTRTPVQAAGALQAAGVAAGPMNRPSDILEDPQLIERNLFRDMVHPLIARPL 720 VAAVSAWTSTRTPVQAAGALQAAGVAAGPM+RPSDILEDPQLIERNLFRDMVHPLIARPL Sbjct 687 VAAVSAWTSTRTPVQAAGALQAAGVAAGPMHRPSDILEDPQLIERNLFRDMVHPLIARPL 746 Query 721 PAETGPAPFRHIPQAPQRPAPLPGQDSVQICRKLLGMTADETERLINERVMFGPAVTA 778 PAETGPAPFRHIPQAPQRPAPLPGQDSVQICRKLLGMTADETERLINERVMFGPAVTA Sbjct 747 PAETGPAPFRHIPQAPQRPAPLPGQDSVQICRKLLGMTADETERLINERVMFGPAVTA 804 >gi|183982751|ref|YP_001851042.1| acyl-CoA transferase/dehydratase [Mycobacterium marinum M] gi|183176077|gb|ACC41187.1| acyl-CoA transferase/dehydratase [Mycobacterium marinum M] Length=812 Score = 1260 bits (3260), Expect = 0.0, Method: Compositional matrix adjust. Identities = 621/777 (80%), Positives = 676/777 (88%), Gaps = 0/777 (0%) Query 2 VTRLLADLGADVLKVEPPGGSPGRHVRPTLAGTSIGFAMHNANKRSAVLNPLDESDRRRF 61 V RLLADLGADVLKVEPPGGSPGR+ PTLAG SI FA+HNANKRS VL+P D +DR R Sbjct 22 VARLLADLGADVLKVEPPGGSPGRNQAPTLAGASIPFAVHNANKRSVVLDPNDAADRARL 81 Query 62 LDLAASADIVVDCGLPGQAAAYGASCAELADRYRHLVALSITDFGAAGPRSSWRATDPVL 121 L+LAA ADI+VD GLPGQA++YG SC ELADR HLV LS TDFGA+GPRSSWRATD VL Sbjct 82 LELAAGADILVDSGLPGQASSYGTSCVELADRCPHLVVLSFTDFGASGPRSSWRATDAVL 141 Query 122 YAMSGALSRSGPTAGTPVLPPDGIASATAAVQAAWAVLVAYFNRLRCGTGDYIDFSRFDA 181 YAMSG+LSRSGPT GTPVLPPDGIASATAAVQA W+VL AY+N+LRCGTGDYIDFSRFDA Sbjct 142 YAMSGSLSRSGPTTGTPVLPPDGIASATAAVQATWSVLAAYYNKLRCGTGDYIDFSRFDA 201 Query 182 VVMALDPPFGAHGQVAAGIRSTGRWRGRPKNQDAYPIYPCRDGYVRFCVMAPRQWRGLRR 241 VVMALDP FGAHGQVAAGIRS+ RWRGRPKNQDAYPIYPC+DGYVR CVMAPRQWRGLRR Sbjct 202 VVMALDPAFGAHGQVAAGIRSSARWRGRPKNQDAYPIYPCQDGYVRLCVMAPRQWRGLRR 261 Query 242 WLGEPEDFQDPKYDVIGARLAAWPQISVLVAKLCAEKTMKELVAAGQALGVPITAVLTPS 301 WLGEP DFQDPKYDVIGAR AAWPQIS LVA L A +TMKELVAAGQA GVPI AVLTPS Sbjct 262 WLGEPPDFQDPKYDVIGARFAAWPQISELVAALFAPQTMKELVAAGQAHGVPIAAVLTPS 321 Query 302 RILASEHFQAVGAITDAELVPGVRTGVPTGYFVVDGKRAGFRTPAPAAGQDEPRWLADPA 361 RILASEHFQAVGAIT+AELVPGV T VPTGYFVV+ +RAGF TPAPA GQD+PRWLA PA Sbjct 322 RILASEHFQAVGAITEAELVPGVHTKVPTGYFVVNEQRAGFHTPAPAVGQDQPRWLAGPA 381 Query 362 PVPPPSGRVGGYPFEGLRILDLGIIVAGGELSRLFGDLGAEVIKVESADHPDGLRQTRVG 421 P + VGG P EGLRILDLGIIVAGGELSRLFGDLGAEVIKVESAD+PDGLRQ R G Sbjct 382 PELASTASVGGCPLEGLRILDLGIIVAGGELSRLFGDLGAEVIKVESADYPDGLRQARAG 441 Query 422 DAMSESFAWTHRNHLALGLDLRNSEGKAIFGRLVAESDAVFANFKPGTLTSLGFSYDVLH 481 DAMSESFAWTHRNH ALGLDLR+ EGK IFGRLVA +DAVFANFKPGTLTSLGF+Y LH Sbjct 442 DAMSESFAWTHRNHRALGLDLRSPEGKQIFGRLVAAADAVFANFKPGTLTSLGFNYANLH 501 Query 482 AFNPRIVLAGSSAFGNRGPWSTRMGYGPLVRAATGVTRVWTSDEAQPDNSRHPFYDATTI 541 A NP IVLAGSSAFGNRGPWSTR+GYGPLVRA TGVTRVWTS++A D SRH FYDATTI Sbjct 502 ALNPHIVLAGSSAFGNRGPWSTRLGYGPLVRATTGVTRVWTSEDAATDGSRHAFYDATTI 561 Query 542 FPDHVVGRVGALLALAALIHRDRTGGGAHVHISQAEVVVNQLDTMFVAEAARATDVAEIH 601 FPDHVVGR+ A+LALAALIHR RTG GAHVHISQAEVVVNQLDT+FV EAA A +AE+ Sbjct 562 FPDHVVGRIVAVLALAALIHRHRTGAGAHVHISQAEVVVNQLDTLFVTEAALAAGIAEVR 621 Query 602 PDTSVHAVYPCAGDDEWCVISIRSDDEWRRATSVFGQPELANDPRFGASRSRVANRSELV 661 D SVHAV PCAGDDEWCV++I SD+EWR A + QPELA+DPRF ++ SR+ANR+ELV Sbjct 622 NDLSVHAVCPCAGDDEWCVVTICSDNEWRCAAKLIDQPELADDPRFASAESRMANRAELV 681 Query 662 AAVSAWTSTRTPVQAAGALQAAGVAAGPMNRPSDILEDPQLIERNLFRDMVHPLIARPLP 721 A VSAWT+ TP +AA ALQAAG+AAGPMNRP D+LEDPQLI RNLFRDM HPLIARPLP Sbjct 682 AVVSAWTADHTPFEAAQALQAAGIAAGPMNRPPDLLEDPQLIARNLFRDMTHPLIARPLP 741 Query 722 AETGPAPFRHIPQAPQRPAPLPGQDSVQICRKLLGMTADETERLINERVMFGPAVTA 778 AETGPAPFRHIPQ+PQRPAP PGQD+ +IC +LL M+ +E E LI E V+F P+ + Sbjct 742 AETGPAPFRHIPQSPQRPAPQPGQDTREICAELLDMSPEEIEFLITEGVLFAPSANS 798 >gi|240170501|ref|ZP_04749160.1| acyl-CoA transferase/dehydratase [Mycobacterium kansasii ATCC 12478] Length=797 Score = 1201 bits (3108), Expect = 0.0, Method: Compositional matrix adjust. Identities = 628/776 (81%), Positives = 674/776 (87%), Gaps = 0/776 (0%) Query 2 VTRLLADLGADVLKVEPPGGSPGRHVRPTLAGTSIGFAMHNANKRSAVLNPLDESDRRRF 61 VTRLLADLGADVLKVE PGGSPGR V PTLAGT I FA+HNANKRSAVLNPLDE RRRF Sbjct 22 VTRLLADLGADVLKVEAPGGSPGRGVPPTLAGTGIPFAVHNANKRSAVLNPLDEQHRRRF 81 Query 62 LDLAASADIVVDCGLPGQAAAYGASCAELADRYRHLVALSITDFGAAGPRSSWRATDPVL 121 +L ASADIVVD GLPG AAAYG +CAELADR+ HLVALS TDFG +GPRSSWRATDPVL Sbjct 82 DELTASADIVVDSGLPGAAAAYGTTCAELADRHPHLVALSFTDFGTSGPRSSWRATDPVL 141 Query 122 YAMSGALSRSGPTAGTPVLPPDGIASATAAVQAAWAVLVAYFNRLRCGTGDYIDFSRFDA 181 YAMSG+LSRSGPT GTPVLPPDGIASATAAVQAAWAVLVAY+NRLRCG GDYIDFSRFDA Sbjct 142 YAMSGSLSRSGPTTGTPVLPPDGIASATAAVQAAWAVLVAYYNRLRCGAGDYIDFSRFDA 201 Query 182 VVMALDPPFGAHGQVAAGIRSTGRWRGRPKNQDAYPIYPCRDGYVRFCVMAPRQWRGLRR 241 +VMALDP FGAHGQVAAGIRS+ RWRGRPKNQDAYPIYPC+DGYVR CVMAPRQWRGLRR Sbjct 202 LVMALDPAFGAHGQVAAGIRSSARWRGRPKNQDAYPIYPCQDGYVRLCVMAPRQWRGLRR 261 Query 242 WLGEPEDFQDPKYDVIGARLAAWPQISVLVAKLCAEKTMKELVAAGQALGVPITAVLTPS 301 WLGEP+DFQDP+YDVIGAR AAWPQISVLVA L A +TMKELVAAGQA GVPI AVLTPS Sbjct 262 WLGEPQDFQDPRYDVIGARFAAWPQISVLVAALFAGQTMKELVAAGQAHGVPIAAVLTPS 321 Query 302 RILASEHFQAVGAITDAELVPGVRTGVPTGYFVVDGKRAGFRTPAPAAGQDEPRWLADPA 361 RILASEHFQAVGAITDAELVPGV VPTGYF V+ +RAGFR PAP AGQ EP WLADP Sbjct 322 RILASEHFQAVGAITDAELVPGVHAQVPTGYFTVNEQRAGFRAPAPTAGQHEPGWLADPV 381 Query 362 PVPPPSGRVGGYPFEGLRILDLGIIVAGGELSRLFGDLGAEVIKVESADHPDGLRQTRVG 421 P PPP GRVG YPF GLRILDLGIIVAGGELSRLFGDLGAEVIKVESAD+PDGLRQ R G Sbjct 382 PAPPPVGRVGDYPFAGLRILDLGIIVAGGELSRLFGDLGAEVIKVESADYPDGLRQARAG 441 Query 422 DAMSESFAWTHRNHLALGLDLRNSEGKAIFGRLVAESDAVFANFKPGTLTSLGFSYDVLH 481 DAMSESFAWTHRNH A G+DLR +EGK IFG+LVAE+DAVFANFKPGTLTSLGF+YD L Sbjct 442 DAMSESFAWTHRNHRAFGVDLRRNEGKHIFGQLVAEADAVFANFKPGTLTSLGFNYDKLR 501 Query 482 AFNPRIVLAGSSAFGNRGPWSTRMGYGPLVRAATGVTRVWTSDEAQPDNSRHPFYDATTI 541 NP IVLAGSSAFGNRGPWS R+GYGPLVRA TGVT VWTS+EA D +RHPFYDATTI Sbjct 502 GLNPGIVLAGSSAFGNRGPWSRRLGYGPLVRATTGVTSVWTSEEAPKDGARHPFYDATTI 561 Query 542 FPDHVVGRVGALLALAALIHRDRTGGGAHVHISQAEVVVNQLDTMFVAEAARATDVAEIH 601 FPDHVVGRV A+LALAALIHRDRTG GAHVH+SQAEVVVNQLDT+FV EAARA AEI Sbjct 562 FPDHVVGRVVAILALAALIHRDRTGAGAHVHVSQAEVVVNQLDTLFVTEAARAAGAAEIR 621 Query 602 PDTSVHAVYPCAGDDEWCVISIRSDDEWRRATSVFGQPELANDPRFGASRSRVANRSELV 661 D SVHAV PCAGDDEWCVISIRSDDEWR A VF +PELA D RF + +R ANR+EL Sbjct 622 DDISVHAVCPCAGDDEWCVISIRSDDEWRCAALVFDKPELAEDLRFATAEARRANRAELS 681 Query 662 AAVSAWTSTRTPVQAAGALQAAGVAAGPMNRPSDILEDPQLIERNLFRDMVHPLIARPLP 721 A ++AWTST +P QAA +Q+AG+AAGPMNRP D+LEDPQL ER LF MVHPLIAR +P Sbjct 682 AVLAAWTSTHSPEQAARLMQSAGLAAGPMNRPPDLLEDPQLAERQLFSTMVHPLIARQMP 741 Query 722 AETGPAPFRHIPQAPQRPAPLPGQDSVQICRKLLGMTADETERLINERVMFGPAVT 777 AETGPAPFRHIP APQRPAP GQD+ IC++LLGM+ + E+LI E V+F A T Sbjct 742 AETGPAPFRHIPHAPQRPAPQAGQDTRAICQELLGMSPEHIEQLIAEGVLFAAAGT 797 >gi|296164864|ref|ZP_06847420.1| caib/baif family protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295899706|gb|EFG79156.1| caib/baif family protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=797 Score = 1179 bits (3051), Expect = 0.0, Method: Compositional matrix adjust. Identities = 584/775 (76%), Positives = 651/775 (84%), Gaps = 2/775 (0%) Query 2 VTRLLADLGADVLKVEPPGGSPGRHVRPTLAGTSIGFAMHNANKRSAVLNPLDESDRRRF 61 VTRL ADLGADVLKVEPP GSP R PTLAG SI FA+HNANKRS VL+P DE D F Sbjct 22 VTRLFADLGADVLKVEPPSGSPARAAAPTLAGASIPFAVHNANKRSVVLDPFDEDDCEVF 81 Query 62 LDLAASADIVVDCGLPGQAAAYGASCAELADRYRHLVALSITDFGAAGPRSSWRATDPVL 121 LDLA ADIVVD G G+A +G S ELA ++ HLV LSITDFGA GPRS WRATDPVL Sbjct 82 LDLAGQADIVVDDGFYGEAPTFGTSVEELAAQHPHLVVLSITDFGATGPRSLWRATDPVL 141 Query 122 YAMSGALSRSGPTAGTPVLPPDGIASATAAVQAAWAVLVAYFNRLRCGTGDYIDFSRFDA 181 YAM GALSRSGPT GTPVLPPDGIASATAAVQ AWA LVAY+NRLRCGTG+YIDFSRFDA Sbjct 142 YAMCGALSRSGPTTGTPVLPPDGIASATAAVQGAWAALVAYYNRLRCGTGEYIDFSRFDA 201 Query 182 VVMALDPPFGAHGQVAAGIRSTGRWRGRPKNQDAYPIYPCRDGYVRFCVMAPRQWRGLRR 241 VVM+LDP FGAHGQVAAGIR G+WRGRPKNQDAYPIY C+DGYVR CVMAPRQWRGLRR Sbjct 202 VVMSLDPAFGAHGQVAAGIRRAGQWRGRPKNQDAYPIYECKDGYVRLCVMAPRQWRGLRR 261 Query 242 WLGEPEDFQDPKYDVIGARLAAWPQISVLVAKLCAEKTMKELVAAGQALGVPITAVLTPS 301 WLGEP+DFQDPKYDVIGAR AAWPQIS L+ L A +TMK+LVA GQA GVPI AVLTPS Sbjct 262 WLGEPDDFQDPKYDVIGARFAAWPQISELIQALFAGQTMKDLVAEGQAHGVPIAAVLTPS 321 Query 302 RILASEHFQAVGAITDAELVPGVRTGVPTGYFVVDGKRAGFRTPAPAAGQDEPRWLADPA 361 + SEHF+ VGAITDAELVPGVR VPTGYFVVDG+ AGFRTPAPAAGQD P W +PA Sbjct 322 WAMTSEHFRGVGAITDAELVPGVRAAVPTGYFVVDGRHAGFRTPAPAAGQDGPGWRGNPA 381 Query 362 PVPPPSGRVGGYPFEGLRILDLGIIVAGGELSRLFGDLGAEVIKVESADHPDGLRQTRVG 421 V PSGRVG YPF GLRILDLGIIVAGGELSRLFGDLGAEVIK+ESAD+PDGLRQ RVG Sbjct 382 VVSSPSGRVGEYPFAGLRILDLGIIVAGGELSRLFGDLGAEVIKIESADYPDGLRQARVG 441 Query 422 DAMSESFAWTHRNHLALGLDLRNSEGKAIFGRLVAESDAVFANFKPGTLTSLGFSYDVLH 481 +AMSESFAWTHRNHL +GLDLR++ GK IF RLVAESDAVFANFKPGTLT+LGFSYD L Sbjct 442 EAMSESFAWTHRNHLGMGLDLRSAAGKEIFTRLVAESDAVFANFKPGTLTALGFSYDNLR 501 Query 482 AFNPRIVLAGSSAFGNRGPWSTRMGYGPLVRAATGVTRVWTSD--EAQPDNSRHPFYDAT 539 A NPRIVLA SSA+G++GPWS R+GYGPLVRAATGVTR+WT+D E++ +RH FYDAT Sbjct 502 AANPRIVLAESSAYGDQGPWSARLGYGPLVRAATGVTRLWTADDPESRDGAARHAFYDAT 561 Query 540 TIFPDHVVGRVGALLALAALIHRDRTGGGAHVHISQAEVVVNQLDTMFVAEAARATDVAE 599 T+FPDHVVGR+ A+ AL+ALIHR RTGGG+HVHISQAEVV+NQLDT++V +AA A V Sbjct 562 TVFPDHVVGRITAIAALSALIHRHRTGGGSHVHISQAEVVINQLDTLYVTQAAAAAGVPR 621 Query 600 IHPDTSVHAVYPCAGDDEWCVISIRSDDEWRRATSVFGQPELANDPRFGASRSRVANRSE 659 I DTS+HAVYPCAGDDEWCVISI SD+EWR A VF E A+DPRF +R+ANR E Sbjct 622 IADDTSLHAVYPCAGDDEWCVISIGSDEEWRCAAGVFDHHEWADDPRFATGEARLANRRE 681 Query 660 LVAAVSAWTSTRTPVQAAGALQAAGVAAGPMNRPSDILEDPQLIERNLFRDMVHPLIARP 719 LV V+AWT RTPV+AA LQ++GVAAGPMNRP DILEDPQL+ER L+ +M HPL+ R Sbjct 682 LVELVAAWTRKRTPVRAAQLLQSSGVAAGPMNRPPDILEDPQLLERKLYAEMRHPLVERT 741 Query 720 LPAETGPAPFRHIPQAPQRPAPLPGQDSVQICRKLLGMTADETERLINERVMFGP 774 LPAET PAPF+HIP+APQRPAPLPGQD+V +CR++LG+ E +RLI + +FGP Sbjct 742 LPAETAPAPFQHIPRAPQRPAPLPGQDTVDVCRRVLGIGPQEIDRLIGDGTLFGP 796 Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 80/330 (25%), Positives = 132/330 (40%), Gaps = 24/330 (7%) Query 375 FEGLRILDLGIIVAGGELSRLFGDLGAEVIKVESADHPDGLRQTRVGDAMSESFAWTHRN 434 + +R+LDL G ++RLF DLGA+V+KVE S FA + N Sbjct 6 LDAVRVLDLSS-GNGDAVTRLFADLGADVLKVEPPSGSPARAAAPTLAGASIPFAVHNAN 64 Query 435 HLALGLDLRNSEGKAIFGRLVAESDAVFANFKPGTLTSLGFSYDVLHAFNPRIVLAGSSA 494 ++ LD + + +F L ++D V + G + G S + L A +P +V+ + Sbjct 65 KRSVVLDPFDEDDCEVFLDLAGQADIVVDDGFYGEAPTFGTSVEELAAQHPHLVVLSITD 124 Query 495 FGNRGPWSTRMGYGPLVRAATGVTRVWTSDEAQPDNSRHPFYDATTIFPDHVVGRV---- 550 FG GP S P++ A G + P + PD + Sbjct 125 FGATGPRSLWRATDPVLYAMCGAL-----------SRSGPTTGTPVLPPDGIASATAAVQ 173 Query 551 GALLALAALIHRDRTGGGAHVHISQAEVVVNQLDTMFVAEAARATDVAEIH------PDT 604 GA AL A +R R G G ++ S+ + VV LD F A A + + Sbjct 174 GAWAALVAYYNRLRCGTGEYIDFSRFDAVVMSLDPAFGAHGQVAAGIRRAGQWRGRPKNQ 233 Query 605 SVHAVYPCAGDDEWCVISIRSDDEWRRATSVFGQPELANDPRFGASRSRVANRSELVAAV 664 + +Y C D + + + + +WR G+P+ DP++ +R A ++ + Sbjct 234 DAYPIYEC--KDGYVRLCVMAPRQWRGLRRWLGEPDDFQDPKYDVIGARFAAWPQISELI 291 Query 665 SAWTSTRTPVQAAGALQAAGVAAGPMNRPS 694 A + +T QA GV + PS Sbjct 292 QALFAGQTMKDLVAEGQAHGVPIAAVLTPS 321 >gi|336457513|gb|EGO36519.1| putative acyl-CoA transferase/carnitine dehydratase [Mycobacterium avium subsp. paratuberculosis S397] Length=814 Score = 1169 bits (3023), Expect = 0.0, Method: Compositional matrix adjust. Identities = 607/776 (79%), Positives = 659/776 (85%), Gaps = 2/776 (0%) Query 2 VTRLLADLGADVLKVEPPGGSPGRHVRPTLAGTSIGFAMHNANKRSAVLNPLDESDRRRF 61 VTRL ADLGADVLKVEPPGG GR PTL G SI FA+HNANKRS VL+P D+ D RF Sbjct 24 VTRLFADLGADVLKVEPPGGCLGRDALPTLRGASIPFAVHNANKRSTVLDPFDDEDCARF 83 Query 62 LDLAASADIVVDCGLPGQAAAYGASCAELADRYRHLVALSITDFGAAGPRSSWRATDPVL 121 LDLAA ADIVVD G+ + A +G S ELA RY HLV LSITDFGA GPRSSWRATDPVL Sbjct 84 LDLAADADIVVDTGVDERGAMFGTSAEELAARYPHLVVLSITDFGATGPRSSWRATDPVL 143 Query 122 YAMSGALSRSGPTAGTPVLPPDGIASATAAVQAAWAVLVAYFNRLRCGTGDYIDFSRFDA 181 YAM GALSRSGPT GTPVLPPDGIASATAAVQAAWA L AY+NRLRCGTGDYIDFS FDA Sbjct 144 YAMCGALSRSGPTTGTPVLPPDGIASATAAVQAAWAALAAYYNRLRCGTGDYIDFSWFDA 203 Query 182 VVMALDPPFGAHGQVAAGIRSTGRWRGRPKNQDAYPIYPCRDGYVRFCVMAPRQWRGLRR 241 VVMALDP FGAHGQ AAGIR +GRWRGRPKNQDAYPIYPC+DGYVR CVMAPRQW GLRR Sbjct 204 VVMALDPAFGAHGQAAAGIRRSGRWRGRPKNQDAYPIYPCQDGYVRLCVMAPRQWHGLRR 263 Query 242 WLGEPEDFQDPKYDVIGARLAAWPQISVLVAKLCAEKTMKELVAAGQALGVPITAVLTPS 301 WLGEPEDFQDPKYDVIGAR A WPQIS L+ KL A +TMK+LVAAGQA GVPI AVLTPS Sbjct 264 WLGEPEDFQDPKYDVIGARFAVWPQISELLQKLFAGQTMKDLVAAGQAHGVPIAAVLTPS 323 Query 302 RILASEHFQAVGAITDAELVPGVRTGVPTGYFVVDGKRAGFRTPAPAAGQDEPRWLADPA 361 +IL S+HFQAVGAITDAELVPGV T VP+GYFVVDG+RAGFR P PAAGQDEP W P+ Sbjct 324 QILGSDHFQAVGAITDAELVPGVHTAVPSGYFVVDGRRAGFRAPVPAAGQDEPYWRGAPS 383 Query 362 PVPPPSGRVGGYPFEGLRILDLGIIVAGGELSRLFGDLGAEVIKVESADHPDGLRQTRVG 421 VP P+GR+G +PF GLRILDLGIIVAGGELSRLFGDLGA+VIKVESAD+PDGLRQ R G Sbjct 384 VVPSPAGRLGDHPFAGLRILDLGIIVAGGELSRLFGDLGADVIKVESADYPDGLRQARAG 443 Query 422 DAMSESFAWTHRNHLALGLDLRNSEGKAIFGRLVAESDAVFANFKPGTLTSLGFSYDVLH 481 +AMSESFAWTHRN+ ALGLDLR+++GK IF RLVAE+DAVFANFKPGTL +LGFSY+ L Sbjct 444 EAMSESFAWTHRNNRALGLDLRSAQGKTIFARLVAEADAVFANFKPGTLAALGFSYEQLR 503 Query 482 AFNPRIVLAGSSAFGNRGPWSTRMGYGPLVRAATGVTRVWTSDEAQP--DNSRHPFYDAT 539 A NPRIVLA SSAFG+ GPWSTRMGYGPLVRA TGVTR+WTSD+A+ D+ RH FYDAT Sbjct 504 AINPRIVLAESSAFGDTGPWSTRMGYGPLVRATTGVTRLWTSDDAREHDDDGRHAFYDAT 563 Query 540 TIFPDHVVGRVGALLALAALIHRDRTGGGAHVHISQAEVVVNQLDTMFVAEAARATDVAE 599 TIFPDHVVGRV A+ ALAALIHRDR G GAHVHISQAEVVVNQLDT++V +AA A VA+ Sbjct 564 TIFPDHVVGRVTAIAALAALIHRDRAGAGAHVHISQAEVVVNQLDTLYVTQAALAAGVAQ 623 Query 600 IHPDTSVHAVYPCAGDDEWCVISIRSDDEWRRATSVFGQPELANDPRFGASRSRVANRSE 659 I PDT +HAVYPCAGDDEWCVISIRSDDEWRRA SVF E A+DPRFG + +R+A+R E Sbjct 624 IRPDTGLHAVYPCAGDDEWCVISIRSDDEWRRAASVFDHAEWADDPRFGTAEARLAHRRE 683 Query 660 LVAAVSAWTSTRTPVQAAGALQAAGVAAGPMNRPSDILEDPQLIERNLFRDMVHPLIARP 719 LV VSAWT TRTPV+AA LQAA V AGPMNRP DILEDPQLI RNL+R M HPLI P Sbjct 684 LVELVSAWTRTRTPVRAAELLQAAAVPAGPMNRPPDILEDPQLIARNLYRPMRHPLIDNP 743 Query 720 LPAETGPAPFRHIPQAPQRPAPLPGQDSVQICRKLLGMTADETERLINERVMFGPA 775 LPAETGPAPFRHIP A Q PAPLPGQD+V IC LLGM + RLI+ERV+FGPA Sbjct 744 LPAETGPAPFRHIPPARQAPAPLPGQDTVAICCDLLGMNTADIRRLIDERVLFGPA 799 >gi|254775328|ref|ZP_05216844.1| caib/baif family protein [Mycobacterium avium subsp. avium ATCC 25291] Length=814 Score = 1168 bits (3021), Expect = 0.0, Method: Compositional matrix adjust. Identities = 606/776 (79%), Positives = 659/776 (85%), Gaps = 2/776 (0%) Query 2 VTRLLADLGADVLKVEPPGGSPGRHVRPTLAGTSIGFAMHNANKRSAVLNPLDESDRRRF 61 VTRL ADLGADVLKVEPPGG GR PTL G SI FA+HNANKRS VL+P D+ D RF Sbjct 24 VTRLFADLGADVLKVEPPGGCLGRDALPTLRGASIPFAVHNANKRSTVLDPFDDEDCARF 83 Query 62 LDLAASADIVVDCGLPGQAAAYGASCAELADRYRHLVALSITDFGAAGPRSSWRATDPVL 121 LDLAA ADIVVD G+ + A +G S ELA RY HLV LSITDFGA GPRSSWRATDPVL Sbjct 84 LDLAADADIVVDTGVDERGAMFGTSAEELAARYPHLVVLSITDFGATGPRSSWRATDPVL 143 Query 122 YAMSGALSRSGPTAGTPVLPPDGIASATAAVQAAWAVLVAYFNRLRCGTGDYIDFSRFDA 181 YAM GALSRSGPT GTPVLPPDGIASATAAVQAAWA L AY+NRLRCGTGDYIDFS FDA Sbjct 144 YAMCGALSRSGPTTGTPVLPPDGIASATAAVQAAWAALAAYYNRLRCGTGDYIDFSWFDA 203 Query 182 VVMALDPPFGAHGQVAAGIRSTGRWRGRPKNQDAYPIYPCRDGYVRFCVMAPRQWRGLRR 241 VVMALDP FGAHGQ AAGIR +GRWRGRPKNQDAYPIYPC+DGYVR CVMAPRQW GLRR Sbjct 204 VVMALDPAFGAHGQAAAGIRRSGRWRGRPKNQDAYPIYPCQDGYVRLCVMAPRQWHGLRR 263 Query 242 WLGEPEDFQDPKYDVIGARLAAWPQISVLVAKLCAEKTMKELVAAGQALGVPITAVLTPS 301 WLGEPEDFQDPKYDVIGAR A WPQIS L+ KL A +TMK+LVAAGQA GVPI AVLTPS Sbjct 264 WLGEPEDFQDPKYDVIGARFAVWPQISELLQKLFAGQTMKDLVAAGQAHGVPIAAVLTPS 323 Query 302 RILASEHFQAVGAITDAELVPGVRTGVPTGYFVVDGKRAGFRTPAPAAGQDEPRWLADPA 361 +IL S+HFQAVGAITDAELVPGV T VP+GYFVVDG+RAGFR P PAAGQDEP W P+ Sbjct 324 QILGSDHFQAVGAITDAELVPGVHTAVPSGYFVVDGRRAGFRAPVPAAGQDEPYWRGAPS 383 Query 362 PVPPPSGRVGGYPFEGLRILDLGIIVAGGELSRLFGDLGAEVIKVESADHPDGLRQTRVG 421 VP P+GR+G +PF GLRILDLGIIVAGGELSRLFGDLGA+VIKVESAD+PDGLRQ R G Sbjct 384 VVPSPAGRLGDHPFAGLRILDLGIIVAGGELSRLFGDLGADVIKVESADYPDGLRQARAG 443 Query 422 DAMSESFAWTHRNHLALGLDLRNSEGKAIFGRLVAESDAVFANFKPGTLTSLGFSYDVLH 481 +AM ESFAWTHRN+ ALGLDLR+++GK IF RLVAE+DAVFANFKPGTL +LGFSY+ L Sbjct 444 EAMGESFAWTHRNNRALGLDLRSAQGKTIFARLVAEADAVFANFKPGTLAALGFSYEQLR 503 Query 482 AFNPRIVLAGSSAFGNRGPWSTRMGYGPLVRAATGVTRVWTSDEAQP--DNSRHPFYDAT 539 A NPRIVLA SSAFG+ GPWSTRMGYGPLVRA TGVTR+WTSD+A+ D+ RH FYDAT Sbjct 504 AINPRIVLAESSAFGDTGPWSTRMGYGPLVRATTGVTRLWTSDDAREHDDDGRHAFYDAT 563 Query 540 TIFPDHVVGRVGALLALAALIHRDRTGGGAHVHISQAEVVVNQLDTMFVAEAARATDVAE 599 TIFPDHVVGRV A+ ALAALIHRDR G GAHVHISQAEVVVNQLDT++V +AA A VA+ Sbjct 564 TIFPDHVVGRVTAIAALAALIHRDRAGAGAHVHISQAEVVVNQLDTLYVTQAALAAGVAQ 623 Query 600 IHPDTSVHAVYPCAGDDEWCVISIRSDDEWRRATSVFGQPELANDPRFGASRSRVANRSE 659 I PDT +HAVYPCAGDDEWCVISIRSDDEWRRA SVF E A+DPRFG + +R+A+R E Sbjct 624 IRPDTGLHAVYPCAGDDEWCVISIRSDDEWRRAASVFDHAEWADDPRFGTAEARLAHRRE 683 Query 660 LVAAVSAWTSTRTPVQAAGALQAAGVAAGPMNRPSDILEDPQLIERNLFRDMVHPLIARP 719 LV VSAWT TRTPV+AA LQAA V AGPMNRP +ILEDPQLI RNL+R M HPLI P Sbjct 684 LVELVSAWTRTRTPVRAAELLQAAAVPAGPMNRPPEILEDPQLIARNLYRPMRHPLIDNP 743 Query 720 LPAETGPAPFRHIPQAPQRPAPLPGQDSVQICRKLLGMTADETERLINERVMFGPA 775 LPAETGPAPFRHIP A Q PAPLPGQD+V ICR LLGM + RLI+ERV+FGPA Sbjct 744 LPAETGPAPFRHIPPARQAPAPLPGQDTVAICRDLLGMNTADIRRLIDERVLFGPA 799 >gi|41407674|ref|NP_960510.1| hypothetical protein MAP1576 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41396027|gb|AAS03893.1| hypothetical protein MAP_1576 [Mycobacterium avium subsp. paratuberculosis K-10] Length=814 Score = 1167 bits (3020), Expect = 0.0, Method: Compositional matrix adjust. Identities = 607/776 (79%), Positives = 659/776 (85%), Gaps = 2/776 (0%) Query 2 VTRLLADLGADVLKVEPPGGSPGRHVRPTLAGTSIGFAMHNANKRSAVLNPLDESDRRRF 61 VTRL ADLGADVLKVEPPGG GR PTL G SI FA+HNANKRS VL+P D+ D RF Sbjct 24 VTRLFADLGADVLKVEPPGGCLGRDALPTLRGASIPFAVHNANKRSTVLDPFDDEDCARF 83 Query 62 LDLAASADIVVDCGLPGQAAAYGASCAELADRYRHLVALSITDFGAAGPRSSWRATDPVL 121 LDLAA ADIVVD G+ + A +G S ELA RY HLV LSITDFGA GPRSSWRATDPVL Sbjct 84 LDLAADADIVVDTGVDERGAMFGTSAEELAARYPHLVVLSITDFGATGPRSSWRATDPVL 143 Query 122 YAMSGALSRSGPTAGTPVLPPDGIASATAAVQAAWAVLVAYFNRLRCGTGDYIDFSRFDA 181 YAM GALSRSGPT GTPVLPPDGIASATAAVQAAWA L AY+NRLRCGTGDYIDFS FDA Sbjct 144 YAMCGALSRSGPTTGTPVLPPDGIASATAAVQAAWAALAAYYNRLRCGTGDYIDFSWFDA 203 Query 182 VVMALDPPFGAHGQVAAGIRSTGRWRGRPKNQDAYPIYPCRDGYVRFCVMAPRQWRGLRR 241 VVMALDP FGAHGQ AAGIR +GRWRGRPKNQDAYPIYPC+DGYVR CVMAPRQW GLRR Sbjct 204 VVMALDPAFGAHGQAAAGIRRSGRWRGRPKNQDAYPIYPCQDGYVRLCVMAPRQWHGLRR 263 Query 242 WLGEPEDFQDPKYDVIGARLAAWPQISVLVAKLCAEKTMKELVAAGQALGVPITAVLTPS 301 WLGEPEDFQDPKYDVIGAR A WPQIS L+ KL A +TMK+LVAAGQA GVPI AVLTPS Sbjct 264 WLGEPEDFQDPKYDVIGARFAVWPQISELLQKLFAGQTMKDLVAAGQAHGVPIAAVLTPS 323 Query 302 RILASEHFQAVGAITDAELVPGVRTGVPTGYFVVDGKRAGFRTPAPAAGQDEPRWLADPA 361 +IL S+HFQAVGAITDAELVPGV T VP+GYFVVDG+RAGFR P PAAGQDEP W P+ Sbjct 324 QILGSDHFQAVGAITDAELVPGVHTAVPSGYFVVDGRRAGFRAPVPAAGQDEPYWRGAPS 383 Query 362 PVPPPSGRVGGYPFEGLRILDLGIIVAGGELSRLFGDLGAEVIKVESADHPDGLRQTRVG 421 VP P+GR+G +PF GLRILDLGIIVAGGELSRLFGDLGA+VIKVESAD+PDGLRQ R G Sbjct 384 VVPSPAGRLGDHPFAGLRILDLGIIVAGGELSRLFGDLGADVIKVESADYPDGLRQARAG 443 Query 422 DAMSESFAWTHRNHLALGLDLRNSEGKAIFGRLVAESDAVFANFKPGTLTSLGFSYDVLH 481 +AMSESFAWTHRN+ ALGLDLR+++GK IF RLVAE+DAVFANFKPGTL +LGFSY+ L Sbjct 444 EAMSESFAWTHRNNRALGLDLRSAQGKTIFARLVAEADAVFANFKPGTLAALGFSYEQLR 503 Query 482 AFNPRIVLAGSSAFGNRGPWSTRMGYGPLVRAATGVTRVWTSDEAQP--DNSRHPFYDAT 539 A NPRIVLA SSAFG+ GPWSTRMGYGPLVRA TGVTR+WTSD+A+ D+ RH FYDAT Sbjct 504 AINPRIVLAESSAFGDIGPWSTRMGYGPLVRATTGVTRLWTSDDAREHDDDGRHAFYDAT 563 Query 540 TIFPDHVVGRVGALLALAALIHRDRTGGGAHVHISQAEVVVNQLDTMFVAEAARATDVAE 599 TIFPDHVVGRV A+ ALAALIHRDR G GAHVHISQAEVVVNQLDT++V +AA A VA+ Sbjct 564 TIFPDHVVGRVTAIAALAALIHRDRAGAGAHVHISQAEVVVNQLDTLYVTQAALAAGVAQ 623 Query 600 IHPDTSVHAVYPCAGDDEWCVISIRSDDEWRRATSVFGQPELANDPRFGASRSRVANRSE 659 I PDT +HAVYPCAGDDEWCVISIRSDDEWRRA SVF E A+DPRFG + +R+A+R E Sbjct 624 IRPDTGLHAVYPCAGDDEWCVISIRSDDEWRRAASVFDHAEWADDPRFGTAEARLAHRRE 683 Query 660 LVAAVSAWTSTRTPVQAAGALQAAGVAAGPMNRPSDILEDPQLIERNLFRDMVHPLIARP 719 LV VSAWT TRTPV+AA LQAA V AGPMNRP DILEDPQLI RNL+R M HPLI P Sbjct 684 LVELVSAWTRTRTPVRAAELLQAAAVPAGPMNRPPDILEDPQLIARNLYRPMRHPLIDNP 743 Query 720 LPAETGPAPFRHIPQAPQRPAPLPGQDSVQICRKLLGMTADETERLINERVMFGPA 775 LPAETGPAPFRHIP A Q PAPLPGQD+V IC LLGM + RLI+ERV+FGPA Sbjct 744 LPAETGPAPFRHIPPARQAPAPLPGQDTVAICCDLLGMNTADIRRLIDERVLFGPA 799 >gi|118467261|ref|YP_882038.1| caib/baif family protein [Mycobacterium avium 104] gi|118168548|gb|ABK69445.1| caib/baif family protein [Mycobacterium avium 104] Length=814 Score = 1165 bits (3014), Expect = 0.0, Method: Compositional matrix adjust. Identities = 604/776 (78%), Positives = 658/776 (85%), Gaps = 2/776 (0%) Query 2 VTRLLADLGADVLKVEPPGGSPGRHVRPTLAGTSIGFAMHNANKRSAVLNPLDESDRRRF 61 VTRL ADLGADVLKVEPPGG GR PTL G SI FA+HNANKRS VL+P D+ D RF Sbjct 24 VTRLFADLGADVLKVEPPGGCLGRDALPTLRGASIPFAVHNANKRSTVLDPFDDEDCARF 83 Query 62 LDLAASADIVVDCGLPGQAAAYGASCAELADRYRHLVALSITDFGAAGPRSSWRATDPVL 121 LDLAA ADIVVD G+ + A +G S ELA RY HLV LSITDFGA GPRSSWRATDPVL Sbjct 84 LDLAADADIVVDTGVDERGAMFGTSAEELAARYPHLVVLSITDFGATGPRSSWRATDPVL 143 Query 122 YAMSGALSRSGPTAGTPVLPPDGIASATAAVQAAWAVLVAYFNRLRCGTGDYIDFSRFDA 181 YAM GALSRSGPT GTPVLPPDGIASATAAVQAAWA L AY+NRLRCGTGDYIDFS FDA Sbjct 144 YAMCGALSRSGPTTGTPVLPPDGIASATAAVQAAWAALAAYYNRLRCGTGDYIDFSWFDA 203 Query 182 VVMALDPPFGAHGQVAAGIRSTGRWRGRPKNQDAYPIYPCRDGYVRFCVMAPRQWRGLRR 241 VVMALDP FGAHGQ AAGIR +GRWRGRPKNQDAYPIYPC+DGYVR CVMAPRQW GLRR Sbjct 204 VVMALDPAFGAHGQAAAGIRRSGRWRGRPKNQDAYPIYPCQDGYVRLCVMAPRQWHGLRR 263 Query 242 WLGEPEDFQDPKYDVIGARLAAWPQISVLVAKLCAEKTMKELVAAGQALGVPITAVLTPS 301 WLGEPEDFQDPKYDVIGAR A WPQIS L+ KL A +TMK+LVAAGQA GVPI AVLTPS Sbjct 264 WLGEPEDFQDPKYDVIGARFAVWPQISELLQKLFAGQTMKDLVAAGQAHGVPIAAVLTPS 323 Query 302 RILASEHFQAVGAITDAELVPGVRTGVPTGYFVVDGKRAGFRTPAPAAGQDEPRWLADPA 361 +IL S+HFQAVGAITDAELVPGV T VP+GYFVVDG+RAGFR P PAAG+DEP W P+ Sbjct 324 QILGSDHFQAVGAITDAELVPGVHTAVPSGYFVVDGRRAGFRAPVPAAGRDEPYWRGAPS 383 Query 362 PVPPPSGRVGGYPFEGLRILDLGIIVAGGELSRLFGDLGAEVIKVESADHPDGLRQTRVG 421 VP P+GR+G +PF GLRILDLGIIVAGGELSRLFGDLGA+VIKVESAD+PDGLRQ R Sbjct 384 VVPSPAGRLGDHPFAGLRILDLGIIVAGGELSRLFGDLGADVIKVESADYPDGLRQARAS 443 Query 422 DAMSESFAWTHRNHLALGLDLRNSEGKAIFGRLVAESDAVFANFKPGTLTSLGFSYDVLH 481 +AM ESFAWTHRN+ ALGLDLR+++GK IF RLVAE+DAVFANFKPGTL +LGFSY+ L Sbjct 444 EAMGESFAWTHRNNRALGLDLRSAQGKTIFARLVAEADAVFANFKPGTLAALGFSYEQLR 503 Query 482 AFNPRIVLAGSSAFGNRGPWSTRMGYGPLVRAATGVTRVWTSDEAQP--DNSRHPFYDAT 539 A NPRIVLA SSAFG+ GPWSTRMGYGPLVRA TGVTR+WTSD+A+ D+ RH FYDAT Sbjct 504 AINPRIVLAESSAFGDTGPWSTRMGYGPLVRATTGVTRLWTSDDAREHDDDGRHAFYDAT 563 Query 540 TIFPDHVVGRVGALLALAALIHRDRTGGGAHVHISQAEVVVNQLDTMFVAEAARATDVAE 599 TIFPDHVVGRV A+ ALAALIHRDR G GAHVHISQAEVVVNQLDT++V +AA A VA+ Sbjct 564 TIFPDHVVGRVTAIAALAALIHRDRAGAGAHVHISQAEVVVNQLDTLYVTQAALAAGVAQ 623 Query 600 IHPDTSVHAVYPCAGDDEWCVISIRSDDEWRRATSVFGQPELANDPRFGASRSRVANRSE 659 I PDT +HAVYPCAGDDEWCVISIRSDDEWRRA +VF E A+DPRFG + +R+A+R E Sbjct 624 IRPDTGLHAVYPCAGDDEWCVISIRSDDEWRRAAAVFDHAEWADDPRFGTAEARLAHRRE 683 Query 660 LVAAVSAWTSTRTPVQAAGALQAAGVAAGPMNRPSDILEDPQLIERNLFRDMVHPLIARP 719 LV VSAWT TRTPV+AA LQAA V AGPMNRP DILEDPQLI RNL+R M HPLI P Sbjct 684 LVELVSAWTRTRTPVRAAELLQAAAVPAGPMNRPPDILEDPQLIARNLYRPMRHPLIDNP 743 Query 720 LPAETGPAPFRHIPQAPQRPAPLPGQDSVQICRKLLGMTADETERLINERVMFGPA 775 LPAETGPAPFRHIP A Q PAPLPGQD+V ICR LLGM + RLI+ERV+FGPA Sbjct 744 LPAETGPAPFRHIPPARQAPAPLPGQDTVAICRDLLGMNTADIRRLIDERVLFGPA 799 >gi|254819326|ref|ZP_05224327.1| caib/baif family protein [Mycobacterium intracellulare ATCC 13950] Length=802 Score = 1164 bits (3012), Expect = 0.0, Method: Compositional matrix adjust. Identities = 599/780 (77%), Positives = 658/780 (85%), Gaps = 2/780 (0%) Query 1 MVTRLLADLGADVLKVEPPGGSPGRHVRPTLAGTSIGFAMHNANKRSAVLNPLDESDRRR 60 +VTRL ADLGADVLKVEPPGG R PTL G SI FA+HNANKRSAVL+P D+ D R Sbjct 23 VVTRLFADLGADVLKVEPPGGCLARDALPTLRGASIPFAVHNANKRSAVLDPFDDEDCAR 82 Query 61 FLDLAASADIVVDCGLPGQAAAYGASCAELADRYRHLVALSITDFGAAGPRSSWRATDPV 120 FLDLAA ADIVVD G + A +G S ELA RY HLV LSITDFGA GPRSSWRATDPV Sbjct 83 FLDLAADADIVVDTGADERGAMFGTSGEELAARYPHLVVLSITDFGATGPRSSWRATDPV 142 Query 121 LYAMSGALSRSGPTAGTPVLPPDGIASATAAVQAAWAVLVAYFNRLRCGTGDYIDFSRFD 180 LYAM GALSRSGPT GTPVLPPDGIASATAAVQAAWA L AY+NRLRCGTGDYIDFS FD Sbjct 143 LYAMCGALSRSGPTIGTPVLPPDGIASATAAVQAAWAALAAYYNRLRCGTGDYIDFSWFD 202 Query 181 AVVMALDPPFGAHGQVAAGIRSTGRWRGRPKNQDAYPIYPCRDGYVRFCVMAPRQWRGLR 240 AVVMALDP FGAHGQ AAG+R TGRWRGRPKNQDAYPIYPCRDGYVR CVMAPRQWRGLR Sbjct 203 AVVMALDPAFGAHGQAAAGVRRTGRWRGRPKNQDAYPIYPCRDGYVRLCVMAPRQWRGLR 262 Query 241 RWLGEPEDFQDPKYDVIGARLAAWPQISVLVAKLCAEKTMKELVAAGQALGVPITAVLTP 300 RWLGEPEDFQDPKYDVIGAR A WPQIS L+ KL A ++MK+LVAAGQA GVPI AVLTP Sbjct 263 RWLGEPEDFQDPKYDVIGARFAVWPQISELLEKLFAGQSMKDLVAAGQAHGVPIAAVLTP 322 Query 301 SRILASEHFQAVGAITDAELVPGVRTGVPTGYFVVDGKRAGFRTPAPAAGQDEPRWLADP 360 +RIL S+HFQAVGAIT+AELVPGVRT VPTGYFVVDG+RAGFRTP PAAG DEP W +P Sbjct 323 ARILGSDHFQAVGAITEAELVPGVRTAVPTGYFVVDGRRAGFRTPVPAAGHDEPYWRGNP 382 Query 361 APVPPPSGRVGGYPFEGLRILDLGIIVAGGELSRLFGDLGAEVIKVESADHPDGLRQTRV 420 + VP SGR+G YPF GLRILDLGIIVAGGELSRLFGDLGA+VIK+ESAD+PDGLRQ RV Sbjct 383 SVVPSASGRLGDYPFAGLRILDLGIIVAGGELSRLFGDLGADVIKIESADYPDGLRQARV 442 Query 421 GDAMSESFAWTHRNHLALGLDLRNSEGKAIFGRLVAESDAVFANFKPGTLTSLGFSYDVL 480 G+AMSESFAWTHRN+ GLDLR++EGK IFGRLVA++DAVFANFKPGTLT+LGFSYD L Sbjct 443 GEAMSESFAWTHRNNRGFGLDLRSAEGKKIFGRLVADADAVFANFKPGTLTALGFSYDEL 502 Query 481 HAFNPRIVLAGSSAFGNRGPWSTRMGYGPLVRAATGVTRVWTSD--EAQPDNSRHPFYDA 538 A NPRIVLA SSAFG+ GPWS R+GYGPLVRA TGVTR+WTSD D +RH FYDA Sbjct 503 RALNPRIVLAESSAFGDTGPWSARLGYGPLVRATTGVTRLWTSDGPGEGADAARHAFYDA 562 Query 539 TTIFPDHVVGRVGALLALAALIHRDRTGGGAHVHISQAEVVVNQLDTMFVAEAARATDVA 598 TT+FPDHVVGRV A+ ALAALIHRDRTG GAHVHISQAEVVVNQLDT++V +AA A + Sbjct 563 TTVFPDHVVGRVTAIAALAALIHRDRTGNGAHVHISQAEVVVNQLDTLYVTQAALAAGID 622 Query 599 EIHPDTSVHAVYPCAGDDEWCVISIRSDDEWRRATSVFGQPELANDPRFGASRSRVANRS 658 I DTS+HAVYPCAGDDEWCVISIR+DDEWRRA SVF PE A+DPRF +R+ NR Sbjct 623 RIRQDTSLHAVYPCAGDDEWCVISIRTDDEWRRAASVFDHPEWADDPRFATGEARLDNRD 682 Query 659 ELVAAVSAWTSTRTPVQAAGALQAAGVAAGPMNRPSDILEDPQLIERNLFRDMVHPLIAR 718 ELV VSAWT TRTP++AA LQ+AGV AGPMNRP DILEDPQLI RN++ M HPLI Sbjct 683 ELVERVSAWTRTRTPLRAAELLQSAGVPAGPMNRPPDILEDPQLIARNVYSAMTHPLIEN 742 Query 719 PLPAETGPAPFRHIPQAPQRPAPLPGQDSVQICRKLLGMTADETERLINERVMFGPAVTA 778 PLPAETGPAP+RHIP A + PAP PGQD+V+ICR +LGM + +RLI++RV+FGPA A Sbjct 743 PLPAETGPAPYRHIPSARRAPAPQPGQDTVEICRNVLGMNTTDIQRLIDDRVLFGPATDA 802 >gi|342861235|ref|ZP_08717883.1| hypothetical protein MCOL_20226 [Mycobacterium colombiense CECT 3035] gi|342131135|gb|EGT84416.1| hypothetical protein MCOL_20226 [Mycobacterium colombiense CECT 3035] Length=802 Score = 1152 bits (2981), Expect = 0.0, Method: Compositional matrix adjust. Identities = 586/779 (76%), Positives = 649/779 (84%), Gaps = 2/779 (0%) Query 2 VTRLLADLGADVLKVEPPGGSPGRHVRPTLAGTSIGFAMHNANKRSAVLNPLDESDRRRF 61 VTRL ADLGADVLKVEPPGG GR PTL G SI FA+HNANKRSAVL+P D+ D RF Sbjct 22 VTRLFADLGADVLKVEPPGGCLGRDALPTLRGASIPFAVHNANKRSAVLDPFDDEDCDRF 81 Query 62 LDLAASADIVVDCGLPGQAAAYGASCAELADRYRHLVALSITDFGAAGPRSSWRATDPVL 121 LDLAA ADIVVD G + A +G S ELA RY HLV LSITDFGA G RSSWRATDPVL Sbjct 82 LDLAAEADIVVDTGADERGAMFGTSGEELAARYPHLVVLSITDFGATGSRSSWRATDPVL 141 Query 122 YAMSGALSRSGPTAGTPVLPPDGIASATAAVQAAWAVLVAYFNRLRCGTGDYIDFSRFDA 181 YAM GALSRSGPTAGTPVLPPDGIAS+TAAVQAAWA L AY+NRLRCGTGDYIDFS FDA Sbjct 142 YAMCGALSRSGPTAGTPVLPPDGIASSTAAVQAAWAALAAYYNRLRCGTGDYIDFSWFDA 201 Query 182 VVMALDPPFGAHGQVAAGIRSTGRWRGRPKNQDAYPIYPCRDGYVRFCVMAPRQWRGLRR 241 VVMALDP FGAHGQ AAG+R +GRWRGRPKNQDAYPIYPC+DGYVR CVMAPRQWRGLRR Sbjct 202 VVMALDPAFGAHGQAAAGVRRSGRWRGRPKNQDAYPIYPCQDGYVRLCVMAPRQWRGLRR 261 Query 242 WLGEPEDFQDPKYDVIGARLAAWPQISVLVAKLCAEKTMKELVAAGQALGVPITAVLTPS 301 WLGEPE FQDPKYD IGAR AAWPQIS L+ +L A +TMK+LVAAGQA GVPI AVLTP+ Sbjct 262 WLGEPEQFQDPKYDAIGARFAAWPQISELIRELFAGQTMKDLVAAGQANGVPIAAVLTPA 321 Query 302 RILASEHFQAVGAITDAELVPGVRTGVPTGYFVVDGKRAGFRTPAPAAGQDEPRWLADPA 361 RIL SEHFQAVGAIT+A+LV GVRT VPTGYFVVDG+R GFRTP PAAG DEP W +P+ Sbjct 322 RILGSEHFQAVGAITEADLVSGVRTSVPTGYFVVDGRRVGFRTPVPAAGHDEPYWRGNPS 381 Query 362 PVPPPSGRVGGYPFEGLRILDLGIIVAGGELSRLFGDLGAEVIKVESADHPDGLRQTRVG 421 VP GR+G YPF GLRILDLGIIVAGGELSRLFGDLGA+VIKVES D+PDGLRQ RVG Sbjct 382 VVPSSPGRLGDYPFAGLRILDLGIIVAGGELSRLFGDLGADVIKVESVDYPDGLRQARVG 441 Query 422 DAMSESFAWTHRNHLALGLDLRNSEGKAIFGRLVAESDAVFANFKPGTLTSLGFSYDVLH 481 DAMSESFAWTHRN+ LGLDLR++EGK IF RLVAE+DAVFANFKPGTLT+LGFSYD L Sbjct 442 DAMSESFAWTHRNNRGLGLDLRSAEGKKIFARLVAEADAVFANFKPGTLTALGFSYDQLA 501 Query 482 AFNPRIVLAGSSAFGNRGPWSTRMGYGPLVRAATGVTRVWTSDEA--QPDNSRHPFYDAT 539 A NPRIVLA SSAFG+ GPWS R+GYGPLVRA TGVTR+WTS +A D RH FYDAT Sbjct 502 AINPRIVLAESSAFGDTGPWSARLGYGPLVRATTGVTRLWTSGDATGDADTGRHGFYDAT 561 Query 540 TIFPDHVVGRVGALLALAALIHRDRTGGGAHVHISQAEVVVNQLDTMFVAEAARATDVAE 599 T+FPDHVVGRV A+ ALAALIHR+R+G GAHVH+SQAEVVVNQLDT++V +AA A VA+ Sbjct 562 TVFPDHVVGRVTAIGALAALIHRNRSGRGAHVHVSQAEVVVNQLDTLYVTQAALAAGVAQ 621 Query 600 IHPDTSVHAVYPCAGDDEWCVISIRSDDEWRRATSVFGQPELANDPRFGASRSRVANRSE 659 I DT++HAVYPCAGDDEWCVISIR+DDEWRRA SVF A DPRF +R+A+R E Sbjct 622 IREDTALHAVYPCAGDDEWCVISIRTDDEWRRAASVFDHTGWAEDPRFATGEARLAHRDE 681 Query 660 LVAAVSAWTSTRTPVQAAGALQAAGVAAGPMNRPSDILEDPQLIERNLFRDMVHPLIARP 719 LV VS WT TRTP++AA LQ+AGV AGPMNRP D+LEDPQLI RN++ M HPLI P Sbjct 682 LVELVSGWTRTRTPLRAAELLQSAGVPAGPMNRPPDVLEDPQLIARNVYSPMTHPLIESP 741 Query 720 LPAETGPAPFRHIPQAPQRPAPLPGQDSVQICRKLLGMTADETERLINERVMFGPAVTA 778 LPAETGPAP+RHIP A Q PAPLPGQ +V+ICR +LGM + +RLI++ V+ P+ A Sbjct 742 LPAETGPAPYRHIPAARQAPAPLPGQHTVEICRSVLGMNPADIQRLIDDGVLSVPSEEA 800 >gi|333990594|ref|YP_004523208.1| acyl-CoA transferase/dehydratase [Mycobacterium sp. JDM601] gi|333486562|gb|AEF35954.1| acyl-CoA transferase/dehydratase [Mycobacterium sp. JDM601] Length=793 Score = 991 bits (2561), Expect = 0.0, Method: Compositional matrix adjust. Identities = 527/778 (68%), Positives = 596/778 (77%), Gaps = 11/778 (1%) Query 2 VTRLLADLGADVLKVEPPGGSPGRHVRPTLAGTSIGFAMHNANKRSAVLNPLDESDRRRF 61 VTRLLADLGADVLKVEPPGGSP R P L G SI FA+HNANKRS +L+P DE DRRRF Sbjct 19 VTRLLADLGADVLKVEPPGGSPARTAAPLLGGVSIPFALHNANKRSVILDPADERDRRRF 78 Query 62 LDLAASADIVVDCGLPGQ-----AAAYGASCAELADRYRHLVALSITDFGAAGPRSSWRA 116 +LA +ADIVVD G G A+ +G SC ELADRY HLV +S+TDFG +GPRS W+A Sbjct 79 QELARTADIVVDGGPRGHTADLGASRFGTSCGELADRYGHLVTMSVTDFGTSGPRSHWQA 138 Query 117 TDPVLYAMSGALSRSGPTAGTPVLPPDGIASATAAVQAAWAVLVAYFNRLRCGTGDYIDF 176 TD VLYA+SGALSRSGPT+GTPVLPPDGIASATAAVQA WAVLVAY+NRLRCG GDYIDF Sbjct 139 TDAVLYALSGALSRSGPTSGTPVLPPDGIASATAAVQAGWAVLVAYYNRLRCGVGDYIDF 198 Query 177 SRFDAVVMALDPPFGAHGQVAAGIRSTGRWRGRPKNQDAYPIYPCRDGYVRFCVMAPRQW 236 +RFDAVV LDP FG+ GQVAA R GRWRGRP+NQDAYPIYPCRDGYVR CVM+PRQW Sbjct 199 ARFDAVVTVLDPIFGSQGQVAAARRGAGRWRGRPRNQDAYPIYPCRDGYVRLCVMSPRQW 258 Query 237 RGLRRWLGEPEDFQDPKYDVIGARLAAWPQISVLVAKLCAEKTMKELVAAGQALGVPITA 296 RGLR WLGEP + DP++DVIG R AAWPQISVLV +L AE+ M +LV AGQA GVPI A Sbjct 259 RGLRAWLGEPAAYADPRFDVIGERFAAWPQISVLVRELFAERDMADLVTAGQARGVPIAA 318 Query 297 VLTPSRILASEHFQAVGAITDAELVPGVRTGVPTGYFVVDGKRAGFRTPAPAAGQDEPRW 356 V P+++LA EHF A A T AEL PG +PTGY+VVD RAGFR+PAPA G W Sbjct 319 VGEPAQVLAGEHFAAARAATHAELAPGRTALIPTGYYVVDDHRAGFRSPAPALGGPNTGW 378 Query 357 LADPAPVPPPSGRV-GGYPFEGLRILDLGIIVAGGELSRLFGDLGAEVIKVESADHPDGL 415 A P PV P SG V G PF+G+RI+DLG+IVAGGE SRLFGDLGAEVIKVESA +PDGL Sbjct 379 RARP-PVGPASGGVSGARPFDGVRIVDLGVIVAGGEASRLFGDLGAEVIKVESAAYPDGL 437 Query 416 RQTRVGDAMSESFAWTHRNHLALGLDLRNSEGKAIFGRLVAESDAVFANFKPGTLTSLGF 475 RQTR G AMSESFAWTHRN+L GLDLRN GK IFGRLV +DAVFANFKPGTL +LGF Sbjct 438 RQTRPGSAMSESFAWTHRNNLGFGLDLRNPAGKEIFGRLVGGADAVFANFKPGTLAALGF 497 Query 476 SYDVLHAFNPRIVLAGSSAFGNRGPWSTRMGYGPLVRAATGVTRVWTSDEAQPDNSRHPF 535 SYD L NPR+VLA SSAFG GPWS RMGYGPLVRA TGVT +W +A D RHPF Sbjct 498 SYDTLRGINPRVVLAESSAFGQTGPWSDRMGYGPLVRATTGVTALWADPDATSDPGRHPF 557 Query 536 YDATTIFPDHVVGRVGALLALAALIHRDRTGGGAHVHISQAEVVVNQLDTMFVAEAARAT 595 YDATT+FPDHVV RV A+ ALAALI ++G G HVH+SQAE VNQLDT +VA A A Sbjct 558 YDATTVFPDHVVARVTAIGALAALIAARQSGAGVHVHVSQAEAAVNQLDTCYVARAGGAA 617 Query 596 DVAEIHPDTSVHAVYPCAGDDEWCVISIRSDDEWRRATSVFGQPELANDPRFGASRSRVA 655 + PDT + V PC+GDDEWCVISIR+D++WR + F LA+DPRF +R+A Sbjct 618 ----VQPDTGLDLVCPCSGDDEWCVISIRTDEDWRCVAAAFEDQRLASDPRFSTGAARIA 673 Query 656 NRSELVAAVSAWTSTRTPVQAAGALQAAGVAAGPMNRPSDILEDPQLIERNLFRDMVHPL 715 +R+ELV +S T R P LQA GVAA PMNRP DI EDPQL R+++ +M HPL Sbjct 674 HRAELVVQLSRHTGRRAPADVGQLLQAVGVAAAPMNRPPDIAEDPQLAHRSVYAEMTHPL 733 Query 716 IARPLPAETGPAPFRHIPQAPQRPAPLPGQDSVQICRKLLGMTADETERLINERVMFG 773 I PLPAETGPAPFR+IP APQRPAPLPGQD+ ICR LLG + TERLI + V+FG Sbjct 734 IEHPLPAETGPAPFRNIPPAPQRPAPLPGQDTRAICRTLLGFDDETTERLIADGVLFG 791 >gi|226361197|ref|YP_002778975.1| hypothetical protein ROP_17830 [Rhodococcus opacus B4] gi|226239682|dbj|BAH50030.1| hypothetical protein [Rhodococcus opacus B4] Length=808 Score = 667 bits (1721), Expect = 0.0, Method: Compositional matrix adjust. Identities = 368/777 (48%), Positives = 479/777 (62%), Gaps = 12/777 (1%) Query 4 RLLADLGADVLKVEPPGGSPGRHVRPTLAGTSIGFAMHNANKRSAVLNPLDESDRRRFLD 63 R LADLGA V KVE PGG+ R P + G SI FA+ NANKR V++ D + R R + Sbjct 23 RYLADLGAQVTKVEGPGGARSRRAEPVVDGVSIPFALRNANKRGIVVDLDDPAGRDRLRE 82 Query 64 LAASADIVVDCGLPGQAAAYGASCAELADRYRHLVALSITDFGAAGPRSSWRATDPVLYA 123 LA +DI+V+ PG + G AEL+ LV +S+T FG GP W AT+ VLYA Sbjct 83 LATESDILVESHAPGWLSERGVGAAELSALAPALVCVSVTPFGQTGPYRDWVATEQVLYA 142 Query 124 MSGALSRSGPTAGTPVLPPDGIASATAAVQAAWAVLVAYFNRLRCGTGDYIDFSRFDAVV 183 +SG LSRSG P+LPP G+ T + AAW+ L+A++ RLR G G +D S F+A+V Sbjct 143 LSGVLSRSGAPGAEPLLPPAGLVEETVGMHAAWSALLAFYGRLRTGQGQVVDLSAFEALV 202 Query 184 MALDPPFGAHGQVAAGIRSTGRWRGRPKNQDAYPIYPCRDGYVRFCVMAPRQWRGLRRWL 243 DP FG G AAG RS RGRP + YP++PC DGYVR C++A RQWRG+ WL Sbjct 203 HGFDPGFGTQGSAAAG-RSDDFPRGRPDASNFYPVFPCADGYVRICLLARRQWRGMFEWL 261 Query 244 GEPEDFQDPKYDVIGARLAAWPQISVLVAKLCAEKTMKELVAAGQALGVPITAVLTPSRI 303 GEP +F DPKYD I AR AA + L+ L A +T +LVA G A GVP+ VL+ + Sbjct 262 GEPAEFADPKYDTIPARFAAAGALHPLIEALFATRTRDQLVAEGAARGVPVGGVLSLGEV 321 Query 304 LASEHFQAVGAITDAELVPGVRTGVPTGYFVVDGKRAGFRTPAPAAGQDEPRWLA---DP 360 L +EHF GA+ D E+ GV VPTGY +DG R G RTPAP G+ + A +P Sbjct 322 LTTEHFDVSGALADVEIATGVHARVPTGYVSIDGARVGMRTPAPEVGEHDAVPAATRENP 381 Query 361 APVPPPSGRVGGYPFEGLRILDLGIIVAGGELSRLFGDLGAEVIKVESADHPDGLRQTRV 420 + + G P +GLR+LDLG+IV G ELSR F D GA+V+KVE+A PDGLRQ++ Sbjct 382 TRAGLGNPQPGTRPLDGLRVLDLGVIVFGAELSRQFADYGADVVKVENAKFPDGLRQSKR 441 Query 421 GDAMSESFAWTHRNHLALGLDLRNSEGKAIFGRLVAESDAVFANFKPGTLTSLGFSYDVL 480 G A++ S AW HRN +LGLDLR+ G+ +F RLV E+D V ANFKPGTL S+G SYD L Sbjct 442 GAALAASVAWGHRNKRSLGLDLRSPGGRDVFRRLVVEADVVLANFKPGTLASMGLSYDEL 501 Query 481 HAFNPRIVLAGSSAFGNRGPWSTRMGYGPLVRAATGVTRVWTSDEAQPDNSRHPFYDATT 540 A NPRI+++ SSAFG+ GPW+ R+GYGPLVRAA GV+ +W P+N D +T Sbjct 502 AALNPRIIVSESSAFGSTGPWNNRLGYGPLVRAACGVSALWR----YPENE-DLLCDGST 556 Query 541 IFPDHVVGRVGALLALAALIHRDRTGGGAHVHISQAEVVVNQLDTMFVAEAARATDVA-- 598 ++PDH+ V A+ LAALI R RTG GA + ++QA+ + QL V E+ R VA Sbjct 557 VYPDHIAAHVTAIAVLAALIQRTRTGRGAALEVAQADTALVQLGAQLVTESLRPGTVAAP 616 Query 599 -EIHPDTSVHAVYPCAGDDEWCVISIRSDDEWRRATSVFGQPELANDPRFGASRSRVANR 657 P + V+ CAGDDEWCV+S+R DD+W + V G+PELA+ P F R+ NR Sbjct 617 GNSDPFAAPAGVFACAGDDEWCVVSVRDDDDWVQLCGVIGRPELADVPAFRTRAERIRNR 676 Query 658 SELVAAVSAWTSTRTPVQAAGALQAAGVAAGPMNRPSDILEDPQLIERNLFRDMVHPLIA 717 +++ + W T+TP QA ALQAAGV AG M R ++L DP L R+ + H L+ Sbjct 677 ADVDDVLDEWLRTQTPAQAVAALQAAGVPAGMMLRLPELLTDPHLAARDAYTLTHHDLLP 736 Query 718 RPLPAETGPAPFRHIPQAPQRPAPLPGQDSVQICRKLLGMTADETERLINERVMFGP 774 + LP A F I P R AP+ GQ S +IC +L MT DE +RL+ E V+ P Sbjct 737 KALPTAARVARFSAISDPPLRQAPVAGQHSREICEDVLRMTTDEVDRLVAEAVLQPP 793 Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 100/337 (30%), Positives = 143/337 (43%), Gaps = 31/337 (9%) Query 374 PFEGLRILDLGIIVAGGELSRLFGDLGAEVIKVESADHPDGLRQTR---VGDAMSESFAW 430 P G+R+LDL + G R DLGA+V KVE P G R R V D +S FA Sbjct 4 PLTGIRVLDLTDGL-GESCGRYLADLGAQVTKVEG---PGGARSRRAEPVVDGVSIPFAL 59 Query 431 THRNHLALGLDLRNSEGKAIFGRLVAESDAVFANFKPGTLTSLGFSYDVLHAFNPRIVLA 490 + N + +DL + G+ L ESD + + PG L+ G L A P +V Sbjct 60 RNANKRGIVVDLDDPAGRDRLRELATESDILVESHAPGWLSERGVGAAELSALAPALVCV 119 Query 491 GSSAFGNRGPWSTRMGYGPLVRAATGVTRVWTSDEAQPDNSRHPFYDATTIFP-----DH 545 + FG GP+ + ++ A +GV + A+P + P + Sbjct 120 SVTPFGQTGPYRDWVATEQVLYALSGVLSRSGAPGAEP------------LLPPAGLVEE 167 Query 546 VVGRVGALLALAALIHRDRTGGGAHVHISQAEVVVNQLDTMF----VAEAARATDVAEIH 601 VG A AL A R RTG G V +S E +V+ D F A A R+ D Sbjct 168 TVGMHAAWSALLAFYGRLRTGQGQVVDLSAFEALVHGFDPGFGTQGSAAAGRSDDFPRGR 227 Query 602 PDTS-VHAVYPCAGDDEWCVISIRSDDEWRRATSVFGQPELANDPRFGASRSRVANRSEL 660 PD S + V+PCA D + I + + +WR G+P DP++ +R A L Sbjct 228 PDASNFYPVFPCA--DGYVRICLLARRQWRGMFEWLGEPAEFADPKYDTIPARFAAAGAL 285 Query 661 VAAVSAWTSTRTPVQAAGALQAAGVAAGPMNRPSDIL 697 + A +TRT Q A GV G + ++L Sbjct 286 HPLIEALFATRTRDQLVAEGAARGVPVGGVLSLGEVL 322 Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 95/341 (28%), Positives = 141/341 (42%), Gaps = 37/341 (10%) Query 2 VTRLLADLGADVLKVEPPGGSPGRHVRPTLAGTSIGFAMHNANKRSAVLNPLDESDRRRF 61 ++R AD GADV+KVE G A + A + NKRS L+ R F Sbjct 413 LSRQFADYGADVVKVENAKFPDGLRQSKRGAALAASVAWGHRNKRSLGLDLRSPGGRDVF 472 Query 62 LDLAASADIVVDCGLPGQAAAYGASCAELADRYRHLVALSITDFGAAGPRSSWRATDPVL 121 L AD+V+ PG A+ G S ELA ++ + FG+ GP ++ P++ Sbjct 473 RRLVVEADVVLANFKPGTLASMGLSYDELAALNPRIIVSESSAFGSTGPWNNRLGYGPLV 532 Query 122 YAMSG--ALSRSGPTA-----GTPVLPPDGIASATAAVQAAWAVLVAYFNRLRCGTGDYI 174 A G AL R G+ V PD IA+ A+ AVL A R R G G + Sbjct 533 RAACGVSALWRYPENEDLLCDGSTVY-PDHIAAHVTAI----AVLAALIQRTRTGRGAAL 587 Query 175 DFSRFDAVVMALDPPFGAH----GQVAAGIRSTGRWRGRPKNQDAYP----IYPCRDGYV 226 + ++ D ++ L G VAA P N D + ++ C G Sbjct 588 EVAQADTALVQLGAQLVTESLRPGTVAA-----------PGNSDPFAAPAGVFACA-GDD 635 Query 227 RFCVMAPR---QWRGLRRWLGEPEDFQDPKYDVIGARLAAWPQISVLVAKLCAEKTMKEL 283 +CV++ R W L +G PE P + R+ + ++ + +T + Sbjct 636 EWCVVSVRDDDDWVQLCGVIGRPELADVPAFRTRAERIRNRADVDDVLDEWLRTQTPAQA 695 Query 284 VAAGQALGVPITAVLTPSRILASEHFQAVGA--ITDAELVP 322 VAA QA GVP +L +L H A A +T +L+P Sbjct 696 VAALQAAGVPAGMMLRLPELLTDPHLAARDAYTLTHHDLLP 736 >gi|111017416|ref|YP_700388.1| formyl-coenzyme A transferase [Rhodococcus jostii RHA1] gi|110816946|gb|ABG92230.1| probable formyl-coenzyme A transferase [Rhodococcus jostii RHA1] Length=808 Score = 651 bits (1679), Expect = 0.0, Method: Compositional matrix adjust. Identities = 349/780 (45%), Positives = 479/780 (62%), Gaps = 14/780 (1%) Query 4 RLLADLGADVLKVEPPGGSPGRHVRPTLAGTSIGFAMHNANKRSAVLNPLDESDRRRFLD 63 R LADLGA+V++VE PGGS R +P L G S+ FA+ NANKR VL+ + DR R Sbjct 23 RFLADLGAEVVRVELPGGSASRTAQPILDGVSVPFALRNANKRGIVLDLDADDDRDRLRL 82 Query 64 LAASADIVVDCGLPGQAAAYGASCAELADRYRHLVALSITDFGAAGPRSSWRATDPVLYA 123 LA +DI+++ PG A G A+L LVA+SIT FG GP W AT+ +LYA Sbjct 83 LAQRSDILLESFPPGFLATRGVGAADLCRVNPALVAVSITGFGQNGPYRDWAATEQILYA 142 Query 124 MSGALSRSGPTAGTPVLPPDGIASATAAVQAAWAVLVAYFNRLRCGTGDYIDFSRFDAVV 183 +SG LSRSG P+LPP+G+ + V +AW+ L+AY++RL G G +D S F+ +V Sbjct 143 LSGVLSRSGEPGEAPLLPPNGLIDESVGVHSAWSALLAYYDRLHTGHGQLVDISAFEVIV 202 Query 184 MALDPPFGAHGQVAAGIRSTGRWRGRPKNQDAYPIYPCRDGYVRFCVMAPRQWRGLRRWL 243 DP FG G AAG RS RGRP + YP+Y C DG VR C++A RQW+ + WL Sbjct 203 HGFDPGFGVQGSAAAG-RSEDFPRGRPDAANFYPVYRCGDGQVRICLLAKRQWQAMYEWL 261 Query 244 GEPEDFQDPKYDVIGARLAAWPQISVLVAKLCAEKTMKELVAAGQALGVPITAVLTPSRI 303 G PE+F DPKYD I AR AA +++ L+ +L + T +LVA G A G+PI + T + + Sbjct 262 GRPEEFADPKYDTIPARFAASERLNPLIEQLFSTYTRDDLVAEGAARGIPIGGLNTVTEV 321 Query 304 LASEHFQAVGAITDAELVPGVRTGVPTGYFVVDGKRAGFRTPAPAAGQDEPRWLADPA-- 361 L +EHF A G DAE+ PGV VP+GY ++G+RAGFR+ AP G+ L + Sbjct 322 LTTEHFAASGTFVDAEIAPGVNARVPSGYAKINGERAGFRSRAPELGEHNDLVLRSASAD 381 Query 362 ---PVPPPSGRVGGYPFEGLRILDLGIIVAGGELSRLFGDLGAEVIKVESADHPDGLRQT 418 P+P P G PFEGLR+LD+G++V G EL R F D GA+VIK+E++ PDGLRQ+ Sbjct 382 TRVPIPAPQREPGTRPFEGLRVLDMGVVVFGAELGRQFADNGADVIKIENSQFPDGLRQS 441 Query 419 RVGDAMSESFAWTHRNHLALGLDLRNSEGKAIFGRLVAESDAVFANFKPGTLTSLGFSYD 478 + G A++ S AW HRN +LGL+LR+ EG IF RL E+D V ANFKPGTL S+G SYD Sbjct 442 KRGAALAASVAWGHRNRRSLGLNLRSPEGIRIFKRLAEEADIVLANFKPGTLASMGLSYD 501 Query 479 VLHAFNPRIVLAGSSAFGNRGPWSTRMGYGPLVRAATGVTRVWTSDEAQPDNSRHPFYDA 538 L A NPRI+++ SSAFG+ GPW+ R+GYGPLVRAA GV+ +W +A D Sbjct 502 ELAAINPRIIVSESSAFGSVGPWNKRLGYGPLVRAACGVSALWRYSDASDG-----LCDG 556 Query 539 TTIFPDHVVGRVGALLALAALIHRDRTGGGAHVHISQAEVVVNQLDTMFVAEAARATDVA 598 +T++PDH+ G+V A LA LIHR +TG GA + ++QA+ + QL VAE ++ Sbjct 557 STVYPDHIAGQVTATTILATLIHRLQTGRGAAIEVAQADTAIVQLRNQLVAEHLAPGSIS 616 Query 599 ---EIHPDTSVHAVYPCAGDDEWCVISIRSDDEWRRATSVFGQPELANDPRFGASRSRVA 655 P ++ VYPCAGDDEWCV+++R D +W V +P+L +DPRF R+A Sbjct 617 APGNSDPYSAPSGVYPCAGDDEWCVVTVRDDADWVALCGVLRRPDLVDDPRFATDELRIA 676 Query 656 NRSELVAAVSAWTSTRTPVQAAGALQAAGVAAGPMNRPSDILEDPQLIERNLFRDMVHPL 715 +R+E ++ W TP +A LQAAG+ G M R D+L + L R + ++ H L Sbjct 677 HRAEADEVLAQWLLLHTPTEAMDTLQAAGIPTGAMIRLPDLLTNSHLTARGAYTELEHEL 736 Query 716 IARPLPAETGPAPFRHIPQAPQRPAPLPGQDSVQICRKLLGMTADETERLINERVMFGPA 775 + PLP A F +P P + APL G + +IC +LG++ E + L+++ V+ PA Sbjct 737 LPAPLPTAKQVAHFAALPDWPLQQAPLAGAQTREICEVVLGLSTVEIDTLVHDGVLQPPA 796 Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 95/343 (28%), Positives = 139/343 (41%), Gaps = 17/343 (4%) Query 374 PFEGLRILDLGIIVAGGELSRLFGDLGAEVIKVESADHPDGLRQTRVGDAMSESFAWTHR 433 P +G+R+L+L G R DLGAEV++VE + D +S FA + Sbjct 4 PLQGVRVLELTDGF-GDTAGRFLADLGAEVVRVELPGGSASRTAQPILDGVSVPFALRNA 62 Query 434 NHLALGLDLRNSEGKAIFGRLVAESDAVFANFKPGTLTSLGFSYDVLHAFNPRIVLAGSS 493 N + LDL + + L SD + +F PG L + G L NP +V + Sbjct 63 NKRGIVLDLDADDDRDRLRLLAQRSDILLESFPPGFLATRGVGAADLCRVNPALVAVSIT 122 Query 494 AFGNRGPWSTRMGYGPLVRAATGVTRVWTSDEAQPDNSRHPFYDATTIFPDHVVGRVGAL 553 FG GP+ ++ A +GV S +P + P + D VG A Sbjct 123 GFGQNGPYRDWAATEQILYALSGV----LSRSGEPGEA--PLLPPNGLI-DESVGVHSAW 175 Query 554 LALAALIHRDRTGGGAHVHISQAEVVVNQLDTMF----VAEAARATDVAEIHPD-TSVHA 608 AL A R TG G V IS EV+V+ D F A A R+ D PD + + Sbjct 176 SALLAYYDRLHTGHGQLVDISAFEVIVHGFDPGFGVQGSAAAGRSEDFPRGRPDAANFYP 235 Query 609 VYPCA-GDDEWCVISIRSDDEWRRATSVFGQPELANDPRFGASRSRVANRSELVAAVSAW 667 VY C G C+++ R +W+ G+PE DP++ +R A L + Sbjct 236 VYRCGDGQVRICLLAKR---QWQAMYEWLGRPEEFADPKYDTIPARFAASERLNPLIEQL 292 Query 668 TSTRTPVQAAGALQAAGVAAGPMNRPSDILEDPQLIERNLFRD 710 ST T A G+ G +N +++L F D Sbjct 293 FSTYTRDDLVAEGAARGIPIGGLNTVTEVLTTEHFAASGTFVD 335 >gi|288923821|ref|ZP_06417908.1| L-carnitine dehydratase/bile acid-inducible protein F [Frankia sp. EUN1f] gi|288344829|gb|EFC79271.1| L-carnitine dehydratase/bile acid-inducible protein F [Frankia sp. EUN1f] Length=854 Score = 645 bits (1663), Expect = 0.0, Method: Compositional matrix adjust. Identities = 375/798 (47%), Positives = 475/798 (60%), Gaps = 38/798 (4%) Query 4 RLLADLGADVLKVEPPGGSPGRHVRPTLAGTSIGFAMHNANKRSAVLNPLDESDRRRFLD 63 R LADLGA+VL++EPPGGSPGR + FA+ NA K VL+ DE+ R R + Sbjct 64 RYLADLGAEVLRIEPPGGSPGR-------AEPVAFALRNAGKLGLVLDLDDETGRERLHE 116 Query 64 LAASADIVVDCGLPGQAAAYGASCAELADRYRHLVALSITDFGAAGPRSSWRATDPVLYA 123 LA +ADI++D G A A G + L+ R+ LV +SIT FG +GP + AT+PVL A Sbjct 117 LAGTADILLDSSGEGIARARGLTPEALSARHPRLVIVSITAFGRSGPYRDFTATEPVLAA 176 Query 124 MSGALSRSGPTAGTPVLPPDGIASATAAVQAAWAVLVAYFNRLRCGTGDYIDFSRFDAVV 183 + G LSRSG PVLPP G+ T V AAWA LVAY RLR G G+ +D +AVV Sbjct 177 LGGVLSRSGLPGSRPVLPPAGLVDQTVGVHAAWAALVAYVRRLRTGAGELVDVCAHEAVV 236 Query 184 MALDPPFGAHGQVAAGIRSTGRWRGRPKNQDAYPIYPCRDGYVRFCVMAPRQWRGLRRWL 243 DP FG G AAG R G R RP YP++PC DG+VR C+++ RQWR + WL Sbjct 237 HGFDPGFGTQGSAAAG-RPEGFPRDRPDASAFYPVFPCADGHVRICLLSRRQWRAMFAWL 295 Query 244 GEPEDFQDPKYDVIGARLAAWPQISVLVAKLCAEKTMKELVAAGQALGVPITAVLTPSRI 303 GEP +F DP YD I AR AA ++ L+ L A ELVA G GVPI AVLTP + Sbjct 296 GEPAEFADPSYDTIPARFAAADRLHPLIGALFAGVRRDELVAEGTRRGVPIAAVLTPGEV 355 Query 304 LASEHFQAVGAITDAELVPGVRTGVPTGYFVVDGKRAGFRTPAPAAGQDEPRWLADPAPV 363 LA++HF G + DAE+ G+R VP+GY +DG RAG R AP G+ L + P Sbjct 356 LAADHFAETGTLIDAEIAEGLRARVPSGYVSIDGVRAGLRHRAPNLGEHTELLLDEAVPG 415 Query 364 --------PPPSGRVG------------GYPFEGLRILDLGIIVAGGELSRLFGDLGAEV 403 P +G G P GLR+LDLG+IV G EL RLF D GA+V Sbjct 416 GGALGGGAPDRTGERGPELDLGIPGDPADGPLAGLRVLDLGVIVFGAELGRLFADQGADV 475 Query 404 IKVESADHPDGLRQTRVGDAMSESFAWTHRNHLALGLDLRNSEGKAIFGRLVAESDAVFA 463 IK+E+ PDGLRQTR G M+ SFAW RN LGLDLR+ +G A+F LV +D V A Sbjct 476 IKIENEAFPDGLRQTRRGGGMNASFAWGQRNKRGLGLDLRSEQGAALFRELVRHADIVAA 535 Query 464 NFKPGTLTSLGFSYDVLHAFNPRIVLAGSSAFGNRGPWSTRMGYGPLVRAATGVTRVWTS 523 NFKPGTL SLG S+ L NPRI+++ SSAFG+RGPWS RMGYGPLVR++ GV+ +W Sbjct 536 NFKPGTLESLGLSHARLAEINPRIIVSDSSAFGSRGPWSGRMGYGPLVRSSCGVSALW-R 594 Query 524 DEAQPDNSRHPFYDATTIFPDHVVGRVGALLALAALIHRDRTGGGAHVHISQAEVVVNQL 583 D + + + D +T++PDH+ G V A+ ALAA+I R R+G GA + +QA+V V L Sbjct 595 DPTRAETDSQAYCDGSTVYPDHIAGHVTAVAALAAVIRRARSGRGAALETAQADVAVMPL 654 Query 584 DTMFVAEAARATDVAEIHPD----TSVHAVYPCAGDDEWCVISIRSDDEWRRATSVFGQP 639 AE+ VA D AV PCAGDDEWCV+ +R D+ W R T+V G+P Sbjct 655 GPALAAESLAPGTVAPGTVDGGAGNMFAAVLPCAGDDEWCVVDVRGDEHWARLTTVLGRP 714 Query 640 ELA--NDPRFGASRSRVANRSELVAAVSAWTSTRTPVQAAGALQAAGVAAGPMNRPSDIL 697 ELA G R+R A EL+A WT+ TP Q LQ AGV AG M R + L Sbjct 715 ELAVGELASAGGRRARWAEVEELIA---RWTAQCTPAQVTAILQEAGVPAGAMVRLPEEL 771 Query 698 EDPQLIERNLFRDMVHPLIARPLPAETGPAPFRHIPQAPQRPAPLPGQDSVQICRKLLGM 757 DPQL+ R FR + HPL++RP+PA A F I P RPAP+PG+ + +ICR LLG+ Sbjct 772 TDPQLVARQSFRTLEHPLLSRPVPANARIARFSTIADPPLRPAPVPGEHTREICRTLLGL 831 Query 758 TADETERLINERVMFGPA 775 T DE +RL V+ P+ Sbjct 832 TEDEIDRLAAAGVLQPPS 849 Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 88/299 (30%), Positives = 124/299 (42%), Gaps = 34/299 (11%) Query 373 YPFEGLRILDLGIIVAGGELSRLFGDLGAEVIKVESADHPDGLRQTRVGDAMSESFAWTH 432 P +R+LDL A R DLGAEV+++E P G G A +FA + Sbjct 44 LPLRRVRVLDL-TEGAAQSCGRYLADLGAEVLRIEP---PGG----SPGRAEPVAFALRN 95 Query 433 RNHLALGLDLRNSEGKAIFGRLVAESDAVFANFKPGTLTSLGFSYDVLHAFNPRIVLAGS 492 L L LDL + G+ L +D + + G + G + + L A +PR+V+ Sbjct 96 AGKLGLVLDLDDETGRERLHELAGTADILLDSSGEGIARARGLTPEALSARHPRLVIVSI 155 Query 493 SAFGNRGPWSTRMGYGPLVRAATGVTRVWTSDEAQPDNSRHPFYDATTIFP-----DHVV 547 +AFG GP+ P++ A GV SR + + P D V Sbjct 156 TAFGRSGPYRDFTATEPVLAALGGVL------------SRSGLPGSRPVLPPAGLVDQTV 203 Query 548 GRVGALLALAALIHRDRTGGGAHVHISQAEVVVNQLDTMF----VAEAARATDVAEIHPD 603 G A AL A + R RTG G V + E VV+ D F A A R PD Sbjct 204 GVHAAWAALVAYVRRLRTGAGELVDVCAHEAVVHGFDPGFGTQGSAAAGRPEGFPRDRPD 263 Query 604 TSV-HAVYPCA-GDDEWCVISIRSDDEWRRATSVFGQPELANDPRFGASRSRVANRSEL 660 S + V+PCA G C++S R +WR + G+P DP + +R A L Sbjct 264 ASAFYPVFPCADGHVRICLLSRR---QWRAMFAWLGEPAEFADPSYDTIPARFAAADRL 319 >gi|298525358|ref|ZP_07012767.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] gi|298495152|gb|EFI30446.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] Length=405 Score = 606 bits (1563), Expect = 4e-171, Method: Compositional matrix adjust. Identities = 316/316 (100%), Positives = 316/316 (100%), Gaps = 0/316 (0%) Query 1 MVTRLLADLGADVLKVEPPGGSPGRHVRPTLAGTSIGFAMHNANKRSAVLNPLDESDRRR 60 MVTRLLADLGADVLKVEPPGGSPGRHVRPTLAGTSIGFAMHNANKRSAVLNPLDESDRRR Sbjct 25 MVTRLLADLGADVLKVEPPGGSPGRHVRPTLAGTSIGFAMHNANKRSAVLNPLDESDRRR 84 Query 61 FLDLAASADIVVDCGLPGQAAAYGASCAELADRYRHLVALSITDFGAAGPRSSWRATDPV 120 FLDLAASADIVVDCGLPGQAAAYGASCAELADRYRHLVALSITDFGAAGPRSSWRATDPV Sbjct 85 FLDLAASADIVVDCGLPGQAAAYGASCAELADRYRHLVALSITDFGAAGPRSSWRATDPV 144 Query 121 LYAMSGALSRSGPTAGTPVLPPDGIASATAAVQAAWAVLVAYFNRLRCGTGDYIDFSRFD 180 LYAMSGALSRSGPTAGTPVLPPDGIASATAAVQAAWAVLVAYFNRLRCGTGDYIDFSRFD Sbjct 145 LYAMSGALSRSGPTAGTPVLPPDGIASATAAVQAAWAVLVAYFNRLRCGTGDYIDFSRFD 204 Query 181 AVVMALDPPFGAHGQVAAGIRSTGRWRGRPKNQDAYPIYPCRDGYVRFCVMAPRQWRGLR 240 AVVMALDPPFGAHGQVAAGIRSTGRWRGRPKNQDAYPIYPCRDGYVRFCVMAPRQWRGLR Sbjct 205 AVVMALDPPFGAHGQVAAGIRSTGRWRGRPKNQDAYPIYPCRDGYVRFCVMAPRQWRGLR 264 Query 241 RWLGEPEDFQDPKYDVIGARLAAWPQISVLVAKLCAEKTMKELVAAGQALGVPITAVLTP 300 RWLGEPEDFQDPKYDVIGARLAAWPQISVLVAKLCAEKTMKELVAAGQALGVPITAVLTP Sbjct 265 RWLGEPEDFQDPKYDVIGARLAAWPQISVLVAKLCAEKTMKELVAAGQALGVPITAVLTP 324 Query 301 SRILASEHFQAVGAIT 316 SRILASEHFQAVGAIT Sbjct 325 SRILASEHFQAVGAIT 340 Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 91/339 (27%), Positives = 143/339 (43%), Gaps = 32/339 (9%) Query 375 FEGLRILDL--GIIVAGGEL-SRLFGDLGAEVIKVESADHPDG--LRQTRVGDAMSESFA 429 + +R+LDL G G ++ +RL DLGA+V+KVE G +R T G ++ FA Sbjct 6 LDAVRVLDLSDGCSAGGTDMVTRLLADLGADVLKVEPPGGSPGRHVRPTLAGTSI--GFA 63 Query 430 WTHRNHLALGLDLRNSEGKAIFGRLVAESDAVFANFKPGTLTSLGFSYDVLHAFNPRIVL 489 + N + L+ + + F L A +D V PG + G S L +V Sbjct 64 MHNANKRSAVLNPLDESDRRRFLDLAASADIVVDCGLPGQAAAYGASCAELADRYRHLVA 123 Query 490 AGSSAFGNRGPWSTRMGYGPLVRAATGVTRVWTSDEAQPDNSRHPFYDATTIFPDHV--- 546 + FG GP S+ P++ A +G + P + PD + Sbjct 124 LSITDFGAAGPRSSWRATDPVLYAMSGAL-----------SRSGPTAGTPVLPPDGIASA 172 Query 547 -VGRVGALLALAALIHRDRTGGGAHVHISQAEVVVNQLDTMF-----VAEAARATDVAEI 600 A L A +R R G G ++ S+ + VV LD F VA R+T Sbjct 173 TAAVQAAWAVLVAYFNRLRCGTGDYIDFSRFDAVVMALDPPFGAHGQVAAGIRSTGRWRG 232 Query 601 HP-DTSVHAVYPCA-GDDEWCVISIRSDDEWRRATSVFGQPELANDPRFGASRSRVANRS 658 P + + +YPC G +CV++ R +WR G+PE DP++ +R+A Sbjct 233 RPKNQDAYPIYPCRDGYVRFCVMAPR---QWRGLRRWLGEPEDFQDPKYDVIGARLAAWP 289 Query 659 ELVAAVSAWTSTRTPVQAAGALQAAGVAAGPMNRPSDIL 697 ++ V+ + +T + A QA GV + PS IL Sbjct 290 QISVLVAKLCAEKTMKELVAAGQALGVPITAVLTPSRIL 328 >gi|312197205|ref|YP_004017266.1| L-carnitine dehydratase/bile acid-inducible protein F [Frankia sp. EuI1c] gi|311228541|gb|ADP81396.1| L-carnitine dehydratase/bile acid-inducible protein F [Frankia sp. EuI1c] Length=836 Score = 602 bits (1553), Expect = 7e-170, Method: Compositional matrix adjust. Identities = 366/799 (46%), Positives = 471/799 (59%), Gaps = 43/799 (5%) Query 4 RLLADLGADVLKVEPPGGSPGRHVRPTLAGTSIGFAMHNANKRSAVLNPLDESDRRRFLD 63 R LADLGA+V+KVEPPGG+ R P G S+ F + NANK VL+ + R R + Sbjct 23 RYLADLGAEVVKVEPPGGAASRRAGPR-PGDSLPFLLRNANKLGVVLDLETPAGRDRLRE 81 Query 64 LAASADIVVDCGLPGQAAAYGASCAELADRYRHLVALSITDFGAAGPRSSWRATDPVLYA 123 L + ADIVV+ PG A G +L LV +S+T FG GP SW AT+ VL Sbjct 82 LVSRADIVVESAPPGHLDALGVGPRDLLAGNPGLVVVSVTGFGRTGPYRSWSATEAVLAG 141 Query 124 MSGALSRSGPTAGTPVLPPDGIASATAAVQAAWAVLVAYFNRLRCGTGDYIDFSRFDAVV 183 + G LSRSG P+LPPDG+ +T AV AAW+ LVAY RLR G G+ +D + F+AVV Sbjct 142 LGGVLSRSGRPGEAPLLPPDGLVESTVAVLAAWSALVAYAKRLRTGVGELVDLAAFEAVV 201 Query 184 MALDPPFGAHGQVAAGIRSTGRWRGRPKNQDAYPIYPCRDGYVRFCVMAPRQWRGLRRWL 243 DP FG G AAG R+ RGRP D YP++ RDG+VR C++A RQWR + WL Sbjct 202 HGFDPAFGTQGTAAAG-RTEDFPRGRPDAADFYPVFAARDGHVRLCLLAKRQWRAMFGWL 260 Query 244 GEPEDFQDPKYDVIGARLAAWPQISVLVAKLCAEKTMKELVAAGQALGVPITAVLTPSRI 303 GEP +F DP++D I AR A ++ +A L ++ ELVA G GVP+ AVLTP+++ Sbjct 261 GEPPEFADPRFDTIPARFRAADRLHPRIAALFRDRPCAELVAEGARRGVPVAAVLTPAQV 320 Query 304 LASEHFQAVGAITDAELVPGVRTGVPTGYFVVDGKRAGFRTPAP---------------A 348 LA+E F GA+ D E+ PG+R +P+GY VDG+RAGFR AP A Sbjct 321 LATEQFAVTGALVDVEIAPGIRARIPSGYVRVDGERAGFRRRAPLPGEHDDLVFGSAAGA 380 Query 349 AGQDEPRWLADPAPVPPPSGRVGGYPFEGLRILDLGIIVAGGELSRLFGDLGAEVIKVES 408 +G D P A A P+G VG P EG+R+LDLG+IV G EL RLF D GA+VIK+E+ Sbjct 381 SGADGPAACARGAARGGPAG-VGARPLEGVRVLDLGVIVFGAELGRLFADQGADVIKIEN 439 Query 409 ADHPDGLRQTRVGDAMSESFAWTHRNHLALGLDLRNSEGKAIFGRLVAESDAVFANFKPG 468 PDGLRQ+R G AMS SFAW HRN LGLDLR+ G IF LVA SD V ANFKPG Sbjct 440 VAFPDGLRQSRGGAAMSASFAWGHRNRRGLGLDLRDPRGSEIFRALVARSDLVLANFKPG 499 Query 469 TLTSLGFSYDVLHAFNPRIVLAGSSAFGNRGPWSTRMGYGPLVRAATGVTRVWT---SDE 525 TL +LG S + L A NP ++++ SSAFG +GPWS RMGYGPLVRA GV+ +W +D+ Sbjct 500 TLEALGASPNALAAINPGVIVSDSSAFGGQGPWSARMGYGPLVRACAGVSALWRVPGTDD 559 Query 526 AQPDNSRHPFYDATTIFPDHVVGRVGALLALAALIHRDRTGGGAHVHISQAEVVVNQLDT 585 A + D +T++PDHV A+ LAALI R R+ A A V Q+D Sbjct 560 A--------YCDGSTVYPDHVAAYASAVALLAALIGRLRS-AAAGGVALGATVTGAQVDA 610 Query 586 MFVAEAAR--ATDVA-----------EIHPDTSVHAVYPCAGDDEWCVISIRSDDEWRRA 632 VA AR A +A + D ++H VYPCAGDDEWCV+S+R DD+W R Sbjct 611 ALVALGARLAAQSLAGDGGPEPDAGDHLAADDAIHGVYPCAGDDEWCVVSLRGDDDWLRL 670 Query 633 TSVFGQPELANDPRFGASRSRVANRSELVAAVSAWTSTRTPVQAAGALQAAGVAAGPMNR 692 V G+P+LA+ P F + +R R E+ A V+AWT P LQ AGV AG M R Sbjct 671 CQVAGRPDLADAPAFRTAAARARRRPEVDAVVAAWTRRHPPRDVMTRLQDAGVPAGVMLR 730 Query 693 PSDILEDPQLIERNLFRDMVHPLIARPLPAETGPAPFRHIPQAPQRPAPLPGQDSVQICR 752 + L DPQL+ R F + H + P+ A A F IP RPAP G+ + +IC Sbjct 731 LPEELTDPQLLARESFATLRHDALPGPMAANARVARFSGIPDPELRPAPFQGEHTREICA 790 Query 753 KLLGMTADETERLINERVM 771 LLG+ D+ + L+ + V+ Sbjct 791 SLLGLADDQIDELVRDAVL 809 >gi|111223283|ref|YP_714077.1| acyl-CoA transferases/carnitine dehydratase [Frankia alni ACN14a] gi|111150815|emb|CAJ62519.1| Predicted acyl-CoA transferases/carnitine dehydratase [Frankia alni ACN14a] Length=827 Score = 568 bits (1465), Expect = 1e-159, Method: Compositional matrix adjust. Identities = 334/786 (43%), Positives = 440/786 (56%), Gaps = 27/786 (3%) Query 2 VTRLLADLGADVLKVEPPGGSPGRHVRPTLAGTSIGFAMHNANKRSAVLNPLDESDRRRF 61 + R LA+ GADVL+VEPPGG+ R + G S+ FA N KR+ L+ +DR RF Sbjct 39 IGRHLAEWGADVLRVEPPGGAADRRTGRRVGGVSLAFAAANLGKRAVSLDLAQPADRERF 98 Query 62 LDLAASADIVVDCGLPGQAAAYGASCAELADRYRHLVALSITDFGAAGPRSSWRATDPVL 121 L A ADI+++ P A + + LV LS T FG GP++ W+AT PV Sbjct 99 TALLADADILLESTPPSGPEATTLDVEGIRREHPSLVVLSATPFGRTGPQAGWQATGPVF 158 Query 122 YAMSGALSRSGPTAGTPVLPPDGIASATAAVQAAWAVLVAYFNRLRCGTGDYIDFSRFDA 181 +A+SG LSRSG P+LPP + AA QA + VL+AY RLR G GD++DF+ D Sbjct 159 HALSGELSRSGIPGRAPLLPPGDLPYDCAAAQAVFVVLLAYLERLRTGLGDHLDFAVLDG 218 Query 182 VVMALDPPFGAHGQVAAGIRSTGRWRGRPKNQDAYPIYPCRDGYVRFCVMAPRQWRGLRR 241 V ALDP +G G AG+ ++ RGRP+ + YPI PC DG+VR C++APRQWR + Sbjct 219 AVAALDPGYGIAGSATAGVPASKLPRGRPEARHQYPIIPCADGFVRLCILAPRQWRAMFA 278 Query 242 WLGEPEDFQDPKYDVIGARLAAWPQISVLVAKLCAEKTMKELVAAGQALGVPITAVLTPS 301 W+G P +F DP YD + R A+ + +A+ A+KT EL AGQ GVP AVL Sbjct 279 WMGRPAEFADPSYDKLSTRFASTTLLPA-IARFFADKTRAELEQAGQHHGVPTAAVLDLD 337 Query 302 RILASEHFQAVGAITDAELVPGVRTGVPTGYFVVDGKRAGFRTPAPAAGQDEP----RW- 356 L SE +A GA + EL PG+ P G +DG RAG R PAP D W Sbjct 338 EALESEQVRARGAFSPVELAPGMAAPFPNGVLELDGHRAGVRGPAPTLPPDSSPAAQGWG 397 Query 357 ----------LADPAPVPPPSGRV--GGYPFEGLRILDLGIIVAGGELSRLFGDLGAEVI 404 P G V G P GLR+LDLG+IV G E RL D GA+VI Sbjct 398 DRPIPGPGPGPDPAPGPDPQDGSVDPGRRPLAGLRVLDLGVIVVGAEQGRLLADQGADVI 457 Query 405 KVESADHPDGLRQTRVGDAMSESFAWTHRNHLALGLDLRNSEGKAIFGRLVAESDAVFAN 464 KVE+ PDG RQ R G M+ +FA HRN +LGLDLR+ GK +F RLVA++D V N Sbjct 458 KVENDAFPDGSRQARDGSVMTVTFAAGHRNKRSLGLDLRSPRGKDLFRRLVADTDVVLTN 517 Query 465 FKPGTLTSLGFSYDVLHAFNPRIVLAGSSAFGNRGPWSTRMGYGPLVRAATGVTRVWTSD 524 ++PGTL SLG YDVL + NP +++ SSAFG+ GPWS R+GYGPLVRA G+T W Sbjct 518 YRPGTLESLGLGYDVLRSTNPAVIVVDSSAFGSTGPWSRRLGYGPLVRACAGLTAQWRY- 576 Query 525 EAQPDNSRHPFYDATTIFPDHVVGRVGALLALAALIHRDRTGGGAHVHISQAEVVVNQLD 584 +PD F DA T++PDHV R+G LA LI R RTG G V +SQ EV++ Sbjct 577 PGEPDG----FSDALTVYPDHVAARIGIAGVLALLIRRRRTGIGGTVSVSQTEVMLGHA- 631 Query 585 TMFVAEAARATDVAEIHPDTSVHA---VYPCAGDDEWCVISIRSDDEWRRATSVFGQPEL 641 VA+ A E+ T A V+P AGDD+WCV+++R D +W+ V +P+L Sbjct 632 AATVADKALLRAGVEVEGPTEPDAPWGVFPTAGDDDWCVVTVRGDGDWQALCRVLDRPDL 691 Query 642 ANDPRFGASRSRVANRSELVAAVSAWTSTRTPVQAAGALQAAGVAAGPMNRPSDILEDPQ 701 A +P ++ R R + AA++ W + V+A LQAAG+ AG M R S++ P Sbjct 692 ATEPALTSAYGRAGARDRIDAALTDWLAQHGAVEAMTRLQAAGIPAGAMLRVSELPSFPY 751 Query 702 LIERNLFRDMVHPLIARPLPAETGPAPFRHIPQAPQRPAPLPGQDSVQICRKLLGMTADE 761 +R +FR HP I + E P +P P PAPL G+ + QI R+ LG T E Sbjct 752 YAQRGVFRLSGHPRIRQTFYLENAPVVSDRLPDPPDIPAPLLGEHTEQILRETLGRTDAE 811 Query 762 TERLIN 767 T L++ Sbjct 812 TAELLS 817 >gi|254284362|ref|ZP_04959330.1| caib/baif family protein [gamma proteobacterium NOR51-B] gi|219680565|gb|EED36914.1| caib/baif family protein [gamma proteobacterium NOR51-B] Length=808 Score = 556 bits (1434), Expect = 4e-156, Method: Compositional matrix adjust. Identities = 318/783 (41%), Positives = 433/783 (56%), Gaps = 14/783 (1%) Query 1 MVTRLLADLGADVLKVEPPGGSPGRHVRPTLAGTSIGFAMHNANKRSAVLNPLDESDRRR 60 M R LADLGA V+ EP GGSP R V P + G S+ F H ANK S V++P + R + Sbjct 32 MCGRFLADLGATVIMAEPDGGSPSRRVGPMVCGESLYFLTHGANKESRVIDPATDHGRTQ 91 Query 61 FLDLAASADIVVDCGLPGQAAAYGASCAELADRYRHLVALSITDFGAAGPRSSWRATDPV 120 LDL + D++++ PG A+ + L R+ LV LSI+DFG GP W + V Sbjct 92 LLDLLSGFDLLINATNPGFLASCDLDISLLRQRFPALVILSISDFGHTGPYRDWVGDNAV 151 Query 121 LYAMSGALSRSGPTAGTPVLPPDGIASATAAVQAAWAVLVAYFNRLRCGTGDYIDFSRFD 180 A++G L+RSG P+LPP +A TAA+QAAW L+A R G G ++DFS + Sbjct 152 HLALAGVLARSGIGDKPPLLPPGKLAYETAAIQAAWVALLALRQRAATGRGQHLDFSILE 211 Query 181 AVVMALDPPFGAHGQVAAGIRSTGRW--RGRPKNQDAYPIYPCRDGYVRFCVMAPRQWRG 238 A LDP G G A+G RS R RP+ YP +PCRDG VR CV+ PRQW+ Sbjct 212 ATAQILDPALGVTGS-ASGGRSAAEMAPRARPEKFPLYPTFPCRDGIVRVCVLNPRQWQA 270 Query 239 LRRWLGEPEDFQDPKYDVIGARLAAWPQISVLVAKLCAEKTMKELVAAGQALGVPITAVL 298 + WLG+ F D KY + AR +++ L+A+L KT +++ G G+PI V Sbjct 271 MSHWLGDDHPFTDEKYGGLKARYGVIHEVNALIAELLKPKTKADIIREGLERGIPIAVVA 330 Query 299 TPSRILASEHFQAVGAITDAELVPGVRTGV-PTGYFVVDGKRAGFRTPAPAAGQDEPRWL 357 +PS +L+ EHF A G G V PTG+ ++G+R G R AP G++ Sbjct 331 SPSDVLSDEHFIARGVFAPVCNTEGEAFAVGPTGFLELNGRRMGIRRKAPELGEEFQSQN 390 Query 358 ADPAPVPPPSGRVGGY-PFEGLRILDLGIIVAGGELSRLFGDLGAEVIKVESADHPDGLR 416 P PSG P G+R+LDLG+IVAG EL RLF D GA+V+KVE++ +PDGLR Sbjct 391 HSAQHKPAPSGTEEAIRPLAGIRVLDLGVIVAGAELGRLFADQGADVVKVENSQYPDGLR 450 Query 417 QTRVGDAMSESFAWTHRNHLALGLDLRNSEGKAIFGRLVAESDAVFANFKPGTLTSLGFS 476 Q+ G+ MS SFA RN +LGL+LR +G+ +F LV +SD V +NFKPGT+ SLG Sbjct 451 QSLTGEVMSVSFAQGSRNKRSLGLNLRCEKGRELFLALVEQSDVVLSNFKPGTMESLGLG 510 Query 477 YDVLHAFNPRIVLAGSSAFGNRGPWSTRMGYGPLVRAATGVTRVWTSDEAQPDNSRHPFY 536 YDVL A NP +V+ SSA GN GP + MGYGPLVR+ATG+T +W PD + F Sbjct 511 YDVLKAANPGVVVFDSSALGNTGPQAKAMGYGPLVRSATGLTGLWR----YPDEEQS-FS 565 Query 537 DATTIFPDHVVGRVGALLALAALIHRDRTGGGAHVHISQAEVVVNQLDTMFVAEAARATD 596 D TIFPDH R+ A LA L+ R TG G V SQAE ++ + F+ E+ Sbjct 566 DGVTIFPDHFSARISATAILALLLRRQDTGLGGVVSQSQAEAILTGMSEYFLHESLVPGS 625 Query 597 VAEIHPDTSVHA---VYPCAGDDEWCVISIRSDDEWRRATSVFGQPE-LANDPRFGASRS 652 V + A V+ CAGDDEWC + + SD++W++ + L+ + Sbjct 626 VIAGNTVCEYAAPAGVFQCAGDDEWCALGVHSDEQWQQFCGLLEHNHSLSQRTDLEGIEA 685 Query 653 RVANRSELVAAVSAWTSTRTPVQAAGALQAAGVAAGPMNRPSDILEDPQLIERNLFRDMV 712 R R EL +AWT ++P LQA GV A M R ++ DP L R+ FR++ Sbjct 686 RWRCRDELHQLTAAWTRNQSPEAVMQRLQAIGVPAAKMLRVDELPADPHLQARSFFRELH 745 Query 713 HPLIARPLPAETGPAPFRHIPQAPQRPAPLPGQDSVQICRKLLGMTADETERLINERVMF 772 P I PL E GP +P+ RPAP P Q + +I R+LL ++ + +RL+ + Sbjct 746 QPQIPEPLLTENGPVGNSDLPEPDIRPAPEPFQHTREIARELLALSDSDIDRLVESGTLE 805 Query 773 GPA 775 PA Sbjct 806 VPA 808 >gi|333992483|ref|YP_004525097.1| acyl-CoA transferase/dehydratase [Mycobacterium sp. JDM601] gi|333488451|gb|AEF37843.1| acyl-CoA transferase/dehydratase [Mycobacterium sp. JDM601] Length=788 Score = 551 bits (1421), Expect = 1e-154, Method: Compositional matrix adjust. Identities = 317/782 (41%), Positives = 439/782 (57%), Gaps = 20/782 (2%) Query 4 RLLADLGADVLKVEPPGGSPGRHVRPTLAGTSIGFAMHNANKRSAVLNPLDESDRRRFLD 63 R LADLGADV+ VEPP G+ R +P G +GFA +ANKR V++ ++ R + L Sbjct 14 RFLADLGADVVLVEPPEGADSRWAQPQHNGHGLGFATAHANKRGVVIDVDTDAGRSQLLT 73 Query 64 LAASADIVVDCGLPGQAAAYGASCAELADRYRHLVALSITDFGAAGPRSSWRATDPVLYA 123 L SADI ++ G+ G + R +L +S++DFG GP +++++ V A Sbjct 74 LTNSADIFLESQRVGRLTELGVGQQVMRQRNPNLTVVSVSDFGQTGPYRDYKSSEAVFVA 133 Query 124 MSGALSRSGPTAGTPVLPPDGIASATAAVQAAWAVLVAYFNRLRCGTGDYIDFSRFDAVV 183 MS L+RSG P+LPP +A+ TAAV A+A L+AYF R GDY+D S FD VV Sbjct 134 MSSLLTRSGAPGREPLLPPGRLATQTAAVDVAYAALLAYFRVQRGADGDYLDVSLFDLVV 193 Query 184 MALDPPFGAHGQVAAGIRSTGRWRGRPKNQDAYPIYPCRDGYVRFCVMAPRQWRGLRRWL 243 LDP FG G G GRP + YPI PC DG+VR V + +QWR L W+ Sbjct 194 QDLDPGFGMAGTATMGQPMINMPPGRPDVRMMYPILPCADGHVRMFVASAKQWRALFTWM 253 Query 244 GEPEDFQDPKYDVIGARLAAWP-QISVLVAKLCAEKTMKELVAAGQALGVPITAVLTPSR 302 GEPE+ DP + + R W +I + + A+KT E+V+ G LG+ + + T Sbjct 254 GEPEELSDPALENLLGRFMNWANKIQPALVEFFADKTRAEIVSRGSELGIAVGPLNTAEE 313 Query 303 ILASEHFQAVGAITDAELVPGVRTGVPTGYFVVDGKRAGFRTPAPAAGQDEPRWLADPAP 362 IL S+H + + AE+ PGV+ +P GY DG RAGFR AP G+ +A+ + Sbjct 314 ILTSDHVRERNSFVGAEIAPGVQATIPNGYLEFDGVRAGFRHRAPELGEHTAEVMAEVSE 373 Query 363 VPPP-SGRVGGYPFEGLRILDLGIIVAGGELSRLFGDLGAEVIKVESADHPDGLRQTRVG 421 P +V P G+R+LDLG+IV G E R D GAEVIKVE+ DG RQ Sbjct 374 REPAVHQQVPARPLTGVRVLDLGVIVVGAETGRALADQGAEVIKVENRAFIDGARQADAP 433 Query 422 DAMSESFAWTHRNHLALGLDLRNSEGKAIFGRLVAESDAVFANFKPGTLTSLGFSYDVLH 481 D +S SF+ +R + GL+LR+ GK +FG+LVA+SD V NFKPGTL SLG YD L Sbjct 434 DKVSYSFSLGNRGKRSFGLNLRSDAGKELFGKLVADSDVVLTNFKPGTLESLGLGYDKLK 493 Query 482 AFNPRIVLAGSSAFGNRGPWSTRMGYGPLVRAATGVTRVWTSDEAQPDNSRHP-----FY 536 A NPRI++ SSA G+ G WS RMGYGPLVRA G+T +W RHP F Sbjct 494 AINPRIIVVESSALGHTGSWSKRMGYGPLVRATVGLTALW----------RHPDAVDGFG 543 Query 537 DATTIFPDHVVGRVGALLALAALIHRDRTGGGAHVHISQAEVVVNQLDTMFVAEAARATD 596 D T++PDH GRVG +AALI R+RTG G ++++Q E V +QL T +V E+ + Sbjct 544 DDQTVYPDHAAGRVGTAAVIAALIERERTGVGRRINLAQMETVFSQLATEYVRESLQPGT 603 Query 597 VAEIHPDTSVHA---VYPCAGDDEWCVISIRSDDEWRRATSVFGQPELANDPRFGASRSR 653 + A VY C G+D +C +++ D++W + G+ +LA++P + + R Sbjct 604 LVAKGNACEFDAPSGVYSCVGEDSYCAVTVDGDEDWANLANAIGRSDLADNPAYATATGR 663 Query 654 VANRSELVAAVSAWTSTRTPVQAAGALQAAGVAAGPMNRPSDILEDPQLIERNLFRDMVH 713 VA+R+ L A V W + TP +A LQAAGVAAG D+L +PQ++ R ++ Sbjct 664 VAHRTILDAGVQEWIAALTPREAQERLQAAGVAAGAAAHVKDLLTNPQVVARGRLGELAQ 723 Query 714 PLIARPLPAETGPAPFRHIPQAPQRPAPLPGQDSVQICRKLLGMTADETERLINERVMFG 773 P PL A GPA F +IP+ PAP D+ ++ KLLG++ E + LI V+ Sbjct 724 PGYDGPLEAFLGPALFANIPEPELCPAPAMAADTRELAGKLLGLSDTEIDELIGAGVLEA 783 Query 774 PA 775 PA Sbjct 784 PA 785 >gi|111224154|ref|YP_714948.1| putative Formyl-CoA transferase [Frankia alni ACN14a] gi|111151686|emb|CAJ63405.1| conserved hypothetical protein; putative Formyl-CoA transferase [Frankia alni ACN14a] Length=813 Score = 536 bits (1382), Expect = 4e-150, Method: Compositional matrix adjust. Identities = 358/790 (46%), Positives = 457/790 (58%), Gaps = 23/790 (2%) Query 4 RLLADLGADVLKVEPPGGSPGRHVRP-TLAGTSIGFAMHNANKRSAVLNPLDESDRRRFL 62 R LADLGA+VL++EPPGG+ R V P T GTS+ FA+H NKR+AV++ + R Sbjct 23 RYLADLGAEVLRIEPPGGAASRRVGPFTEDGTSLSFAVHAINKRAAVVDLTTAAGRELLG 82 Query 63 DLAASADIVVDCGLPGQAAAYGASCAELADRYRHLVALSITDFGAAGPRSSWRATDPVLY 122 LAA+ADI++ P Q AA G L + LV +SITDFG GP W + V Sbjct 83 ALAATADILLHTARPDQQAALGLDPEGLLAAHPGLVVVSITDFGLTGPYRDWTGSSDVHV 142 Query 123 AMSGALSRSGPTAGTPVLPPDGIASATAAVQAAWAVLVAYFNRLRCGTGDYIDFSRFDAV 182 A+ G LSRSG P+LPP +A AA QAAWA LVAY NRL G GD +DFS +AV Sbjct 143 AIGGLLSRSGLPGLPPLLPPAFLADECAAAQAAWATLVAYANRLDTGRGDAVDFSLLEAV 202 Query 183 VMALDPPFGAHGQVAAGIRSTGRWRGRPKNQDAYPIYPCRDGYVRFCVMAPRQWRGLRRW 242 LDP +G G AG RGRP + YPI+P DG+VR C++A RQWRG+ RW Sbjct 203 AQVLDPGYGISGSARAGATVRDLPRGRPDARHLYPIFPAADGWVRICLLAARQWRGMFRW 262 Query 243 LGEPEDFQDPKYDVIGARLAAWPQISVLVAKLCAEKTMKELVAAGQALGVPITAVLTPSR 302 LGEP F +PKYD IG R AA ++ L+ KL AE+TM+ +VA GVP A+L + Sbjct 263 LGEPAQFAEPKYDNIGVRFAAAGELYPLIGKLFAERTMETIVAESIGFGVPAAALLDAAA 322 Query 303 ILASEHFQAVGAITDAELVPGVRTGVPTGYFVVDGKRAGFRTPAPAAGQDEPRWLADPA- 361 +A EH +A G E+ PGV V G +DG RAG R P G+ +P L A Sbjct 323 TVAGEHVRARGTFVPVEVAPGVTVPVADGLVEIDGVRAGRRFGPPPLGECDPAVLVTTAA 382 Query 362 ---PVPPPSGRVGG------YPFEGLRILDLGIIVAGGELSRLFGDLGAEVIKVESADHP 412 P P +G + G +PF GLR+LDLG+IV G EL RLF D GAEVIKVE+ P Sbjct 383 ASRPGPERAGDLIGAAGAPRHPFAGLRVLDLGVIVVGAELGRLFADHGAEVIKVENRAFP 442 Query 413 DGLRQTRVGDAMSESFAWTHRNHLALGLDLRNSEGKAIFGRLVAESDAVFANFKPGTLTS 472 DG RQ R G MSESFAW HRN +LGL+LR+ G+AIF RL A +D V +NFKPG + S Sbjct 443 DGSRQNRSGGQMSESFAWGHRNKSSLGLNLRDPRGQAIFLRLAASADVVLSNFKPGAMES 502 Query 473 LGFSYDVLHAFNPRIVLAGSSAFGNRGPWSTRMGYGPLVRAATGVTRVWTSDEAQPDNSR 532 LG YD L NP I++A SSAFG+ GPWS R+GYGPLVRA G++ +W + PD Sbjct 503 LGLGYDELARVNPGIIVADSSAFGSTGPWSRRLGYGPLVRATAGLSELWRYPD-LPDG-- 559 Query 533 HPFYDATTIFPDHVVGRVGALLALAALIHRDRTGGGAHVHISQAEVVVNQLDTMFVAEAA 592 F DA TI+PDHV RV A+ LA L+ R RTG G V +Q E + Q+ E Sbjct 560 --FCDAITIYPDHVAARVSAVAVLALLLRRRRTGRGGTVSAAQIETIFYQMGAGLAEEYL 617 Query 593 RATDVAEIHPDTSVHA---VYPCAGDDEWCVISIRS----DDEWRRATSVFGQPELANDP 645 R V D A ++ CAGDDEWCV+ + + D + R V G+P +DP Sbjct 618 RPGSVRAEGNDRRGDAPRGLFACAGDDEWCVVDVNAGGDGDTTFGRLADVVGEPRWRDDP 677 Query 646 RFGASRSRVANRSELVAAVSAWTSTRTPVQAAGALQAAGVAAGPMNRPSDILEDPQLIER 705 RF + R A+R+E+ AAV WT+T TP QAA LQ GV AG M R ++ DPQL R Sbjct 678 RFATAAGRDAHRAEINAAVGRWTATHTPAQAARHLQEHGVPAGQMLRVHELPADPQLAAR 737 Query 706 NLFRDMVHPLIARPLPAETGPAPFRHIPQAPQRPAPLPGQDSVQICRKLLGMTADETERL 765 L + P + PL G A +R + PAPL + + ++ +LLG+T E + L Sbjct 738 RLLVEQDQPQLPPPLLTLGGEAHYRGVADPLTGPAPLVAEHTRELAERLLGLTPAEVDAL 797 Query 766 INERVMFGPA 775 + V+ P+ Sbjct 798 VAAGVLEAPS 807 >gi|254480250|ref|ZP_05093498.1| CAIB/BAIF family protein [marine gamma proteobacterium HTCC2148] gi|214039812|gb|EEB80471.1| CAIB/BAIF family protein [marine gamma proteobacterium HTCC2148] Length=850 Score = 534 bits (1375), Expect = 3e-149, Method: Compositional matrix adjust. Identities = 294/745 (40%), Positives = 412/745 (56%), Gaps = 28/745 (3%) Query 4 RLLADLGADVLKVEPPGGSPGRHVRPTLAGTSIGFAMHNANKRSAVLNPLDESDRRRFLD 63 R+LADLGA+V+ VEPP G R P + S+ FA HNANK S L+ + ++ FL Sbjct 34 RILADLGAEVILVEPPEGMLSRLRAPVVDSQSLYFATHNANKFSVQLDLESQEGKKDFLK 93 Query 64 LAASADIVVDCGLPGQAAAYGASCAELADRYRHLVALSITDFGAAGPRSSWRATDPVLYA 123 L ++D+++D G S +EL Y L+ LSITDFG GP + AT+ V A Sbjct 94 LVRNSDMLIDGGDKSIWEMLSTSHSELRSIYPDLILLSITDFGLKGPYKDFTATESVHMA 153 Query 124 MSGALSRSGPTAGTPVLPPDGIASATAAVQAAWAVLVAYFNRLRCGTGDYIDFSRFDAVV 183 MS LSRSG P+LPP +A TAA+QAAW L+AY+ R G GD +DFS DA+ Sbjct 154 MSTVLSRSGTNGSPPLLPPGELALETAAIQAAWVALLAYWQRSHNGKGDLLDFSINDAIA 213 Query 184 MALDPPFGAHGQVAAGIRSTGRW-RGRPKNQDA----------YPIYPCRDGYVRFCVMA 232 DP GA G V+AG + GRP+ YPI+ C DG++R CV+ Sbjct 214 QTFDPGVGATGNVSAGRTAIEVAPHGRPEVNFIPGKLPSAALLYPIFKCTDGHIRTCVLN 273 Query 233 PRQWRGLRRWLGEPEDFQDPKYDVIGARLAAWPQISVLVAKLCAEKTMKELVAAGQALGV 292 PRQWR + WLG F PK+ V R+ ++ L+A L +T + LVA GQ G+ Sbjct 274 PRQWRSMSEWLGPDHPFTHPKFGVAANRVLNIGAVNKLMASLFENQTREHLVAEGQKRGI 333 Query 293 PITAVLTPSRILASEHFQAVGAITDAELVPGVRTGVPTGYFVVDGKRAGFRTPAPAAGQD 352 PI ++ PS + ++HF T + + G + P+GYF +DG+R G T AP G + Sbjct 334 PIASIKLPSEVFDNDHFDQRNLFTKID-IGGKKAKAPSGYFCIDGRRIGINTLAPKLGAN 392 Query 353 EPRWLA-----DPAPVPPPSGRVGGYPFEGLRILDLGIIVAGGELSRLFGDLGAEVIKVE 407 L+ DP V R P G+ +LD+G+I+AGG+L RLF D GA VIKVE Sbjct 393 TQDLLSSAKMKDPLRVTEGESR---RPLGGILVLDIGVIIAGGDLGRLFADQGATVIKVE 449 Query 408 SADHPDGLRQTRVGDAMSESFAWTHRNHLALGLDLRNSEGKAIFGRLVAESDAVFANFKP 467 + +PDGLRQ+ + + SFA +RN +LGL+LR+ +GK IF RL ++D V +NFKP Sbjct 450 NKAYPDGLRQSLDNNPVPISFAQANRNKKSLGLNLRSDKGKEIFLRLAKDADVVISNFKP 509 Query 468 GTLTSLGFSYDVLHAFNPRIVLAGSSAFGNRGPWSTRMGYGPLVRAATGVTRVWTSDEAQ 527 GT+ SLG Y+ L NP I+ A SSA G+ GP + MGYGPLVRA+T ++ +W E + Sbjct 510 GTMESLGLGYEALREINPGIICAESSAMGSTGPQARTMGYGPLVRASTALSGLWRYPEKE 569 Query 528 PDNSRHPFYDATTIFPDHVVGRVGALLALAALIHRDRTGGGAHVHISQAEVVVNQLDTMF 587 F D TIFPDH RV A LA LI R T G + SQAE ++N L + F Sbjct 570 -----MGFGDCVTIFPDHFAARVSATAILAKLIQRKTTAVGGFIDTSQAECIINALASEF 624 Query 588 VAEAARATDVAEIHPDTSVHA---VYPCAGDDEWCVISIRSDDEWRRATSVFGQPELAND 644 + E+ + ++ A +YPCAG+DEWCVIS+ +DD+W+ + +LA++ Sbjct 625 LGESIAPGSLKSTGNQSAFDAPNSLYPCAGNDEWCVISVTNDDQWQGLCRAMNRADLADN 684 Query 645 PRFGASRSRVANRSELVAAVSAWTSTRTPVQAAGALQAAGVAAGPMNRPSDILEDPQLIE 704 + + R+ +R ++ V+ W R+P + Q V AG M R S+ +E+P Sbjct 685 TNYQTTEGRLEHRIDIEDIVTRWCKPRSPYEVMNLCQNQEVPAGNMLRLSEFIENPHYNA 744 Query 705 RNLFRDMVHPLIARPLPAETGPAPF 729 RN F+ + P + R + E GP F Sbjct 745 RNFFQKLHQPTVGRTIETENGPVAF 769 Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 89/360 (25%), Positives = 148/360 (42%), Gaps = 43/360 (11%) Query 374 PFEGLRILDLGIIVAGGELSRLFGDLGAEVIKVESADHPDG-LRQTR--VGDAMSESFAW 430 P G+R+LDL + G R+ DLGAEVI VE P+G L + R V D+ S FA Sbjct 15 PLTGIRVLDL-CDLRGQSCGRILADLGAEVILVEP---PEGMLSRLRAPVVDSQSLYFAT 70 Query 431 THRNHLALGLDLRNSEGKAIFGRLVAESDAVFANFKPGTLTSLGFSYDVLHAFNPRIVLA 490 + N ++ LDL + EGK F +LV SD + L S+ L + P ++L Sbjct 71 HNANKFSVQLDLESQEGKKDFLKLVRNSDMLIDGGDKSIWEMLSTSHSELRSIYPDLILL 130 Query 491 GSSAFGNRGPWSTRMGYGPLVRAATGVTRVWTSDEAQPDNSRHPFYDATTIFPDHVVGRV 550 + FG +GP+ + A + V ++ + P + P + Sbjct 131 SITDFGLKGPYKDFTATESVHMAMSTVLSRSGTNGSPP-----------LLPPGELALET 179 Query 551 GAL----LALAALIHRDRTGGGAHVHISQAEVVVNQLD-----TMFVAEAARATDVA-EI 600 A+ +AL A R G G + S + + D T V+ A +VA Sbjct 180 AAIQAAWVALLAYWQRSHNGKGDLLDFSINDAIAQTFDPGVGATGNVSAGRTAIEVAPHG 239 Query 601 HPDTS-----------VHAVYPCA-GDDEWCVISIRSDDEWRRATSVFGQPELANDPRFG 648 P+ + ++ ++ C G CV++ R +WR + G P+FG Sbjct 240 RPEVNFIPGKLPSAALLYPIFKCTDGHIRTCVLNPR---QWRSMSEWLGPDHPFTHPKFG 296 Query 649 ASRSRVANRSELVAAVSAWTSTRTPVQAAGALQAAGVAAGPMNRPSDILEDPQLIERNLF 708 + +RV N + +++ +T Q G+ + PS++ ++ +RNLF Sbjct 297 VAANRVLNIGAVNKLMASLFENQTREHLVAEGQKRGIPIASIKLPSEVFDNDHFDQRNLF 356 >gi|118472187|ref|YP_886269.1| caib/baif family protein [Mycobacterium smegmatis str. MC2 155] gi|118173474|gb|ABK74370.1| caib/baif family protein [Mycobacterium smegmatis str. MC2 155] Length=799 Score = 482 bits (1241), Expect = 8e-134, Method: Compositional matrix adjust. Identities = 307/783 (40%), Positives = 424/783 (55%), Gaps = 28/783 (3%) Query 2 VTRLLADLGADVLKVEPPGGSP-GRHVRPTLAGTSIGFAMHNANKRSAVLNPLDESDRRR 60 V RLLADLGA V V G + G V P + +G A++ + L+ RR Sbjct 27 VGRLLADLGAQVTPVNLAGVTEAGATVGPRIGAVPVGTAINRFGLSTVDLDTSTADGARR 86 Query 61 FLDLAASADIVVDCGLPGQAAAYGASCAELADRYRHLVALSITDFGAAGPRSSWRATDPV 120 + +L A ADI+++ PG A S E+ + LV LS++DFG +W+AT PV Sbjct 87 WRELLADADILIENTRPGSDAEKALSAREIHADHPSLVILSVSDFGRDTAYRTWQATTPV 146 Query 121 LYAMSGALSRSGPTAGTPVLPPD-GIASATAAVQAAWAVLVAYFNRLRCGTGDYIDFSRF 179 L+A++ LSRSG P++PP + AA QAA + Y +RLR GTGD IDFS Sbjct 147 LHALTSELSRSGIPGREPLVPPAPQLPYQVAAAQAAVMTVSVYLDRLRTGTGDLIDFSVL 206 Query 180 DAVVMALDPPFGAHGQVAAGIRSTGRWRGRPKNQDAYPIYPCRDGYVRFCVMAPRQWRGL 239 D + LDPPFG G +AG+ + R + YPI C+DGYVR CV+A RQW+G+ Sbjct 207 DGAMQTLDPPFGTPGTASAGVPLAEQRRNWLAERQRYPIVRCKDGYVRICVLAKRQWQGM 266 Query 240 RRWLGEPEDFQDPKYDVIGARLAAWPQISVLVAKLCAEKTMKELVAAGQALGVPITAVLT 299 W+GEPE+F DPK++ + R + P + + + CA+KT EL A GQ GVP AVLT Sbjct 267 FTWMGEPEEFADPKFNSLMERFMS-PTLLPAIERFCADKTRAELEAEGQRHGVPTAAVLT 325 Query 300 PSRILASEHFQAVGAITDAELVPGVRTGVPTGYFVVDGKRAGFRTPAPAAGQDEPRWLAD 359 + L +E + G + EL G VP G VDG RA T PR + Sbjct 326 LTEALDTEQVKERGFFREVELANGFTAPVPVGVSEVDGHRASALT--------APRGTSA 377 Query 360 PAPVPPPSG----RVGGYPFEGLRILDLGIIVAGGELSRLFGDLGAEVIKVESADHPDGL 415 P P G R G P EGLR+LDLG+IV G + RLF DLGA+VIK+E++ PDGL Sbjct 378 PPEGAPVLGGRARRDVGLPLEGLRVLDLGVIVVGADTGRLFADLGADVIKIENSAFPDGL 437 Query 416 RQTRVGDAMSESFAWTHRNHLALGLDLRNSEGKAIFGRLVAESDAVFANFKPGTLTSLGF 475 R + MS+++A HRN ++G+DLR+ EG+A+ RL ++D V NFKPG +LG Sbjct 438 RGRL--NMMSQTYASGHRNKRSIGIDLRSDEGRALAHRLAEDADVVLTNFKPGVAQALGM 495 Query 476 SYDVLHAFNPRIVLAGSSAFGNRGPWSTRMGYGPLVRAATGVTRVWTSDEAQPDNSRHPF 535 + L NP IV+ SSAFG GPW+ R+GYGPLVRAA G T +W +A + F Sbjct 496 DFGSLKKVNPGIVVVDSSAFGPTGPWARRLGYGPLVRAAAGFTDLWVYPDAPGE-----F 550 Query 536 YDATTIFPDHVVGRVGALLALAALIHRDRTGGGAHVHISQAEVVVNQLDTMFVAEAARAT 595 D T++PDHV R+GAL AL L+ R+RTG G V ++Q+EV+++ L AE + Sbjct 551 CDTVTVYPDHVAARIGALTALTLLLRRERTGTGGAVSVAQSEVMLSHLAGEIAAEVLQRQ 610 Query 596 DVAEIHPDTSVH----AVYPCAGDDEWCVISIRSDDEWRRATSVFGQPELANDPRFGASR 651 A D VH ++P G+D+W +++R +W+ V G+ +LA D Sbjct 611 GHA--RSDEPVHDAPWGLFPAEGEDKWVAVTVRDTTDWQALCGVIGRADLAADDALNTPA 668 Query 652 SRVANRSELVAAVSAWTSTRTPVQAAGALQAAGVAAGPMNRPSDILEDPQLIERNLFRDM 711 R A+R+ + AV AWTS RT A LQ AGV AG + ++ ER FR+ Sbjct 669 GRDADRARIDEAVRAWTSARTATAAMELLQKAGVPAGAVLHAGEVPNFGYYAERRAFREE 728 Query 712 VHPLIARPLPAETGPAPFRHIPQAPQRPAPLPGQDSVQICRKLLGMTADETERLINERVM 771 +HP A P E + P APL G+ + +I +LLG++ E + LI V+ Sbjct 729 LHPHAAEPFMMENVQIHSDRVADPPLGQAPLLGEQTREIAAELLGLSDAEIDELIERGVL 788 Query 772 FGP 774 P Sbjct 789 EMP 791 >gi|145222921|ref|YP_001133599.1| L-carnitine dehydratase/bile acid-inducible protein F [Mycobacterium gilvum PYR-GCK] gi|145215407|gb|ABP44811.1| L-carnitine dehydratase/bile acid-inducible protein F [Mycobacterium gilvum PYR-GCK] Length=779 Score = 478 bits (1229), Expect = 3e-132, Method: Compositional matrix adjust. Identities = 309/785 (40%), Positives = 422/785 (54%), Gaps = 40/785 (5%) Query 2 VTRLLADLGADVLKVEPPGGSPGRHVRPTLAGTSIGFAMHNANKRSAVLNPLDESDRRRF 61 V RL ADLGA+V V G + V P + +IG A++ ++P + R RF Sbjct 23 VGRLFADLGAEVTVVRLQGVTDDATVGPYVDDVAIGTAINRHGMPEVEVDPSNPEGRARF 82 Query 62 LDLAASADIVVDCGLPGQAAAYGASCAELADRYRHLVALSITDFGAAGPRSSWRATDPVL 121 ++ A ADI+++ PG A + L + LV LSI+DFG +W+AT PVL Sbjct 83 TEMLADADILIESTRPGSRAEAVLAVRALRAEHPDLVILSISDFGRDSEFRTWQATGPVL 142 Query 122 YAMSGALSRSGPTAGTPVLPPDGIASATAAVQAAWAVLVAYFNRLRCGTGDYIDFSRFDA 181 +A+S LSRSG P++PP + AA QAA L + +RLR G GD IDFS D Sbjct 143 HALSSELSRSGIPGREPLVPPADLPYQVAAAQAAVMTLSVFLDRLRTGEGDLIDFSVLDG 202 Query 182 VVMALDPPFGAHGQVAAGIRSTGRWRGRPKNQDAYPIYPCRDGYVRFCVMAPRQWRGLRR 241 + ALDPPFG+ G +AG+ + + R + YPI C+DG+VR C+++ RQW G+ Sbjct 203 AMQALDPPFGSAGSASAGVAVSAQQRDWNAEKQRYPIIACKDGHVRICILSKRQWHGMFA 262 Query 242 WLGEPEDFQDPKYDVIGARLAAWPQISVLVAKLCAEKTMKELVAAGQALGVPITAVLTPS 301 +G PE+F DP YD +G R + P + + + CA+KT +L A QA GVP AVLT S Sbjct 263 LMGSPEEFADPSYDKLGKRFHS-PHLLEAIERFCADKTRADLEARCQAHGVPAAAVLTLS 321 Query 302 RILASEHFQAVGAITDAELVPGVRTGVPTGYFVVDGKRAG------FRTPAPAAGQDEPR 355 L +EHF A G DAEL PG+ +P G +DG RA R+P PA Sbjct 322 EALNAEHFTARGFFHDAELAPGLVAPMPAGVSEIDGHRASAQNSPTTRSPRPAE------ 375 Query 356 WLADPAPVPPPSGRVG-GYPFEGLRILDLGIIVAGGELSRLFGDLGAEVIKVESADHPDG 414 AP+ R G G P EG+R+LDLG+IV G + +RLFGDLGA+V+K+E + H DG Sbjct 376 -----APLLASRPRRGQGLPLEGIRVLDLGVIVVGADTARLFGDLGADVVKIEHSAHMDG 430 Query 415 LRQTRVGDAMSESFAWTHRNHLALGLDLRNSEGKAIFGRLVAESDAVFANFKPGTLTSLG 474 LR R AM++ FA HRN ++G+DLR EG+ + RLVA+SD V N+KPG +LG Sbjct 431 LRIGRP-TAMTQPFAAGHRNKRSIGIDLRVEEGRELAHRLVAQSDVVLTNYKPGVAEALG 489 Query 475 FSYDVLHAFNPRIVLAGSSAFGNRGPWSTRMGYGPLVRAATGVTRVWTSDEAQPDNSRHP 534 Y LH NP IV+ SSAFG GPW+ R+GYGPLVRAA G T +WT +PD Sbjct 490 MDYATLHRINPDIVVVDSSAFGPTGPWAKRLGYGPLVRAAVGFTNLWTY-PGEPDT---- 544 Query 535 FYDATTIFPDHVVGRVGALLALAALIHRDRTGGGAHVHISQAEVVVNQLDTMFVAEAA-R 593 F D T++PDHV R+G L ALA L+ R+R G G ISQAEV+++ L A+A R Sbjct 545 FCDTVTVYPDHVAARIGTLSALALLLRRERAGEGGSASISQAEVMLSHLAADIAADALQR 604 Query 594 ATDVAEIHPDTSVHAVYPCAGDDEWCVISIRSDDEWRRATSVFGQPELANDPRFGASRSR 653 + + +Y GDD W I++R D + V G A P Sbjct 605 GGHTSTATTPDAPWGLYRTEGDDHWVAITVRDDADRSALAGVVGHS--AGQP-------- 654 Query 654 VANRSELVAAVSAWTSTRTPVQAAGALQAAGVAAGPMNRPSDILEDPQLIERNLFRDMVH 713 + L AV W + R+ + A LQ+AGV AG + ++ +R FR+ +H Sbjct 655 ----TSLDDAVRVWAAQRSHMDAMTELQSAGVPAGAVLHAHEVPGWAYYEQRRTFREELH 710 Query 714 PLIARPLPAETGPAPFRHIPQAPQRPAPLPGQDSVQICRKLLGMTADETERLINERVMFG 773 P + P E H+P P APL G+ + I +LLG+ A + L+ V+ Sbjct 711 PHASEPFMMENVQIHCDHVPDPPLGQAPLLGEQTADIAAELLGLDAADIASLLERGVLEN 770 Query 774 PAVTA 778 PA A Sbjct 771 PAREA 775 >gi|126438219|ref|YP_001073910.1| L-carnitine dehydratase/bile acid-inducible protein F [Mycobacterium sp. JLS] gi|126238019|gb|ABO01420.1| L-carnitine dehydratase/bile acid-inducible protein F [Mycobacterium sp. JLS] Length=786 Score = 474 bits (1220), Expect = 2e-131, Method: Compositional matrix adjust. Identities = 309/780 (40%), Positives = 426/780 (55%), Gaps = 33/780 (4%) Query 2 VTRLLADLGADVLKVEPPGGSPGRHVRPTLAGTSIGFAMHNANKRSAVLNPLDESD---R 58 + RLLADLGA V V G + V P T+I N+R +D S R Sbjct 25 IGRLLADLGAHVTAVGLAGVTAHAPVGPVSLATAI-------NRRGVAAVDIDTSTPAGR 77 Query 59 RRFLDLAASADIVVDCGLPGQAAAYGASCAELADRYRHLVALSITDFGAAGPRSSWRATD 118 +++ DL +AD++++ PG +A + EL + L+ LS++DFG S+W+AT Sbjct 78 QQWTDLLGAADVLIEDTRPGSSAERLLAVHELRTAHPGLIVLSLSDFGRDSDFSTWQATT 137 Query 119 PVLYAMSGALSRSGPTAGTPVLPP-DGIASATAAVQAAWAVLVAYFNRLRCGTGDYIDFS 177 PVL+A++ LSRSG P++PP + + AA QA AVL +RLR G GD IDF+ Sbjct 138 PVLHALTSELSRSGIPGRAPLVPPGEQLPYHVAAAQAGVAVLAVLLDRLRTGIGDRIDFA 197 Query 178 RFDAVVMALDPPFGAHGQVAAGIRSTGRWRGRPKNQDAYPIYPCRDGYVRFCVMAPRQWR 237 + + ALDPPFG G +AG+ + + R + YPI PC+DGY+R C++A RQW Sbjct 198 ILEGAMQALDPPFGTMGTASAGVPTAQQQRNWDAERLRYPIVPCQDGYIRICLLAKRQWH 257 Query 238 GLRRWLGEPEDFQDPKYDVIGARLAAWPQISVLVAKLCAEKTMKELVAAGQALGVPITAV 297 G+ W+G PE+F DPK++ + RL + P + + A CA+KT EL GQ GVP AV Sbjct 258 GMFEWMGRPEEFADPKFEGLLDRLTSIPLWAAIEA-FCADKTRNELEHEGQRHGVPTAAV 316 Query 298 LTPSRILASEHFQAVGAITDAELVPGVRTGVPTGYFVVDGKRAGFRT-PAPAAGQDEPRW 356 L+ + LA+E A G D EL PG+ VP G +DG RA T P P A + Sbjct 317 LSLTEALATEQVVARGFFGDTELAPGLVAPVPRGVVEIDGCRASAGTAPDPGAPTLQ--- 373 Query 357 LADPAPVPPPSGRVG-GYPFEGLRILDLGIIVAGGELSRLFGDLGAEVIKVESADHPDGL 415 APV R G P EGLR+LDLG+IV G + RLFGDLGA+VIK+E+A PDG+ Sbjct 374 ---GAPVLEQRPRTDQGLPLEGLRVLDLGVIVVGADTGRLFGDLGADVIKIENAAFPDGM 430 Query 416 RQTRVGDAMSESFAWTHRNHLALGLDLRNSEGKAIFGRLVAESDAVFANFKPGTLTSLGF 475 R R M+ SFA HRN A+G+DLR++EG+ + RLV E+D V NFKPG +L Sbjct 431 RPGR--RPMNASFAGGHRNKRAIGIDLRSAEGRELAHRLVREADVVLTNFKPGVAAALAM 488 Query 476 SYDVLHAFNPRIVLAGSSAFGNRGPWSTRMGYGPLVRAATGVTRVWTSDEAQPDNSRHPF 535 YD L + NP IV+ SSAFG GPW+ R+GYGPLVRAA G T+ W + PD F Sbjct 489 DYDTLKSVNPGIVVVDSSAFGPTGPWAQRLGYGPLVRAAAGFTKQWVY-PSDPDE----F 543 Query 536 YDATTIFPDHVVGRVGALLALAALIHRDRTGGGAHVHISQAEVVVNQLDTMFVAEAARAT 595 D T++PDHV R+G L AL+ L+ R+RTG G I+Q+EV+++ L EA Sbjct 544 CDTVTVYPDHVSARIGVLAALSLLLRRERTGLGGSASIAQSEVMLSHLAAEIAGEA--LI 601 Query 596 DVAEIHPDTSVH----AVYPCAGDDEWCVISIRSDDEWRRATSVFGQPELANDPRFGASR 651 D H ++ GDD W +++R D +W+ V G+ +LA DP+ G Sbjct 602 RAGHQRSDAQDHDAPWGLFRADGDDAWVAVTVRDDADWQALCRVLGRQDLAGDPQLGDRT 661 Query 652 SRVANRSELVAAVSAWTSTRTPVQAAGALQAAGVAAGPMNRPSDILEDPQLIERNLFRDM 711 R NR+ + AV+ WT +P A LQAAGV AG + +++ +R FR+ Sbjct 662 GRDRNRTRIDEAVTDWTVRHSPGHAMDLLQAAGVPAGAVMHAAELPGWEFYAQRRAFREE 721 Query 712 VHPLIARPLPAETGPAPFRHIPQAPQRPAPLPGQDSVQICRKLLGMTADETERLINERVM 771 +HP P E I P APL G+ +V+I LLG+ L+ V+ Sbjct 722 LHPHGREPYVLENAQLHSERIADPPLGQAPLLGEHTVEIATTLLGLDEAAVADLVERGVL 781 >gi|108802237|ref|YP_642434.1| L-carnitine dehydratase/bile acid-inducible protein F [Mycobacterium sp. MCS] gi|119871390|ref|YP_941342.1| L-carnitine dehydratase/bile acid-inducible protein F [Mycobacterium sp. KMS] gi|108772656|gb|ABG11378.1| L-carnitine dehydratase/bile acid-inducible protein F [Mycobacterium sp. MCS] gi|119697479|gb|ABL94552.1| L-carnitine dehydratase/bile acid-inducible protein F [Mycobacterium sp. KMS] Length=786 Score = 473 bits (1218), Expect = 4e-131, Method: Compositional matrix adjust. Identities = 310/778 (40%), Positives = 425/778 (55%), Gaps = 29/778 (3%) Query 2 VTRLLADLGADVLKVEPPGGSPGRHVRPTLAGTSIGFAMHNANKRSAVLNPLDESD---R 58 + RLLADLGA V V G + P T+I N+R +D S R Sbjct 25 IGRLLADLGAHVTAVGLAGATAHAAGGPVSLATAI-------NRRGVAAVDIDTSTPAGR 77 Query 59 RRFLDLAASADIVVDCGLPGQAAAYGASCAELADRYRHLVALSITDFGAAGPRSSWRATD 118 +++ DL +AD++++ PG +A + EL + L+ LS++DFG S W+AT Sbjct 78 QQWTDLLGAADVLIEDTRPGSSAERLLAVHELRTAHPGLIVLSLSDFGRDSDFSGWQATT 137 Query 119 PVLYAMSGALSRSGPTAGTPVLPP-DGIASATAAVQAAWAVLVAYFNRLRCGTGDYIDFS 177 PVL+A++ LSRSG P++PP + + AA QA AVL +RLR G GD IDF+ Sbjct 138 PVLHALTSELSRSGIPGRAPLVPPGEQLPYHVAAAQAGVAVLAVLLDRLRTGIGDRIDFA 197 Query 178 RFDAVVMALDPPFGAHGQVAAGIRSTGRWRGRPKNQDAYPIYPCRDGYVRFCVMAPRQWR 237 + + ALDPPFG G +AG+ + + R + YPI PC+DGY+R C++A RQW Sbjct 198 ILEGAMQALDPPFGTMGTASAGVPTAQQQRNWDAERLRYPIVPCQDGYIRICLLAKRQWH 257 Query 238 GLRRWLGEPEDFQDPKYDVIGARLAAWPQISVLVAKLCAEKTMKELVAAGQALGVPITAV 297 G+ W+G PE+F DPK++ + RL + P + + A CA+KT EL GQ GVP AV Sbjct 258 GMFEWMGRPEEFADPKFEGLLDRLTSIPLWAAIEA-FCADKTRNELEHEGQRHGVPTAAV 316 Query 298 LTPSRILASEHFQAVGAITDAELVPGVRTGVPTGYFVVDGKRAGFRT-PAPAAGQDEPRW 356 L+ + LA+E A G D EL PG+ VP G +DG RA T P P A + Sbjct 317 LSLTEALATEQVVARGFFGDTELAPGLVAPVPRGVVEIDGCRASAGTAPDPGAPTLQ--- 373 Query 357 LADPAPVPPPSGRVG-GYPFEGLRILDLGIIVAGGELSRLFGDLGAEVIKVESADHPDGL 415 APV R G P EGLR+LDLG+IV G + RLFGDLGA+VIK+E+A PDG+ Sbjct 374 ---GAPVLEQRPRTDQGLPLEGLRVLDLGVIVVGADTGRLFGDLGADVIKIENAAFPDGM 430 Query 416 RQTRVGDAMSESFAWTHRNHLALGLDLRNSEGKAIFGRLVAESDAVFANFKPGTLTSLGF 475 R R M+ SFA HRN A+G+DLR++EG+ + RLV E+D V NFKPG +L Sbjct 431 RPGR--RPMNASFAGGHRNKRAIGIDLRSAEGRELAHRLVREADVVLTNFKPGVAAALAM 488 Query 476 SYDVLHAFNPRIVLAGSSAFGNRGPWSTRMGYGPLVRAATGVTRVWTSDEAQPDNSRHPF 535 YD L + NP IV+ SSAFG GPW+ R+GYGPLVRAA G T+ W + PD F Sbjct 489 DYDTLKSVNPGIVVVDSSAFGPTGPWAQRLGYGPLVRAAAGFTKQWVY-PSDPDE----F 543 Query 536 YDATTIFPDHVVGRVGALLALAALIHRDRTGGGAHVHISQAEVVVNQLDTMFVAEA-ARA 594 D T++PDHV R+G L AL+ L+ R+RTG G I+Q+EV+++ L EA RA Sbjct 544 CDTVTVYPDHVSARIGVLAALSLLLRRERTGLGGSASIAQSEVMLSHLAAEIAGEALIRA 603 Query 595 TDVAEIHPDTSV-HAVYPCAGDDEWCVISIRSDDEWRRATSVFGQPELANDPRFGASRSR 653 PD ++ GDD W +++R D +W+ V G+ +LA DP G R Sbjct 604 GHQRSDAPDHDAPWGLFRADGDDAWVAVTVRDDADWQALCRVLGRQDLAGDPELGDRTGR 663 Query 654 VANRSELVAAVSAWTSTRTPVQAAGALQAAGVAAGPMNRPSDILEDPQLIERNLFRDMVH 713 NR+ + AV+ WT +P A LQAAGV AG + +++ +R FR+ +H Sbjct 664 DRNRTRIDGAVTDWTVRHSPGDAMDLLQAAGVPAGAVMHAAELPGWEFYAQRRAFREELH 723 Query 714 PLIARPLPAETGPAPFRHIPQAPQRPAPLPGQDSVQICRKLLGMTADETERLINERVM 771 P P E I P APL G+ +V+I LLG+ L+ V+ Sbjct 724 PHGREPYVLENAQLHSERIADPPLGQAPLLGEHTVEIATTLLGLDEAAVADLVERGVL 781 >gi|296283480|ref|ZP_06861478.1| acyl-CoA transferases/carnitine dehydratase [Citromicrobium bathyomarinum JL354] Length=749 Score = 468 bits (1204), Expect = 2e-129, Method: Compositional matrix adjust. Identities = 290/770 (38%), Positives = 400/770 (52%), Gaps = 64/770 (8%) Query 2 VTRLLADLGADVLKVEPPGGSPGRHVRPTLAGTSIGFAMHNANKRSAVLNPLDESDRRRF 61 +T LA LGA+V +V P S + FA+ + R+ Sbjct 25 ITSYLAHLGAEVDRVRPVDASDPGALAANAGKVWRSFALDSEEGRA-------------- 70 Query 62 LDLAASADIVVDCGLPGQAAAYGASCAELADRYRHLVALSITDFGAAGPRSSWRATDPVL 121 LA +A IVV + A EL + LV ++++DFG G S WR ++ VL Sbjct 71 --LARAAHIVV------AGTEHDALLKELRGQRPELVTMTVSDFGMTGSLSEWRGSNAVL 122 Query 122 YAMSGALSRSGPTAGTPVLPPDGIASATAAVQAAWAVLVAYFNRLRCGTGDYIDFSRFDA 181 +A+SG LSRSG P+LPP +A A+VQAA+A+ + LR G G + DFS + Sbjct 123 HALSGELSRSGIRGREPLLPPGDLAYQCASVQAAYALCGGLYRALRSGRGAHFDFSALEG 182 Query 182 VVMALDPPFGAHGQVAAGIRSTGRWRGRPKNQDAYPIYPCRDGYVRFCVMAPRQWRGLRR 241 V ALDP FG G G + R RP+ YPI+ C DG+VR C+++ RQWR + Sbjct 183 AVQALDPGFGISGSATLGKPAGLLSRDRPREGFQYPIFSCADGFVRICLLSKRQWRSMFE 242 Query 242 WLGEPEDFQDPKYDVIGARLAAWPQISVLVAKLCAEKTMKELVAAGQALGVPITAVLTPS 301 WLG PE F P++D R + P + +A ++ +L GQA GVPI A+L+ Sbjct 243 WLGRPEQFASPEFDRTSVRYKS-PDLLPFIADFFRDRNRADLEREGQAHGVPIAAMLSLL 301 Query 302 RILASEHFQAVGAITDAELVPGVRTGVPTGYFVVDGKRAGFRTPAPAAGQDEPRWLADPA 361 L +EH +A A+ V +P G +DG RA F +AG Sbjct 302 EFLETEHVRARDALKSVT-VGQAELTLPRGVQTIDGARADFDAGEQSAG----------- 349 Query 362 PVPPPSGRVGGYPFEGLRILDLGIIVAGGELSRLFGDLGAEVIKVESADHPDGLRQTRVG 421 P P S PFEGL+++DLG+IV G E +R+ GD+GA+VIK+ES PDG RQ+ + Sbjct 350 PFPEASDSCA-LPFEGLKVIDLGVIVVGAEQARMLGDMGADVIKMESRSFPDGNRQSYLD 408 Query 422 DAMSESFAWTHRNHLALGLDLRNSEGKAIFGRLVAESDAVFANFKPGTLTSLGFSYDVLH 481 MS SFA HRN ++GLDLR+ G+ +F LVA +D V +NFKPGT+ LG D L Sbjct 409 FGMSVSFAAGHRNKRSIGLDLRSERGREVFLDLVARADVVCSNFKPGTMDKLGLDQDTLR 468 Query 482 AFNPRIVLAGSSAFGNRGPWSTRMGYGPLVRAATGVTRVWTSDEAQPDNSRHPFYDATTI 541 NPRI+L+ SSAFG+ GPWS RMGYGPLVRA+TG+ W PD+ F D TI Sbjct 469 KANPRIILSESSAFGSTGPWSNRMGYGPLVRASTGLALAWR----YPDDPTG-FSDTITI 523 Query 542 FPDHVVGRVGALLALAALIHRDRTGGGAHVHISQAEVVVNQLDTMFVAEAARATDVAEIH 601 +PDHV GR+ A+ +A LI R RTG G ++QAEV + F A+ AR D E Sbjct 524 YPDHVAGRICAIGVVALLIRRLRTGRGGTTAVAQAEVALKH----FAAQIARGGDAGE-- 577 Query 602 PDTSVHAVYPCAGDDEWCVISIRSDDEWRRATSVFGQPELANDPRFGASRSRVANRSELV 661 + V+ AGDDEWCV+ +++ + + G V + ++ Sbjct 578 -SAAGRLVFAAAGDDEWCVVDPQTEKQRLALAELLG----------------VTDLDRIL 620 Query 662 AAVSAWTSTRTPVQAAGALQAAGVAAGPMNRPSDILEDPQLIERNLFRDMVHPLIARPLP 721 A+ W + R P +AA ALQ AG+ A PM R +D+ E P ER +R HP + + Sbjct 621 GALEEWVAARPPEKAAQALQQAGIPAAPMLRVADLPEHPFYTERQFYRVEDHPWLQETVR 680 Query 722 AETGPAPFRHIPQAPQRPAPLPGQDSVQICRKLLGMTADETERLINERVM 771 AE A IP P RPAPL G+ S ++ + LG + LI + V+ Sbjct 681 AERCVAKTEDIPAPPTRPAPLTGEQSEEVLKDWLGARPADIAALIADHVL 730 >gi|120405268|ref|YP_955097.1| L-carnitine dehydratase/bile acid-inducible protein F [Mycobacterium vanbaalenii PYR-1] gi|119958086|gb|ABM15091.1| L-carnitine dehydratase/bile acid-inducible protein F [Mycobacterium vanbaalenii PYR-1] Length=790 Score = 466 bits (1200), Expect = 5e-129, Method: Compositional matrix adjust. Identities = 309/780 (40%), Positives = 431/780 (56%), Gaps = 31/780 (3%) Query 2 VTRLLADLGADVLKVEPPGGSPGRHVRPTLAGTSIGFAMHNANKRSAVLNPLDESDRRRF 61 V RL ADLGA V + G + V P + ++G A++ + ++P + R+RF Sbjct 31 VGRLFADLGAHVTALHLRGVTGDEPVGPHVDSVAVGSAINRHGMDTVEIDPGTPTGRQRF 90 Query 62 LDLAASADIVVDCGLPGQAAAYGASCAELADRYRHLVALSITDFGAAGPRSSWRATDPVL 121 +L A ADI+++ PG A S E+ D++ LV LSI+DFG +W+A+ PV Sbjct 91 AELVAGADILIENTRPGSPAETALSIREIRDQHPALVILSISDFGRDTDYRNWQASGPVF 150 Query 122 YAMSGALSRSGPTAGTPVLPPDGIASATAAVQAAWAVLVAYFNRLRCGTGDYIDFSRFDA 181 +A++ LSRSG P++PP + AA QAA L + +RLR G GD IDFS D Sbjct 151 HALTSELSRSGIPGREPLIPPADLPYQVAAAQAAVMTLSLFLDRLRTGEGDLIDFSVLDG 210 Query 182 VVMALDPPFGAHGQVAAGIRSTGRWRGRPKNQDAYPIYPCRDGYVRFCVMAPRQWRGLRR 241 + LDPPFG G +AG+ + + R + YPI PC+DG+VR C+++ RQW G+ Sbjct 211 AMQTLDPPFGTAGSASAGVAVSAQQRDWNAERQRYPIIPCKDGHVRICILSRRQWHGMFA 270 Query 242 WLGEPEDFQDPKYDVIGARLAAWPQISVLVAKLCAEKTMKELVAAGQALGVPITAVLTPS 301 +G PE+F DP YD +G R + P + + + CA+KT EL AAGQA GVP A+LT + Sbjct 271 LMGSPEEFADPSYDKLGKRFRS-PHLLEAIERFCADKTRAELEAAGQAHGVPTAALLTLA 329 Query 302 RILASEHFQAVGAITDAELVPGVRTGVPTGYFVVDGKRAGFRTPAPAAGQDEPRWLADPA 361 L ++HF A G D EL PGV VP G VDG RA A + + + D A Sbjct 330 EALNADHFTARGFFRDVELAPGVVAPVPVGVSEVDGHRASALQSAARSSEID---RLDTA 386 Query 362 PVPPPSGRVG-GYPFEGLRILDLGIIVAGGELSRLFGDLGAEVIKVESADHPDGLRQTRV 420 P+ R G G P EG+R+LDLG+IV G + +RLFGDLGA+V+K+E + HPDGLR ++ Sbjct 387 PLLANRRRAGQGLPLEGIRVLDLGVIVVGADTARLFGDLGADVVKIEHSAHPDGLRVGKL 446 Query 421 GDAMSESFAWTHRNHLALGLDLRNSEGKAIFGRLVAESDAVFANFKPGTLTSLGFSYDVL 480 +M++ FA HRN ++G+DLR+ EG+ + RLV +SD V NFKPG +LG Y L Sbjct 447 -TSMTQPFAAGHRNKRSIGIDLRSDEGRRLAHRLVEQSDVVLTNFKPGVADALGMDYATL 505 Query 481 HAFNPRIVLAGSSAFGNRGPWSTRMGYGPLVRAATGVTRVWTS-DEAQPDNSRHPFYDAT 539 NP IV+ SSAFG GPW+ R+GYGPLVRAA G T +W EA+ + D Sbjct 506 RQVNPNIVVVDSSAFGPTGPWAKRLGYGPLVRAAVGFTDLWVYPGEAE------TYCDTV 559 Query 540 TIFPDHVVGRVGALLALAALIHRDRTGGGAHVHISQAEVVVNQLDTMFVAEAAR---ATD 596 T++PDHV R+GAL A+A L+ R+RTG G ISQAEV+++ L A+A T Sbjct 560 TVYPDHVAARIGALAAMALLLRRERTGAGGSASISQAEVMLSHLAADIAADALLRSGHTH 619 Query 597 VAEIHPDTSVHAVYPCAGDDEWCVISIRSDDEWRRATSVFGQPELANDPRFGASRSRVAN 656 PD ++P GDD W I++R D + R V G F A+ Sbjct 620 TGASRPDAPW-GLFPAQGDDRWVAITVRDDADRRALGEVVG---------FTG-----AD 664 Query 657 RSELVAAVSAWTSTRTPVQAAGALQAAGVAAGPMNRPSDILEDPQLIERNLFRDMVHPLI 716 R AV AWT+ R+ ++A LQAAGV AG + +I +R FR+ +HP Sbjct 665 RQLFDDAVRAWTTQRSHLEAMEQLQAAGVPAGAVLHADEIPGWGYYEQRRAFREELHPYG 724 Query 717 ARPLPAETGPAPFRHIPQAPQRPAPLPGQDSVQICRKLLGMTADETERLINERVMFGPAV 776 + P E H+ P APL G+ +V+I +LLG+ + + L V+ P V Sbjct 725 SAPFMMENVQIHCDHVADPPLGQAPLLGEQTVEIAAELLGLDPAQIDDLHRRGVLETPEV 784 >gi|315443384|ref|YP_004076263.1| acyl-CoA transferase/carnitine dehydratase [Mycobacterium sp. Spyr1] gi|315261687|gb|ADT98428.1| predicted acyl-CoA transferase/carnitine dehydratase [Mycobacterium sp. Spyr1] Length=784 Score = 464 bits (1195), Expect = 2e-128, Method: Compositional matrix adjust. Identities = 301/752 (41%), Positives = 407/752 (55%), Gaps = 40/752 (5%) Query 2 VTRLLADLGADVLKVEPPGGSPGRHVRPTLAGTSIGFAMHNANKRSAVLNPLDESDRRRF 61 V RL ADLGA+V V G + V P + +IG A++ ++P + R RF Sbjct 23 VGRLFADLGAEVTVVRLQGVTDDATVGPYVDDVAIGTAINRHGMPEVEVDPSNPEGRARF 82 Query 62 LDLAASADIVVDCGLPGQAAAYGASCAELADRYRHLVALSITDFGAAGPRSSWRATDPVL 121 ++ A ADI+++ PG A + L + LV LSI+DFG +W+AT PVL Sbjct 83 TEMLADADILIESTRPGSRAEAVLAVRALRAEHPDLVILSISDFGRDSEFRTWQATGPVL 142 Query 122 YAMSGALSRSGPTAGTPVLPPDGIASATAAVQAAWAVLVAYFNRLRCGTGDYIDFSRFDA 181 +A+S LSRSG P++PP + AA QAA L + +RLR G GD IDFS D Sbjct 143 HALSSELSRSGIPGREPLVPPADLPYQVAAAQAAVMTLSVFLDRLRTGEGDLIDFSVLDG 202 Query 182 VVMALDPPFGAHGQVAAGIRSTGRWRGRPKNQDAYPIYPCRDGYVRFCVMAPRQWRGLRR 241 + ALDPPFG+ G +AG+ + + R + YPI C+DG+VR C+++ RQW G+ Sbjct 203 AMQALDPPFGSAGSASAGVAVSAQQRDWNAEKQRYPIIACKDGHVRICILSKRQWHGMFA 262 Query 242 WLGEPEDFQDPKYDVIGARLAAWPQISVLVAKLCAEKTMKELVAAGQALGVPITAVLTPS 301 +G PE+F DP YD +G R + P + + + CA+KT +L A QA GVP AVLT S Sbjct 263 LMGSPEEFADPSYDKLGKRFHS-PHLLEAIERFCADKTRADLEARCQAHGVPAAAVLTLS 321 Query 302 RILASEHFQAVGAITDAELVPGVRTGVPTGYFVVDGKRAG------FRTPAPAAGQDEPR 355 L +EHF A G DAEL PGV +P G +DG RA R+P PA Sbjct 322 EALNAEHFTARGFFHDAELAPGVVAPMPAGVSEIDGHRASAQNSPTTRSPRPAE------ 375 Query 356 WLADPAPVPPPSGRVG-GYPFEGLRILDLGIIVAGGELSRLFGDLGAEVIKVESADHPDG 414 AP+ R G G P EG+R+LDLG+IV G + +RLFGDLGA+V+K+E + H DG Sbjct 376 -----APLLASRPRRGQGLPLEGIRVLDLGVIVVGADTARLFGDLGADVVKIEHSAHMDG 430 Query 415 LRQTRVGDAMSESFAWTHRNHLALGLDLRNSEGKAIFGRLVAESDAVFANFKPGTLTSLG 474 LR R AM++ FA HRN ++G+DLR EG+ + RLVA+SD V N+KPG +LG Sbjct 431 LRIGRP-TAMTQPFAAGHRNKRSIGIDLRVEEGRELAHRLVAQSDVVLTNYKPGVAEALG 489 Query 475 FSYDVLHAFNPRIVLAGSSAFGNRGPWSTRMGYGPLVRAATGVTRVWTSDEAQPDNSRHP 534 Y LH NP IV+ SSAFG GPW+ R+GYGPLVRAA G T +WT +PD Sbjct 490 MDYATLHRINPDIVVVDSSAFGPTGPWAKRLGYGPLVRAAVGFTNLWTY-PGEPDT---- 544 Query 535 FYDATTIFPDHVVGRVGALLALAALIHRDRTGGGAHVHISQAEVVVNQLDTMFVAEAA-R 593 F D T++PDHV R+G L ALA L+ R+RTG G ISQAEV+++ L A+A R Sbjct 545 FCDTVTVYPDHVAARIGTLSALALLLRRERTGEGGSASISQAEVMLSHLAADIAADALQR 604 Query 594 ATDVAEIHPDTSVHAVYPCAGDDEWCVISIRSDDEWRRATSVFGQPELANDPRFGASRSR 653 + + +Y GDD W I++R D + V G A P Sbjct 605 GGHTSTATTPDAPWGLYRTEGDDHWVAITVRDDADRSALAGVVGHS--AGQP-------- 654 Query 654 VANRSELVAAVSAWTSTRTPVQAAGALQAAGVAAGPMNRPSDILEDPQLIERNLFRDMVH 713 + L AV W + R+ + A LQ+AGV AG + ++ +R FR+ +H Sbjct 655 ----TSLDDAVRVWAAQRSHMDAMTELQSAGVPAGAVLHAHEVPGWAYYEQRRTFREELH 710 Query 714 PLIARPLPAETGPAPFRHIPQAPQRPAPLPGQ 745 P + P E H+P P APL G+ Sbjct 711 PHASEPFMMENVQIHCDHVPDPPLGQAPLLGR 742 >gi|302528387|ref|ZP_07280729.1| L-carnitine dehydratase/bile acid-inducible protein F [Streptomyces sp. AA4] gi|302437282|gb|EFL09098.1| L-carnitine dehydratase/bile acid-inducible protein F [Streptomyces sp. AA4] Length=611 Score = 402 bits (1034), Expect = 9e-110, Method: Compositional matrix adjust. Identities = 253/577 (44%), Positives = 330/577 (58%), Gaps = 20/577 (3%) Query 4 RLLADLGADVLKVEPPGGSPGRHVRPTLAGTSIGFAMHNANKRSAVLNPLDESDRRRFLD 63 RLLADLGA V +V PG + R P + G +IG A+ A P + Sbjct 27 RLLADLGACVTRVVLPGVTGERTTGPVVDGVAIGTAIDRHGFAHATAEPGSHG----WEQ 82 Query 64 LAASADIVVDCGLPGQAAAYGASCAELADRYRHLVALSITDFGAAGPRSSWRATDPVLYA 123 L A AD++++ PG A L R+ LV LSI+DFG R W+AT PV +A Sbjct 83 LLADADLLIETTPPGSPAEELLDVPGLRTRHPALVVLSISDFGRVTTRRRWQATTPVFHA 142 Query 124 MSGALSRSGPTAGTPVLPPDGIASATAAVQAAWAVLVAYFNRLRCGTGDYIDFSRFDAVV 183 ++G LSRSG P+LPP + AA QAA+ + Y +RLR G GD IDFS D + Sbjct 143 LTGELSRSGIPGRAPLLPPGELPYHVAAAQAAFQAVSLYLDRLRTGRGDRIDFSVLDGAM 202 Query 184 MALDPPFGAHGQVAAGIRSTGRWRGRPKNQDAYPIYPCRDGYVRFCVMAPRQWRGLRRWL 243 ALDP FG G AAG+ + RGR + + YPI+PC+DGY+R C+++ RQWRG+ W+ Sbjct 203 QALDPAFGMVGSAAAGVPLSELPRGRTEERHRYPIFPCQDGYIRICLLSRRQWRGMFEWM 262 Query 244 GEPEDFQDPKYDVIGARLAAWPQISVLVAKLCAEKTMKELVAAGQALGVPITAVLTPSRI 303 G P +F DPKYD + R A+ P + + + A +T L GQ GVP AVLT + Sbjct 263 GSPAEFADPKYDQVRERYAS-PDLLPAIGRFFAGRTRASLECEGQRHGVPTAAVLTLAEA 321 Query 304 LASEHFQAVGAITDAELVPGVRTGVPTGYFVVDGKRAGFRTPAPAAGQDEPRWLADPAPV 363 L ++ A G D EL PG+ VP G +DG RA AG D + AP+ Sbjct 322 LHTDQLAARGFFRDTELSPGLVAPVPAGITEIDGHRA-------VAGPDTGARVTG-API 373 Query 364 PPPSGRVG-GYPFEGLRILDLGIIVAGGELSRLFGDLGAEVIKVESADHPDGLRQTRVGD 422 R G G P EG+R+LDLG+IV GG+ RLFGDLGA+V+K+E++ PDG R G Sbjct 374 LAARPRRGEGRPLEGIRVLDLGVIVVGGDTGRLFGDLGADVLKIENSAFPDGSRAALPG- 432 Query 423 AMSESFAWTHRNHLALGLDLRNSEGKAIFGRLVAESDAVFANFKPGTLTSLGFSYDVLHA 482 MS FA HRN A+G++LR+ EG+A+ RLVA+SD V NFKPG + SLG L Sbjct 433 LMSHGFAAGHRNKRAIGVNLRDPEGQALVRRLVAQSDVVLTNFKPGVIASLGLDRAALAE 492 Query 483 FNPRIVLAGSSAFGNRGPWSTRMGYGPLVRAATGVTRVWTSDEAQPDNSRHPFYDATTIF 542 NP IV+ SSAFG GPW+ R+GYGPLVRAATG+T W +P F DA T++ Sbjct 493 VNPGIVVVDSSAFGPTGPWAKRLGYGPLVRAATGLTSEWIY-PGEPGT----FSDAVTVY 547 Query 543 PDHVVGRVGALLALAALIHRDRTGGGAHVHISQAEVV 579 PDHV R+GAL ALA L+ R+R+G G QA + Sbjct 548 PDHVCARIGALAALALLVRRERSGEGGAAKCGQATAL 584 Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 92/358 (26%), Positives = 142/358 (40%), Gaps = 26/358 (7%) Query 374 PFEGLRILDL--GIIVAGGELSRLFGDLGAEVIKVESADHPDGLRQTRVGDAMSESFAWT 431 P G+R+LDL G + A +RL DLGA V +V V D ++ A Sbjct 8 PLSGVRVLDLSSGPMTA---TARLLADLGACVTRVVLPGVTGERTTGPVVDGVAIGTA-I 63 Query 432 HRNHLALGLDLRNSEGKAIFGRLVAESDAVFANFKPGTLTSLGFSYDVLHAFNPRIVLAG 491 R+ A S G + +L+A++D + PG+ L +P +V+ Sbjct 64 DRHGFAHATAEPGSHG---WEQLLADADLLIETTPPGSPAEELLDVPGLRTRHPALVVLS 120 Query 492 SSAFGNRGPWSTRMGYGPLVRAATGVTRVWTSDEAQPDNSRHPFYDATTIFPDHVVGRVG 551 S FG P+ A TG S P R P + P HV Sbjct 121 ISDFGRVTTRRRWQATTPVFHALTG----ELSRSGIP--GRAPLLPPGEL-PYHVAAAQA 173 Query 552 ALLALAALIHRDRTGGGAHVHISQAEVVVNQLDTMF--VAEAARATDVAEI----HPDTS 605 A A++ + R RTG G + S + + LD F V AA ++E+ + Sbjct 174 AFQAVSLYLDRLRTGRGDRIDFSVLDGAMQALDPAFGMVGSAAAGVPLSELPRGRTEERH 233 Query 606 VHAVYPCAGDDEWCVISIRSDDEWRRATSVFGQPELANDPRFGASRSRVANRSELVAAVS 665 + ++PC D + I + S +WR G P DP++ R R A+ +L+ A+ Sbjct 234 RYPIFPC--QDGYIRICLLSRRQWRGMFEWMGSPAEFADPKYDQVRERYAS-PDLLPAIG 290 Query 666 AWTSTRTPVQAAGALQAAGVAAGPMNRPSDILEDPQLIERNLFRDM-VHPLIARPLPA 722 + + RT Q GV + ++ L QL R FRD + P + P+PA Sbjct 291 RFFAGRTRASLECEGQRHGVPTAAVLTLAEALHTDQLAARGFFRDTELSPGLVAPVPA 348 >gi|91976060|ref|YP_568719.1| L-carnitine dehydratase/bile acid-inducible protein F [Rhodopseudomonas palustris BisB5] gi|91682516|gb|ABE38818.1| L-carnitine dehydratase/bile acid-inducible protein F [Rhodopseudomonas palustris BisB5] Length=814 Score = 281 bits (720), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 244/806 (31%), Positives = 368/806 (46%), Gaps = 59/806 (7%) Query 4 RLLADLGADVLKVEPPGGSPGRHVRPTL-AG---TSIGFAMHNANKRSAVLNPLDESDRR 59 +L AD GA+V+KVEPPGG P R + P + AG S FA N NK S + + D Sbjct 25 KLFADFGAEVIKVEPPGGDPDRQIAPLVDAGGRSESATFAWLNTNKYSIIGDLDRPDDTA 84 Query 60 RFLDLAASADIVVDCGLPGQAAAYGASCAELADRYRHLVALSITDFGAAGPRSSWRATDP 119 R L A +D+++D P A S L + L S++ FG GP + ATD Sbjct 85 RIERLLADSDLLLDARHPAAIEASPLSHRRLREVQPGLAITSLSWFGEHGPYRDYLATDS 144 Query 120 VLYAMSGALSRSGPTAGTPVLPPDGIASATAAVQAAWAVLVAYFNRLRCGTGDYIDFSRF 179 V +++G + GP G PVLP DG + A + A L + R G + + F Sbjct 145 VCRSLAGLVKLVGPAEGPPVLPRDGQIAVIAGLTAFIPTLAGLYARADQGARRFA-VNAF 203 Query 180 DAVVMALDPPFGAHGQVAAGIRSTGRWRGRPKNQDAYPI--YPCRDGYVRFCVMAPRQWR 237 +A++ + F + AG ST G + +P+ Y +DG++ V+ P QW Sbjct 204 EAMLQITE--FDIALALEAG--STRPRIGLNRFGRGFPVGNYATKDGWLGVTVVTPAQWL 259 Query 238 GLRRWLGEPEDFQDPKYDVIGARLAAWPQISVLVAKLCAEKTMKELVAAGQALGVPITAV 297 G +G PE DP+Y R +++ ++ + KT E G L +P+ + Sbjct 260 GFCAMIGLPELGPDPRYSATADRFIHADELNSIIRPVLMHKTALEWFERGIELRLPLALI 319 Query 298 LTPSRILASEHFQAVGAIT---------DAELVPGVRTGVPTGYFVVDGKRAGFRTPAPA 348 +++LA + GA DA ++P T P GK G AP Sbjct 320 PDMAQLLAQPVMRERGAFAKVEIGASSFDAPVLPQRLTKSP-------GKPNGR---APR 369 Query 349 AGQDE-----PRWLADPAPVPPPSGRVGGYPFEGLRILDLGIIVAGGELSRLFGDLGAEV 403 AG+ PR V P P G+RI+DL + AG R GDLGA++ Sbjct 370 AGEHNDAELSPRRRTAERAVRPNEA----LPLSGIRIVDLTMGWAGPSAVRQLGDLGADI 425 Query 404 IKVESADHPDGLRQT-----RVGDAMSESFAW---THRNHLALGLDLRNSEGKAIFGRLV 455 IKVES +PD R T + E W +RN + LDL +G+A+ +L+ Sbjct 426 IKVESCQYPDWFRGTDPRGPYHPERTYEKTYWFQTMNRNKRGITLDLTTDDGRAVLKQLL 485 Query 456 AESDAVFANFKPGTLTSLGFSYDVLHAFNPRIVLAGSSAFGNRGPWSTRMGYGPLVRAAT 515 A +DAV N+ L LG + A NPR+V+ AFG G WS YG + A+ Sbjct 486 AGADAVIDNYAADVLPRLGLDVAAMQAINPRLVVVTMPAFGITGRWSAARAYGSTLEQAS 545 Query 516 GVTRVWTSDEAQPDNSRHPFYDATTIFPDHVVGRVGALLALAALIHRDRTGGGAHVHISQ 575 G+ V T + P H D V G A + L+H+ RTG G H+ +SQ Sbjct 546 GLPSV-TGRDGDPPTMLH------AALGDPVGGLNAAAALMLGLMHQKRTGDGQHIDLSQ 598 Query 576 AEVVVNQLDTMFVAEAARATDVAEI---HPDTSVHAVYPCAGDDEWCVISIRSDDEWRRA 632 E ++ L + + ++A I HP +PCAGDD+W +++++D +W+ Sbjct 599 VECMLPMLASSIIEQSATGHTSPRIGNRHPRFVPSGCFPCAGDDQWVTLAVQTDAQWKAL 658 Query 633 TSVFGQPELANDPRFGASRSRVANRSELVAAVSAWTSTRTPVQAAGALQAAGVAAGPMNR 692 V +P+ A DP + R A+ + AV WTS+ P A LQ AG+AAG Sbjct 659 CRVMHRPDFAADPSLATADGRRADEDRIEIAVRHWTSSVRPELAMVTLQEAGIAAGVARL 718 Query 693 PSDILEDPQLIERNLFRDMVHPLI-ARPLPAETGPAPFRHIPQAPQRPAPLPGQDSVQIC 751 P D++ DP L++ ++ +V + A LP+ + F +P +R AP GQ + ++ Sbjct 719 PIDLVGDPHLLKTGHWQPVVRRFMGAHLLPSVSYREDFADLPYPIERLAPTLGQHNDEVL 778 Query 752 RKLLGMTADETERLINERVMFGPAVT 777 R+ LG++ E E L + V+ A T Sbjct 779 RE-LGLSDAEIEGLHDRGVIGNVATT 803 Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 76/307 (25%), Positives = 127/307 (42%), Gaps = 12/307 (3%) Query 374 PFEGLRILDLGIIVAGGELSRLFGDLGAEVIKVE-SADHPDGLRQTRV---GDAMSESFA 429 P LR++++G A +LF D GAEVIKVE PD V G + S +FA Sbjct 5 PLSELRVVEIGSGDALAYCGKLFADFGAEVIKVEPPGGDPDRQIAPLVDAGGRSESATFA 64 Query 430 WTHRNHLALGLDLRNSEGKAIFGRLVAESDAVFANFKPGTLTSLGFSYDVLHAFNPRIVL 489 W + N ++ DL + A RL+A+SD + P + + S+ L P + + Sbjct 65 WLNTNKYSIIGDLDRPDDTARIERLLADSDLLLDARHPAAIEASPLSHRRLREVQPGLAI 124 Query 490 AGSSAFGNRGPWSTRMGYGPLVRAATGVTRVWTSDEAQPDNSRHPFYDATTIFPDHVVGR 549 S FG GP+ + + R+ G+ ++ E P R D + G Sbjct 125 TSLSWFGEHGPYRDYLATDSVCRSLAGLVKLVGPAEGPPVLPR----DGQIAV---IAGL 177 Query 550 VGALLALAALIHR-DRTGGGAHVHISQAEVVVNQLDTMFVAEAARATDVAEIHPDTSVHA 608 + LA L R D+ V+ +A + + + D EA ++ Sbjct 178 TAFIPTLAGLYARADQGARRFAVNAFEAMLQITEFDIALALEAGSTRPRIGLNRFGRGFP 237 Query 609 VYPCAGDDEWCVISIRSDDEWRRATSVFGQPELANDPRFGASRSRVANRSELVAAVSAWT 668 V A D W +++ + +W ++ G PEL DPR+ A+ R + EL + + Sbjct 238 VGNYATKDGWLGVTVVTPAQWLGFCAMIGLPELGPDPRYSATADRFIHADELNSIIRPVL 297 Query 669 STRTPVQ 675 +T ++ Sbjct 298 MHKTALE 304 >gi|325673110|ref|ZP_08152804.1| L-carnitine dehydratase/bile acid-inducible protein F [Rhodococcus equi ATCC 33707] gi|325556363|gb|EGD26031.1| L-carnitine dehydratase/bile acid-inducible protein F [Rhodococcus equi ATCC 33707] Length=779 Score = 280 bits (716), Expect = 8e-73, Method: Compositional matrix adjust. Identities = 244/803 (31%), Positives = 350/803 (44%), Gaps = 80/803 (9%) Query 4 RLLADLGADVLKVEPPGGSPGRHVRPTLAGTSIGFAMHNANKRSAVLNPLDESDRRRFLD 63 R+L LG DV+ VEP G P RH G + G +A K+S V++ ++ R Sbjct 21 RILVGLGYDVVLVEPADGDPSRH---EFGGHAYGH--WHAGKKSVVIDLGSDAGRGDLAR 75 Query 64 LAASADIVVDCGLPGQAAAYGASCAELADRYRHLVALSITDFGAAGPRSSWRATDPVLYA 123 L A++D+ +D PG + AD H+ +T FG GPR +W ATD + A Sbjct 76 LVAASDVFLDGSAPG-----AEPVSVPADSTVHV---RVTPFGVDGPRRNWAATDLTVAA 127 Query 124 MSGALSRSGPTAGTPVLPPDGIASATAAVQAAWAVLVAYFNRLRCGTGDYIDFSRFDAVV 183 + G L++ G G P+L P G A A V AA L+ R R G ID S + V Sbjct 128 LGGMLAQVGDPDGPPLLLPQGQAEQLAGVNAAIGALLGLRAR-RLGPVPAIDVSAQECVA 186 Query 184 MALDPPFGAHGQVAAGIRSTGRWRGRPKNQDAYPIYPCRDGYVRFC--------VMAPRQ 235 +L+ A + R P+ +P+ P G R +PR Sbjct 187 ASLE---------AGTLAYLHEDRVPPRPGRVHPLVP--HGLFRAADGFLGGGLGGSPRM 235 Query 236 WRGLRRWL---GEPEDFQDPKYDVIGARLAAWPQISVLVAKLCAEKTMKELVAAGQALGV 292 W L WL G +D DP++ R + +V + + T +E A Q+ + Sbjct 236 WDALLAWLVEEGAADDLTDPRWGDPVERKRHQEHVFEVVQRFLDKWTKEEFAVAAQSRKL 295 Query 293 PITAVLTPSRILASEHFQAVGAITDAELVPGVRTGVPTGYFVVDGKRAGFRTPAPAAGQD 352 P +AV P +L + D GV + G+ +G RA R A + Sbjct 296 PWSAVDRPDELLVNPQLNDRDFFVDVVSPDGVTRDLGFGFAFPEGSRA--RDLVVAEPGE 353 Query 353 EPRWLAD--PAPVPPPSGRVGGYPFEGLRILDLGIIVAGGELSRLFGDLGAEVIKVESAD 410 L D P + P P +G+R+LDL ++AG +R+ D GA+V+KVES Sbjct 354 HQALLDDCRPPEIRSPELNSSTLPLDGIRVLDLTWVLAGPYCTRILADHGADVVKVESLG 413 Query 411 HPDGLRQTRVGDAMSES------------FAWTHRNHLALGLDLRNSEGKAIFGRLVAES 458 PD TR M S F +RN ++ LD R+ G + L+A+S Sbjct 414 RPD---PTRFAPFMHLSRGPHDDPDTSGYFNDVNRNKRSITLDTRSPAGLEVLADLIAQS 470 Query 459 DAVFANFKPGTLTSLGFSYDVLHAFNPRIVLAGSSAFGNRGPWSTRMGYGPLVRAATGVT 518 D V NF + +GF Y+ L P IV S G+ GP S + Y +V AATG+T Sbjct 471 DVVVENFSSTVMEKMGFGYERLRELRPDIVYVSMSGMGHTGPRSGWVSYADIVSAATGLT 530 Query 519 RV--WTSDEAQPDNSRHPFYDATTIFPDHVVGRVGALLALAALIHRDRTGGGAHVHISQA 576 + W+SD+ H D V G A LAAL HRDRTG G HV +SQ Sbjct 531 ALTGWSSDQVVGVIYGHG---------DIVAGLQAATAVLAALEHRDRTGRGQHVDLSQL 581 Query 577 EVVVNQLDTMFVAEAARA---TDVAEIHPDTSVHAVYPCAGDDEWCVISIRSDDEWRRAT 633 E + + + T V + HP S H V+ C G D WC I++R D +WR Sbjct 582 EAMASHMGTSVVQATGTGRFPVPIGNAHPTMSPHGVFRCLGPDRWCAIAVRDDADWRHLC 641 Query 634 SVFGQPELANDPRFGASRSRVANRSELVAAVSAWTSTRTPVQAAGALQAAGVAAGPMNRP 693 V G+P+ A+D RF + R + +E+ A++ WT+ A LQ+AGV AG + Sbjct 642 DVLGRPDWADDDRFRTAAGRREHGTEIADAIATWTAPLPAETVADRLQSAGVPAGVVQNG 701 Query 694 SDILE-DPQLIERNLFRDMVHPLIARPL----PAETGPAPFRHIPQAPQRPAPLPGQDSV 748 D++E DP L R + HP + R L P G A +R APL G D+ Sbjct 702 RDLVESDPHLRARGYYVPGDHPKVGRFLHEGAPVRVGAA------VTVRRAAPLLGADTD 755 Query 749 QICRKLLGMTADETERLINERVM 771 + R + G RL + V+ Sbjct 756 DVLRDVAGYPPATIARLRADGVL 778 Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 107/385 (28%), Positives = 161/385 (42%), Gaps = 36/385 (9%) Query 3 TRLLADLGADVLKVEPPGG------------SPGRHVRPTLAGTSIGFAMHNANKRSAVL 50 TR+LAD GADV+KVE G S G H P +G F N NKRS L Sbjct 396 TRILADHGADVVKVESLGRPDPTRFAPFMHLSRGPHDDPDTSGY---FNDVNRNKRSITL 452 Query 51 NPLDESDRRRFLDLAASADIVVDCGLPGQAAAYGASCAELADRYRHLVALSITDFGAAGP 110 + + DL A +D+VV+ G L + +V +S++ G GP Sbjct 453 DTRSPAGLEVLADLIAQSDVVVENFSSTVMEKMGFGYERLRELRPDIVYVSMSGMGHTGP 512 Query 111 RSSWRATDPVLYAMSGALSRSGPTAGTPVLPPDGIASATAAVQAAWAVLVAYFNRLRCGT 170 RS W + ++ A +G + +G ++ V G A +QAA AVL A +R R G Sbjct 513 RSGWVSYADIVSAATGLTALTGWSSDQVVGVIYGHGDIVAGLQAATAVLAALEHRDRTGR 572 Query 171 GDYIDFSRFDAVVMALDPPFGAHGQVAAGIRSTGRWRGRPKNQDAYP------IYPCRDG 224 G ++D S+ +A+ + + +++TG R +A+P ++ C G Sbjct 573 GQHVDLSQLEAMASHMG---------TSVVQATGTGRFPVPIGNAHPTMSPHGVFRCL-G 622 Query 225 YVRFCVMAPR---QWRGLRRWLGEPEDFQDPKYDVIGARLAAWPQISVLVAKLCAEKTMK 281 R+C +A R WR L LG P+ D ++ R +I+ +A A + Sbjct 623 PDRWCAIAVRDDADWRHLCDVLGRPDWADDDRFRTAAGRREHGTEIADAIATWTAPLPAE 682 Query 282 ELVAAGQALGVPITAVLTPSRILASE-HFQAVGAITDAELVPGVRTGVPTGYFVVDGKRA 340 + Q+ GVP V ++ S+ H +A G + P V + G V G Sbjct 683 TVADRLQSAGVPAGVVQNGRDLVESDPHLRARGYYVPGDH-PKVGRFLHEGAPVRVGAAV 741 Query 341 GFRTPAPAAGQDEPRWLADPAPVPP 365 R AP G D L D A PP Sbjct 742 TVRRAAPLLGADTDDVLRDVAGYPP 766 >gi|312141632|ref|YP_004008968.1| CoA-transferase family iii [Rhodococcus equi 103S] gi|311890971|emb|CBH50290.1| putative CoA-transferase family III [Rhodococcus equi 103S] Length=779 Score = 276 bits (707), Expect = 8e-72, Method: Compositional matrix adjust. Identities = 242/802 (31%), Positives = 347/802 (44%), Gaps = 78/802 (9%) Query 4 RLLADLGADVLKVEPPGGSPGRHVRPTLAGTSIGFAMHNANKRSAVLNPLDESDRRRFLD 63 R+L LG DV+ VEP G P RH G + G +A K+S V++ ++ R Sbjct 21 RILVGLGYDVVLVEPADGDPSRH---EFCGHAYGH--WHAGKKSVVIDLGSDTGRGDLAR 75 Query 64 LAASADIVVDCGLPGQAAAYGASCAELADRYRHLVALSITDFGAAGPRSSWRATDPVLYA 123 L A++D+ +D PG + AD H+ +T FG GPR +W ATD + A Sbjct 76 LVAASDVFLDGSAPG-----AEPVSVPADSTVHV---RVTPFGVDGPRRNWAATDLTVAA 127 Query 124 MSGALSRSGPTAGTPVLPPDGIASATAAVQAAWAVLVAYFNRLRCGTGDYIDFSRFDAVV 183 + G L++ G G P+L P G A A V AA L+ R R G ID S + V Sbjct 128 LGGMLAQVGDPDGPPLLLPQGQAEQLAGVNAAIGALLGLRAR-RLGPVPAIDVSAQECVA 186 Query 184 MALDPPFGAHGQVAAGIRSTGRWRGRPKNQDAYPIYPCRDGYVRFC--------VMAPRQ 235 +L+ A + R P+ +P+ P G R +PR Sbjct 187 ASLE---------AGTLAYLHEDRVPPRPGRVHPLVP--HGLFRAADGFLGGGLGGSPRM 235 Query 236 WRGLRRWL---GEPEDFQDPKYDVIGARLAAWPQISVLVAKLCAEKTMKELVAAGQALGV 292 W L WL G +D DP++ R + +V + + T +E A Q+ + Sbjct 236 WDALLAWLVEEGAADDLTDPRWGDPVERKRHQEHVFEVVQRFLDKWTKEEFAVAAQSRKL 295 Query 293 PITAVLTPSRILASEHFQAVGAITDAELVPGVRTGVPTGYFVVDGKRA-GFRTPAPAAGQ 351 P +AV P +L + D GV + G+ +G RA P Q Sbjct 296 PWSAVDRPDELLVNPQLNDRDFFVDVVSPDGVTRDLGFGFAFPEGARARDLVVAQPGEHQ 355 Query 352 DEPRWLADPAPVPPPSGRVGGYPFEGLRILDLGIIVAGGELSRLFGDLGAEVIKVESADH 411 DP + P P +G+R+LDL ++AG +R+ D GA+V+KVES Sbjct 356 ALLDDCRDPE-IRSPEPNSSTLPLDGIRVLDLTWVLAGPYCTRILADHGADVVKVESLGR 414 Query 412 PDGLRQTRVGDAMSES------------FAWTHRNHLALGLDLRNSEGKAIFGRLVAESD 459 PD TR M S F +RN ++ LD R+ G + L+A+SD Sbjct 415 PD---PTRFAPFMHLSRGPHDDPDTSGYFNDVNRNKRSITLDTRSPAGLEVLADLIAQSD 471 Query 460 AVFANFKPGTLTSLGFSYDVLHAFNPRIVLAGSSAFGNRGPWSTRMGYGPLVRAATGVTR 519 V NF + +GF Y+ L P IV S G+ GP S + Y +V AATG+T Sbjct 472 VVVENFSSTVMEKMGFGYERLRELRPDIVYVSMSGMGHTGPRSGWVSYADIVSAATGLTA 531 Query 520 V--WTSDEAQPDNSRHPFYDATTIFPDHVVGRVGALLALAALIHRDRTGGGAHVHISQAE 577 + W+SD+ H D V G A LAAL HRDRTG G HV +SQ E Sbjct 532 LTGWSSDQVVGVIYGHG---------DIVAGLQAATAVLAALEHRDRTGRGQHVDLSQLE 582 Query 578 VVVNQLDTMFVAEAARA---TDVAEIHPDTSVHAVYPCAGDDEWCVISIRSDDEWRRATS 634 + + + T V + HP S H V+ C G D WC I++R D +WR Sbjct 583 AMASHMGTSVVQATGTGRFPVPIGNAHPTMSPHGVFRCLGPDRWCAIAVRDDADWRHLCD 642 Query 635 VFGQPELANDPRFGASRSRVANRSELVAAVSAWTSTRTPVQAAGALQAAGVAAGPMNRPS 694 V G+P+ A+D R + R + +E+ A++ WT+ A LQ+AGV AG + Sbjct 643 VLGRPDWADDDRLRTAAGRREHGTEIADAIATWTAPLPAETVADRLQSAGVPAGVVQNGR 702 Query 695 DILE-DPQLIERNLFRDMVHPLIARPL----PAETGPAPFRHIPQAPQRPAPLPGQDSVQ 749 D++E DP L R + HP + R L P G A +R APL G D+ Sbjct 703 DLVESDPHLRARGYYVPGDHPKVGRFLHEGAPVRVGAA------VTVRRAAPLLGADTDD 756 Query 750 ICRKLLGMTADETERLINERVM 771 + R + G RL + V+ Sbjct 757 VLRDVAGYPPATIARLRADGVL 778 Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 107/385 (28%), Positives = 160/385 (42%), Gaps = 36/385 (9%) Query 3 TRLLADLGADVLKVEPPGG------------SPGRHVRPTLAGTSIGFAMHNANKRSAVL 50 TR+LAD GADV+KVE G S G H P +G F N NKRS L Sbjct 396 TRILADHGADVVKVESLGRPDPTRFAPFMHLSRGPHDDPDTSGY---FNDVNRNKRSITL 452 Query 51 NPLDESDRRRFLDLAASADIVVDCGLPGQAAAYGASCAELADRYRHLVALSITDFGAAGP 110 + + DL A +D+VV+ G L + +V +S++ G GP Sbjct 453 DTRSPAGLEVLADLIAQSDVVVENFSSTVMEKMGFGYERLRELRPDIVYVSMSGMGHTGP 512 Query 111 RSSWRATDPVLYAMSGALSRSGPTAGTPVLPPDGIASATAAVQAAWAVLVAYFNRLRCGT 170 RS W + ++ A +G + +G ++ V G A +QAA AVL A +R R G Sbjct 513 RSGWVSYADIVSAATGLTALTGWSSDQVVGVIYGHGDIVAGLQAATAVLAALEHRDRTGR 572 Query 171 GDYIDFSRFDAVVMALDPPFGAHGQVAAGIRSTGRWRGRPKNQDAYP------IYPCRDG 224 G ++D S+ +A+ + + +++TG R +A+P ++ C G Sbjct 573 GQHVDLSQLEAMASHMG---------TSVVQATGTGRFPVPIGNAHPTMSPHGVFRCL-G 622 Query 225 YVRFCVMAPR---QWRGLRRWLGEPEDFQDPKYDVIGARLAAWPQISVLVAKLCAEKTMK 281 R+C +A R WR L LG P+ D + R +I+ +A A + Sbjct 623 PDRWCAIAVRDDADWRHLCDVLGRPDWADDDRLRTAAGRREHGTEIADAIATWTAPLPAE 682 Query 282 ELVAAGQALGVPITAVLTPSRILASE-HFQAVGAITDAELVPGVRTGVPTGYFVVDGKRA 340 + Q+ GVP V ++ S+ H +A G + P V + G V G Sbjct 683 TVADRLQSAGVPAGVVQNGRDLVESDPHLRARGYYVPGDH-PKVGRFLHEGAPVRVGAAV 741 Query 341 GFRTPAPAAGQDEPRWLADPAPVPP 365 R AP G D L D A PP Sbjct 742 TVRRAAPLLGADTDDVLRDVAGYPP 766 >gi|86748700|ref|YP_485196.1| L-carnitine dehydratase/bile acid-inducible protein F [Rhodopseudomonas palustris HaA2] gi|86571728|gb|ABD06285.1| L-carnitine dehydratase/bile acid-inducible protein F [Rhodopseudomonas palustris HaA2] Length=814 Score = 273 bits (699), Expect = 7e-71, Method: Compositional matrix adjust. Identities = 237/809 (30%), Positives = 364/809 (45%), Gaps = 64/809 (7%) Query 4 RLLADLGADVLKVEPPGGSPGRHVRPTL----AGTSIGFAMHNANKRSAVLNPLDESDRR 59 +L AD GA+V+KVEPPGG P R V P + S FA N+NKRS D + Sbjct 25 KLFADFGAEVVKVEPPGGDPDRQVAPRVERGGGRESASFAWLNSNKRSVTAKLDDPAGVV 84 Query 60 RFLDLAASADIVVDCGLPGQAAAYGASCAELADRYRHLVALSITDFGAAGPRSSWRATDP 119 R L A AD+++D P + A S L + L +++ FG GP + ATD Sbjct 85 RIERLLADADLLLDARHPVEIEASTLSHRRLRETQPGLAITALSWFGEHGPYRDYLATDA 144 Query 120 VLYAMSGALSRSGPTAGTPVLPPDGIASATAAVQAAWAVLVAYFNRLRCGTGDY------ 173 V +++G + GP G PVLP DG + A + A L F R G + Sbjct 145 VCRSLAGLVKLVGPAEGPPVLPRDGQTAVIAGLTAFIPTLAGLFARADQGARRFAVNAFE 204 Query 174 --IDFSRFDAVVMALDPPFGAHGQVAAGIRSTGRWRGRPKNQDAYPI--YPCRDGYVRFC 229 + + FD + +AL+ + G+ GR +P+ Y +DG++ Sbjct 205 ATLQIAEFD-IALALE---AGSTRPRIGLNRFGR---------GFPVGNYATKDGWLGVT 251 Query 230 VMAPRQWRGLRRWLGEPEDFQDPKYDVIGARLAAWPQISVLVAKLCAEKTMKELVAAGQA 289 V+ P QW G +G PE DP+Y R +++ ++ + +T + G A Sbjct 252 VVTPAQWLGFCAMIGLPELGPDPRYSATNDRFIHADELNSIIRPVLMHRTAMDWFERGLA 311 Query 290 LGVPITAVLTPSRILASEHFQAVGAITDAELVPGVRTG--VPTGYFVVDGKRAGFRTPAP 347 L +P+ V +++LA + GA E+ +P GK G AP Sbjct 312 LRLPLALVPDMAQLLAQPVMRERGAFATVEIGTASFEAPVLPQRLTASPGKPNGR---AP 368 Query 348 AAGQDE------PRWLADPAPVPPPSGRVGGYPFEGLRILDLGIIVAGGELSRLFGDLGA 401 G+ + R +AD A +G P G+RI+DL + AG R GDLGA Sbjct 369 LCGEHDGVELSPHRRIADRA-----AGASEALPLSGIRIVDLTMGWAGPSAVRQLGDLGA 423 Query 402 EVIKVESADHPDGLRQT-----RVGDAMSESFAW---THRNHLALGLDLRNSEGKAIFGR 453 +++KVES +PD R T + E W +RN + LDL ++G+A + Sbjct 424 DIVKVESCQYPDWFRGTDPRGPYHPERTYEKTYWFQTMNRNKRGITLDLTTADGRAALTK 483 Query 454 LVAESDAVFANFKPGTLTSLGFSYDVLHAFNPRIVLAGSSAFGNRGPWSTRMGYGPLVRA 513 L+A +DAV N+ L LG + A NPR+V+ AFG G WS YG + Sbjct 484 LLAGADAVIDNYAADVLPRLGLDVAAMQAINPRLVIVTMPAFGLTGRWSAARAYGSTLEQ 543 Query 514 ATGVTRVWTSDEAQPDNSRHPFYDATTIFPDHVVGRVGALLALAALIHRDRTGGGAHVHI 573 A+G+ V T + P +H D V G A + L ++ RTG G H+ + Sbjct 544 ASGLPSV-TGRDGDPPTMQH------AALGDPVGGLNAAAALMLGLTYQQRTGDGQHIDL 596 Query 574 SQAEVVVNQLDTMFVAEAARATD---VAEIHPDTSVHAVYPCAGDDEWCVISIRSDDEWR 630 SQ E ++ L + + ++ + HP +PCAG+D+W + ++SD +W Sbjct 597 SQVECMLPMLASSIIEQSVTGHTGPRLGNRHPRFVPSGCFPCAGEDQWVTLVVQSDAQWA 656 Query 631 RATSVFGQPELANDPRFGASRSRVANRSELVAAVSAWTSTRTPVQAAGALQAAGVAAGPM 690 V +P+LA+DP + R A+ + AV WTST P A LQ A +AAG Sbjct 657 ALCRVMHRPDLAHDPALATADGRRADEDRIEVAVRHWTSTVRPELAMVTLQEAAIAAGVA 716 Query 691 NRPSDILEDPQLIERNLFRDMVHPLIA-RPLPAETGPAPFRHIPQAPQRPAPLPGQDSVQ 749 P D++ D L+ ++ +V P + LP+ + F P +R AP GQ + + Sbjct 717 RLPVDLVGDAHLLATGHWQPVVRPFMGPHLLPSVSYREGFAERPYPIERLAPTLGQHNHE 776 Query 750 ICRKLLGMTADETERLINERVMFGPAVTA 778 + R+ +G+T E L ++R + G TA Sbjct 777 VLRE-IGLTEAEIGDL-HDRGVIGRVATA 803 Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 93/377 (25%), Positives = 148/377 (40%), Gaps = 24/377 (6%) Query 374 PFEGLRILDLGIIVAGGELSRLFGDLGAEVIKVE----SADHPDGLRQTRVGDAMSESFA 429 P LR+++LG A +LF D GAEV+KVE D R R G S SFA Sbjct 5 PLSELRVVELGSGDALAYCGKLFADFGAEVVKVEPPGGDPDRQVAPRVERGGGRESASFA 64 Query 430 WTHRNHLALGLDLRNSEGKAIFGRLVAESDAVFANFKPGTLTSLGFSYDVLHAFNPRIVL 489 W + N ++ L + G RL+A++D + P + + S+ L P + + Sbjct 65 WLNSNKRSVTAKLDDPAGVVRIERLLADADLLLDARHPVEIEASTLSHRRLRETQPGLAI 124 Query 490 AGSSAFGNRGPWSTRMGYGPLVRAATGVTRVWTSDEAQPDNSRHPFYDATTIFPDHVVGR 549 S FG GP+ + + R+ G+ ++ E P R D T + G Sbjct 125 TALSWFGEHGPYRDYLATDAVCRSLAGLVKLVGPAEGPPVLPR----DGQTAV---IAGL 177 Query 550 VGALLALAALIHR-DRTGGGAHVHISQAEVVVNQLDTMFVAEAARATDVAEIHPDTSVHA 608 + LA L R D+ V+ +A + + + D EA ++ Sbjct 178 TAFIPTLAGLFARADQGARRFAVNAFEATLQIAEFDIALALEAGSTRPRIGLNRFGRGFP 237 Query 609 VYPCAGDDEWCVISIRSDDEWRRATSVFGQPELANDPRFGASRSRVANRSELVAAVSAWT 668 V A D W +++ + +W ++ G PEL DPR+ A+ R + EL + + Sbjct 238 VGNYATKDGWLGVTVVTPAQWLGFCAMIGLPELGPDPRYSATNDRFIHADELNSIIRPVL 297 Query 669 STRTPVQAAGALQAAGVAAGPMNRPSDILEDPQLIERNLFRDMVHPLIARPLPAETGPAP 728 RT + A + + + +L P + ER F + E G A Sbjct 298 MHRTAMDWFERGLALRLPLALVPDMAQLLAQPVMRERGAFATV-----------EIGTAS 346 Query 729 FRHIPQAPQRPAPLPGQ 745 F P PQR PG+ Sbjct 347 F-EAPVLPQRLTASPGK 362 >gi|240171018|ref|ZP_04749677.1| acyl-CoA transferase [Mycobacterium kansasii ATCC 12478] Length=799 Score = 256 bits (653), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 224/787 (29%), Positives = 343/787 (44%), Gaps = 56/787 (7%) Query 2 VTRLLADLGADVLKVEPPGGSPGRHVRPTLAGTSIG------FAMHNANKRSAVLNPLDE 55 ++LL D GA V K+EPP G P R P+ + G + NA K+S L P + Sbjct 33 CSKLLVDAGARVRKIEPPQGDPLRRYSPSCSPVPDGLPASPLYCYLNAGKQSLTLAP--D 90 Query 56 SDRRRFLDLAASADIVVDCGLPGQAAAYGASCAELADRYRHLVALSITDFGAAGPRSSWR 115 S+R R +LAA+ ++V CG QAAA G L + ++I+DFG GP + Sbjct 91 SERYR-AELAAADVVIVTCGR-SQAAALGIDPRRLLAESPRAIVVTISDFGWTGPFADRA 148 Query 116 ATDPVLYAMSGALSRSGPTAGTPVLPPDGIASATAAVQAAWAVLVAYFNRLRCGTGDYID 175 AT+ L A +G+ G AG P+ G+ V AA+ L G G+++D Sbjct 149 ATEFTLQAWAGSPGFRGDPAGPPLSIGGGLGEYMGGVFAAFGALAVRRRVEHGGPGEHLD 208 Query 176 FSRFDAVVMALDPPFGAHGQV--AAGIRSTGRWRGRPKNQDAYPIYPCRDGYVRFCVMAP 233 S +A+ + + H Q+ +R T + I P +DGYV ++ Sbjct 209 LSMLEAMSLMQSSEW-LHSQLLRVPPVRRT---------LEVPSIEPAKDGYVGITMVTG 258 Query 234 RQWRGLRRWLGEPEDFQDPKYDVIGARLAAWPQISVLVAKLCAEKTMKELVAAGQALGVP 293 +QW + P+ + P+ R I + AE+T++E+VA GQ +P Sbjct 259 QQWLDFTAMVECPQLEEIPQLRFQIGRWEYRDLIRESIRPWMAERTVEEIVALGQLFRLP 318 Query 294 ITAVLTPSRILASEHFQAVGAITDAELVPGVRTGVPTGYFVVDGKRAGFRTPAPAAGQDE 353 I A+ + I E+ G D G P RT A DE Sbjct 319 IAALGNGATIRDMEYVTERGVFVDNPA--GFHQPRPPWLMSRCATAPVCRTAELGADNDE 376 Query 354 PRWLA-----DPAPVPPPSGRVGGYPFEGLRILDLGIIVAGGELSRLFGDLGAEVIKVES 408 W A DP PV G P +G+R++DL AG + L GA+V+KVES Sbjct 377 SPWCAGESASDPVPV--------GLPLDGVRVIDLTAFWAGPAATHLLAAFGADVVKVES 428 Query 409 ADHPDGLR-----QTRVGDAMSESFAW--THRNHLALGLDLRNSEGKAIFGRLVAESDAV 461 PDG+R +T V D + + + N ++ LDL + +G+ +F L A++D V Sbjct 429 IQRPDGIRYSGGMRTDVDDWWEYGWVFHAMNTNKRSITLDLGSEDGRRLFLALAADADVV 488 Query 462 FANFKPGTLTSLGFSYDVLHAFNPRIVLAGSSAFGNRGPWSTRMGYGPLVRAATGVTRVW 521 NF P + G + +VL NPR+V+A AFG GPW R+G+ P + G+T V Sbjct 489 IENFSPRVMEHFGLTAEVLLKANPRLVVARMPAFGLTGPWRDRVGFAPTMEQIGGLTWVT 548 Query 522 TSDEAQPDNSRHPFYDATTIFPDHVVGRVGALLALAALIHRDRTGGGAHVHISQAEVVVN 581 E P R D + G A LAAL +R+G G V + E V+N Sbjct 549 GLPEEPPVTPRGAC--------DPLAGVHAAFAVLAALNFAERSGVGQQVELPMVESVLN 600 Query 582 QLDTMFVAEAARATDVAEIHP---DTSVHAVYPCAGDDEWCVISIRSDDEWRRATSVFGQ 638 + + ++ +Y CAGDD+W +SIR D +W + + Sbjct 601 TTAIQPIEHEVYGVTLNRCGNRGFGGALQNIYRCAGDDDWIAVSIRDDQDWNALAELMER 660 Query 639 PELANDPRFGASRSRVANRSELVAAVSAWTSTRTPVQAAGALQAAGVAAGPMNRPSDILE 698 P D + R E+ + W + ++ + +L A+G+ A P+ PS + E Sbjct 661 PSWC-DESLSTTALRRERADEIDGRLRDWFAAQSLMPTVESLAASGIPAAPVVSPSLVTE 719 Query 699 DPQLIERNLFRDMVHPLIARPLPAETGPAPFRHIPQAPQRPAPLPGQDSVQICRKLLGMT 758 +PQL +R F +VH I + L A + +RP P G+ + +I R+ G+T Sbjct 720 NPQLCDRGYFEPLVHCRIGQALYPTPPFARLAGQREWLRRPPPTLGEHNEEILRERCGLT 779 Query 759 ADETERL 765 +E RL Sbjct 780 DEELARL 786 Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust. Identities = 74/343 (22%), Positives = 134/343 (40%), Gaps = 21/343 (6%) Query 374 PFEGLRILDLGIIVAGGELSRLFGDLGAEVIKVESADHPDGLRQ-----TRVGDAMSESF 428 P + LR++++ +AG S+L D GA V K+E D LR+ + V D + S Sbjct 15 PLDELRVVEISDRIAGSYCSKLLVDAGARVRKIEPPQG-DPLRRYSPSCSPVPDGLPASP 73 Query 429 AWTHRNHLALGLDLRNSEGKAIFGRLVAESDAVFANFKPGTLTSLGFSYDVLHAFNPRIV 488 + + N L L + + +A +D V +LG L A +PR + Sbjct 74 LYCYLNAGKQSLTLAPDSER--YRAELAAADVVIVTCGRSQAAALGIDPRRLLAESPRAI 131 Query 489 LAGSSAFGNRGPWSTRMGYGPLVRAATGVT-RVWTSDEAQPDNSRHPFYDATTIFPDHVV 547 + S FG GP++ RAAT T + W + P +++ Sbjct 132 VVTISDFGWTGPFAD--------RAATEFTLQAWAGSPGFRGDPAGPPLSIGGGLGEYMG 183 Query 548 GRVGALLALAALIHRDRTGGGAHVHISQAEVVVNQLDTMFVAEAARATDVAEIHPDTSVH 607 G A ALA + G G H+ +S E + + ++ ++ V + V Sbjct 184 GVFAAFGALAVRRRVEHGGPGEHLDLSMLEAMSLMQSSEWL--HSQLLRVPPVRRTLEVP 241 Query 608 AVYPCAGDDEWCVISIRSDDEWRRATSVFGQPELANDPRFGASRSRVANRSELVAAVSAW 667 ++ P D + I++ + +W T++ P+L P+ R R + ++ W Sbjct 242 SIEP--AKDGYVGITMVTGQQWLDFTAMVECPQLEEIPQLRFQIGRWEYRDLIRESIRPW 299 Query 668 TSTRTPVQAAGALQAAGVAAGPMNRPSDILEDPQLIERNLFRD 710 + RT + Q + + + I + + ER +F D Sbjct 300 MAERTVEEIVALGQLFRLPIAALGNGATIRDMEYVTERGVFVD 342 >gi|338975454|ref|ZP_08630806.1| hypothetical protein CSIRO_3916 [Bradyrhizobiaceae bacterium SG-6C] gi|338231385|gb|EGP06523.1| hypothetical protein CSIRO_3916 [Bradyrhizobiaceae bacterium SG-6C] Length=821 Score = 250 bits (638), Expect = 7e-64, Method: Compositional matrix adjust. Identities = 231/800 (29%), Positives = 345/800 (44%), Gaps = 58/800 (7%) Query 4 RLLADLGADVLKVEPPGGSPGRHVRPTLAGT------SIGFAMHNANKRSAVLNPLDESD 57 +L D GA+V+K+EP GG PGR + P LA S+ FA N NK+S + +P Sbjct 25 KLFVDFGAEVIKIEPQGGDPGRRI-PPLADVGGGQRESLTFAWLNTNKKSIIADPETADG 83 Query 58 RRRFLDLAASADIVVDCGLPGQAAAYGASCAELADRYRHLVALSITDFGAAGPRSSWRAT 117 R L+L A+AD+++D P A S L L +I+ FG GP ++ AT Sbjct 84 ASRILELLATADLLLDARHPDGIKASQISHDRLRKADPGLAITAISWFGEHGPYRNYLAT 143 Query 118 DPVLYAMSGALSRSGPTAGTPVLPPDG---IASATAAVQAAWAVLVAYFNRLRCGTGDYI 174 D V +++G + GP G PVLP DG + A + A L Y + R + + Sbjct 144 DSVCRSLAGLVKLVGPVEGPPVLPRDGQIGVVGGLTAFIPSLAGLYGYEHGARRFAVNNL 203 Query 175 D----FSRFDAVVMALDPPFGAHGQVAAGIRSTGRWRGRPKNQDAYPIYPCRDGYVRFCV 230 + S FD +AL+ F + GI GR G P + + G++ V Sbjct 204 EAMLHISEFD-TGLALESGFT---RPRPGINRFGR--GYPSGN-----FQTKHGWLGVTV 252 Query 231 MAPRQWRGLRRWLGEPEDFQDPKYDVIGARLAAWPQISVLVAKLCAEKTMKELVAAGQAL 290 + P QW L PE DPKY R ++ ++ +KT E G L Sbjct 253 VTPAQWAAFCTMLDMPELGADPKYSATIGRFNHADELKAIITPALLKKTALEWFEMGIDL 312 Query 291 GVPITAVLTPSRILASEHFQAVGAITDAELVPGVRTG-VPTGYFVVDGKRAGFRTPAPAA 349 +P+ V +L + +A GA E+ G V Y R R AP A Sbjct 313 RLPLAVVPDMKELLEQDVHRARGAFGTVEIGNASFEGPVLPQYLTRSRPRPNGR--APLA 370 Query 350 GQDEPRWL------ADPAPVPPPSGRVGGYPFEGLRILDLGIIVAGGELSRLFGDLGAEV 403 G D+ L A A P P +GLRI+DL + AG +R GDLGA++ Sbjct 371 GSDDKAALPAHKRKATRAATPQDE-----LPLKGLRIVDLTMGWAGPTATRQMGDLGADI 425 Query 404 IKVESADHPDGLRQTRVGDAMSES--------FAWTHRNHLALGLDLRNSEGKAIFGRLV 455 IKVES +PD R T E F +RN + LDL G ++ RL+ Sbjct 426 IKVESCQYPDWFRGTDTRPPYHEERTYEKTYWFQMNNRNKRGITLDLTTEAGLSLLKRLM 485 Query 456 AESDAVFANFKPGTLTSLGFSYDVLHAFNPRIVLAGSSAFGNRGPWSTRMGYGPLVRAAT 515 ++DAV N+ + LG D + NPR+++ AFG G WS YG + A+ Sbjct 486 KDADAVIDNYAADVMPRLGLGVDDILKINPRLIVVTMPAFGMTGKWSGVRAYGSTLEQAS 545 Query 516 GVTRVWTSDEAQPDNSRHPFYDATTIFPDHVVGRVGALLALAALIHRDRTGGGAHVHISQ 575 G+ V PD+ + A D + G A L + + TG G H+ +SQ Sbjct 546 GLPSV----TGGPDDPPVMLHAAIG---DPIGGLNAAAALLLGFMQQRNTGEGQHIDLSQ 598 Query 576 AEVVVNQLDTMFVAEAARATD---VAEIHPDTSVHAVYPCAGDDEWCVISIRSDDEWRRA 632 E ++ + + ++A HP + +P G D+W +S+RS+DEW+ Sbjct 599 VECMLPMVAPSILEQSATGATSPRTGNRHPQYVPNGCFPTLGIDQWLTLSVRSNDEWKAL 658 Query 633 TSVFGQPELANDPRFGASRSRVANRSELVAAVSAWTSTRTPVQAAGALQAAGVAAGPMNR 692 +P+LANDP + R + + A+ W + P A LQ AGV AG Sbjct 659 CGAMRRPDLANDPALATAEGRREHEDSIEVAIRHWLADVRPDIAMVTLQKAGVPAGIAKL 718 Query 693 PSDILEDPQLIERNLFRDMVHPLIA-RPLPAETGPAPFRHIPQAPQRPAPLPGQDSVQIC 751 P D+ DP L++ ++ P + LP+ +P A AP GQ + ++ Sbjct 719 PQDLASDPHLLKTGHWQPSDRPFMGPHLLPSVAYREGDSELPYAITHLAPTLGQHNHEVL 778 Query 752 RKLLGMTADETERLINERVM 771 R++LG++ E L V+ Sbjct 779 REVLGLSDAEIAELERNEVI 798 Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 74/311 (24%), Positives = 128/311 (42%), Gaps = 20/311 (6%) Query 374 PFEGLRILDLGIIVAGGELSRLFGDLGAEVIKVESADHPDGLR---QTRVGDAMSES--F 428 P LR+++LG G +LF D GAEVIK+E G R VG ES F Sbjct 5 PLSSLRVVELGSGDTLGYCGKLFVDFGAEVIKIEPQGGDPGRRIPPLADVGGGQRESLTF 64 Query 429 AWTHRNHLALGLDLRNSEGKAIFGRLVAESDAVFANFKPGTLTSLGFSYDVLHAFNPRIV 488 AW + N ++ D ++G + L+A +D + P + + S+D L +P + Sbjct 65 AWLNTNKKSIIADPETADGASRILELLATADLLLDARHPDGIKASQISHDRLRKADPGLA 124 Query 489 LAGSSAFGNRGPWSTRMGYGPLVRAATGVTRVWTSDEAQPDNSRHPFYDATTIFPDHVVG 548 + S FG GP+ + + R+ G+ ++ E P R D +G Sbjct 125 ITAISWFGEHGPYRNYLATDSVCRSLAGLVKLVGPVEGPPVLPR-----------DGQIG 173 Query 549 RVGALLA----LAALIHRDRTGGGAHVHISQAEVVVNQLDTMFVAEAARATDVAEIHPDT 604 VG L A LA L + V+ +A + +++ DT E+ I+ Sbjct 174 VVGGLTAFIPSLAGLYGYEHGARRFAVNNLEAMLHISEFDTGLALESGFTRPRPGINRFG 233 Query 605 SVHAVYPCAGDDEWCVISIRSDDEWRRATSVFGQPELANDPRFGASRSRVANRSELVAAV 664 + W +++ + +W ++ PEL DP++ A+ R + EL A + Sbjct 234 RGYPSGNFQTKHGWLGVTVVTPAQWAAFCTMLDMPELGADPKYSATIGRFNHADELKAII 293 Query 665 SAWTSTRTPVQ 675 + +T ++ Sbjct 294 TPALLKKTALE 304 Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 75/319 (24%), Positives = 116/319 (37%), Gaps = 9/319 (2%) Query 3 TRLLADLGADVLKVEP---PGGSPGRHVRPTLA-----GTSIGFAMHNANKRSAVLNPLD 54 TR + DLGAD++KVE P G RP + F M+N NKR L+ Sbjct 415 TRQMGDLGADIIKVESCQYPDWFRGTDTRPPYHEERTYEKTYWFQMNNRNKRGITLDLTT 474 Query 55 ESDRRRFLDLAASADIVVDCGLPGQAAAYGASCAELADRYRHLVALSITDFGAAGPRSSW 114 E+ L AD V+D G ++ L+ +++ FG G S Sbjct 475 EAGLSLLKRLMKDADAVIDNYAADVMPRLGLGVDDILKINPRLIVVTMPAFGMTGKWSGV 534 Query 115 RATDPVLYAMSGALSRSGPTAGTPVLPPDGIASATAAVQAAWAVLVAYFNRLRCGTGDYI 174 RA L SG S +G PV+ I + AA A+L+ + + G G +I Sbjct 535 RAYGSTLEQASGLPSVTGGPDDPPVMLHAAIGDPIGGLNAAAALLLGFMQQRNTGEGQHI 594 Query 175 DFSRFDAVVMALDPPFGAHGQVAAGIRSTGRWRGRPKNQDAYPIYPCRDGYVRFCVMAPR 234 D S+ + ++ + P A TG + +P D ++ V + Sbjct 595 DLSQVECMLPMVAPSILEQSATGATSPRTGNRHPQYVPNGCFPTLGI-DQWLTLSVRSND 653 Query 235 QWRGLRRWLGEPEDFQDPKYDVIGARLAAWPQISVLVAKLCAEKTMKELVAAGQALGVPI 294 +W+ L + P+ DP R I V + A+ + Q GVP Sbjct 654 EWKALCGAMRRPDLANDPALATAEGRREHEDSIEVAIRHWLADVRPDIAMVTLQKAGVPA 713 Query 295 TAVLTPSRILASEHFQAVG 313 P + + H G Sbjct 714 GIAKLPQDLASDPHLLKTG 732 >gi|312196315|ref|YP_004016376.1| L-carnitine dehydratase/bile acid-inducible protein F [Frankia sp. EuI1c] gi|311227651|gb|ADP80506.1| L-carnitine dehydratase/bile acid-inducible protein F [Frankia sp. EuI1c] Length=834 Score = 249 bits (636), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 255/815 (32%), Positives = 352/815 (44%), Gaps = 80/815 (9%) Query 4 RLLADLGADVLKVEPPG-GSPGRHVRPT---LAGTSIGFAMHNANKRSAVLNPLDESDRR 59 +L AD GADV+KVEPPG G P R + L G F NA+KRS P D Sbjct 34 KLFADAGADVVKVEPPGAGDPLRAWSASGAPLDGDGALFRYLNASKRSVAAEP----DSP 89 Query 60 RFLDLAASADIVVDCGL--PGQAAAYGASCAEL----ADRYRHLVALSITDFGAAGPRSS 113 R LAA+AD+V+ G G A +G A + AD R +V +SI+ FG AGP + Sbjct 90 RVRGLAAAADVVITGGALAGGNHAGHGLDAAAVRRLHADNPRAVV-VSISPFGLAGPWTG 148 Query 114 WRA------------TDPVLYAMSGALSRSGPTAGTPVLPPDGIASATAAVQAAWAVLVA 161 A + +L A+ G+ + G P+ I A V AA L A Sbjct 149 AGAAHGSQPPRDRAVNEFLLQALCGSTAARGEPDAAPLQAGGRIGEWAAGVYAAVVGLAA 208 Query 162 YFNRLRCGTGDYIDFSRFDAVVMALDPPFGAHGQVAAGIRSTGRWRGRPKNQDAYPIYPC 221 R G GD +D S + + + + G G G + + I P Sbjct 209 LRGARRDGVGDLVDLSILECMTIMMGG-LSVVGPTIMGGPGPGVSGSPGRVPEIPSIVPT 267 Query 222 RDGYVRFCVMAPRQWRGLRRWLGEPEDFQDPKYDVIGARLAAWPQISVLVAKLCAEKTMK 281 +DG V FC + +Q++ + P+ D ++ R A + V T Sbjct 268 KDGLVGFCTITAQQFQDFLVLIERPDLLGDRDLALLARRHARRDEFLAAVHSWSTRHTTD 327 Query 282 ELVAAGQALGVPITAVLTPSRILASEHFQAVGAITDAELVPGVRTGV--PTGYFVVDGKR 339 E+V L +P+T V TPS + +HF A G VP G P + VDG R Sbjct 328 EIVELAAGLRIPVTPVGTPSTVTTIDHFTARGV-----FVPNPSGGFAQPRTPYRVDGFR 382 Query 340 AGFRTPAPAAGQDEPRWLADPAPVPPPSGRVG-GYPFEGLRILDLGIIVAGGELSRLFGD 398 APA G+ +P P P +G P +GLR+LDL AG + L G Sbjct 383 GRPLVGAPALGEHTDTVAWEPGPAPVQAGAAARELPLDGLRVLDLTAFWAGPSATMLLGS 442 Query 399 LGAEVIKVESADHPDGLRQTRVGDAMSESFAW--------THRNHLALGLDLRNSEGKAI 450 LGA+VIKVE PDGLR G +E W T+ N A+ L+L EG+ + Sbjct 443 LGADVIKVEGVTRPDGLRFAG-GKPPTEPSWWEWGTMFLATNANKRAVSLELSTREGQDL 501 Query 451 FGRLVAESDAVFANFKPGTLTSLGFSYDVLHAFNPRIVLAGSSAFGNRGPWSTRMGYGPL 510 RL+ D V NF P L +LG D + A NP VL AFG GPW R G+ Sbjct 502 AQRLIGACDVVIENFTPRVLPNLGLDRDAVRAANPATVLTRMPAFGLDGPWRDRTGFAQT 561 Query 511 VRAATGVTRVWTSDEAQPDNSRHPFYDATTIFPDHVVGRVGALLALAALIHRDRTGG--- 567 + A+G+ + + + P R D + G A L AL RDR GG Sbjct 562 MEQASGLAWLTGTRDGPPVIPRGAC--------DPIAGLHAAFATLVALTARDRPGGGGV 613 Query 568 GAHVHISQAEVVVNQLDTMFVAEAARATDVAEIH----------PDTSVHAVYPCAGDDE 617 GA V + E V+N + V +A A +H P + H AG D Sbjct 614 GAFVEATMVESVLNVAAELTVEHSAYG---ASLHRDGNRGPLAAPQGTYHCSRDPAGPDV 670 Query 618 WCVISIRSDDEWRRATSVFGQPELANDPRFGASRSRVANRS-ELVAAVSAWTSTRTPVQA 676 W +++ D +W R +V G+P+LA DP R A + + V A A + P +A Sbjct 671 WLALAVTDDAQWPRLCAVAGRPDLAADPGLATLAGRRATPAHDRVDAALAAWAAALPDRA 730 Query 677 AG--ALQAAGVAAGPMNRPSDILEDPQLIERNLFRDMVHPLIAR-PLPAETGPAPFR--- 730 G AL AGV A P+ + +L +PQL+ R F + HP++ P+P FR Sbjct 731 TGLAALAEAGVPAAPVTPAAALLANPQLVARGFFERLAHPVVGEHPMPGVA----FRLAS 786 Query 731 HIPQAPQRPAPLPGQDSVQICRKLLGMTADETERL 765 H +RPAP+ GQ ++ R LLG+T E E L Sbjct 787 HPGPLLRRPAPVFGQHDDEVYRDLLGLTHPEIEGL 821 Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 87/369 (24%), Positives = 130/369 (36%), Gaps = 61/369 (16%) Query 377 GLRILDLGIIVAGGELSRLFGDLGAEVIKVESADHPDGLRQTRV------GDAMSESFAW 430 G+R+L+L +AG +LF D GA+V+KVE D LR GD + Sbjct 17 GVRVLELSTQLAGPYCGKLFADAGADVVKVEPPGAGDPLRAWSASGAPLDGDGALFRYLN 76 Query 431 THRNHLALGLDLRNSEGKAIFGRLVAESDAVFANFKPGTLTSLGFSYDV-----LHAFNP 485 + +A D G L A +D V G D LHA NP Sbjct 77 ASKRSVAAEPDSPRVRG------LAAAADVVITGGALAGGNHAGHGLDAAAVRRLHADNP 130 Query 486 RIVLAGSSAFGNRGPWS---TRMGYGP---------LVRAATGVTRVWTSDEAQPDNSRH 533 R V+ S FG GPW+ G P L++A G T +A P Sbjct 131 RAVVVSISPFGLAGPWTGAGAAHGSQPPRDRAVNEFLLQALCGSTAARGEPDAAP----- 185 Query 534 PFYDATTIFPDHVVGRVGALLALAALIHRDRTGGGAHVHISQAEVVVNQLDTMFVA---- 589 A + G A++ LAAL R G G V +S E + + + V Sbjct 186 --LQAGGRIGEWAAGVYAAVVGLAALRGARRDGVGDLVDLSILECMTIMMGGLSVVGPTI 243 Query 590 ----------EAARATDVAEIHPDTSVHAVYPCAGDDEWCVISIRSDDEWRRATSVFGQP 639 R ++ I P G +C I+ + +++ + +P Sbjct 244 MGGPGPGVSGSPGRVPEIPSIVPTKD--------GLVGFCTITAQ---QFQDFLVLIERP 292 Query 640 ELANDPRFGASRSRVANRSELVAAVSAWTSTRTPVQAAGALQAAGVAAGPMNRPSDILED 699 +L D R A R E +AAV +W++ T + + P+ PS + Sbjct 293 DLLGDRDLALLARRHARRDEFLAAVHSWSTRHTTDEIVELAAGLRIPVTPVGTPSTVTTI 352 Query 700 PQLIERNLF 708 R +F Sbjct 353 DHFTARGVF 361 Score = 41.6 bits (96), Expect = 0.50, Method: Compositional matrix adjust. Identities = 70/277 (26%), Positives = 97/277 (36%), Gaps = 22/277 (7%) Query 3 TRLLADLGADVLKVEP---------PGGSPGRHVRPTLAGTSIGFAMHNANKRSAVLNPL 53 T LL LGADV+KVE GG P P+ F NANKR+ L Sbjct 437 TMLLGSLGADVIKVEGVTRPDGLRFAGGKP--PTEPSWWEWGTMFLATNANKRAVSLELS 494 Query 54 DESDRRRFLDLAASADIVVDCGLPGQAAAYGASCAELADRYRHLVALSITDFGAAGPRSS 113 + L + D+V++ P G + V + FG GP Sbjct 495 TREGQDLAQRLIGACDVVIENFTPRVLPNLGLDRDAVRAANPATVLTRMPAFGLDGPWRD 554 Query 114 WRATDPVLYAMSGALSRSGPTAGTPVLPPDGIASATAAVQAAWAVLVAYFNRLR---CGT 170 + SG +G G PV+ P G A + AA+A LVA R R G Sbjct 555 RTGFAQTMEQASGLAWLTGTRDGPPVI-PRGACDPIAGLHAAFATLVALTARDRPGGGGV 613 Query 171 GDYIDFSRFDAVVMALDPPFGAHGQVAAGIRSTGRWRGRPKNQDAY-----PIYPCRDGY 225 G +++ + ++V+ H A + G Q Y P P D + Sbjct 614 GAFVEATMVESVLNVAAELTVEHSAYGASLHRDGNRGPLAAPQGTYHCSRDPAGP--DVW 671 Query 226 VRFCVMAPRQWRGLRRWLGEPEDFQDPKYDVIGARLA 262 + V QW L G P+ DP + R A Sbjct 672 LALAVTDDAQWPRLCAVAGRPDLAADPGLATLAGRRA 708 >gi|254823157|ref|ZP_05228158.1| caib/baif family protein [Mycobacterium intracellulare ATCC 13950] Length=801 Score = 249 bits (636), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 227/788 (29%), Positives = 336/788 (43%), Gaps = 58/788 (7%) Query 4 RLLADLGADVLKVEPPGGSPGRHVRPTLA-----GTSIGFAMHNANKRSAVLNPLDESDR 58 +LL D GA V K+EPP G R + + GT+ F+ NA KRS P E D Sbjct 33 KLLLDAGAQVCKIEPPQGDWLRRYTASCSPVAEDGTAPFFSYLNAGKRSMTFAPGAE-DS 91 Query 59 RRFLDLAASADIVVDCGLPGQAAAYGASCAELADRYRHLVALSITDFGAAGPRSSWRATD 118 RF +AD+VV P +AAA G +L + V ++I+DFG +GP + A++ Sbjct 92 ARFRATLGAADVVVVTAGPARAAAMGIDPRQLLEHSPRAVIVTISDFGWSGPYADRAASE 151 Query 119 PVLYAMSGALSRSGPTAGTPVLPPDGIASATAAVQAAWAVLVAYFNRLRCGTGDYIDFSR 178 L A +G+ G AG P+ + V AA+ L R G G+++D S Sbjct 152 FTLQAWAGSPGFRGDPAGPPISIGGDLGEYMGGVFAAFGALAVRRRIERGGPGEHLDLSM 211 Query 179 FDAVVMALDPPFGAHGQV--AAGIRSTGRWRGRPKNQDAYPIYPCRDGYVRFCVMAPRQW 236 +A+ A+ H Q+ IR T + I P +DGYV ++ +QW Sbjct 212 LEALT-AMQSSEWLHSQLLRVPPIRRT---------TEVPSIEPAKDGYVGITMVTGQQW 261 Query 237 RGLRRWLGEP--EDFQDPKYDVIGARLAAWPQISVLVAKLCAEKTMKELVAAGQALGVPI 294 + P E+ + ++ + R I + AE+T+ E+V GQ +PI Sbjct 262 LDFAAMVECPQLEEIEQLRFQI--GRWQYRDLIREQIHPWLAERTVAEIVELGQLFRLPI 319 Query 295 TAVLTPSRILASEHFQAVGAITDAELVPGVRTGVPTGYFVVDGKRAGFRTPAPAAGQDEP 354 A+ S I E+ + A G P TP+ DE Sbjct 320 AALGNGSTIRDLEYVRQRDAFIHNP--AGFHQPRPPWLMSACAPARVGATPSLGEDDDES 377 Query 355 RWLADPAPVPPPSGRVGGYPFEGLRILDLGIIVAGGELSRLFGDLGAEVIKVESADHPDG 414 W D + P + G P G+RI+DL AG + L GA+V+K+ES PDG Sbjct 378 PWRRDESESEPA---LDGLPLAGVRIIDLTAFWAGPAATHLLAAFGADVVKIESIQRPDG 434 Query 415 LR-----QTRVGDAMSESFAW--THRNHLALGLDLRNSEGKAIFGRLVAESDAVFANFKP 467 +R +T V D + + + N ++ LDL + EG+ +F LVA +D V NF P Sbjct 435 IRYSGGMRTDVDDWWEYGWVFHAMNTNKRSVTLDLGSEEGRRLFTELVAGADVVIENFSP 494 Query 468 GTLTSLGFSYDVLHAFNPRIVLAGSSAFGNRGPWSTRMGYGPLVRAATGVTRVWTSDEAQ 527 + G + +VL NPR+V A AFG GPW R+G+ P + G+ V EA Sbjct 495 RVMEHFGLTAEVLLGVNPRLVFARMPAFGVEGPWRDRVGFAPTMEQIAGLAWVTGLPEAP 554 Query 528 PDNSRHPFYDATTIFPDHVVGRVGALLALAALIHRDRTGGGAHVHISQAEVVVNQLDTMF 587 P R D + G A LAAL +RT G V + E V+N Sbjct 555 PVTPRGAC--------DPLAGVHAAFAVLAALSFAERTEKGQLVELPMLETVLNATAIQA 606 Query 588 VAEAARATDVA---EIHPDTSVHAVYPCAGD-DEWCVISIRSDDEWRRATSVFGQPELAN 643 + ++ T++ +Y CAGD D+W ++IR D +W V +PE Sbjct 607 IESEVFGVTLSRRGNRGHGTAIQNIYRCAGDKDDWIAVTIRDDAQWHALVDVMDRPEWCR 666 Query 644 DPRFGASRSRVANRSELVAAVSAWTSTRTPVQAAGALQAAGVAAGPMNRPSDILEDPQLI 703 D R E+ A ++ W + +T L AG+ A P+ PS + ++PQL Sbjct 667 DEALSTVAGRRQRADEIDARLAEWFARQTLEPTVERLAGAGIPAAPVVSPSLVTDNPQLR 726 Query 704 ERNLFRDMVH---PLIARPLPAETGPAPFRHIPQAPQ---RPAPLPGQDSVQICRKLLGM 757 ER F + H L P P PF + RP P G+ + +I R G+ Sbjct 727 ERGFFEALHHGSTGLGLYPCP------PFALLDGQDHWLLRPPPKLGEHNEEILRDRCGL 780 Query 758 TADETERL 765 T +E RL Sbjct 781 TDEELTRL 788 Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 94/370 (26%), Positives = 144/370 (39%), Gaps = 19/370 (5%) Query 3 TRLLADLGADVLKVE----PPGGSPGRHVRPTLAG-TSIGFAMH--NANKRSAVLNPLDE 55 T LLA GADV+K+E P G +R + G+ H N NKRS L+ E Sbjct 413 THLLAAFGADVVKIESIQRPDGIRYSGGMRTDVDDWWEYGWVFHAMNTNKRSVTLDLGSE 472 Query 56 SDRRRFLDLAASADIVVDCGLPGQAAAYGASCAELADRYRHLVALSITDFGAAGPRSSWR 115 RR F +L A AD+V++ P +G + L LV + FG GP Sbjct 473 EGRRLFTELVAGADVVIENFSPRVMEHFGLTAEVLLGVNPRLVFARMPAFGVEGPWRDRV 532 Query 116 ATDPVLYAMSGALSRSGPTAGTPVLPPDGIASATAAVQAAWAVLVAYFNRLRCGTGDYID 175 P + ++G +G PV P G A V AA+AVL A R G ++ Sbjct 533 GFAPTMEQIAGLAWVTGLPEAPPVT-PRGACDPLAGVHAAFAVLAALSFAERTEKGQLVE 591 Query 176 FSRFDAVVMALDPPFGAHGQVAAGIRSTGRWRGRPKNQDAYPIYPC---RDGYVRFCVMA 232 + V+ A A G+ + R R IY C +D ++ + Sbjct 592 LPMLETVLNAT--AIQAIESEVFGV-TLSRRGNRGHGTAIQNIYRCAGDKDDWIAVTIRD 648 Query 233 PRQWRGLRRWLGEPEDFQDPKYDVIGARLAAWPQISVLVAKLCAEKTMKELVAAGQALGV 292 QW L + PE +D + R +I +A+ A +T++ V G+ Sbjct 649 DAQWHALVDVMDRPEWCRDEALSTVAGRRQRADEIDARLAEWFARQTLEPTVERLAGAGI 708 Query 293 PITAVLTPSRILASEHFQAVG---AITDAELVPGVRTGVPTGYFVVDGKRAGFRTPAPAA 349 P V++PS + + + G A+ G+ P + ++DG+ P P Sbjct 709 PAAPVVSPSLVTDNPQLRERGFFEALHHGSTGLGLYPCPP--FALLDGQDHWLLRPPPKL 766 Query 350 GQDEPRWLAD 359 G+ L D Sbjct 767 GEHNEEILRD 776 Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust. Identities = 63/305 (21%), Positives = 116/305 (39%), Gaps = 19/305 (6%) Query 374 PFEGLRILDLGIIVAGGELSRLFGDLGAEVIKVESADHPDGLRQTRVG------DAMSES 427 P LR++++ +AG +L D GA+V K+E D LR+ D + Sbjct 13 PLHDLRVVEISDRIAGSYCGKLLLDAGAQVCKIEPP-QGDWLRRYTASCSPVAEDGTAPF 71 Query 428 FAWTHRNHLALGLDLRNSEGKAIFGRLVAESDAVFANFKPGTLTSLGFSYDVLHAFNPRI 487 F++ + ++ +E A F + +D V P ++G L +PR Sbjct 72 FSYLNAGKRSMTF-APGAEDSARFRATLGAADVVVVTAGPARAAAMGIDPRQLLEHSPRA 130 Query 488 VLAGSSAFGNRGPWSTRMGYGPLVRAATGVTRVWTSDEAQPDNSRHPFYDATTIFPDHVV 547 V+ S FG GP++ R A+ + W + P +++ Sbjct 131 VIVTISDFGWSGPYADRA-------ASEFTLQAWAGSPGFRGDPAGPPISIGGDLGEYMG 183 Query 548 GRVGALLALAALIHRDRTGGGAHVHISQAEVVVNQLDTMFVAEAARATDVAEIHPDTSVH 607 G A ALA +R G G H+ +S E + + ++ ++ V I T V Sbjct 184 GVFAAFGALAVRRRIERGGPGEHLDLSMLEALTAMQSSEWL--HSQLLRVPPIRRTTEVP 241 Query 608 AVYPCAGDDEWCVISIRSDDEWRRATSVFGQPELANDPRFGASRSRVANRSELVAAVSAW 667 ++ P D + I++ + +W ++ P+L + R R + + W Sbjct 242 SIEPA--KDGYVGITMVTGQQWLDFAAMVECPQLEEIEQLRFQIGRWQYRDLIREQIHPW 299 Query 668 TSTRT 672 + RT Sbjct 300 LAERT 304 >gi|342857925|ref|ZP_08714581.1| caib/baif family protein [Mycobacterium colombiense CECT 3035] gi|342135258|gb|EGT88424.1| caib/baif family protein [Mycobacterium colombiense CECT 3035] Length=797 Score = 237 bits (605), Expect = 6e-60, Method: Compositional matrix adjust. Identities = 228/795 (29%), Positives = 338/795 (43%), Gaps = 76/795 (9%) Query 4 RLLADLGADVLKVEPPGGSPGRHVRPTLAGTSI-------GFAMHNANKRSAVLNPLDES 56 +LL D GA V K+EPP G R R + +G+SI F+ NA KRS P Sbjct 33 KLLRDAGAQVHKIEPPQGDWLR--RYSASGSSIPQDRTGPFFSYLNAGKRSMTWAP---- 86 Query 57 DRRRFLDLAASADIVVDCGLPGQAAAYGASCAELADRYRHLVALSITDFGAAGPRSSWRA 116 D +R+ D A AD+VV +AAA G +L + +S++DFG GP + A Sbjct 87 DSQRYRDELAGADVVVVTAGRARAAALGVDPPQLLQDSPRAIIVSVSDFGWDGPYAERAA 146 Query 117 TDPVLYAMSGALSRSGPTAGTPVLPPDGIASATAAVQAAWAVLVAYFNRLRCGTGDYIDF 176 T+ L A +G+ G AG P+ + V AA+ L R G G+++D Sbjct 147 TEFTLQAFAGSPGFRGDPAGPPISIGGDLGEYMGGVFAAFGALALRRRVERGGPGEHLDL 206 Query 177 SRFDAVVMALDPPFGAHGQV--AAGIRSTGRWRGRPKNQDAYPIYPCRDGYVRFCVMAPR 234 S +A+ + H Q+ IR T + I P +DGYV ++ + Sbjct 207 SMLEALTTMQSSEW-LHSQLLRVPPIRRT---------TEVPSIEPAKDGYVGITMVTGQ 256 Query 235 QWRGLRRWLGEP--EDFQDPKYDVIGARLAAWPQISVLVAKLCAEKTMKELVAAGQALGV 292 QW + P E+ + ++ + R I + AE+T+ E+V GQ + Sbjct 257 QWLDFAAMVECPQLEEIEQLRFQI--GRWQYRDLIREQIRPWLAERTVAEIVELGQLFRL 314 Query 293 PITAVLTPSRILASEHFQAVGAITDAELVPGVRTGVPTGYFVVDGKRAGFRTPAPAAGQD 352 PI A+ S I ++ + G G P V TP Sbjct 315 PIAALGNGSTIRELQYVRERGVFCHNPA--GFDQPRPPWLMSVCAPAPVGDTPVCGEADG 372 Query 353 EPRWL---ADPAPVPPPSGRVGGYPFEGLRILDLGIIVAGGELSRLFGDLGAEVIKVESA 409 E W +D AP + G P G+RI+DL AG + L GA+V+K+ES Sbjct 373 ESPWRRAESDAAP------ELDGLPLAGVRIVDLTAFWAGPAATHLLAAFGADVVKIESI 426 Query 410 DHPDGLR-----QTRVGDAMSESFAW--THRNHLALGLDLRNSEGKAIFGRLVAESDAVF 462 PDG+R +T V D + + + N ++ LDL + +G+ +F LVA +D V Sbjct 427 QRPDGIRYSGGMRTDVDDWWEYGWVFHAMNTNKRSVTLDLGSEQGRRLFTELVAGADVVI 486 Query 463 ANFKPGTLTSLGFSYDVLHAFNPRIVLAGSSAFGNRGPWSTRMGYGPLVRAATGVTRVWT 522 NF P + G + DVL A NP++V A AFG GPW R+G+ P + G+ V Sbjct 487 ENFSPRVMEQFGLTDDVLRAVNPKLVFARMPAFGVEGPWRDRVGFAPTMEQIAGLAWVTG 546 Query 523 SDEAQPDNSRHPFYDATTIFPDHVVGRVGALLALAALIHRDRTGGGAHVHISQAEVVVNQ 582 +A P R D + G A LAAL +RTG G V + E V+N Sbjct 547 LPDAPPVTPRGAC--------DPLAGVHAAFAVLAALNFAERTGTGQLVELPMLETVLNA 598 Query 583 L------DTMFVAEAARATDVAEIHPDTSVHAVYPCAGDDEWCVISIRSDDEWRRATSVF 636 +F A +R + ++ +Y CAG D+W I++R D +WR V Sbjct 599 TAIQAIESEVFGATLSRRGNRGH---GAAIQNIYRCAGSDDWIAITVRDDPQWRALVDVM 655 Query 637 GQPELANDPRFGASRSRVANRSELVAAVSAWTSTRTPVQAAGALQAAGVAAGPMNRPSDI 696 G+P D R ++ ++ W + + L AGV A P+ PS + Sbjct 656 GRPAWCGDDALSTIAGRRERADDIDGRLADWFAGQPLDPTVERLAGAGVPAAPVVSPSLV 715 Query 697 LEDPQLIERNLFRDMVHP---LIARPLPAETGPAPFRHIPQAPQ---RPAPLPGQDSVQI 750 ++PQL ER F + H L P P PF + Q RP P G+ + +I Sbjct 716 TDNPQLRERGFFESLHHASTGLGLYPCP------PFARLAGQDQWLLRPPPRLGEHNEEI 769 Query 751 CRKLLGMTADETERL 765 R G+T +E RL Sbjct 770 LRDRCGLTDEELTRL 784 Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 88/320 (28%), Positives = 122/320 (39%), Gaps = 13/320 (4%) Query 3 TRLLADLGADVLKVE----PPGGSPGRHVRPTLAG-TSIGFAMH--NANKRSAVLNPLDE 55 T LLA GADV+K+E P G +R + G+ H N NKRS L+ E Sbjct 410 THLLAAFGADVVKIESIQRPDGIRYSGGMRTDVDDWWEYGWVFHAMNTNKRSVTLDLGSE 469 Query 56 SDRRRFLDLAASADIVVDCGLPGQAAAYGASCAELADRYRHLVALSITDFGAAGPRSSWR 115 RR F +L A AD+V++ P +G + L LV + FG GP Sbjct 470 QGRRLFTELVAGADVVIENFSPRVMEQFGLTDDVLRAVNPKLVFARMPAFGVEGPWRDRV 529 Query 116 ATDPVLYAMSGALSRSGPTAGTPVLPPDGIASATAAVQAAWAVLVAYFNRLRCGTGDYID 175 P + ++G +G PV P G A V AA+AVL A R GTG ++ Sbjct 530 GFAPTMEQIAGLAWVTGLPDAPPVT-PRGACDPLAGVHAAFAVLAALNFAERTGTGQLVE 588 Query 176 FSRFDAVVMALDPPFGAHGQVAAGIRSTGRWRGRPKNQDAYPIYPC--RDGYVRFCVMAP 233 + V+ A A + G R IY C D ++ V Sbjct 589 LPMLETVLNATAIQAIESEVFGATLSRRG---NRGHGAAIQNIYRCAGSDDWIAITVRDD 645 Query 234 RQWRGLRRWLGEPEDFQDPKYDVIGARLAAWPQISVLVAKLCAEKTMKELVAAGQALGVP 293 QWR L +G P D I R I +A A + + V GVP Sbjct 646 PQWRALVDVMGRPAWCGDDALSTIAGRRERADDIDGRLADWFAGQPLDPTVERLAGAGVP 705 Query 294 ITAVLTPSRILASEHFQAVG 313 V++PS + + + G Sbjct 706 AAPVVSPSLVTDNPQLRERG 725 Score = 40.8 bits (94), Expect = 0.85, Method: Compositional matrix adjust. Identities = 69/336 (21%), Positives = 129/336 (39%), Gaps = 12/336 (3%) Query 374 PFEGLRILDLGIIVAGGELSRLFGDLGAEVIKVESADHPDGLRQTRVGDAMSESFAWTHR 433 P LR++++ +AG +L D GA+V K+E R + G ++ + Sbjct 13 PLHDLRVVEISDRIAGSYCGKLLRDAGAQVHKIEPPQGDWLRRYSASGSSIPQDRTGPFF 72 Query 434 NHLALGL-DLRNSEGKAIFGRLVAESDAVFANFKPGTLTSLGFSYDVLHAFNPRIVLAGS 492 ++L G + + + +A +D V +LG L +PR ++ Sbjct 73 SYLNAGKRSMTWAPDSQRYRDELAGADVVVVTAGRARAAALGVDPPQLLQDSPRAIIVSV 132 Query 493 SAFGNRGPWSTRMGYGPLVRAATGVTRVWTSDEAQPDNSRHPFYDATTIFPDHVVGRVGA 552 S FG GP++ R ++A G + + D A P S +++ G A Sbjct 133 SDFGWDGPYAERAATEFTLQAFAG-SPGFRGDPAGPPIS------IGGDLGEYMGGVFAA 185 Query 553 LLALAALIHRDRTGGGAHVHISQAEVVVNQLDTMFVAEAARATDVAEIHPDTSVHAVYPC 612 ALA +R G G H+ +S E + + ++ ++ V I T V ++ P Sbjct 186 FGALALRRRVERGGPGEHLDLSMLEALTTMQSSEWL--HSQLLRVPPIRRTTEVPSIEPA 243 Query 613 AGDDEWCVISIRSDDEWRRATSVFGQPELANDPRFGASRSRVANRSELVAAVSAWTSTRT 672 D + I++ + +W ++ P+L + R R + + W + RT Sbjct 244 --KDGYVGITMVTGQQWLDFAAMVECPQLEEIEQLRFQIGRWQYRDLIREQIRPWLAERT 301 Query 673 PVQAAGALQAAGVAAGPMNRPSDILEDPQLIERNLF 708 + Q + + S I E + ER +F Sbjct 302 VAEIVELGQLFRLPIAALGNGSTIRELQYVRERGVF 337 >gi|183983946|ref|YP_001852237.1| acyl-CoA transferase [Mycobacterium marinum M] gi|183177272|gb|ACC42382.1| conserved hypothetical acyl-CoA transferase [Mycobacterium marinum M] Length=801 Score = 237 bits (605), Expect = 6e-60, Method: Compositional matrix adjust. Identities = 227/788 (29%), Positives = 335/788 (43%), Gaps = 60/788 (7%) Query 4 RLLADLGADVLKVEPPGGSPGRHVRPTLAGTSIG------FAMHNANKRSAVLNPLDESD 57 +LL D GA V K+EPP G P R + A G + NA K+S L P D Sbjct 35 KLLVDAGAHVRKIEPPQGDPLRTYSASCAPVPEGAPAAPLYCYLNAGKQSLTLAP----D 90 Query 58 RRRFLDLAASADIVVDCGLPGQAAAYGASCAELADRYRHLVALSITDFGAAGPRSSWRAT 117 +R+ A+AD+++ QA G +L + ++I+DFG AGP + A+ Sbjct 91 SQRYRAELAAADVLIVTAGRSQAGGLGIDPVQLLADSPQAIIVTISDFGWAGPFAERAAS 150 Query 118 DPVLYAMSGALSRSGPTAGTPVLPPDGIASATAAVQAAWAVLVAYFNRLRCGTGDYIDFS 177 + L A +G+ G AG P+ + AA+ L R G G+++D S Sbjct 151 EFTLQAWAGSPGFRGDPAGPPISIGGDLGEYMGGAFAAFGALAISRRVERGGPGEHLDLS 210 Query 178 RFDAVVMALDPPFGAHGQV--AAGIRSTGRWRGRPKNQDAYPIYPCRDGYVRFCVMAPRQ 235 +A+ + + H Q+ +R T + I P +DGYV ++ +Q Sbjct 211 MLEAMALMQSSEW-LHSQLLQVPPVRRT---------LEVPSIVPVKDGYVGITMVTGQQ 260 Query 236 WRGLRRWLGEPEDFQDPKYDVIGARLAAWPQISVLVAKLCAEKTMKELVAAGQALGVPIT 295 W + PE P+ R I + AE+T++E+V GQ +PI Sbjct 261 WLDFCVMVECPELEDIPQLRFQIGRWEYRDLIRESIGPWMAERTVEEIVELGQLFRLPIA 320 Query 296 AVLTPSRILASEHFQAVGAITDAELVPGVRTGVPTGYFVVDGKRAGFRTPAPAAG-QDEP 354 A+ + I +H A G + G P RT AP A DEP Sbjct 321 ALGNGATIRNMDHMTARGVFVENPT--GFHQPRPPWLMSRCAPAPVGRTAAPGADVDDEP 378 Query 355 RWLA---DPAPVPPPSGRVGGYPFEGLRILDLGIIVAGGELSRLFGDLGAEVIKVESADH 411 RW A P PV G P EGLR++DL AG + L GA+V+K+ES Sbjct 379 RWSAAESKPKPVD------QGLPLEGLRVIDLTAFWAGPAATHLLAAFGADVVKIESIQR 432 Query 412 PDGLR-----QTRVGDAMSESFAW--THRNHLALGLDLRNSEGKAIFGRLVAESDAVFAN 464 PDG+R +T V D + + + N ++ LDL + EG+ +F RL+A++D V N Sbjct 433 PDGIRYSGGMRTDVDDWWEYGWVFHAMNTNKRSVTLDLGSVEGRGLFLRLIADADLVIEN 492 Query 465 FKPGTLTSLGFSYDVLHAFNPRIVLAGSSAFGNRGPWSTRMGYGPLVRAATGVTRVWTSD 524 F P + G S DVL NP++V+A AFG GPW R+G+ P + G+T + Sbjct 493 FSPRVMDHFGLSADVLLQANPKLVVARMPAFGLDGPWRERVGFAPTMEQIGGLTWLTGLS 552 Query 525 EAQPDNSRHPFYDATTIFPDHVVGRVGALLALAALIHRDRTGGGAHVHISQAEVVVNQLD 584 +A P R D + G A+ LAAL +RTG G V + E V+N Sbjct 553 DAPPVTPRGAC--------DPLAGVHAAVAVLAALSFAERTGLGQQVELPMVEAVLNTTA 604 Query 585 TM---FVAEAARATDVAEIHPDTSVHAVYPCAGDDE-WCVISIRSDDEWRRATSVFGQPE 640 F ++ +Y CAGDD+ W +S+ D +WR + P Sbjct 605 VQPIEFEVFGTTLGRRGNRGLGGALQNIYRCAGDDDHWIAVSVCDDRQWRALVDLMDDPP 664 Query 641 LANDPRFGASRSRVANRSELVAAVSAWTSTRTPVQAAGALQAAGVAAGPMNRPSDILEDP 700 D + R E+ + W + + L AAG+ A P+ PS + E+P Sbjct 665 WC-DAGLSTAAGRRDRADEVDGMLREWFAIQPRDSTVELLAAAGIPAAPVVSPSSVTENP 723 Query 701 QLIERNLFRDMVHPLIARPLPAETGPAPFRHIPQAPQ---RPAPLPGQDSVQICRKLLGM 757 QL R F ++HP R P PF + + RP P GQ + +I R G+ Sbjct 724 QLRGRGFFEGLLHP---RTGPMLYPTPPFARLAGQSEWLLRPPPTLGQHTEEILRDRCGL 780 Query 758 TADETERL 765 E ERL Sbjct 781 NEHELERL 788 Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 92/371 (25%), Positives = 135/371 (37%), Gaps = 22/371 (5%) Query 3 TRLLADLGADVLKVE----PPGGSPGRHVRPTLAG-TSIGFAMH--NANKRSAVLNPLDE 55 T LLA GADV+K+E P G +R + G+ H N NKRS L+ Sbjct 414 THLLAAFGADVVKIESIQRPDGIRYSGGMRTDVDDWWEYGWVFHAMNTNKRSVTLDLGSV 473 Query 56 SDRRRFLDLAASADIVVDCGLPGQAAAYGASCAELADRYRHLVALSITDFGAAGPRSSWR 115 R FL L A AD+V++ P +G S L LV + FG GP Sbjct 474 EGRGLFLRLIADADLVIENFSPRVMDHFGLSADVLLQANPKLVVARMPAFGLDGPWRERV 533 Query 116 ATDPVLYAMSGALSRSGPTAGTPVLPPDGIASATAAVQAAWAVLVAYFNRLRCGTGDYID 175 P + + G +G + PV P A + F R G G ++ Sbjct 534 GFAPTMEQIGGLTWLTGLSDAPPVTPRGACDPLAGVHAAVAVLAALSFAE-RTGLGQQVE 592 Query 176 FSRFDAVV--MALDP-PFGAHGQVAAGIRSTGRWRGRPKNQDAYPIYPCRDGYVRFCVMA 232 +AV+ A+ P F G + Q+ Y D ++ V Sbjct 593 LPMVEAVLNTTAVQPIEFEVFGTTLGRRGNR---GLGGALQNIYRCAGDDDHWIAVSVCD 649 Query 233 PRQWRGLRRWLGEPEDFQDPKYDVIGARLAAWPQISVLVAKLCAEKTMKELVAAGQALGV 292 RQWR L + +P + D R ++ ++ + A + V A G+ Sbjct 650 DRQWRALVDLMDDPP-WCDAGLSTAAGRRDRADEVDGMLREWFAIQPRDSTVELLAAAGI 708 Query 293 PITAVLTPSRILASEHFQAVGAITDAELVPGVRTG---VPTGYFV-VDGKRAGFRTPAPA 348 P V++PS + + + G + L P RTG PT F + G+ P P Sbjct 709 PAAPVVSPSSVTENPQLRGRG-FFEGLLHP--RTGPMLYPTPPFARLAGQSEWLLRPPPT 765 Query 349 AGQDEPRWLAD 359 GQ L D Sbjct 766 LGQHTEEILRD 776 >gi|342857420|ref|ZP_08714076.1| CoA-transferase [Mycobacterium colombiense CECT 3035] gi|342134753|gb|EGT87919.1| CoA-transferase [Mycobacterium colombiense CECT 3035] Length=782 Score = 236 bits (601), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 224/795 (29%), Positives = 333/795 (42%), Gaps = 68/795 (8%) Query 3 TRLLADLGADVLKVEPPGGSPGRH-VRPTLAGTSIGFAMHNANKRSAVLNPLDESDRRRF 61 T+L ADLGA+V+K+E P G P RH + F NA KRS V L + + Sbjct 22 TKLFADLGAEVIKIEAPEGDPFRHRISGDRNDADALFKFLNAGKRSVVGTALPDLE---- 77 Query 62 LDLAASADIVVDCGLPGQAAAYGASCAELADRYRHLVALSITDFGAAGPRSSWRATDPVL 121 L ASAD+ V+ PG L R HLV ++++ +G GP +T+ + Sbjct 78 -PLIASADVFVESLGPG-----ALDREALLRRAPHLVIVALSPYGLTGPYRDRPSTEFTI 131 Query 122 YAMSGALSRSGPTAGTPVLPPDGIASATAAVQAAWAVLVAYFNRLRCGTGDYIDFSRFDA 181 A SG L+ G P+ + A AA L A G G+ +D S ++ Sbjct 132 QAESGTLALRGRPDQPPIQAGGRVFEWVMAGYAAVGALGALRRAQLGGPGEIVDCSLLES 191 Query 182 VVMALDPPFGAHGQVAAGIRSTGRWRGRP------KNQDAYPIYPCRDGYVRFCVMAPRQ 235 ++ + ++A GRP + + I P DG+V F +Q Sbjct 192 CHLSASGFADLYHELA----------GRPPLPVPARQVEIPSIEPTADGWVGFNTNTRQQ 241 Query 236 WRGLRRWLGEPEDF--QDPKYDVIGARLAAWPQISVLVAKLCAEKTMKELVAAGQALGVP 293 + + E +D +DP + + R + + +V + ++ E+VA L +P Sbjct 242 FESFLAMI-ERQDLLDEDPAWALATTRWDRREKWNQIVREWTTRRSTDEIVALASDLRIP 300 Query 294 ITAVLTPSRILASEHFQAVGAITDAELVPGVRTGVPTGYFVVDGKRAGFRTPAPAAGQDE 353 ++ V +L F A G G T P + +DG+R PAP AG Sbjct 301 VSPVNDGQTVLDHPQFAARGVW--GTYADGSFTH-PLAPYRIDGRR-----PAPTAGAPP 352 Query 354 PRWLADPAPVPPPSGRVG-------GYPFEGLRILDLGIIVAGGELSRLFGDLGAEVIKV 406 L + A VP S R+G G P G+R+LD AG + + LGAEVI + Sbjct 353 ---LGEIAKVPAHS-RIGAVADRAPGLPLNGVRVLDATAWWAGPSSTHILAALGAEVIHL 408 Query 407 ESADHPDGLRQTRVGDA-------MSESFAWTHRNHLALGLDLRNSEGKAIFGRLVAESD 459 ES HPDG R A S + T+ N L LDL ++EG+ + LV SD Sbjct 409 ESTRHPDGARMAAAAFADRSQWWERSGMYLATNTNKRGLTLDLSSAEGRELLFGLVKCSD 468 Query 460 AVFANFKPGTLTSLGFSYDVLHAFNPRIVLAGSSAFGNRGPWSTRMGYGPLVRAATGVTR 519 + NF P + +++ + NPRIV+ AFG GPW +G+ + TG+ Sbjct 469 ILVENFSPRVFDNFAITWEAVSKQNPRIVMVRMPAFGLDGPWRNNVGFAQTMEQMTGMAW 528 Query 520 VWTSDEAQPDNSRHPFYDATTIFPDHVVGRVGALLALAALIHRDRTGGGAHVHISQAEVV 579 V + QP R P D + G A LA L RD TG G+ + +S E Sbjct 529 VTGHEHDQPRIPRGPC--------DPLAGMHSAFATLAGLRRRDETGRGSLIEVSMVEAA 580 Query 580 VNQLDTMFVAEAARATDVAEI---HPDTSVHAVYPCAGDDEWCVISIRSDDEWRRATSVF 636 +N V A ++ + D + +YPCAG + W IS+ +D++WRR S Sbjct 581 LNAAAEQVVEFTAYGNLISRLGNRSRDAAPQGLYPCAGTERWLAISVATDEQWRRLKSAL 640 Query 637 GQPELANDPRFGASRSRVANRSELVAAVSAWTSTRTPVQAAGALQAAGVAAGPMNRPSDI 696 +P+ ANDP RV + + W S AA L GV A + Sbjct 641 REPDWANDPALDTHDGRVRAHDVIDKHLEQWASQHDSSAAAELLVEHGVPAADLADARVS 700 Query 697 LEDPQLIERNLFRDMVHPLIARPLPAETGPAPFRHIPQAPQRPAPLPGQDSVQICRKLLG 756 PQL R F + HP++ R T P +R + + + AP GQ + I +LLG Sbjct 701 STHPQLAARGFFESLDHPVVGRH-HVPTIPFKYRSVDKWYRSTAPTLGQHNASILGELLG 759 Query 757 MTADETERLINERVM 771 + A L V+ Sbjct 760 LDAASITALTERGVI 774 Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 86/387 (23%), Positives = 151/387 (40%), Gaps = 58/387 (14%) Query 375 FEGLRILDLGIIVAGGELSRLFGDLGAEVIKVESADHPDGLRQTRVGDAMSESFAWTHRN 434 G+R+++ +AG ++LF DLGAEVIK+E A D R GD RN Sbjct 4 LRGVRVVEWATEIAGPYCTKLFADLGAEVIKIE-APEGDPFRHRISGD----------RN 52 Query 435 HLALGLDLRNSEGKAIFGR-------LVAESDAVFANFKPGTLTSLGFSYDVLHAFNPRI 487 N+ +++ G L+A +D + PG L + L P + Sbjct 53 DADALFKFLNAGKRSVVGTALPDLEPLIASADVFVESLGPGAL-----DREALLRRAPHL 107 Query 488 VLAGSSAFGNRGPWSTRMGYGPLVRAATGVTRVWTSDEAQPDNSRHPFYDATTIFPDHVV 547 V+ S +G GP+ R ++A +G + +PD P +F + V+ Sbjct 108 VIVALSPYGLTGPYRDRPSTEFTIQAESGTLAL----RGRPDQP--PIQAGGRVF-EWVM 160 Query 548 GRVGALLALAALIHRDRTGGGAHVHISQAEVVVNQLDTMFVAEAARATDVAEI------- 600 A+ AL AL R + GG + V + L++ ++ + A E+ Sbjct 161 AGYAAVGALGAL-RRAQLGGPGEI------VDCSLLESCHLSASGFADLYHELAGRPPLP 213 Query 601 --HPDTSVHAVYPCAGDDEWCVISIRSDDEWRRATSVFGQPELAN-DPRFGASRSRVANR 657 + ++ P A D W + + ++ ++ + +L + DP + + +R R Sbjct 214 VPARQVEIPSIEPTA--DGWVGFNTNTRQQFESFLAMIERQDLLDEDPAWALATTRWDRR 271 Query 658 SELVAAVSAWTSTRTPVQAAGALQAAGVAAGPMNRPSDILEDPQLIERNLFRDMVHPLIA 717 + V WT+ R+ + + P+N +L+ PQ R ++ Sbjct 272 EKWNQIVREWTTRRSTDEIVALASDLRIPVSPVNDGQTVLDHPQFAARGVWGTYADGSFT 331 Query 718 RPLPAETGPAPFRHIPQAPQRPAPLPG 744 PL AP+R +RPAP G Sbjct 332 HPL------APYR---IDGRRPAPTAG 349 >gi|73537727|ref|YP_298094.1| L-carnitine dehydratase/bile acid-inducible protein F [Ralstonia eutropha JMP134] gi|72121064|gb|AAZ63250.1| L-carnitine dehydratase/bile acid-inducible protein F [Ralstonia eutropha JMP134] Length=820 Score = 234 bits (598), Expect = 4e-59, Method: Compositional matrix adjust. Identities = 230/798 (29%), Positives = 348/798 (44%), Gaps = 61/798 (7%) Query 4 RLLADLGADVLKVEPPGGSPGRHVRPTL-----AGTSIGFAMHNANKRSAVLNPLDESDR 58 +L AD GA+V+KVE P G R + P + S FA N NKRS N + D Sbjct 32 KLCADFGAEVIKVESPAGDAWRQMPPMVDVPGAEPESALFAWLNTNKRSVTANADNAEDI 91 Query 59 RRFLDLAASADIVVDCGL----PGQAAAYGASCAELADRYRHLVALSITDFGAAGPRSSW 114 LA + D+V+D PG A+ S A A + +++T FG +GP S + Sbjct 92 AWIAQLARTCDVVLDARALTEGPGVLASSVWSGA--AQPPHEPIEVALTWFGESGPYSEY 149 Query 115 RATDPVLYAMSGALSRSGPTAGTPVLPPDGIASATAAVQAAWAVLVAYFNRLRCGTGDYI 174 + V ++GA+ SGP AG P +P D + +A A ++ VA G+ Y+ Sbjct 150 AGAESVCRGLAGAIHGSGPVAGPPHMPHD-VQTAIAVGLQVFSSAVAALIGSGQGSRRYV 208 Query 175 DFSRFDAVVMALDPPFGAHGQVAAGIRSTGRWRGRPKNQDAYP--IYPCRDGYVRFCVMA 232 S +AV ++ G + R R G + +P I+ G++ Sbjct 209 -LSAHEAVFGMVEMEAG----MVPDKRHPLRRLGVNRFCGTHPAGIFETAQGWIGIFTHT 263 Query 233 PRQWRGLRRWLGEPEDFQDPKYDVIGARLAAWPQISVLVAKLCAEKTMKELVAAGQALGV 292 QW+ L +G PE DP+Y R+A +I L+ +T +E Sbjct 264 LPQWKALCEAIGRPELGNDPRYANGQERMARADEIDDLLIPALRTRTAQEWFDILCDKKH 323 Query 293 PITAVLTPSRILASEHFQAVGAITDAELVPGVRTGVPTGYFVVDGKRAGFRTPAPAAGQD 352 P V T ++L + + A E + GV P +D PAPA G Sbjct 324 PAVIVPTMEQLLRQDVHRQRNAFVPVE-IGGVAFEGPVVPLRLDAAGPLLGGPAPAKGAH 382 Query 353 EPRWLA---DPAPVPPPSGRVG-GYPFEGLRILDLGIIVAGGELSRLFGDLGAEVIKVES 408 + + A D P P +G+R++DL + AG SR D GAE+IKVES Sbjct 383 DAFYRAAGLDHHPRRQLRQTASPQLPLQGIRVVDLTMGWAGPLASRTLADFGAEIIKVES 442 Query 409 ADHPDGLRQTRVGDAM--------SESFAWTHRNHLALGLDLRNSEGKAIFGRLVAESDA 460 +PD R + + +F +RN L + LDL EGK + LVA +DA Sbjct 443 TGYPDWWRGANFTEEFYRERLYEKNTNFHLMNRNKLGITLDLTQPEGKQLLLDLVARADA 502 Query 461 VFANFKPGTLTSLGFSYDVLHAFNPRIVLAGSSAFGNRGPWSTRMGYGPLVRAATGVTRV 520 V N+ L LG Y+ L A N R+V+ AFG WS YG + A+G+ Sbjct 503 VIENYSAEVLPKLGLDYEALRAVNERLVMVSMPAFGLGNAWSNTRAYGGTLEQASGLPLH 562 Query 521 WTSDEAQPDNSRHPFYDATTIFPDHVVGRVGALLALAALIHRDRTGGGAHVHISQAEVVV 580 + P + + + D F GA + L AL + TG G H+++SQ E ++ Sbjct 563 TGHPDGPPAMTSYAYGDPVGGF------NAGAAM-LLALFAQQATGKGRHLNLSQVEAML 615 Query 581 NQLDTMFVAEAARATDVA----EIHPDTSVHAVYPCAGDDEWCVISIRSDDEWRRATSVF 636 + F+ E + + VA HP H + CAGDD W V+++ D W Sbjct 616 -PMAAPFIIEQSVSGTVAPRRGNRHPVNVPHGCFRCAGDDAWVVLTV-PDAHWPALCRAI 673 Query 637 GQPELANDPRFGASRSRVANRSELVAAVSAWTSTRTPVQAAGALQAAGVAAGPMNRPSDI 696 G+ +LA D + + R + + AA++AW++ R P A +LQ AG+AAG + S + Sbjct 674 GREDLAADVQLAHAAGRRTQQDRIDAAITAWSAGRDPETAMQSLQQAGIAAGVVRPMSQV 733 Query 697 LEDPQLIERNLFR--DMVH--PLIARPLPAETG--PAPFRHIPQAPQRPAPLPGQDSVQI 750 L+D L R ++ D H P A TG P P RH +P G+ + ++ Sbjct 734 LQDKHLHARGFWQRVDRAHSGPYTASTAWCRTGIEPVPVRHA-------SPTLGEHTDEV 786 Query 751 CRKLLGMTAD---ETERL 765 ++LG++A E ERL Sbjct 787 LTRVLGLSAQRLAELERL 804 Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 82/327 (26%), Positives = 124/327 (38%), Gaps = 22/327 (6%) Query 1 MVTRLLADLGADVLKVEPPG--------GSPGRHVRPTLAGTSIGFAMHNANKRSAVLNP 52 + +R LAD GA+++KVE G R L + F + N NK L+ Sbjct 425 LASRTLADFGAEIIKVESTGYPDWWRGANFTEEFYRERLYEKNTNFHLMNRNKLGITLDL 484 Query 53 LDESDRRRFLDLAASADIVVDCGLPGQAAAYGASCAELADRYRHLVALSITDFGAAGPRS 112 ++ LDL A AD V++ G L LV +S+ FG S Sbjct 485 TQPEGKQLLLDLVARADAVIENYSAEVLPKLGLDYEALRAVNERLVMVSMPAFGLGNAWS 544 Query 113 SWRATDPVLYAMSGALSRSGPTAGTPVLPPDGIASATAAVQAAWAVLVAYFNRLRCGTGD 172 + RA L SG +G G P + A A+L+A F + G G Sbjct 545 NTRAYGGTLEQASGLPLHTGHPDGPPAMTSYAYGDPVGGFNAGAAMLLALFAQQATGKGR 604 Query 173 YIDFSRFDAVVMALDPPFGAHGQVAAGIRSTGRWRGRPKNQDAYPIYPC--RDGYVRFCV 230 +++ S+ +A ++ + PF Q +G + R P N + + C D +V V Sbjct 605 HLNLSQVEA-MLPMAAPFIIE-QSVSGTVAPRRGNRHPVNV-PHGCFRCAGDDAWVVLTV 661 Query 231 MAPRQWRGLRRWLGEPEDFQDPKYDVIGARLAAWPQISVLVAKLCA----EKTMKELVAA 286 W L R +G + D + R +I + A E M+ L A Sbjct 662 -PDAHWPALCRAIGREDLAADVQLAHAAGRRTQQDRIDAAITAWSAGRDPETAMQSLQQA 720 Query 287 GQALGVPITAVLTPSRILASEHFQAVG 313 G A GV V S++L +H A G Sbjct 721 GIAAGV----VRPMSQVLQDKHLHARG 743 Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 83/304 (28%), Positives = 117/304 (39%), Gaps = 36/304 (11%) Query 375 FEGLRILDLGIIVAGGELSRLFGDLGAEVIKVESADHPDGLRQ----TRVGDAMSES--F 428 GLR+L++G A +L D GAEVIKVES D RQ V A ES F Sbjct 13 LRGLRVLEIGTGPALAYAGKLCADFGAEVIKVESPAG-DAWRQMPPMVDVPGAEPESALF 71 Query 429 AWTHRNHLALGLDLRNSEGKAIFGRLVAESDAVF----ANFKPGTLTSLGFSYDVLHAFN 484 AW + N ++ + N+E A +L D V PG L S +S Sbjct 72 AWLNTNKRSVTANADNAEDIAWIAQLARTCDVVLDARALTEGPGVLASSVWSGAAQPPHE 131 Query 485 PRIVLAGSSAFGNRGPWSTRMGYGPLVRAATGVTRVWTSDEAQPDNSRHPFYDATTIFPD 544 P + + FG GP+S G + R G + A P + H A + Sbjct 132 P--IEVALTWFGESGPYSEYAGAESVCRGLAGAIH-GSGPVAGPPHMPHDVQTAIAVGLQ 188 Query 545 HVVGRVGALLALAALIHRDRTGGGAHVHISQAEVVVNQLDTMFVAEAARATDVAEIHPDT 604 V AL+ +G G+ ++ A V + M EA D + HP Sbjct 189 VFSSAVAALIG---------SGQGSRRYVLSAHEAVFGMVEM---EAGMVPD--KRHPLR 234 Query 605 SVHAVYPC----AGDDE----WCVISIRSDDEWRRATSVFGQPELANDPRFGASRSRVAN 656 + C AG E W I + +W+ G+PEL NDPR+ + R+A Sbjct 235 RLGVNRFCGTHPAGIFETAQGWIGIFTHTLPQWKALCEAIGRPELGNDPRYANGQERMAR 294 Query 657 RSEL 660 E+ Sbjct 295 ADEI 298 >gi|345011829|ref|YP_004814183.1| L-carnitine dehydratase/bile acid-inducible protein F [Streptomyces violaceusniger Tu 4113] gi|344038178|gb|AEM83903.1| L-carnitine dehydratase/bile acid-inducible protein F [Streptomyces violaceusniger Tu 4113] Length=766 Score = 234 bits (596), Expect = 6e-59, Method: Compositional matrix adjust. Identities = 243/785 (31%), Positives = 333/785 (43%), Gaps = 85/785 (10%) Query 4 RLLADLGADVLKVEPPGGSPGRHVRPTLAGTSIGFAMHNANKRSAVLNPLDESDRRRFLD 63 RLL LG +V+ VEP G P R L G + F +A KRS + P + RR ++ Sbjct 21 RLLVGLGYEVVLVEPEEGDPTRR---ELNGDA--FVHWHAGKRS--VTPASPEELRRLVE 73 Query 64 LAASADIVVDCGLPGQAAAYGASCAELADRYRHLVALSITDFGAAGPRSSWRATDPVLYA 123 AD+++D G P E HLV + +T FGA GPRS W+ TD V+ A Sbjct 74 ---GADVLLD-GTPD-------GVPEAVAGLDHLVHVRVTPFGAVGPRSHWQGTDLVVAA 122 Query 124 MSGALSRSGPTAGTPVLPPDGIASATAAVQAAWAVLVAYFNRLRCGTGDYIDFSRFDAVV 183 + G L++ G G P+ P+ A A V AA A L+ R R G G D S Sbjct 123 LGGMLAQVGDPDGPPLRLPENQAEQLAGVHAAIAALLGLRAR-RTGPGQLADVSAQACAA 181 Query 184 MALDPPFGAHGQVAAGIRSTGRWRGRPKNQDAYPIYPCRDGYVRFC--------VMAPRQ 235 AL G +A R GRP +P+ P G R +PR Sbjct 182 AAL-----EAGTLA--YLHEDRVPGRPGR--VHPLVP--HGLFRAADGYLGGGLGGSPRM 230 Query 236 WRGLRRWL---GEPEDFQDPKYDVIGARLAAWPQISVLVAKLCAEKTMKELVAAGQALGV 292 W L WL G D +P++ R + +V E Q+ + Sbjct 231 WDALLLWLREEGAEADLAEPRWQDPVERKKYQEHVFEVVQDFAGRWPKAEFAELAQSRKL 290 Query 293 PITAVLTPSRILASEHFQAVGAITDAELVPGVRTGVPTGYFVVDGKRAGFRTPAPAAGQD 352 P AV P + + A D L G RT + + +G R P G D Sbjct 291 PWAAVDLPHEMPGNPQLAA----RDFFLRAGGRTDLGFPFAFPEGHRIK-ELDVPERGAD 345 Query 353 EPRWLAD--PAP-VPPPSGRVGGYPFEGLRILDLGIIVAGGELSRLFGDLGAEVIKVESA 409 + R L + PAP VP S G+R+LDL ++AG +++ D GA+V+KVES Sbjct 346 Q-RLLGEHRPAPRVPAASAEPARPALHGVRVLDLTWVLAGPYCTKVLADHGADVVKVESL 404 Query 410 DHPDGLRQTRVGDAMSES------------FAWTHRNHLALGLDLRNSEGKAIFGRLVAE 457 PD TR M S F +RN +L LD R +G A+ L+A Sbjct 405 GRPD---PTRFAPFMHLSRGPHTDPNTNGYFNEVNRNKRSLALDTRTEDGIAVLRDLIAS 461 Query 458 SDAVFANFKPGTLTSLGFSYDVLHAFNPRIVLAGSSAFGNRGPWSTRMGYGPLVRAATGV 517 D + NF +T LG YD L NPR+V S G+ GP S + Y V A++G+ Sbjct 462 CDVLVENFSATVMTKLGLGYDTLREINPRLVYVSMSGMGHSGPRSGWVSYADTVSASSGL 521 Query 518 TRV--WTSDEAQPDNSRHPFYDATTIFPDHVVGRVGALLALAALIHRDRTGGGAHVHISQ 575 T + W PD+ Y I V G AL AAL HR+RTG G H+ +SQ Sbjct 522 TGLTGWG-----PDDVVGVIYGHGDI----VAGLQAALATTAALEHRERTGRGQHIDLSQ 572 Query 576 AEVVVNQLDTMFV--AEAARATDVAEIHPDTSVHAVYPCAGDDEWCVISIRSDDEWRRAT 633 E + + + T + E A TD P VY C G D W +S+R D EW R Sbjct 573 LEAIASHMGTSLLNPVEPAGNTD-----PRWRPQGVYRCLGADRWLAVSVRDDTEWARLC 627 Query 634 SVFGQPELANDPRFGASRSRVANRSELVAAVSAWTSTRTPVQAAGALQAAGVAAGPMNRP 693 +V G P LA D R + R + + A++ W T AA LQ G+ AG + Sbjct 628 TVIGHPGLATDERTRTAADRAHHADLVDDALATWARTLPADAAAELLQEQGIPAGAVQDG 687 Query 694 SDILE-DPQLIERNLFRDMVHPLIARPLPAETGPAPFRHIPQAPQRPAPLPGQDSVQICR 752 D++E DPQL R + HP +A E P P + AP+ G D+ + R Sbjct 688 RDLVEQDPQLRARGFYVRAEHP-VAGAFLHEGPPIRLTRTPGGVRTAAPVLGADTDDVLR 746 Query 753 KLLGM 757 + G+ Sbjct 747 DVAGL 751 Lambda K H 0.320 0.136 0.421 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 1868510904120 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40