BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv1870c Length=211 Score E Sequences producing significant alignments: (Bits) Value gi|15609007|ref|NP_216386.1| hypothetical protein Rv1870c [Mycob... 421 4e-116 gi|31793060|ref|NP_855553.1| hypothetical protein Mb1901c [Mycob... 421 4e-116 gi|148823081|ref|YP_001287835.1| hypothetical protein TBFG_11898... 418 3e-115 gi|289443347|ref|ZP_06433091.1| conserved hypothetical protein [... 407 4e-112 gi|167970352|ref|ZP_02552629.1| hypothetical protein MtubH3_2091... 407 4e-112 gi|289753964|ref|ZP_06513342.1| conserved hypothetical protein [... 406 9e-112 gi|339294806|gb|AEJ46917.1| hypothetical protein CCDC5079_1727 [... 399 1e-109 gi|342861226|ref|ZP_08717874.1| hypothetical protein MCOL_20181 ... 298 3e-79 gi|240170506|ref|ZP_04749165.1| hypothetical protein MkanA1_1443... 291 5e-77 gi|296164869|ref|ZP_06847425.1| endonuclease III family protein ... 285 4e-75 gi|41407679|ref|NP_960515.1| hypothetical protein MAP1581c [Myco... 284 7e-75 gi|336457518|gb|EGO36524.1| hypothetical protein MAPs_21900 [Myc... 281 5e-74 gi|254775323|ref|ZP_05216839.1| hypothetical protein MaviaA2_117... 280 1e-73 gi|118463692|ref|YP_882033.1| hypothetical protein MAV_2847 [Myc... 277 6e-73 gi|254819321|ref|ZP_05224322.1| hypothetical protein MintA_05318... 275 4e-72 gi|333990597|ref|YP_004523211.1| hypothetical protein JDM601_195... 255 3e-66 gi|119868853|ref|YP_938805.1| hypothetical protein Mkms_2821 [My... 252 2e-65 gi|108799743|ref|YP_639940.1| hypothetical protein Mmcs_2777 [My... 251 4e-65 gi|126435384|ref|YP_001071075.1| hypothetical protein Mjls_2804 ... 251 5e-65 gi|315444255|ref|YP_004077134.1| hypothetical protein Mspyr1_266... 250 1e-64 gi|145223923|ref|YP_001134601.1| hypothetical protein Mflv_3337 ... 236 1e-60 gi|226359642|ref|YP_002777420.1| hypothetical protein ROP_02280 ... 194 5e-48 gi|343928029|ref|ZP_08767494.1| hypothetical protein GOALK_100_0... 194 9e-48 gi|312139889|ref|YP_004007225.1| hypothetical protein REQ_25050 ... 188 5e-46 gi|325674232|ref|ZP_08153921.1| endonuclease III family protein ... 188 6e-46 gi|328882550|emb|CCA55789.1| hypothetical protein SVEN_2503 [Str... 173 2e-41 gi|256393971|ref|YP_003115535.1| hypothetical protein Caci_4833 ... 172 4e-41 gi|326333016|ref|ZP_08199272.1| hypothetical protein NBCG_04456 ... 171 8e-41 gi|291299531|ref|YP_003510809.1| hypothetical protein Snas_2021 ... 170 1e-40 gi|297563725|ref|YP_003682699.1| endonuclease III-like protein [... 164 6e-39 gi|159038109|ref|YP_001537362.1| hypothetical protein Sare_2528 ... 163 2e-38 gi|145594918|ref|YP_001159215.1| hypothetical protein Strop_2390... 160 1e-37 gi|117165263|emb|CAJ88824.1| putative endonuclease III-like prot... 159 2e-37 gi|302526875|ref|ZP_07279217.1| conserved hypothetical protein [... 159 2e-37 gi|29828148|ref|NP_822782.1| endonuclease III-like protein [Stre... 159 3e-37 gi|302541039|ref|ZP_07293381.1| conserved hypothetical protein [... 154 6e-36 gi|302562117|ref|ZP_07314459.1| conserved hypothetical protein [... 154 1e-35 gi|269125834|ref|YP_003299204.1| hypothetical protein Tcur_1590 ... 152 3e-35 gi|320006885|gb|ADW01735.1| hypothetical protein Sfla_0267 [Stre... 152 4e-35 gi|345010736|ref|YP_004813090.1| endonuclease III-like protein [... 152 4e-35 gi|337769409|emb|CCB78122.1| conserved protein of unknown functi... 150 8e-35 gi|134096776|ref|YP_001102437.1| endonuclease III-like protein [... 148 4e-34 gi|291435768|ref|ZP_06575158.1| conserved hypothetical protein [... 148 4e-34 gi|302555579|ref|ZP_07307921.1| conserved hypothetical protein [... 147 1e-33 gi|297196328|ref|ZP_06913726.1| conserved hypothetical protein [... 146 2e-33 gi|345003861|ref|YP_004806715.1| hypothetical protein SACTE_6405... 145 3e-33 gi|257067724|ref|YP_003153979.1| hypothetical protein Bfae_05210... 143 1e-32 gi|302867699|ref|YP_003836336.1| hypothetical protein Micau_3231... 142 2e-32 gi|330468131|ref|YP_004405874.1| hypothetical protein VAB18032_2... 138 6e-31 gi|182434279|ref|YP_001821998.1| hypothetical protein SGR_486 [S... 137 9e-31 >gi|15609007|ref|NP_216386.1| hypothetical protein Rv1870c [Mycobacterium tuberculosis H37Rv] gi|15841339|ref|NP_336376.1| hypothetical protein MT1919 [Mycobacterium tuberculosis CDC1551] gi|148661676|ref|YP_001283199.1| hypothetical protein MRA_1881 [Mycobacterium tuberculosis H37Ra] 26 more sequence titles Length=211 Score = 421 bits (1081), Expect = 4e-116, Method: Compositional matrix adjust. Identities = 210/211 (99%), Positives = 211/211 (100%), Gaps = 0/211 (0%) Query 1 LPPRIAGMRLLVIKPEPLARRLLKLAGTTYAAEAGIRIRDKPMPLFQLLVLCMLASKPIG 60 +PPRIAGMRLLVIKPEPLARRLLKLAGTTYAAEAGIRIRDKPMPLFQLLVLCMLASKPIG Sbjct 1 MPPRIAGMRLLVIKPEPLARRLLKLAGTTYAAEAGIRIRDKPMPLFQLLVLCMLASKPIG 60 Query 61 AATAARAARELFCSGLRTPKAVLSAERQTMISAFGRAHYVRYDESSATRLTAIAHRVRDE 120 AATAARAARELFCSGLRTPKAVLSAERQTMISAFGRAHYVRYDESSATRLTAIAHRVRDE Sbjct 61 AATAARAARELFCSGLRTPKAVLSAERQTMISAFGRAHYVRYDESSATRLTAIAHRVRDE 120 Query 121 YSGDLRELAQRTRPDVSAAKRMLKTFNGIGDTGADIFLREVQDVWIWVRPYFDDRATAAA 180 YSGDLRELAQRTRPDVSAAKRMLKTFNGIGDTGADIFLREVQDVWIWVRPYFDDRATAAA Sbjct 121 YSGDLRELAQRTRPDVSAAKRMLKTFNGIGDTGADIFLREVQDVWIWVRPYFDDRATAAA 180 Query 181 KQLGLPTDPKKLASVAPSSNALLAAALVRVA 211 KQLGLPTDPKKLASVAPSSNALLAAALVRVA Sbjct 181 KQLGLPTDPKKLASVAPSSNALLAAALVRVA 211 >gi|31793060|ref|NP_855553.1| hypothetical protein Mb1901c [Mycobacterium bovis AF2122/97] gi|121637773|ref|YP_977996.1| hypothetical protein BCG_1906c [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224990257|ref|YP_002644944.1| hypothetical protein JTY_1890 [Mycobacterium bovis BCG str. Tokyo 172] gi|31618651|emb|CAD94604.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium bovis AF2122/97] gi|121493420|emb|CAL71893.1| Conserved hypothetical protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224773370|dbj|BAH26176.1| hypothetical protein JTY_1890 [Mycobacterium bovis BCG str. Tokyo 172] gi|341601800|emb|CCC64474.1| conserved hypothetical protein [Mycobacterium bovis BCG str. Moreau RDJ] Length=222 Score = 421 bits (1081), Expect = 4e-116, Method: Compositional matrix adjust. Identities = 210/211 (99%), Positives = 211/211 (100%), Gaps = 0/211 (0%) Query 1 LPPRIAGMRLLVIKPEPLARRLLKLAGTTYAAEAGIRIRDKPMPLFQLLVLCMLASKPIG 60 +PPRIAGMRLLVIKPEPLARRLLKLAGTTYAAEAGIRIRDKPMPLFQLLVLCMLASKPIG Sbjct 1 MPPRIAGMRLLVIKPEPLARRLLKLAGTTYAAEAGIRIRDKPMPLFQLLVLCMLASKPIG 60 Query 61 AATAARAARELFCSGLRTPKAVLSAERQTMISAFGRAHYVRYDESSATRLTAIAHRVRDE 120 AATAARAARELFCSGLRTPKAVLSAERQTMISAFGRAHYVRYDESSATRLTAIAHRVRDE Sbjct 61 AATAARAARELFCSGLRTPKAVLSAERQTMISAFGRAHYVRYDESSATRLTAIAHRVRDE 120 Query 121 YSGDLRELAQRTRPDVSAAKRMLKTFNGIGDTGADIFLREVQDVWIWVRPYFDDRATAAA 180 YSGDLRELAQRTRPDVSAAKRMLKTFNGIGDTGADIFLREVQDVWIWVRPYFDDRATAAA Sbjct 121 YSGDLRELAQRTRPDVSAAKRMLKTFNGIGDTGADIFLREVQDVWIWVRPYFDDRATAAA 180 Query 181 KQLGLPTDPKKLASVAPSSNALLAAALVRVA 211 KQLGLPTDPKKLASVAPSSNALLAAALVRVA Sbjct 181 KQLGLPTDPKKLASVAPSSNALLAAALVRVA 211 >gi|148823081|ref|YP_001287835.1| hypothetical protein TBFG_11898 [Mycobacterium tuberculosis F11] gi|148721608|gb|ABR06233.1| conserved hypothetical protein [Mycobacterium tuberculosis F11] Length=211 Score = 418 bits (1074), Expect = 3e-115, Method: Compositional matrix adjust. Identities = 209/211 (99%), Positives = 210/211 (99%), Gaps = 0/211 (0%) Query 1 LPPRIAGMRLLVIKPEPLARRLLKLAGTTYAAEAGIRIRDKPMPLFQLLVLCMLASKPIG 60 +PPRIAGMRLLVIKPEPLARRLLKLAGTTYAAEAGIRIRDKPMPLFQLLVLCMLASKPIG Sbjct 1 MPPRIAGMRLLVIKPEPLARRLLKLAGTTYAAEAGIRIRDKPMPLFQLLVLCMLASKPIG 60 Query 61 AATAARAARELFCSGLRTPKAVLSAERQTMISAFGRAHYVRYDESSATRLTAIAHRVRDE 120 AATAARAARELFCSGLRTPKAVLSAERQTMISAFGRAHYVRYDESSATRLTAIAHRVRDE Sbjct 61 AATAARAARELFCSGLRTPKAVLSAERQTMISAFGRAHYVRYDESSATRLTAIAHRVRDE 120 Query 121 YSGDLRELAQRTRPDVSAAKRMLKTFNGIGDTGADIFLREVQDVWIWVRPYFDDRATAAA 180 YS DLRELAQRTRPDVSAAKRMLKTFNGIGDTGADIFLREVQDVWIWVRPYFDDRATAAA Sbjct 121 YSDDLRELAQRTRPDVSAAKRMLKTFNGIGDTGADIFLREVQDVWIWVRPYFDDRATAAA 180 Query 181 KQLGLPTDPKKLASVAPSSNALLAAALVRVA 211 KQLGLPTDPKKLASVAPSSNALLAAALVRVA Sbjct 181 KQLGLPTDPKKLASVAPSSNALLAAALVRVA 211 >gi|289443347|ref|ZP_06433091.1| conserved hypothetical protein [Mycobacterium tuberculosis T46] gi|289447484|ref|ZP_06437228.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A] gi|289569947|ref|ZP_06450174.1| conserved hypothetical protein [Mycobacterium tuberculosis T17] 7 more sequence titles Length=215 Score = 407 bits (1047), Expect = 4e-112, Method: Compositional matrix adjust. Identities = 204/204 (100%), Positives = 204/204 (100%), Gaps = 0/204 (0%) Query 8 MRLLVIKPEPLARRLLKLAGTTYAAEAGIRIRDKPMPLFQLLVLCMLASKPIGAATAARA 67 MRLLVIKPEPLARRLLKLAGTTYAAEAGIRIRDKPMPLFQLLVLCMLASKPIGAATAARA Sbjct 1 MRLLVIKPEPLARRLLKLAGTTYAAEAGIRIRDKPMPLFQLLVLCMLASKPIGAATAARA 60 Query 68 ARELFCSGLRTPKAVLSAERQTMISAFGRAHYVRYDESSATRLTAIAHRVRDEYSGDLRE 127 ARELFCSGLRTPKAVLSAERQTMISAFGRAHYVRYDESSATRLTAIAHRVRDEYSGDLRE Sbjct 61 ARELFCSGLRTPKAVLSAERQTMISAFGRAHYVRYDESSATRLTAIAHRVRDEYSGDLRE 120 Query 128 LAQRTRPDVSAAKRMLKTFNGIGDTGADIFLREVQDVWIWVRPYFDDRATAAAKQLGLPT 187 LAQRTRPDVSAAKRMLKTFNGIGDTGADIFLREVQDVWIWVRPYFDDRATAAAKQLGLPT Sbjct 121 LAQRTRPDVSAAKRMLKTFNGIGDTGADIFLREVQDVWIWVRPYFDDRATAAAKQLGLPT 180 Query 188 DPKKLASVAPSSNALLAAALVRVA 211 DPKKLASVAPSSNALLAAALVRVA Sbjct 181 DPKKLASVAPSSNALLAAALVRVA 204 >gi|167970352|ref|ZP_02552629.1| hypothetical protein MtubH3_20918 [Mycobacterium tuberculosis H37Ra] gi|254550881|ref|ZP_05141328.1| hypothetical protein Mtube_10551 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|294996779|ref|ZP_06802470.1| hypothetical protein Mtub2_20303 [Mycobacterium tuberculosis 210] gi|297634431|ref|ZP_06952211.1| hypothetical protein MtubK4_09931 [Mycobacterium tuberculosis KZN 4207] gi|297731418|ref|ZP_06960536.1| hypothetical protein MtubKR_10031 [Mycobacterium tuberculosis KZN R506] gi|313658752|ref|ZP_07815632.1| hypothetical protein MtubKV_10046 [Mycobacterium tuberculosis KZN V2475] gi|323719611|gb|EGB28734.1| hypothetical protein TMMG_01127 [Mycobacterium tuberculosis CDC1551A] Length=204 Score = 407 bits (1047), Expect = 4e-112, Method: Compositional matrix adjust. Identities = 204/204 (100%), Positives = 204/204 (100%), Gaps = 0/204 (0%) Query 8 MRLLVIKPEPLARRLLKLAGTTYAAEAGIRIRDKPMPLFQLLVLCMLASKPIGAATAARA 67 MRLLVIKPEPLARRLLKLAGTTYAAEAGIRIRDKPMPLFQLLVLCMLASKPIGAATAARA Sbjct 1 MRLLVIKPEPLARRLLKLAGTTYAAEAGIRIRDKPMPLFQLLVLCMLASKPIGAATAARA 60 Query 68 ARELFCSGLRTPKAVLSAERQTMISAFGRAHYVRYDESSATRLTAIAHRVRDEYSGDLRE 127 ARELFCSGLRTPKAVLSAERQTMISAFGRAHYVRYDESSATRLTAIAHRVRDEYSGDLRE Sbjct 61 ARELFCSGLRTPKAVLSAERQTMISAFGRAHYVRYDESSATRLTAIAHRVRDEYSGDLRE 120 Query 128 LAQRTRPDVSAAKRMLKTFNGIGDTGADIFLREVQDVWIWVRPYFDDRATAAAKQLGLPT 187 LAQRTRPDVSAAKRMLKTFNGIGDTGADIFLREVQDVWIWVRPYFDDRATAAAKQLGLPT Sbjct 121 LAQRTRPDVSAAKRMLKTFNGIGDTGADIFLREVQDVWIWVRPYFDDRATAAAKQLGLPT 180 Query 188 DPKKLASVAPSSNALLAAALVRVA 211 DPKKLASVAPSSNALLAAALVRVA Sbjct 181 DPKKLASVAPSSNALLAAALVRVA 204 >gi|289753964|ref|ZP_06513342.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054] gi|289694551|gb|EFD61980.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054] Length=215 Score = 406 bits (1044), Expect = 9e-112, Method: Compositional matrix adjust. Identities = 203/204 (99%), Positives = 204/204 (100%), Gaps = 0/204 (0%) Query 8 MRLLVIKPEPLARRLLKLAGTTYAAEAGIRIRDKPMPLFQLLVLCMLASKPIGAATAARA 67 MRLLVIKPEPLARRLLKLAGTTYAAEAGIRIRDKPMPLFQLLVLCMLASKPIGAATAARA Sbjct 1 MRLLVIKPEPLARRLLKLAGTTYAAEAGIRIRDKPMPLFQLLVLCMLASKPIGAATAARA 60 Query 68 ARELFCSGLRTPKAVLSAERQTMISAFGRAHYVRYDESSATRLTAIAHRVRDEYSGDLRE 127 ARELFCSGLRTPKAVLSAERQTMISAFGRAHYVRYDESSATRLTAIAHRVRDEYSGDLRE Sbjct 61 ARELFCSGLRTPKAVLSAERQTMISAFGRAHYVRYDESSATRLTAIAHRVRDEYSGDLRE 120 Query 128 LAQRTRPDVSAAKRMLKTFNGIGDTGADIFLREVQDVWIWVRPYFDDRATAAAKQLGLPT 187 LAQRTRPDVSAAKRMLKTFNGIGDTGADIFLR+VQDVWIWVRPYFDDRATAAAKQLGLPT Sbjct 121 LAQRTRPDVSAAKRMLKTFNGIGDTGADIFLRQVQDVWIWVRPYFDDRATAAAKQLGLPT 180 Query 188 DPKKLASVAPSSNALLAAALVRVA 211 DPKKLASVAPSSNALLAAALVRVA Sbjct 181 DPKKLASVAPSSNALLAAALVRVA 204 >gi|339294806|gb|AEJ46917.1| hypothetical protein CCDC5079_1727 [Mycobacterium tuberculosis CCDC5079] gi|339298432|gb|AEJ50542.1| hypothetical protein CCDC5180_1705 [Mycobacterium tuberculosis CCDC5180] Length=200 Score = 399 bits (1025), Expect = 1e-109, Method: Compositional matrix adjust. Identities = 199/200 (99%), Positives = 200/200 (100%), Gaps = 0/200 (0%) Query 12 VIKPEPLARRLLKLAGTTYAAEAGIRIRDKPMPLFQLLVLCMLASKPIGAATAARAAREL 71 +IKPEPLARRLLKLAGTTYAAEAGIRIRDKPMPLFQLLVLCMLASKPIGAATAARAAREL Sbjct 1 MIKPEPLARRLLKLAGTTYAAEAGIRIRDKPMPLFQLLVLCMLASKPIGAATAARAAREL 60 Query 72 FCSGLRTPKAVLSAERQTMISAFGRAHYVRYDESSATRLTAIAHRVRDEYSGDLRELAQR 131 FCSGLRTPKAVLSAERQTMISAFGRAHYVRYDESSATRLTAIAHRVRDEYSGDLRELAQR Sbjct 61 FCSGLRTPKAVLSAERQTMISAFGRAHYVRYDESSATRLTAIAHRVRDEYSGDLRELAQR 120 Query 132 TRPDVSAAKRMLKTFNGIGDTGADIFLREVQDVWIWVRPYFDDRATAAAKQLGLPTDPKK 191 TRPDVSAAKRMLKTFNGIGDTGADIFLREVQDVWIWVRPYFDDRATAAAKQLGLPTDPKK Sbjct 121 TRPDVSAAKRMLKTFNGIGDTGADIFLREVQDVWIWVRPYFDDRATAAAKQLGLPTDPKK 180 Query 192 LASVAPSSNALLAAALVRVA 211 LASVAPSSNALLAAALVRVA Sbjct 181 LASVAPSSNALLAAALVRVA 200 >gi|342861226|ref|ZP_08717874.1| hypothetical protein MCOL_20181 [Mycobacterium colombiense CECT 3035] gi|342131126|gb|EGT84407.1| hypothetical protein MCOL_20181 [Mycobacterium colombiense CECT 3035] Length=208 Score = 298 bits (763), Expect = 3e-79, Method: Compositional matrix adjust. Identities = 148/192 (78%), Positives = 162/192 (85%), Gaps = 0/192 (0%) Query 20 RRLLKLAGTTYAAEAGIRIRDKPMPLFQLLVLCMLASKPIGAATAARAARELFCSGLRTP 79 RRLL +AGTTYAA+A I + DKPMPLF+LLVLCMLASKPI A A AARELF +GLRTP Sbjct 6 RRLLDVAGTTYAAQARITMSDKPMPLFELLVLCMLASKPIDAGIATAAARELFKAGLRTP 65 Query 80 KAVLSAERQTMISAFGRAHYVRYDESSATRLTAIAHRVRDEYSGDLRELAQRTRPDVSAA 139 KAVL A RQTMI AFGRAHYVRYDESSATRL +A RVRDEYSGDLR LA+R+R D +AA Sbjct 66 KAVLQANRQTMIDAFGRAHYVRYDESSATRLADMAERVRDEYSGDLRLLAERSRHDSAAA 125 Query 140 KRMLKTFNGIGDTGADIFLREVQDVWIWVRPYFDDRATAAAKQLGLPTDPKKLASVAPSS 199 KRMLK F GIGDTGADI+LREVQDVW WVRP+FDDR T AK+LGLP DPKKL S+AP Sbjct 126 KRMLKQFKGIGDTGADIYLREVQDVWTWVRPHFDDRTTGTAKRLGLPADPKKLGSLAPQD 185 Query 200 NALLAAALVRVA 211 NA LAAALVRV+ Sbjct 186 NARLAAALVRVS 197 >gi|240170506|ref|ZP_04749165.1| hypothetical protein MkanA1_14430 [Mycobacterium kansasii ATCC 12478] Length=226 Score = 291 bits (744), Expect = 5e-77, Method: Compositional matrix adjust. Identities = 141/180 (79%), Positives = 155/180 (87%), Gaps = 0/180 (0%) Query 14 KPEPLARRLLKLAGTTYAAEAGIRIRDKPMPLFQLLVLCMLASKPIGAATAARAARELFC 73 KPEP +RLL++AGT+YAAEAGIRI DKPMPLFQLLVLCMLASKPI A A RAARELF Sbjct 18 KPEPRVKRLLEVAGTSYAAEAGIRIDDKPMPLFQLLVLCMLASKPIDATIAMRAARELFK 77 Query 74 SGLRTPKAVLSAERQTMISAFGRAHYVRYDESSATRLTAIAHRVRDEYSGDLRELAQRTR 133 +GLRTPK VL + RQTMI AFGRAHYVRYDESSATRLT +A RVRDE+ GDLRE+A+R+ Sbjct 78 AGLRTPKGVLESRRQTMIDAFGRAHYVRYDESSATRLTEMAERVRDEFRGDLREIARRSD 137 Query 134 PDVSAAKRMLKTFNGIGDTGADIFLREVQDVWIWVRPYFDDRATAAAKQLGLPTDPKKLA 193 D S AKR+LK F GIGDTGADIFLREVQDVW W RPYFDDRATA AK+LGLPTDP KL+ Sbjct 138 HDPSKAKRILKQFKGIGDTGADIFLREVQDVWTWARPYFDDRATATAKELGLPTDPAKLS 197 >gi|296164869|ref|ZP_06847425.1| endonuclease III family protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295899711|gb|EFG79161.1| endonuclease III family protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=214 Score = 285 bits (728), Expect = 4e-75, Method: Compositional matrix adjust. Identities = 149/196 (77%), Positives = 171/196 (88%), Gaps = 0/196 (0%) Query 16 EPLARRLLKLAGTTYAAEAGIRIRDKPMPLFQLLVLCMLASKPIGAATAARAARELFCSG 75 E L RRLL +AGTTYAAEA I++ DKPMPLFQLL++CMLASKPI AA A A RELF +G Sbjct 8 ERLVRRLLDVAGTTYAAEARIKLGDKPMPLFQLLIVCMLASKPIDAAIAMAAGRELFKAG 67 Query 76 LRTPKAVLSAERQTMISAFGRAHYVRYDESSATRLTAIAHRVRDEYSGDLRELAQRTRPD 135 LRTPKAVL+A+R+ MI AFGRAHYVRYDESSATRLT +A RVRDEYSGDLRELA+R+R D Sbjct 68 LRTPKAVLAADRRAMIEAFGRAHYVRYDESSATRLTDMAERVRDEYSGDLRELAKRSRHD 127 Query 136 VSAAKRMLKTFNGIGDTGADIFLREVQDVWIWVRPYFDDRATAAAKQLGLPTDPKKLASV 195 V+A KR+L F GIGDTGADI+LREVQDVW WVRPYFDDRATAAA+QLGLPT P+KL ++ Sbjct 128 VAATKRLLTQFKGIGDTGADIYLREVQDVWTWVRPYFDDRATAAAQQLGLPTRPEKLGAL 187 Query 196 APSSNALLAAALVRVA 211 AP +NA LAAAL+RV+ Sbjct 188 APRANARLAAALIRVS 203 >gi|41407679|ref|NP_960515.1| hypothetical protein MAP1581c [Mycobacterium avium subsp. paratuberculosis K-10] gi|41396032|gb|AAS03898.1| hypothetical protein MAP_1581c [Mycobacterium avium subsp. paratuberculosis K-10] Length=222 Score = 284 bits (726), Expect = 7e-75, Method: Compositional matrix adjust. Identities = 143/200 (72%), Positives = 161/200 (81%), Gaps = 0/200 (0%) Query 1 LPPRIAGMRLLVIKPEPLARRLLKLAGTTYAAEAGIRIRDKPMPLFQLLVLCMLASKPIG 60 +P G R + + RRLL +AG TYAA+A I++ DKPMPLFQLLVLCMLASKPI Sbjct 1 MPAHAGGTRTGMSNRDQRVRRLLDVAGQTYAAQARIKLSDKPMPLFQLLVLCMLASKPID 60 Query 61 AATAARAARELFCSGLRTPKAVLSAERQTMISAFGRAHYVRYDESSATRLTAIAHRVRDE 120 AA A AA ELF +GLRTPKAVL A+RQTMI AFGRAHYVRYDESSATRLT +A RVRD+ Sbjct 61 AAIAVGAAAELFKAGLRTPKAVLDADRQTMIDAFGRAHYVRYDESSATRLTDMAERVRDD 120 Query 121 YSGDLRELAQRTRPDVSAAKRMLKTFNGIGDTGADIFLREVQDVWIWVRPYFDDRATAAA 180 YSGDLRELA R+ D ++AKRMLK F GIGDTGADIFLREVQDVW WVRPYFDDRAT AA Sbjct 121 YSGDLRELAARSEHDTASAKRMLKKFKGIGDTGADIFLREVQDVWTWVRPYFDDRATGAA 180 Query 181 KQLGLPTDPKKLASVAPSSN 200 K+LGLP +P KL S+AP +N Sbjct 181 KKLGLPAEPDKLGSLAPQAN 200 >gi|336457518|gb|EGO36524.1| hypothetical protein MAPs_21900 [Mycobacterium avium subsp. paratuberculosis S397] Length=211 Score = 281 bits (718), Expect = 5e-74, Method: Compositional matrix adjust. Identities = 140/181 (78%), Positives = 155/181 (86%), Gaps = 0/181 (0%) Query 20 RRLLKLAGTTYAAEAGIRIRDKPMPLFQLLVLCMLASKPIGAATAARAARELFCSGLRTP 79 RRLL +AG TYAA+A I++ DKPMPLFQLLVLCMLASKPI AA A AA ELF +GLRTP Sbjct 9 RRLLDVAGQTYAAQARIKLSDKPMPLFQLLVLCMLASKPIDAAIAVGAAAELFKAGLRTP 68 Query 80 KAVLSAERQTMISAFGRAHYVRYDESSATRLTAIAHRVRDEYSGDLRELAQRTRPDVSAA 139 KAVL A+RQTMI AFGRAHYVRYDESSATRLT +A RVRD+YSGDLRELA R+ D ++A Sbjct 69 KAVLDADRQTMIDAFGRAHYVRYDESSATRLTDMAERVRDDYSGDLRELAARSEHDTASA 128 Query 140 KRMLKTFNGIGDTGADIFLREVQDVWIWVRPYFDDRATAAAKQLGLPTDPKKLASVAPSS 199 KRMLK F GIGDTGADIFLREVQDVW WVRPYFDDRAT AAK+LGLP +P KL S+AP + Sbjct 129 KRMLKKFKGIGDTGADIFLREVQDVWTWVRPYFDDRATGAAKKLGLPAEPDKLGSLAPQA 188 Query 200 N 200 N Sbjct 189 N 189 >gi|254775323|ref|ZP_05216839.1| hypothetical protein MaviaA2_11716 [Mycobacterium avium subsp. avium ATCC 25291] Length=211 Score = 280 bits (715), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 139/181 (77%), Positives = 155/181 (86%), Gaps = 0/181 (0%) Query 20 RRLLKLAGTTYAAEAGIRIRDKPMPLFQLLVLCMLASKPIGAATAARAARELFCSGLRTP 79 RRLL +AG TYAA+A I++ DKPMPLFQLLVLCMLASKPI AA A AA ELF +GLRTP Sbjct 9 RRLLDVAGQTYAAQARIKLSDKPMPLFQLLVLCMLASKPIDAAIAVGAAAELFKAGLRTP 68 Query 80 KAVLSAERQTMISAFGRAHYVRYDESSATRLTAIAHRVRDEYSGDLRELAQRTRPDVSAA 139 KAVL A+RQTMI AFGRAHYVRYDESSATRLT +A RVRD+YSGDLRELA R+ D ++A Sbjct 69 KAVLDADRQTMIDAFGRAHYVRYDESSATRLTDMAERVRDDYSGDLRELAARSEHDTASA 128 Query 140 KRMLKTFNGIGDTGADIFLREVQDVWIWVRPYFDDRATAAAKQLGLPTDPKKLASVAPSS 199 KRMLK F GIGDTGADIFLREVQDVW WV+PYFDDRAT AAK+LGLP +P KL S+AP + Sbjct 129 KRMLKKFKGIGDTGADIFLREVQDVWTWVQPYFDDRATGAAKKLGLPAEPDKLGSLAPQA 188 Query 200 N 200 N Sbjct 189 N 189 >gi|118463692|ref|YP_882033.1| hypothetical protein MAV_2847 [Mycobacterium avium 104] gi|118164979|gb|ABK65876.1| conserved hypothetical protein [Mycobacterium avium 104] Length=211 Score = 277 bits (709), Expect = 6e-73, Method: Compositional matrix adjust. Identities = 138/181 (77%), Positives = 154/181 (86%), Gaps = 0/181 (0%) Query 20 RRLLKLAGTTYAAEAGIRIRDKPMPLFQLLVLCMLASKPIGAATAARAARELFCSGLRTP 79 RRLL +A TYAA+A I++ DKPMPLFQLLVLCMLASKPI AA A AA ELF +GLRTP Sbjct 9 RRLLDVASQTYAAQARIKLSDKPMPLFQLLVLCMLASKPIDAAIAVGAAAELFKAGLRTP 68 Query 80 KAVLSAERQTMISAFGRAHYVRYDESSATRLTAIAHRVRDEYSGDLRELAQRTRPDVSAA 139 KAVL A+RQTMI AFGRAHYVRYDESSATRLT +A RVRD+YSGDLRELA R+ D ++A Sbjct 69 KAVLDADRQTMIDAFGRAHYVRYDESSATRLTDMAERVRDDYSGDLRELAARSEHDTASA 128 Query 140 KRMLKTFNGIGDTGADIFLREVQDVWIWVRPYFDDRATAAAKQLGLPTDPKKLASVAPSS 199 KRMLK F GIGDTGADIFLREVQDVW WV+PYFDDRAT AAK+LGLP +P KL S+AP + Sbjct 129 KRMLKKFKGIGDTGADIFLREVQDVWTWVQPYFDDRATGAAKKLGLPAEPDKLGSLAPQA 188 Query 200 N 200 N Sbjct 189 N 189 >gi|254819321|ref|ZP_05224322.1| hypothetical protein MintA_05318 [Mycobacterium intracellulare ATCC 13950] Length=208 Score = 275 bits (702), Expect = 4e-72, Method: Compositional matrix adjust. Identities = 136/181 (76%), Positives = 155/181 (86%), Gaps = 0/181 (0%) Query 20 RRLLKLAGTTYAAEAGIRIRDKPMPLFQLLVLCMLASKPIGAATAARAARELFCSGLRTP 79 RRLL +AGTTYAA+A I + DKPMPLFQLLVLCMLASKPI A A AARELF +GLRTP Sbjct 6 RRLLDVAGTTYAAQARITLSDKPMPLFQLLVLCMLASKPIDATIATAAARELFKAGLRTP 65 Query 80 KAVLSAERQTMISAFGRAHYVRYDESSATRLTAIAHRVRDEYSGDLRELAQRTRPDVSAA 139 KAVL+++R+TMI AFGRAHYVRYDESSATRLT +A R+RD+YSGD+RELA R+ DV+ A Sbjct 66 KAVLASDRKTMIDAFGRAHYVRYDESSATRLTDMAERLRDDYSGDMRELADRSGHDVATA 125 Query 140 KRMLKTFNGIGDTGADIFLREVQDVWIWVRPYFDDRATAAAKQLGLPTDPKKLASVAPSS 199 KRMLK F GIGDTGADI+LREVQDVW WVRPYFDDRAT AK+ GLP +PKKL S+AP + Sbjct 126 KRMLKKFKGIGDTGADIYLREVQDVWTWVRPYFDDRATGTAKRFGLPAEPKKLGSLAPQA 185 Query 200 N 200 N Sbjct 186 N 186 >gi|333990597|ref|YP_004523211.1| hypothetical protein JDM601_1957 [Mycobacterium sp. JDM601] gi|333486565|gb|AEF35957.1| conserved hypothetical protein [Mycobacterium sp. JDM601] Length=211 Score = 255 bits (652), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 131/196 (67%), Positives = 152/196 (78%), Gaps = 0/196 (0%) Query 16 EPLARRLLKLAGTTYAAEAGIRIRDKPMPLFQLLVLCMLASKPIGAATAARAARELFCSG 75 + L RRLL+ AG TYA EAGIR+R++PMPLFQLL LCMLASKPI AA AARA+RELF SG Sbjct 5 KELVRRLLRRAGKTYAQEAGIRLRNQPMPLFQLLTLCMLASKPIDAAIAARASRELFRSG 64 Query 76 LRTPKAVLSAERQTMISAFGRAHYVRYDESSATRLTAIAHRVRDEYSGDLRELAQRTRPD 135 LRTP VL A+R+TMI A GRAHY RYDESSATRL IA V+ +Y GDLR LA+R+ + Sbjct 65 LRTPHKVLEADRRTMIEAMGRAHYRRYDESSATRLVEIAEAVQQDYRGDLRLLAERSGRN 124 Query 136 VSAAKRMLKTFNGIGDTGADIFLREVQDVWIWVRPYFDDRATAAAKQLGLPTDPKKLASV 195 V AA ++LK F GIGDTGA IFLREVQDVW W R FDD A AAA+ LGLP DP +L ++ Sbjct 125 VEAAVQLLKGFKGIGDTGASIFLREVQDVWPWARSTFDDLALAAARDLGLPGDPSELGAL 184 Query 196 APSSNALLAAALVRVA 211 + NA LAAALVR + Sbjct 185 SRGRNAELAAALVRYS 200 >gi|119868853|ref|YP_938805.1| hypothetical protein Mkms_2821 [Mycobacterium sp. KMS] gi|119694942|gb|ABL92015.1| conserved hypothetical protein [Mycobacterium sp. KMS] Length=210 Score = 252 bits (644), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 126/180 (70%), Positives = 140/180 (78%), Gaps = 2/180 (1%) Query 21 RLLKLAGTTYAAEAGIRIRDKPMPLFQLLVLCMLASKPIGAATAARAARELFCSGLRTPK 80 RL AG TYAAEAGIR+ DKPMPLFQLLVLCMLASKPI A A RAARELF GLRTP+ Sbjct 10 RLHDQAGQTYAAEAGIRLADKPMPLFQLLVLCMLASKPIDATVAMRAARELFAEGLRTPQ 69 Query 81 AVLSAERQTMISAFGRAHYVRYDESSATRLTAIAHRVRDEYSGDLRELAQRTRPDVSAAK 140 AVL A R+TMI AFGRA Y RYDESSATRL +AH V ++Y GDLR LA+ DV+AA+ Sbjct 70 AVLDANRKTMIDAFGRAGYARYDESSATRLVEMAHAVNNDYGGDLRRLAEAR--DVAAAR 127 Query 141 RMLKTFNGIGDTGADIFLREVQDVWIWVRPYFDDRATAAAKQLGLPTDPKKLASVAPSSN 200 R LK F GIGDTG+DIFLREVQD W W+RPYFD+RATA A +LGLP DP KL +AP Sbjct 128 RKLKQFKGIGDTGSDIFLREVQDTWTWLRPYFDERATATAARLGLPDDPVKLQRLAPDGT 187 >gi|108799743|ref|YP_639940.1| hypothetical protein Mmcs_2777 [Mycobacterium sp. MCS] gi|108770162|gb|ABG08884.1| conserved hypothetical protein [Mycobacterium sp. MCS] Length=234 Score = 251 bits (642), Expect = 4e-65, Method: Compositional matrix adjust. Identities = 126/180 (70%), Positives = 140/180 (78%), Gaps = 2/180 (1%) Query 21 RLLKLAGTTYAAEAGIRIRDKPMPLFQLLVLCMLASKPIGAATAARAARELFCSGLRTPK 80 RL AG TYAAEAGIR+ DKPMPLFQLLVLCMLASKPI A A RAARELF GLRTP+ Sbjct 34 RLHDQAGQTYAAEAGIRLADKPMPLFQLLVLCMLASKPIDATVAMRAARELFAEGLRTPQ 93 Query 81 AVLSAERQTMISAFGRAHYVRYDESSATRLTAIAHRVRDEYSGDLRELAQRTRPDVSAAK 140 AVL A R+TMI AFGRA Y RYDESSATRL +AH V ++Y GDLR LA+ DV+AA+ Sbjct 94 AVLDANRKTMIDAFGRAGYARYDESSATRLVEMAHAVNNDYGGDLRRLAEAR--DVAAAR 151 Query 141 RMLKTFNGIGDTGADIFLREVQDVWIWVRPYFDDRATAAAKQLGLPTDPKKLASVAPSSN 200 R LK F GIGDTG+DIFLREVQD W W+RPYFD+RATA A +LGLP DP KL +AP Sbjct 152 RKLKQFKGIGDTGSDIFLREVQDTWTWLRPYFDERATATAARLGLPDDPVKLQRLAPDGT 211 >gi|126435384|ref|YP_001071075.1| hypothetical protein Mjls_2804 [Mycobacterium sp. JLS] gi|126235184|gb|ABN98584.1| conserved hypothetical protein [Mycobacterium sp. JLS] Length=210 Score = 251 bits (641), Expect = 5e-65, Method: Compositional matrix adjust. Identities = 125/180 (70%), Positives = 139/180 (78%), Gaps = 2/180 (1%) Query 21 RLLKLAGTTYAAEAGIRIRDKPMPLFQLLVLCMLASKPIGAATAARAARELFCSGLRTPK 80 RL AG TYA EAGIR+ DKPMPLFQLLVLCMLASKPI A A RAARELF GLRTP+ Sbjct 10 RLHDQAGQTYAEEAGIRLADKPMPLFQLLVLCMLASKPIDATVAMRAARELFAEGLRTPQ 69 Query 81 AVLSAERQTMISAFGRAHYVRYDESSATRLTAIAHRVRDEYSGDLRELAQRTRPDVSAAK 140 AVL A R+TMI AFGRA Y RYDESSATRL +AH V ++Y GDLR LA+ DV+AA+ Sbjct 70 AVLDANRKTMIDAFGRAGYARYDESSATRLVEMAHAVNNDYGGDLRRLAEAQ--DVAAAR 127 Query 141 RMLKTFNGIGDTGADIFLREVQDVWIWVRPYFDDRATAAAKQLGLPTDPKKLASVAPSSN 200 R LK F GIGDTG+DIFLREVQD W W+RPYFD+RATA A +LGLP DP KL +AP Sbjct 128 RKLKQFKGIGDTGSDIFLREVQDTWTWLRPYFDERATATAARLGLPDDPVKLQRLAPDGT 187 >gi|315444255|ref|YP_004077134.1| hypothetical protein Mspyr1_26680 [Mycobacterium sp. Spyr1] gi|315262558|gb|ADT99299.1| hypothetical protein Mspyr1_26680 [Mycobacterium sp. Spyr1] Length=210 Score = 250 bits (638), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 135/199 (68%), Positives = 149/199 (75%), Gaps = 0/199 (0%) Query 13 IKPEPLARRLLKLAGTTYAAEAGIRIRDKPMPLFQLLVLCMLASKPIGAATAARAARELF 72 + + A RLL+ AGTTYA EAGI + ++PMPLF+LLVLCMLASKPI A A RAARE+F Sbjct 1 MSADDTADRLLREAGTTYAEEAGITLANRPMPLFELLVLCMLASKPIDATVATRAAREIF 60 Query 73 CSGLRTPKAVLSAERQTMISAFGRAHYVRYDESSATRLTAIAHRVRDEYSGDLRELAQRT 132 + LRTP AVL A R TMI AFGRA Y RYDESSATRL IA VRD+Y GDLR LA R Sbjct 61 GAKLRTPDAVLDATRPTMIRAFGRAGYARYDESSATRLVDIAAAVRDDYGGDLRGLADRA 120 Query 133 RPDVSAAKRMLKTFNGIGDTGADIFLREVQDVWIWVRPYFDDRATAAAKQLGLPTDPKKL 192 DV AKR+LK F GIGDTGADIFLREVQDVW WVRPYFD RA AAA LGLP D +L Sbjct 121 EQDVGKAKRLLKRFTGIGDTGADIFLREVQDVWTWVRPYFDARAMAAAADLGLPDDAAEL 180 Query 193 ASVAPSSNALLAAALVRVA 211 A +A A LAAALVRV+ Sbjct 181 ADLARDDCARLAAALVRVS 199 >gi|145223923|ref|YP_001134601.1| hypothetical protein Mflv_3337 [Mycobacterium gilvum PYR-GCK] gi|145216409|gb|ABP45813.1| conserved hypothetical protein [Mycobacterium gilvum PYR-GCK] Length=210 Score = 236 bits (602), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 133/196 (68%), Positives = 150/196 (77%), Gaps = 0/196 (0%) Query 16 EPLARRLLKLAGTTYAAEAGIRIRDKPMPLFQLLVLCMLASKPIGAATAARAARELFCSG 75 + A RLL+ AGTTYA EAGI + ++PMPLF+LLVLCMLASKPI A A RAARE+F + Sbjct 4 DDTADRLLREAGTTYAEEAGITLANRPMPLFELLVLCMLASKPIDATVATRAAREIFGAK 63 Query 76 LRTPKAVLSAERQTMISAFGRAHYVRYDESSATRLTAIAHRVRDEYSGDLRELAQRTRPD 135 LRTP AVL A R TMI AFGRA Y RYDESSATRL IA VRD+Y GDLR LA R D Sbjct 64 LRTPDAVLDATRPTMIRAFGRAGYARYDESSATRLVDIAAAVRDDYGGDLRGLADRAEQD 123 Query 136 VSAAKRMLKTFNGIGDTGADIFLREVQDVWIWVRPYFDDRATAAAKQLGLPTDPKKLASV 195 V+ AK++LK F GIGDTGADIFLREVQDVW WVRPY+D RA AAA LGLP D +LA++ Sbjct 124 VAKAKQLLKRFTGIGDTGADIFLREVQDVWTWVRPYYDARAMAAAADLGLPDDAAELAAL 183 Query 196 APSSNALLAAALVRVA 211 A A LAAALVRV+ Sbjct 184 ARDDCARLAAALVRVS 199 >gi|226359642|ref|YP_002777420.1| hypothetical protein ROP_02280 [Rhodococcus opacus B4] gi|226238127|dbj|BAH48475.1| hypothetical protein [Rhodococcus opacus B4] Length=223 Score = 194 bits (494), Expect = 5e-48, Method: Compositional matrix adjust. Identities = 113/193 (59%), Positives = 135/193 (70%), Gaps = 1/193 (0%) Query 20 RRLLKLAGTTYAAEAGIRIRDKPMPLFQLLVLCMLASKPIGAATAARAARELFCSGLRTP 79 R LL AG TYA+ + I ++D P PLFQLL L +L S I + A AARELF + LR+P Sbjct 20 RMLLDKAGPTYASASHITLKDTPTPLFQLLTLSLLLSTRISSEIAVSAARELFRARLRSP 79 Query 80 KAVLSAERQTMISAFGRAHYVRYDESSATRLTAIAHRVRDEYSGDLRELAQRTRPDVSAA 139 +A+ A+R+T+ISA GR +YVRYDES+ATRL A A RV +EY GDLR LA SAA Sbjct 80 RAMREADRRTVISALGRGNYVRYDESTATRLHAAAVRVDEEYGGDLRRLASACDHATSAA 139 Query 140 KRMLKTFNGIGDTGADIFLREVQDVWIWVRPYFDDRATAAAKQLGLPTDPKKLASVAPSS 199 R+L F+GIG GADIFLREVQDVW WVRPYFD RA +A+ LGLP DP L +AP Sbjct 140 VRLLTEFDGIGPVGADIFLREVQDVWSWVRPYFDTRARESARDLGLPDDPHALYDLAPPG 199 Query 200 N-ALLAAALVRVA 211 A LAAALVRV+ Sbjct 200 RVAELAAALVRVS 212 >gi|343928029|ref|ZP_08767494.1| hypothetical protein GOALK_100_00330 [Gordonia alkanivorans NBRC 16433] gi|343762037|dbj|GAA14420.1| hypothetical protein GOALK_100_00330 [Gordonia alkanivorans NBRC 16433] Length=214 Score = 194 bits (492), Expect = 9e-48, Method: Compositional matrix adjust. Identities = 107/190 (57%), Positives = 132/190 (70%), Gaps = 0/190 (0%) Query 22 LLKLAGTTYAAEAGIRIRDKPMPLFQLLVLCMLASKPIGAATAARAARELFCSGLRTPKA 81 L+ AG TYA +AGI ++D P PLF+LLVL +L S I A A AARELF +G RTP+ Sbjct 13 LMARAGRTYAEDAGIALKDTPSPLFELLVLSLLLSTRISADIAVAAARELFAAGYRTPEK 72 Query 82 VLSAERQTMISAFGRAHYVRYDESSATRLTAIAHRVRDEYSGDLRELAQRTRPDVSAAKR 141 + A Q+++ A GR HY RYDES+ATRL +V D+Y GDLRELA + PD AA + Sbjct 73 MARASWQSLVDALGRGHYKRYDESTATRLGEAGRKVLDDYHGDLRELAAKAEPDSDAAAK 132 Query 142 MLKTFNGIGDTGADIFLREVQDVWIWVRPYFDDRATAAAKQLGLPTDPKKLASVAPSSNA 201 +L+ F GIG GADIFLREVQ VW WV P+FD+RA AAAK LGLP DP +LA +A Sbjct 133 LLQEFTGIGPVGADIFLREVQSVWDWVAPHFDERARAAAKDLGLPDDPGRLADLADGKPE 192 Query 202 LLAAALVRVA 211 +LAAALVR + Sbjct 193 VLAAALVRAS 202 >gi|312139889|ref|YP_004007225.1| hypothetical protein REQ_25050 [Rhodococcus equi 103S] gi|311889228|emb|CBH48542.1| conserved hypothetical protein [Rhodococcus equi 103S] Length=219 Score = 188 bits (477), Expect = 5e-46, Method: Compositional matrix adjust. Identities = 111/194 (58%), Positives = 133/194 (69%), Gaps = 1/194 (0%) Query 18 LARRLLKLAGTTYAAEAGIRIRDKPMPLFQLLVLCMLASKPIGAATAARAARELFCSGLR 77 + R LL AG T+A EA I ++D P PLFQLLVL ML S I AA A RAARELF +G R Sbjct 10 VVRDLLDRAGRTFAEEARITLKDTPKPLFQLLVLSMLLSSRISAAIATRAARELFAAGWR 69 Query 78 TPKAVLSAERQTMISAFGRAHYVRYDESSATRLTAIAHRVRDEYSGDLRELAQRTRPDVS 137 TP + +A R +I+A R Y RYDES+ATRL +AHRV EY GDLRELAQR+ D Sbjct 70 TPDTMEAAPRAEVIAALQRGRYTRYDESTATRLRKMAHRVTVEYRGDLRELAQRSDHDAG 129 Query 138 AAKRMLKTFNGIGDTGADIFLREVQDVWIWVRPYFDDRATAAAKQLGLPTDPKKLASVAP 197 AA R+L+ F+GIG GA+IFLREVQD W W+RP+ DDRA A+ L LP D L ++A Sbjct 130 AAARLLEEFDGIGPVGAEIFLREVQDTWTWLRPHLDDRALDGAEALHLPRDRGGLGALAG 189 Query 198 SSN-ALLAAALVRV 210 + A LAAALVRV Sbjct 190 TRGMAPLAAALVRV 203 >gi|325674232|ref|ZP_08153921.1| endonuclease III family protein [Rhodococcus equi ATCC 33707] gi|325554912|gb|EGD24585.1| endonuclease III family protein [Rhodococcus equi ATCC 33707] Length=219 Score = 188 bits (477), Expect = 6e-46, Method: Compositional matrix adjust. Identities = 110/194 (57%), Positives = 133/194 (69%), Gaps = 1/194 (0%) Query 18 LARRLLKLAGTTYAAEAGIRIRDKPMPLFQLLVLCMLASKPIGAATAARAARELFCSGLR 77 + R LL AG T+A EA I ++D P PLFQLLVL ML S I AA A RAARELF +G R Sbjct 10 VVRDLLDRAGRTFAEEARITLKDTPKPLFQLLVLSMLLSSRISAAIATRAARELFAAGWR 69 Query 78 TPKAVLSAERQTMISAFGRAHYVRYDESSATRLTAIAHRVRDEYSGDLRELAQRTRPDVS 137 TP + +A R +I+A R Y RYDES+ATRL +AHRV EY GDLRELAQR+ D Sbjct 70 TPDTMEAAPRAEVIAALQRGRYTRYDESTATRLRKMAHRVTAEYRGDLRELAQRSDHDAG 129 Query 138 AAKRMLKTFNGIGDTGADIFLREVQDVWIWVRPYFDDRATAAAKQLGLPTDPKKLASVAP 197 AA R+L+ F+GIG GA+IFLRE+QD W W+RP+ DDRA A+ L LP D L ++A Sbjct 130 AAARLLEEFDGIGPVGAEIFLREIQDTWTWLRPHLDDRALDGAEALHLPRDRGGLGALAG 189 Query 198 SSN-ALLAAALVRV 210 + A LAAALVRV Sbjct 190 TRGMAPLAAALVRV 203 >gi|328882550|emb|CCA55789.1| hypothetical protein SVEN_2503 [Streptomyces venezuelae ATCC 10712] Length=214 Score = 173 bits (438), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 101/192 (53%), Positives = 122/192 (64%), Gaps = 1/192 (0%) Query 21 RLLKLAGTTYAAEAGIRIRDKPMPLFQLLVLCMLASKPIGAATAARAARELFCSGLRTPK 80 RLL+ G TYA EAGI + DKP PL+QLLVL +L S I A A AARELF GLRTP Sbjct 9 RLLREHGRTYADEAGIVLHDKPAPLYQLLVLTVLCSVRIRADIATAAARELFSDGLRTPS 68 Query 81 AVLSAERQTMISAFGRAHYVRYDESSATRLTAIAHRVRDEYSGDLRELAQRTRPDVSAAK 140 A+ + Q + A GRAHYVRYDES+AT L A V D Y GDLR+L + D A + Sbjct 69 AMADSSWQQRVDALGRAHYVRYDESTATALGEGARLVLDRYRGDLRQLREEAAGDPDALR 128 Query 141 RMLKTFNGIGDTGADIFLREVQDVWIWVRPYFDDRATAAAKQLGLPTDPKKLA-SVAPSS 199 +L+ IG GA IF RE Q VW +RPYFD+R+ AA +LGLP P LA V P+ Sbjct 129 GLLREVPRIGPVGAGIFCREAQAVWPELRPYFDERSLTAAARLGLPHTPAGLARHVDPAD 188 Query 200 NALLAAALVRVA 211 + LAAAL+RV+ Sbjct 189 LSRLAAALIRVS 200 >gi|256393971|ref|YP_003115535.1| hypothetical protein Caci_4833 [Catenulispora acidiphila DSM 44928] gi|256360197|gb|ACU73694.1| conserved hypothetical protein [Catenulispora acidiphila DSM 44928] Length=207 Score = 172 bits (435), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 100/192 (53%), Positives = 121/192 (64%), Gaps = 1/192 (0%) Query 19 ARRLLKLAGTTYAAEAGIRIRDKPMPLFQLLVLCMLASKPIGAATAARAARELFCSGLRT 78 A RLL G TYA EAGIR+RDKP PL+QLLVL L S I A A AARE+F +G RT Sbjct 13 AERLLAAGGETYAHEAGIRLRDKPSPLYQLLVLSTLLSARITAHIAVDAAREIFTAGWRT 72 Query 79 PKAVLSAERQTMISAFGRAHYVRYDESSATRLTAIAHRVRDEYSGDLRELAQRTRPDVSA 138 P+AV A Q ++ A GRAHY RYDES+AT L A + D + GDLR L + D + Sbjct 73 PRAVADASWQELVDALGRAHYRRYDESTATALHEGAELLIDRWHGDLRRLRKEAGGDPAR 132 Query 139 AKRMLKTFNGIGDTGADIFLREVQDVWIWVRPYFDDRATAAAKQLGLPTDPKKL-ASVAP 197 +++L+ F IG GA+IF RE Q W + P FD RA A++ GLP DP +L ASVAP Sbjct 133 IRQLLQEFPRIGPVGAEIFCREAQGEWEELCPAFDRRALDGAEKNGLPKDPDRLAASVAP 192 Query 198 SSNALLAAALVR 209 LAAALVR Sbjct 193 QDVPRLAAALVR 204 >gi|326333016|ref|ZP_08199272.1| hypothetical protein NBCG_04456 [Nocardioidaceae bacterium Broad-1] gi|325949210|gb|EGD41294.1| hypothetical protein NBCG_04456 [Nocardioidaceae bacterium Broad-1] Length=222 Score = 171 bits (432), Expect = 8e-41, Method: Compositional matrix adjust. Identities = 100/193 (52%), Positives = 120/193 (63%), Gaps = 1/193 (0%) Query 18 LARRLLKLAGTTYAAEAGIRIRDKPMPLFQLLVLCMLASKPIGAATAARAARELFCSGLR 77 L RRLL AGTTY+ EAGIR+RDKP PL++LLVL ML+S I A A AAREL +G R Sbjct 19 LVRRLLDAAGTTYSEEAGIRLRDKPSPLYRLLVLAMLSSTRITADIAVAAARELSAAGWR 78 Query 78 TPKAVLSAERQTMISAFGRAHYVRYDESSATRLTAIAHRVRDEYSGDLRELAQRTRPDVS 137 TP +L + Q + A GRAHY RYDES+AT+L A + D + GDLR L +R D Sbjct 79 TPHRLLDSTWQQRVDALGRAHYRRYDESTATKLEEQAQWLLDTHRGDLRRLRPTSRDDAD 138 Query 138 AAKRMLKTFNGIGDTGADIFLREVQDVWIWVRPYFDDRATAAAKQLGLPTDPKKLASVAP 197 A L + IG GA IF REVQDVW + P+ D A +LGLP DP +LAS+ P Sbjct 139 ALIDALTSSPRIGPVGARIFCREVQDVWPALSPFLDGPLLEQAGELGLPEDPDELASLVP 198 Query 198 SSN-ALLAAALVR 209 A LAAAL R Sbjct 199 DGRCAPLAAALTR 211 >gi|291299531|ref|YP_003510809.1| hypothetical protein Snas_2021 [Stackebrandtia nassauensis DSM 44728] gi|290568751|gb|ADD41716.1| conserved hypothetical protein [Stackebrandtia nassauensis DSM 44728] Length=210 Score = 170 bits (431), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 96/195 (50%), Positives = 118/195 (61%), Gaps = 2/195 (1%) Query 18 LARRLLKLAGTTYAAEAGIRIRDKPMPLFQLLVLCMLASKPIGAATAARAARELFCSGLR 77 + R L++ GTTYA +AGI +RD P PL+QLL+L L S IG+ A AA+ELF SG R Sbjct 7 VVRGLIERHGTTYAEQAGINLRDTPAPLYQLLMLSTLLSARIGSDIAVAAAKELFTSGYR 66 Query 78 TPKAVLSAERQTMISAFGRAHYVRYDESSATRLTAIAHRVRDEYSGDLRELAQRTRPDVS 137 TPKA+ A Q + A GR HY RYDE ++T L A D + GDLR L D+S Sbjct 67 TPKAMREASWQDRVDALGRGHYRRYDEKTSTMLGDGAQLALDRWKGDLRRLHTEA-DDLS 125 Query 138 AAKRMLKTFNGIGDTGADIFLREVQDVWIWVRPYFDDRATAAAKQLGLPTDPKKLAS-VA 196 R+L+ F GIG TGA IF REVQ VW + PY D+R A +LGLPTD +LA V Sbjct 126 DVTRLLREFPGIGSTGASIFCREVQGVWTDLAPYVDERTAKGADKLGLPTDANELAKLVK 185 Query 197 PSSNALLAAALVRVA 211 P+ L A VRVA Sbjct 186 PADFPRLVAGCVRVA 200 >gi|297563725|ref|YP_003682699.1| endonuclease III-like protein [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296848173|gb|ADH70193.1| endonuclease III-like protein [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length=215 Score = 164 bits (416), Expect = 6e-39, Method: Compositional matrix adjust. Identities = 98/195 (51%), Positives = 122/195 (63%), Gaps = 1/195 (0%) Query 18 LARRLLKLAGTTYAAEAGIRIRDKPMPLFQLLVLCMLASKPIGAATAARAARELFCSGLR 77 +AR ++ AGTT AAEAG+R+ D+P L+QLLVL L S I A A AAREL +G Sbjct 7 VARAVVDEAGTTLAAEAGLRMADRPSALWQLLVLVNLLSARISARIAIAAARELNEAGGT 66 Query 78 TPKAVLSAERQTMISAFGRAHYVRYDESSATRLTAIAHRVRDEYSGDLRELAQRTRPDVS 137 TP + S Q + A GR HYVRYDES+ATRL RVR+EY GDLR L +R+ S Sbjct 67 TPDGMASLSWQDRVDALGRGHYVRYDESTATRLGECVDRVREEYQGDLRRLGERSEHRAS 126 Query 138 AAKRMLKTFNGIGDTGADIFLREVQDVWIWVRPYFDDRATAAAKQLGLPTDPKKLASVAP 197 + M++ F+GIG TGA +F REVQ VW W+RPY D AK++GLP D KLA + Sbjct 127 RVEAMVREFSGIGPTGAVMFCREVQAVWPWLRPYTDKYVLGGAKKVGLPEDGGKLAKLVE 186 Query 198 SSN-ALLAAALVRVA 211 A LAA L R+A Sbjct 187 GDEVARLAAGLARIA 201 >gi|159038109|ref|YP_001537362.1| hypothetical protein Sare_2528 [Salinispora arenicola CNS-205] gi|157916944|gb|ABV98371.1| conserved hypothetical protein [Salinispora arenicola CNS-205] Length=216 Score = 163 bits (412), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 98/194 (51%), Positives = 124/194 (64%), Gaps = 1/194 (0%) Query 19 ARRLLKLAGTTYAAEAGIRIRDKPMPLFQLLVLCMLASKPIGAATAARAARELFCSGLRT 78 A+ LL+ G TY EAGIR+ D+P PL+QLLVL L S I A A AARELF +G RT Sbjct 8 AQALLERQGQTYTEEAGIRLADRPGPLYQLLVLATLLSTRIRAGVAVAAARELFAAGYRT 67 Query 79 PKAVLSAERQTMISAFGRAHYVRYDESSATRLTAIAHRVRDEYSGDLRELAQRTRPDVSA 138 P A+ +A Q + A GR HY RYDE +AT L A D + GDLR L + + + Sbjct 68 PSAMEAASWQDRVDALGRGHYRRYDERTATILGTGARLCLDRWHGDLRRLHREAQGQPAQ 127 Query 139 AKRMLKTFNGIGDTGADIFLREVQDVWIWVRPYFDDRATAAAKQLGLPTDPKKLAS-VAP 197 +R+L +F GIG TGADI+LREVQ VW +RPY D R + A++LGLP P++LAS VA Sbjct 128 LRRLLTSFPGIGPTGADIYLREVQAVWPDLRPYADRRTLSGAERLGLPKTPQRLASLVAE 187 Query 198 SSNALLAAALVRVA 211 + A+ALVRVA Sbjct 188 AEFGRFASALVRVA 201 >gi|145594918|ref|YP_001159215.1| hypothetical protein Strop_2390 [Salinispora tropica CNB-440] gi|145304255|gb|ABP54837.1| hypothetical protein Strop_2390 [Salinispora tropica CNB-440] Length=286 Score = 160 bits (405), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 101/206 (50%), Positives = 124/206 (61%), Gaps = 1/206 (0%) Query 7 GMRLLVIKPEPLARRLLKLAGTTYAAEAGIRIRDKPMPLFQLLVLCMLASKPIGAATAAR 66 G LV AR LL+ G TY EAGIR+ D+P PL+QLLVL L S I A A Sbjct 66 GYAPLVGDNHETARVLLERRGQTYTEEAGIRLADRPGPLYQLLVLATLLSSRIRAGVAVA 125 Query 67 AARELFCSGLRTPKAVLSAERQTMISAFGRAHYVRYDESSATRLTAIAHRVRDEYSGDLR 126 AARELF +G RTP A+ +A Q + A GR HY RYDE +AT L A D + GDLR Sbjct 126 AARELFAAGYRTPSAMEAATWQDRVDALGRGHYRRYDERTATLLGTGARLCLDRWQGDLR 185 Query 127 ELAQRTRPDVSAAKRMLKTFNGIGDTGADIFLREVQDVWIWVRPYFDDRATAAAKQLGLP 186 L + + +R+L F GIG TGADIFLRE Q VW +RP+ D R + A++LGLP Sbjct 186 RLHHAAQGRPTQLRRLLTAFPGIGPTGADIFLREAQAVWPDLRPFADRRTLSGAERLGLP 245 Query 187 TDPKKLAS-VAPSSNALLAAALVRVA 211 P++LAS VA + A+ALVRVA Sbjct 246 QTPRRLASLVAEAEFGRFASALVRVA 271 >gi|117165263|emb|CAJ88824.1| putative endonuclease III-like protein [Streptomyces ambofaciens ATCC 23877] Length=216 Score = 159 bits (403), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 86/186 (47%), Positives = 115/186 (62%), Gaps = 0/186 (0%) Query 15 PEPLARRLLKLAGTTYAAEAGIRIRDKPMPLFQLLVLCMLASKPIGAATAARAARELFCS 74 P + R LL G TYA EAGIR+RD P PL++LLVL L S I + A AR L + Sbjct 5 PGRVLRELLDAHGRTYAEEAGIRLRDTPQPLYRLLVLAHLLSARIRGSIAVATARALHEA 64 Query 75 GLRTPKAVLSAERQTMISAFGRAHYVRYDESSATRLTAIAHRVRDEYSGDLRELAQRTRP 134 GLR P+ + A+ Q + A GR Y RYDE +AT+L A + + + GDLR L ++ Sbjct 65 GLRDPRRMAGADWQERVDALGRGGYRRYDERTATQLGDAAELLTERWGGDLRRLREQADG 124 Query 135 DVSAAKRMLKTFNGIGDTGADIFLREVQDVWIWVRPYFDDRATAAAKQLGLPTDPKKLAS 194 +V +R+L+ F GIG TGADIFLREVQ VW + PY D +A A++LGLP DP +L Sbjct 125 EVPETRRLLQEFPGIGPTGADIFLREVQRVWPGIAPYLDRKALQGAQRLGLPDDPGRLLE 184 Query 195 VAPSSN 200 +A S++ Sbjct 185 LAGSTD 190 >gi|302526875|ref|ZP_07279217.1| conserved hypothetical protein [Streptomyces sp. AA4] gi|302435770|gb|EFL07586.1| conserved hypothetical protein [Streptomyces sp. AA4] Length=200 Score = 159 bits (403), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 99/189 (53%), Positives = 120/189 (64%), Gaps = 1/189 (0%) Query 22 LLKLAGTTYAAEAGIRIRDKPMPLFQLLVLCMLASKPIGAATAARAARELFCSGLRTPKA 81 LL GTT+A EAGI++ DKP PL++LLVL L S I A A AAREL SG RTP A Sbjct 7 LLAEHGTTFAEEAGIKLADKPQPLYRLLVLATLLSTRISADIAVAAARELSRSGWRTPAA 66 Query 82 VLSAERQTMISAFGRAHYVRYDESSATRLTAIAHRVRDEYSGDLRELAQRTRPDVSAAKR 141 + + Q + A GRAHYVRYDES++ L A A +RD Y DLR +A D ++ Sbjct 67 MRDSTWQQRVDALGRAHYVRYDESTSQHLGAGAEFIRDRYRDDLRRMADDADGDPRRLEK 126 Query 142 MLKTFNGIGDTGADIFLREVQDVWIWVRPYFDDRATAAAKQLGLPTDPKKLASVAPSSN- 200 +L F IG TGA IF RE Q VW W+RPYFD +A AK+ GLPTDP +LA + P + Sbjct 127 LLAEFPRIGPTGAQIFCREAQAVWPWLRPYFDRKALDGAKKAGLPTDPDRLAKLVPGEDS 186 Query 201 ALLAAALVR 209 A LAAALVR Sbjct 187 ARLAAALVR 195 >gi|29828148|ref|NP_822782.1| endonuclease III-like protein [Streptomyces avermitilis MA-4680] gi|29605250|dbj|BAC69317.1| putative endonuclease III-like protein [Streptomyces avermitilis MA-4680] Length=215 Score = 159 bits (402), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 88/191 (47%), Positives = 121/191 (64%), Gaps = 1/191 (0%) Query 22 LLKLAGTTYAAEAGIRIRDKPMPLFQLLVLCMLASKPIGAATAARAARELFCSGLRTPKA 81 L+ GTTYA EAGIR++D P PL++LLV+ L S I ++ A A R L+ +GLR P+ Sbjct 11 LIAAHGTTYADEAGIRLKDAPQPLYRLLVMACLLSARIRSSVALAATRALYDAGLRDPRR 70 Query 82 VLSAERQTMISAFGRAHYVRYDESSATRLTAIAHRVRDEYSGDLRELAQRTRPDVSAAKR 141 + A+ Q + A GR Y RYDE +AT+L A + + + GDLR + V +R Sbjct 71 MAEADWQERVDALGRGGYRRYDERTATQLGEGAELLIERWGGDLRRMRDEADGKVPELRR 130 Query 142 MLKTFNGIGDTGADIFLREVQDVWIWVRPYFDDRATAAAKQLGLPTDPKKLASVAPSSN- 200 +L+ G+G GADIFLREVQ VW V P+ D++A + A++LGLP DP+KL A + Sbjct 131 LLREIPGMGPAGADIFLREVQHVWPGVAPHLDNKALSGAERLGLPKDPRKLMERAGDTEP 190 Query 201 ALLAAALVRVA 211 A+LAAALVRVA Sbjct 191 AVLAAALVRVA 201 >gi|302541039|ref|ZP_07293381.1| conserved hypothetical protein [Streptomyces hygroscopicus ATCC 53653] gi|302458657|gb|EFL21750.1| conserved hypothetical protein [Streptomyces himastatinicus ATCC 53653] Length=212 Score = 154 bits (390), Expect = 6e-36, Method: Compositional matrix adjust. Identities = 91/199 (46%), Positives = 115/199 (58%), Gaps = 6/199 (3%) Query 14 KPEPLARRLLKLAGTTYAAEAGIRIRDKPMPLFQLLVLCMLASKPIGAATAARAARELFC 73 K + R LL GTTYAAEAGI +R+ P PL+QLLVL L S I A A +AR LF Sbjct 6 KNTSVVRSLLDQQGTTYAAEAGITLRNTPGPLYQLLVLAHLLSARIKADIAVASARALFD 65 Query 74 SGLRTPKAVLSAERQTMISAFGRAHYVRYDESSATRLTAIAHRVRDEYSGDLRELAQRTR 133 +G+R P+ + A Q + A G Y RYDE +AT+L A VR EY GDLR + + Sbjct 66 AGMRDPRTMADATWQQRVDALGEGGYRRYDERTATQLGEAAELVRREYQGDLRRMREAGD 125 Query 134 PDVSAAKRMLKTFNGIGDTGADIFLREVQDVWIWVRPYFDDRATAAAKQLGLPTDPKKLA 193 P +++L+ GIG G DIFLRE Q VW PYFD +A A+++GLP L Sbjct 126 P-----RKLLREITGIGPAGVDIFLREAQGVWPEFAPYFDRKALEGAERVGLPKTAASLE 180 Query 194 SVAPSSN-ALLAAALVRVA 211 + P + LAAALVRVA Sbjct 181 KLVPGKDLPRLAAALVRVA 199 >gi|302562117|ref|ZP_07314459.1| conserved hypothetical protein [Streptomyces griseoflavus Tu4000] gi|302479735|gb|EFL42828.1| conserved hypothetical protein [Streptomyces griseoflavus Tu4000] Length=218 Score = 154 bits (388), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 88/191 (47%), Positives = 115/191 (61%), Gaps = 1/191 (0%) Query 22 LLKLAGTTYAAEAGIRIRDKPMPLFQLLVLCMLASKPIGAATAARAARELFCSGLRTPKA 81 L+ G TYA EAGI +RD P PL++LLVL L S I + A AAR L +GLR P+ Sbjct 12 LVGAHGRTYAEEAGITLRDTPQPLYRLLVLAHLLSARIRGSIAVAAARALHEAGLRDPRR 71 Query 82 VLSAERQTMISAFGRAHYVRYDESSATRLTAIAHRVRDEYSGDLRELAQRTRPDVSAAKR 141 + A Q + A GR Y RYDE +AT+L A + + + GDLR L + D +R Sbjct 72 MAGARWQERVDALGRGGYRRYDERTATQLGEAAELLNERWGGDLRRLRREADGDTGELRR 131 Query 142 MLKTFNGIGDTGADIFLREVQDVWIWVRPYFDDRATAAAKQLGLPTDPKKLASVAPSSN- 200 +L+ F G+G GADIFLREVQ VW P D +A A++LGLP DP++L +A + Sbjct 132 LLQEFPGMGPAGADIFLREVQRVWPETSPRLDAKALQGAERLGLPKDPERLLGLAGRTEP 191 Query 201 ALLAAALVRVA 211 A+LAAALVR A Sbjct 192 AVLAAALVRSA 202 >gi|269125834|ref|YP_003299204.1| hypothetical protein Tcur_1590 [Thermomonospora curvata DSM 43183] gi|268310792|gb|ACY97166.1| conserved hypothetical protein [Thermomonospora curvata DSM 43183] Length=212 Score = 152 bits (384), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 89/196 (46%), Positives = 124/196 (64%), Gaps = 1/196 (0%) Query 16 EPLARRLLKLAGTTYAAEAGIRIRDKPMPLFQLLVLCMLASKPIGAATAARAARELFCSG 75 + + ++LL+ AG TYA EAG+ ++D+P LF+LLVL L S I A A +ARELF +G Sbjct 2 DAVVKKLLREAGRTYAEEAGVVVKDQPPALFKLLVLSSLLSSRIPADIAVASARELFAAG 61 Query 76 LRTPKAVLSAERQTMISAFGRAHYVRYDESSATRLTAIAHRVRDEYSGDLRELAQRTRPD 135 T + + Q ++ A GR +R+DES+ TRL+ A + +Y GDLR LA+ + D Sbjct 62 GGTARGLARMSWQDLVDALGRDRCMRHDESAPTRLSDTAELAQHKYDGDLRRLARDSGRD 121 Query 136 VSAAKRMLKTFNGIGDTGADIFLREVQDVWIWVRPYFDDRATAAAKQLGLPTDPKKLASV 195 A +L+ F G G G D F RE Q +W W+RPYFD++A A A++LGLPTDPK+LA + Sbjct 122 RVRAAELLQEFPGFGPAGVDAFCREAQAIWPWLRPYFDEQARAGAERLGLPTDPKRLADL 181 Query 196 APSSN-ALLAAALVRV 210 P + A A ALVRV Sbjct 182 VPDKDLARFAVALVRV 197 >gi|320006885|gb|ADW01735.1| hypothetical protein Sfla_0267 [Streptomyces flavogriseus ATCC 33331] Length=204 Score = 152 bits (383), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 99/191 (52%), Positives = 118/191 (62%), Gaps = 1/191 (0%) Query 22 LLKLAGTTYAAEAGIRIRDKPMPLFQLLVLCMLASKPIGAATAARAARELFCSGLRTPKA 81 LL+ GTTYAAEAGIR+RD P PL+QLLVL L S I A A AAR LF GLRTP+ Sbjct 10 LLERHGTTYAAEAGIRLRDTPQPLYQLLVLSDLLSARIRAGIAVAAARALFSRGLRTPRR 69 Query 82 VLSAERQTMISAFGRAHYVRYDESSATRLTAIAHRVRDEYSGDLRELAQRTRPDVSAAKR 141 + A Q + A G Y RYDE +AT+L A + D + GDLR L + DV A + Sbjct 70 MADATWQERVDALGEGGYRRYDERTATQLGDGALLLLDAFGGDLRRLRREAGGDVHALRS 129 Query 142 MLKTFNGIGDTGADIFLREVQDVWIWVRPYFDDRATAAAKQLGLPTDPKKLASVAPSSN- 200 L+ F GIG TGADIFLREVQ VW PY D +A A++LGLP P L +A + Sbjct 130 GLRRFPGIGPTGADIFLREVQTVWPETAPYLDKKALQGAERLGLPGTPAALTRLARDEDP 189 Query 201 ALLAAALVRVA 211 A+LAAALVR A Sbjct 190 AVLAAALVRGA 200 >gi|345010736|ref|YP_004813090.1| endonuclease III-like protein [Streptomyces violaceusniger Tu 4113] gi|344037085|gb|AEM82810.1| endonuclease III-like protein [Streptomyces violaceusniger Tu 4113] Length=210 Score = 152 bits (383), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 91/197 (47%), Positives = 114/197 (58%), Gaps = 6/197 (3%) Query 16 EPLARRLLKLAGTTYAAEAGIRIRDKPMPLFQLLVLCMLASKPIGAATAARAARELFCSG 75 E +AR LL GTT+A +AGI++RD P PL+QLLVL L S I + A AAR LF +G Sbjct 6 ESVARSLLDQQGTTFATQAGIKLRDTPGPLYQLLVLAHLLSARISSDIAVAAARALFDAG 65 Query 76 LRTPKAVLSAERQTMISAFGRAHYVRYDESSATRLTAIAHRVRDEYSGDLRELAQRTRPD 135 +R P+ + A Q + A G Y RYDE +AT+L A V EY GDLR + + P Sbjct 66 MRDPRRMAEATWQQRVDALGEGGYRRYDERTATQLGEAAELVNREYGGDLRRMREAGDP- 124 Query 136 VSAAKRMLKTFNGIGDTGADIFLREVQDVWIWVRPYFDDRATAAAKQLGLPTDPKKLAS- 194 K++L GIG G +IFLREVQ VW PYFD +A A+++GLP L Sbjct 125 ----KKLLPEIKGIGPAGVNIFLREVQGVWPEFAPYFDRKALEGAERVGLPKSAGALGRL 180 Query 195 VAPSSNALLAAALVRVA 211 VA LAAALVRVA Sbjct 181 VAEKDLPRLAAALVRVA 197 >gi|337769409|emb|CCB78122.1| conserved protein of unknown function [Streptomyces cattleya NRRL 8057] Length=220 Score = 150 bits (380), Expect = 8e-35, Method: Compositional matrix adjust. Identities = 91/193 (48%), Positives = 117/193 (61%), Gaps = 1/193 (0%) Query 20 RRLLKLAGTTYAAEAGIRIRDKPMPLFQLLVLCMLASKPIGAATAARAARELFCSGLRTP 79 R LL G TYA EAGI ++D P PL+QL+VL L S I A A AAR LF +GL P Sbjct 12 RALLDEHGRTYAEEAGIHLKDTPQPLYQLVVLATLLSARIKAQVATAAARALFEAGLGDP 71 Query 80 KAVLSAERQTMISAFGRAHYVRYDESSATRLTAIAHRVRDEYSGDLRELAQRTRPDVSAA 139 + + A+ Q + A G HY RYDE +AT+L A + D Y GD+R + Q + D A Sbjct 72 RRMADADWQRRVDALGEGHYRRYDERTATQLGEGAALLLDRYGGDVRRMRQASDGDPDAL 131 Query 140 KRMLKTFNGIGDTGADIFLREVQDVWIWVRPYFDDRATAAAKQLGLPTDPKKLASVAPSS 199 +R L+ GIG GADIF+RE Q +W P+FDD+A A ++GLPT P++LA +A Sbjct 132 RRSLREVPGIGPVGADIFIREAQSLWPEFGPFFDDKAVRGAGRVGLPTSPEELAHLAGRE 191 Query 200 N-ALLAAALVRVA 211 A LAAALVR A Sbjct 192 RWAALAAALVRSA 204 >gi|134096776|ref|YP_001102437.1| endonuclease III-like protein [Saccharopolyspora erythraea NRRL 2338] gi|291005180|ref|ZP_06563153.1| endonuclease III-like protein [Saccharopolyspora erythraea NRRL 2338] gi|133909399|emb|CAL99511.1| endonuclease III-like protein [Saccharopolyspora erythraea NRRL 2338] Length=209 Score = 148 bits (374), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 89/181 (50%), Positives = 111/181 (62%), Gaps = 2/181 (1%) Query 20 RRLLKLAGTTYAAEAGIRIRDKPMPLFQLLVLCMLASKPIGAATAARAARELFCSGLRTP 79 R LL AGTTYA EAGI++ DKP PL++LLVL +L S I A A AAREL G TP Sbjct 8 RDLLDRAGTTYAEEAGIKLEDKPAPLYRLLVLSVLLSTRIKAGIAVSAARELAEFG--TP 65 Query 80 KAVLSAERQTMISAFGRAHYVRYDESSATRLTAIAHRVRDEYSGDLRELAQRTRPDVSAA 139 + + A Q + A GR HYVRYDES+AT L A + D Y GDLR+L + A Sbjct 66 QKMRDATWQQRVDALGRGHYVRYDESTATSLGDGAEYLLDRYRGDLRKLRDEAGGGIKAL 125 Query 140 KRMLKTFNGIGDTGADIFLREVQDVWIWVRPYFDDRATAAAKQLGLPTDPKKLASVAPSS 199 K L+ G+G GADIF RE Q VW +RPYFD +A + AK++GLP D K+LA + Sbjct 126 KSKLQEVKGLGPVGADIFCREAQAVWPELRPYFDKKALSGAKKVGLPEDAKRLAELVGDK 185 Query 200 N 200 + Sbjct 186 D 186 >gi|291435768|ref|ZP_06575158.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672] gi|291338663|gb|EFE65619.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672] Length=217 Score = 148 bits (374), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 81/183 (45%), Positives = 110/183 (61%), Gaps = 0/183 (0%) Query 14 KPEPLARRLLKLAGTTYAAEAGIRIRDKPMPLFQLLVLCMLASKPIGAATAARAARELFC 73 + E + R L+ G TYA EAGIR+RD P PL++LLVL L S I + A AR L Sbjct 4 RDERVVRALVDAHGRTYAEEAGIRLRDTPQPLYRLLVLAHLLSARIRGSIAVATARALHE 63 Query 74 SGLRTPKAVLSAERQTMISAFGRAHYVRYDESSATRLTAIAHRVRDEYSGDLRELAQRTR 133 +GLR P+ + +A+ Q + A GR Y RYDE +AT+L A + + + GDLR L + Sbjct 64 AGLRDPRRMAAADWQERVDALGRGGYRRYDERTATQLGEEAELLIERWGGDLRGLREEAG 123 Query 134 PDVSAAKRMLKTFNGIGDTGADIFLREVQDVWIWVRPYFDDRATAAAKQLGLPTDPKKLA 193 +V +R+L+ F G+G GADIFLREVQ VW PY D +A A++L LP DP +L Sbjct 124 GEVPELRRLLQVFPGVGPAGADIFLREVQRVWPGTAPYLDAKALQGARRLELPQDPNRLT 183 Query 194 SVA 196 +A Sbjct 184 GLA 186 >gi|302555579|ref|ZP_07307921.1| conserved hypothetical protein [Streptomyces viridochromogenes DSM 40736] gi|302473197|gb|EFL36290.1| conserved hypothetical protein [Streptomyces viridochromogenes DSM 40736] Length=215 Score = 147 bits (371), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 81/185 (44%), Positives = 109/185 (59%), Gaps = 0/185 (0%) Query 16 EPLARRLLKLAGTTYAAEAGIRIRDKPMPLFQLLVLCMLASKPIGAATAARAARELFCSG 75 E + R L+ G T+A EAGIR+RD P PL++LLVL L S I + A AR L +G Sbjct 5 ERVVRELVGAHGRTFADEAGIRLRDTPQPLYRLLVLSHLLSARIRGSIALATARALHEAG 64 Query 76 LRTPKAVLSAERQTMISAFGRAHYVRYDESSATRLTAIAHRVRDEYSGDLRELAQRTRPD 135 LR P+ + A Q + A GR Y RYDE +AT+L A + D + GDLR L + Sbjct 65 LRDPRRMAEASWQERVDALGRGGYRRYDERTATQLGEEAELLTDRWGGDLRRLRREADGK 124 Query 136 VSAAKRMLKTFNGIGDTGADIFLREVQDVWIWVRPYFDDRATAAAKQLGLPTDPKKLASV 195 VS + +L+ F G+G G+DIFLRE Q VW PY D +A A++L LP DP+ LA + Sbjct 125 VSELRHLLQDFPGMGPAGSDIFLREAQGVWPEAAPYLDAKALQGAERLNLPKDPEHLADL 184 Query 196 APSSN 200 A S++ Sbjct 185 AGSTD 189 >gi|297196328|ref|ZP_06913726.1| conserved hypothetical protein [Streptomyces pristinaespiralis ATCC 25486] gi|297153169|gb|EFH32182.1| conserved hypothetical protein [Streptomyces pristinaespiralis ATCC 25486] Length=224 Score = 146 bits (369), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 89/191 (47%), Positives = 118/191 (62%), Gaps = 1/191 (0%) Query 22 LLKLAGTTYAAEAGIRIRDKPMPLFQLLVLCMLASKPIGAATAARAARELFCSGLRTPKA 81 LL+ G TYA EAGI +RD P PL++LLVL L S I A+ A AAREL +G+R+P+A Sbjct 19 LLEDHGRTYAEEAGITLRDTPQPLYRLLVLAHLLSARIRASVAVAAARELSDAGMRSPEA 78 Query 82 VLSAERQTMISAFGRAHYVRYDESSATRLTAIAHRVRDEYSGDLRELAQRTRPDVSAAKR 141 + A Q + A GR Y RYDE +AT+L A + + Y GDLR + ++ DV +R Sbjct 79 MKKASWQERVDALGRGGYRRYDERTATQLGDGAELLTERYGGDLRRMRKQADGDVDELRR 138 Query 142 MLKTFNGIGDTGADIFLREVQDVWIWVRPYFDDRATAAAKQLGLPTDPKKLASVAPSSNA 201 +L+ GIG GADIFLREVQ VW P D++A A++LG+ DP L +A ++A Sbjct 139 LLREVPGIGPAGADIFLREVQAVWPEAGPLLDEKALQGARRLGVADDPGTLLGLAGDADA 198 Query 202 L-LAAALVRVA 211 LAA LVR A Sbjct 199 AHLAAGLVRAA 209 >gi|345003861|ref|YP_004806715.1| hypothetical protein SACTE_6405 [Streptomyces sp. SirexAA-E] gi|344319487|gb|AEN14175.1| conserved hypothetical protein [Streptomyces sp. SirexAA-E] Length=213 Score = 145 bits (367), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 85/175 (49%), Positives = 105/175 (60%), Gaps = 0/175 (0%) Query 22 LLKLAGTTYAAEAGIRIRDKPMPLFQLLVLCMLASKPIGAATAARAARELFCSGLRTPKA 81 LL+ GTTYA EAGIR+RD P PL+QLLVL L S I A+ A +AR LF G+R+P+ Sbjct 10 LLEEHGTTYAEEAGIRLRDTPQPLYQLLVLSHLLSARIRASVAVASARALFSHGMRSPRR 69 Query 82 VLSAERQTMISAFGRAHYVRYDESSATRLTAIAHRVRDEYSGDLRELAQRTRPDVSAAKR 141 + A Q + A G Y RYDE +AT+L A + D Y GDLR L D A + Sbjct 70 MADATWQQRVDALGEGGYRRYDERTATQLGDGAELLLDAYGGDLRRLRGDADGDTDALRS 129 Query 142 MLKTFNGIGDTGADIFLREVQDVWIWVRPYFDDRATAAAKQLGLPTDPKKLASVA 196 L+ F G+G GADIFLREVQ VW PY D +A A++LGLPT P L +A Sbjct 130 GLRRFPGMGPAGADIFLREVQAVWPEAAPYLDSKALQGAERLGLPTSPTGLRRLA 184 >gi|257067724|ref|YP_003153979.1| hypothetical protein Bfae_05210 [Brachybacterium faecium DSM 4810] gi|256558542|gb|ACU84389.1| hypothetical protein Bfae_05210 [Brachybacterium faecium DSM 4810] Length=215 Score = 143 bits (361), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 94/194 (49%), Positives = 117/194 (61%), Gaps = 0/194 (0%) Query 18 LARRLLKLAGTTYAAEAGIRIRDKPMPLFQLLVLCMLASKPIGAATAARAARELFCSGLR 77 LA RLL G T+AA+A I +RDKP PL+QLLVL +L S I + A ARELF +G R Sbjct 7 LAHRLLTAHGRTFAADAAITLRDKPAPLWQLLVLSLLLSTRISSDIAVATARELFSAGWR 66 Query 78 TPKAVLSAERQTMISAFGRAHYVRYDESSATRLTAIAHRVRDEYSGDLRELAQRTRPDVS 137 TP + + Q + A GR Y RYDES+ATRL A + D + GDLR L D Sbjct 67 TPGHLRESTWQERVDALGRGGYRRYDESTATRLDDAAALLLDRWKGDLRRLRDEAESDPR 126 Query 138 AAKRMLKTFNGIGDTGADIFLREVQDVWIWVRPYFDDRATAAAKQLGLPTDPKKLASVAP 197 +L+TF+GIG TGA IFLREVQ VW VRP+ D+ A+ GLP D + LA + Sbjct 127 RIAELLQTFDGIGPTGASIFLREVQQVWPTVRPFADELVLKGARAAGLPQDAESLAGLVD 186 Query 198 SSNALLAAALVRVA 211 A LA+ALVR+A Sbjct 187 DDFASLASALVRIA 200 >gi|302867699|ref|YP_003836336.1| hypothetical protein Micau_3231 [Micromonospora aurantiaca ATCC 27029] gi|315505900|ref|YP_004084787.1| hypothetical protein ML5_5163 [Micromonospora sp. L5] gi|302570558|gb|ADL46760.1| hypothetical protein Micau_3231 [Micromonospora aurantiaca ATCC 27029] gi|315412519|gb|ADU10636.1| hypothetical protein ML5_5163 [Micromonospora sp. L5] Length=218 Score = 142 bits (359), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 99/195 (51%), Positives = 120/195 (62%), Gaps = 1/195 (0%) Query 18 LARRLLKLAGTTYAAEAGIRIRDKPMPLFQLLVLCMLASKPIGAATAARAARELFCSGLR 77 +AR LL+ TYA EAGI + D+P PL+QLLVL L S I A+ A AARELF +G R Sbjct 7 VARALLERQNRTYAEEAGIALADRPGPLYQLLVLTTLLSTRIRASVAVAAARELFAAGYR 66 Query 78 TPKAVLSAERQTMISAFGRAHYVRYDESSATRLTAIAHRVRDEYSGDLRELAQRTRPDVS 137 TP+A+ +A Q + A GR HY RYDE +AT L A D + GDLR L + D + Sbjct 67 TPQAMEAASWQDRVDALGRGHYRRYDERTATMLGTGARLCLDRWHGDLRRLHKEAGADRA 126 Query 138 AAKRMLKTFNGIGDTGADIFLREVQDVWIWVRPYFDDRATAAAKQLGLPTDPKKLAS-VA 196 +R+L F GIG TGADIFLRE Q VW VRPY D R A A++LGLP P L V Sbjct 127 VLRRLLTEFPGIGPTGADIFLREAQSVWPDVRPYADRRTLAGARRLGLPASPGDLVGLVG 186 Query 197 PSSNALLAAALVRVA 211 + LA+ALVRVA Sbjct 187 EADFGRLASALVRVA 201 >gi|330468131|ref|YP_004405874.1| hypothetical protein VAB18032_20870 [Verrucosispora maris AB-18-032] gi|328811102|gb|AEB45274.1| hypothetical protein VAB18032_20870 [Verrucosispora maris AB-18-032] Length=215 Score = 138 bits (347), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 95/184 (52%), Positives = 113/184 (62%), Gaps = 1/184 (0%) Query 29 TYAAEAGIRIRDKPMPLFQLLVLCMLASKPIGAATAARAARELFCSGLRTPKAVLSAERQ 88 TYA EAGI + D+P PL+QLLVL L S I A A AARELF +G RT A+ +A Q Sbjct 16 TYAEEAGISLADRPAPLYQLLVLVTLLSTRIRAQVAVAAARELFAAGYRTAAAMEAASWQ 75 Query 89 TMISAFGRAHYVRYDESSATRLTAIAHRVRDEYSGDLRELAQRTRPDVSAAKRMLKTFNG 148 + A GR HY RYDE +AT L A D + GDLR L ++ D +R+L F G Sbjct 76 QRVDALGRGHYRRYDERTATMLGTGARLCLDRWHGDLRRLRRQADGDQDQLRRLLVEFPG 135 Query 149 IGDTGADIFLREVQDVWIWVRPYFDDRATAAAKQLGLPTDPKKLASVAPSSN-ALLAAAL 207 IG TGADIFLREVQ VW +RPY D RA A AK+LGLP +LA + LA+AL Sbjct 136 IGPTGADIFLREVQTVWPELRPYADRRAVAGAKRLGLPAATDRLAGLVDEGEFGRLASAL 195 Query 208 VRVA 211 VRVA Sbjct 196 VRVA 199 >gi|182434279|ref|YP_001821998.1| hypothetical protein SGR_486 [Streptomyces griseus subsp. griseus NBRC 13350] gi|178462795|dbj|BAG17315.1| conserved hypothetical protein [Streptomyces griseus subsp. griseus NBRC 13350] Length=223 Score = 137 bits (346), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 85/183 (47%), Positives = 102/183 (56%), Gaps = 8/183 (4%) Query 22 LLKLAGTTYAAEAGIRIRDKPMPLFQLLVLCMLASKPIGAATAARAARELFCSGLRTPKA 81 LL G TYA EAGIR+RD P PL++LLVL L S I A+ A AAR LF GLRTP+ Sbjct 16 LLDGYGRTYAQEAGIRLRDTPQPLYRLLVLSHLLSARIRASIAVSAARALFADGLRTPRR 75 Query 82 VLSAERQTMISAFGRAHYVRYDESSATRLTAIAHRVRDEYSGDLRELAQRTRPDVSAAKR 141 + A Q + A G Y RYDE ++T+L A V D + GDLR L A Sbjct 76 MAGASWQQRVDALGEGGYRRYDERTSTQLGEGARLVLDVWKGDLRRLRAEADGSADAVCD 135 Query 142 MLKTFNGIGDTGADIFLREVQDVWIWVRPYFDDRATA----AAKQLGLPTDPKKLASVAP 197 L+ GIG GADIF+REVQD+W P RA A A++LGLPT P LA +AP Sbjct 136 GLQRVRGIGPAGADIFVREVQDLW----PETGFRAGAKGLRGAEKLGLPTSPGALARLAP 191 Query 198 SSN 200 Sbjct 192 DGG 194 Lambda K H 0.323 0.135 0.389 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 249157747332 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40