BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv1874 Length=228 Score E Sequences producing significant alignments: (Bits) Value gi|148823085|ref|YP_001287839.1| hypothetical protein TBFG_11902... 463 9e-129 gi|15841343|ref|NP_336380.1| hypothetical protein MT1923 [Mycoba... 462 2e-128 gi|31793064|ref|NP_855557.1| hypothetical protein Mb1905 [Mycoba... 462 2e-128 gi|289443351|ref|ZP_06433095.1| hypothetical protein TBLG_00453 ... 460 6e-128 gi|339631927|ref|YP_004723569.1| hypothetical protein MAF_18960 ... 460 7e-128 gi|298525366|ref|ZP_07012775.1| conserved hypothetical protein [... 460 9e-128 gi|342861214|ref|ZP_08717862.1| hypothetical protein MCOL_20121 ... 376 2e-102 gi|254819311|ref|ZP_05224312.1| hypothetical protein MintA_05268... 372 2e-101 gi|240170515|ref|ZP_04749174.1| hypothetical protein MkanA1_1447... 353 1e-95 gi|296164880|ref|ZP_06847436.1| conserved hypothetical protein [... 351 6e-95 gi|183982763|ref|YP_001851054.1| hypothetical protein MMAR_2757 ... 347 1e-93 gi|118618389|ref|YP_906721.1| hypothetical protein MUL_2997 [Myc... 345 4e-93 gi|118462683|ref|YP_882024.1| hypothetical protein MAV_2837 [Myc... 341 5e-92 gi|41407689|ref|NP_960525.1| hypothetical protein MAP1591 [Mycob... 337 1e-90 gi|254775313|ref|ZP_05216829.1| hypothetical protein MaviaA2_116... 335 4e-90 gi|145223912|ref|YP_001134590.1| hypothetical protein Mflv_3326 ... 290 1e-76 gi|126435371|ref|YP_001071062.1| hypothetical protein Mjls_2791 ... 288 4e-76 gi|333992316|ref|YP_004524930.1| hypothetical protein JDM601_367... 281 4e-74 gi|118472568|ref|YP_887872.1| hypothetical protein MSMEG_3569 [M... 280 1e-73 gi|108799727|ref|YP_639924.1| hypothetical protein Mmcs_2761 [My... 278 3e-73 gi|120404026|ref|YP_953855.1| hypothetical protein Mvan_3047 [My... 278 4e-73 gi|169630940|ref|YP_001704589.1| hypothetical protein MAB_3861 [... 194 7e-48 gi|311744293|ref|ZP_07718097.1| conserved hypothetical protein [... 161 8e-38 gi|262203564|ref|YP_003274772.1| hypothetical protein Gbro_3695 ... 160 2e-37 gi|343928669|ref|ZP_08768114.1| hypothetical protein GOALK_120_0... 154 1e-35 gi|170701882|ref|ZP_02892810.1| conserved hypothetical protein [... 140 1e-31 gi|78062355|ref|YP_372263.1| hypothetical protein Bcep18194_B150... 140 2e-31 gi|325522215|gb|EGD00855.1| hypothetical protein B1M_29490 [Burk... 139 2e-31 gi|206563436|ref|YP_002234199.1| hypothetical protein BCAM1587 [... 136 3e-30 gi|116694604|ref|YP_728815.1| hypothetical protein H16_B0653 [Ra... 135 3e-30 gi|54024952|ref|YP_119194.1| hypothetical protein nfa29830 [Noca... 135 6e-30 gi|319949556|ref|ZP_08023603.1| hypothetical protein ES5_08886 [... 129 2e-28 gi|73541246|ref|YP_295766.1| hypothetical protein Reut_A1556 [Ra... 129 5e-28 gi|339321917|ref|YP_004680811.1| hypothetical protein CNE_2c0600... 128 5e-28 gi|119717942|ref|YP_924907.1| hypothetical protein Noca_3720 [No... 124 1e-26 gi|172063365|ref|YP_001811016.1| hypothetical protein BamMC406_4... 119 5e-25 gi|148556229|ref|YP_001263811.1| hypothetical protein Swit_3327 ... 113 2e-23 gi|264678160|ref|YP_003278067.1| hypothetical protein CtCNB1_202... 106 2e-21 gi|334145049|ref|YP_004538258.1| hypothetical protein PP1Y_Mpl34... 103 2e-20 gi|146275887|ref|YP_001166047.1| hypothetical protein Saro_3662 ... 90.1 2e-16 gi|339328461|ref|YP_004688153.1| hypothetical protein CNE_BB1p06... 85.9 4e-15 gi|240168708|ref|ZP_04747367.1| hypothetical protein MkanA1_0530... 80.9 1e-13 gi|329897250|ref|ZP_08271989.1| hypothetical protein IMCC3088_26... 79.0 5e-13 gi|40062880|gb|AAR37751.1| hypothetical protein MBMO_EBAC000-63A... 60.8 2e-07 gi|119504179|ref|ZP_01626260.1| hypothetical protein MGP2080_105... 60.5 2e-07 gi|326385020|ref|ZP_08206692.1| hypothetical protein SCNU_18853 ... 44.3 0.012 gi|322368548|ref|ZP_08043116.1| Ethyl tert-butyl ether degradati... 37.4 1.7 gi|124268002|ref|YP_001022006.1| HupK protein [Methylibium petro... 36.2 3.4 gi|157869289|ref|XP_001683196.1| hypothetical protein [Leishmani... 35.0 8.1 gi|162448386|ref|YP_001610753.1| amidase [Sorangium cellulosum '... 35.0 8.2 >gi|148823085|ref|YP_001287839.1| hypothetical protein TBFG_11902 [Mycobacterium tuberculosis F11] gi|167970356|ref|ZP_02552633.1| hypothetical protein MtubH3_20938 [Mycobacterium tuberculosis H37Ra] gi|253799082|ref|YP_003032083.1| hypothetical protein TBMG_02120 [Mycobacterium tuberculosis KZN 1435] 43 more sequence titles Length=234 Score = 463 bits (1191), Expect = 9e-129, Method: Compositional matrix adjust. Identities = 228/228 (100%), Positives = 228/228 (100%), Gaps = 0/228 (0%) Query 1 VLMRPEPDDDWCARQRAQVADALLGLGVAGLSINVRDSTVRDSLMTLTTLYPPVAAVVSL 60 VLMRPEPDDDWCARQRAQVADALLGLGVAGLSINVRDSTVRDSLMTLTTLYPPVAAVVSL Sbjct 7 VLMRPEPDDDWCARQRAQVADALLGLGVAGLSINVRDSTVRDSLMTLTTLYPPVAAVVSL 66 Query 61 WTQQCYGEQVAAALRLLAQECDELGAYLVTESVPLTFPSLVESGSRTPGLANIALLRRPD 120 WTQQCYGEQVAAALRLLAQECDELGAYLVTESVPLTFPSLVESGSRTPGLANIALLRRPD Sbjct 67 WTQQCYGEQVAAALRLLAQECDELGAYLVTESVPLTFPSLVESGSRTPGLANIALLRRPD 126 Query 121 GLDQATWLTRWQRDHTQVAIEAQATFGYTQNWVVRALTPEAPGIAGIVEELFPVAATTDL 180 GLDQATWLTRWQRDHTQVAIEAQATFGYTQNWVVRALTPEAPGIAGIVEELFPVAATTDL Sbjct 127 GLDQATWLTRWQRDHTQVAIEAQATFGYTQNWVVRALTPEAPGIAGIVEELFPVAATTDL 186 Query 181 KAFFGAADDNDLRNRISRMVASTSAFGANQNIDTVPTSRYVFRTPFKD 228 KAFFGAADDNDLRNRISRMVASTSAFGANQNIDTVPTSRYVFRTPFKD Sbjct 187 KAFFGAADDNDLRNRISRMVASTSAFGANQNIDTVPTSRYVFRTPFKD 234 >gi|15841343|ref|NP_336380.1| hypothetical protein MT1923 [Mycobacterium tuberculosis CDC1551] gi|13881576|gb|AAK46194.1| hypothetical protein MT1923 [Mycobacterium tuberculosis CDC1551] gi|323719615|gb|EGB28738.1| hypothetical protein TMMG_01131 [Mycobacterium tuberculosis CDC1551A] Length=234 Score = 462 bits (1189), Expect = 2e-128, Method: Compositional matrix adjust. Identities = 227/228 (99%), Positives = 228/228 (100%), Gaps = 0/228 (0%) Query 1 VLMRPEPDDDWCARQRAQVADALLGLGVAGLSINVRDSTVRDSLMTLTTLYPPVAAVVSL 60 VLMRPEPDDDWCARQRAQVADALLGLGVAGLSINVRDSTVRDSLMTLTTLYPPVAAVVSL Sbjct 7 VLMRPEPDDDWCARQRAQVADALLGLGVAGLSINVRDSTVRDSLMTLTTLYPPVAAVVSL 66 Query 61 WTQQCYGEQVAAALRLLAQECDELGAYLVTESVPLTFPSLVESGSRTPGLANIALLRRPD 120 WTQQCYGEQVAAALRLLAQECDELGAYLVTESVPLTFPSLVESGSRTPGLANIALLRRPD Sbjct 67 WTQQCYGEQVAAALRLLAQECDELGAYLVTESVPLTFPSLVESGSRTPGLANIALLRRPD 126 Query 121 GLDQATWLTRWQRDHTQVAIEAQATFGYTQNWVVRALTPEAPGIAGIVEELFPVAATTDL 180 GLDQATWLTRWQRDHTQVAIEAQATFGYTQNWVVRALTPEAPGIAGIVEELFPVAATTDL Sbjct 127 GLDQATWLTRWQRDHTQVAIEAQATFGYTQNWVVRALTPEAPGIAGIVEELFPVAATTDL 186 Query 181 KAFFGAADDNDLRNRISRMVASTSAFGANQNIDTVPTSRYVFRTPFKD 228 KAFFGAADDNDLRNRISRMVASTSAFGANQNIDTVP+SRYVFRTPFKD Sbjct 187 KAFFGAADDNDLRNRISRMVASTSAFGANQNIDTVPSSRYVFRTPFKD 234 >gi|31793064|ref|NP_855557.1| hypothetical protein Mb1905 [Mycobacterium bovis AF2122/97] gi|121637777|ref|YP_978000.1| hypothetical protein BCG_1910 [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148661680|ref|YP_001283203.1| hypothetical protein MRA_1885 [Mycobacterium tuberculosis H37Ra] 21 more sequence titles Length=228 Score = 462 bits (1188), Expect = 2e-128, Method: Compositional matrix adjust. Identities = 227/228 (99%), Positives = 228/228 (100%), Gaps = 0/228 (0%) Query 1 VLMRPEPDDDWCARQRAQVADALLGLGVAGLSINVRDSTVRDSLMTLTTLYPPVAAVVSL 60 +LMRPEPDDDWCARQRAQVADALLGLGVAGLSINVRDSTVRDSLMTLTTLYPPVAAVVSL Sbjct 1 MLMRPEPDDDWCARQRAQVADALLGLGVAGLSINVRDSTVRDSLMTLTTLYPPVAAVVSL 60 Query 61 WTQQCYGEQVAAALRLLAQECDELGAYLVTESVPLTFPSLVESGSRTPGLANIALLRRPD 120 WTQQCYGEQVAAALRLLAQECDELGAYLVTESVPLTFPSLVESGSRTPGLANIALLRRPD Sbjct 61 WTQQCYGEQVAAALRLLAQECDELGAYLVTESVPLTFPSLVESGSRTPGLANIALLRRPD 120 Query 121 GLDQATWLTRWQRDHTQVAIEAQATFGYTQNWVVRALTPEAPGIAGIVEELFPVAATTDL 180 GLDQATWLTRWQRDHTQVAIEAQATFGYTQNWVVRALTPEAPGIAGIVEELFPVAATTDL Sbjct 121 GLDQATWLTRWQRDHTQVAIEAQATFGYTQNWVVRALTPEAPGIAGIVEELFPVAATTDL 180 Query 181 KAFFGAADDNDLRNRISRMVASTSAFGANQNIDTVPTSRYVFRTPFKD 228 KAFFGAADDNDLRNRISRMVASTSAFGANQNIDTVPTSRYVFRTPFKD Sbjct 181 KAFFGAADDNDLRNRISRMVASTSAFGANQNIDTVPTSRYVFRTPFKD 228 >gi|289443351|ref|ZP_06433095.1| hypothetical protein TBLG_00453 [Mycobacterium tuberculosis T46] gi|289569951|ref|ZP_06450178.1| hypothetical protein TBJG_00318 [Mycobacterium tuberculosis T17] gi|289750454|ref|ZP_06509832.1| hypothetical protein TBDG_00664 [Mycobacterium tuberculosis T92] gi|289416270|gb|EFD13510.1| hypothetical protein TBLG_00453 [Mycobacterium tuberculosis T46] gi|289543705|gb|EFD47353.1| hypothetical protein TBJG_00318 [Mycobacterium tuberculosis T17] gi|289691041|gb|EFD58470.1| hypothetical protein TBDG_00664 [Mycobacterium tuberculosis T92] Length=228 Score = 460 bits (1184), Expect = 6e-128, Method: Compositional matrix adjust. Identities = 226/228 (99%), Positives = 228/228 (100%), Gaps = 0/228 (0%) Query 1 VLMRPEPDDDWCARQRAQVADALLGLGVAGLSINVRDSTVRDSLMTLTTLYPPVAAVVSL 60 +LMRPEPDDDWCARQRAQVADALLGLGVAGLSINVRDSTVRDSLMTLTTLYPPVAAVVSL Sbjct 1 MLMRPEPDDDWCARQRAQVADALLGLGVAGLSINVRDSTVRDSLMTLTTLYPPVAAVVSL 60 Query 61 WTQQCYGEQVAAALRLLAQECDELGAYLVTESVPLTFPSLVESGSRTPGLANIALLRRPD 120 WTQQCYGEQVAAALRLLAQECDELGAYLVTESVPLTFPSLV+SGSRTPGLANIALLRRPD Sbjct 61 WTQQCYGEQVAAALRLLAQECDELGAYLVTESVPLTFPSLVKSGSRTPGLANIALLRRPD 120 Query 121 GLDQATWLTRWQRDHTQVAIEAQATFGYTQNWVVRALTPEAPGIAGIVEELFPVAATTDL 180 GLDQATWLTRWQRDHTQVAIEAQATFGYTQNWVVRALTPEAPGIAGIVEELFPVAATTDL Sbjct 121 GLDQATWLTRWQRDHTQVAIEAQATFGYTQNWVVRALTPEAPGIAGIVEELFPVAATTDL 180 Query 181 KAFFGAADDNDLRNRISRMVASTSAFGANQNIDTVPTSRYVFRTPFKD 228 KAFFGAADDNDLRNRISRMVASTSAFGANQNIDTVPTSRYVFRTPFKD Sbjct 181 KAFFGAADDNDLRNRISRMVASTSAFGANQNIDTVPTSRYVFRTPFKD 228 >gi|339631927|ref|YP_004723569.1| hypothetical protein MAF_18960 [Mycobacterium africanum GM041182] gi|339331283|emb|CCC26966.1| hypothetical protein MAF_18960 [Mycobacterium africanum GM041182] Length=228 Score = 460 bits (1183), Expect = 7e-128, Method: Compositional matrix adjust. Identities = 226/228 (99%), Positives = 228/228 (100%), Gaps = 0/228 (0%) Query 1 VLMRPEPDDDWCARQRAQVADALLGLGVAGLSINVRDSTVRDSLMTLTTLYPPVAAVVSL 60 +LMRPEPDDDWCARQRAQVADALLGLGVAGLSINVRDSTVRDSLMTLTTLYPPVAAVVSL Sbjct 1 MLMRPEPDDDWCARQRAQVADALLGLGVAGLSINVRDSTVRDSLMTLTTLYPPVAAVVSL 60 Query 61 WTQQCYGEQVAAALRLLAQECDELGAYLVTESVPLTFPSLVESGSRTPGLANIALLRRPD 120 WTQQCYGEQVAAALRLLAQECDELGAYLVTESVPLTFPSLVESGSRTPGLANIALLRRPD Sbjct 61 WTQQCYGEQVAAALRLLAQECDELGAYLVTESVPLTFPSLVESGSRTPGLANIALLRRPD 120 Query 121 GLDQATWLTRWQRDHTQVAIEAQATFGYTQNWVVRALTPEAPGIAGIVEELFPVAATTDL 180 GLDQATWLTRWQRDHTQVAIEAQATFGYTQNWVV+ALTPEAPGIAGIVEELFPVAATTDL Sbjct 121 GLDQATWLTRWQRDHTQVAIEAQATFGYTQNWVVQALTPEAPGIAGIVEELFPVAATTDL 180 Query 181 KAFFGAADDNDLRNRISRMVASTSAFGANQNIDTVPTSRYVFRTPFKD 228 KAFFGAADDNDLRNRISRMVASTSAFGANQNIDTVPTSRYVFRTPFKD Sbjct 181 KAFFGAADDNDLRNRISRMVASTSAFGANQNIDTVPTSRYVFRTPFKD 228 >gi|298525366|ref|ZP_07012775.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] gi|298495160|gb|EFI30454.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] Length=228 Score = 460 bits (1183), Expect = 9e-128, Method: Compositional matrix adjust. Identities = 226/228 (99%), Positives = 227/228 (99%), Gaps = 0/228 (0%) Query 1 VLMRPEPDDDWCARQRAQVADALLGLGVAGLSINVRDSTVRDSLMTLTTLYPPVAAVVSL 60 +LMRPEPDDDWCARQRAQVADALLGLGVAGLSINVRDSTVRDSLMTLTTLYPPVA VVSL Sbjct 1 MLMRPEPDDDWCARQRAQVADALLGLGVAGLSINVRDSTVRDSLMTLTTLYPPVAVVVSL 60 Query 61 WTQQCYGEQVAAALRLLAQECDELGAYLVTESVPLTFPSLVESGSRTPGLANIALLRRPD 120 WTQQCYGEQVAAALRLLAQECDELGAYLVTESVPLTFPSLVESGSRTPGLANIALLRRPD Sbjct 61 WTQQCYGEQVAAALRLLAQECDELGAYLVTESVPLTFPSLVESGSRTPGLANIALLRRPD 120 Query 121 GLDQATWLTRWQRDHTQVAIEAQATFGYTQNWVVRALTPEAPGIAGIVEELFPVAATTDL 180 GLDQATWLTRWQRDHTQVAIEAQATFGYTQNWVVRALTPEAPGIAGIVEELFPVAATTDL Sbjct 121 GLDQATWLTRWQRDHTQVAIEAQATFGYTQNWVVRALTPEAPGIAGIVEELFPVAATTDL 180 Query 181 KAFFGAADDNDLRNRISRMVASTSAFGANQNIDTVPTSRYVFRTPFKD 228 KAFFGAADDNDLRNRISRMVASTSAFGANQNIDTVPTSRYVFRTPFKD Sbjct 181 KAFFGAADDNDLRNRISRMVASTSAFGANQNIDTVPTSRYVFRTPFKD 228 >gi|342861214|ref|ZP_08717862.1| hypothetical protein MCOL_20121 [Mycobacterium colombiense CECT 3035] gi|342131114|gb|EGT84395.1| hypothetical protein MCOL_20121 [Mycobacterium colombiense CECT 3035] Length=227 Score = 376 bits (965), Expect = 2e-102, Method: Compositional matrix adjust. Identities = 184/228 (81%), Positives = 201/228 (89%), Gaps = 1/228 (0%) Query 1 VLMRPEPDDDWCARQRAQVADALLGLGVAGLSINVRDSTVRDSLMTLTTLYPPVAAVVSL 60 +L RPEPDD WCARQRA VADALL LGVAGL INVRD VR SLMTLTTL PPVAAVVS+ Sbjct 1 MLRRPEPDDAWCARQRAHVADALLQLGVAGLQINVRDGAVRHSLMTLTTLDPPVAAVVSM 60 Query 61 WTQQCYGEQVAAALRLLAQECDELGAYLVTESVPLTFPSLVESGSRTPGLANIALLRRPD 120 WTQQCYG+Q AAL+ LAQEC++L AYLVTESVPLT P VESGSRTPGLANIALLRRP Sbjct 61 WTQQCYGDQTTAALKFLAQECEQLAAYLVTESVPLTAPP-VESGSRTPGLANIALLRRPA 119 Query 121 GLDQATWLTRWQRDHTQVAIEAQATFGYTQNWVVRALTPEAPGIAGIVEELFPVAATTDL 180 +DQATWL RWQRDHT VAI+ Q+TFGYTQNWVVRALT +APGIAGIVEELFP+ ATTDL Sbjct 120 EMDQATWLNRWQRDHTSVAIDTQSTFGYTQNWVVRALTDDAPGIAGIVEELFPIEATTDL 179 Query 181 KAFFGAADDNDLRNRISRMVASTSAFGANQNIDTVPTSRYVFRTPFKD 228 AFFGAADD DL++R+ RMVAST+AFGAN+NIDTVPTSRYVF TPF+D Sbjct 180 HAFFGAADDGDLQDRLGRMVASTTAFGANENIDTVPTSRYVFETPFRD 227 >gi|254819311|ref|ZP_05224312.1| hypothetical protein MintA_05268 [Mycobacterium intracellulare ATCC 13950] Length=233 Score = 372 bits (955), Expect = 2e-101, Method: Compositional matrix adjust. Identities = 182/228 (80%), Positives = 201/228 (89%), Gaps = 1/228 (0%) Query 1 VLMRPEPDDDWCARQRAQVADALLGLGVAGLSINVRDSTVRDSLMTLTTLYPPVAAVVSL 60 VLMR + DDDWCARQR VADALL LGV GLS+NVRD VR SLMTLTTL PPVAAVVS+ Sbjct 7 VLMRADSDDDWCARQRGPVADALLELGVPGLSVNVRDDAVRQSLMTLTTLDPPVAAVVSM 66 Query 61 WTQQCYGEQVAAALRLLAQECDELGAYLVTESVPLTFPSLVESGSRTPGLANIALLRRPD 120 WTQQCYGEQ+ +AL LLA+EC++L AYLVTESVPL+ P+ VE GSRTPGLANIALLRRP Sbjct 67 WTQQCYGEQMTSALELLAKECEQLAAYLVTESVPLSAPA-VEFGSRTPGLANIALLRRPA 125 Query 121 GLDQATWLTRWQRDHTQVAIEAQATFGYTQNWVVRALTPEAPGIAGIVEELFPVAATTDL 180 G+DQATWLTRWQRDHT VAIE Q+TFGYTQNWVVRALT +APGIAGIVEELFP A TDL Sbjct 126 GMDQATWLTRWQRDHTPVAIETQSTFGYTQNWVVRALTEDAPGIAGIVEELFPAEAITDL 185 Query 181 KAFFGAADDNDLRNRISRMVASTSAFGANQNIDTVPTSRYVFRTPFKD 228 +AFFGAADDNDL++R+ RMVAST+AFGAN+NIDTVPTSRYV TPF D Sbjct 186 QAFFGAADDNDLQHRLGRMVASTTAFGANENIDTVPTSRYVISTPFTD 233 >gi|240170515|ref|ZP_04749174.1| hypothetical protein MkanA1_14475 [Mycobacterium kansasii ATCC 12478] Length=233 Score = 353 bits (905), Expect = 1e-95, Method: Compositional matrix adjust. Identities = 172/226 (77%), Positives = 194/226 (86%), Gaps = 1/226 (0%) Query 1 VLMRPEPDDDWCARQRAQVADALLGLGVAGLSINVRDSTVRDSLMTLTTLYPPVAAVVSL 60 VL+R EPDDDWCARQ VADAL+ LG+ GL++NVRD VR SLMTLTTL PPVA+VVS+ Sbjct 7 VLLRDEPDDDWCARQLGPVADALVELGLPGLAVNVRDGAVRSSLMTLTTLSPPVASVVSM 66 Query 61 WTQQCYGEQVAAALRLLAQECDELGAYLVTESVPLTFPSLVESGSRTPGLANIALLRRPD 120 WTQQCYG+Q+A+AL+LL +EC +LGAYLVTESVP+ P E GSRT GLANIALLRRP Sbjct 67 WTQQCYGDQIASALQLLERECAQLGAYLVTESVPMASPE-TEPGSRTTGLANIALLRRPA 125 Query 121 GLDQATWLTRWQRDHTQVAIEAQATFGYTQNWVVRALTPEAPGIAGIVEELFPVAATTDL 180 GLD+ TWLTRWQRDHT VAIE QATFGYTQNWVVR LT AP I+GIVEELFP A +DL Sbjct 126 GLDEETWLTRWQRDHTSVAIETQATFGYTQNWVVRTLTASAPPISGIVEELFPAEAVSDL 185 Query 181 KAFFGAADDNDLRNRISRMVASTSAFGANQNIDTVPTSRYVFRTPF 226 +AFFGAADD DL++RISRMVAST+AFGAN+NIDTVPTSRYVF TPF Sbjct 186 QAFFGAADDADLQHRISRMVASTNAFGANKNIDTVPTSRYVFTTPF 231 >gi|296164880|ref|ZP_06847436.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295899722|gb|EFG79172.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=236 Score = 351 bits (900), Expect = 6e-95, Method: Compositional matrix adjust. Identities = 179/228 (79%), Positives = 198/228 (87%), Gaps = 1/228 (0%) Query 1 VLMRPEPDDDWCARQRAQVADALLGLGVAGLSINVRDSTVRDSLMTLTTLYPPVAAVVSL 60 VLMR + D+ WCARQR VADALL LG+ GLS+NVRD VR SLMTLTTL PPVAAVVS+ Sbjct 7 VLMRADSDEQWCARQRGPVADALLELGLPGLSVNVRDDAVRHSLMTLTTLDPPVAAVVSM 66 Query 61 WTQQCYGEQVAAALRLLAQECDELGAYLVTESVPLTFPSLVESGSRTPGLANIALLRRPD 120 WTQQCYGEQ+AAAL LL ECD+L AYLVTESVPL P + E+GSRT GLANIALLRRP Sbjct 67 WTQQCYGEQMAAALALLEAECDQLAAYLVTESVPLK-PPVTEAGSRTAGLANIALLRRPA 125 Query 121 GLDQATWLTRWQRDHTQVAIEAQATFGYTQNWVVRALTPEAPGIAGIVEELFPVAATTDL 180 GLDQA+WLTRWQRDHT VAIE Q+TFGYTQNWVVR LTP+APGIAGIVEELFP A TDL Sbjct 126 GLDQASWLTRWQRDHTPVAIETQSTFGYTQNWVVRTLTPDAPGIAGIVEELFPQEAITDL 185 Query 181 KAFFGAADDNDLRNRISRMVASTSAFGANQNIDTVPTSRYVFRTPFKD 228 KAFFGAADD+DL++R+ RMVAST+AFGAN+NIDTVPTSRYVF TPF + Sbjct 186 KAFFGAADDDDLQHRLGRMVASTTAFGANENIDTVPTSRYVFTTPFSE 233 >gi|183982763|ref|YP_001851054.1| hypothetical protein MMAR_2757 [Mycobacterium marinum M] gi|183176089|gb|ACC41199.1| conserved hypothetical protein [Mycobacterium marinum M] Length=237 Score = 347 bits (889), Expect = 1e-93, Method: Compositional matrix adjust. Identities = 169/226 (75%), Positives = 190/226 (85%), Gaps = 1/226 (0%) Query 1 VLMRPEPDDDWCARQRAQVADALLGLGVAGLSINVRDSTVRDSLMTLTTLYPPVAAVVSL 60 VLM +P + WCARQR VA++LL LG+ GLS+NVRD V +SLMTLTTL PPVAAVVS+ Sbjct 7 VLMHTDPSEQWCARQRGPVAESLLALGLPGLSVNVRDGAVCESLMTLTTLDPPVAAVVSV 66 Query 61 WTQQCYGEQVAAALRLLAQECDELGAYLVTESVPLTFPSLVESGSRTPGLANIALLRRPD 120 WTQQCYG+QVA ALRLL EC LGAYLVTESVPL P V+ GSRTPGLANIALLRRP Sbjct 67 WTQQCYGDQVAEALRLLGAECQSLGAYLVTESVPLVAPR-VQPGSRTPGLANIALLRRPA 125 Query 121 GLDQATWLTRWQRDHTQVAIEAQATFGYTQNWVVRALTPEAPGIAGIVEELFPVAATTDL 180 LD+ TWL RWQ DHT VAIE Q+TFGYTQNWVVR LTP AP +A IVEELFP+AA TDL Sbjct 126 ALDEPTWLARWQHDHTPVAIETQSTFGYTQNWVVRTLTPGAPEVAAIVEELFPMAAITDL 185 Query 181 KAFFGAADDNDLRNRISRMVASTSAFGANQNIDTVPTSRYVFRTPF 226 KAFFGA+DD DL++R+ RMVAST+AFGAN+NIDTVPTSRYVF+TPF Sbjct 186 KAFFGASDDGDLQHRLGRMVASTAAFGANENIDTVPTSRYVFKTPF 231 >gi|118618389|ref|YP_906721.1| hypothetical protein MUL_2997 [Mycobacterium ulcerans Agy99] gi|118570499|gb|ABL05250.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99] Length=237 Score = 345 bits (884), Expect = 4e-93, Method: Compositional matrix adjust. Identities = 168/226 (75%), Positives = 189/226 (84%), Gaps = 1/226 (0%) Query 1 VLMRPEPDDDWCARQRAQVADALLGLGVAGLSINVRDSTVRDSLMTLTTLYPPVAAVVSL 60 VLM +P + WCARQR VA++LL LG+ GLS+NVRD V +SLMTLTTL PPVAAVVS+ Sbjct 7 VLMHTDPSEQWCARQRGPVAESLLALGLPGLSVNVRDGAVCESLMTLTTLDPPVAAVVSV 66 Query 61 WTQQCYGEQVAAALRLLAQECDELGAYLVTESVPLTFPSLVESGSRTPGLANIALLRRPD 120 WTQQCYG+QVA ALRLL EC LGAYLVTESVPL P V+ GSRTPGLANIALLRRP Sbjct 67 WTQQCYGDQVAEALRLLGAECQSLGAYLVTESVPLVAPR-VQPGSRTPGLANIALLRRPA 125 Query 121 GLDQATWLTRWQRDHTQVAIEAQATFGYTQNWVVRALTPEAPGIAGIVEELFPVAATTDL 180 LD+ TWL RWQ DHT VAIE Q+TFGY QNWVVR LTP AP +A IVEELFP+AA TDL Sbjct 126 ALDEPTWLARWQHDHTPVAIETQSTFGYAQNWVVRTLTPGAPEVAAIVEELFPMAAITDL 185 Query 181 KAFFGAADDNDLRNRISRMVASTSAFGANQNIDTVPTSRYVFRTPF 226 KAFFGA+DD DL++R+ RMVAST+AFGAN+NIDTVPTSRYVF+TPF Sbjct 186 KAFFGASDDGDLQHRLGRMVASTAAFGANENIDTVPTSRYVFKTPF 231 >gi|118462683|ref|YP_882024.1| hypothetical protein MAV_2837 [Mycobacterium avium 104] gi|118163970|gb|ABK64867.1| conserved hypothetical protein [Mycobacterium avium 104] Length=233 Score = 341 bits (874), Expect = 5e-92, Method: Compositional matrix adjust. Identities = 175/226 (78%), Positives = 194/226 (86%), Gaps = 1/226 (0%) Query 1 VLMRPEPDDDWCARQRAQVADALLGLGVAGLSINVRDSTVRDSLMTLTTLYPPVAAVVSL 60 VLMR + ++DWCARQR VADALL LG+ GL++NVRD VR SLMTLTTL PPVAAVVS+ Sbjct 7 VLMRADSEEDWCARQRGAVADALLELGLPGLAVNVRDDAVRRSLMTLTTLDPPVAAVVSM 66 Query 61 WTQQCYGEQVAAALRLLAQECDELGAYLVTESVPLTFPSLVESGSRTPGLANIALLRRPD 120 WTQQCYGEQVAAALRLLA EC++L AYLVTESVPL P E SRTPGLANIALLRRP Sbjct 67 WTQQCYGEQVAAALRLLAAECEQLAAYLVTESVPLPAPQ-TEPASRTPGLANIALLRRPA 125 Query 121 GLDQATWLTRWQRDHTQVAIEAQATFGYTQNWVVRALTPEAPGIAGIVEELFPVAATTDL 180 G+DQ TWLTRWQRDHT VAIE Q+TFGYTQNWVVR LTP AP IAGIVEELFP A TDL Sbjct 126 GMDQETWLTRWQRDHTPVAIETQSTFGYTQNWVVRTLTPGAPEIAGIVEELFPAEAITDL 185 Query 181 KAFFGAADDNDLRNRISRMVASTSAFGANQNIDTVPTSRYVFRTPF 226 +AFFGAAD+ DL++R+ RMVAST+AFGAN+NIDTVPTSRYV +TPF Sbjct 186 QAFFGAADEQDLQHRLGRMVASTTAFGANENIDTVPTSRYVVKTPF 231 >gi|41407689|ref|NP_960525.1| hypothetical protein MAP1591 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41396042|gb|AAS03908.1| hypothetical protein MAP_1591 [Mycobacterium avium subsp. paratuberculosis K-10] gi|336457528|gb|EGO36534.1| hypothetical protein MAPs_22000 [Mycobacterium avium subsp. paratuberculosis S397] Length=233 Score = 337 bits (863), Expect = 1e-90, Method: Compositional matrix adjust. Identities = 174/226 (77%), Positives = 193/226 (86%), Gaps = 1/226 (0%) Query 1 VLMRPEPDDDWCARQRAQVADALLGLGVAGLSINVRDSTVRDSLMTLTTLYPPVAAVVSL 60 VLMR + ++DWCARQR VADALL LG+ GL++NVRD VR SLMTLTTL PPVAAVVS+ Sbjct 7 VLMRADSEEDWCARQRGVVADALLELGLPGLAVNVRDDAVRRSLMTLTTLDPPVAAVVSM 66 Query 61 WTQQCYGEQVAAALRLLAQECDELGAYLVTESVPLTFPSLVESGSRTPGLANIALLRRPD 120 WTQQ YGEQVAAALRLLA EC++L AYLVTESVPL P E SRTPGLANIALLRRP Sbjct 67 WTQQSYGEQVAAALRLLAAECEQLAAYLVTESVPLPAPQ-TEPASRTPGLANIALLRRPA 125 Query 121 GLDQATWLTRWQRDHTQVAIEAQATFGYTQNWVVRALTPEAPGIAGIVEELFPVAATTDL 180 G+DQ TWLTRWQRDHT VAIE Q+TFGYTQNWVVR LTP AP IAGIVEELFP A TDL Sbjct 126 GMDQETWLTRWQRDHTPVAIETQSTFGYTQNWVVRTLTPGAPEIAGIVEELFPAEAITDL 185 Query 181 KAFFGAADDNDLRNRISRMVASTSAFGANQNIDTVPTSRYVFRTPF 226 +AFFGAAD+ DL++R+ RMVAST+AFGAN+NIDTVPTSRYV +TPF Sbjct 186 QAFFGAADEQDLQHRLGRMVASTTAFGANENIDTVPTSRYVVKTPF 231 >gi|254775313|ref|ZP_05216829.1| hypothetical protein MaviaA2_11666 [Mycobacterium avium subsp. avium ATCC 25291] Length=233 Score = 335 bits (858), Expect = 4e-90, Method: Compositional matrix adjust. Identities = 172/226 (77%), Positives = 192/226 (85%), Gaps = 1/226 (0%) Query 1 VLMRPEPDDDWCARQRAQVADALLGLGVAGLSINVRDSTVRDSLMTLTTLYPPVAAVVSL 60 VLMR + ++DWCARQR VADALL LG+ GL++NVRD VR SLMTLTTL PPVAAVVS+ Sbjct 7 VLMRADSEEDWCARQRGAVADALLELGLPGLAVNVRDDAVRRSLMTLTTLDPPVAAVVSM 66 Query 61 WTQQCYGEQVAAALRLLAQECDELGAYLVTESVPLTFPSLVESGSRTPGLANIALLRRPD 120 WTQQCYGEQVAAALRLLA EC++L AYLVTESVPL P E SRTPGLANIALLR P Sbjct 67 WTQQCYGEQVAAALRLLAAECEQLAAYLVTESVPLPAPQ-TEPASRTPGLANIALLRGPA 125 Query 121 GLDQATWLTRWQRDHTQVAIEAQATFGYTQNWVVRALTPEAPGIAGIVEELFPVAATTDL 180 G+DQ TWLTRWQRDHT VAIE Q+TFGYTQNWVVR LTP AP IAGIVEELFP A DL Sbjct 126 GMDQETWLTRWQRDHTPVAIETQSTFGYTQNWVVRTLTPGAPEIAGIVEELFPAEAIIDL 185 Query 181 KAFFGAADDNDLRNRISRMVASTSAFGANQNIDTVPTSRYVFRTPF 226 +AFFGAAD+ DL++R+ RMVAST+AFGAN+NIDTVPTSRY+ +TPF Sbjct 186 QAFFGAADEQDLQHRLGRMVASTTAFGANENIDTVPTSRYLVKTPF 231 >gi|145223912|ref|YP_001134590.1| hypothetical protein Mflv_3326 [Mycobacterium gilvum PYR-GCK] gi|315444242|ref|YP_004077121.1| hypothetical protein Mspyr1_26540 [Mycobacterium sp. Spyr1] gi|145216398|gb|ABP45802.1| conserved hypothetical protein [Mycobacterium gilvum PYR-GCK] gi|315262545|gb|ADT99286.1| hypothetical protein Mspyr1_26540 [Mycobacterium sp. Spyr1] Length=245 Score = 290 bits (742), Expect = 1e-76, Method: Compositional matrix adjust. Identities = 146/227 (65%), Positives = 172/227 (76%), Gaps = 2/227 (0%) Query 1 VLMRPEPDDD-WCARQRAQVADALLGLGVAGLSINVRDSTVRDSLMTLTTLYPPVAAVVS 59 + +R P DD WC R VA LL G G+++NVRD+ V DSLMTLTTL PPV A+VS Sbjct 3 ITLRGAPGDDAWCTALRTDVAPLLLDTGAPGVTVNVRDAAVTDSLMTLTTLDPPVIALVS 62 Query 60 LWTQQCYGEQVAAALRLLAQECDELGAYLVTESVPLTFPSLVESGSRTPGLANIALLRRP 119 +WT Q YGEQ+ A LL Q C+ AYLVTESVPL P + G RTPGLAN+ALLRRP Sbjct 63 VWTPQYYGEQIHTATTLLGQICESTAAYLVTESVPLAGP-VTAPGERTPGLANVALLRRP 121 Query 120 DGLDQATWLTRWQRDHTQVAIEAQATFGYTQNWVVRALTPEAPGIAGIVEELFPVAATTD 179 GLD+ TWL RW DHT+VAI+ Q+TFGYTQN VVRA+T +AP I IVEELFP+ AT+D Sbjct 122 AGLDERTWLHRWHLDHTRVAIDTQSTFGYTQNTVVRAITDDAPPIDAIVEELFPIEATSD 181 Query 180 LKAFFGAADDNDLRNRISRMVASTSAFGANQNIDTVPTSRYVFRTPF 226 L AFFGAADD DL +R++RMVAST+AFGAN+N+DTVPTSRYV R PF Sbjct 182 LHAFFGAADDADLSDRMTRMVASTTAFGANENVDTVPTSRYVLRDPF 228 >gi|126435371|ref|YP_001071062.1| hypothetical protein Mjls_2791 [Mycobacterium sp. JLS] gi|126235171|gb|ABN98571.1| conserved hypothetical protein [Mycobacterium sp. JLS] Length=234 Score = 288 bits (737), Expect = 4e-76, Method: Compositional matrix adjust. Identities = 145/219 (67%), Positives = 169/219 (78%), Gaps = 1/219 (0%) Query 8 DDDWCARQRAQVADALLGLGVAGLSINVRDSTVRDSLMTLTTLYPPVAAVVSLWTQQCYG 67 D+DWC R R +V LL LGV GL++NVRD+ VRDSLMTLTTL PP AV+SLWTQQ YG Sbjct 14 DEDWCTRLRTEVTPRLLDLGVPGLTLNVRDAPVRDSLMTLTTLDPPGVAVLSLWTQQSYG 73 Query 68 EQVAAALRLLAQECDELGAYLVTESVPLTFPSLVESGSRTPGLANIALLRRPDGLDQATW 127 V A+ ++ ECD + AYLVTESVP+ P + G RT GLANIALLRRP+ LD+ TW Sbjct 74 GDVRGAVEVVTPECDAVAAYLVTESVPMPGP-VTSPGERTDGLANIALLRRPEHLDEPTW 132 Query 128 LTRWQRDHTQVAIEAQATFGYTQNWVVRALTPEAPGIAGIVEELFPVAATTDLKAFFGAA 187 TRWQ DHT VAI QATFGY QN VVRALT +AP IA IVEELFP+AA +DL AFFGA Sbjct 133 RTRWQIDHTPVAIATQATFGYVQNTVVRALTDDAPVIAAIVEELFPLAAVSDLHAFFGAV 192 Query 188 DDNDLRNRISRMVASTSAFGANQNIDTVPTSRYVFRTPF 226 DD DL +R+ +M+AST AFGAN++IDTVPTSRYV R+PF Sbjct 193 DDADLADRMQKMLASTEAFGANRDIDTVPTSRYVMRSPF 231 >gi|333992316|ref|YP_004524930.1| hypothetical protein JDM601_3677 [Mycobacterium sp. JDM601] gi|333488285|gb|AEF37677.1| conserved hypothetical protein [Mycobacterium sp. JDM601] Length=238 Score = 281 bits (720), Expect = 4e-74, Method: Compositional matrix adjust. Identities = 141/218 (65%), Positives = 169/218 (78%), Gaps = 1/218 (0%) Query 9 DDWCARQRAQVADALLGLGVAGLSINVRDSTVRDSLMTLTTLYPPVAAVVSLWTQQCYGE 68 ++WC + R VA LL LG+ GL++NVRD VRD++MTLTTL PPVAAV+SLWT+Q YG Sbjct 15 EEWCRKLRGPVAAELLDLGLPGLAVNVRDEPVRDAMMTLTTLDPPVAAVISLWTEQYYGT 74 Query 69 QVAAALRLLAQECDELGAYLVTESVPLTFPSLVESGSRTPGLANIALLRRPDGLDQATWL 128 Q AA+ L+ E D AYLVTES+P+ P L E G RT GLAN+ALLRRP LD+ATWL Sbjct 75 QARAAIALIEAESDSAAAYLVTESMPMPPPDLGE-GRRTRGLANVALLRRPADLDEATWL 133 Query 129 TRWQRDHTQVAIEAQATFGYTQNWVVRALTPEAPGIAGIVEELFPVAATTDLKAFFGAAD 188 RW DHTQVAI+ QATFGYTQN VVRALT +AP I GIVEELFP A +D AF+GAAD Sbjct 134 HRWHIDHTQVAIDTQATFGYTQNVVVRALTEDAPAIDGIVEELFPDGAVSDPYAFYGAAD 193 Query 189 DNDLRNRISRMVASTSAFGANQNIDTVPTSRYVFRTPF 226 + DL +R+ R++AS SAFGA+QNIDTVPTSRY+ R+PF Sbjct 194 EADLADRLKRLLASVSAFGAHQNIDTVPTSRYLLRSPF 231 >gi|118472568|ref|YP_887872.1| hypothetical protein MSMEG_3569 [Mycobacterium smegmatis str. MC2 155] gi|118173855|gb|ABK74751.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2 155] Length=247 Score = 280 bits (717), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 146/223 (66%), Positives = 162/223 (73%), Gaps = 3/223 (1%) Query 8 DDDWCARQRAQVADALLGLGVAGLSINVRDSTVRDSLMTLTTLYPPVAAVVSLWTQQCYG 67 DD WCAR V+ LL +G+ GL +N+RD+ VRDSLMTLTTL PPV A+ S+W QQ +G Sbjct 14 DDAWCARMVQDVSAELLEIGLPGLVLNIRDAPVRDSLMTLTTLDPPVVALASVWVQQYHG 73 Query 68 EQVAAALRLLAQECDELGAYLVTESVPLTFPSL---VESGSRTPGLANIALLRRPDGLDQ 124 EQ+ AAL LL ECD AYLVTES PL P L + G RT LANIALLRRP LD Sbjct 74 EQLRAALDLLGAECDSAAAYLVTESEPLPPPDLRAGLTPGRRTDALANIALLRRPPDLDA 133 Query 125 ATWLTRWQRDHTQVAIEAQATFGYTQNWVVRALTPEAPGIAGIVEELFPVAATTDLKAFF 184 ATWL RW DHT VAIE QATFGY QN VVRALT +AP I GIVEELFP A DL AFF Sbjct 134 ATWLHRWHVDHTPVAIETQATFGYVQNTVVRALTADAPAIDGIVEELFPPQAVADLHAFF 193 Query 185 GAADDNDLRNRISRMVASTSAFGANQNIDTVPTSRYVFRTPFK 227 GAADD DL R+ MVAST AFGA+ NIDTVPTSRYV+R+PF Sbjct 194 GAADDEDLSRRMQAMVASTDAFGASSNIDTVPTSRYVWRSPFS 236 >gi|108799727|ref|YP_639924.1| hypothetical protein Mmcs_2761 [Mycobacterium sp. MCS] gi|119868837|ref|YP_938789.1| hypothetical protein Mkms_2805 [Mycobacterium sp. KMS] gi|108770146|gb|ABG08868.1| conserved hypothetical protein [Mycobacterium sp. MCS] gi|119694926|gb|ABL91999.1| conserved hypothetical protein [Mycobacterium sp. KMS] Length=234 Score = 278 bits (712), Expect = 3e-73, Method: Compositional matrix adjust. Identities = 147/219 (68%), Positives = 171/219 (79%), Gaps = 1/219 (0%) Query 8 DDDWCARQRAQVADALLGLGVAGLSINVRDSTVRDSLMTLTTLYPPVAAVVSLWTQQCYG 67 D+DWC R R +V LL LGV GL++NVRD+ VRDSLMTLTTL PPV AV+SLWTQQ YG Sbjct 14 DEDWCTRLRTEVTPRLLDLGVPGLTLNVRDAPVRDSLMTLTTLDPPVVAVLSLWTQQSYG 73 Query 68 EQVAAALRLLAQECDELGAYLVTESVPLTFPSLVESGSRTPGLANIALLRRPDGLDQATW 127 V A+ ++ ECD + AYLVTESVP+ P + G RT GLANIALLRRP+ LD+ TW Sbjct 74 GDVRGAVEVVTPECDAVAAYLVTESVPMPGP-VTSPGERTDGLANIALLRRPEHLDEPTW 132 Query 128 LTRWQRDHTQVAIEAQATFGYTQNWVVRALTPEAPGIAGIVEELFPVAATTDLKAFFGAA 187 TRWQ DHT VAI QATFGY QN VVRALT +AP IA IVEELFP+AA +DL AFFGAA Sbjct 133 RTRWQIDHTPVAIATQATFGYVQNTVVRALTDDAPVIAAIVEELFPLAAVSDLHAFFGAA 192 Query 188 DDNDLRNRISRMVASTSAFGANQNIDTVPTSRYVFRTPF 226 DD DL +R+ +M+AST AFGAN++IDTVPTSRYV R+PF Sbjct 193 DDADLADRMQKMLASTEAFGANRDIDTVPTSRYVMRSPF 231 >gi|120404026|ref|YP_953855.1| hypothetical protein Mvan_3047 [Mycobacterium vanbaalenii PYR-1] gi|119956844|gb|ABM13849.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1] Length=245 Score = 278 bits (711), Expect = 4e-73, Method: Compositional matrix adjust. Identities = 138/223 (62%), Positives = 166/223 (75%), Gaps = 2/223 (0%) Query 1 VLMRPEPDDD-WCARQRAQVADALLGLGVAGLSINVRDSTVRDSLMTLTTLYPPVAAVVS 59 + +R P DD WCAR R +VA LL G G++++VRD+ V DSLMTLTTL PP VS Sbjct 3 IALRGAPGDDAWCARLRTEVAGTLLDTGAPGVTVHVRDAPVTDSLMTLTTLDPPAIGFVS 62 Query 60 LWTQQCYGEQVAAALRLLAQECDELGAYLVTESVPLTFPSLVESGSRTPGLANIALLRRP 119 +WT Q YG Q+ A+ +L + C+++ AYLVTESVPL P E G+RTPG NIALLRRP Sbjct 63 IWTPQYYGHQIRTAVEVLGECCEQVAAYLVTESVPLP-PPHTEPGARTPGFTNIALLRRP 121 Query 120 DGLDQATWLTRWQRDHTQVAIEAQATFGYTQNWVVRALTPEAPGIAGIVEELFPVAATTD 179 LD+ TWL RW DHT+VAIE Q+TFGY QN VVRALT AP I+ IVEELFP+ AT+D Sbjct 122 SELDEQTWLHRWHHDHTRVAIETQSTFGYVQNTVVRALTSGAPAISAIVEELFPIEATSD 181 Query 180 LKAFFGAADDNDLRNRISRMVASTSAFGANQNIDTVPTSRYVF 222 L AFFGA DD DL +R++RMVAST+AFGAN N+DTVPTSRYV Sbjct 182 LHAFFGALDDADLGDRMTRMVASTTAFGANANVDTVPTSRYVL 224 >gi|169630940|ref|YP_001704589.1| hypothetical protein MAB_3861 [Mycobacterium abscessus ATCC 19977] gi|169242907|emb|CAM63935.1| Conserved hypothetical protein [Mycobacterium abscessus] Length=233 Score = 194 bits (494), Expect = 7e-48, Method: Compositional matrix adjust. Identities = 107/228 (47%), Positives = 139/228 (61%), Gaps = 4/228 (1%) Query 2 LMRPEPD---DDWCARQRAQVADALLGLGVAGLSINVRDSTVRDSLMTLTTLYPPVAAVV 58 ++R PD D W R R D + GV GLS+ V D +VR + + L TL PP AA V Sbjct 7 VLRQPPDATTDAWAERLRTAAIDKIPAAGVHGLSVCVHDGSVRAANLRLVTLDPPFAAAV 66 Query 59 SLWTQQCYGEQVAAALRLLAQECDELGAYLVTESVPLTFPSLVESGSRTPGLANIALLRR 118 S+W QQ YG ++ +L++ + YLVTESVPL P E+ +R+ G NIALLRR Sbjct 67 SVWVQQSYGPEIREIATVLSRTSAAVHGYLVTESVPLPSPD-TENDTRSTGFTNIALLRR 125 Query 119 PDGLDQATWLTRWQRDHTQVAIEAQATFGYTQNWVVRALTPEAPGIAGIVEELFPVAATT 178 P + W +WQ HTQ A++ Q+T GY QN VVRA+TPEAP I+ IV E FP++A T Sbjct 126 PTDMSFDRWRQQWQGVHTQNALDLQSTIGYEQNLVVRAITPEAPVISAIVFEQFPISALT 185 Query 179 DLKAFFGAADDNDLRNRISRMVASTSAFGANQNIDTVPTSRYVFRTPF 226 D A++GA+D L R+ M+ S AFGA+ NIDTV TSRY PF Sbjct 186 DPLAWYGASDQQQLSERVIAMLDSVKAFGADTNIDTVATSRYDIVRPF 233 >gi|311744293|ref|ZP_07718097.1| conserved hypothetical protein [Aeromicrobium marinum DSM 15272] gi|311312466|gb|EFQ82379.1| conserved hypothetical protein [Aeromicrobium marinum DSM 15272] Length=225 Score = 161 bits (407), Expect = 8e-38, Method: Compositional matrix adjust. Identities = 90/203 (45%), Positives = 126/203 (63%), Gaps = 4/203 (1%) Query 21 DALLGLGVAGLSINVRDSTVRDSLMTLTTLYPPVAAVVSLWTQQCYGEQVAAALRLLAQE 80 + L GV L +N+ D V + M + T P ++AVVS+WT + L +L + Sbjct 23 EELAAAGVTRLQVNLDDEPVAQA-MRIPTTEPAISAVVSVWTASG-PTGLGDVLAVLGES 80 Query 81 CDELGAYLVTESVPLTFPSLVESGSRTPGLANIALLRRPDGLDQATWLTRWQRDHTQVAI 140 D + + V E P+ P + E G R LAN+ALLRRP L WL RW DHT VAI Sbjct 81 SDRVAGWQVDERRPIDPPEMGE-GVRADALANVALLRRPAELTHEEWLHRWLVDHTPVAI 139 Query 141 EAQATFGYTQNWVVRALTPEAPGIAGIVEELFPVAATTDLKAFFGA-ADDNDLRNRISRM 199 QATFGY QN VV A+TPEAP +A +VEELFP AA +D+ AF+G+ DD +L +R++R+ Sbjct 140 ATQATFGYLQNVVVEAVTPEAPPVAALVEELFPAAAVSDMHAFYGSDGDDAELTDRLTRL 199 Query 200 VASTSAFGANQNIDTVPTSRYVF 222 + S + GA++++D VP+SRY+F Sbjct 200 MDSVTRIGADRDLDLVPSSRYLF 222 >gi|262203564|ref|YP_003274772.1| hypothetical protein Gbro_3695 [Gordonia bronchialis DSM 43247] gi|262086911|gb|ACY22879.1| conserved hypothetical protein [Gordonia bronchialis DSM 43247] Length=229 Score = 160 bits (404), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 90/191 (48%), Positives = 121/191 (64%), Gaps = 8/191 (4%) Query 31 LSINVRDSTVRDSLMTLTTLYPPVAAVVSLWTQQCYGEQVAAALRLLAQECDELGAYLVT 90 + +NV D V + M ++ L PP+ AVV +W+ + E V +AL +A + A+ VT Sbjct 33 VQVNVSDGAVAGA-MRISHLDPPIEAVVGVWSDRV--EDVVSALAAMAGR---VAAWRVT 86 Query 91 ESVPLTFPSLVESGSRTPGLANIALLRRPDGLDQATWLTRWQRDHTQVAIEAQATFGYTQ 150 E PL P L G+R LANIA LRRP L + WL W +HT VAIE QATFGY Q Sbjct 87 ERAPLD-PRLPADGTRIDALANIAFLRRPADLSREEWLRIWLEEHTTVAIETQATFGYYQ 145 Query 151 NWVVRALTPEAPGIAGIVEELFPVAATTDLKAFFGAADDN-DLRNRISRMVASTSAFGAN 209 N V LTP+AP + IVEELFP+AA TD+ AF+G+ D +L +R++RM+ S FGA+ Sbjct 146 NVVEAPLTPDAPHVDAIVEELFPMAAITDIHAFYGSGGDQAELESRMTRMLDSVQRFGAD 205 Query 210 QNIDTVPTSRY 220 +N+D +PTSRY Sbjct 206 KNLDVIPTSRY 216 >gi|343928669|ref|ZP_08768114.1| hypothetical protein GOALK_120_00970 [Gordonia alkanivorans NBRC 16433] gi|343761418|dbj|GAA15040.1| hypothetical protein GOALK_120_00970 [Gordonia alkanivorans NBRC 16433] Length=231 Score = 154 bits (388), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 89/198 (45%), Positives = 120/198 (61%), Gaps = 9/198 (4%) Query 27 GVAGLSINVRDSTVRDSLMTLTTLYPPVAAVVSLWTQQCYGEQVAAALRLLAQECD-ELG 85 G + +N+ D V + M + L PP+ AVV+ W E V A L + Q + Sbjct 26 GAVRVQLNIADDRVSGA-MRIDELDPPIDAVVTYW-----AEDVDAVLPAVIQSVEGRPA 79 Query 86 AYLVTESVPLTFPSLVESGSRTPGLANIALLRRPDGLDQATWLTRWQRDHTQVAIEAQAT 145 A+ VT PL P L G+R L+NIA LRRP LD+ WL RW DHT+VAI+ QAT Sbjct 80 AWEVTARAPLD-PELPADGTRIDALSNIAFLRRPVELDRDEWLRRWLEDHTRVAIDTQAT 138 Query 146 FGYTQNWVVRALTPEAPGIAGIVEELFPVAATTDLKAFFGA-ADDNDLRNRISRMVASTS 204 FGY QN V R LT + P + IVEELFP+AA +D+ AF+G+ D +L R++RM+ S + Sbjct 139 FGYVQNIVERPLTDDPPPVDAIVEELFPMAAVSDIHAFYGSNGDQAELERRMTRMLTSVA 198 Query 205 AFGANQNIDTVPTSRYVF 222 FGA++++D VPTSRY F Sbjct 199 RFGADRHLDVVPTSRYDF 216 >gi|170701882|ref|ZP_02892810.1| conserved hypothetical protein [Burkholderia ambifaria IOP40-10] gi|170133210|gb|EDT01610.1| conserved hypothetical protein [Burkholderia ambifaria IOP40-10] Length=238 Score = 140 bits (354), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 92/227 (41%), Positives = 123/227 (55%), Gaps = 16/227 (7%) Query 5 PEPDDDWCARQRAQVADALLGLGVAGLSINVRDSTVRDSL-MTLTTLYPPVAAVVSLWTQ 63 PEP W RAQ+AD LL LG G+ +NV D+ V + + T +P + +V++W Sbjct 16 PEP---WSRSVRAQLADKLLSLGAHGVQVNVADADVAPAAGLKQTNTHPGIDGIVAVWVD 72 Query 64 QC---YGEQVAAALRLLAQECDELGAYLVTESVPLT---FPSLVESGSRTPGLANIALLR 117 + + A+R +A + AYLVTES P+ FP+ G RT G + +A L+ Sbjct 73 SANPMFRQPFDDAVRTVAPH---MAAYLVTESQPIPNTRFPA--RPGERTSGFSQLAFLK 127 Query 118 RPDGLDQATWLTRWQRDHTQVAIEAQATFGYTQNWVVRALTPEAPGIAGIVEELFPVAAT 177 RP L WL W HT+VAI+ Q F Y QN VVRALT APG IVEE FP AA Sbjct 128 RPPRLTHEAWLDVWHGHHTRVAIDTQDNFLYVQNVVVRALTHAAPGYDAIVEECFPAAAM 187 Query 178 TDLKAFFGA-ADDNDLRNRISRMVASTSAFGANQNIDTVPTSRYVFR 223 TD AFF A D+ + +++M+ S F ID VPTS+YV + Sbjct 188 TDPYAFFDAVGDEEKFQRNVAQMMDSCGRFIDFDKIDVVPTSQYVVK 234 >gi|78062355|ref|YP_372263.1| hypothetical protein Bcep18194_B1505 [Burkholderia sp. 383] gi|77970240|gb|ABB11619.1| hypothetical protein Bcep18194_B1505 [Burkholderia sp. 383] Length=238 Score = 140 bits (352), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 90/223 (41%), Positives = 119/223 (54%), Gaps = 13/223 (5%) Query 9 DDWCARQRAQVADALLGLGVAGLSINVRDSTVRDSL-MTLTTLYPPVAAVVSLWTQQC-- 65 D W RAQ+AD LL LG G+ +NV D+ V + + T +P + +V++W Sbjct 17 DQWNRTVRAQLADKLLSLGAHGVQVNVADADVAPAAGLKQTNTHPGIDGIVAVWVDSANA 76 Query 66 -YGEQVAAALRLLAQECDELGAYLVTESVPL---TFPSLVESGSRTPGLANIALLRRPDG 121 + + A+R + + AYLVTES P+ FP+ G RT G + +A L+RP Sbjct 77 MFRQPFDDAVRAV---VPHMAAYLVTESQPIPNTRFPA--RPGERTTGFSQLAFLKRPPR 131 Query 122 LDQATWLTRWQRDHTQVAIEAQATFGYTQNWVVRALTPEAPGIAGIVEELFPVAATTDLK 181 L WL W HT+VAI+ Q F Y QN VVRALT APG IVEE FP AA TD Sbjct 132 LTHEAWLDVWHGHHTRVAIDTQDNFLYVQNVVVRALTHAAPGYDAIVEECFPAAAMTDPH 191 Query 182 AFFGA-ADDNDLRNRISRMVASTSAFGANQNIDTVPTSRYVFR 223 AFF A DD + ++ M+ S F ID VPTS+YV + Sbjct 192 AFFDAVGDDEKFQRNVAEMMDSCGRFIDFDKIDVVPTSQYVVK 234 >gi|325522215|gb|EGD00855.1| hypothetical protein B1M_29490 [Burkholderia sp. TJI49] Length=238 Score = 139 bits (351), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 94/230 (41%), Positives = 126/230 (55%), Gaps = 22/230 (9%) Query 6 EPDDDWCARQRAQVADALLGLGVAGLSINVRDSTVRDSL-MTLTTLYPPVAAVVSLWT-- 62 EPD W RAQ+AD LL LG G+ +NV D+ V + + T +P + +V++W Sbjct 15 EPDR-WSRTLRAQLADRLLSLGAHGVQVNVADADVAPAAGLKQTNTHPGIDGIVAVWLDS 73 Query 63 -----QQCYGEQVAAALRLLAQECDELGAYLVTESVPL---TFPSLVESGSRTPGLANIA 114 +Q + E V A++ +A AYLVTES P+ FP+ +G RT G + +A Sbjct 74 ANAMFRQPFDEAVRASVPHMA-------AYLVTESQPIPNTRFPA--RAGERTSGFSQLA 124 Query 115 LLRRPDGLDQATWLTRWQRDHTQVAIEAQATFGYTQNWVVRALTPEAPGIAGIVEELFPV 174 L+RP L WL W HT+VAI+ Q F Y QN VVRALT APG IVEE FP Sbjct 125 FLKRPPRLTHEAWLDVWHGHHTRVAIDTQDNFLYVQNVVVRALTHAAPGYDAIVEECFPA 184 Query 175 AATTDLKAFFGA-ADDNDLRNRISRMVASTSAFGANQNIDTVPTSRYVFR 223 AA TD AFF A D+ + ++ M+ S + F ID VPTS+YV + Sbjct 185 AAMTDPHAFFDAVGDEAKFQRNVAEMMDSCARFIDFDKIDVVPTSQYVVK 234 >gi|206563436|ref|YP_002234199.1| hypothetical protein BCAM1587 [Burkholderia cenocepacia J2315] gi|198039476|emb|CAR55443.1| conserved hypothetical protein [Burkholderia cenocepacia J2315] Length=238 Score = 136 bits (342), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 89/223 (40%), Positives = 118/223 (53%), Gaps = 13/223 (5%) Query 9 DDWCARQRAQVADALLGLGVAGLSINVRDSTVRDSL-MTLTTLYPPVAAVVSLWTQQC-- 65 D W RAQ+AD LL LG G+ +NV D+ V + + T P + +V++W Sbjct 17 DQWSRGVRAQLADRLLSLGAHGVQVNVADADVAPAAGLKQTNTQPGIDGIVAVWVDSANA 76 Query 66 -YGEQVAAALRLLAQECDELGAYLVTESVPL---TFPSLVESGSRTPGLANIALLRRPDG 121 + + A+R + + AYLVTES P+ FP+ G RT G + +A L+RP Sbjct 77 MFRQPFDDAVRAV---VPHMAAYLVTESQPIPNTRFPA--RPGERTTGFSQLAFLKRPPR 131 Query 122 LDQATWLTRWQRDHTQVAIEAQATFGYTQNWVVRALTPEAPGIAGIVEELFPVAATTDLK 181 L WL W HT+VAI+ Q F Y QN VVRALT APG IVEE FP AA TD Sbjct 132 LTHEAWLDVWHGHHTRVAIDTQDNFLYVQNVVVRALTHAAPGYDAIVEECFPAAAMTDPH 191 Query 182 AFFGA-ADDNDLRNRISRMVASTSAFGANQNIDTVPTSRYVFR 223 AFF A D+ + ++ M+ S F ID VPTS+YV + Sbjct 192 AFFDAVGDEEKFQRNVAEMMDSCGRFIDFDKIDVVPTSQYVVK 234 >gi|116694604|ref|YP_728815.1| hypothetical protein H16_B0653 [Ralstonia eutropha H16] gi|113529103|emb|CAJ95450.1| conserved hypothetical protein [Ralstonia eutropha H16] Length=238 Score = 135 bits (341), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 87/219 (40%), Positives = 110/219 (51%), Gaps = 7/219 (3%) Query 10 DWCARQRAQVADALLGLGVAGLSINVRDSTVRDSL-MTLTTLYPPVAAVVSLWTQQCYGE 68 ++ R R +AD LL LG GL +NV D V + + P + +VS+W Sbjct 18 EFARRLRTTLADKLLALGARGLQVNVADDAVLPAAGLRQANTRPQMDGLVSVWMDSAIDR 77 Query 69 QVAAALRLLAQECDELGAYLVTESVPLT---FPSLVESGSRTPGLANIALLRRPDGLDQA 125 Q + +A + YLVTES P+ FP+ G RTPG A +A L RP L Sbjct 78 QRQPFDQAIAAAVGRMAGYLVTESQPIRNTRFPA--APGERTPGFAQLAFLTRPPRLTPQ 135 Query 126 TWLTRWQRDHTQVAIEAQATFGYTQNWVVRALTPEAPGIAGIVEELFPVAATTDLKAFFG 185 WL W HT VA+E Q F Y QN VVR LT AP IVEE FP AA TD +AFF Sbjct 136 AWLDIWHNHHTPVAVETQDNFLYVQNVVVRPLTYAAPHYDAIVEEGFPDAAMTDPQAFFD 195 Query 186 AADDND-LRNRISRMVASTSAFGANQNIDTVPTSRYVFR 223 AA D D + + M+ S F ID +PTS+Y+ R Sbjct 196 AAGDEDKFQRNLQAMMESCQRFIDFDKIDVIPTSQYLVR 234 >gi|54024952|ref|YP_119194.1| hypothetical protein nfa29830 [Nocardia farcinica IFM 10152] gi|54016460|dbj|BAD57830.1| hypothetical protein [Nocardia farcinica IFM 10152] Length=222 Score = 135 bits (339), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 85/201 (43%), Positives = 117/201 (59%), Gaps = 5/201 (2%) Query 21 DALLGLGVAGLSINVRDSTVRDSLMTLTTLYPPVAAVVSLWTQQCYGEQVAAALRLLAQE 80 D L G G + ++V D V +++ LTT PV AV+SL + V+A +LA Sbjct 23 DELTGAGAREVILDVADDDVAAAMLRLTTFETPVEAVLSLVAEPATAAAVSA---VLAGR 79 Query 81 CDELGAYLVTESVPLTFPSLVESGSRTPGLANIALLRRPDGLDQATWLTRWQRDHTQVAI 140 + + + V E+ P G R PGL N+A LRRP L WL RW+ HT+VAI Sbjct 80 AERVAGWRV-ETTAPLPPPTTPVGVRAPGLTNVAFLRRPAELAYDEWLARWRGAHTEVAI 138 Query 141 EAQATFGYTQNWVVRALTPEAPGIAGIVEELFPVAATTDLKAFFGAADD-NDLRNRISRM 199 QATFGY Q+ V+ +T +AP IA +VEELFP+ A D AF+G+ D +L RI M Sbjct 139 ATQATFGYVQHRVLEPVTADAPEIAAVVEELFPIEALHDPHAFYGSGGDPAELGRRIEAM 198 Query 200 VASTSAFGANQNIDTVPTSRY 220 +AS + FGA++++D VPTSRY Sbjct 199 MASVATFGADRDLDVVPTSRY 219 >gi|319949556|ref|ZP_08023603.1| hypothetical protein ES5_08886 [Dietzia cinnamea P4] gi|319436774|gb|EFV91847.1| hypothetical protein ES5_08886 [Dietzia cinnamea P4] Length=240 Score = 129 bits (325), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 87/212 (42%), Positives = 116/212 (55%), Gaps = 7/212 (3%) Query 16 RAQVADALLG----LGVAGLSINVRDSTVRDSLMTLTTLYPPVAAVVSLWTQQCYGEQVA 71 R ++ +A+ G LGV + +NVRD V +++ + PV AVV Sbjct 24 RGRITEAVTGPLAALGVDEVVVNVRDEQVAGAMIDVRVTELPVLAVVRTRVP-VASATAC 82 Query 72 AALRLLAQECDELGAYLVTESVPLTFPSLVESGSRTPGLANIALLRRPDGLDQATWLTRW 131 A L + + A+ VT S PL P+ G R G+ANIA LRRP + + WL W Sbjct 83 AELLAALEALGPVSAWSVTASEPLPAPAPGPDG-RCEGMANIAFLRRPGRIGREEWLRVW 141 Query 132 QRDHTQVAIEAQATFGYTQNWVVRALTPEAPGIAGIVEELFPVAATTDLKAFFGA-ADDN 190 +HT+VAI+ Q+T YTQ+ VVRALTP+AP I GIVEE+FP A TDL FF A DD Sbjct 142 LEEHTRVAIDTQSTTSYTQHVVVRALTPDAPRIDGIVEEVFPAEAATDLGVFFDARGDDE 201 Query 191 DLRNRISRMVASTSAFGANQNIDTVPTSRYVF 222 + + M AST+ F + +D VPT RYV Sbjct 202 RMTANMRAMTASTARFLDDGTVDAVPTGRYVV 233 >gi|73541246|ref|YP_295766.1| hypothetical protein Reut_A1556 [Ralstonia eutropha JMP134] gi|72118659|gb|AAZ60922.1| conserved hypothetical protein [Ralstonia eutropha JMP134] Length=238 Score = 129 bits (323), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 88/224 (40%), Positives = 120/224 (54%), Gaps = 25/224 (11%) Query 16 RAQVADALLGLGVAGLSINVRDSTVRDS--LMTLTTLYPPVAAVVSLWTQQCYGEQVAAA 73 R ++A LL LG G+ INV+D V + L + TL P + +VS+W V +A Sbjct 24 RTKLAQQLLQLGARGVQINVQDEDVAPAAALRQVNTL-PQMDGLVSVW--------VDSA 74 Query 74 LRLLAQECDE--------LGAYLVTESVPLT---FPSLVESGSRTPGLANIALLRRPDGL 122 + L + D+ + YLVTES P+ P+ +G RTPG + +A L+RP L Sbjct 75 ITSLRRPFDDAVLAATGRMAGYLVTESQPIRNTRHPA--RAGERTPGFSQLAFLKRPPRL 132 Query 123 DQATWLTRWQRDHTQVAIEAQATFGYTQNWVVRALTPEAPGIAGIVEELFPVAATTDLKA 182 WL W HTQVAI+ Q TF Y QN VVRALT AP + +VEE FP AA TD +A Sbjct 133 THEAWLDTWHNRHTQVAIDTQDTFLYVQNVVVRALTYGAPPLDAVVEEGFPEAAMTDPQA 192 Query 183 FFGA-ADDNDLRNRISRMVASTSAFGANQNIDTVPTSRYVFRTP 225 FF A D+ + ++ M+ S F ID V +S+Y+ R P Sbjct 193 FFDAPGDEAKYQRNLAAMMESCQRFIDFDKIDVVASSQYIVRPP 236 >gi|339321917|ref|YP_004680811.1| hypothetical protein CNE_2c06000 [Cupriavidus necator N-1] gi|338168525|gb|AEI79579.1| hypothetical protein CNE_2c06000 [Cupriavidus necator N-1] Length=238 Score = 128 bits (322), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 87/226 (39%), Positives = 115/226 (51%), Gaps = 21/226 (9%) Query 10 DWCARQRAQVADALLGLGVAGLSINVRDSTVRDSL-MTLTTLYPPVAAVVSLWT------ 62 ++ R R +AD LL LG GL +NV D V + + P + +VS+W Sbjct 18 EFARRLRTTLADKLLALGARGLQVNVADDAVLPAAGLRQANTRPQMDGLVSVWMDSAIDC 77 Query 63 -QQCYGEQVAAALRLLAQECDELGAYLVTESVPLT---FPSLVESGSRTPGLANIALLRR 118 +Q + + + AA+ +A YLVTES P+ FP+ G RTPG A +A L R Sbjct 78 LRQPFDQAIEAAVGRMA-------GYLVTESQPIRNTRFPA--APGERTPGFAQLAFLTR 128 Query 119 PDGLDQATWLTRWQRDHTQVAIEAQATFGYTQNWVVRALTPEAPGIAGIVEELFPVAATT 178 P L WL W HT VA+E Q F Y QN VVR +T AP IVEE FP AA T Sbjct 129 PPRLTPQAWLDIWHNHHTPVAVETQDNFLYVQNVVVRPVTYAAPHYDAIVEEGFPDAAMT 188 Query 179 DLKAFFGAA-DDNDLRNRISRMVASTSAFGANQNIDTVPTSRYVFR 223 D +AFF AA D+ + + M+ S F ID +PTS+Y+ R Sbjct 189 DPQAFFDAAGDEGKFQRNLQAMMESCQRFIDFDKIDVIPTSQYLVR 234 >gi|119717942|ref|YP_924907.1| hypothetical protein Noca_3720 [Nocardioides sp. JS614] gi|119538603|gb|ABL83220.1| conserved hypothetical protein [Nocardioides sp. JS614] Length=225 Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 79/201 (40%), Positives = 111/201 (56%), Gaps = 9/201 (4%) Query 23 LLGLGVAGLSINVRDSTVRDSLMTLTTLYPPVAAVVSLWTQQCYGEQVAAALRLLAQECD 82 L GV L +NV D V ++ T PV AVVS+W + LA Sbjct 26 LAAAGVRRLQLNVDDEQVAGAMRIPTG--EPVRAVVSVWDAEP-----TPVADALATAAA 78 Query 83 ELGAYLVTESVPLTFPSLVESGSRTPGLANIALLRRPDGLDQATWLTRWQRDHTQVAIEA 142 + + V E L P + GSR L+N+A+LRRP L WL RW +HT +AI Sbjct 79 TVHGWRVDERRRLDPPETWD-GSRADALSNVAILRRPAELAHEEWLRRWMVEHTPIAIRT 137 Query 143 QATFGYTQNWVVRALTPEAPGIAGIVEELFPVAATTDLKAFFGA-ADDNDLRNRISRMVA 201 QATFGY QN VV +T AP + +VEELFP A +D AF+G+ D+ +L R++ ++A Sbjct 138 QATFGYVQNVVVEPVTAGAPRVDAVVEELFPSAGMSDTHAFYGSGGDEAELGRRLTELMA 197 Query 202 STSAFGANQNIDTVPTSRYVF 222 S + GA++++D VPTSRY++ Sbjct 198 SVTRIGADRDLDLVPTSRYLY 218 >gi|172063365|ref|YP_001811016.1| hypothetical protein BamMC406_4339 [Burkholderia ambifaria MC40-6] gi|171995882|gb|ACB66800.1| conserved hypothetical protein [Burkholderia ambifaria MC40-6] Length=162 Score = 119 bits (297), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 67/143 (47%), Positives = 82/143 (58%), Gaps = 6/143 (4%) Query 83 ELGAYLVTESVPL---TFPSLVESGSRTPGLANIALLRRPDGLDQATWLTRWQRDHTQVA 139 + AYLVTES P+ FP+ G RT G + +A L+RP L WL W HT+VA Sbjct 16 HMAAYLVTESQPIPNTRFPA--RPGERTSGFSQLAFLKRPPRLTHEAWLDVWHGHHTRVA 73 Query 140 IEAQATFGYTQNWVVRALTPEAPGIAGIVEELFPVAATTDLKAFFGA-ADDNDLRNRISR 198 I+ Q F Y QN VVRALT APG IVEE FP AA TD AFF A D+ + +++ Sbjct 74 IDTQDNFLYVQNVVVRALTHAAPGYDAIVEECFPAAAMTDPYAFFNAVGDEEKFQRNVAQ 133 Query 199 MVASTSAFGANQNIDTVPTSRYV 221 M+ S F ID VPTS+YV Sbjct 134 MMDSCGRFIDFDKIDVVPTSQYV 156 >gi|148556229|ref|YP_001263811.1| hypothetical protein Swit_3327 [Sphingomonas wittichii RW1] gi|148501419|gb|ABQ69673.1| hypothetical protein Swit_3327 [Sphingomonas wittichii RW1] Length=265 Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 79/220 (36%), Positives = 104/220 (48%), Gaps = 4/220 (1%) Query 7 PDDDWCARQRAQVADALLGLGVAGLSINVRDSTV-RDSLMTLTTLYPPVAAVVSLWTQQC 65 P D + A +VADA+ V L INVRD + + S P + A V LW Sbjct 46 PRDAFNAALLGEVADAI-APHVRALRINVRDDRLPQGSNPVFVVTEPQMEAAVQLWVDTA 104 Query 66 YGEQVAAALRLLAQECDELGAYLVTESVPLTFPSLVESGSRTPGLANIALLRRPDGLDQA 125 Y A LA + +LV ES PL L G T G + + + +P LD Sbjct 105 YPPARAPIEAALATVASRIEGWLVAESTPLPN-RLHPPGQPTEGFSQVVFIEKPAALDHE 163 Query 126 TWLTRWQRDHTQVAIEAQATFGYTQNWVVRALTPEAPGIAGIVEELFPVAATTDLKAFFG 185 TW WQ HT+VAI Q+ F Y QN VVR +T A A IVEE FP+AA TD + ++ Sbjct 164 TWRRNWQDGHTEVAIVTQSNFEYVQNLVVRPVTDPAGPYAAIVEECFPIAAITDKQLYYD 223 Query 186 AADD-NDLRNRISRMVASTSAFGANQNIDTVPTSRYVFRT 224 AA D L + M+ S + F Q D +P +Y +T Sbjct 224 AAGDPAKLAANEAAMLESCARFIGAQGCDCIPMRQYEIKT 263 >gi|264678160|ref|YP_003278067.1| hypothetical protein CtCNB1_2025 [Comamonas testosteroni CNB-2] gi|262208673|gb|ACY32771.1| hypothetical protein CtCNB1_2025 [Comamonas testosteroni CNB-2] Length=240 Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 67/196 (35%), Positives = 93/196 (48%), Gaps = 12/196 (6%) Query 35 VRDSTVRDSLMTLTTLYPPVAAVVSLWTQQCYGEQVAAALRLLAQECDELGAYLVTESVP 94 V D+T + + +T P+ ++SLW + L+AQ+ L AYLV ES P Sbjct 43 VDDATDKAASQRITFSQHPLDGMISLWLDS--ASMLGPVQALIAQQVASLHAYLVCESEP 100 Query 95 L---------TFPSLVESGSRTPGLANIALLRRPDGLDQATWLTRWQRDHTQVAIEAQAT 145 F + V G RTPG+ +AL R+P G++ W+ W+ H A Q+ Sbjct 101 YPEERKARIARFDAEVALGKRTPGMCQVALFRKPVGMNFEEWMVHWREGHGSNAYPLQSI 160 Query 146 FGYTQNWVVRALTPEAPGIAGIVEELFPVAATTDLKAFFGAADDND-LRNRISRMVASTS 204 FGY QN VVR LT +AP + IVEE FP A F+ D D LR R M S + Sbjct 161 FGYRQNLVVRRLTEDAPEVHAIVEEQFPDIAIGSAHGFYDTQGDEDLLRQRQKYMSESVT 220 Query 205 AFGANQNIDTVPTSRY 220 ++D + TS Y Sbjct 221 PIMDFSSLDCILTSFY 236 >gi|334145049|ref|YP_004538258.1| hypothetical protein PP1Y_Mpl3451 [Novosphingobium sp. PP1Y] gi|333936932|emb|CCA90291.1| conserved hypothetical protein [Novosphingobium sp. PP1Y] Length=237 Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 78/224 (35%), Positives = 108/224 (49%), Gaps = 7/224 (3%) Query 6 EPDDDWCARQRAQVADALLGLGVAGLSINVRDSTVRDSL-MTLTTLYPPVAAVVSLWTQQ 64 EP D+ R + L G +G+ +N+RD V + + + P A+V W Sbjct 14 EPRTDFAQRLLETLPVTLKKAGASGIRLNLRDEAVAPAAGLIQQSQEPQQDALVQFWLPS 73 Query 65 CYGEQVAAALRLLAQECDELGAYLVTES--VPLTFPSLVESGSRTPGLANIALLR-RPDG 121 A ++LA +LV ES +P T L E G RT G + + + RPD Sbjct 74 ANARFRGAVDKVLAAHSARFALWLVCESTIIPNTAHPLAE-GRRTWGWSQASFITFRPD- 131 Query 122 LDQATWLTRWQRDHTQVAIEAQATFGYTQNWVVRALTPEAPGIAGIVEELFPVAATTDLK 181 L + + W HT+VAI+ QA F Y QN VVR LT AP VEE F A TD Sbjct 132 LTREEAIAHWHGHHTRVAIDVQANFEYVQNIVVRPLTEGAPAYDAFVEECFSPEAMTDSP 191 Query 182 AFFGAADDNDLRNR-ISRMVASTSAFGANQNIDTVPTSRYVFRT 224 AFF AA D + NR + M+ S +AF +D +PTS++ FR+ Sbjct 192 AFFDAAGDEEKFNRNLKDMMDSCTAFIDFARVDIIPTSQFDFRS 235 >gi|146275887|ref|YP_001166047.1| hypothetical protein Saro_3662 [Novosphingobium aromaticivorans DSM 12444] gi|145322578|gb|ABP64521.1| hypothetical protein Saro_3662 [Novosphingobium aromaticivorans DSM 12444] Length=252 Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 79/234 (34%), Positives = 104/234 (45%), Gaps = 18/234 (7%) Query 6 EPDDDWCARQRAQVADALLGLGVAGLSINVRDSTVRDSL-MTLTTLYPPVAAVVSLWTQQ 64 E +D+ AR A + AL+ G +G+ INVRD+TV + P AAV W Sbjct 14 ESREDFAARILATLPGALVAAGASGVRINVRDATVAPGEGLVQQWQAPQQAAVAQFWMPS 73 Query 65 CYGEQVAAALRLLAQECDELGAYLVTESV-------PLTFPSLVESGSRTPGLANIA--- 114 LAQ A+LV ES P++ PS + P L A Sbjct 74 ANARFRGPVDAALAQHSARFEAWLVCESTIIPNDLHPVSAPSPEKVSPGKPLLPERAWGW 133 Query 115 -----LLRRPDGLDQATWLTRWQRDHTQVAIEAQATFGYTQNWVVRALTPEAPGIAGIVE 169 + RPD +A + W HT+VAIE Q F Y QN VVR LT AP VE Sbjct 134 SQASFISFRPDLTREAA-IAHWHSHHTRVAIETQDNFEYVQNLVVRPLTDTAPRYDAFVE 192 Query 170 ELFPVAATTDLKAFFGA-ADDNDLRNRISRMVASTSAFGANQNIDTVPTSRYVF 222 E FP+ A + +AFF A L ++ M+ S + F ID VPTS++ F Sbjct 193 ECFPLEALDNPEAFFDAVGKPEKLAENLATMMESCNGFIDFTRIDIVPTSQFDF 246 >gi|339328461|ref|YP_004688153.1| hypothetical protein CNE_BB1p06950 [Cupriavidus necator N-1] gi|338171062|gb|AEI82115.1| hypothetical protein CNE_BB1p06950 [Cupriavidus necator N-1] Length=183 Score = 85.9 bits (211), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 48/104 (47%), Positives = 57/104 (55%), Gaps = 1/104 (0%) Query 114 ALLRRPDGLDQATWLTRWQRDHTQVAIEAQATFGYTQNWVVRALTPEAPGIAGIVEELFP 173 + L+RP L WL W +DHTQVAIE Q F Y QN VV LT AP I +VEE FP Sbjct 33 STLKRPPRLTHEAWLDIWHQDHTQVAIETQDDFLYVQNVVVHPLTHGAPIIDAVVEECFP 92 Query 174 VAATTDLKAFFGAADDND-LRNRISRMVASTSAFGANQNIDTVP 216 +A TD AFF A D D L+ M+ S + F +D VP Sbjct 93 ASAMTDPHAFFDAVGDEDKLKRNSGSMMDSCNRFIDFDKLDVVP 136 >gi|240168708|ref|ZP_04747367.1| hypothetical protein MkanA1_05305 [Mycobacterium kansasii ATCC 12478] Length=239 Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 64/217 (30%), Positives = 99/217 (46%), Gaps = 15/217 (6%) Query 19 VADALLGLGVAGLSINVRDSTVRDSLMTLTTLY--PPVAAVVSLWTQQCYGEQVAAALRL 76 VA LL G LS+ + D + + Y + A V++W GE A+ + Sbjct 27 VAPKLLQTGALKLSMYIVDQDA--DIRSPAPFYAGERMCAEVAIWVDDA-GEH-ASFDEI 82 Query 77 LAQECDELGAYLVTESVPLTF-------PSLVESGSRTPGLANIALLRRPDGLDQATWLT 129 + YLV ES+ + P G R+PG+ + L+ RP L +A W+ Sbjct 83 FRKAGFRFAGYLVDESIYTEYGGNRHSGPRNWPDGQRSPGIVAVTLMERPKRLSRAEWIR 142 Query 130 RWQRDHTQVAIEAQATFGYTQNWVVRALTPEAPGIAGIVEELFP-VAATTDLKAFFGAAD 188 RW + V+ Q Y +N V+RA+TP+AP GIVEE +P T+ F+GA Sbjct 143 RWHGTQSPVSEAMQPRARYVRNLVIRAVTPDAPSYEGIVEEAWPSTRHVTNYFLFYGAGR 202 Query 189 DN-DLRNRISRMVASTSAFGANQNIDTVPTSRYVFRT 224 + L I +M+ S ++F I T TS Y+ ++ Sbjct 203 NPFKLVLNIIKMLRSVTSFLDLHRIRTTMTSEYIMKS 239 >gi|329897250|ref|ZP_08271989.1| hypothetical protein IMCC3088_2660 [gamma proteobacterium IMCC3088] gi|328921312|gb|EGG28707.1| hypothetical protein IMCC3088_2660 [gamma proteobacterium IMCC3088] Length=188 Score = 79.0 bits (193), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 42/118 (36%), Positives = 63/118 (54%), Gaps = 4/118 (3%) Query 104 GSRTPGLANIALLRRPDGLDQATWLTRWQRDHTQVAIEAQATFGYTQNWVVRALTPEAPG 163 G RTPG + ++ + +A ++ W+ HTQ+AI+ Q+TFGY QN AL + G Sbjct 71 GQRTPGTVQLCTFQQKRDISRAEFIAIWRDSHTQIAIDTQSTFGYFQNL---ALEGQDSG 127 Query 164 IAGIVEELFPVAATTDLKAFFGAADD-NDLRNRISRMVASTSAFGANQNIDTVPTSRY 220 +VEE FP+ A T +AFF A D L++ I M+ S + F I+ + S Y Sbjct 128 FDALVEEHFPIEAATSPEAFFDAVGDPAKLKHNIDCMMESCARFIQQDTINVIHLSEY 185 >gi|40062880|gb|AAR37751.1| hypothetical protein MBMO_EBAC000-63A02.29 [uncultured marine bacterium 442] Length=221 Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 43/123 (35%), Positives = 57/123 (47%), Gaps = 8/123 (6%) Query 86 AYLVTESVPLTFPSLVESGSRTPGLANIALLRRPDGLDQATWLTRWQRDHTQVAIEAQAT 145 AYL PL P L G R G + +R ++ A W ++HT VA+ Q T Sbjct 88 AYLCEGITPL-MPKL-NVGERFLGTLQLCCFQRRADINSAQLYQYWLQEHTDVAMSTQNT 145 Query 146 FGYTQNWVVRALTPEAPGIAGIVEELFPVAATTDLKAFFGAADDNDLR--NRISRMVAST 203 GY QN R P GIVEE FP A+ ++AFF A DN+ R I ++ S+ Sbjct 146 LGYRQN---RVSISGEPHFDGIVEEYFPPDASHSMQAFF-ADGDNEARMWEHIEKLTQSS 201 Query 204 SAF 206 F Sbjct 202 ERF 204 >gi|119504179|ref|ZP_01626260.1| hypothetical protein MGP2080_10523 [marine gamma proteobacterium HTCC2080] gi|119460182|gb|EAW41276.1| hypothetical protein MGP2080_10523 [marine gamma proteobacterium HTCC2080] Length=221 Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 43/123 (35%), Positives = 57/123 (47%), Gaps = 8/123 (6%) Query 86 AYLVTESVPLTFPSLVESGSRTPGLANIALLRRPDGLDQATWLTRWQRDHTQVAIEAQAT 145 AYL PL P L G R G + +R ++ A W ++HT VA+ Q T Sbjct 88 AYLCEGITPL-MPKL-NVGERFLGTLQLCCFQRRADINSAQLHQYWLQEHTDVALSTQNT 145 Query 146 FGYTQNWVVRALTPEAPGIAGIVEELFPVAATTDLKAFFGAADDNDLR--NRISRMVAST 203 GY QN R P GIVEE FP A+ ++AFF A DN+ R I ++ S+ Sbjct 146 LGYRQN---RVSISGEPHFDGIVEEYFPPEASHSMEAFF-ADGDNEARMWEHIEKLTQSS 201 Query 204 SAF 206 F Sbjct 202 ERF 204 >gi|326385020|ref|ZP_08206692.1| hypothetical protein SCNU_18853 [Gordonia neofelifaecis NRRL B-59395] gi|326196234|gb|EGD53436.1| hypothetical protein SCNU_18853 [Gordonia neofelifaecis NRRL B-59395] Length=195 Score = 44.3 bits (103), Expect = 0.012, Method: Compositional matrix adjust. Identities = 32/88 (37%), Positives = 41/88 (47%), Gaps = 8/88 (9%) Query 86 AYLVTESVPLTFPSLVESGSRTPGLANIALLRRPDGLDQATWLTRWQRDHT-QVAIEAQA 144 AYLVTESVP VE G L + +PD L + + W HT A+ Sbjct 74 AYLVTESVP----QAVEPGEL---LTHFTWFPKPDRLSEEEFFHGWHVVHTPSSALLHPL 126 Query 145 TFGYTQNWVVRALTPEAPGIAGIVEELF 172 GY ++ V R LTP +P + IV E F Sbjct 127 RKGYVRDAVARTLTPGSPPVRAIVSEFF 154 >gi|322368548|ref|ZP_08043116.1| Ethyl tert-butyl ether degradation EthD [Haladaptatus paucihalophilus DX253] gi|320551832|gb|EFW93478.1| Ethyl tert-butyl ether degradation EthD [Haladaptatus paucihalophilus DX253] Length=240 Score = 37.4 bits (85), Expect = 1.7, Method: Compositional matrix adjust. Identities = 18/61 (30%), Positives = 32/61 (53%), Gaps = 3/61 (4%) Query 112 NIALLRRPDGLDQATWLTRWQRDHTQVAIEAQATFGYTQNWVVRALTPEAPGIAGIVEEL 171 ++ALL R D + ++ WQ +HT++A + + Y+ V +TP+A G+ E Sbjct 4 HVALLVRKDDMSHEEFVEYWQNNHTEIARDIEGVVKYS---TVLPVTPDAAEFDGLAELY 60 Query 172 F 172 F Sbjct 61 F 61 >gi|124268002|ref|YP_001022006.1| HupK protein [Methylibium petroleiphilum PM1] gi|124260777|gb|ABM95771.1| HupK protein [Methylibium petroleiphilum PM1] Length=388 Score = 36.2 bits (82), Expect = 3.4, Method: Compositional matrix adjust. Identities = 43/158 (28%), Positives = 64/158 (41%), Gaps = 31/158 (19%) Query 38 STVRDSLMTLTTLYPPVAAVVSLWTQQCYGEQVAAALRLLAQECDELGAYLVTESVPLTF 97 ++R+ L L +P AV S + E +AA Q C A L Sbjct 89 GSLREHLRRLCMDWPRQLAVSS------HREALAAQAMSQLQHCPAFVAPL--------L 134 Query 98 PSLVESGSRTPGLAN---IALLRRPDGLDQATWLTRWQRDHTQVAIEAQATFGYTQNWVV 154 PS +G PGL + A+LR P + WL RW+RD +IE G ++ W+ Sbjct 135 PSNTTAGEAIPGLLDWLQHAVLRMP----ASQWLARWERDPQAWSIE---WAGQSEGWLA 187 Query 155 RALTPEAPGIAGIVEELFPVAATTDLKAFFGAADDNDL 192 G+ + + + P A DL+ GAA +L Sbjct 188 ELFR----GMPAVADRVLPAA---DLEPHAGAASLREL 218 >gi|157869289|ref|XP_001683196.1| hypothetical protein [Leishmania major strain Friedlin] gi|68224080|emb|CAJ04087.1| conserved hypothetical protein [Leishmania major strain Friedlin] Length=1219 Score = 35.0 bits (79), Expect = 8.1, Method: Compositional matrix adjust. Identities = 24/66 (37%), Positives = 33/66 (50%), Gaps = 2/66 (3%) Query 18 QVADALLGLGVAGLSINVRDSTVRDSLMTLTTLYPPVAAVVSLWTQQCYGEQVAAALRLL 77 ++ D L G G S+ R ++ +L L +YPP+A V Q Y E VAA+LR Sbjct 105 ELEDFLEQRGGRGTSMEGRHKVIQKALSLLPVVYPPLAKVAE--PMQRYIEDVAASLRRA 162 Query 78 AQECDE 83 A E E Sbjct 163 ATEKAE 168 >gi|162448386|ref|YP_001610753.1| amidase [Sorangium cellulosum 'So ce 56'] gi|161158968|emb|CAN90273.1| putative amidase [Sorangium cellulosum 'So ce 56'] Length=581 Score = 35.0 bits (79), Expect = 8.2, Method: Compositional matrix adjust. Identities = 35/98 (36%), Positives = 44/98 (45%), Gaps = 26/98 (26%) Query 1 VLMRPEPDDD---WCARQRAQVADALLGLGVAGLSINVRDSTVRDSLMTLTTLYPPVAAV 57 V P+PDDD W A LG GV GL I V ++ RD+ PVA+V Sbjct 323 VASEPDPDDDLTAWAPPPPPGGFGARLGAGVRGLRIGVDEAEWRDAST-------PVASV 375 Query 58 VSLWTQQCYGEQVAAALRLLAQECDELGAYLVTESVPL 95 C+G ALR L +E GA LV ++PL Sbjct 376 -------CWG-----ALRALERE----GATLVDVTIPL 397 Lambda K H 0.320 0.133 0.399 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 294240045594 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40