BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv1875
Length=147
Score E
Sequences producing significant alignments: (Bits) Value
gi|15609012|ref|NP_216391.1| hypothetical protein Rv1875 [Mycoba... 296 8e-79
gi|342861213|ref|ZP_08717861.1| hypothetical protein MCOL_20116 ... 251 3e-65
gi|254819310|ref|ZP_05224311.1| hypothetical protein MintA_05263... 249 8e-65
gi|240170516|ref|ZP_04749175.1| hypothetical protein MkanA1_1448... 248 2e-64
gi|296164881|ref|ZP_06847437.1| pyridoxamine 5'-phosphate oxidas... 248 2e-64
gi|118618388|ref|YP_906720.1| hypothetical protein MUL_2996 [Myc... 239 8e-62
gi|41407690|ref|NP_960526.1| hypothetical protein MAP1592 [Mycob... 239 1e-61
gi|118462404|ref|YP_882023.1| pyridoxamine 5'-phosphate oxidase ... 237 5e-61
gi|145223177|ref|YP_001133855.1| pyridoxamine 5'-phosphate oxida... 213 5e-54
gi|226366115|ref|YP_002783898.1| hypothetical protein ROP_67060 ... 212 2e-53
gi|312199759|ref|YP_004019820.1| F420-dependent enzyme [Frankia ... 211 3e-53
gi|120404992|ref|YP_954821.1| pyridoxamine 5'-phosphate oxidase-... 207 3e-52
gi|288918664|ref|ZP_06413012.1| pyridoxamine 5'-phosphate oxidas... 198 2e-49
gi|331695444|ref|YP_004331683.1| putative F420-dependent enzyme ... 190 5e-47
gi|345012802|ref|YP_004815156.1| putative F420-dependent enzyme ... 190 7e-47
gi|111223072|ref|YP_713866.1| hypothetical protein FRAAL3662 [Fr... 189 2e-46
gi|158315862|ref|YP_001508370.1| pyridoxamine 5'-phosphate oxida... 186 7e-46
gi|169629628|ref|YP_001703277.1| hypothetical protein MAB_2542 [... 170 6e-41
gi|325003451|ref|ZP_08124563.1| F420-dependent enzyme [Pseudonoc... 150 9e-35
gi|302528882|ref|ZP_07281224.1| pyridoxamine 5'-phosphate oxidas... 145 3e-33
gi|300788515|ref|YP_003768806.1| hypothetical protein AMED_6678 ... 121 4e-26
gi|126435558|ref|YP_001071249.1| pyridoxamine 5'-phosphate oxida... 108 3e-22
gi|331697986|ref|YP_004334225.1| putative F420-dependent enzyme ... 75.5 2e-12
gi|27528794|emb|CAD29624.1| hypothetical protein [Streptomyces o... 73.2 1e-11
gi|290956401|ref|YP_003487583.1| hypothetical protein SCAB_18951... 68.2 4e-10
gi|312200749|ref|YP_004020810.1| F420-dependent enzyme [Frankia ... 68.2 5e-10
gi|288916168|ref|ZP_06410548.1| pyridoxamine 5'-phosphate oxidas... 67.8 6e-10
gi|302553129|ref|ZP_07305471.1| pyridoxamine 5'-phosphate oxidas... 67.8 6e-10
gi|159039473|ref|YP_001538726.1| pyridoxamine 5'-phosphate oxida... 67.4 6e-10
gi|21223675|ref|NP_629454.1| hypothetical protein SCO5312 [Strep... 67.0 9e-10
gi|256378274|ref|YP_003101934.1| pyridoxamine 5'-phosphate oxida... 66.6 1e-09
gi|108743476|dbj|BAE95579.1| conserved hypothetical protein [Str... 66.6 1e-09
gi|111223963|ref|YP_714757.1| hypothetical protein FRAAL4571 [Fr... 65.9 2e-09
gi|118472024|ref|YP_890788.1| pyridoxamine 5'-phosphate oxidase ... 65.9 2e-09
gi|226362574|ref|YP_002780352.1| hypothetical protein ROP_31600 ... 65.1 3e-09
gi|297560568|ref|YP_003679542.1| F420-dependent enzyme [Nocardio... 63.5 9e-09
gi|158315666|ref|YP_001508174.1| pyridoxamine 5'-phosphate oxida... 63.2 1e-08
gi|262202612|ref|YP_003273820.1| PPOX class F420-dependent enzym... 62.4 2e-08
gi|343924891|ref|ZP_08764427.1| hypothetical protein GOALK_029_0... 61.6 4e-08
gi|324998198|ref|ZP_08119310.1| putative pyridoxamine 5'-phospha... 59.3 2e-07
gi|134096729|ref|YP_001102390.1| pyridoxamine 5'-phosphate oxida... 58.2 4e-07
gi|169629681|ref|YP_001703330.1| putative pyridoxamine 5'-phosph... 58.2 4e-07
gi|258654947|ref|YP_003204103.1| pyridoxamine 5'-phosphate oxida... 57.8 5e-07
gi|291008461|ref|ZP_06566434.1| pyridoxamine 5'-phosphate oxidas... 57.0 9e-07
gi|269126226|ref|YP_003299596.1| pyridoxamine 5'-phosphate oxida... 57.0 1e-06
gi|291452763|ref|ZP_06592153.1| ATP binding protein [Streptomyce... 56.6 1e-06
gi|326381679|ref|ZP_08203373.1| putative F420-dependent enzyme [... 56.2 1e-06
gi|300790926|ref|YP_003771217.1| pyridoxamine 5'-phosphate oxida... 56.2 2e-06
gi|120406661|ref|YP_956490.1| pyridoxamine 5'-phosphate oxidase-... 55.5 2e-06
gi|326383442|ref|ZP_08205129.1| pyridoxamine 5'-phosphate oxidas... 55.5 2e-06
>gi|15609012|ref|NP_216391.1| hypothetical protein Rv1875 [Mycobacterium tuberculosis H37Rv]
gi|15841344|ref|NP_336381.1| hypothetical protein MT1924 [Mycobacterium tuberculosis CDC1551]
gi|31793065|ref|NP_855558.1| hypothetical protein Mb1906 [Mycobacterium bovis AF2122/97]
80 more sequence titles
Length=147
Score = 296 bits (757), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 147/147 (100%), Positives = 147/147 (100%), Gaps = 0/147 (0%)
Query 1 MTTLNEAAALAAAERGLAVVSTVRADGTVQASLVNVGLLPHPVSGEPSLGFTTYGKVKLG 60
MTTLNEAAALAAAERGLAVVSTVRADGTVQASLVNVGLLPHPVSGEPSLGFTTYGKVKLG
Sbjct 1 MTTLNEAAALAAAERGLAVVSTVRADGTVQASLVNVGLLPHPVSGEPSLGFTTYGKVKLG 60
Query 61 NLRARPQLAVTFRNGWQWATVEGRAQLVGPDDPRPWLVDGERLRLLLREVFTAAGGTHDD 120
NLRARPQLAVTFRNGWQWATVEGRAQLVGPDDPRPWLVDGERLRLLLREVFTAAGGTHDD
Sbjct 61 NLRARPQLAVTFRNGWQWATVEGRAQLVGPDDPRPWLVDGERLRLLLREVFTAAGGTHDD 120
Query 121 WDEYDRVMAQEQRAVVLITPTRIYSNG 147
WDEYDRVMAQEQRAVVLITPTRIYSNG
Sbjct 121 WDEYDRVMAQEQRAVVLITPTRIYSNG 147
>gi|342861213|ref|ZP_08717861.1| hypothetical protein MCOL_20116 [Mycobacterium colombiense CECT
3035]
gi|342131113|gb|EGT84394.1| hypothetical protein MCOL_20116 [Mycobacterium colombiense CECT
3035]
Length=147
Score = 251 bits (640), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 120/147 (82%), Positives = 132/147 (90%), Gaps = 0/147 (0%)
Query 1 MTTLNEAAALAAAERGLAVVSTVRADGTVQASLVNVGLLPHPVSGEPSLGFTTYGKVKLG 60
MTTL+EA ALA E GLAV+STVRAD TVQASLVNVGLLPHP +G+P LGFTTYG+VKL
Sbjct 1 MTTLDEAVALAKGESGLAVISTVRADATVQASLVNVGLLPHPANGQPVLGFTTYGRVKLA 60
Query 61 NLRARPQLAVTFRNGWQWATVEGRAQLVGPDDPRPWLVDGERLRLLLREVFTAAGGTHDD 120
NLRARPQLAVTFRNGWQWATVEGRA+L GPDD +PWL D ++LRLLLR+VF+AAGGTHDD
Sbjct 61 NLRARPQLAVTFRNGWQWATVEGRAELAGPDDTQPWLADADQLRLLLRDVFSAAGGTHDD 120
Query 121 WDEYDRVMAQEQRAVVLITPTRIYSNG 147
WDEYDRVMA E RAVVLI PTR+YSNG
Sbjct 121 WDEYDRVMAAEGRAVVLIAPTRVYSNG 147
>gi|254819310|ref|ZP_05224311.1| hypothetical protein MintA_05263 [Mycobacterium intracellulare
ATCC 13950]
Length=147
Score = 249 bits (637), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 121/147 (83%), Positives = 133/147 (91%), Gaps = 0/147 (0%)
Query 1 MTTLNEAAALAAAERGLAVVSTVRADGTVQASLVNVGLLPHPVSGEPSLGFTTYGKVKLG 60
MTTL +A ALAAAE GLAVVSTVRADGTVQASLVNVGLL HP +G+P LGFTTYG+VKL
Sbjct 1 MTTLRDAVALAAAENGLAVVSTVRADGTVQASLVNVGLLSHPANGQPVLGFTTYGRVKLA 60
Query 61 NLRARPQLAVTFRNGWQWATVEGRAQLVGPDDPRPWLVDGERLRLLLREVFTAAGGTHDD 120
NLRARPQLA+TFRNGWQWATVEGRA+LVGPDD +PWL D +RLR+LLR+VF AAGGTHD+
Sbjct 61 NLRARPQLAITFRNGWQWATVEGRAELVGPDDTQPWLTDPDRLRVLLRDVFVAAGGTHDN 120
Query 121 WDEYDRVMAQEQRAVVLITPTRIYSNG 147
WDEYDRVMA E RAVVLI PTR+YSNG
Sbjct 121 WDEYDRVMASEGRAVVLIAPTRVYSNG 147
>gi|240170516|ref|ZP_04749175.1| hypothetical protein MkanA1_14480 [Mycobacterium kansasii ATCC
12478]
Length=147
Score = 248 bits (634), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 122/147 (83%), Positives = 132/147 (90%), Gaps = 0/147 (0%)
Query 1 MTTLNEAAALAAAERGLAVVSTVRADGTVQASLVNVGLLPHPVSGEPSLGFTTYGKVKLG 60
MTTLN+A ALA AE+GLAVV+TVRADGTVQASLVNVGLL HP G+ LGFTTYGKVKL
Sbjct 1 MTTLNDAVALAVAEKGLAVVATVRADGTVQASLVNVGLLTHPAGGQTVLGFTTYGKVKLT 60
Query 61 NLRARPQLAVTFRNGWQWATVEGRAQLVGPDDPRPWLVDGERLRLLLREVFTAAGGTHDD 120
NLRARPQLAVTFRNGW WATVEGRA+LVGPDD +PWL DGE+LRLLLR+VF AAGGTHDD
Sbjct 61 NLRARPQLAVTFRNGWLWATVEGRAELVGPDDSQPWLRDGEQLRLLLRDVFIAAGGTHDD 120
Query 121 WDEYDRVMAQEQRAVVLITPTRIYSNG 147
WDEYDRVMA E+RAVVLI PTR+Y NG
Sbjct 121 WDEYDRVMAAERRAVVLIEPTRVYGNG 147
>gi|296164881|ref|ZP_06847437.1| pyridoxamine 5'-phosphate oxidase family protein [Mycobacterium
parascrofulaceum ATCC BAA-614]
gi|295899723|gb|EFG79173.1| pyridoxamine 5'-phosphate oxidase family protein [Mycobacterium
parascrofulaceum ATCC BAA-614]
Length=147
Score = 248 bits (634), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 121/147 (83%), Positives = 131/147 (90%), Gaps = 0/147 (0%)
Query 1 MTTLNEAAALAAAERGLAVVSTVRADGTVQASLVNVGLLPHPVSGEPSLGFTTYGKVKLG 60
MTTL +A ALA AE GLAVVSTVRADGTVQASLVNVGLL HP SGE LGFTTYGKVKL
Sbjct 1 MTTLRDAVALAEAENGLAVVSTVRADGTVQASLVNVGLLAHPASGEQVLGFTTYGKVKLA 60
Query 61 NLRARPQLAVTFRNGWQWATVEGRAQLVGPDDPRPWLVDGERLRLLLREVFTAAGGTHDD 120
NLRARPQLAVTFRNGWQWATVEGRA+L GPDD +PWL ++LRLLLR+VFTAAGGTHDD
Sbjct 61 NLRARPQLAVTFRNGWQWATVEGRAELAGPDDTQPWLTSDDQLRLLLRDVFTAAGGTHDD 120
Query 121 WDEYDRVMAQEQRAVVLITPTRIYSNG 147
WD YDRVMA+E+RAVVL+ PTR+YSNG
Sbjct 121 WDSYDRVMARERRAVVLVAPTRVYSNG 147
>gi|118618388|ref|YP_906720.1| hypothetical protein MUL_2996 [Mycobacterium ulcerans Agy99]
gi|183982764|ref|YP_001851055.1| hypothetical protein MMAR_2758 [Mycobacterium marinum M]
gi|118570498|gb|ABL05249.1| conserved protein [Mycobacterium ulcerans Agy99]
gi|183176090|gb|ACC41200.1| conserved protein [Mycobacterium marinum M]
Length=147
Score = 239 bits (611), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 117/147 (80%), Positives = 129/147 (88%), Gaps = 0/147 (0%)
Query 1 MTTLNEAAALAAAERGLAVVSTVRADGTVQASLVNVGLLPHPVSGEPSLGFTTYGKVKLG 60
MTTLN+A LA A+RGLAVVSTVRADGTVQASLVNVGLL HP G P+LGF TYGKVKL
Sbjct 1 MTTLNDAVGLATADRGLAVVSTVRADGTVQASLVNVGLLMHPDHGRPALGFATYGKVKLA 60
Query 61 NLRARPQLAVTFRNGWQWATVEGRAQLVGPDDPRPWLVDGERLRLLLREVFTAAGGTHDD 120
NLRARPQLAVTFRNGW+WATVEG A+L GPDD +PWL D E+LRLLLR+VF +AGGTHD+
Sbjct 61 NLRARPQLAVTFRNGWRWATVEGGAELAGPDDSQPWLADREQLRLLLRDVFISAGGTHDN 120
Query 121 WDEYDRVMAQEQRAVVLITPTRIYSNG 147
WDEYDRVMA+E+R VVLI PTRIY NG
Sbjct 121 WDEYDRVMAEERRTVVLIEPTRIYGNG 147
>gi|41407690|ref|NP_960526.1| hypothetical protein MAP1592 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|254775312|ref|ZP_05216828.1| hypothetical protein MaviaA2_11661 [Mycobacterium avium subsp.
avium ATCC 25291]
gi|41396043|gb|AAS03909.1| hypothetical protein MAP_1592 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|336457529|gb|EGO36535.1| PPOX class probable enzyme [Mycobacterium avium subsp. paratuberculosis
S397]
Length=147
Score = 239 bits (609), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 122/147 (83%), Positives = 135/147 (92%), Gaps = 0/147 (0%)
Query 1 MTTLNEAAALAAAERGLAVVSTVRADGTVQASLVNVGLLPHPVSGEPSLGFTTYGKVKLG 60
MTTL++A ALAAAE GLAV+STVRAD TVQASLVNVG L HP +G+P LGFTTYGKVKL
Sbjct 1 MTTLDDAVALAAAENGLAVISTVRADQTVQASLVNVGRLAHPANGQPVLGFTTYGKVKLA 60
Query 61 NLRARPQLAVTFRNGWQWATVEGRAQLVGPDDPRPWLVDGERLRLLLREVFTAAGGTHDD 120
NLRARPQLAVTFRNGWQWATVEGRA+LVGPDD +PWL D +RLR+LLREVFTAAGG+HDD
Sbjct 61 NLRARPQLAVTFRNGWQWATVEGRAELVGPDDAQPWLTDADRLRMLLREVFTAAGGSHDD 120
Query 121 WDEYDRVMAQEQRAVVLITPTRIYSNG 147
WDEYDRVMA+E+RAVVLI PTR+YSNG
Sbjct 121 WDEYDRVMARERRAVVLIAPTRVYSNG 147
>gi|118462404|ref|YP_882023.1| pyridoxamine 5'-phosphate oxidase [Mycobacterium avium 104]
gi|118163691|gb|ABK64588.1| pyridoxamine 5'-phosphate oxidase family protein [Mycobacterium
avium 104]
Length=147
Score = 237 bits (604), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 122/147 (83%), Positives = 134/147 (92%), Gaps = 0/147 (0%)
Query 1 MTTLNEAAALAAAERGLAVVSTVRADGTVQASLVNVGLLPHPVSGEPSLGFTTYGKVKLG 60
MTTL++A ALAAAE GLAV+STVRAD TVQASLVNVG L HP +G+P LGFTTYGKVK
Sbjct 1 MTTLDDAVALAAAENGLAVISTVRADQTVQASLVNVGRLAHPANGQPVLGFTTYGKVKRA 60
Query 61 NLRARPQLAVTFRNGWQWATVEGRAQLVGPDDPRPWLVDGERLRLLLREVFTAAGGTHDD 120
NLRARPQLAVTFRNGWQWATVEGRA+LVGPDD +PWL D +RLRLLLREVFTAAGG+HDD
Sbjct 61 NLRARPQLAVTFRNGWQWATVEGRAELVGPDDAQPWLTDADRLRLLLREVFTAAGGSHDD 120
Query 121 WDEYDRVMAQEQRAVVLITPTRIYSNG 147
WDEYDRVMA+E+RAVVLI PTR+YSNG
Sbjct 121 WDEYDRVMARERRAVVLIAPTRVYSNG 147
>gi|145223177|ref|YP_001133855.1| pyridoxamine 5'-phosphate oxidase-like protein [Mycobacterium
gilvum PYR-GCK]
gi|315443634|ref|YP_004076513.1| pyridoxamine 5'-phosphate oxidase [Mycobacterium sp. Spyr1]
gi|145215663|gb|ABP45067.1| pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein
[Mycobacterium gilvum PYR-GCK]
gi|315261937|gb|ADT98678.1| Pyridoxamine 5'-phosphate oxidase [Mycobacterium sp. Spyr1]
Length=147
Score = 213 bits (543), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 101/147 (69%), Positives = 120/147 (82%), Gaps = 0/147 (0%)
Query 1 MTTLNEAAALAAAERGLAVVSTVRADGTVQASLVNVGLLPHPVSGEPSLGFTTYGKVKLG 60
MTTL++A ALA + GLAVVST+RAD T+Q+SL+N G LPHP G P LGF TYGKVKL
Sbjct 1 MTTLHDAYALARNDNGLAVVSTLRADLTIQSSLINAGPLPHPGDGNPVLGFVTYGKVKLA 60
Query 61 NLRARPQLAVTFRNGWQWATVEGRAQLVGPDDPRPWLVDGERLRLLLREVFTAAGGTHDD 120
NLRARPQ+AVTF+ GWQWATVEGRA+L GPDDP+PWL L LLLR++FTAAGGTHD+
Sbjct 61 NLRARPQIAVTFQRGWQWATVEGRAELAGPDDPQPWLGSDYELALLLRDIFTAAGGTHDN 120
Query 121 WDEYDRVMAQEQRAVVLITPTRIYSNG 147
WDEYD M +++R VL+TPTR+Y NG
Sbjct 121 WDEYDATMREQRRVAVLVTPTRVYGNG 147
>gi|226366115|ref|YP_002783898.1| hypothetical protein ROP_67060 [Rhodococcus opacus B4]
gi|226244605|dbj|BAH54953.1| hypothetical protein [Rhodococcus opacus B4]
Length=156
Score = 212 bits (539), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 101/146 (70%), Positives = 118/146 (81%), Gaps = 1/146 (0%)
Query 1 MTTLNEAAALAAAERGLAVVSTVRADGTVQASLVNVGLLPHPVSGEPSLGFTTYGKVKLG 60
MTTL EA LA A++GLAVV+T+RADGT+Q+S+VN G+L HPV+GE L F +GKVKL
Sbjct 1 MTTLQEAFELARADQGLAVVATLRADGTIQSSVVNTGVLEHPVTGETVLAFVAHGKVKLA 60
Query 61 NLRARPQLAVTFRNGWQWATVEGRAQLVGPDDPRPWLVDGERLRLLLREVFTAAGGTHDD 120
NLR RPQ TFR GWQWATVEGRA+L GPDDP+PWL D ERLRLLLRE+F AAGGTHDD
Sbjct 61 NLRTRPQATTTFRRGWQWATVEGRAELAGPDDPQPWL-DSERLRLLLREIFVAAGGTHDD 119
Query 121 WDEYDRVMAQEQRAVVLITPTRIYSN 146
W E+DRVM ++R VL+ P RIYSN
Sbjct 120 WSEFDRVMDADRRTAVLVRPDRIYSN 145
>gi|312199759|ref|YP_004019820.1| F420-dependent enzyme [Frankia sp. EuI1c]
gi|311231095|gb|ADP83950.1| putative F420-dependent enzyme [Frankia sp. EuI1c]
Length=148
Score = 211 bits (537), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 100/146 (69%), Positives = 122/146 (84%), Gaps = 1/146 (0%)
Query 1 MTTLNEAAALAAAERGLAVVSTVRADGTVQASLVNVGLLPHPVSGEPSLGFTTYGKVKLG 60
MTT++E AAL E+GLAV+ST RAD T+Q+S+VNVG+L HP++G+ LGF TYG VKL
Sbjct 1 MTTIDELAALGREEQGLAVISTARADQTIQSSVVNVGVLAHPLTGKDVLGFVTYGPVKLA 60
Query 61 NLRARPQLAVTFRNGWQWATVEGRAQLVGPDDPRPWLVDGERLRLLLREVFTAAGGTHDD 120
NLRARPQ+ T R+GW+WA +EG AQL+GPDDP P +D ERLRLLLREVFTAAGGTHDD
Sbjct 61 NLRARPQVTATIRSGWRWAALEGTAQLIGPDDPHP-DIDAERLRLLLREVFTAAGGTHDD 119
Query 121 WDEYDRVMAQEQRAVVLITPTRIYSN 146
WD YDRVMA+++RA VLI P+R+YSN
Sbjct 120 WDTYDRVMAEQRRAAVLIEPSRVYSN 145
>gi|120404992|ref|YP_954821.1| pyridoxamine 5'-phosphate oxidase-like protein [Mycobacterium
vanbaalenii PYR-1]
gi|119957810|gb|ABM14815.1| pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein
[Mycobacterium vanbaalenii PYR-1]
Length=147
Score = 207 bits (528), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 98/147 (67%), Positives = 119/147 (81%), Gaps = 0/147 (0%)
Query 1 MTTLNEAAALAAAERGLAVVSTVRADGTVQASLVNVGLLPHPVSGEPSLGFTTYGKVKLG 60
MT L +A ALA + GLAVVST+RAD T+Q+SL+N G LPHP +G P LGF TYG+VKL
Sbjct 1 MTPLEDAFALAVNDNGLAVVSTLRADLTIQSSLINAGPLPHPATGLPVLGFVTYGRVKLA 60
Query 61 NLRARPQLAVTFRNGWQWATVEGRAQLVGPDDPRPWLVDGERLRLLLREVFTAAGGTHDD 120
NL+ARPQ+AVTFR GW+WATVEGRA+L GPD P+PWL + L LLR++FTAAGGTHD+
Sbjct 61 NLQARPQIAVTFRRGWEWATVEGRAELAGPDHPQPWLGSDDTLPRLLRDIFTAAGGTHDN 120
Query 121 WDEYDRVMAQEQRAVVLITPTRIYSNG 147
WDEYDR M +++R VL+TPTRIY NG
Sbjct 121 WDEYDRTMREQRRTAVLVTPTRIYGNG 147
>gi|288918664|ref|ZP_06413012.1| pyridoxamine 5'-phosphate oxidase-related FMN-binding protein
[Frankia sp. EUN1f]
gi|288349962|gb|EFC84191.1| pyridoxamine 5'-phosphate oxidase-related FMN-binding protein
[Frankia sp. EUN1f]
Length=145
Score = 198 bits (504), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 94/146 (65%), Positives = 116/146 (80%), Gaps = 1/146 (0%)
Query 1 MTTLNEAAALAAAERGLAVVSTVRADGTVQASLVNVGLLPHPVSGEPSLGFTTYGKVKLG 60
M T+++ AAL E GLAVVST+RAD ++Q+S+VNVG+L HP++ P +GF TYG+VKL
Sbjct 1 MATIDDLAALGREESGLAVVSTLRADQSIQSSVVNVGVLLHPLNATPVVGFVTYGRVKLA 60
Query 61 NLRARPQLAVTFRNGWQWATVEGRAQLVGPDDPRPWLVDGERLRLLLREVFTAAGGTHDD 120
NLRARP L VT R+GW+W T EG AQL+GPDDPRP +D ERLRLLLREVF AAGGTHDD
Sbjct 61 NLRARPALTVTVRSGWRWVTAEGEAQLIGPDDPRP-DIDAERLRLLLREVFVAAGGTHDD 119
Query 121 WDEYDRVMAQEQRAVVLITPTRIYSN 146
W YDRVMA+++R V + P R+YSN
Sbjct 120 WATYDRVMAEQRRTAVFLAPRRLYSN 145
>gi|331695444|ref|YP_004331683.1| putative F420-dependent enzyme [Pseudonocardia dioxanivorans
CB1190]
gi|326950133|gb|AEA23830.1| putative F420-dependent enzyme [Pseudonocardia dioxanivorans
CB1190]
Length=146
Score = 190 bits (483), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 92/146 (64%), Positives = 113/146 (78%), Gaps = 1/146 (0%)
Query 1 MTTLNEAAALAAAERGLAVVSTVRADGTVQASLVNVGLLPHPVSGEPSLGFTTYGKVKLG 60
MT LN +LAA E LAVVS RADG+V +SLVN G + HPV+GE +G+ TYG+VKL
Sbjct 1 MTELNAVWSLAARESYLAVVSITRADGSVHSSLVNAGPVRHPVTGEAVVGYVTYGRVKLA 60
Query 61 NLRARPQLAVTFRNGWQWATVEGRAQLVGPDDPRPWLVDGERLRLLLREVFTAAGGTHDD 120
NLR RP A++FR+GW+WAT+EG +++GPDDP VD ERLRLLLREVF AGG+HDD
Sbjct 61 NLRERPASALSFRSGWKWATIEGTCEIIGPDDPADG-VDDERLRLLLREVFAGAGGSHDD 119
Query 121 WDEYDRVMAQEQRAVVLITPTRIYSN 146
WD YDRVM +E+RA VL+TPTR+Y N
Sbjct 120 WDAYDRVMREERRAAVLMTPTRVYGN 145
>gi|345012802|ref|YP_004815156.1| putative F420-dependent enzyme [Streptomyces violaceusniger Tu
4113]
gi|344039151|gb|AEM84876.1| putative F420-dependent enzyme [Streptomyces violaceusniger Tu
4113]
Length=157
Score = 190 bits (482), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 90/146 (62%), Positives = 110/146 (76%), Gaps = 1/146 (0%)
Query 1 MTTLNEAAALAAAERGLAVVSTVRADGTVQASLVNVGLLPHPVSGEPSLGFTTYGKVKLG 60
MT L E +A A+ LAVV+T RAD +VQAS+VN G++ HPVSGEP + F TYG+ KL
Sbjct 13 MTDLQEVDRIATADHHLAVVTTTRADCSVQASVVNAGVIGHPVSGEPVVAFVTYGRAKLA 72
Query 61 NLRARPQLAVTFRNGWQWATVEGRAQLVGPDDPRPWLVDGERLRLLLREVFTAAGGTHDD 120
+LRARP+ V FR GW WA VEGR ++ GPDDP P VD ERLRLLLRE+FTAAGG HDD
Sbjct 73 HLRARPRATVVFRAGWNWAAVEGRTEIAGPDDPFPG-VDQERLRLLLREIFTAAGGAHDD 131
Query 121 WDEYDRVMAQEQRAVVLITPTRIYSN 146
W YDRVMA+++RA + + P R+YSN
Sbjct 132 WGAYDRVMAEQRRAAIFVHPERVYSN 157
>gi|111223072|ref|YP_713866.1| hypothetical protein FRAAL3662 [Frankia alni ACN14a]
gi|111150604|emb|CAJ62305.1| conserved hypothetical protein; putative pyridoxamine-phosphate
domain [Frankia alni ACN14a]
Length=145
Score = 189 bits (479), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 90/144 (63%), Positives = 113/144 (79%), Gaps = 1/144 (0%)
Query 1 MTTLNEAAALAAAERGLAVVSTVRADGTVQASLVNVGLLPHPVSGEPSLGFTTYGKVKLG 60
MT+ +AAAL+ AE GLAV+ST+R DG +QAS+VN+ + HP++ + F TYG VKL
Sbjct 1 MTSFEDAAALSRAESGLAVISTLRDDGGIQASVVNIAFMRHPLTDIEVVAFVTYGAVKLA 60
Query 61 NLRARPQLAVTFRNGWQWATVEGRAQLVGPDDPRPWLVDGERLRLLLREVFTAAGGTHDD 120
+LRARPQ + T R+GW+WATVEG A+++GPDDPRP VD RLRLLLREVF AAGGTHDD
Sbjct 61 HLRARPQASATVRSGWRWATVEGVAEIIGPDDPRPG-VDAVRLRLLLREVFLAAGGTHDD 119
Query 121 WDEYDRVMAQEQRAVVLITPTRIY 144
W YDRVMA+++R V +TPTRIY
Sbjct 120 WHTYDRVMAEQRRTAVFLTPTRIY 143
>gi|158315862|ref|YP_001508370.1| pyridoxamine 5'-phosphate oxidase-like protein [Frankia sp. EAN1pec]
gi|158111267|gb|ABW13464.1| pyridoxamine 5'-phosphate oxidase-related FMN-binding [Frankia
sp. EAN1pec]
Length=169
Score = 186 bits (473), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 91/146 (63%), Positives = 110/146 (76%), Gaps = 6/146 (4%)
Query 4 LNEAAALAAAERGLAVVSTVRADGTVQASLVNVGLLPHPVSGEPS-----LGFTTYGKVK 58
AA L AE GLAV+ST RADG++QAS+VN +PHP+ +P + F TYG+ K
Sbjct 23 FEAAAELGRAESGLAVISTSRADGSIQASVVNAAFMPHPLPPDPREPAPVVAFVTYGRTK 82
Query 59 LGNLRARPQLAVTFRNGWQWATVEGRAQLVGPDDPRPWLVDGERLRLLLREVFTAAGGTH 118
L NLR RP+++ TFR GW+WATVEG A++VGPDDP VD ERLRLLLRE+FTAAGGTH
Sbjct 83 LANLRRRPRVSATFRAGWRWATVEGTAEIVGPDDPHD-QVDAERLRLLLREIFTAAGGTH 141
Query 119 DDWDEYDRVMAQEQRAVVLITPTRIY 144
DDWD YDRVMA+++RA VLI PTR Y
Sbjct 142 DDWDTYDRVMAEQRRAAVLIHPTRAY 167
>gi|169629628|ref|YP_001703277.1| hypothetical protein MAB_2542 [Mycobacterium abscessus ATCC 19977]
gi|169241595|emb|CAM62623.1| Conserved hypothetical protein (Pyridoxamine 5'-phosphate oxidase-related,
FMN-binding?) [Mycobacterium abscessus]
Length=150
Score = 170 bits (431), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 83/147 (57%), Positives = 106/147 (73%), Gaps = 2/147 (1%)
Query 1 MTTLNEAAALAAAERGLAVVSTVRADGTVQASLVNVGLLPHPVSGEPSLGFTTYGKV-KL 59
MT ++ + L A + GL V+STVR DG+VQ+S++N G++PHP +G+P + G KL
Sbjct 1 MTGISAFSDLVARDHGLCVLSTVRRDGSVQSSVINAGVMPHPRTGDPIVALVAAGGTRKL 60
Query 60 GNLRARPQLAVTFRNGWQWATVEGRAQLVGPDDPRPWLVDGERLRLLLREVFTAAGGTHD 119
+LR P+ + R GWQW TVEG A+++GPDDP P VD E LRLLLR +F +AGGTHD
Sbjct 61 DHLRTDPRTTIVVRAGWQWTTVEGIAEIIGPDDPAPG-VDAESLRLLLRRIFESAGGTHD 119
Query 120 DWDEYDRVMAQEQRAVVLITPTRIYSN 146
DWD YDRVMA E+RA VLITP RIYSN
Sbjct 120 DWDTYDRVMAAERRAAVLITPRRIYSN 146
>gi|325003451|ref|ZP_08124563.1| F420-dependent enzyme [Pseudonocardia sp. P1]
Length=144
Score = 150 bits (378), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 72/143 (51%), Positives = 95/143 (67%), Gaps = 4/143 (2%)
Query 4 LNEAAALAAAERGLAVVSTVRADGTVQASLVNVGLLPHPVSGEPSLGFTTYGKVKLGNLR 63
L+ + A + GL V+ VR DG SLVN G+L HPV+G P + TYG VKL LR
Sbjct 5 LDPVRRIVAEDSGLCTVAVVRPDGRPHTSLVNAGVLDHPVTGSPVAAYVTYGPVKLQALR 64
Query 64 ARPQLAVTFRNGWQWATVEGRAQLVGPDDPRPWLVDGERLRLLLREVFTAAGGTHDDWDE 123
RP ++ +R+GW+W VEG ++++GPDDP VDG + LLR+VF A GGTHDDW E
Sbjct 65 TRPATSLHWRSGWRWVAVEGSSEIIGPDDP----VDGVDVPRLLRDVFAACGGTHDDWAE 120
Query 124 YDRVMAQEQRAVVLITPTRIYSN 146
YDRVMA+++RA VL+ P R+ N
Sbjct 121 YDRVMAEQRRAAVLVEPVRVVGN 143
>gi|302528882|ref|ZP_07281224.1| pyridoxamine 5'-phosphate oxidase [Streptomyces sp. AA4]
gi|302437777|gb|EFL09593.1| pyridoxamine 5'-phosphate oxidase [Streptomyces sp. AA4]
Length=148
Score = 145 bits (365), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 82/147 (56%), Positives = 96/147 (66%), Gaps = 4/147 (2%)
Query 3 TLNEAAALAAAERGLAVVSTVRADGTVQASLVNVGLLPHPVSGEPSLGFTTYGKV-KLGN 61
TL + AL E GLA V+T RADGTV AS+VN G+L PV+G+PS+GF G KL
Sbjct 4 TLEQLRALTVEENGLATVATTRADGTVHASVVNAGILDDPVTGKPSVGFVAVGGAHKLTL 63
Query 62 LRARPQLAVTFRNGWQWATVEGRAQLVGPDDPRP-WLVDGERLRLLLREVFTAAGGTHDD 120
LR VTFR GW+W +V G +L+GPDDP P + DG L LLREVF AA GTHDD
Sbjct 64 LRRNGHATVTFRRGWRWLSVTGPVRLIGPDDPDPSFPADG--LPPLLREVFRAATGTHDD 121
Query 121 WDEYDRVMAQEQRAVVLITPTRIYSNG 147
W EYDRVMA E+RA V + RI NG
Sbjct 122 WAEYDRVMAAERRAAVFVEVGRIIGNG 148
>gi|300788515|ref|YP_003768806.1| hypothetical protein AMED_6678 [Amycolatopsis mediterranei U32]
gi|299798029|gb|ADJ48404.1| conserved hypothetical protein [Amycolatopsis mediterranei U32]
gi|340530120|gb|AEK45325.1| hypothetical protein RAM_34260 [Amycolatopsis mediterranei S699]
Length=148
Score = 121 bits (303), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 76/144 (53%), Positives = 89/144 (62%), Gaps = 2/144 (1%)
Query 4 LNEAAALAAAERGLAVVSTVRADGTVQASLVNVGLLPHPVSGEPSLGFTTYGKV-KLGNL 62
L + L+ E GLA V+T RADGTV AS+VNVG+L PV+G P + + GK KL L
Sbjct 5 LEQVRTLSLQEHGLATVATTRADGTVHASVVNVGVLDDPVTGAPGVAYVAVGKAHKLLLL 64
Query 63 RARPQLAVTFRNGWQWATVEGRAQLVGPDDPRPWLVDGERLRLLLREVFTAAGGTHDDWD 122
R VTFR GW W +V G L+GPDDP P D L LLR+VF AA GTHDDW
Sbjct 65 RRAGHATVTFRRGWNWLSVTGATHLIGPDDPDP-AFDPAGLPQLLRDVFIAATGTHDDWA 123
Query 123 EYDRVMAQEQRAVVLITPTRIYSN 146
EYDRVMA+E+R V I RI N
Sbjct 124 EYDRVMAEERRVAVFIRADRIIGN 147
>gi|126435558|ref|YP_001071249.1| pyridoxamine 5'-phosphate oxidase-like protein [Mycobacterium
sp. JLS]
gi|126235358|gb|ABN98758.1| pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein
[Mycobacterium sp. JLS]
Length=168
Score = 108 bits (270), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 56/110 (51%), Positives = 76/110 (70%), Gaps = 2/110 (1%)
Query 1 MTTLNEAAALAAAERGLAVVSTVRADGTVQASLVNVGLLPHPVSGEPSLGFTTYG-KVKL 59
MT L+E L + + GL V ST+R DG++Q+++VN G+L HPV+ P +G G +KL
Sbjct 1 MTDLSEFTGLISRDHGLCVFSTLRRDGSIQSTVVNAGVLAHPVTRTPVVGLVAAGGSLKL 60
Query 60 GNLRARPQLAVTFRNGWQWATVEGRAQLVGPDDPRPWLVDGERLRLLLRE 109
NLRA P+ V R GWQWA+VEGR +L+GPDDP P +DG+ LR LLR+
Sbjct 61 RNLRADPRATVAARAGWQWASVEGRGELIGPDDPYPG-IDGDGLRNLLRD 109
>gi|331697986|ref|YP_004334225.1| putative F420-dependent enzyme [Pseudonocardia dioxanivorans
CB1190]
gi|326952675|gb|AEA26372.1| putative F420-dependent enzyme [Pseudonocardia dioxanivorans
CB1190]
Length=143
Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/135 (40%), Positives = 74/135 (55%), Gaps = 12/135 (8%)
Query 13 AERGLAVVSTVRADGTVQASLVNVGLLPHPVSGEPSLGFTTYGKVKLGNLRARPQ--LAV 70
AE L V++T+++DG Q S V S+ T G+ K NLR P+ L V
Sbjct 13 AESRLGVLATIKSDGRPQLSPVTPFYDREAGVVRVSM---TEGRAKTANLRRDPRATLEV 69
Query 71 TFRNGWQWATVEGRAQLVGP-DDPRPWLVDGERLRLLLREVFTAAGGTHDDWDEYDRVMA 129
T +GW WATVEG A LVGP DP DG ++ L+ E + +A G H DWDEY RVM
Sbjct 70 TSADGWGWATVEGVATLVGPGTDP-----DGPEVQALV-EYYRSAAGEHPDWDEYRRVMV 123
Query 130 QEQRAVVLITPTRIY 144
++R ++ +T +Y
Sbjct 124 DDRRVLMTMTVDHVY 138
>gi|27528794|emb|CAD29624.1| hypothetical protein [Streptomyces olivaceoviridis]
Length=272
Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/143 (40%), Positives = 75/143 (53%), Gaps = 15/143 (10%)
Query 1 MTTLNEAAALAAAERGLAVVSTVRADGTVQASLVNVGLLPHPVSGEPSLGFTTY-GKVKL 59
MT + AL A R L V++T+++DG Q S V LPH + +TY G K+
Sbjct 1 MTAPFDPRALLAGSR-LGVLATIKSDGRPQLSPV----LPHYDESADVIRVSTYAGAAKV 55
Query 60 GNLRARPQ--LAVTFRNGWQWATVEGRAQLVGP-DDPRPWLVDGERLRLLLREVFTAAGG 116
NLR P+ L VT +G WAT EG A L GP DP DG + L+ + AA G
Sbjct 56 ANLRRDPRATLEVTGSDGMSWATAEGVATLTGPGTDP-----DGPEVDALV-HYYRAAAG 109
Query 117 THDDWDEYDRVMAQEQRAVVLIT 139
H DWDEY VM E+R ++ +T
Sbjct 110 EHPDWDEYRAVMVAERRVLITMT 132
>gi|290956401|ref|YP_003487583.1| hypothetical protein SCAB_18951 [Streptomyces scabiei 87.22]
gi|260645927|emb|CBG69018.1| conserved hypothetical protein [Streptomyces scabiei 87.22]
Length=143
Score = 68.2 bits (165), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/143 (40%), Positives = 75/143 (53%), Gaps = 21/143 (14%)
Query 9 ALAAAERGLAVVSTVRADGTVQASLVNVGLLPHPVSGEPSLGF----TTYGKVKLGNLRA 64
AL A R L V++T++ADG Q S V +P S + G TT K NLR
Sbjct 10 ALLAKSR-LGVLATLKADGRPQLSPV----MP---SYDQEAGVIRISTTEATAKTANLRR 61
Query 65 RPQ--LAVTFRNGWQWATVEGRAQLVGP-DDPRPWLVDGERLRLLLREVFTAAGGTHDDW 121
P+ L VT +G WAT EG +LVGP DP G +R L+ + + AA G H DW
Sbjct 62 DPRAALEVTSADGMSWATAEGTVRLVGPGTDP-----GGPEVRALV-DYYRAAAGEHPDW 115
Query 122 DEYDRVMAQEQRAVVLITPTRIY 144
DEY VM E+R +V++T +Y
Sbjct 116 DEYRAVMVSERRVLVVLTVDHVY 138
>gi|312200749|ref|YP_004020810.1| F420-dependent enzyme [Frankia sp. EuI1c]
gi|311232085|gb|ADP84940.1| putative F420-dependent enzyme [Frankia sp. EuI1c]
Length=143
Score = 68.2 bits (165), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/136 (39%), Positives = 72/136 (53%), Gaps = 14/136 (10%)
Query 13 AERGLAVVSTVRADGTVQASLVNVGLLPHPVSGEPSLGFT-TYGKVKLGNLRARPQ--LA 69
AE L V++T+R+DG Q S V LP G L + T G+ K NLR P+ L
Sbjct 13 AESRLGVLATIRSDGRPQLSPV----LPFYDRGSGVLYVSMTEGRAKTANLRRDPRAALE 68
Query 70 VTFRNGWQWATVEGRAQLVGPD-DPRPWLVDGERLRLLLREVFTAAGGTHDDWDEYDRVM 128
VT +G WAT EG LVGP DP G ++ L+ + + AA G H DWDEY VM
Sbjct 69 VTRPDGRAWATAEGAVTLVGPGADPH-----GSEVQALV-DYYRAAAGEHPDWDEYRSVM 122
Query 129 AQEQRAVVLITPTRIY 144
++R ++ +T +Y
Sbjct 123 VADRRVLMRMTVDHVY 138
>gi|288916168|ref|ZP_06410548.1| pyridoxamine 5'-phosphate oxidase-related FMN-binding protein
[Frankia sp. EUN1f]
gi|288352359|gb|EFC86556.1| pyridoxamine 5'-phosphate oxidase-related FMN-binding protein
[Frankia sp. EUN1f]
Length=143
Score = 67.8 bits (164), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/150 (36%), Positives = 71/150 (48%), Gaps = 18/150 (12%)
Query 1 MTTLNEAAALAAAERGLAVVSTVRADGTVQASLVNVGLLPHPVSGEPS---LGFTTYGKV 57
MTT AE L V++T++ADG Q S V P P+ T G+
Sbjct 1 MTTTPFDPHTLLAESRLGVLATIKADGLPQLSPVL------PFYDRPAGVLYVSMTEGRA 54
Query 58 KLGNLRARPQ--LAVTFRNGWQWATVEGRAQLVGP-DDPRPWLVDGERLRLLLREVFTAA 114
K NLR P+ L VT +GW WAT EG LVGP DP G + L+ + + A
Sbjct 55 KTANLRRDPRAALEVTSPDGWAWATAEGTVTLVGPGTDPH-----GPEVEALV-DYYRLA 108
Query 115 GGTHDDWDEYDRVMAQEQRAVVLITPTRIY 144
G H DWDEY M ++R ++ +T +Y
Sbjct 109 AGDHPDWDEYRSTMVSDRRVLMTMTVDHVY 138
>gi|302553129|ref|ZP_07305471.1| pyridoxamine 5'-phosphate oxidase [Streptomyces viridochromogenes
DSM 40736]
gi|302470747|gb|EFL33840.1| pyridoxamine 5'-phosphate oxidase [Streptomyces viridochromogenes
DSM 40736]
Length=143
Score = 67.8 bits (164), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/149 (37%), Positives = 73/149 (49%), Gaps = 20/149 (13%)
Query 2 TTLNEAAALAAAERGLAVVSTVRADGTVQASLVNVGLLPHPVSGEPSLGF---TTYGKVK 58
T+ N A LA ++ G V++T++ADG Q S V P E + T+ G K
Sbjct 4 TSFNPHALLAKSQIG--VLATIKADGRPQLSPVQ------PFYDESANVIHVSTSAGAAK 55
Query 59 LGNLR--ARPQLAVTFRNGWQWATVEGRAQLVGP-DDPRPWLVDGERLRLLLREVFTAAG 115
+ NLR AR L VT +G WAT EG A L GP DP VD L + A
Sbjct 56 VANLRRDARATLEVTSPDGMSWATAEGIATLTGPGTDPHGPEVDA------LVNYYRVAA 109
Query 116 GTHDDWDEYDRVMAQEQRAVVLITPTRIY 144
G H DW+EY VM ++R ++ +T +Y
Sbjct 110 GEHPDWEEYRAVMVSDRRVLITMTVDHVY 138
>gi|159039473|ref|YP_001538726.1| pyridoxamine 5'-phosphate oxidase-like FMN-binding protein [Salinispora
arenicola CNS-205]
gi|157918308|gb|ABV99735.1| pyridoxamine 5'-phosphate oxidase-related FMN-binding [Salinispora
arenicola CNS-205]
Length=145
Score = 67.4 bits (163), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/138 (38%), Positives = 69/138 (50%), Gaps = 18/138 (13%)
Query 13 AERGLAVVSTVRADGTVQASLVNVGLLPHPVSGEPSLGFTTYGKVKLGNLRARPQLA--V 70
AER + V++T+R DG Q S V G P E T G+ K+ NLR P+++ V
Sbjct 14 AERQMGVLATLRRDGRAQLSTVLYGYDP---GAELIRISATDGRAKVANLRRDPRVSFHV 70
Query 71 TFRNGWQWATVEGRAQLVG----PDDPRPWLVDGERLRLLLREVFTAAGGTHDDWDEYDR 126
+GW +A EGRA+L PDDP E L L R A G H DWD+Y R
Sbjct 71 GSADGWAYAVAEGRAELTPVAERPDDP-----TVEELVALYR----ALQGEHPDWDDYRR 121
Query 127 VMAQEQRAVVLITPTRIY 144
M E+R V+ + R+Y
Sbjct 122 AMVAERRVVLRLHVERVY 139
>gi|21223675|ref|NP_629454.1| hypothetical protein SCO5312 [Streptomyces coelicolor A3(2)]
gi|289769103|ref|ZP_06528481.1| conserved hypothetical protein [Streptomyces lividans TK24]
gi|5139594|emb|CAB45612.1| conserved hypothetical protein [Streptomyces coelicolor A3(2)]
gi|289699302|gb|EFD66731.1| conserved hypothetical protein [Streptomyces lividans TK24]
Length=144
Score = 67.0 bits (162), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/139 (39%), Positives = 71/139 (52%), Gaps = 20/139 (14%)
Query 13 AERGLAVVSTVRADGTVQASLVNVGLLPHPVSGEPSLGF----TTYGKVKLGNLRARPQ- 67
AE L V++T+++DG Q S V +P + +P G T G K NLR P+
Sbjct 14 AESRLGVLATIKSDGRPQLSPV----MP---AYDPEAGVIRVSTREGLAKTANLRRDPRA 66
Query 68 -LAVTFRNGWQWATVEGRAQLVGPD-DPRPWLVDGERLRLLLREVFTAAGGTHDDWDEYD 125
L VT +G WAT EG A L GP DP G + L+ E + AA G H DWDEY
Sbjct 67 ALEVTAPDGRSWATAEGVATLTGPGADPH-----GPEVEALV-EYYRAAAGEHPDWDEYR 120
Query 126 RVMAQEQRAVVLITPTRIY 144
M ++R ++ IT R+Y
Sbjct 121 STMVSDRRVLLTITVERVY 139
>gi|256378274|ref|YP_003101934.1| pyridoxamine 5'-phosphate oxidase-like FMN- binding protein [Actinosynnema
mirum DSM 43827]
gi|255922577|gb|ACU38088.1| pyridoxamine 5'-phosphate oxidase-related FMN- binding [Actinosynnema
mirum DSM 43827]
Length=143
Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/135 (37%), Positives = 67/135 (50%), Gaps = 12/135 (8%)
Query 13 AERGLAVVSTVRADGTVQASLVNVGLLPHPVSGEPSLGFTTYGKVKLGNLRARPQ--LAV 70
A L +++T++ADG Q S V + E L TT G+ K NL P+ L V
Sbjct 13 AHSSLGILATLKADGAPQLSPVQPY---YDREAEVVLVSTTAGRAKARNLGRDPRAALEV 69
Query 71 TFRNGWQWATVEGRAQLVGP-DDPRPWLVDGERLRLLLREVFTAAGGTHDDWDEYDRVMA 129
T +G WAT EG +L GP DPR VD L + + A G H DWDEY M
Sbjct 70 TSGDGLSWATAEGTVELTGPGSDPRGPEVDA------LVDYYRRAAGEHPDWDEYRAAMV 123
Query 130 QEQRAVVLITPTRIY 144
E+R ++ + +R+Y
Sbjct 124 SERRVLISLRVSRVY 138
>gi|108743476|dbj|BAE95579.1| conserved hypothetical protein [Streptomyces kanamyceticus]
Length=145
Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/141 (37%), Positives = 71/141 (51%), Gaps = 24/141 (17%)
Query 13 AERGLAVVSTVRADGTVQASLV------NVGLLPHPVSGEPSLGFTTYGKVKLGNLRARP 66
AE L V++T+++DG Q S V GLL T G+ K NLR P
Sbjct 15 AESRLGVLATIKSDGRPQLSPVLPFYDEKAGLL---------YVSMTEGRAKTANLRRDP 65
Query 67 Q--LAVTFRNGWQWATVEGRAQLVGP-DDPRPWLVDGERLRLLLREVFTAAGGTHDDWDE 123
+ L VT +G +WAT EG A L GP +DPR V+ L + + A G H DWDE
Sbjct 66 RATLEVTGPDGREWATAEGVATLTGPSEDPRGPEVEA------LVDYYRLAAGEHPDWDE 119
Query 124 YDRVMAQEQRAVVLITPTRIY 144
Y VM ++R ++++T +Y
Sbjct 120 YRSVMVADRRVLMVMTVDHVY 140
>gi|111223963|ref|YP_714757.1| hypothetical protein FRAAL4571 [Frankia alni ACN14a]
gi|111151495|emb|CAJ63213.1| Conserved hypothetical protein [Frankia alni ACN14a]
Length=143
Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/152 (39%), Positives = 77/152 (51%), Gaps = 25/152 (16%)
Query 2 TTLNEAAALAAAERGLAVVSTVRADGTVQASLVN------VGLLPHPVSGEPSLGFTTYG 55
TT + AL AA R L V++T++ADG Q S V G+L VS T G
Sbjct 3 TTPFDPRALLAASR-LGVLATIKADGRPQLSPVQPFFDRETGVLH--VS-------MTEG 52
Query 56 KVKLGNLRARPQ--LAVTFRNGWQWATVEGRAQLVGP-DDPRPWLVDGERLRLLLREVFT 112
+ K NLR P+ L VT +G WAT EG A LVGP DP G + L+ +
Sbjct 53 RAKTANLRRDPRATLEVTSPDGRAWATAEGTATLVGPGTDPH-----GPEVEALV-HYYR 106
Query 113 AAGGTHDDWDEYDRVMAQEQRAVVLITPTRIY 144
+A G H DWDEY VM ++R ++ +T +Y
Sbjct 107 SAAGEHPDWDEYRSVMVADRRVLMRMTVDHVY 138
>gi|118472024|ref|YP_890788.1| pyridoxamine 5'-phosphate oxidase [Mycobacterium smegmatis str.
MC2 155]
gi|118173311|gb|ABK74207.1| pyridoxamine 5'-phosphate oxidase family protein [Mycobacterium
smegmatis str. MC2 155]
Length=146
Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/136 (36%), Positives = 70/136 (52%), Gaps = 14/136 (10%)
Query 13 AERGLAVVSTVRADGTVQASLVNVGLLPHPVSGEPSLGFT-TYGKVKLGNLRARPQ--LA 69
AE + V++T++A+G Q S V P+ + + T G+ K NLR P+ L
Sbjct 16 AEARIGVLATIKANGLPQLSPVT----PYYDRAADIIYVSMTDGRAKTANLRRDPRAALE 71
Query 70 VTFRNGWQWATVEGRAQLVGP-DDPRPWLVDGERLRLLLREVFTAAGGTHDDWDEYDRVM 128
VT +GW WAT EG L GP DP G + L+ E + A G H DWDEY VM
Sbjct 72 VTRADGWAWATAEGTVTLTGPGTDPH-----GPEVEALV-EYYRKAAGEHPDWDEYRSVM 125
Query 129 AQEQRAVVLITPTRIY 144
++R ++ ++ R+Y
Sbjct 126 VSDRRVLMKLSVQRVY 141
>gi|226362574|ref|YP_002780352.1| hypothetical protein ROP_31600 [Rhodococcus opacus B4]
gi|226241059|dbj|BAH51407.1| hypothetical protein [Rhodococcus opacus B4]
Length=143
Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/135 (37%), Positives = 69/135 (52%), Gaps = 12/135 (8%)
Query 13 AERGLAVVSTVRADGTVQASLVNVGLLPHPVSGEPSLGFTTYGKVKLGNLRARPQ--LAV 70
AE L V++T+++DG Q S V + + T G+ K NLR P+ L V
Sbjct 13 AESRLGVLATIKSDGRPQLSPVTPF---YDREADVLYVSMTEGRAKTANLRRDPRSTLEV 69
Query 71 TFRNGWQWATVEGRAQLVGP-DDPRPWLVDGERLRLLLREVFTAAGGTHDDWDEYDRVMA 129
T +G WAT +G A L GP DPR G + L+R + AA G H DWDEY VM
Sbjct 70 TAPDGRSWATADGTALLTGPGTDPR-----GPEVEALVR-YYRAAAGEHPDWDEYRSVMV 123
Query 130 QEQRAVVLITPTRIY 144
++R ++ +T +Y
Sbjct 124 SDRRVLMTMTVHHVY 138
>gi|297560568|ref|YP_003679542.1| F420-dependent enzyme [Nocardiopsis dassonvillei subsp. dassonvillei
DSM 43111]
gi|296845016|gb|ADH67036.1| putative F420-dependent enzyme [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
Length=143
Score = 63.5 bits (153), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/147 (37%), Positives = 74/147 (51%), Gaps = 15/147 (10%)
Query 2 TTLNEAAALAAAERGLAVVSTVRADGTVQASLVNVGLLPHPVSGEPSLGFT-TYGKVKLG 60
TT + AL A R L V++T++ADG Q S V P + L + T G+ K
Sbjct 3 TTTFDPRALLAQSR-LGVLATIKADGRPQLSPVQ----PFYDAETDLLHVSMTEGRAKTA 57
Query 61 NLRARPQ--LAVTFRNGWQWATVEGRAQLVGP-DDPRPWLVDGERLRLLLREVFTAAGGT 117
NLR P+ L VT +GW WAT EG A L GP DP G + L+ + + A G
Sbjct 58 NLRRDPRATLQVTSADGWAWATAEGVATLTGPGTDPH-----GPEVESLV-DYYRLAAGE 111
Query 118 HDDWDEYDRVMAQEQRAVVLITPTRIY 144
H DW+EY VM ++R ++ + +Y
Sbjct 112 HPDWEEYRSVMVSDRRVLMTMPVDHVY 138
>gi|158315666|ref|YP_001508174.1| pyridoxamine 5'-phosphate oxidase-like protein [Frankia sp. EAN1pec]
gi|158111071|gb|ABW13268.1| pyridoxamine 5'-phosphate oxidase-related FMN-binding [Frankia
sp. EAN1pec]
Length=143
Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/136 (37%), Positives = 67/136 (50%), Gaps = 14/136 (10%)
Query 13 AERGLAVVSTVRADGTVQASLVNVGLLPHPVSGEPSLGFT-TYGKVKLGNLRARP--QLA 69
A+ L V++T+R+DG Q S V LP L + T G+ K NLR +P L
Sbjct 13 AQSRLGVLATIRSDGRPQLSPV----LPFYEEQSGVLYVSMTEGRAKTANLRRKPWAALE 68
Query 70 VTFRNGWQWATVEGRAQLVGPD-DPRPWLVDGERLRLLLREVFTAAGGTHDDWDEYDRVM 128
VT +G WAT EG L GP DP G + L+ + AA G H DW EY VM
Sbjct 69 VTSPDGRSWATAEGPVTLTGPGADPH-----GSEVEALV-NYYRAAAGEHPDWHEYRSVM 122
Query 129 AQEQRAVVLITPTRIY 144
E+R ++ +T +Y
Sbjct 123 VSERRVLMAMTVEHVY 138
>gi|262202612|ref|YP_003273820.1| PPOX class F420-dependent enzyme [Gordonia bronchialis DSM 43247]
gi|262085959|gb|ACY21927.1| PPOX class putative F420-dependent enzyme [Gordonia bronchialis
DSM 43247]
Length=143
Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/131 (33%), Positives = 67/131 (52%), Gaps = 12/131 (9%)
Query 17 LAVVSTVRADGTVQASLVNVGLLPHPVSGEPSLGFTTYGKVKLGNLRARPQ--LAVTFRN 74
+ V++T+++DG Q S V + S + L G+ K N+R P+ L VT +
Sbjct 17 IGVLATIKSDGMPQLSPVTPF---YDRSTDTILVSVAQGRAKTANMRRDPRAALEVTSSD 73
Query 75 GWQWATVEGRAQLVGP-DDPRPWLVDGERLRLLLREVFTAAGGTHDDWDEYDRVMAQEQR 133
G+ WAT EG LVGP DDP G + L+ + + A G H DWDEY M ++R
Sbjct 74 GYTWATAEGAVTLVGPGDDPH-----GPEVEALV-DYYRRAAGEHPDWDEYRAAMVDDRR 127
Query 134 AVVLITPTRIY 144
++ + ++Y
Sbjct 128 VLMTMQVHKVY 138
>gi|343924891|ref|ZP_08764427.1| hypothetical protein GOALK_029_00080 [Gordonia alkanivorans NBRC
16433]
gi|343765154|dbj|GAA11353.1| hypothetical protein GOALK_029_00080 [Gordonia alkanivorans NBRC
16433]
Length=143
Score = 61.6 bits (148), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/147 (32%), Positives = 71/147 (49%), Gaps = 12/147 (8%)
Query 1 MTTLNEAAALAAAERGLAVVSTVRADGTVQASLVNVGLLPHPVSGEPSLGFTTYGKVKLG 60
MTT AE L V++T+++ G Q S V + + T G+ K
Sbjct 1 MTTSKYDPRDLLAESSLGVLATIKSSGLPQLSPVTAY---YDRDADTIYVSMTEGRAKTA 57
Query 61 NLRARPQ--LAVTFRNGWQWATVEGRAQLVGP-DDPRPWLVDGERLRLLLREVFTAAGGT 117
NLR P+ L VT + + WAT EG L+GP DP G + L+ + + A G
Sbjct 58 NLRRDPRAALEVTGPDRYTWATAEGDVVLIGPGTDPH-----GPEVEALV-DYYRKAAGE 111
Query 118 HDDWDEYDRVMAQEQRAVVLITPTRIY 144
H DWDEY VM ++R +++++ R+Y
Sbjct 112 HPDWDEYRSVMVSDRRVLMVMSVKRVY 138
>gi|324998198|ref|ZP_08119310.1| putative pyridoxamine 5'-phosphate oxidase [Pseudonocardia sp.
P1]
Length=140
Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/129 (33%), Positives = 69/129 (54%), Gaps = 12/129 (9%)
Query 19 VVSTVRADGTVQASLVNVGLLPHPVSGEPSLGFT-TYGKVKLGNLRARPQ--LAVTFRNG 75
V++T++ G Q S V P+ ++G + T G+ K NLR P+ L+V +G
Sbjct 16 VLATIKRSGMPQLSPVT----PYYDRAAGTIGVSMTEGRAKTANLRRDPRAALSVESADG 71
Query 76 WQWATVEGRAQLVGPDDPRPWLVDGERLRLLLREVFTAAGGTHDDWDEYDRVMAQEQRAV 135
WAT EG +L GPDD DG ++ L+ + + AA G H DWD++ M +++R +
Sbjct 72 RAWATAEGPVELAGPDDS----PDGPAVQALV-DWYRAAAGEHPDWDDFRAAMVRDRRVL 126
Query 136 VLITPTRIY 144
+ + R+Y
Sbjct 127 MTMHVQRVY 135
>gi|134096729|ref|YP_001102390.1| pyridoxamine 5'-phosphate oxidase-related,FMN-binding [Saccharopolyspora
erythraea NRRL 2338]
gi|133909352|emb|CAL99464.1| pyridoxamine 5'-phosphate oxidase-related,FMN-binding [Saccharopolyspora
erythraea NRRL 2338]
Length=136
Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/145 (36%), Positives = 72/145 (50%), Gaps = 18/145 (12%)
Query 4 LNEAAALAAAERGLAVVSTVRADGTVQASLVNVGLLPHPVSGEPSLGFTTYGKVKLGNLR 63
L EA A+ ++ AV+ST+RADGT Q S V L +G ++ T+ K+ NLR
Sbjct 3 LEEAVAVVR-QQHRAVLSTLRADGTPQMSPV---LATTDDAGHVTVS-TSEKSAKVRNLR 57
Query 64 ARPQ--LAVTFRNGW-QWATVEGRAQLVGPDDPRPWLVDGERLRLLLREVFTAAGGTHDD 120
P+ L V + +W VEG ++V D P LL E F + G HDD
Sbjct 58 RDPRAWLCVLPDEFFGRWVQVEGDVEIVELPDAMP----------LLEEYFRSISGEHDD 107
Query 121 WDEYDRVMAQEQRAVVLITPTRIYS 145
W++Y M E R ++ +TPTR S
Sbjct 108 WEQYRAAMRDEGRVLLRVTPTRAVS 132
>gi|169629681|ref|YP_001703330.1| putative pyridoxamine 5'-phosphate oxidase [Mycobacterium abscessus
ATCC 19977]
gi|169241648|emb|CAM62676.1| Putative pyridoxamine 5'-phosphate oxidase [Mycobacterium abscessus]
Length=143
Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/135 (33%), Positives = 67/135 (50%), Gaps = 14/135 (10%)
Query 14 ERGLAVVSTVRADGTVQASLVNVGLLPHPVSGEPSLGFT-TYGKVKLGNLRARPQ--LAV 70
E L +++T+++ G Q S V P+ + + T G+ K NLR P+ L
Sbjct 14 ESRLGILATIKSSGLPQLSPVT----PYYDRDNGIIYVSMTDGRAKTANLRRDPRAALEC 69
Query 71 TFRNGWQWATVEGRAQLVGPD-DPRPWLVDGERLRLLLREVFTAAGGTHDDWDEYDRVMA 129
T +G WAT EG L GP DP DG ++ L+ + + A G H DWDEY VM
Sbjct 70 TSSDGRAWATAEGHVTLTGPGADP-----DGPEVQALV-DYYRGAAGEHPDWDEYRSVMV 123
Query 130 QEQRAVVLITPTRIY 144
++R ++ + R+Y
Sbjct 124 SDRRVLMALRVERVY 138
>gi|258654947|ref|YP_003204103.1| pyridoxamine 5'-phosphate oxidase-like protein [Nakamurella multipartita
DSM 44233]
gi|258558172|gb|ACV81114.1| pyridoxamine 5'-phosphate oxidase-related FMN- binding [Nakamurella
multipartita DSM 44233]
Length=132
Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/130 (34%), Positives = 68/130 (53%), Gaps = 22/130 (16%)
Query 18 AVVSTVRADGTVQASLVNVGLLPHPVSGEPSLGFTTYGKVKLGNLRARPQLAV-----TF 72
AV++T R DG+ Q S VN G+ V G + + + K+ N+R P ++V F
Sbjct 16 AVLATRRRDGSPQLSPVNAGV----VDGRVCIS-SQAPRAKVRNIRRDPAVSVLVLPEAF 70
Query 73 RNGWQWATVEGRAQLVGPDDPRPWLVDGERLRLLLREVFTAAGGTHDDWDEYDRVMAQEQ 132
GW ++G A++V +P +D LL +V+ A G H DWD+Y M +++
Sbjct 71 YGGW--VQLDGTAEIVD----QPAALD------LLEQVYRAIRGEHPDWDDYRAAMIRDE 118
Query 133 RAVVLITPTR 142
R V+ ITPTR
Sbjct 119 RVVIAITPTR 128
>gi|291008461|ref|ZP_06566434.1| pyridoxamine 5'-phosphate oxidase-related,FMN-binding protein
[Saccharopolyspora erythraea NRRL 2338]
Length=128
Score = 57.0 bits (136), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/131 (36%), Positives = 65/131 (50%), Gaps = 17/131 (12%)
Query 18 AVVSTVRADGTVQASLVNVGLLPHPVSGEPSLGFTTYGKVKLGNLRARPQ--LAVTFRNG 75
AV+ST+RADGT Q S V L +G ++ T+ K+ NLR P+ L V
Sbjct 8 AVLSTLRADGTPQMSPV---LATTDDAGHVTVS-TSEKSAKVRNLRRDPRAWLCVLPDEF 63
Query 76 W-QWATVEGRAQLVGPDDPRPWLVDGERLRLLLREVFTAAGGTHDDWDEYDRVMAQEQRA 134
+ +W VEG ++V D P LL E F + G HDDW++Y M E R
Sbjct 64 FGRWVQVEGDVEIVELPDAMP----------LLEEYFRSISGEHDDWEQYRAAMRDEGRV 113
Query 135 VVLITPTRIYS 145
++ +TPTR S
Sbjct 114 LLRVTPTRAVS 124
>gi|269126226|ref|YP_003299596.1| pyridoxamine 5'-phosphate oxidase-like FMN-binding protein [Thermomonospora
curvata DSM 43183]
gi|268311184|gb|ACY97558.1| pyridoxamine 5'-phosphate oxidase-related FMN- binding protein
[Thermomonospora curvata DSM 43183]
Length=143
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/147 (35%), Positives = 73/147 (50%), Gaps = 16/147 (10%)
Query 4 LNEAAALAA--AERGLAVVSTVRADGTVQASLVNVGLLPHPVSGEPSLGFT-TYGKVKLG 60
+ + AAL A +ER L V++T+R +G Q S V + H G + + T + K
Sbjct 1 MTDTAALRALLSERELGVLATIRRNGRPQLSTV----VYHYDPGRELIRISVTADRAKTR 56
Query 61 NLRARPQ--LAVTFRNGWQWATVEGRAQLVG-PDDPRPWLVDGERLRLLLREVFTAAGGT 117
NL P+ L V+ +GW WA EG A+L DP+ V L +++ A G
Sbjct 57 NLARDPRASLHVSAADGWSWAVAEGTAELSPVAADPQDATVAE------LIDLYRAIRGE 110
Query 118 HDDWDEYDRVMAQEQRAVVLITPTRIY 144
H DWD+Y R M E+R VV + R+Y
Sbjct 111 HPDWDDYRRAMVAERRLVVRLHVERLY 137
>gi|291452763|ref|ZP_06592153.1| ATP binding protein [Streptomyces albus J1074]
gi|291355712|gb|EFE82614.1| ATP binding protein [Streptomyces albus J1074]
Length=153
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/133 (32%), Positives = 65/133 (49%), Gaps = 21/133 (15%)
Query 15 RGLAVVSTVRADGTVQASLVNVGLLPHPVSGEPSLGFTTYG-KVKLGNLRARPQLAVT-F 72
R A++ T RADG+ QAS + G V GE + +TY + K N + P+++V
Sbjct 23 RHRALLLTARADGSPQASPLTCG-----VDGEGRIVVSTYPERAKTRNAQRNPKVSVVVL 77
Query 73 RNGWQ--WATVEGRAQLV-GPDDPRPWLVDGERLRLLLREVFTAAGGTHDDWDEYDRVMA 129
+ W W ++G A+++ PD P L E F G H DWDEY M
Sbjct 78 SDEWNGPWVQIDGTAKVIDAPDSVEP-----------LVEYFRVISGEHPDWDEYRAAML 126
Query 130 QEQRAVVLITPTR 142
++ ++++ ITP R
Sbjct 127 KQGKSLIRITPER 139
>gi|326381679|ref|ZP_08203373.1| putative F420-dependent enzyme [Gordonia neofelifaecis NRRL B-59395]
gi|326199926|gb|EGD57106.1| putative F420-dependent enzyme [Gordonia neofelifaecis NRRL B-59395]
Length=161
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/134 (33%), Positives = 60/134 (45%), Gaps = 23/134 (17%)
Query 15 RGLAVVSTVRADGTVQASLVNVGLLPHPVSGEPSLGFTTY-GKVKLGNLRARPQLAV--- 70
R V+ST R DG+ Q S V G V + + TY G+ K N R P + V
Sbjct 23 RHHVVLSTTRGDGSSQMSPVTAG-----VDEQGRIVIATYPGRAKTANARRHPTVGVLVL 77
Query 71 --TFRNGWQWATVEGRAQLVGPDDPRPWLVDGERLRLLLREVFTAAGGTHDDWDEYDRVM 128
F + W V+G A+++ D LVD F + G H DWDEY M
Sbjct 78 SENFNDAW--VQVDGTAEVLDMPDAEDALVD----------YFRSIAGEHSDWDEYRAAM 125
Query 129 AQEQRAVVLITPTR 142
+ ++++ ITPTR
Sbjct 126 RVQNKSLIRITPTR 139
>gi|300790926|ref|YP_003771217.1| pyridoxamine 5'-phosphate oxidase [Amycolatopsis mediterranei
U32]
gi|299800440|gb|ADJ50815.1| pyridoxamine 5'-phosphate oxidase [Amycolatopsis mediterranei
U32]
gi|340532622|gb|AEK47827.1| pyridoxamine 5'-phosphate oxidase [Amycolatopsis mediterranei
S699]
Length=141
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/135 (32%), Positives = 59/135 (44%), Gaps = 24/135 (17%)
Query 13 AERGLAVVSTVRADGTVQASLVNVGLLPHPVSGEPSLGFTTYGKVKLGNLRARPQLAVTF 72
A R V++T+R DG Q S + P P + S+ T + K N+R P+ VTF
Sbjct 12 AARRHGVLATIRRDGRPQLSTITYRYDPEPATLIASI---TETRAKTKNMRRDPR--VTF 66
Query 73 R----NGWQWATVEGRAQLVGP-----DDPRPWLVDGERLRLLLREVFTAAGGTHDDWDE 123
+GW + EGRA L P DD LVD + A G H DW E
Sbjct 67 HVGSEDGWSYVVAEGRASLTAPAAAPDDDTVEALVD----------YYRCAAGEHPDWAE 116
Query 124 YDRVMAQEQRAVVLI 138
Y M +QR ++ +
Sbjct 117 YRAAMVTDQRVLLTV 131
>gi|120406661|ref|YP_956490.1| pyridoxamine 5'-phosphate oxidase-like protein [Mycobacterium
vanbaalenii PYR-1]
gi|119959479|gb|ABM16484.1| pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein
[Mycobacterium vanbaalenii PYR-1]
Length=151
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/132 (34%), Positives = 68/132 (52%), Gaps = 19/132 (14%)
Query 15 RGLAVVSTVRADGTVQASLVNVGLLPHPVSGEPSLGFTTY-GKVKLGNLRARPQLAVTFR 73
R V++T RADG++Q+S V+ G V E + TY + K NLR RP+ +V
Sbjct 23 RHRMVLTTYRADGSLQSSPVSGG-----VDAEGRIVIATYPQRAKTANLRRRPRASVVVL 77
Query 74 NGW---QWATVEGRAQLVGPDDPRPWLVDGERLRLLLREVFTAAGGTHDDWDEYDRVMAQ 130
+ + V+G A++V D P E L L+ E F + G H DWDEY + M
Sbjct 78 SDEFDGPYVQVDGDAEVV--DLP-------EALEPLV-EYFRSIAGEHPDWDEYRQAMVD 127
Query 131 EQRAVVLITPTR 142
+++ ++ +TP R
Sbjct 128 QRKCLIRVTPRR 139
>gi|326383442|ref|ZP_08205129.1| pyridoxamine 5'-phosphate oxidase family protein [Gordonia neofelifaecis
NRRL B-59395]
gi|326197848|gb|EGD55035.1| pyridoxamine 5'-phosphate oxidase family protein [Gordonia neofelifaecis
NRRL B-59395]
Length=141
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/145 (28%), Positives = 64/145 (45%), Gaps = 32/145 (22%)
Query 13 AERGLAVVSTVRADGTVQ-----------ASLVNVGLLPHPVSGEPSLGFTTYGKVKLGN 61
AE + V++T+R+ G Q A L++V + T G+ K N
Sbjct 11 AETPIGVLATIRSSGLPQLSPVTAVYDRDADLIHVSM--------------TEGRAKTAN 56
Query 62 LRARPQLAVTFR--NGWQWATVEGRAQLVGPDDPRPWLVDGERLRLLLREVFTAAGGTHD 119
LR P+ A+ F +G+ WAT EG L GP + L + + G H
Sbjct 57 LRRDPRAAIEFTSPDGYSWATAEGGVTLTGPS-----DDPDDPAVDALVDYYRLGAGEHP 111
Query 120 DWDEYDRVMAQEQRAVVLITPTRIY 144
DW EY VM ++R ++ ++ T++Y
Sbjct 112 DWREYREVMVSDRRVLMTMSITKVY 136
Lambda K H
0.318 0.134 0.406
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 131150363096
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40