BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv1883c
Length=153
Score E
Sequences producing significant alignments: (Bits) Value
gi|15609020|ref|NP_216399.1| hypothetical protein Rv1883c [Mycob... 317 5e-85
gi|15841353|ref|NP_336390.1| hypothetical protein MT1931.1 [Myco... 310 3e-83
gi|308402701|ref|ZP_07493613.2| hypothetical protein TMLG_01156 ... 310 5e-83
gi|308369548|ref|ZP_07418223.2| hypothetical protein TMBG_00416 ... 304 3e-81
gi|326903486|gb|EGE50419.1| hypothetical protein TBPG_01361 [Myc... 297 4e-79
gi|240170529|ref|ZP_04749188.1| hypothetical protein MkanA1_1454... 253 1e-65
gi|118618375|ref|YP_906707.1| hypothetical protein MUL_2976 [Myc... 248 1e-64
gi|41407704|ref|NP_960540.1| hypothetical protein MAP1606c [Myco... 243 5e-63
gi|183982777|ref|YP_001851068.1| hypothetical protein MMAR_2771 ... 241 2e-62
gi|336457544|gb|EGO36550.1| Polyketide cyclase / dehydrase and l... 232 1e-59
gi|118463871|ref|YP_882006.1| cyclase/dehydrase [Mycobacterium a... 232 1e-59
gi|342859532|ref|ZP_08716185.1| cyclase/dehydrase [Mycobacterium... 232 1e-59
gi|15828098|ref|NP_302361.1| hypothetical protein ML2031 [Mycoba... 232 2e-59
gi|296164902|ref|ZP_06847458.1| cyclase/dehydrase [Mycobacterium... 230 4e-59
gi|254775298|ref|ZP_05216814.1| cyclase/dehydrase superfamily pr... 230 5e-59
gi|254819298|ref|ZP_05224299.1| cyclase/dehydrase superfamily pr... 228 2e-58
gi|333990612|ref|YP_004523226.1| hypothetical protein JDM601_197... 216 6e-55
gi|325002365|ref|ZP_08123477.1| hypothetical protein PseP1_26552... 194 4e-48
gi|119868815|ref|YP_938767.1| cyclase/dehydrase [Mycobacterium s... 192 1e-47
gi|126435349|ref|YP_001071040.1| cyclase/dehydrase [Mycobacteriu... 187 3e-46
gi|108799705|ref|YP_639902.1| cyclase/dehydrase [Mycobacterium s... 183 6e-45
gi|169631033|ref|YP_001704682.1| hypothetical protein MAB_3954c ... 175 2e-42
gi|119718772|ref|YP_925737.1| activator of Hsp90 ATPase 1 family... 150 5e-35
gi|297161063|gb|ADI10775.1| hypothetical protein SBI_07655 [Stre... 98.2 3e-19
gi|288919447|ref|ZP_06413779.1| cyclase/dehydrase [Frankia sp. E... 90.9 6e-17
gi|240169531|ref|ZP_04748190.1| cyclase/dehydrase [Mycobacterium... 80.9 5e-14
gi|158316323|ref|YP_001508831.1| cyclase/dehydrase [Frankia sp. ... 80.5 7e-14
gi|324999788|ref|ZP_08120900.1| hypothetical protein PseP1_13516... 75.5 3e-12
gi|240168128|ref|ZP_04746787.1| hypothetical protein MkanA1_0235... 74.3 6e-12
gi|111020928|ref|YP_703900.1| hypothetical protein RHA1_ro03945 ... 73.6 8e-12
gi|340527528|gb|AEK42733.1| hypothetical protein RAM_21265 [Amyc... 73.2 1e-11
gi|302544826|ref|ZP_07297168.1| cyclase/dehydrase [Streptomyces ... 72.4 2e-11
gi|134096650|ref|YP_001102311.1| hypothetical protein SACE_0032 ... 71.6 4e-11
gi|29833944|ref|NP_828578.1| cyclase/dehydrase [Streptomyces ave... 71.2 4e-11
gi|226363224|ref|YP_002781006.1| hypothetical protein ROP_38140 ... 70.9 6e-11
gi|300786063|ref|YP_003766354.1| hypothetical protein AMED_4175 ... 70.9 6e-11
gi|296167317|ref|ZP_06849719.1| cyclase/dehydrase [Mycobacterium... 70.5 7e-11
gi|118619838|ref|YP_908170.1| hypothetical protein MUL_4783 [Myc... 68.9 2e-10
gi|325002254|ref|ZP_08123366.1| hypothetical protein PseP1_25991... 68.9 2e-10
gi|1654412|gb|AAB17876.1| Nsh-OrfB [Streptomyces actuosus] 67.4 7e-10
gi|226360630|ref|YP_002778408.1| hypothetical protein ROP_12160 ... 66.2 1e-09
gi|297197063|ref|ZP_06914460.1| cyclase/dehydrase [Streptomyces ... 66.2 1e-09
gi|300787963|ref|YP_003768254.1| hypothetical protein AMED_6114 ... 65.9 2e-09
gi|254822379|ref|ZP_05227380.1| hypothetical protein MintA_20771... 65.5 3e-09
gi|331699950|ref|YP_004336189.1| polyketide cyclase/dehydrase [P... 65.1 4e-09
gi|145222660|ref|YP_001133338.1| hypothetical protein Mflv_2072 ... 64.3 6e-09
gi|126434681|ref|YP_001070372.1| hemerythrin HHE cation binding ... 63.9 7e-09
gi|111023681|ref|YP_706653.1| hypothetical protein RHA1_ro06723 ... 62.8 2e-08
gi|118464976|ref|YP_882849.1| hypothetical protein MAV_3672 [Myc... 62.8 2e-08
gi|134099544|ref|YP_001105205.1| cyclase/dehydrase [Saccharopoly... 62.4 2e-08
>gi|15609020|ref|NP_216399.1| hypothetical protein Rv1883c [Mycobacterium tuberculosis H37Rv]
gi|148661689|ref|YP_001283212.1| hypothetical protein MRA_1894 [Mycobacterium tuberculosis H37Ra]
gi|167970366|ref|ZP_02552643.1| hypothetical protein MtubH3_20988 [Mycobacterium tuberculosis
H37Ra]
8 more sequence titles
Length=153
Score = 317 bits (811), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 153/153 (100%), Positives = 153/153 (100%), Gaps = 0/153 (0%)
Query 1 MCLDQVMEGSATVHMAAPPDKIWTLIADVRNTGRFSPETFEAEWLDGATGPALGARFRGH 60
MCLDQVMEGSATVHMAAPPDKIWTLIADVRNTGRFSPETFEAEWLDGATGPALGARFRGH
Sbjct 1 MCLDQVMEGSATVHMAAPPDKIWTLIADVRNTGRFSPETFEAEWLDGATGPALGARFRGH 60
Query 61 VRRNGIGPVYWTVCEPGREFGFAVLLGDRPVNNWHYRLTPTADGTEVTESFRLPPSVLTT 120
VRRNGIGPVYWTVCEPGREFGFAVLLGDRPVNNWHYRLTPTADGTEVTESFRLPPSVLTT
Sbjct 61 VRRNGIGPVYWTVCEPGREFGFAVLLGDRPVNNWHYRLTPTADGTEVTESFRLPPSVLTT 120
Query 121 VYYRVFGGWLRQRRNIRDMTKTLQRIKDLVEAG 153
VYYRVFGGWLRQRRNIRDMTKTLQRIKDLVEAG
Sbjct 121 VYYRVFGGWLRQRRNIRDMTKTLQRIKDLVEAG 153
>gi|15841353|ref|NP_336390.1| hypothetical protein MT1931.1 [Mycobacterium tuberculosis CDC1551]
gi|31793074|ref|NP_855567.1| hypothetical protein Mb1915c [Mycobacterium bovis AF2122/97]
gi|121637787|ref|YP_978010.1| hypothetical protein BCG_1920c [Mycobacterium bovis BCG str.
Pasteur 1173P2]
50 more sequence titles
Length=158
Score = 310 bits (795), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 153/158 (97%), Positives = 153/158 (97%), Gaps = 5/158 (3%)
Query 1 MCLDQVMEGSATVHMAAPPDKIWTLIADVRNTGRFSPETFEAEWLDGATGPALGARFRGH 60
MCLDQVMEGSATVHMAAPPDKIWTLIADVRNTGRFSPETFEAEWLDGATGPALGARFRGH
Sbjct 1 MCLDQVMEGSATVHMAAPPDKIWTLIADVRNTGRFSPETFEAEWLDGATGPALGARFRGH 60
Query 61 VRRNGIGPVYWTVCE-----PGREFGFAVLLGDRPVNNWHYRLTPTADGTEVTESFRLPP 115
VRRNGIGPVYWTVCE PGREFGFAVLLGDRPVNNWHYRLTPTADGTEVTESFRLPP
Sbjct 61 VRRNGIGPVYWTVCEVTACEPGREFGFAVLLGDRPVNNWHYRLTPTADGTEVTESFRLPP 120
Query 116 SVLTTVYYRVFGGWLRQRRNIRDMTKTLQRIKDLVEAG 153
SVLTTVYYRVFGGWLRQRRNIRDMTKTLQRIKDLVEAG
Sbjct 121 SVLTTVYYRVFGGWLRQRRNIRDMTKTLQRIKDLVEAG 158
>gi|308402701|ref|ZP_07493613.2| hypothetical protein TMLG_01156 [Mycobacterium tuberculosis SUMu012]
gi|308365931|gb|EFP54782.1| hypothetical protein TMLG_01156 [Mycobacterium tuberculosis SUMu012]
Length=151
Score = 310 bits (794), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 150/151 (99%), Positives = 151/151 (100%), Gaps = 0/151 (0%)
Query 3 LDQVMEGSATVHMAAPPDKIWTLIADVRNTGRFSPETFEAEWLDGATGPALGARFRGHVR 62
+DQVMEGSATVHMAAPPDKIWTLIADVRNTGRFSPETFEAEWLDGATGPALGARFRGHVR
Sbjct 1 MDQVMEGSATVHMAAPPDKIWTLIADVRNTGRFSPETFEAEWLDGATGPALGARFRGHVR 60
Query 63 RNGIGPVYWTVCEPGREFGFAVLLGDRPVNNWHYRLTPTADGTEVTESFRLPPSVLTTVY 122
RNGIGPVYWTVCEPGREFGFAVLLGDRPVNNWHYRLTPTADGTEVTESFRLPPSVLTTVY
Sbjct 61 RNGIGPVYWTVCEPGREFGFAVLLGDRPVNNWHYRLTPTADGTEVTESFRLPPSVLTTVY 120
Query 123 YRVFGGWLRQRRNIRDMTKTLQRIKDLVEAG 153
YRVFGGWLRQRRNIRDMTKTLQRIKDLVEAG
Sbjct 121 YRVFGGWLRQRRNIRDMTKTLQRIKDLVEAG 151
>gi|308369548|ref|ZP_07418223.2| hypothetical protein TMBG_00416 [Mycobacterium tuberculosis SUMu002]
gi|308370847|ref|ZP_07422949.2| hypothetical protein TMCG_02923 [Mycobacterium tuberculosis SUMu003]
gi|308372078|ref|ZP_07427314.2| hypothetical protein TMDG_03915 [Mycobacterium tuberculosis SUMu004]
13 more sequence titles
Length=156
Score = 304 bits (779), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 150/156 (97%), Positives = 151/156 (97%), Gaps = 5/156 (3%)
Query 3 LDQVMEGSATVHMAAPPDKIWTLIADVRNTGRFSPETFEAEWLDGATGPALGARFRGHVR 62
+DQVMEGSATVHMAAPPDKIWTLIADVRNTGRFSPETFEAEWLDGATGPALGARFRGHVR
Sbjct 1 MDQVMEGSATVHMAAPPDKIWTLIADVRNTGRFSPETFEAEWLDGATGPALGARFRGHVR 60
Query 63 RNGIGPVYWTVCE-----PGREFGFAVLLGDRPVNNWHYRLTPTADGTEVTESFRLPPSV 117
RNGIGPVYWTVCE PGREFGFAVLLGDRPVNNWHYRLTPTADGTEVTESFRLPPSV
Sbjct 61 RNGIGPVYWTVCEVTACEPGREFGFAVLLGDRPVNNWHYRLTPTADGTEVTESFRLPPSV 120
Query 118 LTTVYYRVFGGWLRQRRNIRDMTKTLQRIKDLVEAG 153
LTTVYYRVFGGWLRQRRNIRDMTKTLQRIKDLVEAG
Sbjct 121 LTTVYYRVFGGWLRQRRNIRDMTKTLQRIKDLVEAG 156
>gi|326903486|gb|EGE50419.1| hypothetical protein TBPG_01361 [Mycobacterium tuberculosis W-148]
Length=152
Score = 297 bits (760), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 147/152 (97%), Positives = 147/152 (97%), Gaps = 5/152 (3%)
Query 7 MEGSATVHMAAPPDKIWTLIADVRNTGRFSPETFEAEWLDGATGPALGARFRGHVRRNGI 66
MEGSATVHMAAPPDKIWTLIADVRNTGRFSPETFEAEWLDGATGPALGARFRGHVRRNGI
Sbjct 1 MEGSATVHMAAPPDKIWTLIADVRNTGRFSPETFEAEWLDGATGPALGARFRGHVRRNGI 60
Query 67 GPVYWTVCE-----PGREFGFAVLLGDRPVNNWHYRLTPTADGTEVTESFRLPPSVLTTV 121
GPVYWTVCE PGREFGFAVLLGDRPVNNWHYRLTPTADGTEVTESFRLPPSVLTTV
Sbjct 61 GPVYWTVCEVTACEPGREFGFAVLLGDRPVNNWHYRLTPTADGTEVTESFRLPPSVLTTV 120
Query 122 YYRVFGGWLRQRRNIRDMTKTLQRIKDLVEAG 153
YYRVFGGWLRQRRNIRDMTKTLQRIKDLVEAG
Sbjct 121 YYRVFGGWLRQRRNIRDMTKTLQRIKDLVEAG 152
>gi|240170529|ref|ZP_04749188.1| hypothetical protein MkanA1_14545 [Mycobacterium kansasii ATCC
12478]
Length=152
Score = 253 bits (645), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 125/151 (83%), Positives = 130/151 (87%), Gaps = 5/151 (3%)
Query 7 MEGSATVHMAAPPDKIWTLIADVRNTGRFSPETFEAEWLDGATGPALGARFRGHVRRNGI 66
MEGSATVHMAAP KIW LIAD+RNTGRFSPETFEAEWLDGATGPALGARFRGHVRRN I
Sbjct 1 MEGSATVHMAAPAQKIWDLIADIRNTGRFSPETFEAEWLDGATGPALGARFRGHVRRNEI 60
Query 67 GPVYWTV-----CEPGREFGFAVLLGDRPVNNWHYRLTPTADGTEVTESFRLPPSVLTTV 121
GPVYWTV CE REFGFAV+ G R VNNWHYRL P DGT+VTESFRL PSV TTV
Sbjct 61 GPVYWTVCKVTACERPREFGFAVMAGGRSVNNWHYRLEPAGDGTDVTESFRLTPSVFTTV 120
Query 122 YYRVFGGWLRQRRNIRDMTKTLQRIKDLVEA 152
YY FGGWLR+RRNIRDMTKTLQRIKD+VEA
Sbjct 121 YYWAFGGWLRKRRNIRDMTKTLQRIKDVVEA 151
>gi|118618375|ref|YP_906707.1| hypothetical protein MUL_2976 [Mycobacterium ulcerans Agy99]
gi|118570485|gb|ABL05236.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99]
Length=152
Score = 248 bits (634), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 121/152 (80%), Positives = 132/152 (87%), Gaps = 5/152 (3%)
Query 7 MEGSATVHMAAPPDKIWTLIADVRNTGRFSPETFEAEWLDGATGPALGARFRGHVRRNGI 66
M+GSATVHMAAP DKIW LIA++RNTGRFSPETFEAEWLDGATGPALGARF GHVRRN I
Sbjct 1 MKGSATVHMAAPADKIWDLIAEIRNTGRFSPETFEAEWLDGATGPALGARFWGHVRRNEI 60
Query 67 GPVYWTV-----CEPGREFGFAVLLGDRPVNNWHYRLTPTADGTEVTESFRLPPSVLTTV 121
GPVYWTV CEP REF FAV++GDRPVNNWHYRL P+ GT+VTESFRL S L+TV
Sbjct 61 GPVYWTVCEVTACEPSREFEFAVMMGDRPVNNWHYRLAPSGGGTDVTESFRLAESPLSTV 120
Query 122 YYRVFGGWLRQRRNIRDMTKTLQRIKDLVEAG 153
YY +FGGWLR+RRNIRDMTKTL RIKD+VEA
Sbjct 121 YYWMFGGWLRKRRNIRDMTKTLNRIKDVVEAA 152
>gi|41407704|ref|NP_960540.1| hypothetical protein MAP1606c [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41396057|gb|AAS03923.1| hypothetical protein MAP_1606c [Mycobacterium avium subsp. paratuberculosis
K-10]
Length=159
Score = 243 bits (621), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 123/157 (79%), Positives = 131/157 (84%), Gaps = 6/157 (3%)
Query 1 MCLDQVMEGSATVHMAAPPDKIWTLIADVRNTGRFSPETFEAEWLDGATGPALGARFRGH 60
MCLDQ MEGSATVHMAAP KIW LIADVRN GRFSPE FEAEWL GATGPALGA+FRGH
Sbjct 1 MCLDQPMEGSATVHMAAPAAKIWDLIADVRNMGRFSPEVFEAEWLGGATGPALGAKFRGH 60
Query 61 VRRNGIGPVYW-----TVCEPGREFGFAVLLGDRPVNNWHYRLTPTADGTEVTESFRLPP 115
VRRN IGPVYW T CEPGREFGF VLLGDR VNNWHYRL P+ GT+VTESFRL P
Sbjct 61 VRRNEIGPVYWTTCKVTACEPGREFGFTVLLGDREVNNWHYRLAPSGGGTDVTESFRLNP 120
Query 116 SVLTTVYYRVFGGWLRQRRNIRDMTKTLQRIKDLVEA 152
+ VY+ VFGG+LR+RRNIRDMTKTL RIKD+VEA
Sbjct 121 APWVPVYW-VFGGFLRKRRNIRDMTKTLNRIKDVVEA 156
>gi|183982777|ref|YP_001851068.1| hypothetical protein MMAR_2771 [Mycobacterium marinum M]
gi|183176103|gb|ACC41213.1| conserved hypothetical protein [Mycobacterium marinum M]
Length=144
Score = 241 bits (615), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 117/144 (82%), Positives = 126/144 (88%), Gaps = 5/144 (3%)
Query 15 MAAPPDKIWTLIADVRNTGRFSPETFEAEWLDGATGPALGARFRGHVRRNGIGPVYWTVC 74
MAAP DKIW LIAD+RNTGRFSPETFEAEWLDGATGPALGARFRGHVRRN IGPVYWTVC
Sbjct 1 MAAPADKIWDLIADIRNTGRFSPETFEAEWLDGATGPALGARFRGHVRRNEIGPVYWTVC 60
Query 75 E-----PGREFGFAVLLGDRPVNNWHYRLTPTADGTEVTESFRLPPSVLTTVYYRVFGGW 129
E P REFGFAV++GDRPVNNWHYRL P+ GT+VTESFRL S L+TVYY +FGGW
Sbjct 61 EVTACEPSREFGFAVMMGDRPVNNWHYRLAPSGGGTDVTESFRLAESPLSTVYYWMFGGW 120
Query 130 LRQRRNIRDMTKTLQRIKDLVEAG 153
LR+RRNIRDMTKTL RIKD+VEA
Sbjct 121 LRKRRNIRDMTKTLNRIKDVVEAA 144
>gi|336457544|gb|EGO36550.1| Polyketide cyclase / dehydrase and lipid transport [Mycobacterium
avium subsp. paratuberculosis S397]
Length=153
Score = 232 bits (592), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 118/151 (79%), Positives = 126/151 (84%), Gaps = 6/151 (3%)
Query 7 MEGSATVHMAAPPDKIWTLIADVRNTGRFSPETFEAEWLDGATGPALGARFRGHVRRNGI 66
MEGSATVHMAAP KIW LIADVRN GRFSPE FEAEWL GATGPALGA+FRGHVRRN I
Sbjct 1 MEGSATVHMAAPAAKIWDLIADVRNMGRFSPEVFEAEWLGGATGPALGAKFRGHVRRNEI 60
Query 67 GPVYW-----TVCEPGREFGFAVLLGDRPVNNWHYRLTPTADGTEVTESFRLPPSVLTTV 121
GPVYW T CEPGREFGF VLLGDR VNNWHYRL P+ GT+VTESFRL P+ V
Sbjct 61 GPVYWTTCKVTACEPGREFGFTVLLGDREVNNWHYRLAPSGGGTDVTESFRLNPAPWVPV 120
Query 122 YYRVFGGWLRQRRNIRDMTKTLQRIKDLVEA 152
Y+ VFGG+LR+RRNIRDMTKTL RIKD+VEA
Sbjct 121 YW-VFGGFLRKRRNIRDMTKTLNRIKDVVEA 150
>gi|118463871|ref|YP_882006.1| cyclase/dehydrase [Mycobacterium avium 104]
gi|118165158|gb|ABK66055.1| cyclase/dehydrase superfamily protein [Mycobacterium avium 104]
Length=153
Score = 232 bits (591), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 118/151 (79%), Positives = 126/151 (84%), Gaps = 6/151 (3%)
Query 7 MEGSATVHMAAPPDKIWTLIADVRNTGRFSPETFEAEWLDGATGPALGARFRGHVRRNGI 66
MEGSATVHMAAP KIW LIADVRN GRFSPE FEAEWL GATGPALGA+FRGHVRRN I
Sbjct 1 MEGSATVHMAAPAAKIWDLIADVRNMGRFSPEVFEAEWLGGATGPALGAKFRGHVRRNEI 60
Query 67 GPVYW-----TVCEPGREFGFAVLLGDRPVNNWHYRLTPTADGTEVTESFRLPPSVLTTV 121
GPVYW T CEPGREFGF VLLGDR VNNWHYRL P+ GT+VTESFRL P+ V
Sbjct 61 GPVYWTTCKVTACEPGREFGFTVLLGDREVNNWHYRLAPSGGGTDVTESFRLNPAPWLPV 120
Query 122 YYRVFGGWLRQRRNIRDMTKTLQRIKDLVEA 152
Y+ VFGG+LR+RRNIRDMTKTL RIKD+VEA
Sbjct 121 YW-VFGGFLRKRRNIRDMTKTLNRIKDVVEA 150
>gi|342859532|ref|ZP_08716185.1| cyclase/dehydrase [Mycobacterium colombiense CECT 3035]
gi|342132664|gb|EGT85884.1| cyclase/dehydrase [Mycobacterium colombiense CECT 3035]
Length=151
Score = 232 bits (591), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 116/152 (77%), Positives = 128/152 (85%), Gaps = 6/152 (3%)
Query 7 MEGSATVHMAAPPDKIWTLIADVRNTGRFSPETFEAEWLDGATGPALGARFRGHVRRNGI 66
MEGSATVHMAAP KIW LIADVRNTG+FSPE FEAEWL ATGPALGA+FRGHV+RN +
Sbjct 1 MEGSATVHMAAPAAKIWDLIADVRNTGKFSPEVFEAEWLGDATGPALGAKFRGHVKRNEM 60
Query 67 GPVYW-----TVCEPGREFGFAVLLGDRPVNNWHYRLTPTADGTEVTESFRLPPSVLTTV 121
GPVYW T CEPGREFGF VLLGDRPVNNWHYRL P+ GT+VTESFRL P+ V
Sbjct 61 GPVYWTTCKVTACEPGREFGFTVLLGDRPVNNWHYRLAPSDGGTDVTESFRLNPAPWLGV 120
Query 122 YYRVFGGWLRQRRNIRDMTKTLQRIKDLVEAG 153
Y+ +FGG+LR+RRNIRDMTKTL RIKD+VEAG
Sbjct 121 YW-LFGGFLRKRRNIRDMTKTLNRIKDVVEAG 151
>gi|15828098|ref|NP_302361.1| hypothetical protein ML2031 [Mycobacterium leprae TN]
gi|221230575|ref|YP_002503991.1| hypothetical protein MLBr_02031 [Mycobacterium leprae Br4923]
gi|13093652|emb|CAC30986.1| conserved hypothetical protein [Mycobacterium leprae]
gi|219933682|emb|CAR72128.1| conserved hypothetical protein [Mycobacterium leprae Br4923]
Length=151
Score = 232 bits (591), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 115/151 (77%), Positives = 126/151 (84%), Gaps = 6/151 (3%)
Query 7 MEGSATVHMAAPPDKIWTLIADVRNTGRFSPETFEAEWLDGATGPALGARFRGHVRRNGI 66
MEGS TVHMAAP DK+W LIADVRNTGRFSPETFEAEWLD TGPAL A+FRGHVRRN I
Sbjct 1 MEGSVTVHMAAPADKVWNLIADVRNTGRFSPETFEAEWLDDVTGPALNAKFRGHVRRNEI 60
Query 67 GPVYW-----TVCEPGREFGFAVLLGDRPVNNWHYRLTPTADGTEVTESFRLPPSVLTTV 121
GPVYW T CEPGREFGF VLLG++PVNNWHYRL + DGT VTESFR S L TV
Sbjct 61 GPVYWTTCKVTACEPGREFGFTVLLGNKPVNNWHYRLVTSGDGTYVTESFRFNRSPLLTV 120
Query 122 YYRVFGGWLRQRRNIRDMTKTLQRIKDLVEA 152
Y+ + GG+LR+RRNIRDMTKTL+RIKD+VEA
Sbjct 121 YW-LLGGFLRKRRNIRDMTKTLRRIKDVVEA 150
>gi|296164902|ref|ZP_06847458.1| cyclase/dehydrase [Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295899744|gb|EFG79194.1| cyclase/dehydrase [Mycobacterium parascrofulaceum ATCC BAA-614]
Length=155
Score = 230 bits (587), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 114/156 (74%), Positives = 128/156 (83%), Gaps = 6/156 (3%)
Query 3 LDQVMEGSATVHMAAPPDKIWTLIADVRNTGRFSPETFEAEWLDGATGPALGARFRGHVR 62
+DQ MEGSATVHMAA +KIW LIA+V N GRFSPE FEAEWL ATGPALGA+FRGHVR
Sbjct 1 MDQAMEGSATVHMAASANKIWDLIANVDNIGRFSPEVFEAEWLGDATGPALGAKFRGHVR 60
Query 63 RNGIGPVYW-----TVCEPGREFGFAVLLGDRPVNNWHYRLTPTADGTEVTESFRLPPSV 117
RN IGPVYW T CEPGREFGFAVLLGDR VNNWHYRL P+ GT+VTESFRL P+
Sbjct 61 RNEIGPVYWTTCEVTACEPGREFGFAVLLGDRAVNNWHYRLAPSGGGTDVTESFRLSPAP 120
Query 118 LTTVYYRVFGGWLRQRRNIRDMTKTLQRIKDLVEAG 153
+Y+ + GG+LR+RRN+RDMTKTL RIKD+VEAG
Sbjct 121 WLGLYW-LLGGFLRKRRNVRDMTKTLNRIKDVVEAG 155
>gi|254775298|ref|ZP_05216814.1| cyclase/dehydrase superfamily protein [Mycobacterium avium subsp.
avium ATCC 25291]
Length=153
Score = 230 bits (587), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 117/151 (78%), Positives = 125/151 (83%), Gaps = 6/151 (3%)
Query 7 MEGSATVHMAAPPDKIWTLIADVRNTGRFSPETFEAEWLDGATGPALGARFRGHVRRNGI 66
MEGSATVHMAAP KIW LIADVRN GRFSPE FEAEWL G TGPALGA+FRGHVRRN I
Sbjct 1 MEGSATVHMAAPAAKIWDLIADVRNMGRFSPEVFEAEWLGGTTGPALGAKFRGHVRRNEI 60
Query 67 GPVYW-----TVCEPGREFGFAVLLGDRPVNNWHYRLTPTADGTEVTESFRLPPSVLTTV 121
GPVYW T CEPGREFGF VLLGDR VNNWHYRL P+ GT+VTESFRL P+ V
Sbjct 61 GPVYWTTCKVTACEPGREFGFTVLLGDREVNNWHYRLAPSGGGTDVTESFRLNPAPWLPV 120
Query 122 YYRVFGGWLRQRRNIRDMTKTLQRIKDLVEA 152
Y+ VFGG+LR+RRNIRDMTKTL RIKD+VEA
Sbjct 121 YW-VFGGFLRKRRNIRDMTKTLNRIKDVVEA 150
>gi|254819298|ref|ZP_05224299.1| cyclase/dehydrase superfamily protein [Mycobacterium intracellulare
ATCC 13950]
Length=153
Score = 228 bits (582), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 115/151 (77%), Positives = 126/151 (84%), Gaps = 6/151 (3%)
Query 7 MEGSATVHMAAPPDKIWTLIADVRNTGRFSPETFEAEWLDGATGPALGARFRGHVRRNGI 66
MEGSATVHMAAP KIW LIADVRNTGRFSPE FEAEWL ATGPALGA+FRGHVRRN +
Sbjct 1 MEGSATVHMAAPAAKIWDLIADVRNTGRFSPEVFEAEWLGDATGPALGAKFRGHVRRNEM 60
Query 67 GPVYW-----TVCEPGREFGFAVLLGDRPVNNWHYRLTPTADGTEVTESFRLPPSVLTTV 121
GPVYW T C+PGREFGF VLLGDR VNNWHYRL P+ GT+VTESFRL P+ V
Sbjct 61 GPVYWTTCKVTACDPGREFGFTVLLGDREVNNWHYRLAPSGGGTDVTESFRLNPAPWLGV 120
Query 122 YYRVFGGWLRQRRNIRDMTKTLQRIKDLVEA 152
Y+ +FGG+LR+RRNIRDMTKTL RIKD+VEA
Sbjct 121 YW-LFGGFLRKRRNIRDMTKTLNRIKDVVEA 150
>gi|333990612|ref|YP_004523226.1| hypothetical protein JDM601_1972 [Mycobacterium sp. JDM601]
gi|333486580|gb|AEF35972.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=144
Score = 216 bits (551), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 105/142 (74%), Positives = 116/142 (82%), Gaps = 5/142 (3%)
Query 15 MAAPPDKIWTLIADVRNTGRFSPETFEAEWLDGATGPALGARFRGHVRRNGIGPVYWTVC 74
MAAP ++IW L+ADVRN GRFSPETFEAEWLDGATGP +GARFRGHVRRNGIGPVYWT C
Sbjct 1 MAAPAERIWDLVADVRNIGRFSPETFEAEWLDGATGPEVGARFRGHVRRNGIGPVYWTTC 60
Query 75 -----EPGREFGFAVLLGDRPVNNWHYRLTPTADGTEVTESFRLPPSVLTTVYYRVFGGW 129
EP R FGF VL GDR VN W Y LTPTADGT VTESFRL S LT+VYY +FGG+
Sbjct 61 RVTECEPNRVFGFEVLAGDRAVNRWSYELTPTADGTHVTESFRLADSFLTSVYYYLFGGF 120
Query 130 LRQRRNIRDMTKTLQRIKDLVE 151
LRQR NIRDM +TL+RI+D+ E
Sbjct 121 LRQRNNIRDMRRTLERIRDVAE 142
>gi|325002365|ref|ZP_08123477.1| hypothetical protein PseP1_26552 [Pseudonocardia sp. P1]
Length=162
Score = 194 bits (493), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 96/150 (64%), Positives = 113/150 (76%), Gaps = 6/150 (4%)
Query 7 MEGSATVHMAAPPDKIWTLIADVRNTGRFSPETFEAEWLDGATGPALGARFRGHVRRNGI 66
M TVH+ AP +IW L+ADVRNTGRFSPET EAEWLDGATGPA GARFRGHV+RNG
Sbjct 1 MRDEVTVHVRAPAHEIWELVADVRNTGRFSPETLEAEWLDGATGPAPGARFRGHVKRNGR 60
Query 67 GPVYWTV-----CEPGREFGFAVLLGDRPVNNWHYRLTPTADGTEVTESFRLPPSVLTTV 121
GP+YWTV CEPGREFGFAVL G R +N WHYR TP DGT+VTESF L +V T +
Sbjct 61 GPMYWTVCRVTACEPGREFGFAVLAGSRTINTWHYRFTPAGDGTDVTESFALADNVGTRI 120
Query 122 YYRVFGGWLRQRRNIRDMTKTLQRIKDLVE 151
Y+ + G R+R N+R MT+TL RI+++ E
Sbjct 121 YWAI-AGRARRRTNLRGMTETLHRIREVAE 149
>gi|119868815|ref|YP_938767.1| cyclase/dehydrase [Mycobacterium sp. KMS]
gi|119694904|gb|ABL91977.1| cyclase/dehydrase [Mycobacterium sp. KMS]
Length=153
Score = 192 bits (488), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 105/150 (70%), Positives = 117/150 (78%), Gaps = 6/150 (4%)
Query 7 MEGSATVHMAAPPDKIWTLIADVRNTGRFSPETFEAEWLDGATGPALGARFRGHVRRNGI 66
M+GS +V M AP ++IW L+ADVRNTGRFSPE EAEWLDGA GPALGARFRGHVRRN I
Sbjct 1 MQGSVSVTMNAPAERIWDLVADVRNTGRFSPEVMEAEWLDGAAGPALGARFRGHVRRNEI 60
Query 67 GPVYW-----TVCEPGREFGFAVLLGDRPVNNWHYRLTPTADGTEVTESFRLPPSVLTTV 121
GPVYW T CEPGREFGF VL+GDR VNNWHYR TP GTEVTESF L S L V
Sbjct 61 GPVYWTTCRVTACEPGREFGFEVLVGDRAVNNWHYRFTPVDGGTEVTESFHLEDSALMRV 120
Query 122 YYRVFGGWLRQRRNIRDMTKTLQRIKDLVE 151
+ V GG LR+RRN+RDM KTL+RI+ +VE
Sbjct 121 FA-VAGGQLRRRRNLRDMRKTLERIRSVVE 149
>gi|126435349|ref|YP_001071040.1| cyclase/dehydrase [Mycobacterium sp. JLS]
gi|126235149|gb|ABN98549.1| cyclase/dehydrase [Mycobacterium sp. JLS]
Length=153
Score = 187 bits (476), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 103/150 (69%), Positives = 115/150 (77%), Gaps = 6/150 (4%)
Query 7 MEGSATVHMAAPPDKIWTLIADVRNTGRFSPETFEAEWLDGATGPALGARFRGHVRRNGI 66
M+GS +V M AP ++IW L+ADVRNTGR SPE EAEWLDGA GPALGARFRGHVRRN I
Sbjct 1 MQGSVSVTMNAPAERIWDLVADVRNTGRLSPEVMEAEWLDGAAGPALGARFRGHVRRNEI 60
Query 67 GPVYW-----TVCEPGREFGFAVLLGDRPVNNWHYRLTPTADGTEVTESFRLPPSVLTTV 121
GPVYW T CEPGREFGF VL+GDR VNNW YR TP GTEVTESF L S L V
Sbjct 61 GPVYWTTCRVTACEPGREFGFEVLVGDRAVNNWQYRFTPVDGGTEVTESFHLEDSALMRV 120
Query 122 YYRVFGGWLRQRRNIRDMTKTLQRIKDLVE 151
+ V GG LR+RRN+RDM KTL+RI+ +VE
Sbjct 121 FA-VAGGQLRRRRNLRDMRKTLERIRSVVE 149
>gi|108799705|ref|YP_639902.1| cyclase/dehydrase [Mycobacterium sp. MCS]
gi|108770124|gb|ABG08846.1| cyclase/dehydrase [Mycobacterium sp. MCS]
Length=147
Score = 183 bits (465), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 101/142 (72%), Positives = 111/142 (79%), Gaps = 6/142 (4%)
Query 15 MAAPPDKIWTLIADVRNTGRFSPETFEAEWLDGATGPALGARFRGHVRRNGIGPVYW--- 71
M AP ++IW L+ADVRNTGRFSPE EAEWLDGA GPALGARFRGHVRRN IGPVYW
Sbjct 3 MNAPAERIWDLVADVRNTGRFSPEVMEAEWLDGAAGPALGARFRGHVRRNEIGPVYWTTC 62
Query 72 --TVCEPGREFGFAVLLGDRPVNNWHYRLTPTADGTEVTESFRLPPSVLTTVYYRVFGGW 129
T CEPGREFGF VL+GDR VNNWHYR TP GTEVTESF L S L V+ V GG
Sbjct 63 RVTACEPGREFGFEVLVGDRAVNNWHYRFTPVDGGTEVTESFHLEDSALMRVFA-VAGGQ 121
Query 130 LRQRRNIRDMTKTLQRIKDLVE 151
LR+RRN+RDM KTL+RI+ +VE
Sbjct 122 LRRRRNLRDMRKTLERIRSVVE 143
>gi|169631033|ref|YP_001704682.1| hypothetical protein MAB_3954c [Mycobacterium abscessus ATCC
19977]
gi|169243000|emb|CAM64028.1| Conserved hypothetical protein [Mycobacterium abscessus]
Length=152
Score = 175 bits (444), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 90/152 (60%), Positives = 107/152 (71%), Gaps = 7/152 (4%)
Query 7 MEGSATVHMAAPPDKIWTLIADVRNTGRFSPETFEAEWLDGATGPALGARFRGHVRRNGI 66
M S TVH+AAP DKIW L++D+ NTG+FSPETFEAEWLDGAT PA+G RFRGHV+RN
Sbjct 1 MRDSVTVHIAAPADKIWALVSDITNTGKFSPETFEAEWLDGATEPAVGVRFRGHVKRNQK 60
Query 67 GPVYWTV-----CEPGREFGFAVLLGD-RPVNNWHYRLTPTADGTEVTESFRLPPSVLTT 120
GPVYWTV CE GR FGFAVL + + VN W YR P DGT+VTESF L P++
Sbjct 61 GPVYWTVCRVVECERGRSFGFAVLWPNGKTVNTWRYRFEPAGDGTDVTESFELAPTLPLR 120
Query 121 VYYRVFGGWLRQRRNIRDMTKTLQRIKDLVEA 152
+Y+ + GW R R N M +TL RIK + EA
Sbjct 121 IYWALL-GWARGRTNRNGMRETLNRIKAVAEA 151
>gi|119718772|ref|YP_925737.1| activator of Hsp90 ATPase 1 family protein [Nocardioides sp.
JS614]
gi|119539433|gb|ABL84050.1| Activator of Hsp90 ATPase 1 family protein [Nocardioides sp.
JS614]
Length=161
Score = 150 bits (379), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 79/155 (51%), Positives = 95/155 (62%), Gaps = 6/155 (3%)
Query 3 LDQVMEGSATVHMAAPPDKIWTLIADVRNTGRFSPETFEAEWLDGATGPALGARFRGHVR 62
L M G TV M APP+K+W L++DV G FSPETFEA W G+TGP +GA F+GHVR
Sbjct 8 LSGPMTGEVTVRMEAPPEKVWALVSDVTRIGEFSPETFEARWTRGSTGPEVGASFKGHVR 67
Query 63 RNGIGPVYW-----TVCEPGREFGFAVLLGDRPVNNWHYRLTPTADGTEVTESFRLPPSV 117
RNG+GP YW T C P + F FAV VNNW YRL P GT VTE FRL P
Sbjct 68 RNGVGPTYWSPCQVTACVPNQLFEFAVGTDQVTVNNWGYRLEPDGTGTRVTEYFRLEPKP 127
Query 118 LTTVYYRVFGGWLRQRRNIRDMTKTLQRIKDLVEA 152
Y+ + G LR R N R M TL+R+K ++E+
Sbjct 128 YLRAYWLLLGR-LRGRTNERGMRTTLERMKAVIES 161
>gi|297161063|gb|ADI10775.1| hypothetical protein SBI_07655 [Streptomyces bingchenggensis
BCW-1]
Length=151
Score = 98.2 bits (243), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/153 (40%), Positives = 82/153 (54%), Gaps = 17/153 (11%)
Query 12 TVHMAAPPDKIWTLIADVRNTGRFSPETFEAEWLDGATGPALGARFRGHVRRNGIGPVYW 71
++ +AAPP+++W L++DV GRFSPE W+ A+GPALGARFRG RR G ++W
Sbjct 5 SISIAAPPERVWRLVSDVTGMGRFSPECKGGRWVAPASGPALGARFRGRNRR---GLIFW 61
Query 72 TV------CEPGREFGFAVLLGDRPVNNWHYRLTPTADG-----TEVTESFRLPPSVLTT 120
T CE G+ F F V + W YR+ P DG TE E F P ++
Sbjct 62 TTDCTVVECEEGKVFAFEVA---QSKVRWGYRIEPDGDGDGVVLTEWREHFGRPHLLIRA 118
Query 121 VYYRVFGGWLRQRRNIRDMTKTLQRIKDLVEAG 153
V G+ R+R + M TL RIK++ E G
Sbjct 119 VDASGLVGFRRERLMVEGMRTTLGRIKEVAERG 151
>gi|288919447|ref|ZP_06413779.1| cyclase/dehydrase [Frankia sp. EUN1f]
gi|288349141|gb|EFC83386.1| cyclase/dehydrase [Frankia sp. EUN1f]
Length=430
Score = 90.9 bits (224), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 55/151 (37%), Positives = 82/151 (55%), Gaps = 14/151 (9%)
Query 6 VMEGSATVHMAAPPDKIWTLIADVRNTGRFSPETFEAEWLDGATGPALGARFRGHVRRNG 65
++ GSA + + AP D+++ +ADV R SPE + WLDGA+GPA+GARFRG R G
Sbjct 268 LLRGSAEIFVPAPADQVYAAVADVAGMARHSPECYRCVWLDGASGPAVGARFRGWNRSRG 327
Query 66 IGPVYWT------VCEPGREFGFAV-LLGDRPVNN-WHYRLTPTADGTEVTESFRLPPSV 117
+ W+ EPGREF + +P + W ++L GT +T++F L PS
Sbjct 328 M---RWSRECEVVTAEPGREFAYRTRRTRSKPDSTLWRFQLRAHDGGTHLTQTFELSPSA 384
Query 118 LTTVYYRVFGGWLRQRRNIRDMTKTLQRIKD 148
L + R+ G R M +TL+R++D
Sbjct 385 LVLRFERLSG---RDVSTPVAMRQTLERLRD 412
>gi|240169531|ref|ZP_04748190.1| cyclase/dehydrase [Mycobacterium kansasii ATCC 12478]
Length=156
Score = 80.9 bits (198), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/153 (36%), Positives = 81/153 (53%), Gaps = 16/153 (10%)
Query 9 GSATVHMAAPPDKIWTLIADVRNTGRFSPETFEAEWLDGATGPALGARFRGHVRRNGIGP 68
G ++ ++APPD ++ L+ADV G +SPE + EWLDG + A GARFRG+ N +G
Sbjct 7 GQESIDISAPPDLVYDLVADVTRMGDWSPECYRCEWLDGVSTAAPGARFRGY---NRLGL 63
Query 69 VYWT------VCEPGREFGFAVLL--GDRPVNNWHYRLTPT-ADGTEVTESFRLPPSVLT 119
+ W E GREF F + R W Y + PT + GT +TESF +
Sbjct 64 MRWERTAVVGTAERGREFSFTTVNDGAGREETRWRYTMEPTPSGGTLLTESFEF---LWC 120
Query 120 TVYYRVFGGWL-RQRRNIRDMTKTLQRIKDLVE 151
++ R+ + R R+ R + +TL+RIK E
Sbjct 121 SMVNRLAEAAIPRGRQMDRGIQETLRRIKKAAE 153
>gi|158316323|ref|YP_001508831.1| cyclase/dehydrase [Frankia sp. EAN1pec]
gi|158111728|gb|ABW13925.1| cyclase/dehydrase [Frankia sp. EAN1pec]
Length=432
Score = 80.5 bits (197), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 53/150 (36%), Positives = 75/150 (50%), Gaps = 14/150 (9%)
Query 7 MEGSATVHMAAPPDKIWTLIADVRNTGRFSPETFEAEWLDGATGPALGARFRGHVRRNGI 66
+ G A + + A P++++ IADV R SPE + WLDGA P GARFRG R G
Sbjct 248 LRGQAEIVIEATPEQVYEAIADVIRMARHSPECYRCAWLDGAAAPLPGARFRGWNRFRG- 306
Query 67 GPVYWT------VCEPGREFGF-AVLLGDRPVNN-WHYRLTPTADGTEVTESFRLPPSVL 118
W+ EPG F + V RP + W + LTPTA GT + ++F L +
Sbjct 307 --ARWSRECEIVTAEPGVAFAYRTVRTSTRPDSTLWRFELTPTAAGTRLRQTFELSGAAP 364
Query 119 TTVYYRVFGGWLRQRRNIRDMTKTLQRIKD 148
V+ R+ G R + M +TL R++D
Sbjct 365 VMVFERLSG---RTTSTPKAMARTLARLRD 391
>gi|324999788|ref|ZP_08120900.1| hypothetical protein PseP1_13516 [Pseudonocardia sp. P1]
Length=150
Score = 75.5 bits (184), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/154 (36%), Positives = 73/154 (48%), Gaps = 19/154 (12%)
Query 11 ATVHMAAPPDKIWTLIADVRNTGRFSPETFEAEWLDGATGPALGARFRGHVRRNGIGPVY 70
A V + APP+K+W L++D+ G +SPE W DGATGPA+G RF G R G +
Sbjct 4 AEVTVDAPPEKVWDLVSDITRAGEWSPEATGGRWRDGATGPAVGGRFVGGNRH---GAIR 60
Query 71 W------TVCEPGREFGFAVLLGDRPVNNWHYRLTPTADGTEVT------ESFRLPPSVL 118
W T CEP R F F V W + LTP ADG T ES PP +
Sbjct 61 WSTHCRVTECEPARRFTFVV---SESRTAWGWVLTP-ADGGAATQLTAWRESVGRPPLPV 116
Query 119 TTVYYRVFGGWLRQRRNIRDMTKTLQRIKDLVEA 152
+ G R+ + ++L R++ +VE
Sbjct 117 RLLQRSGLLGRDREGMMRDGLQRSLDRVRSIVEG 150
>gi|240168128|ref|ZP_04746787.1| hypothetical protein MkanA1_02357 [Mycobacterium kansasii ATCC
12478]
Length=171
Score = 74.3 bits (181), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/158 (33%), Positives = 75/158 (48%), Gaps = 19/158 (12%)
Query 11 ATVHMAAPPDKIWTLIADVRNTGRFSPETFEAEWLDGATGPALGARFRGHVRRNGIGPVY 70
A+ + A P+++W+L+ DV S E EW+DGATGP +GARF GH + + G
Sbjct 16 ASTWIDADPERVWSLVCDVELMPTLSNELQAVEWVDGATGPRIGARFVGHNQHDAFGE-- 73
Query 71 WTV------CEPGREFGFAVLLGDRPVNNWHYRLTPTADGTEVTESFRLPP--------- 115
W+ C+ EF +AV D P W +RLTP GT +T ++ P
Sbjct 74 WSTTSQIVSCDEPHEFAWAVGEPDNPSATWRFRLTPRDGGTVLTYRTQMGPGRSGLSRAI 133
Query 116 SVLTTVYYRVFGGWLRQRRNIRDMTKTLQRIKDLVEAG 153
+ ++ ++R R + KTL IK L E G
Sbjct 134 DAMPDKEQKIV--FVRLREFETAIDKTLAAIKRLAEHG 169
>gi|111020928|ref|YP_703900.1| hypothetical protein RHA1_ro03945 [Rhodococcus jostii RHA1]
gi|110820458|gb|ABG95742.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length=154
Score = 73.6 bits (179), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/152 (37%), Positives = 74/152 (49%), Gaps = 16/152 (10%)
Query 10 SATVHMAAPPDKIWTLIADVRNTGRFSPETFEAEWLDGATGPALGARFRGHVRRNGIGPV 69
SA++ + PP K+W ++ DV GRFSPE A W G T +GARF G R GPV
Sbjct 10 SASILIDVPPGKVWNVVTDVEGMGRFSPENTGARWKSG-TPAMVGARFIGANRH---GPV 65
Query 70 YW-TVCE-----PGREFGFAVLLGDRPVNNWHYRLTPTADGTEVTES---FRLPPSVLTT 120
W T C PGR+F F D P W Y L P+ GT VTE+ + P +
Sbjct 66 RWKTHCTVVDVIPGRKFSFE---ADEPKARWTYHLEPSGAGTLVTETREIYATPVWWVRL 122
Query 121 VYYRVFGGWLRQRRNIRDMTKTLQRIKDLVEA 152
V G R + M +TL+R+K +E+
Sbjct 123 VQKSKVLGSNRDQLMQDGMRQTLERMKVALES 154
>gi|340527528|gb|AEK42733.1| hypothetical protein RAM_21265 [Amycolatopsis mediterranei S699]
Length=157
Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/148 (39%), Positives = 74/148 (50%), Gaps = 15/148 (10%)
Query 10 SATVHMAAPPDKIWTLIADVRNTGRFSPETFEAEWLDGATGPALGARFRGHVRRNGIGPV 69
S +V ++A P +W+ + D+ G SPE WLDG TGPALGARFRG RN G +
Sbjct 6 SRSVTVSADPGTVWSWVTDLPRMGELSPENVGGRWLDG-TGPALGARFRG---RNRNGEL 61
Query 70 YW------TVCEPGREFGFAVL--LGDRPVNNWHYRLTPTADGTEVTESFRLPPSVLTTV 121
W V EP R F F V G R V+ W Y L P A G VTE++ S +
Sbjct 62 QWWTRVRVVVFEPDRRFAFDVRTPFGSR-VSRWEYVLAPAAGGCVVTENWYRIGSWVVRK 120
Query 122 YY--RVFGGWLRQRRNIRDMTKTLQRIK 147
+ RV G R N+R + TL ++
Sbjct 121 FMGPRVTGRADRPGYNVRSIEHTLAALQ 148
>gi|302544826|ref|ZP_07297168.1| cyclase/dehydrase [Streptomyces hygroscopicus ATCC 53653]
gi|302462444|gb|EFL25537.1| cyclase/dehydrase [Streptomyces himastatinicus ATCC 53653]
Length=120
Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/100 (43%), Positives = 55/100 (55%), Gaps = 8/100 (8%)
Query 15 MAAPPDKIWTLIADVRNTGRFSPETFEAEWLDGATGPALGARFRGHVRRNGIGPVYWTVC 74
MAA P ++ LIADV G +SPE AEWL+G G A+G+ FRGH RR + + T+C
Sbjct 1 MAADPQDVYELIADVTRIGEWSPEATGAEWLNGEPG-AVGSTFRGHNRRPWVK--WSTIC 57
Query 75 E-----PGREFGFAVLLGDRPVNNWHYRLTPTADGTEVTE 109
PG+ F F V RPV W + P G EVT+
Sbjct 58 TVTAAGPGKRFAFDVKAAGRPVAAWELEIVPRDGGCEVTQ 97
>gi|134096650|ref|YP_001102311.1| hypothetical protein SACE_0032 [Saccharopolyspora erythraea NRRL
2338]
gi|291005696|ref|ZP_06563669.1| hypothetical protein SeryN2_14344 [Saccharopolyspora erythraea
NRRL 2338]
gi|133909273|emb|CAL99385.1| hypothetical protein SACE_0032 [Saccharopolyspora erythraea NRRL
2338]
Length=166
Score = 71.6 bits (174), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/156 (34%), Positives = 80/156 (52%), Gaps = 18/156 (11%)
Query 11 ATVHMAAPPDKIWTLIADVRNTGRFSPETFEAEWLDGATGPALGARFRGHVRRNGIGPVY 70
AT + A PD+++ +++D+ G +SPE EWL G G A G+RF GH R G +
Sbjct 13 ATTEVDASPDEVYRVVSDITRMGEWSPECTGGEWLRGQPG-AAGSRFHGHNRAG--GETW 69
Query 71 WTVCE-----PGREFGFAVLLGDRP--VNNWHYRLTPTADGTEVTESFRL--PPSVLTTV 121
T CE PGREF +AVL R V+ W + + P DG +T+ +R+ PP+ +
Sbjct 70 TTECEVVAAVPGREFAWAVLTYARSPEVSVWSFAIEPDGDGCVLTQRYRMQEPPARFASF 129
Query 122 YY-----RVFGGWLRQRRNIRD-MTKTLQRIKDLVE 151
+ ++R + D M++T+ IK VE
Sbjct 130 MRGMDADQAAALGAKRRAMLEDAMSRTVAGIKAAVE 165
>gi|29833944|ref|NP_828578.1| cyclase/dehydrase [Streptomyces avermitilis MA-4680]
gi|29611069|dbj|BAC75113.1| putative cyclase/dehydrase [Streptomyces avermitilis MA-4680]
Length=203
Score = 71.2 bits (173), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/154 (36%), Positives = 72/154 (47%), Gaps = 15/154 (9%)
Query 13 VHMAAPPDKIWTLIADVRNTGRFSPETFEAEWLDGATGPALGARFRGHVRRNGIGPVYWT 72
V + APP ++W L++D+ R SPE EWLDG GPALGARF G +G W
Sbjct 46 VWIDAPPQRVWELVSDIALMPRTSPELQSVEWLDGRRGPALGARFVGRSSHEALG--EWA 103
Query 73 VC------EPGREFGFAVLLGDRPVNNWHYRLTPTADGTEVTESFRLPP--SVLTTVYYR 124
EP R F +AV + P + W + L GT + E +L P S L+ R
Sbjct 104 TTSHVVRYEPPRVFAWAVEDPELPSSVWRFELEERDGGTLLREWMQLGPGRSGLSYAIDR 163
Query 125 VFGG-----WLRQRRNIRDMTKTLQRIKDLVEAG 153
+ ++R R +M TL IK L E G
Sbjct 164 MPDKEQKIVFVRMREFETNMGATLDVIKKLAEGG 197
>gi|226363224|ref|YP_002781006.1| hypothetical protein ROP_38140 [Rhodococcus opacus B4]
gi|226241713|dbj|BAH52061.1| hypothetical protein [Rhodococcus opacus B4]
Length=147
Score = 70.9 bits (172), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/152 (37%), Positives = 73/152 (49%), Gaps = 16/152 (10%)
Query 10 SATVHMAAPPDKIWTLIADVRNTGRFSPETFEAEWLDGATGPALGARFRGHVRRNGIGPV 69
SA++ + P ++W ++ DV GRFSPE A W G T +GARF G R GPV
Sbjct 3 SASILIDVPATEVWGVVTDVEGMGRFSPENTGARWTSG-TPATVGARFVGANRH---GPV 58
Query 70 YW-TVCE-----PGREFGFAVLLGDRPVNNWHYRLTPTADGTEVTES---FRLPPSVLTT 120
W T C PG+ F F D P W YRL P+ GT VTE+ + P +
Sbjct 59 RWKTHCTVVDVVPGQTFSFE---ADEPKARWTYRLEPSGSGTLVTETREIYATPVWWVRL 115
Query 121 VYYRVFGGWLRQRRNIRDMTKTLQRIKDLVEA 152
V G R R M +TL+R+K +E+
Sbjct 116 VQKSKVLGSNRDRLMQDGMRQTLERMKVALES 147
>gi|300786063|ref|YP_003766354.1| hypothetical protein AMED_4175 [Amycolatopsis mediterranei U32]
gi|299795577|gb|ADJ45952.1| conserved hypothetical protein [Amycolatopsis mediterranei U32]
Length=149
Score = 70.9 bits (172), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/143 (39%), Positives = 71/143 (50%), Gaps = 15/143 (10%)
Query 15 MAAPPDKIWTLIADVRNTGRFSPETFEAEWLDGATGPALGARFRGHVRRNGIGPVYW--- 71
++A P +W+ + D+ G SPE WLDG TGPALGARFRG RN G + W
Sbjct 3 VSADPGTVWSWVTDLPRMGELSPENVGGRWLDG-TGPALGARFRG---RNRNGELQWWTR 58
Query 72 ---TVCEPGREFGFAVL--LGDRPVNNWHYRLTPTADGTEVTESFRLPPSVLTTVYY--R 124
V EP R F F V G R V+ W Y L P A G VTE++ S + + R
Sbjct 59 VRVVVFEPDRRFAFDVRTPFGSR-VSRWEYVLAPAAGGCVVTENWYRIGSWVVRKFMGPR 117
Query 125 VFGGWLRQRRNIRDMTKTLQRIK 147
V G R N+R + TL ++
Sbjct 118 VTGRADRPGYNVRSIEHTLAALQ 140
>gi|296167317|ref|ZP_06849719.1| cyclase/dehydrase [Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295897261|gb|EFG76865.1| cyclase/dehydrase [Mycobacterium parascrofulaceum ATCC BAA-614]
Length=174
Score = 70.5 bits (171), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/156 (32%), Positives = 76/156 (49%), Gaps = 15/156 (9%)
Query 11 ATVHMAAPPDKIWTLIADVRNTGRFSPETFEAEWLDGATGPALGARFRGHVRRNGIGPVY 70
A+ + A P ++W+L++D++ S E EW +GA P +GARF GH + G
Sbjct 19 ASTWIDADPARVWSLVSDIKLMPTLSNELQAVEWAEGADAPRVGARFVGHNQNEAFG--Q 76
Query 71 WT------VCEPGREFGFAVLLGDRPVNNWHYRLTPTADGTEVTESFRLPP--SVLTTVY 122
W+ C+ REF +AV +RP W +RLTP GT+++ ++ P S L+
Sbjct 77 WSSTSQIVACDEPREFAWAVGEPERPAAAWRFRLTPRDGGTDLSYWMQMGPGRSGLSVAI 136
Query 123 YRVFGG-----WLRQRRNIRDMTKTLQRIKDLVEAG 153
+ ++R R + KTL IK L E G
Sbjct 137 EAMPDKEQKIVFVRLREIEAAIDKTLATIKRLAEHG 172
>gi|118619838|ref|YP_908170.1| hypothetical protein MUL_4783 [Mycobacterium ulcerans Agy99]
gi|183980368|ref|YP_001848659.1| hypothetical protein MMAR_0337 [Mycobacterium marinum M]
gi|118571948|gb|ABL06699.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99]
gi|183173694|gb|ACC38804.1| conserved hypothetical protein [Mycobacterium marinum M]
Length=174
Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/156 (33%), Positives = 74/156 (48%), Gaps = 15/156 (9%)
Query 11 ATVHMAAPPDKIWTLIADVRNTGRFSPETFEAEWLDGATGPALGARFRGHVRRNGIGPVY 70
A+ + A P+++W+LI+D+ S E EW+ G + P +GARF GH + G
Sbjct 19 ASTWIDAEPERVWSLISDIALMPTLSNELQAVEWVGGVSEPRVGARFIGHNQHEAFG--Q 76
Query 71 WTV------CEPGREFGFAVLLGDRPVNNWHYRLTPTADGTEVTESFRLPP--SVLTTVY 122
WT C+P REF +AV D P W +RL P GT +T ++ P S L+
Sbjct 77 WTSTSQVVRCDPPREFAWAVGEPDYPAAVWRFRLVPRDGGTNLTYRTQIGPGRSGLSNAI 136
Query 123 YRVFGG-----WLRQRRNIRDMTKTLQRIKDLVEAG 153
+ ++R R + KTL IK L E G
Sbjct 137 DAMPDKEEKIVFVRLREFEAAIDKTLAAIKRLAEHG 172
>gi|325002254|ref|ZP_08123366.1| hypothetical protein PseP1_25991 [Pseudonocardia sp. P1]
Length=155
Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/143 (38%), Positives = 67/143 (47%), Gaps = 16/143 (11%)
Query 19 PDKIWTLIADVRNTGRFSPETFEAEWLDGATGPALGARFRGHVRRNGIGPVYW------T 72
P+ ++ L++D+ G +SPE W+ TGP +GARF G RR G W T
Sbjct 16 PETVYHLVSDLPRMGEWSPENTGGRWVGTPTGPVVGARFAGTNRR---GLRRWPTTTVVT 72
Query 73 VCEPGREFGFAVLLGDRPVNNWHYRLTPTADGTEVTES---FRLPPSVLTTVYYRVFGGW 129
PGR F F LG W Y +TPT G EVTES R P V RV G
Sbjct 73 DATPGRRFAFETRLGPVTAAEWIYEITPTGTGCEVTESWVDLRRAPVV---AIGRVVTGV 129
Query 130 LRQRRNIRDM-TKTLQRIKDLVE 151
+ RDM T TL+++K E
Sbjct 130 RDRAAFTRDMLTTTLEKLKATAE 152
>gi|1654412|gb|AAB17876.1| Nsh-OrfB [Streptomyces actuosus]
Length=173
Score = 67.4 bits (163), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 53/100 (53%), Gaps = 9/100 (9%)
Query 15 MAAPPDKIWTLIADVRNTGRFSPETFEAEWLDGATGPALGARFRGHVRRNGIGP--VYWT 72
+AA P ++W L++D+ + R SPE E EWLDGA GPA+GA F G R +G+G
Sbjct 15 IAADPQRVWELVSDIATSARHSPELQEVEWLDGADGPAVGACFAGRNRNSGLGEWRTVSR 74
Query 73 VCEPGREFGF---AVLLGDR----PVNNWHYRLTPTADGT 105
+ R F V DR P+ W Y L P ADG+
Sbjct 75 ITRMSRPHVFEWEVVHYNDRRHGEPLAVWTYTLEPLADGS 114
>gi|226360630|ref|YP_002778408.1| hypothetical protein ROP_12160 [Rhodococcus opacus B4]
gi|226239115|dbj|BAH49463.1| hypothetical protein [Rhodococcus opacus B4]
Length=426
Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/161 (34%), Positives = 78/161 (49%), Gaps = 22/161 (13%)
Query 8 EGSATVHMAAPPDKIWTLIADVRNTGRFSPETFEAEWLDGATGPALGARFRGHVRRNGIG 67
EG+A + + P +++ +ADV SPE EWL G +GARFRGH R + +
Sbjct 233 EGAAELWIDVPARQLYDAVADVTRISERSPECRRCEWLPGRPPGTVGARFRGHNRAHHM- 291
Query 68 PVYWT-VCE-----PGREFGFAVLLGDR-PV----NNWHYRLTPTADGTEVTESFR---L 113
W+ VCE PGR+F F + R P+ W Y T DGT VT S+R L
Sbjct 292 --RWSRVCEVTAVDPGRKFEFRTVSDRRNPLYHDSTTWSYLFTADGDGTRVTHSYRIDVL 349
Query 114 PPSVLTTVYYRVFGGWLRQRRNIR-DMTKTLQRIKDLVEAG 153
P L +Y R+ Q +++R M + L+ ++ AG
Sbjct 350 PYRPLLRLYSRLQP----QHQDMRPQMRQNLEALRQQAHAG 386
>gi|297197063|ref|ZP_06914460.1| cyclase/dehydrase [Streptomyces sviceus ATCC 29083]
gi|197714061|gb|EDY58095.1| cyclase/dehydrase [Streptomyces sviceus ATCC 29083]
Length=174
Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/152 (32%), Positives = 70/152 (47%), Gaps = 15/152 (9%)
Query 13 VHMAAPPDKIWTLIADVRNTGRFSPETFEAEWLDGATGPALGARFRGHVRRNGIGPVYWT 72
+ +AAPP+++W L++D+ R S E EWLDG P LGARF G + G W
Sbjct 18 IWIAAPPERVWALVSDIELMPRLSSELQSVEWLDGGKVPVLGARFVGRSKHEAFG--EWA 75
Query 73 VC------EPGREFGFAVLLGDRPVNNWHYRLTPTADGTEVTESFRLPP--SVLTTVYYR 124
EP R F +AV P W + L P GT + + ++ P S L+ R
Sbjct 76 TISHIVEYEPLRVFAWAVEDPQFPSAIWRFTLEPRDGGTLLRQWMQMGPGRSGLSVAIDR 135
Query 125 VFGG-----WLRQRRNIRDMTKTLQRIKDLVE 151
+ ++R R ++ TL+ IK L E
Sbjct 136 MPEKEQKIVFVRMREFESNIGTTLEAIKKLAE 167
>gi|300787963|ref|YP_003768254.1| hypothetical protein AMED_6114 [Amycolatopsis mediterranei U32]
gi|299797477|gb|ADJ47852.1| conserved hypothetical protein [Amycolatopsis mediterranei U32]
gi|340529538|gb|AEK44743.1| hypothetical protein RAM_31340 [Amycolatopsis mediterranei S699]
Length=167
Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/157 (34%), Positives = 76/157 (49%), Gaps = 22/157 (14%)
Query 13 VHMAAPPDKIWTLIADVRNTGRFSPETFEAEWLDGATGPALGARFRGHVRRNGIGPVYWT 72
V +AA P ++W+ + DV RFS E W++GA P LGARFRG + + + T
Sbjct 13 VRIAAGPAEVWSWLLDVDLPARFSTEFQGGGWVEGAE-PGLGARFRGR-NSHPVAGEWET 70
Query 73 VC-----EPGREFGFAVLLGDRPVNNWHYRLTPTADGTEVTESFRL--PPSVLTTVYYRV 125
V EPGR F +AV+ P +W + L P DGT + + ++ PS LTT +
Sbjct 71 VSTVTGYEPGRLFAWAVMDVTNPAASWRFELVPDGDGTILRQWAQIGPGPSNLTT----I 126
Query 126 FGGWLRQRRNI---------RDMTKTLQRIKDLVEAG 153
G I +M KT++ IK L E+G
Sbjct 127 IGSMPEHEEEIVAMRLGELQANMQKTVEGIKALAESG 163
>gi|254822379|ref|ZP_05227380.1| hypothetical protein MintA_20771 [Mycobacterium intracellulare
ATCC 13950]
Length=171
Score = 65.5 bits (158), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/154 (32%), Positives = 70/154 (46%), Gaps = 11/154 (7%)
Query 11 ATVHMAAPPDKIWTLIADVRNTGRFSPETFEAEWLDGATGPALGARFRGHVRRNGIGPVY 70
A+ + A P ++W L+ D+ S E EW +G+ GP +GARF G+ G
Sbjct 16 ASTWIDADPQRVWNLVCDIELMPAVSNELQAVEWAEGSDGPRVGARFVGYNEHEAFGQWS 75
Query 71 WT----VCEPGREFGFAVLLGDRPVNNWHYRLTPTADGTEVTESFRLPP--SVLTTVYYR 124
T C+ REF +AV D P + W +RL P GT + ++ P S L+T
Sbjct 76 TTSEIVACDEPREFAWAVGGPDNPASIWRFRLAPRDGGTALNYWMQMGPGRSGLSTAIDS 135
Query 125 VFGG-----WLRQRRNIRDMTKTLQRIKDLVEAG 153
+ ++R R + KTL IK L E G
Sbjct 136 MPDKEQKIVFVRMREFEAAIGKTLASIKRLAEHG 169
>gi|331699950|ref|YP_004336189.1| polyketide cyclase/dehydrase [Pseudonocardia dioxanivorans CB1190]
gi|326954639|gb|AEA28336.1| Polyketide cyclase/dehydrase [Pseudonocardia dioxanivorans CB1190]
Length=180
Score = 65.1 bits (157), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/107 (33%), Positives = 53/107 (50%), Gaps = 4/107 (3%)
Query 13 VHMAAPPDKIWTLIADVRNTGRFSPETFEAEWLDGATGPALGARFRGHVRRNGIGP---- 68
+ + A P+++W ++A V S E EW DGATGPA+GARF G+ + + +G
Sbjct 28 IWIDARPERVWEIVAAVEEMPSMSNELRAVEWCDGATGPAVGARFVGYSKHDALGEWSTT 87
Query 69 VYWTVCEPGREFGFAVLLGDRPVNNWHYRLTPTADGTEVTESFRLPP 115
Y C +AV D P W + L P GT +++ +L P
Sbjct 88 SYVVECTAPETLAWAVTDPDDPSARWRFTLRPEGAGTRLSQWVQLGP 134
>gi|145222660|ref|YP_001133338.1| hypothetical protein Mflv_2072 [Mycobacterium gilvum PYR-GCK]
gi|145215146|gb|ABP44550.1| conserved hypothetical protein [Mycobacterium gilvum PYR-GCK]
Length=154
Score = 64.3 bits (155), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/159 (34%), Positives = 77/159 (49%), Gaps = 20/159 (12%)
Query 7 MEGSATVHMAAPPDKIWTLIADVRNTGRFSPETFEAEWLDGATGPALGARFRGHVRRNGI 66
++ S ++ +A PP+K++ L++DV TG +SP +A W D GP +GA F G RN +
Sbjct 4 LKRSGSIAVAVPPEKLYALVSDVTRTGEWSP-VCKACWWDEGAGPRVGAWFTG---RNEL 59
Query 67 GPVYW------TVCEPGREFGFAVLLGDRPVNNWHYRLTPTADGTEVTESFRLPPSVLTT 120
W EPGREF + V G W Y L P DGT +TES+ P +
Sbjct 60 PERTWETRSQVVAAEPGREFAWEVNDG---WVRWGYTLEPDGDGTLLTESWEFLPKGIDG 116
Query 121 VYYRVFGG-----WLRQRRNIRD-MTKTLQRIKDLVEAG 153
R FG + + RD + TL I+ + EAG
Sbjct 117 FRER-FGSEADAEIVTRSDAARDGIPATLAAIRRIAEAG 154
>gi|126434681|ref|YP_001070372.1| hemerythrin HHE cation binding domain-containing protein [Mycobacterium
sp. JLS]
gi|126234481|gb|ABN97881.1| Hemerythrin HHE cation binding domain protein [Mycobacterium
sp. JLS]
Length=747
Score = 63.9 bits (154), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/114 (37%), Positives = 57/114 (50%), Gaps = 5/114 (4%)
Query 3 LDQVMEGSATVHMAAPPDKIWTLIADVRNTGRFSPETFEAEWLDGATGPALGARFRGHVR 62
L + G +V +AAP + +W +AD R+S E +LDG T LG RFRG R
Sbjct 569 LHRKFNGQISVEIAAPIEAVWKQVADPVRVPRWSHECRRVRFLDGTTSAGLGRRFRGTNR 628
Query 63 ----RNGIGPVYWTVCEPGREFGFAVLLGDRPVNNWHYRLTPTADGTEVTESFR 112
R +T EP EFG+ G WH+RL PTA GT +T++F+
Sbjct 629 SGRYRWSRNCTIFTYDEP-LEFGYVTSGGLGDATAWHFRLEPTATGTRLTQAFQ 681
>gi|111023681|ref|YP_706653.1| hypothetical protein RHA1_ro06723 [Rhodococcus jostii RHA1]
gi|110823211|gb|ABG98495.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length=397
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/161 (33%), Positives = 75/161 (47%), Gaps = 22/161 (13%)
Query 8 EGSATVHMAAPPDKIWTLIADVRNTGRFSPETFEAEWLDGATGPALGARFRGHVRRNGIG 67
+GSA + + P +++ +ADV SPE WL G +GARFRGH R + +
Sbjct 233 QGSAELWIDVPARQLYDAVADVTRISERSPECRGCAWLPGRPPGTVGARFRGHNRAHHM- 291
Query 68 PVYWT-VCE-----PGREFGFAVLLGDR-PV----NNWHYRLTPTADGTEVTESFR---L 113
W+ VCE PGR F F + R P+ W Y DGT VT S+R L
Sbjct 292 --RWSRVCEVTAADPGRTFAFHTVSDRRNPLYHDSTTWSYTFRADGDGTRVTHSYRIDVL 349
Query 114 PPSVLTTVYYRVFGGWLRQRRNIR-DMTKTLQRIKDLVEAG 153
P L +Y R+ Q R++R M + L+ ++ AG
Sbjct 350 PYRPLLPLYTRLQP----QHRDMRPQMRQNLEALRQQAHAG 386
>gi|118464976|ref|YP_882849.1| hypothetical protein MAV_3672 [Mycobacterium avium 104]
gi|118166263|gb|ABK67160.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=153
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/150 (37%), Positives = 69/150 (46%), Gaps = 11/150 (7%)
Query 10 SATVHMAAPPDKIWTLIADVRNTGRFSPETFEAEWLDG-ATGPALGARFRGHVRRNGIGP 68
SA+VH+ A P+ ++ LI D+ + E +W G A P GA F GH RNG G
Sbjct 7 SASVHIDARPEVVYRLITDLPTLASLAEEAVAMQWRKGDAARP--GAVFTGH-NRNG-GR 62
Query 69 VYWTVC-----EPGREFGFAVLLGDRPVNNWHYRLTPTADGTEVTES-FRLPPSVLTTVY 122
+ T C EPGR F F V PV W Y + T G +VTES + P V
Sbjct 63 RWSTKCTVTDAEPGRRFAFDVRHTVFPVARWQYDIVGTDGGCDVTESTWDRRPGWFAKVA 122
Query 123 YRVFGGWLRQRRNIRDMTKTLQRIKDLVEA 152
R G R N + TLQR+K EA
Sbjct 123 GRATGVTDRAGANAEHIRLTLQRLKQRAEA 152
>gi|134099544|ref|YP_001105205.1| cyclase/dehydrase [Saccharopolyspora erythraea NRRL 2338]
gi|291009272|ref|ZP_06567245.1| cyclase/dehydrase [Saccharopolyspora erythraea NRRL 2338]
gi|133912167|emb|CAM02280.1| cyclase/dehydrase [Saccharopolyspora erythraea NRRL 2338]
Length=172
Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/151 (31%), Positives = 70/151 (47%), Gaps = 16/151 (10%)
Query 15 MAAPPDKIWTLIADVRNTGRFSPETFEAEWLDGATGPALGARFRGHVRRNGIGPVYWTVC 74
+AAPP ++W ++DV S E W+ +T PALGARF G R +G W+
Sbjct 20 VAAPPSRVWEFVSDVERMPDLSDELQSVRWVAPSTCPALGARFVGSSRHESLG--EWSTS 77
Query 75 ------EPGREFGFAVLLGDR-PVNNWHYRLTPTADGTEVTESFRLPP--SVLTTVYYRV 125
+P R F + V D P W + + P GT + + R+ P S L+ R+
Sbjct 78 SRVVEFDPPRVFAWEVEGPDADPSATWRFTVEPDGGGTSLRQEVRMGPGRSGLSLAIERM 137
Query 126 FGG-----WLRQRRNIRDMTKTLQRIKDLVE 151
++R R +MT+TL +K+L E
Sbjct 138 PEKEQKIVFVRMREFEANMTRTLAAVKELAE 168
Lambda K H
0.323 0.139 0.454
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 127769454500
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40