BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv1887 Length=380 Score E Sequences producing significant alignments: (Bits) Value gi|15841357|ref|NP_336394.1| hypothetical protein MT1935 [Mycoba... 752 0.0 gi|15609024|ref|NP_216403.1| hypothetical protein Rv1887 [Mycoba... 751 0.0 gi|289447501|ref|ZP_06437245.1| conserved hypothetical protein [... 751 0.0 gi|121637791|ref|YP_978014.1| hypothetical protein BCG_1924 [Myc... 748 0.0 gi|254550899|ref|ZP_05141346.1| hypothetical protein Mtube_10641... 696 0.0 gi|339294822|gb|AEJ46933.1| hypothetical protein CCDC5079_1743 [... 693 0.0 gi|289569966|ref|ZP_06450193.1| hypothetical protein TBJG_00333 ... 529 4e-148 gi|183982785|ref|YP_001851076.1| hypothetical protein MMAR_2779 ... 422 3e-116 gi|118618367|ref|YP_906699.1| hypothetical protein MUL_2968 [Myc... 422 5e-116 gi|240170534|ref|ZP_04749193.1| hypothetical protein MkanA1_1457... 412 5e-113 gi|41407709|ref|NP_960545.1| hypothetical protein MAP1611 [Mycob... 375 6e-102 gi|342859536|ref|ZP_08716189.1| hypothetical protein MCOL_11673 ... 366 3e-99 gi|118464401|ref|YP_882001.1| hypothetical protein MAV_2814 [Myc... 360 1e-97 gi|254819292|ref|ZP_05224293.1| hypothetical protein MintA_05163... 352 7e-95 gi|296164908|ref|ZP_06847464.1| conserved hypothetical protein [... 346 5e-93 gi|336457548|gb|EGO36554.1| hypothetical protein MAPs_22200 [Myc... 317 3e-84 gi|254775294|ref|ZP_05216810.1| hypothetical protein MaviaA2_115... 311 2e-82 gi|120404001|ref|YP_953830.1| FHA domain-containing protein [Myc... 167 3e-39 gi|118473362|ref|YP_887834.1| hypothetical protein MSMEG_3531 [M... 154 3e-35 gi|333990614|ref|YP_004523228.1| hypothetical protein JDM601_197... 141 2e-31 gi|145223887|ref|YP_001134565.1| hypothetical protein Mflv_3300 ... 139 9e-31 gi|108797411|ref|YP_637608.1| hypothetical protein Mmcs_0431 [My... 118 1e-24 gi|126433030|ref|YP_001068721.1| hypothetical protein Mjls_0418 ... 114 2e-23 gi|118472489|ref|YP_885087.1| hypothetical protein MSMEG_0679 [M... 102 9e-20 gi|254821494|ref|ZP_05226495.1| hypothetical protein MintA_16290... 102 9e-20 gi|315442150|ref|YP_004075029.1| hypothetical protein Mspyr1_048... 99.4 9e-19 gi|145220894|ref|YP_001131572.1| hypothetical protein Mflv_0290 ... 99.4 1e-18 gi|296167772|ref|ZP_06849967.1| conserved hypothetical protein [... 95.1 2e-17 gi|120401606|ref|YP_951435.1| hypothetical protein Mvan_0590 [My... 90.5 5e-16 gi|342859179|ref|ZP_08715833.1| hypothetical protein MCOL_09883 ... 89.7 7e-16 gi|296167779|ref|ZP_06849968.1| conserved hypothetical protein [... 89.4 1e-15 gi|145225815|ref|YP_001136493.1| hypothetical protein Mflv_5241 ... 89.0 1e-15 gi|333988963|ref|YP_004521577.1| hypothetical protein JDM601_032... 89.0 1e-15 gi|118462913|ref|YP_883951.1| hypothetical protein MAV_4826 [Myc... 88.6 2e-15 gi|41409920|ref|NP_962756.1| hypothetical protein MAP3822 [Mycob... 88.6 2e-15 gi|183980627|ref|YP_001848918.1| hypothetical protein MMAR_0601 ... 88.2 2e-15 gi|296169282|ref|ZP_06850925.1| conserved hypothetical protein [... 87.8 3e-15 gi|336460291|gb|EGO39193.1| hypothetical protein MAPs_42380 [Myc... 87.8 3e-15 gi|315442477|ref|YP_004075356.1| hypothetical protein Mspyr1_082... 86.7 6e-15 gi|169631374|ref|YP_001705023.1| hypothetical protein MAB_4296c ... 86.3 8e-15 gi|118462981|ref|YP_883972.1| hypothetical protein MAV_4848 [Myc... 85.9 9e-15 gi|41409899|ref|NP_962735.1| hypothetical protein MAP3801 [Mycob... 85.5 1e-14 gi|333988964|ref|YP_004521578.1| hypothetical protein JDM601_032... 85.5 1e-14 gi|336460239|gb|EGO39142.1| hypothetical protein MAPs_42670 [Myc... 85.5 1e-14 gi|254777286|ref|ZP_05218802.1| hypothetical protein MaviaA2_218... 84.7 2e-14 gi|183980628|ref|YP_001848919.1| hypothetical protein MMAR_0602 ... 83.2 7e-14 gi|118462565|ref|YP_883949.1| hypothetical protein MAV_4824 [Myc... 81.6 2e-13 gi|41409922|ref|NP_962758.1| hypothetical protein MAP3824 [Mycob... 81.3 3e-13 gi|240172284|ref|ZP_04750943.1| hypothetical protein MkanA1_2341... 79.0 1e-12 gi|41409919|ref|NP_962755.1| hypothetical protein MAP3821 [Mycob... 76.6 6e-12 >gi|15841357|ref|NP_336394.1| hypothetical protein MT1935 [Mycobacterium tuberculosis CDC1551] gi|13881591|gb|AAK46208.1| hypothetical protein MT1935 [Mycobacterium tuberculosis CDC1551] Length=385 Score = 752 bits (1941), Expect = 0.0, Method: Compositional matrix adjust. Identities = 380/380 (100%), Positives = 380/380 (100%), Gaps = 0/380 (0%) Query 1 LDTVLGLSITPTTLGWVLAEGHGADGAILDRNELELHSGRNAQAIHTAEQLAAEVLLAHE 60 LDTVLGLSITPTTLGWVLAEGHGADGAILDRNELELHSGRNAQAIHTAEQLAAEVLLAHE Sbjct 6 LDTVLGLSITPTTLGWVLAEGHGADGAILDRNELELHSGRNAQAIHTAEQLAAEVLLAHE 65 Query 61 VAAAGDHRLRVIGVTWNAEASAQAALLVESLTGAGFDNVVPVRRLRAIETLAQAIAPVIG 120 VAAAGDHRLRVIGVTWNAEASAQAALLVESLTGAGFDNVVPVRRLRAIETLAQAIAPVIG Sbjct 66 VAAAGDHRLRVIGVTWNAEASAQAALLVESLTGAGFDNVVPVRRLRAIETLAQAIAPVIG 125 Query 121 YEQIAVCVLEHESATVVMVDTHDGKTQIAVKHVCRGLSGLTSWLTGMFGRDAWRPAGVVV 180 YEQIAVCVLEHESATVVMVDTHDGKTQIAVKHVCRGLSGLTSWLTGMFGRDAWRPAGVVV Sbjct 126 YEQIAVCVLEHESATVVMVDTHDGKTQIAVKHVCRGLSGLTSWLTGMFGRDAWRPAGVVV 185 Query 181 VGSDSEVSEFSWQLERVLPVPVFAQTMAQVTVARGAALAAAQSTEFTDAQLVADSVSQPT 240 VGSDSEVSEFSWQLERVLPVPVFAQTMAQVTVARGAALAAAQSTEFTDAQLVADSVSQPT Sbjct 186 VGSDSEVSEFSWQLERVLPVPVFAQTMAQVTVARGAALAAAQSTEFTDAQLVADSVSQPT 245 Query 241 VAPRRSRHYAGAAAALAAAAVTFVASLSLAVGIQLAPHNDTGTAKHGAHKPTPRIAKAVA 300 VAPRRSRHYAGAAAALAAAAVTFVASLSLAVGIQLAPHNDTGTAKHGAHKPTPRIAKAVA Sbjct 246 VAPRRSRHYAGAAAALAAAAVTFVASLSLAVGIQLAPHNDTGTAKHGAHKPTPRIAKAVA 305 Query 301 PAVPPPPTVTPPVPARAPRPAAQHEPPARVTSGEALTEPNPPEEQPNASAPQQDRNDSQP 360 PAVPPPPTVTPPVPARAPRPAAQHEPPARVTSGEALTEPNPPEEQPNASAPQQDRNDSQP Sbjct 306 PAVPPPPTVTPPVPARAPRPAAQHEPPARVTSGEALTEPNPPEEQPNASAPQQDRNDSQP 365 Query 361 ITRVLEHIPGAYGDSAPPAE 380 ITRVLEHIPGAYGDSAPPAE Sbjct 366 ITRVLEHIPGAYGDSAPPAE 385 >gi|15609024|ref|NP_216403.1| hypothetical protein Rv1887 [Mycobacterium tuberculosis H37Rv] gi|31793078|ref|NP_855571.1| hypothetical protein Mb1919 [Mycobacterium bovis AF2122/97] gi|148661693|ref|YP_001283216.1| hypothetical protein MRA_1898 [Mycobacterium tuberculosis H37Ra] 62 more sequence titles Length=380 Score = 751 bits (1940), Expect = 0.0, Method: Compositional matrix adjust. Identities = 379/380 (99%), Positives = 380/380 (100%), Gaps = 0/380 (0%) Query 1 LDTVLGLSITPTTLGWVLAEGHGADGAILDRNELELHSGRNAQAIHTAEQLAAEVLLAHE 60 +DTVLGLSITPTTLGWVLAEGHGADGAILDRNELELHSGRNAQAIHTAEQLAAEVLLAHE Sbjct 1 MDTVLGLSITPTTLGWVLAEGHGADGAILDRNELELHSGRNAQAIHTAEQLAAEVLLAHE 60 Query 61 VAAAGDHRLRVIGVTWNAEASAQAALLVESLTGAGFDNVVPVRRLRAIETLAQAIAPVIG 120 VAAAGDHRLRVIGVTWNAEASAQAALLVESLTGAGFDNVVPVRRLRAIETLAQAIAPVIG Sbjct 61 VAAAGDHRLRVIGVTWNAEASAQAALLVESLTGAGFDNVVPVRRLRAIETLAQAIAPVIG 120 Query 121 YEQIAVCVLEHESATVVMVDTHDGKTQIAVKHVCRGLSGLTSWLTGMFGRDAWRPAGVVV 180 YEQIAVCVLEHESATVVMVDTHDGKTQIAVKHVCRGLSGLTSWLTGMFGRDAWRPAGVVV Sbjct 121 YEQIAVCVLEHESATVVMVDTHDGKTQIAVKHVCRGLSGLTSWLTGMFGRDAWRPAGVVV 180 Query 181 VGSDSEVSEFSWQLERVLPVPVFAQTMAQVTVARGAALAAAQSTEFTDAQLVADSVSQPT 240 VGSDSEVSEFSWQLERVLPVPVFAQTMAQVTVARGAALAAAQSTEFTDAQLVADSVSQPT Sbjct 181 VGSDSEVSEFSWQLERVLPVPVFAQTMAQVTVARGAALAAAQSTEFTDAQLVADSVSQPT 240 Query 241 VAPRRSRHYAGAAAALAAAAVTFVASLSLAVGIQLAPHNDTGTAKHGAHKPTPRIAKAVA 300 VAPRRSRHYAGAAAALAAAAVTFVASLSLAVGIQLAPHNDTGTAKHGAHKPTPRIAKAVA Sbjct 241 VAPRRSRHYAGAAAALAAAAVTFVASLSLAVGIQLAPHNDTGTAKHGAHKPTPRIAKAVA 300 Query 301 PAVPPPPTVTPPVPARAPRPAAQHEPPARVTSGEALTEPNPPEEQPNASAPQQDRNDSQP 360 PAVPPPPTVTPPVPARAPRPAAQHEPPARVTSGEALTEPNPPEEQPNASAPQQDRNDSQP Sbjct 301 PAVPPPPTVTPPVPARAPRPAAQHEPPARVTSGEALTEPNPPEEQPNASAPQQDRNDSQP 360 Query 361 ITRVLEHIPGAYGDSAPPAE 380 ITRVLEHIPGAYGDSAPPAE Sbjct 361 ITRVLEHIPGAYGDSAPPAE 380 >gi|289447501|ref|ZP_06437245.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A] gi|289420459|gb|EFD17660.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A] Length=380 Score = 751 bits (1938), Expect = 0.0, Method: Compositional matrix adjust. Identities = 378/380 (99%), Positives = 379/380 (99%), Gaps = 0/380 (0%) Query 1 LDTVLGLSITPTTLGWVLAEGHGADGAILDRNELELHSGRNAQAIHTAEQLAAEVLLAHE 60 +DTVLGLSITPTTLGWVLAEGHGADGAILDRNELELHSGRNAQAIHTAEQLAAEVLLAHE Sbjct 1 MDTVLGLSITPTTLGWVLAEGHGADGAILDRNELELHSGRNAQAIHTAEQLAAEVLLAHE 60 Query 61 VAAAGDHRLRVIGVTWNAEASAQAALLVESLTGAGFDNVVPVRRLRAIETLAQAIAPVIG 120 VAAAGDHRLRVIGVTWNAEASAQAALLVESLTGAGFDNVVPVRRLRAIETLAQAIAPVIG Sbjct 61 VAAAGDHRLRVIGVTWNAEASAQAALLVESLTGAGFDNVVPVRRLRAIETLAQAIAPVIG 120 Query 121 YEQIAVCVLEHESATVVMVDTHDGKTQIAVKHVCRGLSGLTSWLTGMFGRDAWRPAGVVV 180 YEQIAVCV EHESATVVMVDTHDGKTQIAVKHVCRGLSGLTSWLTGMFGRDAWRPAGVVV Sbjct 121 YEQIAVCVFEHESATVVMVDTHDGKTQIAVKHVCRGLSGLTSWLTGMFGRDAWRPAGVVV 180 Query 181 VGSDSEVSEFSWQLERVLPVPVFAQTMAQVTVARGAALAAAQSTEFTDAQLVADSVSQPT 240 VGSDSEVSEFSWQLERVLPVPVFAQTMAQVTVARGAALAAAQSTEFTDAQLVADSVSQPT Sbjct 181 VGSDSEVSEFSWQLERVLPVPVFAQTMAQVTVARGAALAAAQSTEFTDAQLVADSVSQPT 240 Query 241 VAPRRSRHYAGAAAALAAAAVTFVASLSLAVGIQLAPHNDTGTAKHGAHKPTPRIAKAVA 300 VAPRRSRHYAGAAAALAAAAVTFVASLSLAVGIQLAPHNDTGTAKHGAHKPTPRIAKAVA Sbjct 241 VAPRRSRHYAGAAAALAAAAVTFVASLSLAVGIQLAPHNDTGTAKHGAHKPTPRIAKAVA 300 Query 301 PAVPPPPTVTPPVPARAPRPAAQHEPPARVTSGEALTEPNPPEEQPNASAPQQDRNDSQP 360 PAVPPPPTVTPPVPARAPRPAAQHEPPARVTSGEALTEPNPPEEQPNASAPQQDRNDSQP Sbjct 301 PAVPPPPTVTPPVPARAPRPAAQHEPPARVTSGEALTEPNPPEEQPNASAPQQDRNDSQP 360 Query 361 ITRVLEHIPGAYGDSAPPAE 380 ITRVLEHIPGAYGDSAPPAE Sbjct 361 ITRVLEHIPGAYGDSAPPAE 380 >gi|121637791|ref|YP_978014.1| hypothetical protein BCG_1924 [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224990275|ref|YP_002644962.1| hypothetical protein JTY_1908 [Mycobacterium bovis BCG str. Tokyo 172] gi|121493438|emb|CAL71911.1| Hypothetical protein BCG_1924 [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224773388|dbj|BAH26194.1| hypothetical protein JTY_1908 [Mycobacterium bovis BCG str. Tokyo 172] gi|341601818|emb|CCC64492.1| hypothetical protein BCGM_1899 [Mycobacterium bovis BCG str. Moreau RDJ] Length=380 Score = 748 bits (1931), Expect = 0.0, Method: Compositional matrix adjust. Identities = 378/380 (99%), Positives = 379/380 (99%), Gaps = 0/380 (0%) Query 1 LDTVLGLSITPTTLGWVLAEGHGADGAILDRNELELHSGRNAQAIHTAEQLAAEVLLAHE 60 +DTVLGLSITPTTLGWVLAEGHGADGAILDRNELELHSGRNAQAIHTAEQLAAEVLLAHE Sbjct 1 MDTVLGLSITPTTLGWVLAEGHGADGAILDRNELELHSGRNAQAIHTAEQLAAEVLLAHE 60 Query 61 VAAAGDHRLRVIGVTWNAEASAQAALLVESLTGAGFDNVVPVRRLRAIETLAQAIAPVIG 120 VAAAGDHRLRVIGVTWNAEASAQAALLVESLTGAGFDNVVPVRRLRAIETLAQAIAPVIG Sbjct 61 VAAAGDHRLRVIGVTWNAEASAQAALLVESLTGAGFDNVVPVRRLRAIETLAQAIAPVIG 120 Query 121 YEQIAVCVLEHESATVVMVDTHDGKTQIAVKHVCRGLSGLTSWLTGMFGRDAWRPAGVVV 180 EQIAVCVLEHESATVVMVDTHDGKTQIAVKHVCRGLSGLTSWLTGMFGRDAWRPAGVVV Sbjct 121 CEQIAVCVLEHESATVVMVDTHDGKTQIAVKHVCRGLSGLTSWLTGMFGRDAWRPAGVVV 180 Query 181 VGSDSEVSEFSWQLERVLPVPVFAQTMAQVTVARGAALAAAQSTEFTDAQLVADSVSQPT 240 VGSDSEVSEFSWQLERVLPVPVFAQTMAQVTVARGAALAAAQSTEFTDAQLVADSVSQPT Sbjct 181 VGSDSEVSEFSWQLERVLPVPVFAQTMAQVTVARGAALAAAQSTEFTDAQLVADSVSQPT 240 Query 241 VAPRRSRHYAGAAAALAAAAVTFVASLSLAVGIQLAPHNDTGTAKHGAHKPTPRIAKAVA 300 VAPRRSRHYAGAAAALAAAAVTFVASLSLAVGIQLAPHNDTGTAKHGAHKPTPRIAKAVA Sbjct 241 VAPRRSRHYAGAAAALAAAAVTFVASLSLAVGIQLAPHNDTGTAKHGAHKPTPRIAKAVA 300 Query 301 PAVPPPPTVTPPVPARAPRPAAQHEPPARVTSGEALTEPNPPEEQPNASAPQQDRNDSQP 360 PAVPPPPTVTPPVPARAPRPAAQHEPPARVTSGEALTEPNPPEEQPNASAPQQDRNDSQP Sbjct 301 PAVPPPPTVTPPVPARAPRPAAQHEPPARVTSGEALTEPNPPEEQPNASAPQQDRNDSQP 360 Query 361 ITRVLEHIPGAYGDSAPPAE 380 ITRVLEHIPGAYGDSAPPAE Sbjct 361 ITRVLEHIPGAYGDSAPPAE 380 >gi|254550899|ref|ZP_05141346.1| hypothetical protein Mtube_10641 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|294996795|ref|ZP_06802486.1| hypothetical protein Mtub2_20403 [Mycobacterium tuberculosis 210] gi|297634449|ref|ZP_06952229.1| hypothetical protein MtubK4_10021 [Mycobacterium tuberculosis KZN 4207] gi|297731436|ref|ZP_06960554.1| hypothetical protein MtubKR_10121 [Mycobacterium tuberculosis KZN R506] gi|313658770|ref|ZP_07815650.1| hypothetical protein MtubKV_10136 [Mycobacterium tuberculosis KZN V2475] gi|339298449|gb|AEJ50559.1| hypothetical protein CCDC5180_1722 [Mycobacterium tuberculosis CCDC5180] Length=352 Score = 696 bits (1796), Expect = 0.0, Method: Compositional matrix adjust. Identities = 351/352 (99%), Positives = 352/352 (100%), Gaps = 0/352 (0%) Query 29 LDRNELELHSGRNAQAIHTAEQLAAEVLLAHEVAAAGDHRLRVIGVTWNAEASAQAALLV 88 +DRNELELHSGRNAQAIHTAEQLAAEVLLAHEVAAAGDHRLRVIGVTWNAEASAQAALLV Sbjct 1 MDRNELELHSGRNAQAIHTAEQLAAEVLLAHEVAAAGDHRLRVIGVTWNAEASAQAALLV 60 Query 89 ESLTGAGFDNVVPVRRLRAIETLAQAIAPVIGYEQIAVCVLEHESATVVMVDTHDGKTQI 148 ESLTGAGFDNVVPVRRLRAIETLAQAIAPVIGYEQIAVCVLEHESATVVMVDTHDGKTQI Sbjct 61 ESLTGAGFDNVVPVRRLRAIETLAQAIAPVIGYEQIAVCVLEHESATVVMVDTHDGKTQI 120 Query 149 AVKHVCRGLSGLTSWLTGMFGRDAWRPAGVVVVGSDSEVSEFSWQLERVLPVPVFAQTMA 208 AVKHVCRGLSGLTSWLTGMFGRDAWRPAGVVVVGSDSEVSEFSWQLERVLPVPVFAQTMA Sbjct 121 AVKHVCRGLSGLTSWLTGMFGRDAWRPAGVVVVGSDSEVSEFSWQLERVLPVPVFAQTMA 180 Query 209 QVTVARGAALAAAQSTEFTDAQLVADSVSQPTVAPRRSRHYAGAAAALAAAAVTFVASLS 268 QVTVARGAALAAAQSTEFTDAQLVADSVSQPTVAPRRSRHYAGAAAALAAAAVTFVASLS Sbjct 181 QVTVARGAALAAAQSTEFTDAQLVADSVSQPTVAPRRSRHYAGAAAALAAAAVTFVASLS 240 Query 269 LAVGIQLAPHNDTGTAKHGAHKPTPRIAKAVAPAVPPPPTVTPPVPARAPRPAAQHEPPA 328 LAVGIQLAPHNDTGTAKHGAHKPTPRIAKAVAPAVPPPPTVTPPVPARAPRPAAQHEPPA Sbjct 241 LAVGIQLAPHNDTGTAKHGAHKPTPRIAKAVAPAVPPPPTVTPPVPARAPRPAAQHEPPA 300 Query 329 RVTSGEALTEPNPPEEQPNASAPQQDRNDSQPITRVLEHIPGAYGDSAPPAE 380 RVTSGEALTEPNPPEEQPNASAPQQDRNDSQPITRVLEHIPGAYGDSAPPAE Sbjct 301 RVTSGEALTEPNPPEEQPNASAPQQDRNDSQPITRVLEHIPGAYGDSAPPAE 352 >gi|339294822|gb|AEJ46933.1| hypothetical protein CCDC5079_1743 [Mycobacterium tuberculosis CCDC5079] Length=352 Score = 693 bits (1789), Expect = 0.0, Method: Compositional matrix adjust. Identities = 350/352 (99%), Positives = 351/352 (99%), Gaps = 0/352 (0%) Query 29 LDRNELELHSGRNAQAIHTAEQLAAEVLLAHEVAAAGDHRLRVIGVTWNAEASAQAALLV 88 +DRNELELHSGRNAQAIHTAEQLAAEVLLAHEVAAAGDHRLRVIGVTWNAEASAQAALLV Sbjct 1 MDRNELELHSGRNAQAIHTAEQLAAEVLLAHEVAAAGDHRLRVIGVTWNAEASAQAALLV 60 Query 89 ESLTGAGFDNVVPVRRLRAIETLAQAIAPVIGYEQIAVCVLEHESATVVMVDTHDGKTQI 148 ESLTGAGFDNVVPVRRLRAIETLAQAIAPVIGYEQIAVCVLEHESATVVMVDTHDGKTQI Sbjct 61 ESLTGAGFDNVVPVRRLRAIETLAQAIAPVIGYEQIAVCVLEHESATVVMVDTHDGKTQI 120 Query 149 AVKHVCRGLSGLTSWLTGMFGRDAWRPAGVVVVGSDSEVSEFSWQLERVLPVPVFAQTMA 208 AVKHVCRGLSGLTSWLTGMFGRDAWRPAGVVVVGSDSEVSEFSWQLERVLPVPVFAQTMA Sbjct 121 AVKHVCRGLSGLTSWLTGMFGRDAWRPAGVVVVGSDSEVSEFSWQLERVLPVPVFAQTMA 180 Query 209 QVTVARGAALAAAQSTEFTDAQLVADSVSQPTVAPRRSRHYAGAAAALAAAAVTFVASLS 268 QVTVARGAALAAAQSTEFTDAQLVADSVSQPTVAPRRSRHYAGAAAALAAAAVT VASLS Sbjct 181 QVTVARGAALAAAQSTEFTDAQLVADSVSQPTVAPRRSRHYAGAAAALAAAAVTLVASLS 240 Query 269 LAVGIQLAPHNDTGTAKHGAHKPTPRIAKAVAPAVPPPPTVTPPVPARAPRPAAQHEPPA 328 LAVGIQLAPHNDTGTAKHGAHKPTPRIAKAVAPAVPPPPTVTPPVPARAPRPAAQHEPPA Sbjct 241 LAVGIQLAPHNDTGTAKHGAHKPTPRIAKAVAPAVPPPPTVTPPVPARAPRPAAQHEPPA 300 Query 329 RVTSGEALTEPNPPEEQPNASAPQQDRNDSQPITRVLEHIPGAYGDSAPPAE 380 RVTSGEALTEPNPPEEQPNASAPQQDRNDSQPITRVLEHIPGAYGDSAPPAE Sbjct 301 RVTSGEALTEPNPPEEQPNASAPQQDRNDSQPITRVLEHIPGAYGDSAPPAE 352 >gi|289569966|ref|ZP_06450193.1| hypothetical protein TBJG_00333 [Mycobacterium tuberculosis T17] gi|289543720|gb|EFD47368.1| hypothetical protein TBJG_00333 [Mycobacterium tuberculosis T17] Length=293 Score = 529 bits (1362), Expect = 4e-148, Method: Compositional matrix adjust. Identities = 267/271 (99%), Positives = 270/271 (99%), Gaps = 0/271 (0%) Query 1 LDTVLGLSITPTTLGWVLAEGHGADGAILDRNELELHSGRNAQAIHTAEQLAAEVLLAHE 60 LDTVLGLSITPTTLGWVLAEGHGADGAILDRNELELHSGRNAQAIHTAEQLAAEVLLAHE Sbjct 6 LDTVLGLSITPTTLGWVLAEGHGADGAILDRNELELHSGRNAQAIHTAEQLAAEVLLAHE 65 Query 61 VAAAGDHRLRVIGVTWNAEASAQAALLVESLTGAGFDNVVPVRRLRAIETLAQAIAPVIG 120 VAAAGDHRLRVIGVTWNAEASAQAALLVESLTGAGFDNVVPVRRLRAIETLAQAIAPVIG Sbjct 66 VAAAGDHRLRVIGVTWNAEASAQAALLVESLTGAGFDNVVPVRRLRAIETLAQAIAPVIG 125 Query 121 YEQIAVCVLEHESATVVMVDTHDGKTQIAVKHVCRGLSGLTSWLTGMFGRDAWRPAGVVV 180 YEQIAVCVLEHESATVVMVDTHDGKTQIAVKHVCRGLSGLTSWLTGMFGRDAWRPAGVVV Sbjct 126 YEQIAVCVLEHESATVVMVDTHDGKTQIAVKHVCRGLSGLTSWLTGMFGRDAWRPAGVVV 185 Query 181 VGSDSEVSEFSWQLERVLPVPVFAQTMAQVTVARGAALAAAQSTEFTDAQLVADSVSQPT 240 VGSDSEVSEFSWQLERVLPVPVFAQTMAQVTVARGAALAAAQSTEFTDAQLVADSVSQPT Sbjct 186 VGSDSEVSEFSWQLERVLPVPVFAQTMAQVTVARGAALAAAQSTEFTDAQLVADSVSQPT 245 Query 241 VAPRRSRHYAGAAAALAAAAVTFVASLSLAV 271 VAPRRSRHYAGAAAALAAAAVT VASL+L++ Sbjct 246 VAPRRSRHYAGAAAALAAAAVTSVASLTLSM 276 >gi|183982785|ref|YP_001851076.1| hypothetical protein MMAR_2779 [Mycobacterium marinum M] gi|183176111|gb|ACC41221.1| conserved hypothetical protein [Mycobacterium marinum M] Length=380 Score = 422 bits (1086), Expect = 3e-116, Method: Compositional matrix adjust. Identities = 257/382 (68%), Positives = 295/382 (78%), Gaps = 7/382 (1%) Query 1 LDTVLGLSITPTTLGWVLAEGHGADGAILDRNELELHSGRNAQAIHTAEQLAAEVLLAHE 60 +DTVLGLS+TPTT+GWVLAEGHGADGAILD +E +LH R + +HTAEQ+A EV A E Sbjct 1 MDTVLGLSVTPTTVGWVLAEGHGADGAILDHHESQLHGSRGMRIVHTAEQVADEVWHAKE 60 Query 61 VAAAGDHRLRVIGVTWNAEASAQAALLVESLTGAGFDNVVPVRRLRAIETLAQAIAPVIG 120 VA+ HRLR+IGVTW EASAQAALL+E+LT AGFDNVVPVR L A+ETLA+AIAPVIG Sbjct 61 VASGAGHRLRMIGVTWGDEASAQAALLLEALTDAGFDNVVPVRLLDAVETLAEAIAPVIG 120 Query 121 YEQIAVCVLEHESATVVMVDTHDGKTQIAVKHVCRGLSGLTSWLTGMFGRDAWRPAGVVV 180 Y+Q AVC+LEH+ ATVVMVDT DGKTQ AVKHV G GL SWLTGMF R AWRPA VVV Sbjct 121 YDQTAVCILEHDWATVVMVDTQDGKTQTAVKHVRGGFDGLNSWLTGMFDRGAWRPAAVVV 180 Query 181 VGSDSEVSEFSWQLERVLPVPVFAQTMAQVTVARGAALAAAQSTEFTDAQLVADSVSQPT 240 VGSD++V EFSWQLE+ LPVPVFAQTMAQVT+ARGAALAAAQST+FTDA+L+AD VS+P Sbjct 181 VGSDTDVEEFSWQLEKALPVPVFAQTMAQVTIARGAALAAAQSTDFTDARLIAD-VSEPA 239 Query 241 VAPRRSRHYAGAAAALAAAAVTFVASLSLAVGIQLAPHNDTGTAKHGAHKPTPRIAKAVA 300 AP+RS HYAGAA LAAAAVTFV SLSLA+G+QL P H HKPTP I +AVA Sbjct 240 PAPKRSLHYAGAATTLAAAAVTFVGSLSLAIGLQLTPERHHTATGHAGHKPTPEIVEAVA 299 Query 301 PAVPPPPTVTPPVPARAPRPAAQHEPPARVTSGEALTEPNPPEEQPNASAPQQDRNDSQP 360 P VP P P P +AP P A E P R+T+GE +T+ P EQP APQ + D P Sbjct 300 PVVPMPAQPEPSAPHQAPAPGAGQE-PIRLTAGEQITD-AAPVEQPGGEAPQSEPADGSP 357 Query 361 -ITRVLEHIPGAYGD---SAPP 378 +TRVL HIPG+YG+ S PP Sbjct 358 MLTRVLTHIPGSYGEEEGSRPP 379 >gi|118618367|ref|YP_906699.1| hypothetical protein MUL_2968 [Mycobacterium ulcerans Agy99] gi|118570477|gb|ABL05228.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99] Length=385 Score = 422 bits (1085), Expect = 5e-116, Method: Compositional matrix adjust. Identities = 257/382 (68%), Positives = 296/382 (78%), Gaps = 7/382 (1%) Query 1 LDTVLGLSITPTTLGWVLAEGHGADGAILDRNELELHSGRNAQAIHTAEQLAAEVLLAHE 60 LDTVLGLS+TPTT+GWVLAEGHGADGAILD +E +LH R + +HTAEQ+A EV A E Sbjct 6 LDTVLGLSVTPTTVGWVLAEGHGADGAILDHHESQLHGSRGMRIVHTAEQVADEVWHAKE 65 Query 61 VAAAGDHRLRVIGVTWNAEASAQAALLVESLTGAGFDNVVPVRRLRAIETLAQAIAPVIG 120 VA+ HRLR+IGVTW+ EASAQAALL+E+LT AGFDNVVPVR + A+ETLA+AIAPVIG Sbjct 66 VASGAGHRLRMIGVTWSDEASAQAALLLEALTDAGFDNVVPVRLVDAVETLAEAIAPVIG 125 Query 121 YEQIAVCVLEHESATVVMVDTHDGKTQIAVKHVCRGLSGLTSWLTGMFGRDAWRPAGVVV 180 Y+Q AVC+LEH+ ATVVMVDT DGKTQ AVKHV G GL SWLTGMF R AWRPA VVV Sbjct 126 YDQTAVCILEHDWATVVMVDTQDGKTQTAVKHVRGGFDGLNSWLTGMFDRGAWRPAAVVV 185 Query 181 VGSDSEVSEFSWQLERVLPVPVFAQTMAQVTVARGAALAAAQSTEFTDAQLVADSVSQPT 240 VGSD++V EFSWQLE+ LPVPVFAQTMAQVT+ARGAALAAAQST+FTDA+L+AD VS+P Sbjct 186 VGSDTDVEEFSWQLEKALPVPVFAQTMAQVTIARGAALAAAQSTDFTDARLIAD-VSEPA 244 Query 241 VAPRRSRHYAGAAAALAAAAVTFVASLSLAVGIQLAPHNDTGTAKHGAHKPTPRIAKAVA 300 AP+RS HYAGAA LAAAAVTFV SLSLA+G+QL P H HKPTP I +AVA Sbjct 245 PAPKRSLHYAGAATTLAAAAVTFVGSLSLAIGLQLTPERHHTATGHAGHKPTPEIVEAVA 304 Query 301 PAVPPPPTVTPPVPARAPRPAAQHEPPARVTSGEALTEPNPPEEQPNASAPQQDRNDSQP 360 P VP P P P +AP P A E P R+T+GE +T+ P EQP APQ + D P Sbjct 305 PVVPMPAQPEPSAPHQAPAPGAGQE-PIRLTAGEQITD-AAPVEQPGGEAPQSEPADGSP 362 Query 361 -ITRVLEHIPGAYGD---SAPP 378 +TRVL HIPG+YG+ S PP Sbjct 363 MLTRVLTHIPGSYGEEEGSRPP 384 >gi|240170534|ref|ZP_04749193.1| hypothetical protein MkanA1_14570 [Mycobacterium kansasii ATCC 12478] Length=368 Score = 412 bits (1059), Expect = 5e-113, Method: Compositional matrix adjust. Identities = 243/373 (66%), Positives = 279/373 (75%), Gaps = 9/373 (2%) Query 9 ITPTTLGWVLAEGHGADGAILDRNELELHSGRNAQAIHTAEQLAAEVLLAHEVAAAGDHR 68 +TPT +GWVLAEGHGA+G IL NE+ L GR +H AEQ AAEV+ A E+AAA HR Sbjct 1 MTPTAVGWVLAEGHGAEGTILHHNEMRLRGGRGVGVVHAAEQAAAEVIRAGELAAAAGHR 60 Query 69 LRVIGVTWNAEASAQAALLVESLTGAGFDNVVPVRRLRAIETLAQAIAPVIGYEQIAVCV 128 LRV+GVTWN EASAQAALLVE+LT AGFDNVVPVR L A+ETLA+A+APVIGYEQ AVC+ Sbjct 61 LRVVGVTWNDEASAQAALLVEALTDAGFDNVVPVRLLDAVETLAEAVAPVIGYEQTAVCI 120 Query 129 LEHESATVVMVDTHDGKTQIAVKHVCRGLSGLTSWLTGMFGRDAWRPAGVVVVGSDSEVS 188 LE E ATVVMVDT DGKTQ AVK+V G GLTSWLTGMF R AWRPA VVVVGSD ++S Sbjct 121 LEREWATVVMVDTRDGKTQTAVKYVRGGYDGLTSWLTGMFDRSAWRPAAVVVVGSDLDIS 180 Query 189 EFSWQLERVLPVPVFAQTMAQVTVARGAALAAAQSTEFTDAQLVADSVSQPTVAPRRSRH 248 +FSWQLE LPVPVFAQTMAQVT+ARG A AAA++TEFTD +LVAD+ + T P+RSR Sbjct 181 DFSWQLETALPVPVFAQTMAQVTIARGTAQAAARTTEFTDERLVADT-GETTAVPKRSRQ 239 Query 249 YAGAAAALAAAAVTFVASLSLAVGIQLAPHNDTGTAKHGAHKPTPRIAKAVAPAVPPPPT 308 YAGAA LAAAAVTFVAS+SLAVG+QL P + TA+ TP IA+AVA A P P + Sbjct 240 YAGAATTLAAAAVTFVASVSLAVGLQLTPDRHSETAQRSIPTSTPEIAEAVATAAPVPAS 299 Query 309 VTPPVPARAPRPAAQHEPPARVTSGEALTEPNPPEEQPNASAPQQDRNDSQP-ITRVLEH 367 P P P PA Q E P ++TSGE LT + EQPN A Q ND P +TRVL+H Sbjct 300 AQLPAP--LPGPATQRE-PIQLTSGEELT--DAISEQPNDVASQPSPNDGSPLLTRVLKH 354 Query 368 IPGAYGDSA--PP 378 IPG YGD+ PP Sbjct 355 IPGTYGDTGMEPP 367 >gi|41407709|ref|NP_960545.1| hypothetical protein MAP1611 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41396062|gb|AAS03928.1| hypothetical protein MAP_1611 [Mycobacterium avium subsp. paratuberculosis K-10] Length=383 Score = 375 bits (963), Expect = 6e-102, Method: Compositional matrix adjust. Identities = 222/385 (58%), Positives = 259/385 (68%), Gaps = 18/385 (4%) Query 1 LDTVLGLSITPTTLGWVLAEGHGADGAILDRNELELHSGRNAQAIHTAEQLAAEVLLAHE 60 +DTVLGLS+TPTT+GWVLAEGHGADG ILD EL LHSG +A AEQ+ EVL Sbjct 1 MDTVLGLSVTPTTVGWVLAEGHGADGTILDHQELALHSGGAVRAASAAEQVVDEVLRVEA 60 Query 61 VAAAGDHRLRVIGVTWNAEASAQAALLVESLTGAGFDNVVPVRRLRAIETLAQAIAPVIG 120 AA D RLRVIGVTWN EAS AAL++E+LT AG NVVPVR L+A+ETLAQAIAPVIG Sbjct 61 AAAGSDRRLRVIGVTWNDEASVPAALVLEALTDAGLHNVVPVRFLQAVETLAQAIAPVIG 120 Query 121 YEQIAVCVLEHESATVVMVDTHDGKTQIAVKHVCRGLSGLTSWLTGMFGRDAWRPAGVVV 180 YEQ AVCVLEH+ TVVMVD+HDG+TQ A K V G GLT WLTGMF RD W+P G+VV Sbjct 121 YEQTAVCVLEHDWTTVVMVDSHDGQTQTATKQVRGGFDGLTRWLTGMFERDGWQPGGIVV 180 Query 181 VGSDSEVSEFSWQLERVLPVPVFAQTMAQVTVARGAALAAAQSTEFTDAQLVADSVSQPT 240 VG+ S++ SWQLE+ LPVPVF Q+MAQVT+ARGAAL+AA+STEFTD QLVA T Sbjct 181 VGAHSDIDGLSWQLEKALPVPVFVQSMAQVTIARGAALSAARSTEFTDEQLVARRSEPVT 240 Query 241 VAPRRSRH--YAGAAAALAAAAVTFVASLSLAVGIQLAPHNDTGTAKHGAHKPTPRIAKA 298 AP R R YAGA AL A A++FV S+SLAVGI + P + T AKH H P P++A+A Sbjct 241 PAPVRHRRLSYAGAMTALTAGAISFVGSVSLAVGIHVGPASATAAAKHATHPPAPQVAEA 300 Query 299 VAPAVPPPPTVTPPVPARAPRPAAQHEPPARVTSGEALTEPNPPEEQPNASAPQQ-DRND 357 V P P VP P+ P A +EQP +Q + + Sbjct 301 VKAVTP-----LPAVPQTKPQIKPPSGPAPAPAGEPAAP-----DEQPGIGDDRQMESGN 350 Query 358 SQP-ITRVLEHIPGAYG----DSAP 377 QP +TRVLEHIPG G DSAP Sbjct 351 RQPYLTRVLEHIPGDTGEPAADSAP 375 >gi|342859536|ref|ZP_08716189.1| hypothetical protein MCOL_11673 [Mycobacterium colombiense CECT 3035] gi|342132668|gb|EGT85888.1| hypothetical protein MCOL_11673 [Mycobacterium colombiense CECT 3035] Length=367 Score = 366 bits (940), Expect = 3e-99, Method: Compositional matrix adjust. Identities = 218/371 (59%), Positives = 261/371 (71%), Gaps = 20/371 (5%) Query 9 ITPTTLGWVLAEGHGADGAILDRNELELHSGRNAQAIHTAEQLAAEVLLAHEVAAAGDHR 68 +TPT +GWV+AEGHGADG ILD EL L +G +A+ TAEQ+ EVL A AAA DHR Sbjct 1 MTPTAVGWVVAEGHGADGTILDHQELALRAGHGVRAVGTAEQVVDEVLRAETTAAASDHR 60 Query 69 LRVIGVTWNAEASAQAALLVESLTGAGFDNVVPVRRLRAIETLAQAIAPVIGYEQIAVCV 128 LRVIGVTW EASAQAAL++E+LT AGFDNVVP+R L A+ETLAQAIAPVIGYEQ AVC+ Sbjct 61 LRVIGVTWTDEASAQAALVLEALTDAGFDNVVPIRFLDAVETLAQAIAPVIGYEQTAVCI 120 Query 129 LEHESATVVMVDTHDGKTQIAVKHVCRGLSGLTSWLTGMFGRDAWRPAGVVVVGSDSEVS 188 L+H+ TV MVDTHDG+TQ A KHV G GLT WLTGMF R+ W+P GVVVVG S++ Sbjct 121 LDHDVTTVAMVDTHDGETQTATKHVRGGFDGLTRWLTGMFERNGWQPGGVVVVGGHSDID 180 Query 189 EFSWQLERVLPVPVFAQTMAQVTVARGAALAAAQSTEFTDAQLVADSVSQPTVAPRRSRH 248 SWQLE+ LPVPVF Q+MAQVT+ARGAAL+AA+STEFTD QLV + VS+P AP + R Sbjct 181 GLSWQLEKTLPVPVFVQSMAQVTIARGAALSAARSTEFTDEQLV-EHVSEPVPAPAQKRQ 239 Query 249 --YAGAAAALAAAAVTFVASLSLAVGIQLAPHNDTGTAKHGAHKPTPRIAKAVAPAVPPP 306 Y+GA ALAA A+TFV S+SLAVGI + P + KH H PTP+IA+A Sbjct 240 LSYSGALTALAAGAITFVGSVSLAVGIHVGPASAAPAPKHATHPPTPQIAEA-------- 291 Query 307 PTVTPPVPARAPRPAAQHEPPARVTSGEALTEPNPPEEQPNASAPQQDRNDSQP-ITRVL 365 VT P A P A+ +GE +++P+PPEEQP D QP +TRVL Sbjct 292 --VTAVAPLPAAPPTKPAAAQAKPPAGEPVSQPSPPEEQPGTG------GDRQPYLTRVL 343 Query 366 EHIPGAYGDSA 376 EHIPG G+ A Sbjct 344 EHIPGDTGEPA 354 >gi|118464401|ref|YP_882001.1| hypothetical protein MAV_2814 [Mycobacterium avium 104] gi|118165688|gb|ABK66585.1| conserved hypothetical protein [Mycobacterium avium 104] Length=375 Score = 360 bits (925), Expect = 1e-97, Method: Compositional matrix adjust. Identities = 215/376 (58%), Positives = 252/376 (68%), Gaps = 16/376 (4%) Query 9 ITPTTLGWVLAEGHGADGAILDRNELELHSGRNAQAIHTAEQLAAEVLLAHEVAAAGDHR 68 +TPTT+GWVLAEGHGADG ILD EL LHSG +A AEQ+ EVL AA D R Sbjct 1 MTPTTVGWVLAEGHGADGTILDHQELALHSGGAVRAASAAEQVVDEVLRVEAAAAGSDQR 60 Query 69 LRVIGVTWNAEASAQAALLVESLTGAGFDNVVPVRRLRAIETLAQAIAPVIGYEQIAVCV 128 LRVIGVTWN EAS AAL++E+LT AG NVVPVR L+A+ETLAQAIAPVIGYEQ AVCV Sbjct 61 LRVIGVTWNDEASVPAALVLEALTDAGLHNVVPVRFLQAVETLAQAIAPVIGYEQTAVCV 120 Query 129 LEHESATVVMVDTHDGKTQIAVKHVCRGLSGLTSWLTGMFGRDAWRPAGVVVVGSDSEVS 188 LEH+ TVVMVD+HDG+TQ A K V G GLT WLTGMF RD W+P G+VVVG+ S++ Sbjct 121 LEHDWTTVVMVDSHDGQTQTATKQVRGGFDGLTRWLTGMFERDGWQPGGIVVVGAHSDID 180 Query 189 EFSWQLERVLPVPVFAQTMAQVTVARGAALAAAQSTEFTDAQLVADSVSQPTVAPRRSRH 248 SWQLE+ LPVPVF Q+MAQVT+ARGAAL+AA+STEFTD QLVA T AP R R Sbjct 181 GLSWQLEKALPVPVFVQSMAQVTIARGAALSAARSTEFTDEQLVARRSEPVTPAPVRHRR 240 Query 249 --YAGAAAALAAAAVTFVASLSLAVGIQLAPHNDTGTAKHGAHKPTPRIAKAVAPAVPPP 306 YAGA AL A A++FV S+SLAVGI + P + T AKH H P P++A+AV P P Sbjct 241 LSYAGAMTALTAGAISFVGSVSLAVGIHVGPASATAAAKHATHPPAPQVAEAVKAVTPLP 300 Query 307 PTVTPPVPARAPRPAAQHEPPARVTSGEALTEPNPPEEQPNASAPQQDRNDSQP-ITRVL 365 AP+ Q +PP+ A P E+ Q + + QP +TRVL Sbjct 301 ---------AAPQTKPQTKPPSGPAPAPAGEPAAPDEQPGIGDDRQMESGNRQPYLTRVL 351 Query 366 EHIPGAYG----DSAP 377 EHIPG G DSAP Sbjct 352 EHIPGDTGEPAADSAP 367 >gi|254819292|ref|ZP_05224293.1| hypothetical protein MintA_05163 [Mycobacterium intracellulare ATCC 13950] Length=294 Score = 352 bits (903), Expect = 7e-95, Method: Compositional matrix adjust. Identities = 194/296 (66%), Positives = 227/296 (77%), Gaps = 4/296 (1%) Query 9 ITPTTLGWVLAEGHGADGAILDRNELELHSGRNAQAIHTAEQLAAEVLLAHEVAAAGDHR 68 +TPT +GWVLAEGHGADG ILD EL L +GR +A++TAEQ+ EVL AAA D R Sbjct 1 MTPTAVGWVLAEGHGADGTILDHQELALRAGRGVRAVNTAEQVVDEVLRVDTAAAASDQR 60 Query 69 LRVIGVTWNAEASAQAALLVESLTGAGFDNVVPVRRLRAIETLAQAIAPVIGYEQIAVCV 128 LRVIGVTWN +A+AQAAL++E+LT AGFDNVVPVR L AIETLAQAIAPVIGYEQ AVC+ Sbjct 61 LRVIGVTWNDDAAAQAALVLEALTDAGFDNVVPVRFLEAIETLAQAIAPVIGYEQTAVCI 120 Query 129 LEHESATVVMVDTHDGKTQIAVKHVCRGLSGLTSWLTGMFGRDAWRPAGVVVVGSDSEVS 188 L+H++ TVVMVDT DG+TQ A K V GL GLT WLTGMF RD W+P GVVVVG+ ++ Sbjct 121 LDHDATTVVMVDTQDGETQTATKQVRGGLDGLTRWLTGMFDRDGWQPGGVVVVGAHRDID 180 Query 189 EFSWQLERVLPVPVFAQTMAQVTVARGAALAAAQSTEFTDAQLVADSVSQPTVAPRRSRH 248 FSWQLE+ LPVPVF Q+MAQVT+ARGAAL+AA+STEFTD QLVA + AP R RH Sbjct 181 GFSWQLEKALPVPVFVQSMAQVTIARGAALSAARSTEFTDDQLVAHHSEPISSAPARQRH 240 Query 249 --YAGAAAALAAAAVTFVASLSLAVGIQLAPHNDTGTAKHGAHKPTPRIAKAVAPA 302 YAGA ALAA AVTFV S+SLAVGI + P + +KH H TP+ A+A APA Sbjct 241 LSYAGALTALAAGAVTFVGSVSLAVGIHVGPAS-APASKHTTHPSTPQAAEA-APA 294 >gi|296164908|ref|ZP_06847464.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295899750|gb|EFG79200.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=370 Score = 346 bits (887), Expect = 5e-93, Method: Compositional matrix adjust. Identities = 229/393 (59%), Positives = 261/393 (67%), Gaps = 41/393 (10%) Query 1 LDTVLGLSITPTTLGWVLAEGHGADGAILDRNELELHSGRNAQAIHTAEQLAAEVLLAHE 60 L+TVLGLS+TPT +GWVLAEGHGADG ILD EL LH+GR A+A TAE++ E+ Sbjct 3 LETVLGLSVTPTAVGWVLAEGHGADGTILDHQELALHAGRGARAASTAEEVVDEIARVEA 62 Query 61 VAAAGDHRLRVIGVTWNAEASAQAALLVESLTGAGFDNVVPVRRLRAIETLAQAIAPVIG 120 AAA +HRLR+IGVTWN EA+AQAALL+E+LT AGFDNVVPVR+L A+ETLAQAIAP+IG Sbjct 63 QAAASEHRLRIIGVTWNDEAAAQAALLLEALTDAGFDNVVPVRQLEAVETLAQAIAPIIG 122 Query 121 YEQIAVCVLEHESATVVMVDTHDGKTQIAVKHVCRGLSGLTSWLTGMFGRDAWRPAGVVV 180 YEQ AVCVL+ ++ TVVMVDTHDG+TQ A K V G GLT WLTGMF RD WRP GVVV Sbjct 123 YEQTAVCVLDQDATTVVMVDTHDGQTQTATKQVRGGFDGLTRWLTGMFDRDGWRPGGVVV 182 Query 181 VGSDSEVSEFSWQLERVLPVPVFAQTMAQVTVARGAALAAAQSTEFTDAQL-VADSVSQP 239 VG+ +++ FSW+LE LPVPVF Q MAQVT+ARGAALAAA+STEF+D L V Sbjct 183 VGAHNDIDGFSWRLENALPVPVFVQAMAQVTIARGAALAAARSTEFSDDLLAVHPGEPAA 242 Query 240 TVAPRRSRHYAGAAAALAAAAVTFVASLSLAVGIQLAPHNDTGTAKHGAHKPTPRIAKAV 299 R Y GAA LAA VTFVASLSLAVGIQLAP A KP PR A Sbjct 243 APPAPRKLSYTGAATTLAAGVVTFVASLSLAVGIQLAP----------ASKPAPRHA--- 289 Query 300 APAVPPPPTVTPPVPARAPRPAAQHE-----PPARVTSGEALTEPNPPEEQPNASAPQQD 354 V PP P A A P A+V + E LTEP PE QP + Sbjct 290 ---------VHPPAPQVAEAVAPPPVVAPLTPQAKVRADEPLTEPAAPEVQP------PE 334 Query 355 RNDSQP-ITRVLEHIP----GAYGDSAP--PAE 380 N QP +TRVLEHIP GDSAP PAE Sbjct 335 PNGRQPYLTRVLEHIPVDSGEPTGDSAPQAPAE 367 >gi|336457548|gb|EGO36554.1| hypothetical protein MAPs_22200 [Mycobacterium avium subsp. paratuberculosis S397] Length=348 Score = 317 bits (811), Expect = 3e-84, Method: Compositional matrix adjust. Identities = 193/350 (56%), Positives = 228/350 (66%), Gaps = 18/350 (5%) Query 36 LHSGRNAQAIHTAEQLAAEVLLAHEVAAAGDHRLRVIGVTWNAEASAQAALLVESLTGAG 95 +HSG +A AEQ+ EVL AA D RLRVIGVTWN EAS AAL++E+LT AG Sbjct 1 MHSGGAVRAASAAEQVVDEVLRVEAAAAGSDRRLRVIGVTWNDEASVPAALVLEALTDAG 60 Query 96 FDNVVPVRRLRAIETLAQAIAPVIGYEQIAVCVLEHESATVVMVDTHDGKTQIAVKHVCR 155 NVVPVR L+A+ETLAQAIAPVIGYEQ AVCVLEH+ TVVMVD+HDG+TQ A K V Sbjct 61 LHNVVPVRFLQAVETLAQAIAPVIGYEQTAVCVLEHDWTTVVMVDSHDGQTQTATKQVRG 120 Query 156 GLSGLTSWLTGMFGRDAWRPAGVVVVGSDSEVSEFSWQLERVLPVPVFAQTMAQVTVARG 215 G GLT WLTGMF RD W+P G+VVVG+ S++ SWQLE+ LPVPVF Q+MAQVT+ARG Sbjct 121 GFDGLTRWLTGMFERDGWQPGGIVVVGAHSDIDGLSWQLEKALPVPVFVQSMAQVTIARG 180 Query 216 AALAAAQSTEFTDAQLVADSVSQPTVAPRRSRH--YAGAAAALAAAAVTFVASLSLAVGI 273 AAL+AA+STEFTD QLVA T AP R R YAGA AL A A++FV S+SLAVGI Sbjct 181 AALSAARSTEFTDEQLVARRSEPVTPAPVRHRRLSYAGAMTALTAGAISFVGSVSLAVGI 240 Query 274 QLAPHNDTGTAKHGAHKPTPRIAKAVAPAVPPPPTVTPPVPARAPRPAAQHEPPARVTSG 333 + P + T AKH H P P++A+AV P P VP P+ P Sbjct 241 HVGPASATAAAKHATHPPAPQVAEAVKAVTP-----LPAVPQTKPQTKPPSGPAPAPAGE 295 Query 334 EALTEPNPPEEQPNASAPQQ-DRNDSQP-ITRVLEHIPGAYG----DSAP 377 A +EQP +Q + + QP +TRVLEHIPG G DSAP Sbjct 296 PAAP-----DEQPGIGDDRQMESGNRQPYLTRVLEHIPGDTGEPAADSAP 340 >gi|254775294|ref|ZP_05216810.1| hypothetical protein MaviaA2_11571 [Mycobacterium avium subsp. avium ATCC 25291] Length=342 Score = 311 bits (796), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 190/343 (56%), Positives = 224/343 (66%), Gaps = 18/343 (5%) Query 43 QAIHTAEQLAAEVLLAHEVAAAGDHRLRVIGVTWNAEASAQAALLVESLTGAGFDNVVPV 102 +A AEQ+ EVL AA D RLRVIGVTWN EAS AAL++E+LT AG NVVPV Sbjct 2 RAASAAEQVVDEVLRVEAAAAGSDRRLRVIGVTWNDEASVPAALVLEALTDAGLHNVVPV 61 Query 103 RRLRAIETLAQAIAPVIGYEQIAVCVLEHESATVVMVDTHDGKTQIAVKHVCRGLSGLTS 162 R L+A+ETLAQAIAPVIGYEQ AVCVLEH+ TVVMVD+HDG+TQ A K V G GLT Sbjct 62 RFLQAVETLAQAIAPVIGYEQTAVCVLEHDWTTVVMVDSHDGQTQTATKQVRGGFDGLTR 121 Query 163 WLTGMFGRDAWRPAGVVVVGSDSEVSEFSWQLERVLPVPVFAQTMAQVTVARGAALAAAQ 222 WLTGMF RD W+P G+VVVG+ S++ SWQLE+ LPVPVF Q+MAQVT+ARGAAL+AA+ Sbjct 122 WLTGMFERDGWQPGGIVVVGAHSDIDGLSWQLEKALPVPVFVQSMAQVTIARGAALSAAR 181 Query 223 STEFTDAQLVADSVSQPTVAPRRSRH--YAGAAAALAAAAVTFVASLSLAVGIQLAPHND 280 STEFTD QLVA T AP R R YAGA AL A A++FV S+SLAVGI + P + Sbjct 182 STEFTDEQLVARRSEPVTPAPVRHRRLSYAGAMTALTAGAISFVGSVSLAVGIHVGPASA 241 Query 281 TGTAKHGAHKPTPRIAKAVAPAVPPPPTVTPPVPARAPRPAAQHEPPARVTSGEALTEPN 340 T AKH H P P++A+AV P P VP P+ P A Sbjct 242 TAAAKHATHPPAPQVAEAVKAVTP-----LPAVPQTKPQTKPPSGPAPAPAGEPAAP--- 293 Query 341 PPEEQPNASAPQQ-DRNDSQP-ITRVLEHIPGAYG----DSAP 377 +EQP +Q + + QP +TRVLEHIPG G DSAP Sbjct 294 --DEQPGIGDDRQMESGNRQPYLTRVLEHIPGDTGEPAADSAP 334 >gi|120404001|ref|YP_953830.1| FHA domain-containing protein [Mycobacterium vanbaalenii PYR-1] gi|119956819|gb|ABM13824.1| FHA domain containing protein [Mycobacterium vanbaalenii PYR-1] Length=428 Score = 167 bits (423), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 118/278 (43%), Positives = 161/278 (58%), Gaps = 5/278 (1%) Query 1 LDTVLGLSITPTTLGWVLAEGHGADGAILDRNELELHSGRNAQAIHTAEQLAAEVLLAHE 60 +D VLGLS+TP+ +G VL EG DG LD + E+ A A+ T+EQ A V + Sbjct 1 MDAVLGLSVTPSAVGLVLVEGQDVDGVTLDGDGFEVGGDGAAGALCTSEQATAAVRRSEA 60 Query 61 VAAAGDHRLRVIGVTWNAEASAQAALLVESLTGAGFDNVVPVRRLRAIETLAQAIAPVIG 120 VAA R+ IGVTW+ +A +A+LL++SL+ AGFDN+VPVR A + LA+ IA ++G Sbjct 61 VAADLGRRVHAIGVTWSDDADTEASLLLKSLSEAGFDNIVPVRLSEATDALARRIAKLMG 120 Query 121 YEQIAVCVLEHESATVVMVDTHDGKTQIAVKHVCRGLSGLTSWLTGMFGRDAWRPAGVVV 180 Y AVCV+E E + +V T +G Q AV H L WL+ +F R W P +V+ Sbjct 121 YRTTAVCVIEPEQ-LIALVATDEGAVQTAVNHSVVTEEDLIGWLSSVFARADWAPEALVL 179 Query 181 VGSDSEVSEFSWQLERVLPVPVFAQTMAQVTVARGAALAAAQSTEFTDAQLVADSVSQPT 240 VGS ++ S LE L VPVF+ AQ+ +ARGAALA A + +F + S+ Sbjct 180 VGSAEDLDGLSPILEDALAVPVFSPDAAQLALARGAALACASNGDF---DVWPGPASERQ 236 Query 241 VAPRRSRHYAGA-AAALAAAAVTFVASLSLAVGIQLAP 277 P +R A A LAA VTFVAS+S+AV + L P Sbjct 237 TRPATTRFARSAPAVLLAAGVVTFVASVSVAVALALTP 274 >gi|118473362|ref|YP_887834.1| hypothetical protein MSMEG_3531 [Mycobacterium smegmatis str. MC2 155] gi|118174649|gb|ABK75545.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2 155] Length=476 Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 110/293 (38%), Positives = 146/293 (50%), Gaps = 29/293 (9%) Query 1 LDTVLGLSITPTTLGWVLAEGHGA--------DGAILDRNELELHSGRNAQAIHTAEQLA 52 +D V+G+S+TP+T+G VL EG A D + D L+L R A+ +++ Sbjct 1 MDAVIGVSVTPSTVGMVLVEGDSAADFEAVNLDLELFDVAGLDLSRARAAR-----KEIV 55 Query 53 AEVLLAHEVAAAGDHRLRVIGVTWNAEASAQAALLVESLTGAGFDNVVPVRRLRAIETLA 112 A V A VAA RLR IGVTW+ A QAA LV L AGFDNVV VR +A + LA Sbjct 56 ATVARAENVAADNGRRLRSIGVTWSDGADMQAAELVGDLNEAGFDNVVDVRFRQATDALA 115 Query 113 QAIAPVIGYEQIAVCVLEHESATVVMVDTHDGKTQIAVKHVCRGLSGLTSWLTGMFGRDA 172 +IA + G+ VCV E E A + VD DG A + GL WL + Sbjct 116 NSIADMAGFATTVVCVFEPEGALALTVDRRDGVVDTARSRAIGSVRGLVGWLERLLAASG 175 Query 173 WRPAGVVVVGS----DSEVSEFSWQLERVLPVPVFAQTMAQVTVARGAALAAAQSTEFTD 228 P +VVVGS D++V +L+ L +PVF + +ARGAAL +A+ F Sbjct 176 RVPDALVVVGSAVDLDADVDRLMPKLQAALGIPVFTPADGDLALARGAALVSARRGRF-- 233 Query 229 AQLVADSVSQPTVAPRRSR---HYAGAAAALAAAAVTFVASLSLAVGIQLAPH 278 + D Q +RSR AA L VTFV SLSLA+ Q++P Sbjct 234 --MFPDKADQ-----QRSRWTSRQLAPAAMLLVGVVTFVVSLSLAISQQMSPR 279 >gi|333990614|ref|YP_004523228.1| hypothetical protein JDM601_1974 [Mycobacterium sp. JDM601] gi|333486582|gb|AEF35974.1| conserved hypothetical protein [Mycobacterium sp. JDM601] Length=364 Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 113/281 (41%), Positives = 144/281 (52%), Gaps = 3/281 (1%) Query 1 LDTVLGLSITPTTLGWVLAEGHGADGAILDRNELELHSGR-NAQAIHTAEQLAAEVLLAH 59 +DTVLGL++TPTT+GWV+A+G L +E+ + G A+ A A Sbjct 1 MDTVLGLAMTPTTVGWVMADGRADHCPTLSGDEVGVTLGDAGLDAVSLAASATAVAARVR 60 Query 60 EVAAAGDHRLRVIGVTWNAEASAQAALLVESLTGAGFDNVVPVRRLRAIETLAQAIAPVI 119 V A RL +GVTW+ +A+ AALL+ESL AGF+NVV VR RA +L IAP Sbjct 61 TVLAGRGDRLHGVGVTWSDDAAVGAALLLESLADAGFENVVSVRFSRAAASLTTGIAPAG 120 Query 120 GYEQIAVCVLEHESATVVMVDTHDGKTQIAVKHVCRGLSGLTSWLTGMFGRDAWRPAGVV 179 G Q AVCV+E SAT+V D D I + WL FG RP + Sbjct 121 G--QTAVCVIEPGSATLVQFDGPDDGYPIVTGCPIGRTDDVVEWLADAFGSGGRRPGVLT 178 Query 180 VVGSDSEVSEFSWQLERVLPVPVFAQTMAQVTVARGAALAAAQSTEFTDAQLVADSVSQP 239 V GS + + +LE L +PVF Q AQ +ARGAALA A E T + + Sbjct 179 VAGSGRGMDRLARRLESKLSLPVFVQAGAQQALARGAALALAPHAELTSPRSAGRTGRAV 238 Query 240 TVAPRRSRHYAGAAAALAAAAVTFVASLSLAVGIQLAPHND 280 S YAGA L A AV FVAS+S AV +QL+P D Sbjct 239 GAGRSMSLPYAGALTMLTAGAVMFVASVSAAVTLQLSPSRD 279 >gi|145223887|ref|YP_001134565.1| hypothetical protein Mflv_3300 [Mycobacterium gilvum PYR-GCK] gi|315444216|ref|YP_004077095.1| hypothetical protein Mspyr1_26280 [Mycobacterium sp. Spyr1] gi|145216373|gb|ABP45777.1| hypothetical protein Mflv_3300 [Mycobacterium gilvum PYR-GCK] gi|315262519|gb|ADT99260.1| hypothetical protein Mspyr1_26280 [Mycobacterium sp. Spyr1] Length=418 Score = 139 bits (349), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 122/299 (41%), Positives = 162/299 (55%), Gaps = 12/299 (4%) Query 1 LDTVLGLSITPTTLGWVLAEGHGADGAILDRNELELHSGRNAQAIHTAEQLAAEVLLAHE 60 ++ VLGLS+TP+ +G VL EGH D LD E+ +A A T+ Q AA VL Sbjct 1 MNAVLGLSVTPSGVGVVLVEGHDDDRVTLDGERFEVRRRGSATAAETSAQAAAAVLRTEA 60 Query 61 VAAAGDHRLRVIGVTWNAEASAQAALLVESLTGAGFDNVVPVRRLRAIETLAQAIAPVIG 120 VAA R+ IGVTW+ +A +A+LL+ SL +G+DN+VPVR A + LA+ IA V+G Sbjct 61 VAADLGRRVHSIGVTWSDDAGTEASLLLTSLRESGYDNIVPVRLSEATDALARRIALVLG 120 Query 121 YEQIAVCVLEHESATVVMV---DTHDGKT---QIAVKHVCRGLSGLTSWLTGMFGRDAWR 174 Y AVCV+E E ++V D DG + Q AV H L WL+ +F R W Sbjct 121 YRTTAVCVIEPEQLIALVVSVEDAADGTSEAVQTAVNHSVVTEDDLVGWLSTVFTRADWE 180 Query 175 PAGVVVVGSDSEVSEFSWQLERVLPVPVFAQTMAQVTVARGAALAAAQSTEFTDAQLVAD 234 P +V+VGS ++ + LE L VPVF+ A + +ARGAALA AQ EF + Sbjct 181 PEALVLVGSGEDLEDLLPVLEDALAVPVFSPAEAALALARGAALACAQPGEFAAWE---H 237 Query 235 SVSQPTVAPRRSRHYAGA--AAALAAAAVTFVASLSLAVGIQLAPHNDTGTAKHGAHKP 291 + QP V P +R A LAA A+TFVAS S AV +QL P + A P Sbjct 238 TTRQP-VTPHATRRRRRRWPQALLAAGAITFVASASAAVALQLTPEPIASPPRSAAESP 295 >gi|108797411|ref|YP_637608.1| hypothetical protein Mmcs_0431 [Mycobacterium sp. MCS] gi|119866495|ref|YP_936447.1| hypothetical protein Mkms_0441 [Mycobacterium sp. KMS] gi|108767830|gb|ABG06552.1| conserved hypothetical protein [Mycobacterium sp. MCS] gi|119692584|gb|ABL89657.1| conserved hypothetical protein [Mycobacterium sp. KMS] Length=603 Score = 118 bits (296), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 76/207 (37%), Positives = 120/207 (58%), Gaps = 6/207 (2%) Query 1 LDTVLGLSITPTTLGWVLAEGHGADGAILDRNELELHSGRNAQAIHTAEQLAAEVLLAHE 60 +D VLG+S+TPTT+ VL EG ADG +D + ++++ + + A+Q+ A VL E Sbjct 28 VDIVLGVSMTPTTVRMVLVEGEKADGVTVDHDVFDINAVEGSATSNAADQVVAAVLGTQE 87 Query 61 VAAAGDHRLRVIGVTWNAEASAQAALLVESLTGAGFDNVVPVRRLRAIETLAQAIAPVIG 120 AAAG H LR +GV W+ ASA A L ++LT G ++V+ V A +LAQA+ +G Sbjct 88 SAAAGGHHLRSVGVAWSDHASAAA--LRDTLTARGIEDVMLVSEGHAAASLAQAVGRAVG 145 Query 121 YEQIAVCVLEHESATVVMVDTHDGK-TQIAVK--HVCRGLSGLTSWLTGMFGRDAWRPAG 177 Y A+ ++ ++AT+ +V T DG T++ + H ++ LT + +D+ P G Sbjct 146 YTATALFFIDRDAATLSVVQTDDGSVTKVLSRSLHSTDAMAVLTEMAAAVDAQDS-PPQG 204 Query 178 VVVVGSDSEVSEFSWQLERVLPVPVFA 204 + VVGS +VSE L R+L +P+ A Sbjct 205 MFVVGSGVDVSEVKAHLGRLLSLPINA 231 >gi|126433030|ref|YP_001068721.1| hypothetical protein Mjls_0418 [Mycobacterium sp. JLS] gi|126232830|gb|ABN96230.1| hypothetical protein Mjls_0418 [Mycobacterium sp. JLS] Length=601 Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 74/207 (36%), Positives = 120/207 (58%), Gaps = 6/207 (2%) Query 1 LDTVLGLSITPTTLGWVLAEGHGADGAILDRNELELHSGRNAQAIHTAEQLAAEVLLAHE 60 +D VLG+S+TPTT+ VL EG ADG +D + ++++ + + A+Q+ A VL E Sbjct 28 VDIVLGVSMTPTTVRMVLVEGDKADGVTVDHDVFDINAVEGSATSNAADQVVAAVLGTQE 87 Query 61 VAAAGDHRLRVIGVTWNAEASAQAALLVESLTGAGFDNVVPVRRLRAIETLAQAIAPVIG 120 AAAG H LR +GV W+ ASA A L ++LT G ++V+ V A +LAQA+ +G Sbjct 88 SAAAGGHHLRSVGVAWSDHASAAA--LRDTLTARGIEDVMLVSEGHAAASLAQAVGRAVG 145 Query 121 YEQIAVCVLEHESATVVMVDTHDGK-TQIAVK--HVCRGLSGLTSWLTGMFGRDAWRPAG 177 Y A+ ++ ++AT+ +V T DG T++ + H ++ +T + +++ P G Sbjct 146 YTATALFFIDRDAATLSVVQTDDGSVTKVLSRSLHSTDAMAVITEMAAAVDAQNS-PPQG 204 Query 178 VVVVGSDSEVSEFSWQLERVLPVPVFA 204 + VVGS +VSE L R+L +P+ A Sbjct 205 MFVVGSGVDVSEVKAHLGRLLSLPINA 231 >gi|118472489|ref|YP_885087.1| hypothetical protein MSMEG_0679 [Mycobacterium smegmatis str. MC2 155] gi|118173776|gb|ABK74672.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2 155] Length=562 Score = 102 bits (255), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 71/207 (35%), Positives = 115/207 (56%), Gaps = 6/207 (2%) Query 1 LDTVLGLSITPTTLGWVLAEGHGADGAILDRNELELHSGRNAQAIHTAEQLAAEVLLAHE 60 +D VLG+S+TPTT+ VL EG ADG +D + ++ + +A + A+Q+ A +L E Sbjct 1 MDIVLGVSMTPTTVRMVLVEGENADGITVDHDVFDVTAVEDAATMSAADQVVAAILGTQE 60 Query 61 VAAAGDHRLRVIGVTWNAEASAQAALLVESLTGAGFDNVVPVRRLRAIETLAQAIAPVIG 120 A AG H L+ IGVTW+ + A A L +SLT G D+V+ V A LAQA+ +G Sbjct 61 SADAGGHHLKSIGVTWSDHSDASA--LRDSLTAHGIDDVMLVSEGHAAAALAQAVGRAVG 118 Query 121 YEQIAVCVLEHESATVVMVDTHDG---KTQIAVKHVCRGLSGLTSWLTGMFGRDAWRPAG 177 Y+ A+ ++ ++AT+ +V T DG K + H ++ L+ + ++ P G Sbjct 119 YDTTALLFIDRDAATLSVVQTEDGSVVKVLGSSLHSTDAMAVLSDMAAAVVAQET-PPDG 177 Query 178 VVVVGSDSEVSEFSWQLERVLPVPVFA 204 + +VGS +VS L+ ++ +PV A Sbjct 178 MFIVGSGVDVSSVKEHLQHLVSMPVNA 204 >gi|254821494|ref|ZP_05226495.1| hypothetical protein MintA_16290 [Mycobacterium intracellulare ATCC 13950] Length=494 Score = 102 bits (254), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 73/235 (32%), Positives = 122/235 (52%), Gaps = 15/235 (6%) Query 1 LDTVLGLSITPTTLGWVLAEGHGADGAILDRNELELHSGRNAQAIHTAEQLAAEVLLAHE 60 +D VLG+S+ P+++ V+ +G ADGA ++ + +++ +A + ++++ + +L E Sbjct 1 MDIVLGVSMAPSSIQMVVLQGEYADGATVEEDAIDVTGADDAATVSASDRVISAILGTRE 60 Query 61 VAAAGDHRLRVIGVTWNAEASAQAALLVESLTGAGFDNVVPVRRLRAIETLAQAIAPVIG 120 AA L IGVTW + +AA L ++LT DNV+ V A LAQ + +G Sbjct 61 GAADAGLELSSIGVTWTDQ--FEAAALRDALTAHRLDNVMLVSAFLAAAALAQNVGGAMG 118 Query 121 YEQIAVCVLEHESATVVMVDTHDGKTQIAVKHVCRG---------LSGLTSWLTGMFGRD 171 YE+ AV ++E ++AT+ +V+T DG K R LSG+ + L + Sbjct 119 YERTAVLLVEPDTATLAVVETSDGSIPDVYKQQIRAESYGAAAEQLSGMVAGLEKL---- 174 Query 172 AWRPAGVVVVGSDSEVSEFSWQLERVLPVPVFAQTMAQVTVARGAALAAAQSTEF 226 +RP G+ VVGS +V L+ + V + +ARGAALA+A + F Sbjct 175 EYRPDGLFVVGSGVDVGPLKPALQTTTALDVSVAEEPETALARGAALASANAPLF 229 >gi|315442150|ref|YP_004075029.1| hypothetical protein Mspyr1_04840 [Mycobacterium sp. Spyr1] gi|315260453|gb|ADT97194.1| hypothetical protein Mspyr1_04840 [Mycobacterium sp. Spyr1] Length=541 Score = 99.4 bits (246), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 72/211 (35%), Positives = 109/211 (52%), Gaps = 14/211 (6%) Query 1 LDTVLGLSITPTTLGWVLAEGHGADGAILDRNELELHSGRNAQAIHTAEQLAAEVLLAHE 60 +D VLG+S+TPTT+ VL EG ADG +D + + S + + AE + + VL E Sbjct 1 MDIVLGVSMTPTTVRMVLVEGEKADGVTVDHDTFAVDSVEGSA--NAAEHVVSAVLGTRE 58 Query 61 VAAAGDHRLRVIGVTWNAEASAQAALLVESLTGAGFDNVVPVRRLRAIETLAQAIAPVIG 120 A G H L+ IGVTW+ A A A L ++L G D+V+ V A +LAQA+ + Sbjct 59 SAETGGHHLKSIGVTWSDHAEATA--LRDALAAHGIDDVMLVSESHAAASLAQAVGRAVD 116 Query 121 YEQIAVCVLEHESATVVMVDTHDGKTQIAVKHVCRGLSGLTSW--LTGMFGRDAWR---- 174 Y+ A+ ++ ++AT+ +V T DG VK + R L + L M R Sbjct 117 YDTTALLFVDRDTATLSVVKTDDGSV---VKVLSRSLHSADAMAVLAEMAAAIDTRTQDA 173 Query 175 -PAGVVVVGSDSEVSEFSWQLERVLPVPVFA 204 P G+ VVGS ++S L+ ++ VP+ A Sbjct 174 PPQGIFVVGSGVDISSVKDHLKHLVAVPIHA 204 >gi|145220894|ref|YP_001131572.1| hypothetical protein Mflv_0290 [Mycobacterium gilvum PYR-GCK] gi|145213380|gb|ABP42784.1| conserved hypothetical protein [Mycobacterium gilvum PYR-GCK] Length=553 Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 72/211 (35%), Positives = 109/211 (52%), Gaps = 14/211 (6%) Query 1 LDTVLGLSITPTTLGWVLAEGHGADGAILDRNELELHSGRNAQAIHTAEQLAAEVLLAHE 60 +D VLG+S+TPTT+ VL EG ADG +D + + S + + AE + + VL E Sbjct 1 MDIVLGVSMTPTTVRMVLVEGEKADGVTVDHDTFAVDSVEGSA--NAAEHVVSAVLGTRE 58 Query 61 VAAAGDHRLRVIGVTWNAEASAQAALLVESLTGAGFDNVVPVRRLRAIETLAQAIAPVIG 120 A G H L+ IGVTW+ A A A L ++L G D+V+ V A +LAQA+ + Sbjct 59 SAETGGHHLKSIGVTWSDHAEATA--LRDALAAHGIDDVMLVSESHAAASLAQAVGRAVD 116 Query 121 YEQIAVCVLEHESATVVMVDTHDGKTQIAVKHVCRGLSGLTSW--LTGMFGRDAWR---- 174 Y+ A+ ++ ++AT+ +V T DG VK + R L + L M R Sbjct 117 YDTTALLFVDRDTATLSVVKTDDGSV---VKVLSRSLHSADAMAVLAEMAAAIDTRTQDA 173 Query 175 -PAGVVVVGSDSEVSEFSWQLERVLPVPVFA 204 P G+ VVGS ++S L+ ++ VP+ A Sbjct 174 PPQGIFVVGSGVDISSVKDHLKHLVAVPIHA 204 >gi|296167772|ref|ZP_06849967.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295897072|gb|EFG76688.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=635 Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 73/231 (32%), Positives = 113/231 (49%), Gaps = 7/231 (3%) Query 1 LDTVLGLSITPTTLGWVLAEGHGADGAILDRNELELHSGRNAQAIHTAEQLAAEVLLAHE 60 LD VLG+S+ P ++ V+ EG ADGA ++ + ++ + A ++Q+ A +L E Sbjct 6 LDIVLGVSMAPASIQMVVLEGEYADGATVEEDVFDVAAADEAATASASDQVLAAILGTQE 65 Query 61 VAAAGDHRLRVIGVTWNAEASAQAALLVESLTGAGFDNVVPVRRLRAIETLAQAIAPVIG 120 AA + IGVTW + +AA L ++LT +NV+ V A LAQ + +G Sbjct 66 GAADAGLEVSSIGVTWTDQ--LEAAALHDALTAHRIENVMLVSAFLAATALAQNVGAAMG 123 Query 121 YEQIAVCVLEHESATVVMVDTHDGKTQIAVKH--VCRGLSGLTSWLTGMFG---RDAWRP 175 YE+ AV +E ++AT+ +V+T DG K + L GM R P Sbjct 124 YERTAVMFVEPDTATLAVVETSDGSIPDVYKQPLYAESYDQAAAQLGGMIAGLERLEAAP 183 Query 176 AGVVVVGSDSEVSEFSWQLERVLPVPVFAQTMAQVTVARGAALAAAQSTEF 226 GV VVGS ++ L+ + V + +ARGAALA+A + F Sbjct 184 DGVFVVGSGVDIVPLKPALQTATTLEVSVPEEPETALARGAALASANAPLF 234 >gi|120401606|ref|YP_951435.1| hypothetical protein Mvan_0590 [Mycobacterium vanbaalenii PYR-1] gi|119954424|gb|ABM11429.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1] Length=543 Score = 90.5 bits (223), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 64/199 (33%), Positives = 102/199 (52%), Gaps = 8/199 (4%) Query 9 ITPTTLGWVLAEGHGADGAILDRNELELHSGRNAQAIHTAEQLAAEVLLAHEVAAAGDHR 68 +TPTT+ VL EG ADG +D + + S + + AE + + + E A G H Sbjct 1 MTPTTVRMVLVEGEKADGVTVDHDVFHVDSADGSANV--AEHVVSAIQGTKESAETGGHH 58 Query 69 LRVIGVTWNAEASAQAALLVESLTGAGFDNVVPVRRLRAIETLAQAIAPVIGYEQIAVCV 128 LR IGVTW+ A A L ++L G D+V+ V A +LAQA+ +GY+ A+ Sbjct 59 LRSIGVTWSDHTEATA--LRDALATHGIDDVMLVSEGHAAASLAQAVGRAVGYDTTALLF 116 Query 129 LEHESATVVMVDTHDGKTQIAVK---HVCRGLSGLTSWLTGMFGRDAWRPAGVVVVGSDS 185 ++ ++AT+ +V T DG + H ++ LT + ++A P G+ VVGS Sbjct 117 VDRDTATLSVVQTDDGSVVKVLSRSLHSADAMAVLTEMAEAVAAQEA-PPQGMFVVGSGV 175 Query 186 EVSEFSWQLERVLPVPVFA 204 ++S LE ++ +PV A Sbjct 176 DISSVKAHLEHLVSLPVSA 194 >gi|342859179|ref|ZP_08715833.1| hypothetical protein MCOL_09883 [Mycobacterium colombiense CECT 3035] gi|342133420|gb|EGT86623.1| hypothetical protein MCOL_09883 [Mycobacterium colombiense CECT 3035] Length=468 Score = 89.7 bits (221), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 68/228 (30%), Positives = 112/228 (50%), Gaps = 8/228 (3%) Query 4 VLGLSITPTTLGWVLAEGHGADGAILDRNELELHSGRNAQAIHTAEQLAAEVLLAHEVAA 63 VLG+S+TPT + VL EG ADG +D + ++ + R A ++ + +L E A Sbjct 5 VLGVSMTPTKVRMVLVEGESADGVTVDEEDFDVDTQRTAVPGTAPNEVISAILGTREGAT 64 Query 64 AGDHRLRVIGVTWNAEASAQAALLVESLTGAGFDNVVPVRRLRAIETLAQAIAPVIGYEQ 123 G ++L GVTW +AA+L ++L +NV+ V A L QA+ Y + Sbjct 65 DGGYQLLSTGVTWTDH--VEAAMLRDALIAHKVENVMLVSAFMAAAALTQAVGDATNYAR 122 Query 124 IAVCVLEHESATVVMVDTHDGKTQIAVKHVC-----RGLSGLTSWLTGMFGRDAWRPAGV 178 A+ +E SAT+ +VDT DG + + + ++ L +G G + P G+ Sbjct 123 TALLFVEPYSATLAVVDTADGSVSEVRRRILPDDEDQAVAELVDMASGAEGLET-HPEGL 181 Query 179 VVVGSDSEVSEFSWQLERVLPVPVFAQTMAQVTVARGAALAAAQSTEF 226 V+VGS ++ LE + + ++ +ARGAALA+A + F Sbjct 182 VLVGSGVDIPLIKPVLEAATSLELSVPDEPEMALARGAALASANAPLF 229 >gi|296167779|ref|ZP_06849968.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295897065|gb|EFG76682.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=501 Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 68/230 (30%), Positives = 117/230 (51%), Gaps = 10/230 (4%) Query 4 VLGLSITPTTLGWVLAEGHGADGAILDRNELELHSG--RNAQAIHTAEQLAAEVLLAHEV 61 VLG+S+ PT + VL EG ADGA +D+++ ++ + R+ +Q+ + +L E Sbjct 5 VLGVSMAPTKVRMVLVEGECADGATVDQDQFDVAAAAYRSGGPSTAPDQVISAILGTREG 64 Query 62 AAAGDHRLRVIGVTWNAEASAQAALLVESLTGAGFDNVVPVRRLRAIETLAQAIAPVIGY 121 A G ++L GVTW +AA+L ++L +NV+ V A L QA+ GY Sbjct 65 AGEGGYQLLSTGVTWTDHV--EAAMLRDALIAHKLENVMLVSAFMAAAALTQAVGDATGY 122 Query 122 EQIAVCVLEHESATVVMVDTHDGKTQIAVKHVC-----RGLSGLTSWLTGMFGRDAWRPA 176 + A+ +E +AT+ +V++ DG + V ++ L ++G + RP Sbjct 123 ARAALLFVEPYTATLAVVNSADGSISEVHRRVLADDEDEAVAELVDMVSGADTLEG-RPE 181 Query 177 GVVVVGSDSEVSEFSWQLERVLPVPVFAQTMAQVTVARGAALAAAQSTEF 226 GVVV+GS ++ LE + + ++++ARGAALA+A + F Sbjct 182 GVVVIGSGVDIPLIKPALEAATSLQLSVPDEPEMSLARGAALASANAPLF 231 >gi|145225815|ref|YP_001136493.1| hypothetical protein Mflv_5241 [Mycobacterium gilvum PYR-GCK] gi|145218301|gb|ABP47705.1| hypothetical protein Mflv_5241 [Mycobacterium gilvum PYR-GCK] Length=384 Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 103/314 (33%), Positives = 155/314 (50%), Gaps = 49/314 (15%) Query 1 LDTVLGLSITPTTLGWVLAEGH-GADGAILDRNELELHSGRNAQAIHTAEQLAAEVLLAH 59 +D VLGLS+T +++ WV+ +G G + +DR + G +A+A+ + LL H Sbjct 1 MDLVLGLSMTSSSVRWVVVDGAAGEESRTIDRGSTPVDDGFDARAL-------VDRLLQH 53 Query 60 EVAAAGDHRLRVIGVTWNAEASAQAALLVESLTGAGFDNVVPVRRLRAIETLAQAIAPVI 119 V A +G+ W+ A + + + ++ T G +NV V + A E LA+ IA + Sbjct 54 SVHA--------VGLNWDITAESTVSAVWQAFTDRGVENVFAVSDVEAAEALARGIADIA 105 Query 120 GYEQIAVCVLEHESATVVMVDTHDGKTQIAVKHVCRGLSGLTSWLTGMFGRDAWRPAGVV 179 G E++ VCV E + + V H G T V S LT +A P V Sbjct 106 GCERLVVCVAEPGPSVLAAVTPH-GVTADRVDP-----SALTDV-------EALAPDAVF 152 Query 180 VVGSDSEVSEFSWQLERVLPVPVFAQTMAQVTVARGAALAAAQSTEFTDAQLVADSVSQP 239 V+GS +V+ +LE+ L PV + A + +ARGAALA+A + DAQ D+ ++ Sbjct 153 VLGS-GDVAPVVAELEQRLQAPVVSAEEADLALARGAALASASAVSILDAQ---DAPAR- 207 Query 240 TVAPRRSRHYAGAAAALAAAAVTFVASLSLAVGIQLAPHNDTGTAKHGAHKPTPRIAKAV 299 R+ A A LAAA VTFVASLS+A+G+ L P + P P++A+AV Sbjct 208 ----RKLTPTATLAGVLAAAVVTFVASLSVALGMTLTPDS-----------PAPQMARAV 252 Query 300 APAVPPPPTVTPPV 313 P P T PV Sbjct 253 TEPAPEPVTKPSPV 266 >gi|333988963|ref|YP_004521577.1| hypothetical protein JDM601_0323 [Mycobacterium sp. JDM601] gi|333484931|gb|AEF34323.1| conserved hypothetical protein [Mycobacterium sp. JDM601] Length=483 Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 76/231 (33%), Positives = 125/231 (55%), Gaps = 11/231 (4%) Query 1 LDTVLGLSITPTTLGWVLAEGHGADGAILDRNELELHSGRNAQAIHTAEQLAAEVLLAHE 60 +D VLG+S+ P+T+ VL EG GADG ++ ++ ++ G + Q+ E++ + +L E Sbjct 1 MDIVLGVSVAPSTVRMVLVEGEGADGVTVEHDDFDV--GADTQS--APERVVSAILGTRE 56 Query 61 VAAAGDHRLRVIGVTWNAEASAQAALLVESLTGAGFDNVVPVRRLRAIETLAQAIAPVIG 120 A G ++L GVTW+ A A A L E+L G +NV+ V A LAQA+ Sbjct 57 GAREGGYQLSSTGVTWSDPAEATA--LREALIGHKVENVMLVSAFLAAAALAQAVGSATR 114 Query 121 YEQIAVCVLEHESATVVMVDTHDGK-TQIAVKHVCRGLSGLTSWLTGMFG---RDAWRPA 176 Y + A+ +E ++AT+ +V++ DG+ T++ + + LT + R RP Sbjct 115 YARTALLFVEPDAATLAVVNSDDGEITEVHRQPLSPDDDSAVGELTELVAGAQRLESRPD 174 Query 177 GVVVVGSDS-EVSEFSWQLERVLPVPVFAQTMAQVTVARGAALAAAQSTEF 226 G+ VVGS V+ +L++ P+PV A + +ARGAALA+A + F Sbjct 175 GLFVVGSGGVNVAMIKPELDKASPLPVSAPEEPDMALARGAALASAHAPLF 225 >gi|118462913|ref|YP_883951.1| hypothetical protein MAV_4826 [Mycobacterium avium 104] gi|254777263|ref|ZP_05218779.1| hypothetical protein MaviaA2_21699 [Mycobacterium avium subsp. avium ATCC 25291] gi|118164200|gb|ABK65097.1| conserved hypothetical protein [Mycobacterium avium 104] Length=490 Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 69/227 (31%), Positives = 113/227 (50%), Gaps = 6/227 (2%) Query 4 VLGLSITPTTLGWVLAEGHGADGAILDRNELELHSGRNAQAIHTAEQLAAEVLLAHEVAA 63 VLG+++TPT + VL EG ADG +D ++ ++ + R A +Q+ + +L E AA Sbjct 5 VLGVAMTPTKVRMVLVEGESADGVTVDEDDFDVDTRRTALPGTAPDQVISAILGTREGAA 64 Query 64 AGDHRLRVIGVTWNAEASAQAALLVESLTGAGFDNVVPVRRLRAIETLAQAIAPVIGYEQ 123 ++L GVTW +AA+L ++L +NV+ V A L QA+ Y + Sbjct 65 DSGYQLLSTGVTWTDH--VEAAMLRDALIAYKVENVMLVSAFMAAAALTQAVGDATNYAR 122 Query 124 IAVCVLEHESATVVMVDTHDGK-TQIAVKHVCRGLSGLTSWLTGMFGRDA---WRPAGVV 179 A+ +E SAT+ +VDT DG +++ + + + L M RP G+V Sbjct 123 TAMLFVEPYSATMAVVDTADGSVSEVRRRPLPEDEDQAVAELVDMAASAESLPTRPEGLV 182 Query 180 VVGSDSEVSEFSWQLERVLPVPVFAQTMAQVTVARGAALAAAQSTEF 226 +VGS +V LE + + ++ +ARGAALA+A + F Sbjct 183 LVGSGVDVPLIKPALEAATSLELSVPDEPEMALARGAALASANAPLF 229 >gi|41409920|ref|NP_962756.1| hypothetical protein MAP3822 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41398753|gb|AAS06372.1| hypothetical protein MAP_3822 [Mycobacterium avium subsp. paratuberculosis K-10] Length=512 Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 69/227 (31%), Positives = 113/227 (50%), Gaps = 6/227 (2%) Query 4 VLGLSITPTTLGWVLAEGHGADGAILDRNELELHSGRNAQAIHTAEQLAAEVLLAHEVAA 63 VLG+++TPT + VL EG ADG +D ++ ++ + R A +Q+ + +L E AA Sbjct 24 VLGVAMTPTKVRMVLVEGESADGVTVDEDDFDVDTRRTALPGTAPDQVISAILGTREGAA 83 Query 64 AGDHRLRVIGVTWNAEASAQAALLVESLTGAGFDNVVPVRRLRAIETLAQAIAPVIGYEQ 123 ++L GVTW +AA+L ++L +NV+ V A L QA+ Y + Sbjct 84 DSGYQLLSTGVTWTDH--VEAAMLRDALIAHKVENVMLVSAFMAAAALTQAVGDATNYAR 141 Query 124 IAVCVLEHESATVVMVDTHDGK-TQIAVKHVCRGLSGLTSWLTGMFGRDA---WRPAGVV 179 A+ +E SAT+ +VDT DG +++ + + + L M RP G+V Sbjct 142 TAMLFVEPYSATMAVVDTADGSVSEVRRRPLPEDEDQAVAELVDMAASAESLPTRPEGLV 201 Query 180 VVGSDSEVSEFSWQLERVLPVPVFAQTMAQVTVARGAALAAAQSTEF 226 +VGS +V LE + + ++ +ARGAALA+A + F Sbjct 202 LVGSGVDVPLIKPALEAATSLELSVPDEPEMALARGAALASANAPLF 248 >gi|183980627|ref|YP_001848918.1| hypothetical protein MMAR_0601 [Mycobacterium marinum M] gi|183173953|gb|ACC39063.1| conserved hypothetical membrane protein [Mycobacterium marinum M] Length=561 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 73/234 (32%), Positives = 107/234 (46%), Gaps = 16/234 (6%) Query 1 LDTVLGLSITPTTLGWVLAEGHGADGAILDRNELELHSGRNAQAIHTAEQLAAEVLLAHE 60 LD VLG+S+ + L EG DG I++ + +L RN ++Q+ A +L E Sbjct 18 LDVVLGVSMAAADVRMALVEGEDGDGVIVEEDSFDLD--RNPVTSSASDQVVAAILGTRE 75 Query 61 VAAAGDHRLRVIGVTWNAEASAQAALLVESLTGAGFDNVVPVRRLRAIETLAQAIAPVIG 120 AA RL IGVTW QAA L ++L +NV+ V A L QA+ + Sbjct 76 GAADAGLRLSSIGVTWTD--PVQAAALRDALAWHKVENVMLVSGFLAAAALGQAVGGALS 133 Query 121 YEQIAVCVLEHESATVVMVDTHDGKTQIAVKHVCRGLSGLTSWLTGMFGRDAW------- 173 Y + AV +E ++AT+ +VDT DG +V VC+ L Sbjct 134 YARTAVLFIEPDTATLAVVDTADG----SVSEVCQQLLAEDDDAAVAEVVAMVAAAESLP 189 Query 174 -RPAGVVVVGSDSEVSEFSWQLERVLPVPVFAQTMAQVTVARGAALAAAQSTEF 226 RP GV VVG+ +V+ L+ + V ++ +ARGAALA + F Sbjct 190 ARPDGVYVVGTGVDVAMIKPALDAATSLTVSVSEEQEMALARGAALACGNAPLF 243 >gi|296169282|ref|ZP_06850925.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295896054|gb|EFG75729.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=331 Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 73/228 (33%), Positives = 120/228 (53%), Gaps = 5/228 (2%) Query 1 LDTVLGLSITPTTLGWVLAEGHGADGAILDRNELELHSGRNAQAIHTAEQLAAEVLLAHE 60 +D VLG+S+ P T+ V+ EG ADG ++++E E + ++ +Q+ A + E Sbjct 5 VDIVLGVSMAPETVRLVVIEGQDADGVTVEQDEFEFAADGDSATAGAVDQVLAAIGGTRE 64 Query 61 VAAAGDHRLRVIGVTWNAEASAQAALLVESLTGAGFDNVVPVRRLRAIETLAQAIAPVIG 120 A AG ++L GVTW A A L +++ G +V+ V L A LAQ + + Sbjct 65 GALAGGYQLVSTGVTWTDPAGVGA--LRDAMARHGMGSVMLVSPLLAAAALAQTVGYALD 122 Query 121 YEQIAVCVLEHESATVVMVDTHDGK-TQIAVKHVCRGLSG-LTSWLTGMFGRDAWRPAGV 178 YE IA+ +E SAT+ +VD DG + + + ++G L S + G+ R + R GV Sbjct 123 YEHIAMLFVEPASATLAVVDVTDGSIVDLHRQQLAGPVAGELASMVAGLTARGS-RADGV 181 Query 179 VVVGSDSEVSEFSWQLERVLPVPVFAQTMAQVTVARGAALAAAQSTEF 226 +VG ++++ LE P+ V A ++ +ARGAALA+A + F Sbjct 182 FLVGCGTDIAAVKPALEAASPLAVSAPEEPEMALARGAALASANAPLF 229 >gi|336460291|gb|EGO39193.1| hypothetical protein MAPs_42380 [Mycobacterium avium subsp. paratuberculosis S397] Length=483 Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 69/227 (31%), Positives = 113/227 (50%), Gaps = 6/227 (2%) Query 4 VLGLSITPTTLGWVLAEGHGADGAILDRNELELHSGRNAQAIHTAEQLAAEVLLAHEVAA 63 VLG+++TPT + VL EG ADG +D ++ ++ + R A +Q+ + +L E AA Sbjct 5 VLGVAMTPTKVRMVLVEGESADGVTVDEDDFDVDTRRTALPGTAPDQVISAILGTREGAA 64 Query 64 AGDHRLRVIGVTWNAEASAQAALLVESLTGAGFDNVVPVRRLRAIETLAQAIAPVIGYEQ 123 ++L GVTW +AA+L ++L +NV+ V A L QA+ Y + Sbjct 65 DSGYQLLSTGVTWTDH--VEAAMLRDALIAHKVENVMLVSAFMAAAALTQAVGDATNYAR 122 Query 124 IAVCVLEHESATVVMVDTHDGK-TQIAVKHVCRGLSGLTSWLTGMFGRDA---WRPAGVV 179 A+ +E SAT+ +VDT DG +++ + + + L M RP G+V Sbjct 123 TAMLFVEPYSATMAVVDTADGSVSEVRRRPLPEDEDQAVAELVDMAASAESLPTRPEGLV 182 Query 180 VVGSDSEVSEFSWQLERVLPVPVFAQTMAQVTVARGAALAAAQSTEF 226 +VGS +V LE + + ++ +ARGAALA+A + F Sbjct 183 LVGSGVDVPLIKPALEAATSLELSVPDEPEMGLARGAALASANAPLF 229 >gi|315442477|ref|YP_004075356.1| hypothetical protein Mspyr1_08230 [Mycobacterium sp. Spyr1] gi|315260780|gb|ADT97521.1| hypothetical protein Mspyr1_08230 [Mycobacterium sp. Spyr1] Length=384 Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 97/314 (31%), Positives = 152/314 (49%), Gaps = 49/314 (15%) Query 1 LDTVLGLSITPTTLGWVLAEGH-GADGAILDRNELELHSGRNAQAIHTAEQLAAEVLLAH 59 +D VLGLS+T +++ WV+ +G G + +DR + G +A+A+ + LL H Sbjct 1 MDLVLGLSMTSSSVRWVVVDGAAGEESRTIDRGSTPVDDGFDARAL-------VDRLLQH 53 Query 60 EVAAAGDHRLRVIGVTWNAEASAQAALLVESLTGAGFDNVVPVRRLRAIETLAQAIAPVI 119 V A +G+TW+ A + + + ++ T G +NV V + A E LA+ IA + Sbjct 54 SVHA--------VGLTWDITAESTVSAVWQAFTDRGVENVFAVSDVEAAEALARGIADIA 105 Query 120 GYEQIAVCVLEHESATVVMVDTHDGKTQIAVKHVCRGLSGLTSWLTGMFGRDAWRPAGVV 179 G E++ VCV E + + V H G++ + + + P V Sbjct 106 GCERLVVCVAEPGPSVLAAVTPH-------------GVTADRVDPSALTDVEPLAPDAVF 152 Query 180 VVGSDSEVSEFSWQLERVLPVPVFAQTMAQVTVARGAALAAAQSTEFTDAQLVADSVSQP 239 V+GS +V+ +LE+ L PV + A + +ARGAALA+A + DAQ D+ ++ Sbjct 153 VLGS-GDVAPVVAELEQRLQAPVVSAEEADLALARGAALASASAVSILDAQ---DAPAR- 207 Query 240 TVAPRRSRHYAGAAAALAAAAVTFVASLSLAVGIQLAPHNDTGTAKHGAHKPTPRIAKAV 299 R+ A A LAAA VTFV SLS+A+G+ L P P P++A+AV Sbjct 208 ----RKLTPTATLAGVLAAAVVTFVVSLSVALGMTLTP-----------DPPAPQMARAV 252 Query 300 APAVPPPPTVTPPV 313 P P T PV Sbjct 253 TEPAPEPVTKPSPV 266 >gi|169631374|ref|YP_001705023.1| hypothetical protein MAB_4296c [Mycobacterium abscessus ATCC 19977] gi|169243341|emb|CAM64369.1| Conserved hypothetical protein [Mycobacterium abscessus] Length=554 Score = 86.3 bits (212), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 105/375 (28%), Positives = 164/375 (44%), Gaps = 61/375 (16%) Query 1 LDTVLGLSITPTTLGWVLAEGHGADGAILDRNELELHSGRNAQAIHTAEQLAAEVLLAHE 60 +D VLG+S+TPTT VL EG GADG I+D + + + G T+EQ+ + ++ + Sbjct 1 MDVVLGVSMTPTTARLVLVEGAGADGRIVDTDTIVVSEGEGT----TSEQVLSAIVGTRD 56 Query 61 VAAAGDHRLRVIGVTWNAEASAQAALLVESLTGAGFDNVVPVRRLRAIETLAQAIAPVIG 120 G H L GV W+ A +AA L +SL G D V L A LA+A + V G Sbjct 57 GMLDGGHNLVSTGVVWSDHA--EAAELRDSLASRGIDGVEFFSALHAGGALAKAASSVTG 114 Query 121 YEQIAVCVLEHESATVVMVDTHDGK-TQIAVKHVCRGL-SGLTSWLTGMFGRDAWRPAGV 178 Y++ A+ V+E ++AT+ +VD+ DG +A + + G+ SG+ + L P GV Sbjct 115 YDKSALLVIEPQTATLAVVDSADGSIVGLASEPLITGVTSGVLANLVNPLKGKENAPDGV 174 Query 179 VVVGSDSEVSEFSWQLERVLPVPVFAQTMAQVTVARGAALAAAQSTEF------------ 226 ++G ++VS+ + L + +PV + ++ +ARGAALA+AQ +F Sbjct 175 FLLGLGTDVSDLAESLGDAIALPVNSPDQPELALARGAALASAQEPDFEASTALLGQAYS 234 Query 227 -----------------------TDAQLVADSVSQPTVAPRRSRHYAGAAAALAAAAVTF 263 T+ + D QP A R+ GA L + Sbjct 235 LEGPTGTGFAHPDAVTESAGEANTELREFEDFDDQP--AERKPFLLVGAPLLLVFGICSI 292 Query 264 VASLSLAVGIQLAPHNDTGTAKHGAHKPTPRIAKAVAPAVPPPP---------------T 308 ++SL V ++ + G + P A+A A PPP Sbjct 293 ALAVSLTVTVRSTVDQGPSSPDRGVVQ-NPLPAEAPKQAAPPPSPVEAPAPAVSPAPVQQ 351 Query 309 VTPPVPARAPRPAAQ 323 V P P P PA + Sbjct 352 VVAPAPQHNPAPAPK 366 >gi|118462981|ref|YP_883972.1| hypothetical protein MAV_4848 [Mycobacterium avium 104] gi|118164268|gb|ABK65165.1| conserved hypothetical protein [Mycobacterium avium 104] Length=462 Score = 85.9 bits (211), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 75/232 (33%), Positives = 109/232 (47%), Gaps = 10/232 (4%) Query 1 LDTVLGLSITPTTLGWVLAEGHGADGAILDRNELELHSGRNAQAIHTAEQLAAEVLLAHE 60 +D VLG+S+ P T+ V EG ADG +++ E + + A A+Q+ ++ E Sbjct 1 MDIVLGVSMAPGTVRLVAIEGQNADGVTVEQEEFAVGA-AGNSANSAADQVIDAIIGTRE 59 Query 61 VAAAGDHRLRVIGVTWNAEASAQAALLVESLTGAGFDNVVPVRRLRAIETLAQAIAPVIG 120 G HRL GVTW A A L +++ NV+ V L A LAQ + +G Sbjct 60 GVFEGGHRLTSTGVTWTDPTGAAA--LRDAIASHELGNVMLVSPLLAAAALAQTVGYALG 117 Query 121 YEQIAVCVLEHESATVVMVDTHDGKTQIAVKHVCRGLSG------LTSWLTGMFGRDAWR 174 Y I + +E SAT+ +VD DG +H G L + + G+ RD R Sbjct 118 YGHIGMLFVEPRSATLAVVDVSDGSIVDLHRHQIPHGPGAPVAAELAAMVAGLDARDT-R 176 Query 175 PAGVVVVGSDSEVSEFSWQLERVLPVPVFAQTMAQVTVARGAALAAAQSTEF 226 GV VVG +++ LE PVPV + +ARGAALA+A + F Sbjct 177 ADGVFVVGCGTDIVAVKPALEAASPVPVTGPEEPDMALARGAALASANAPLF 228 >gi|41409899|ref|NP_962735.1| hypothetical protein MAP3801 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41398732|gb|AAS06351.1| hypothetical protein MAP_3801 [Mycobacterium avium subsp. paratuberculosis K-10] Length=488 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 75/232 (33%), Positives = 108/232 (47%), Gaps = 10/232 (4%) Query 1 LDTVLGLSITPTTLGWVLAEGHGADGAILDRNELELHSGRNAQAIHTAEQLAAEVLLAHE 60 +D VLG+S+ P T+ V EG ADG +++ E + A A+Q+ ++ E Sbjct 27 VDIVLGVSMAPGTVRLVAIEGQNADGVTVEQEEFAV-GAAENSANSAADQVIDAIIGTRE 85 Query 61 VAAAGDHRLRVIGVTWNAEASAQAALLVESLTGAGFDNVVPVRRLRAIETLAQAIAPVIG 120 G HRL GVTW A A L +++ NV+ V L A LAQ + +G Sbjct 86 GVFEGGHRLTSTGVTWTDPTGAAA--LRDAIASHELGNVMLVSPLLAAAALAQTVGYALG 143 Query 121 YEQIAVCVLEHESATVVMVDTHDGKTQIAVKHVCRGLSG------LTSWLTGMFGRDAWR 174 Y I + +E SAT+ +VD DG +H G L + + G+ RD R Sbjct 144 YGHIGMLFVEPRSATLAVVDVSDGSIVDLHRHQIPHGPGAPVAAELAAMVAGLDARDT-R 202 Query 175 PAGVVVVGSDSEVSEFSWQLERVLPVPVFAQTMAQVTVARGAALAAAQSTEF 226 GV VVG +++ LE PVPV + +ARGAALA+A + F Sbjct 203 ADGVFVVGCGTDIVAVKPALEAASPVPVTGPEEPDMALARGAALASANAPLF 254 >gi|333988964|ref|YP_004521578.1| hypothetical protein JDM601_0324 [Mycobacterium sp. JDM601] gi|333484932|gb|AEF34324.1| conserved hypothetical protein [Mycobacterium sp. JDM601] Length=575 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 73/230 (32%), Positives = 110/230 (48%), Gaps = 10/230 (4%) Query 1 LDTVLGLSITPTTLGWVLAEGHGADGAILDRNELELHSGRNAQAIHTAEQLAAEVLLAHE 60 +D VLG+S P ++ VL EG A G +D + E+ + A +Q+ + +L E Sbjct 1 MDIVLGVSTAPPSVRMVLVEGENAGGVTVDEDGFEVDTAGAA----FPDQVVSAILGTQE 56 Query 61 VAAAGDHRLRVIGVTWNAEASAQAALLVESLTGAGFDNVVPVRRLRAIETLAQAIAPVIG 120 A G +RL GVT QA L ++L +NV+ V A LAQ + IG Sbjct 57 SAQQGGYRLASTGVT--VADQVQAGQLRDALADRRVENVMLVSAFLAAAALAQTVGGTIG 114 Query 121 YEQIAVCVLEHESATVVMVDTHDGK----TQIAVKHVCRGLSGLTSWLTGMFGRDAWRPA 176 YE+ A+ +E + AT+ +VD+ DG +++A+ + L GR RP Sbjct 115 YERTALMFIEPQGATLAVVDSTDGSITEVSRVALPPDDDAALAELTALAAQAGRLESRPD 174 Query 177 GVVVVGSDSEVSEFSWQLERVLPVPVFAQTMAQVTVARGAALAAAQSTEF 226 G+ VVGS V +L+ V +PV +ARGAALA+A + F Sbjct 175 GLFVVGSGVNVGLVKPELDAVSAIPVSVPEEPDTALARGAALASAHAPLF 224 >gi|336460239|gb|EGO39142.1| hypothetical protein MAPs_42670 [Mycobacterium avium subsp. paratuberculosis S397] Length=457 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 75/232 (33%), Positives = 108/232 (47%), Gaps = 10/232 (4%) Query 1 LDTVLGLSITPTTLGWVLAEGHGADGAILDRNELELHSGRNAQAIHTAEQLAAEVLLAHE 60 +D VLG+S+ P T+ V EG ADG +++ E + A A+Q+ ++ E Sbjct 1 MDIVLGVSMAPGTVRLVAIEGQNADGVTVEQEEFAV-GAAENSANSAADQVIDAIIGTRE 59 Query 61 VAAAGDHRLRVIGVTWNAEASAQAALLVESLTGAGFDNVVPVRRLRAIETLAQAIAPVIG 120 G HRL GVTW A A L +++ NV+ V L A LAQ + +G Sbjct 60 GVFEGGHRLTSTGVTWTDPTGAAA--LRDAIASHELGNVMLVSPLLAAAALAQTVGYALG 117 Query 121 YEQIAVCVLEHESATVVMVDTHDGKTQIAVKHVCRGLSG------LTSWLTGMFGRDAWR 174 Y I + +E SAT+ +VD DG +H G L + + G+ RD R Sbjct 118 YGHIGMLFVEPRSATLAVVDVSDGSIVDLHRHQIPHGPGAPVAAELAAMVAGLDARDT-R 176 Query 175 PAGVVVVGSDSEVSEFSWQLERVLPVPVFAQTMAQVTVARGAALAAAQSTEF 226 GV VVG +++ LE PVPV + +ARGAALA+A + F Sbjct 177 ADGVFVVGCGTDIVAVKPALEAASPVPVTGPEEPDMALARGAALASANAPLF 228 >gi|254777286|ref|ZP_05218802.1| hypothetical protein MaviaA2_21816 [Mycobacterium avium subsp. avium ATCC 25291] Length=356 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 77/232 (34%), Positives = 112/232 (49%), Gaps = 10/232 (4%) Query 1 LDTVLGLSITPTTLGWVLAEGHGADGAILDRNELELHSGRNAQAIHTAEQLAAEVLLAHE 60 +D VLG+S+ P T+ V EG ADG +++ E + + + A A+Q+ ++ E Sbjct 1 MDIVLGVSMAPGTVRLVAIEGQNADGVTVEQEEFAVGA-AESSANSAADQVIDAIIGTRE 59 Query 61 VAAAGDHRLRVIGVTWNAEASAQAALLVESLTGAGFDNVVPVRRLRAIETLAQAIAPVIG 120 G HRL GVTW A A L +++ NV+ V L A LAQ + +G Sbjct 60 GVFEGGHRLTSTGVTWTDPTGAAA--LRDAIASHELGNVMLVSPLLAAAALAQTVGYALG 117 Query 121 YEQIAVCVLEHESATVVMVDTHDGKTQIAVKHVCRGLSG------LTSWLTGMFGRDAWR 174 Y IA+ +E SAT+ +VD DG +H +G L S + G+ RD R Sbjct 118 YGHIAMLFVEPRSATLAVVDVSDGSIVDLHRHQIPHGAGAPVAAELASMVAGLDARDT-R 176 Query 175 PAGVVVVGSDSEVSEFSWQLERVLPVPVFAQTMAQVTVARGAALAAAQSTEF 226 GV VVG +++ LE PVPV + +ARGAALA+A + F Sbjct 177 ADGVFVVGCGTDIVAVKPALEAASPVPVTGPEEPDMALARGAALASANAPLF 228 >gi|183980628|ref|YP_001848919.1| hypothetical protein MMAR_0602 [Mycobacterium marinum M] gi|183173954|gb|ACC39064.1| conserved hypothetical membrane protein [Mycobacterium marinum M] Length=508 Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 71/208 (35%), Positives = 102/208 (50%), Gaps = 6/208 (2%) Query 1 LDTVLGLSITPTTLGWVLAEGHGADGAILDRNELELHSGRNAQAIHTAEQLAAEVLLAHE 60 LDTVLG+S+ PT + VL EG DGA++D + ++ +A I AEQ+ + +L E Sbjct 10 LDTVLGVSVAPTAVRLVLVEGENGDGALVDEDAFDVSGDGDAATIGAAEQVISAILGTRE 69 Query 61 VAAAGDHRLRVIGVTWNAEASAQAALLVESLTGAGFDNVVPVRRLRAIETLAQAIAPVIG 120 A+ G ++L GVTW AQAA L + L +NVV V A LA A+ Sbjct 70 GASEGGYQLTSTGVTWR--DPAQAAALRDVLARRKIENVVLVSAFLAAAALAHAVGSETN 127 Query 121 YEQIAVCVLEHESATVVMVDTHDGK-TQIAVKHVCRGLSGLTSWLTGMFGRDA---WRPA 176 Y Q A+ +E E+AT+ +VD+ DG T I + LT + + RP Sbjct 128 YAQTALLFIEPEAATLAVVDSADGSVTDIHRLSLSDDDDTAVGQLTELISQAESLPTRPD 187 Query 177 GVVVVGSDSEVSEFSWQLERVLPVPVFA 204 V +VGS ++ LE +PV A Sbjct 188 AVFLVGSGIDLPLIKPTLEASTTLPVTA 215 >gi|118462565|ref|YP_883949.1| hypothetical protein MAV_4824 [Mycobacterium avium 104] gi|118163852|gb|ABK64749.1| conserved hypothetical protein [Mycobacterium avium 104] gi|336460289|gb|EGO39191.1| hypothetical protein MAPs_42360 [Mycobacterium avium subsp. paratuberculosis S397] Length=482 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 71/238 (30%), Positives = 114/238 (48%), Gaps = 22/238 (9%) Query 1 LDTVLGLSITPTTLGWVLAEGHGADGAILDRNELELHSGRNAQAIHTAEQLAAEVLLAHE 60 +DTVLG+S+ PT + VL EG DGA +D + ++ + +A + ++Q+ + +L + Sbjct 1 MDTVLGVSMAPTAVRMVLVEGENGDGATVDEDNFDVATSEDAATVTASDQVLSAILGTRQ 60 Query 61 VAAAGDHRLRVIGVTWNAEASAQAALLVESLTGAGFDNVVPVRRLRAIETLAQAIAPVIG 120 AA G ++L GVT+ +AA L + L +NV+ V A LAQA+ Sbjct 61 GAAEGGYQLASTGVTFT--DPVEAAALRDKLAAHKVENVMLVSAFLAAAALAQAVGHRTN 118 Query 121 YEQIAVCVLEHESATVVMVDTHDGKT------------QIAVKHVCRGLSGLTSWLTGMF 168 Y A+ +E ++AT+ +VD+ DG + AV + +S + T Sbjct 119 YAHTALLYIEPDTATLAVVDSADGSIADVRRQPLPEDDEAAVAELASMVSNAENLET--- 175 Query 169 GRDAWRPAGVVVVGSDSEVSEFSWQLERVLPVPVFAQTMAQVTVARGAALAAAQSTEF 226 RP V VVGS ++ LE +P+ A +ARGAALA+A + F Sbjct 176 -----RPDAVFVVGSGIDIPLIKPALEAATTLPLTAPEEPDTALARGAALASAHAPLF 228 >gi|41409922|ref|NP_962758.1| hypothetical protein MAP3824 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41398755|gb|AAS06374.1| hypothetical protein MAP_3824 [Mycobacterium avium subsp. paratuberculosis K-10] Length=448 Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 71/238 (30%), Positives = 114/238 (48%), Gaps = 22/238 (9%) Query 1 LDTVLGLSITPTTLGWVLAEGHGADGAILDRNELELHSGRNAQAIHTAEQLAAEVLLAHE 60 +DTVLG+S+ PT + VL EG DGA +D + ++ + +A + ++Q+ + +L + Sbjct 1 MDTVLGVSMAPTAVRMVLVEGENGDGATVDEDNFDVATSEDAATVTASDQVLSAILGTRQ 60 Query 61 VAAAGDHRLRVIGVTWNAEASAQAALLVESLTGAGFDNVVPVRRLRAIETLAQAIAPVIG 120 AA G ++L GVT+ +AA L + L +NV+ V A LAQA+ Sbjct 61 GAAEGGYQLASTGVTFT--DPVEAAALRDKLAAHKVENVMLVSAFLAAAALAQAVGHRTN 118 Query 121 YEQIAVCVLEHESATVVMVDTHDGKT------------QIAVKHVCRGLSGLTSWLTGMF 168 Y A+ +E ++AT+ +VD+ DG + AV + +S + T Sbjct 119 YAHTALLYIEPDTATLAVVDSADGSIADVRRQPLPEDDEAAVAELASMVSNAENLET--- 175 Query 169 GRDAWRPAGVVVVGSDSEVSEFSWQLERVLPVPVFAQTMAQVTVARGAALAAAQSTEF 226 RP V VVGS ++ LE +P+ A +ARGAALA+A + F Sbjct 176 -----RPDAVFVVGSGIDIPLIKPALEAATTLPLTAPEEPDTALARGAALASAHAPLF 228 >gi|240172284|ref|ZP_04750943.1| hypothetical protein MkanA1_23416 [Mycobacterium kansasii ATCC 12478] Length=464 Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 68/216 (32%), Positives = 105/216 (49%), Gaps = 8/216 (3%) Query 16 WVLAEGHGADGAILDRNELELHSGRNAQAIHTAEQLAAEVLLAHEVAAAGDHRLRVIGVT 75 VL EG DGA++D+++ ++ +A I A+Q+ + +L E A G ++L GVT Sbjct 1 MVLVEGENGDGALVDQDQFDVSGDGDAATISAAQQVVSAILGTREGAYEGGYQLTSTGVT 60 Query 76 WNAEASAQAALLVESLTGAGFDNVVPVRRLRAIETLAQAIAPVIGYEQIAVCVLEHESAT 135 W AQAA L E+L + VV V A LAQA+ Y A+ +E E+AT Sbjct 61 W--RDPAQAAALREALANQKIEKVVLVSAFLAAAALAQAVGNETNYAHTALLFIEPETAT 118 Query 136 VVMVDTHDG-----KTQIAVKHVCRGLSGLTSWLTGMFGRDAWRPAGVVVVGSDSEVSEF 190 + +VD+ DG + Q+ ++ LT ++ + P + VVGS ++ Sbjct 119 LAVVDSADGSIADIQRQLLSDDDDTAVAQLTELVSAAESLET-HPDAIFVVGSGIDIPMI 177 Query 191 SWQLERVLPVPVFAQTMAQVTVARGAALAAAQSTEF 226 LE +PV A +ARGAALA+A + F Sbjct 178 KPALETATALPVTAAEEPDTALARGAALASANTPLF 213 >gi|41409919|ref|NP_962755.1| hypothetical protein MAP3821 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41398752|gb|AAS06371.1| hypothetical protein MAP_3821 [Mycobacterium avium subsp. paratuberculosis K-10] Length=690 Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 59/201 (30%), Positives = 106/201 (53%), Gaps = 9/201 (4%) Query 1 LDTVLGLSITPTTLGWVLAEGHGADGAILDRNELELHSGRNAQAIHTAEQLAAEVLLAHE 60 L+ VLG+S+ P+++ V+ EG ADGA ++ + +++ +A +++ + +L E Sbjct 6 LNIVLGVSMAPSSIQMVVLEGEYADGATVEEDAIDVTGADDAATASAPDRVISAILGTRE 65 Query 61 VAAAGDHRLRVIGVTWNAEASAQAALLVESLTGAGFDNVVPVRRLRAIETLAQAIAPVIG 120 AA +L IGVTW + A A ++L DNV+ V A LAQ + +G Sbjct 66 GAADAGLQLSSIGVTWTDQLEAAAL--RDALAARRIDNVMLVSAFLAAAALAQNVGGAMG 123 Query 121 YEQIAVCVLEHESATVVMVDTHDG------KTQIAVKHVCRGLSGLTSWLTGMFGRDAWR 174 YE+ AV ++E ++AT+ +V+T DG K QI + L++ + G+ ++ Sbjct 124 YERTAVLLVEPDTATLAVVETSDGSIPDVYKQQIRAESYGDAAGQLSAMVAGLEKLESL- 182 Query 175 PAGVVVVGSDSEVSEFSWQLE 195 P G+++VGS +V+ L+ Sbjct 183 PGGLLLVGSGVDVAPLKQVLQ 203 Lambda K H 0.315 0.128 0.376 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 734326436450 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40