BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv1890c
Length=203
Score E
Sequences producing significant alignments: (Bits) Value
gi|15609027|ref|NP_216406.1| hypothetical protein Rv1890c [Mycob... 407 6e-112
gi|340626899|ref|YP_004745351.1| hypothetical protein MCAN_19061... 399 1e-109
gi|308231971|ref|ZP_07414450.2| hypothetical protein TMAG_02068 ... 368 3e-100
gi|183982787|ref|YP_001851078.1| hypothetical protein MMAR_2781 ... 283 1e-74
gi|240170535|ref|ZP_04749194.1| hypothetical protein MkanA1_1457... 277 5e-73
gi|118618365|ref|YP_906697.1| hypothetical protein MUL_2966 [Myc... 271 6e-71
gi|296164909|ref|ZP_06847465.1| conserved hypothetical protein [... 266 9e-70
gi|41407710|ref|NP_960546.1| hypothetical protein MAP1612c [Myco... 264 5e-69
gi|336457549|gb|EGO36555.1| hypothetical protein MAPs_22210 [Myc... 263 1e-68
gi|254775293|ref|ZP_05216809.1| hypothetical protein MaviaA2_115... 263 1e-68
gi|118465817|ref|YP_882000.1| hypothetical protein MAV_2813 [Myc... 262 2e-68
gi|342859537|ref|ZP_08716190.1| hypothetical protein MCOL_11678 ... 251 4e-65
gi|254822525|ref|ZP_05227526.1| hypothetical protein MintA_21529... 245 3e-63
gi|120402178|ref|YP_952007.1| hypothetical protein Mvan_1166 [My... 227 7e-58
gi|145225740|ref|YP_001136418.1| hypothetical protein Mflv_5164 ... 197 5e-49
gi|315446092|ref|YP_004078971.1| hypothetical protein Mspyr1_458... 196 1e-48
gi|333990615|ref|YP_004523229.1| hypothetical protein JDM601_197... 185 4e-45
gi|118472794|ref|YP_884516.1| hypothetical protein MSMEG_0101 [M... 172 3e-41
gi|169630169|ref|YP_001703818.1| hypothetical protein MAB_3086 [... 157 7e-37
gi|262200319|ref|YP_003271527.1| YceI family protein [Gordonia b... 157 1e-36
gi|326381862|ref|ZP_08203555.1| YceI family protein [Gordonia ne... 149 2e-34
gi|343924962|ref|ZP_08764497.1| hypothetical protein GOALK_030_0... 141 5e-32
gi|296140291|ref|YP_003647534.1| hypothetical protein Tpau_2592 ... 132 4e-29
gi|296269610|ref|YP_003652242.1| YceI family protein [Thermobisp... 97.4 1e-18
gi|134100959|ref|YP_001106620.1| hypothetical protein SACE_4426 ... 87.8 8e-16
gi|297153531|gb|ADI03243.1| hypothetical protein SBI_00122 [Stre... 87.0 1e-15
gi|271970211|ref|YP_003344407.1| hypothetical protein Sros_9033 ... 86.7 2e-15
gi|291003426|ref|ZP_06561399.1| hypothetical protein SeryN2_0277... 85.1 6e-15
gi|345013358|ref|YP_004815712.1| YceI family protein [Streptomyc... 81.6 6e-14
gi|333920756|ref|YP_004494337.1| hypothetical protein AS9A_3092 ... 73.9 1e-11
gi|262193415|ref|YP_003264624.1| YceI family protein [Haliangium... 66.2 3e-09
gi|295132412|ref|YP_003583088.1| hypothetical protein ZPR_0535 [... 62.0 4e-08
gi|91200797|emb|CAJ73850.1| hypothetical protein kuste3094 [Cand... 61.6 6e-08
gi|255535620|ref|YP_003095991.1| hypothetical protein FIC_01481 ... 52.0 5e-05
gi|304393782|ref|ZP_07375707.1| cytochrome B561 [Ahrensia sp. R2... 50.8 1e-04
gi|268316003|ref|YP_003289722.1| YceI family protein [Rhodotherm... 50.8 1e-04
gi|226226082|ref|YP_002760188.1| hypothetical protein GAU_0676 [... 50.8 1e-04
gi|187920534|ref|YP_001889566.1| YceI family protein [Burkholder... 49.7 2e-04
gi|345302306|ref|YP_004824208.1| YceI family protein [Rhodotherm... 49.7 3e-04
gi|90415713|ref|ZP_01223647.1| hypothetical protein GB2207_10356... 49.3 4e-04
gi|116626206|ref|YP_828362.1| YceI family protein [Candidatus So... 48.9 5e-04
gi|186473009|ref|YP_001860351.1| YceI family protein [Burkholder... 48.5 5e-04
gi|149279082|ref|ZP_01885215.1| hypothetical protein PBAL39_0728... 48.1 6e-04
gi|91778064|ref|YP_553272.1| hypothetical protein Bxe_B2065 [Bur... 47.8 9e-04
gi|134095860|ref|YP_001100935.1| hypothetical protein HEAR2692 [... 47.8 9e-04
gi|116622932|ref|YP_825088.1| hypothetical protein Acid_3834 [Ca... 47.8 0.001
gi|327402615|ref|YP_004343453.1| YceI family protein [Fluviicola... 47.8 0.001
gi|220913834|ref|YP_002489143.1| YceI family protein [Arthrobact... 47.4 0.001
gi|295675558|ref|YP_003604082.1| YceI family protein [Burkholder... 47.4 0.001
gi|313903233|ref|ZP_07836626.1| YceI family protein [Thermaeroba... 47.0 0.002
>gi|15609027|ref|NP_216406.1| hypothetical protein Rv1890c [Mycobacterium tuberculosis H37Rv]
gi|15841360|ref|NP_336397.1| hypothetical protein MT1940 [Mycobacterium tuberculosis CDC1551]
gi|31793082|ref|NP_855575.1| hypothetical protein Mb1923c [Mycobacterium bovis AF2122/97]
51 more sequence titles
Length=203
Score = 407 bits (1045), Expect = 6e-112, Method: Compositional matrix adjust.
Identities = 202/203 (99%), Positives = 203/203 (100%), Gaps = 0/203 (0%)
Query 1 VAHKTRREGRAGRSSEYSRGVSDAVWTLDASDGELVLRTGVVGRAARLGHRLTIAMTRWQ 60
+AHKTRREGRAGRSSEYSRGVSDAVWTLDASDGELVLRTGVVGRAARLGHRLTIAMTRWQ
Sbjct 1 MAHKTRREGRAGRSSEYSRGVSDAVWTLDASDGELVLRTGVVGRAARLGHRLTIAMTRWQ 60
Query 61 ALVNWSGTDPVAGELVAEVDSFEVMRGEGGVKGLSEPEKALVRANALKTLNASRFPHIRF 120
ALVNWSGTDPVAGELVAEVDSFEVMRGEGGVKGLSEPEKALVRANALKTLNASRFPHIRF
Sbjct 61 ALVNWSGTDPVAGELVAEVDSFEVMRGEGGVKGLSEPEKALVRANALKTLNASRFPHIRF 120
Query 121 TTEAIAQTGNGYRLTGKLHIRGKSREHVIDLHTEDLGAAWRISADTTVRQSNYGVKPYSL 180
TTEAIAQTGNGYRLTGKLHIRGKSREHVIDLHTEDLGAAWRISADTTVRQSNYGVKPYSL
Sbjct 121 TTEAIAQTGNGYRLTGKLHIRGKSREHVIDLHTEDLGAAWRISADTTVRQSNYGVKPYSL 180
Query 181 LMGSIRVADEVSVAFTAVRAKDD 203
LMGSIRVADEVSVAFTAVRAKDD
Sbjct 181 LMGSIRVADEVSVAFTAVRAKDD 203
>gi|340626899|ref|YP_004745351.1| hypothetical protein MCAN_19061 [Mycobacterium canettii CIPT
140010059]
gi|340005089|emb|CCC44238.1| hypothetical protein MCAN_19061 [Mycobacterium canettii CIPT
140010059]
Length=203
Score = 399 bits (1025), Expect = 1e-109, Method: Compositional matrix adjust.
Identities = 198/203 (98%), Positives = 200/203 (99%), Gaps = 0/203 (0%)
Query 1 VAHKTRREGRAGRSSEYSRGVSDAVWTLDASDGELVLRTGVVGRAARLGHRLTIAMTRWQ 60
+AHKTRREGRAGRSSEYSR VSD VWTLDASDGELVLRTGVVGRAARLGHRLTIAMTRWQ
Sbjct 1 MAHKTRREGRAGRSSEYSRSVSDEVWTLDASDGELVLRTGVVGRAARLGHRLTIAMTRWQ 60
Query 61 ALVNWSGTDPVAGELVAEVDSFEVMRGEGGVKGLSEPEKALVRANALKTLNASRFPHIRF 120
ALVNWSGTDPVA EL+AEVDSFEVMRGEGGVKGLSEPEKALVRANALKTLNASRFPHIRF
Sbjct 61 ALVNWSGTDPVAVELMAEVDSFEVMRGEGGVKGLSEPEKALVRANALKTLNASRFPHIRF 120
Query 121 TTEAIAQTGNGYRLTGKLHIRGKSREHVIDLHTEDLGAAWRISADTTVRQSNYGVKPYSL 180
TTEAIAQTGNGYRLTGKLHIRGKSREHVIDLHTEDLGAAWRISADTTVRQSNYGVKPYSL
Sbjct 121 TTEAIAQTGNGYRLTGKLHIRGKSREHVIDLHTEDLGAAWRISADTTVRQSNYGVKPYSL 180
Query 181 LMGSIRVADEVSVAFTAVRAKDD 203
LMGSIRVADEVSVAFTAVRAKDD
Sbjct 181 LMGSIRVADEVSVAFTAVRAKDD 203
>gi|308231971|ref|ZP_07414450.2| hypothetical protein TMAG_02068 [Mycobacterium tuberculosis SUMu001]
gi|308369551|ref|ZP_07418232.2| hypothetical protein TMBG_00423 [Mycobacterium tuberculosis SUMu002]
gi|308370851|ref|ZP_07422958.2| hypothetical protein TMCG_02930 [Mycobacterium tuberculosis SUMu003]
24 more sequence titles
Length=183
Score = 368 bits (945), Expect = 3e-100, Method: Compositional matrix adjust.
Identities = 182/183 (99%), Positives = 183/183 (100%), Gaps = 0/183 (0%)
Query 21 VSDAVWTLDASDGELVLRTGVVGRAARLGHRLTIAMTRWQALVNWSGTDPVAGELVAEVD 80
+SDAVWTLDASDGELVLRTGVVGRAARLGHRLTIAMTRWQALVNWSGTDPVAGELVAEVD
Sbjct 1 MSDAVWTLDASDGELVLRTGVVGRAARLGHRLTIAMTRWQALVNWSGTDPVAGELVAEVD 60
Query 81 SFEVMRGEGGVKGLSEPEKALVRANALKTLNASRFPHIRFTTEAIAQTGNGYRLTGKLHI 140
SFEVMRGEGGVKGLSEPEKALVRANALKTLNASRFPHIRFTTEAIAQTGNGYRLTGKLHI
Sbjct 61 SFEVMRGEGGVKGLSEPEKALVRANALKTLNASRFPHIRFTTEAIAQTGNGYRLTGKLHI 120
Query 141 RGKSREHVIDLHTEDLGAAWRISADTTVRQSNYGVKPYSLLMGSIRVADEVSVAFTAVRA 200
RGKSREHVIDLHTEDLGAAWRISADTTVRQSNYGVKPYSLLMGSIRVADEVSVAFTAVRA
Sbjct 121 RGKSREHVIDLHTEDLGAAWRISADTTVRQSNYGVKPYSLLMGSIRVADEVSVAFTAVRA 180
Query 201 KDD 203
KDD
Sbjct 181 KDD 183
>gi|183982787|ref|YP_001851078.1| hypothetical protein MMAR_2781 [Mycobacterium marinum M]
gi|183176113|gb|ACC41223.1| conserved hypothetical protein [Mycobacterium marinum M]
Length=194
Score = 283 bits (724), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 134/190 (71%), Positives = 160/190 (85%), Gaps = 0/190 (0%)
Query 13 RSSEYSRGVSDAVWTLDASDGELVLRTGVVGRAARLGHRLTIAMTRWQALVNWSGTDPVA 72
R SEYSR VS+AVWTLDASDGEL + TGV GRAA++GHRLTIAMTRWQA VNW +P A
Sbjct 4 RPSEYSRVVSEAVWTLDASDGELFIGTGVAGRAAKMGHRLTIAMTRWQATVNWVADEPSA 63
Query 73 GELVAEVDSFEVMRGEGGVKGLSEPEKALVRANALKTLNASRFPHIRFTTEAIAQTGNGY 132
EL+ EVDS EV+RGEGGVKGLS PEK LVR+NALK+L A RFP I F +AI +T +GY
Sbjct 64 AELIVEVDSLEVLRGEGGVKGLSGPEKVLVRSNALKSLRADRFPRIEFAADAIEKTADGY 123
Query 133 RLTGKLHIRGKSREHVIDLHTEDLGAAWRISADTTVRQSNYGVKPYSLLMGSIRVADEVS 192
RL+G LHI G S +HVIDLHT+DLG +WR+S +T VRQS+YGVKPYSLLMGS++VADEV+
Sbjct 124 RLSGALHIHGTSHQHVIDLHTDDLGDSWRMSTETAVRQSDYGVKPYSLLMGSLQVADEVT 183
Query 193 VAFTAVRAKD 202
++F+AVRAK+
Sbjct 184 ISFSAVRAKN 193
>gi|240170535|ref|ZP_04749194.1| hypothetical protein MkanA1_14575 [Mycobacterium kansasii ATCC
12478]
Length=183
Score = 277 bits (709), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 132/182 (73%), Positives = 154/182 (85%), Gaps = 0/182 (0%)
Query 21 VSDAVWTLDASDGELVLRTGVVGRAARLGHRLTIAMTRWQALVNWSGTDPVAGELVAEVD 80
+SD VWTLD S GEL++RTGV GRAAR+GHRLTIAMTRWQA VNW +P EL EVD
Sbjct 1 MSDTVWTLDPSGGELIVRTGVAGRAARMGHRLTIAMTRWQATVNWVADEPATAELAVEVD 60
Query 81 SFEVMRGEGGVKGLSEPEKALVRANALKTLNASRFPHIRFTTEAIAQTGNGYRLTGKLHI 140
S EV+RGEGGVK LS PEKALVR+NALK+LNA RFP IRFT I +T +GYRLTG+L I
Sbjct 61 SLEVLRGEGGVKSLSGPEKALVRSNALKSLNAGRFPDIRFTASEIDKTEDGYRLTGQLQI 120
Query 141 RGKSREHVIDLHTEDLGAAWRISADTTVRQSNYGVKPYSLLMGSIRVADEVSVAFTAVRA 200
RGKSR+H+IDL TEDLG +W +SA++TVRQS+YGVKPYSLLMGS++VADEV+V+FTAVR
Sbjct 121 RGKSRQHMIDLRTEDLGDSWAMSAESTVRQSDYGVKPYSLLMGSLQVADEVTVSFTAVRP 180
Query 201 KD 202
KD
Sbjct 181 KD 182
>gi|118618365|ref|YP_906697.1| hypothetical protein MUL_2966 [Mycobacterium ulcerans Agy99]
gi|118570475|gb|ABL05226.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99]
Length=183
Score = 271 bits (692), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 126/182 (70%), Positives = 155/182 (86%), Gaps = 0/182 (0%)
Query 21 VSDAVWTLDASDGELVLRTGVVGRAARLGHRLTIAMTRWQALVNWSGTDPVAGELVAEVD 80
+S+AVWTLDASDGEL++ TGV GRAA++GHRLTIAMTRWQA VNW +P A EL+ EVD
Sbjct 1 MSEAVWTLDASDGELLIGTGVAGRAAKMGHRLTIAMTRWQATVNWVADEPSAAELIVEVD 60
Query 81 SFEVMRGEGGVKGLSEPEKALVRANALKTLNASRFPHIRFTTEAIAQTGNGYRLTGKLHI 140
S EV+RGEGGVKGLS PEK LVR+NALK+L A RFP I F+ +AI +T +GYRL+G LHI
Sbjct 61 SLEVLRGEGGVKGLSGPEKVLVRSNALKSLRADRFPRIEFSADAIEKTADGYRLSGALHI 120
Query 141 RGKSREHVIDLHTEDLGAAWRISADTTVRQSNYGVKPYSLLMGSIRVADEVSVAFTAVRA 200
G S +HVIDLHT+DLG +WR+S +T VRQS+YGVKPY LLMGS++VADEV+++F+AVRA
Sbjct 121 HGTSHQHVIDLHTDDLGDSWRMSTETAVRQSDYGVKPYLLLMGSLQVADEVTISFSAVRA 180
Query 201 KD 202
K+
Sbjct 181 KN 182
>gi|296164909|ref|ZP_06847465.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295899751|gb|EFG79201.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=182
Score = 266 bits (681), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 125/177 (71%), Positives = 152/177 (86%), Gaps = 0/177 (0%)
Query 26 WTLDASDGELVLRTGVVGRAARLGHRLTIAMTRWQALVNWSGTDPVAGELVAEVDSFEVM 85
W+L A+DGEL L TGV GRAA++GHRLTIAMTRW A V+W+G++P ELV E DSFEV+
Sbjct 5 WSLGAADGELCLATGVRGRAAKMGHRLTIAMTRWHATVSWAGSEPATVELVVETDSFEVL 64
Query 86 RGEGGVKGLSEPEKALVRANALKTLNASRFPHIRFTTEAIAQTGNGYRLTGKLHIRGKSR 145
RGEGGVKGLS PEKALVR+NALK+L+A RFP IRF+T AI + G+GYRLTG+L +RGKSR
Sbjct 65 RGEGGVKGLSGPEKALVRSNALKSLDAGRFPEIRFSTRAIEKAGDGYRLTGRLEVRGKSR 124
Query 146 EHVIDLHTEDLGAAWRISADTTVRQSNYGVKPYSLLMGSIRVADEVSVAFTAVRAKD 202
+HVIDL TEDLG AWR+S ++TVRQ++YG+KPYSLLMGS++VAD+VSV FTA KD
Sbjct 125 DHVIDLRTEDLGDAWRMSTESTVRQTDYGIKPYSLLMGSVQVADDVSVTFTATHRKD 181
>gi|41407710|ref|NP_960546.1| hypothetical protein MAP1612c [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41396063|gb|AAS03929.1| hypothetical protein MAP_1612c [Mycobacterium avium subsp. paratuberculosis
K-10]
Length=188
Score = 264 bits (675), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 127/181 (71%), Positives = 153/181 (85%), Gaps = 0/181 (0%)
Query 22 SDAVWTLDASDGELVLRTGVVGRAARLGHRLTIAMTRWQALVNWSGTDPVAGELVAEVDS 81
SD T+ +DGEL+L TGV GRAAR+GHRLTIAMTRW+A V+W+G+ PV EL EVDS
Sbjct 3 SDNASTIGPADGELLLHTGVTGRAARMGHRLTIAMTRWRAGVSWAGSRPVRAELAVEVDS 62
Query 82 FEVMRGEGGVKGLSEPEKALVRANALKTLNASRFPHIRFTTEAIAQTGNGYRLTGKLHIR 141
FEV+RGEGGVKGLS EKALVR+NALK+LNASRFP IR+T++ I TG+GYRLTG L IR
Sbjct 63 FEVLRGEGGVKGLSTAEKALVRSNALKSLNASRFPEIRYTSDVIEHTGDGYRLTGTLQIR 122
Query 142 GKSREHVIDLHTEDLGAAWRISADTTVRQSNYGVKPYSLLMGSIRVADEVSVAFTAVRAK 201
G +R HVIDL EDLG AWR+S +TTVRQS+YG+KP+SLLMGS++VAD+VS++FTAV AK
Sbjct 123 GAARNHVIDLGAEDLGEAWRLSVETTVRQSDYGIKPFSLLMGSVQVADDVSLSFTAVHAK 182
Query 202 D 202
D
Sbjct 183 D 183
>gi|336457549|gb|EGO36555.1| hypothetical protein MAPs_22210 [Mycobacterium avium subsp. paratuberculosis
S397]
Length=188
Score = 263 bits (671), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 126/181 (70%), Positives = 153/181 (85%), Gaps = 0/181 (0%)
Query 22 SDAVWTLDASDGELVLRTGVVGRAARLGHRLTIAMTRWQALVNWSGTDPVAGELVAEVDS 81
SD T+ +DGEL+L TGV GRAAR+GHRLTIAMTRW+A V+W+G+ PV EL EVDS
Sbjct 3 SDNASTIGPADGELLLHTGVTGRAARMGHRLTIAMTRWRAGVSWAGSRPVRAELAVEVDS 62
Query 82 FEVMRGEGGVKGLSEPEKALVRANALKTLNASRFPHIRFTTEAIAQTGNGYRLTGKLHIR 141
FEV+RGEGGVKGLS EKALVR+NALK+LNASRFP IR+T++ I TG+GYRLTG L I+
Sbjct 63 FEVLRGEGGVKGLSTAEKALVRSNALKSLNASRFPEIRYTSDVIEHTGDGYRLTGTLQIQ 122
Query 142 GKSREHVIDLHTEDLGAAWRISADTTVRQSNYGVKPYSLLMGSIRVADEVSVAFTAVRAK 201
G +R HVIDL EDLG AWR+S +TTVRQS+YG+KP+SLLMGS++VAD+VS++FTAV AK
Sbjct 123 GAARNHVIDLGAEDLGEAWRLSVETTVRQSDYGIKPFSLLMGSVQVADDVSLSFTAVHAK 182
Query 202 D 202
D
Sbjct 183 D 183
>gi|254775293|ref|ZP_05216809.1| hypothetical protein MaviaA2_11566 [Mycobacterium avium subsp.
avium ATCC 25291]
Length=188
Score = 263 bits (671), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 125/181 (70%), Positives = 152/181 (84%), Gaps = 0/181 (0%)
Query 22 SDAVWTLDASDGELVLRTGVVGRAARLGHRLTIAMTRWQALVNWSGTDPVAGELVAEVDS 81
SD WT+ +DGEL+L TGV GRAAR+GHRLTIAMTRW+ V+W+G+ PV EL EVDS
Sbjct 3 SDNAWTIGPADGELLLHTGVTGRAARMGHRLTIAMTRWRGGVSWAGSRPVRAELAVEVDS 62
Query 82 FEVMRGEGGVKGLSEPEKALVRANALKTLNASRFPHIRFTTEAIAQTGNGYRLTGKLHIR 141
EV+RGEGGVKGLS EKALVR+NALK+LNASRFP IR+T++ I G+GYRLTG L IR
Sbjct 63 VEVLRGEGGVKGLSTAEKALVRSNALKSLNASRFPEIRYTSDVIEHAGDGYRLTGTLQIR 122
Query 142 GKSREHVIDLHTEDLGAAWRISADTTVRQSNYGVKPYSLLMGSIRVADEVSVAFTAVRAK 201
G +R HVI+L TEDLG AWR+S +TTVRQS+YG+KP+SLLMGS++VAD+VS++FTAV AK
Sbjct 123 GAARNHVINLRTEDLGEAWRLSVETTVRQSDYGIKPFSLLMGSVQVADDVSLSFTAVHAK 182
Query 202 D 202
D
Sbjct 183 D 183
>gi|118465817|ref|YP_882000.1| hypothetical protein MAV_2813 [Mycobacterium avium 104]
gi|118167104|gb|ABK68001.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=188
Score = 262 bits (670), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 126/181 (70%), Positives = 151/181 (84%), Gaps = 0/181 (0%)
Query 22 SDAVWTLDASDGELVLRTGVVGRAARLGHRLTIAMTRWQALVNWSGTDPVAGELVAEVDS 81
SD WT+ +DGEL+L TGV GRAAR+GHRLTIAMTRW+ V W+G+ PV EL EVDS
Sbjct 3 SDDAWTIGPADGELLLHTGVTGRAARMGHRLTIAMTRWRGGVGWAGSRPVRAELAVEVDS 62
Query 82 FEVMRGEGGVKGLSEPEKALVRANALKTLNASRFPHIRFTTEAIAQTGNGYRLTGKLHIR 141
EV+RGEGGVKGLS EKALVR+NALK+LNASRFP IR+T++ I TG+GYRLTG L IR
Sbjct 63 VEVLRGEGGVKGLSTAEKALVRSNALKSLNASRFPEIRYTSDVIEHTGDGYRLTGTLQIR 122
Query 142 GKSREHVIDLHTEDLGAAWRISADTTVRQSNYGVKPYSLLMGSIRVADEVSVAFTAVRAK 201
G +R VIDL TEDLG AWR+S +TTVRQS+YG+KP+SLLMGS++VAD+VS++FTAV AK
Sbjct 123 GTARNRVIDLRTEDLGEAWRLSVETTVRQSDYGIKPFSLLMGSVQVADDVSLSFTAVHAK 182
Query 202 D 202
D
Sbjct 183 D 183
>gi|342859537|ref|ZP_08716190.1| hypothetical protein MCOL_11678 [Mycobacterium colombiense CECT
3035]
gi|342132669|gb|EGT85889.1| hypothetical protein MCOL_11678 [Mycobacterium colombiense CECT
3035]
Length=186
Score = 251 bits (641), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 117/180 (65%), Positives = 150/180 (84%), Gaps = 0/180 (0%)
Query 23 DAVWTLDASDGELVLRTGVVGRAARLGHRLTIAMTRWQALVNWSGTDPVAGELVAEVDSF 82
++VWT+ +DGEL+L TGV GRAAR+GHRLT+AMTRW+A V+W+G+ PV+ +L E DSF
Sbjct 6 NSVWTIGPTDGELLLHTGVAGRAARMGHRLTVAMTRWRATVSWAGSRPVSAQLAVETDSF 65
Query 83 EVMRGEGGVKGLSEPEKALVRANALKTLNASRFPHIRFTTEAIAQTGNGYRLTGKLHIRG 142
EV+RG+GGVKGLS EKALVR NALK+L+ASRFP IR+T + I + GY LTG L IRG
Sbjct 66 EVLRGDGGVKGLSGAEKALVRTNALKSLSASRFPEIRYTADVIDEADGGYHLTGTLDIRG 125
Query 143 KSREHVIDLHTEDLGAAWRISADTTVRQSNYGVKPYSLLMGSIRVADEVSVAFTAVRAKD 202
KSR HVID+ TEDLG +WR+S ++ VRQS+YG+KPYSLLMGS++VADEVS+ F+AV A++
Sbjct 126 KSRGHVIDVRTEDLGDSWRMSVESAVRQSDYGIKPYSLLMGSVQVADEVSLTFSAVHARN 185
>gi|254822525|ref|ZP_05227526.1| hypothetical protein MintA_21529 [Mycobacterium intracellulare
ATCC 13950]
Length=186
Score = 245 bits (626), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 115/179 (65%), Positives = 144/179 (81%), Gaps = 0/179 (0%)
Query 24 AVWTLDASDGELVLRTGVVGRAARLGHRLTIAMTRWQALVNWSGTDPVAGELVAEVDSFE 83
A WT+ DGEL+L TGV GRAAR+GHRLTI M+RW+A VNW+G+ PV+ EL +V SF
Sbjct 7 ATWTIGPPDGELLLHTGVAGRAARMGHRLTIVMSRWRATVNWAGSRPVSAELAVDVGSFA 66
Query 84 VMRGEGGVKGLSEPEKALVRANALKTLNASRFPHIRFTTEAIAQTGNGYRLTGKLHIRGK 143
V+ EGG+KGLS EKA VR+NALK+L+A RFP IR++ + I + G+GYRLTG L I G
Sbjct 67 VVNAEGGIKGLSATEKAQVRSNALKSLDAKRFPEIRYSADVIERAGDGYRLTGTLEIHGT 126
Query 144 SREHVIDLHTEDLGAAWRISADTTVRQSNYGVKPYSLLMGSIRVADEVSVAFTAVRAKD 202
SR+HV+D+ TEDLG AWRIS +T VRQ++YGVKPYSLLMGS++VAD+VS+ FTAV AKD
Sbjct 127 SRDHVVDVRTEDLGNAWRISGETAVRQTDYGVKPYSLLMGSVQVADDVSLTFTAVHAKD 185
>gi|120402178|ref|YP_952007.1| hypothetical protein Mvan_1166 [Mycobacterium vanbaalenii PYR-1]
gi|119954996|gb|ABM12001.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1]
Length=179
Score = 227 bits (579), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 110/181 (61%), Positives = 142/181 (79%), Gaps = 2/181 (1%)
Query 21 VSDAVWTLDASDGELVLRTGVVGRAARLGHRLTIAMTRWQALVNWSGTDPVAGELVAEVD 80
++D VWTLD+SDG L + TGV G AA +GHRLTIAM WQA V W+ +PV+ EL +V
Sbjct 1 MADTVWTLDSSDGALTVTTGVAGPAAAMGHRLTIAMA-WQATVRWA-DEPVSMELTVDVG 58
Query 81 SFEVMRGEGGVKGLSEPEKALVRANALKTLNASRFPHIRFTTEAIAQTGNGYRLTGKLHI 140
S EV+RGEGGVKGL+ PEKAL R+NALKTL A RFPHI F ++ IA+T +GYRLTG L +
Sbjct 59 SLEVLRGEGGVKGLTGPEKALARSNALKTLEAKRFPHIIFRSDRIAKTDDGYRLTGTLEV 118
Query 141 RGKSREHVIDLHTEDLGAAWRISADTTVRQSNYGVKPYSLLMGSIRVADEVSVAFTAVRA 200
GK+RE V+DL +DLG +WR+S + VR S++GVKPYS++MG+++V DEV+VAF+A RA
Sbjct 119 HGKAREQVVDLRVDDLGDSWRMSCEAVVRHSDFGVKPYSMMMGAMKVDDEVTVAFSAERA 178
Query 201 K 201
K
Sbjct 179 K 179
>gi|145225740|ref|YP_001136418.1| hypothetical protein Mflv_5164 [Mycobacterium gilvum PYR-GCK]
gi|145218226|gb|ABP47630.1| conserved hypothetical protein [Mycobacterium gilvum PYR-GCK]
Length=178
Score = 197 bits (502), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 96/172 (56%), Positives = 127/172 (74%), Gaps = 1/172 (0%)
Query 26 WTLDASDGELVLRTGVVGRAARLGHRLTIAMTRWQALVNWSGTDPVAGELVAEVDSFEVM 85
W LD SDGEL+L TGV G AA++GHRLTIA+ +W+A V W G PV+ E+ +V S EV+
Sbjct 4 WELDPSDGELLLTTGVTGPAAKMGHRLTIAV-QWRATVEWDGDRPVSVEMTVDVGSLEVL 62
Query 86 RGEGGVKGLSEPEKALVRANALKTLNASRFPHIRFTTEAIAQTGNGYRLTGKLHIRGKSR 145
GEGGV GLS PEKAL RANALKTL A RFP I F T +I T +GY L G L + G+SR
Sbjct 63 GGEGGVTGLSGPEKALARANALKTLQAKRFPQIVFRTSSIEPTDHGYLLHGTLDLHGRSR 122
Query 146 EHVIDLHTEDLGAAWRISADTTVRQSNYGVKPYSLLMGSIRVADEVSVAFTA 197
+ V+++ EDLG W++ TV +++G+KPYS++MG+++VADEV+V+FTA
Sbjct 123 DRVLEVEVEDLGEQWQMGCRATVSHADHGLKPYSMMMGAMKVADEVAVSFTA 174
>gi|315446092|ref|YP_004078971.1| hypothetical protein Mspyr1_45850 [Mycobacterium sp. Spyr1]
gi|315264395|gb|ADU01137.1| uncharacterized conserved protein [Mycobacterium sp. Spyr1]
Length=178
Score = 196 bits (499), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 95/176 (54%), Positives = 128/176 (73%), Gaps = 1/176 (0%)
Query 26 WTLDASDGELVLRTGVVGRAARLGHRLTIAMTRWQALVNWSGTDPVAGELVAEVDSFEVM 85
W LD SDGEL+L TGV G AA++GHRLTIA+ +W+A V W G PV+ E+ +V S EV+
Sbjct 4 WELDPSDGELLLTTGVTGPAAKMGHRLTIAV-QWRATVQWDGDRPVSVEMTVDVGSLEVL 62
Query 86 RGEGGVKGLSEPEKALVRANALKTLNASRFPHIRFTTEAIAQTGNGYRLTGKLHIRGKSR 145
GEGGV GLS PEKAL RANALKTL A RFP I F T +I +GY L G L + G+SR
Sbjct 63 GGEGGVTGLSGPEKALARANALKTLQAKRFPQIVFRTSSIEPADHGYLLHGTLDLHGRSR 122
Query 146 EHVIDLHTEDLGAAWRISADTTVRQSNYGVKPYSLLMGSIRVADEVSVAFTAVRAK 201
+ V+++ EDLG W+++ +V +++G+KPYS++MG+++VADEV+V+FTA K
Sbjct 123 DRVLEVEVEDLGEQWQMACRASVSHADHGLKPYSMMMGAMKVADEVAVSFTARHPK 178
>gi|333990615|ref|YP_004523229.1| hypothetical protein JDM601_1975 [Mycobacterium sp. JDM601]
gi|333486583|gb|AEF35975.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=192
Score = 185 bits (469), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 90/182 (50%), Positives = 124/182 (69%), Gaps = 6/182 (3%)
Query 28 LDASDGELVLRTGVVGRAARLGHRLTIAMTRWQALVNWSGTDPVAGELVAEVDSFEVMRG 87
DAS G L + TGV GRAA++GHRLTIAM RWQA+V+WSG P A L E DS V+ G
Sbjct 7 FDASHGRLQVGTGVAGRAAKMGHRLTIAMERWQAVVSWSGEQPTAVTLTVEADSLRVLGG 66
Query 88 EGGVKGLSEPEKALVRANALKTLNASRFPHIRFTTEAIAQTGNGYRLTGKLHIRGKSREH 147
EGG+ L+ PEKAL+R NA L A ++ IRF + I +GYRLTG L IRG+++ H
Sbjct 67 EGGMTPLTGPEKALIRTNARNCLGADKYRRIRFESSEIEANDDGYRLTGSLEIRGRTKPH 126
Query 148 VIDLHTEDLGA------AWRISADTTVRQSNYGVKPYSLLMGSIRVADEVSVAFTAVRAK 201
V+ + +LG +WR+ +T VR S++GV+ YS+LMG+++VADEV+V+F+A +
Sbjct 127 VVAVQVSELGPPHQHRDSWRVDGETVVRHSDFGVRRYSMLMGAMQVADEVTVSFSATVSA 186
Query 202 DD 203
D+
Sbjct 187 DE 188
>gi|118472794|ref|YP_884516.1| hypothetical protein MSMEG_0101 [Mycobacterium smegmatis str.
MC2 155]
gi|118174081|gb|ABK74977.1| conserved hypothetical protein [Mycobacterium smegmatis str.
MC2 155]
Length=184
Score = 172 bits (435), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 90/179 (51%), Positives = 119/179 (67%), Gaps = 8/179 (4%)
Query 23 DAVWTLDASDGELVLRTGVVGRAARLGHRLTIAMTRWQALVNW----SGTDPVAGELVAE 78
+A WTL ASDGEL+L TGV G AAR+GHRLTIAM W+A V W +G +PV EL +
Sbjct 4 NATWTLSASDGELLLHTGVTGTAARVGHRLTIAMRSWEATVFWEGDGAGAEPVKAELTID 63
Query 79 VDSFEVMRGEGGVKGLSEPEKALVRANALKTLNASRFPHIRFTTEAIAQTGNGYRLTGKL 138
+DS EV+ EGG+ LS EK L+R NALK L A RFP RF + I + G+ R+ G
Sbjct 64 IDSLEVVGSEGGMTPLSGAEKTLIRNNALKLLRARRFPQARFVSSDIERDGDIVRMHGAF 123
Query 139 HIRGKSREHVIDLHTEDLGAAWRISADTTVRQSNYGVKPYSLLMGSIRVADEVSVAFTA 197
+ GK R+HV+++ +D IS T VR S+YG+K YS+L+G+++VAD+V V FTA
Sbjct 124 ELFGKVRDHVLEVRIDD----GVISGQTVVRHSDYGIKQYSMLIGAMKVADDVRVTFTA 178
>gi|169630169|ref|YP_001703818.1| hypothetical protein MAB_3086 [Mycobacterium abscessus ATCC 19977]
gi|169242136|emb|CAM63164.1| Conserved hypothetical protein [Mycobacterium abscessus]
Length=177
Score = 157 bits (398), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 85/170 (50%), Positives = 105/170 (62%), Gaps = 3/170 (1%)
Query 26 WTLDASDGELVLRTGVVGRAARLGHRLTIAMTRWQALVNWSGTDPVAGELVAEVDSFEVM 85
WTL +G L L TGV G AAR+GHRLTI M W V+ P A LV +VDS V
Sbjct 4 WTLGPENGTLTLHTGVTGAAARMGHRLTIVMDAWTISVDGPDDQPSAVSLVVDVDSLRVE 63
Query 86 RGEGGVKGLSEPEKALVRANALKTLNASRFPHIRFTTEAIAQTGNGYRLTGKLHIRGKSR 145
GEGG+ L+ PEK +VR+NALKTLNA RFP I F E I +T GY + G L I G +R
Sbjct 64 SGEGGLTPLTGPEKTIVRSNALKTLNAQRFPTIEFHAEQIGKTAAGYVMRGALTIHGATR 123
Query 146 EHVIDLHTEDLGAAWRISADTTVRQSNYGVKPYSLLMGSIRVADEVSVAF 195
I+L GA +S T V Q YG+KP+S+ MGS++VAD V+V+F
Sbjct 124 AVDIELSVAADGA---LSLSTDVSQRAYGIKPFSMAMGSLKVADAVTVSF 170
>gi|262200319|ref|YP_003271527.1| YceI family protein [Gordonia bronchialis DSM 43247]
gi|262083666|gb|ACY19634.1| YceI family protein [Gordonia bronchialis DSM 43247]
Length=190
Score = 157 bits (396), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 79/176 (45%), Positives = 110/176 (63%), Gaps = 4/176 (2%)
Query 24 AVWTLDASDGELVLRTGVVGRAARLGHRLTIAMTRWQALVNWSGTDPVAGELVAEVDSFE 83
+V T A DGEL++ TGV G AAR GHRLTIA+ W A V P A VDS +
Sbjct 2 SVETFTADDGELLIHTGVTGPAARTGHRLTIAVRAWTATVTVDDGTPTAVAATIVVDSLD 61
Query 84 VMRGEGGVKGLSEPEKALVRANALKTLNASRFPHIRFTTEAIAQTGNGYRLTGKLHIRGK 143
V G GG+ ++ PE+A+ R+NALK+L A +FP I F +A++ GYRLTG L I G
Sbjct 62 VTAGTGGLTPMTGPERAMARSNALKSLKAKKFPEITFAASDVAESAGGYRLTGMLTIAGT 121
Query 144 SREHVIDLHTEDLGAAWRISADTTVRQSNYGVKPYSLLMGSIRVADEVSVAFTAVR 199
+RE ++D+ T++ ++ D + QS++GVKPYSL MG+++VADEV + R
Sbjct 122 TREQIVDIATDE----SHLTFDVALTQSDFGVKPYSLAMGTLKVADEVRLTLDVTR 173
>gi|326381862|ref|ZP_08203555.1| YceI family protein [Gordonia neofelifaecis NRRL B-59395]
gi|326199288|gb|EGD56469.1| YceI family protein [Gordonia neofelifaecis NRRL B-59395]
Length=176
Score = 149 bits (377), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 75/170 (45%), Positives = 107/170 (63%), Gaps = 4/170 (2%)
Query 32 DGELVLRTGVVGRAARLGHRLTIAMTRWQALVNWSGTDPVAGELVAEVDSFEVMRGEGGV 91
DGEL LRTGV GRAAR GH LTI W V + PVA L +V+S +V GEGG+
Sbjct 11 DGELTLRTGVAGRAARTGHALTIGFDDWHGEVTFDDETPVAVSLRVDVESMQVRSGEGGL 70
Query 92 KGLSEPEKALVRANALKTLNASRFPHIRFTTEAIAQTGNGYRLTGKLHIRGKSREHVIDL 151
++ PE+ + R NALK+L +S+F I FT + + GYRL G L + G +R H +++
Sbjct 71 TPMTAPERLVARTNALKSLKSSKFGEIVFTADTVTAVDGGYRLAGSLTVCGTARPHTVEV 130
Query 152 HTEDLGAAWRISADTTVRQSNYGVKPYSLLMGSIRVADEVSVAFTAVRAK 201
+ +S ++TV Q+++GVKPYSL+MG+++VAD+V VA A A+
Sbjct 131 TAD----GTTVSGESTVTQTDFGVKPYSLMMGALKVADDVVVALRATVAQ 176
>gi|343924962|ref|ZP_08764497.1| hypothetical protein GOALK_030_00200 [Gordonia alkanivorans NBRC
16433]
gi|343765102|dbj|GAA11423.1| hypothetical protein GOALK_030_00200 [Gordonia alkanivorans NBRC
16433]
Length=182
Score = 141 bits (356), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 72/168 (43%), Positives = 105/168 (63%), Gaps = 3/168 (1%)
Query 21 VSDAVWTLDASDGELVLRTGVVGRAARLGHRLTIAMTRWQALVNWSGTDPVAGELVAE-- 78
++++VW SDG +V+ T V GRAAR GHRLTIAM W A V + D V L A
Sbjct 1 MAESVWEFTESDGSVVVHTDVGGRAARTGHRLTIAMRTWSASVTLTD-DLVPTNLSATIA 59
Query 79 VDSFEVMRGEGGVKGLSEPEKALVRANALKTLNASRFPHIRFTTEAIAQTGNGYRLTGKL 138
VDS V GEGG+ ++ E++L R NALK++ A ++P I + + + T GYR G L
Sbjct 60 VDSMHVESGEGGLTPMTGAERSLARMNALKSMGADKYPEITYAADTFSTTDGGYRADGVL 119
Query 139 HIRGKSREHVIDLHTEDLGAAWRISADTTVRQSNYGVKPYSLLMGSIR 186
I G+S H +DL + W+IS ++T+ QS++G+KPYSL+MG+++
Sbjct 120 TIHGRSHPHGLDLQVVETADGWQISTESTITQSDFGIKPYSLMMGTLK 167
>gi|296140291|ref|YP_003647534.1| hypothetical protein Tpau_2592 [Tsukamurella paurometabola DSM
20162]
gi|296028425|gb|ADG79195.1| conserved hypothetical protein [Tsukamurella paurometabola DSM
20162]
Length=178
Score = 132 bits (331), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 68/167 (41%), Positives = 103/167 (62%), Gaps = 0/167 (0%)
Query 27 TLDASDGELVLRTGVVGRAARLGHRLTIAMTRWQALVNWSGTDPVAGELVAEVDSFEVMR 86
T+D S L + TGV GR+ARLGHRL +A W+A + G PV+ + + S EV+
Sbjct 6 TIDQSSAVLEVHTGVAGRSARLGHRLVLAPGTWRADIGVDGDQPVSIAVTVDARSLEVVS 65
Query 87 GEGGVKGLSEPEKALVRANALKTLNASRFPHIRFTTEAIAQTGNGYRLTGKLHIRGKSRE 146
GEGG+ LS PE+ + ANA ++L P I + + ++A + NG+R+ G+L I G R
Sbjct 66 GEGGLTPLSAPERTVATANAQRSLKTKTNPAIEYRSTSVAASENGFRVQGELTICGAVRS 125
Query 147 HVIDLHTEDLGAAWRISADTTVRQSNYGVKPYSLLMGSIRVADEVSV 193
L E+ A ++ VRQS++G+KP+SL+MG+++VADEV+V
Sbjct 126 CDFALVYEEAEPAPVLATAVPVRQSDFGIKPFSLMMGTLQVADEVTV 172
>gi|296269610|ref|YP_003652242.1| YceI family protein [Thermobispora bispora DSM 43833]
gi|296092397|gb|ADG88349.1| YceI family protein [Thermobispora bispora DSM 43833]
Length=186
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/178 (35%), Positives = 89/178 (50%), Gaps = 7/178 (3%)
Query 21 VSDAVWTLDASDGELVLRTGVVGRAARLGHRLTIAMTRWQALVNWSGTDP--VAGELVAE 78
VS + L G L + T G A GH LTI TRW+ L DP + + E
Sbjct 5 VSTGRYVLSPETGRLFIHTTRSGPGAMAGHDLTIEATRWRGLAVADLEDPAKCSVNVEVE 64
Query 79 VDSFEVMRGEGGVKGLSEPEKALVRANAL-KTLNASRFPHIRFTTEAIAQTGNGYRLTGK 137
VDS EV G GG+K L++ ++A ++ N K L + R+P I F + T +R G
Sbjct 65 VDSLEVREGTGGLKQLTDSDRAEIKRNICDKVLKSVRYPKIIFESRRFEGTPESFRCEGD 124
Query 138 LHIRGKSREHVIDLHTEDLGAAWRISADTTVRQSNYGVKPYSLLMGSIRVADEVSVAF 195
L I R V+D D W + TTV+QS +G++P+S G++R+ D++ V F
Sbjct 125 LTITDVRRPVVLDCRVVD---GW-VQGTTTVKQSRWGIRPFSAFFGALRLDDDIQVRF 178
>gi|134100959|ref|YP_001106620.1| hypothetical protein SACE_4426 [Saccharopolyspora erythraea NRRL
2338]
gi|133913582|emb|CAM03695.1| hypothetical protein SACE_4426 [Saccharopolyspora erythraea NRRL
2338]
Length=181
Score = 87.8 bits (216), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 57/172 (34%), Positives = 87/172 (51%), Gaps = 6/172 (3%)
Query 26 WTLDASDGELVLRTGVVGRAARLGHRLTIAMTRWQ--ALVNWSGTDPVAGELVAEVDSFE 83
+ L G L++RT G AR+GH LT+ TRW+ A V+ S + + +VD +
Sbjct 8 FQLGPDVGTLLVRTFRAGVGARVGHDLTLVATRWRGRAEVDESDLAVCSVHVRIDVDGLQ 67
Query 84 VMRGEGGVKGLSEPEKALVRANALKTLNASRFPHIRFTTEAIAQTGNGYRLTGKLHIRGK 143
V GEGG K L++ +K + N L A P I F + +A+ ++G L I G
Sbjct 68 VRSGEGGAKPLTDSDKRSIEGNIRGVLAAEDHPEIEFASTGVAEEREAIVVSGTLSIVGV 127
Query 144 SREHVIDLHTEDLGAAWRISADTTVRQSNYGVKPYSLLMGSIRVADEVSVAF 195
+R + H + R+ V QS +G++PYS G++RV DEV+V F
Sbjct 128 ARPVRLVCHRD----GDRVRGSAEVVQSEWGIEPYSAFFGALRVKDEVTVEF 175
>gi|297153531|gb|ADI03243.1| hypothetical protein SBI_00122 [Streptomyces bingchenggensis
BCW-1]
Length=185
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/177 (33%), Positives = 91/177 (52%), Gaps = 11/177 (6%)
Query 25 VWTLDASDGELVLRTGVVGRAARLGHRLTIAMTRWQALVNWSGTDPVAGELVAEVD--SF 82
++ S G L+++T +G + GH LTI TRW DP + EV+ S
Sbjct 1 MYGFGPSTGRLLIKTSRIGLGRKAGHDLTIEATRWSGKAVVVADDPGKSSVTVEVETGSL 60
Query 83 EVMRGEGGVKGLSEPEKALVR----ANALKTLNASRFPHIRFTTEAIAQTGNGYRLTGKL 138
V G GG+K L++ ++A ++ AL L+ASR P I F + I T + +TG L
Sbjct 61 IVREGAGGLKPLADADRAQIKRTLEGEAL--LHASRHPAIVFRSTGITGTLQSFEITGDL 118
Query 139 HIRGKSREHVIDLHTEDLGAAWRISADTTVRQSNYGVKPYSLLMGSIRVADEVSVAF 195
I+G R H +H G + TV QS +G+KPY+ +G++++ADEV + +
Sbjct 119 TIKG--RTHPATVHGGSDGNGM-VCGRGTVTQSTWGIKPYTAFLGTLKLADEVRIEY 172
>gi|271970211|ref|YP_003344407.1| hypothetical protein Sros_9033 [Streptosporangium roseum DSM
43021]
gi|270513386|gb|ACZ91664.1| hypothetical protein Sros_9033 [Streptosporangium roseum DSM
43021]
Length=187
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/171 (33%), Positives = 86/171 (51%), Gaps = 7/171 (4%)
Query 28 LDASDGELVLRTGVVGRAARLGHRLTIAMTRWQALVNWSGTDPVAGELVAEVD--SFEVM 85
L G L++ T G A+ GH LTI +TRW+ DP + E D SFEV
Sbjct 11 LGPESGRLLVNTTRTGLGAKAGHDLTIEVTRWRGDATIDIADPAGSSVTVEADAGSFEVR 70
Query 86 RGEGGVKGLSEPE-KALVRANALKTLNASRFPHIRFTTEAIAQTGNGYRLTGKLHIRGKS 144
G GGVK LS+ + + + R K L+ P I F + ++ T +R+ G+L I G +
Sbjct 71 EGTGGVKPLSDSDRREIKRILQEKILHVESHPAITFRSTRVSGTAESFRVEGELTIVGVT 130
Query 145 REHVIDLHTEDLGAAWRISADTTVRQSNYGVKPYSLLMGSIRVADEVSVAF 195
R + + + A R + Q+ +G++PYS G+++++DEV V F
Sbjct 131 RPVTV----QGVLAEGRARGSAAIAQTRWGIRPYSAFFGTLKLSDEVEVRF 177
>gi|291003426|ref|ZP_06561399.1| hypothetical protein SeryN2_02772 [Saccharopolyspora erythraea
NRRL 2338]
Length=163
Score = 85.1 bits (209), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 54/161 (34%), Positives = 82/161 (51%), Gaps = 6/161 (3%)
Query 37 LRTGVVGRAARLGHRLTIAMTRWQ--ALVNWSGTDPVAGELVAEVDSFEVMRGEGGVKGL 94
+RT G AR+GH LT+ TRW+ A V+ S + + +VD +V GEGG K L
Sbjct 1 MRTFRAGVGARVGHDLTLVATRWRGRAEVDESDLAVCSVHVRIDVDGLQVRSGEGGAKPL 60
Query 95 SEPEKALVRANALKTLNASRFPHIRFTTEAIAQTGNGYRLTGKLHIRGKSREHVIDLHTE 154
++ +K + N L A P I F + +A+ ++G L I G +R + H +
Sbjct 61 TDSDKRSIEGNIRGVLAAEDHPEIEFASTGVAEEREAIVVSGTLSIVGVARPVRLVCHRD 120
Query 155 DLGAAWRISADTTVRQSNYGVKPYSLLMGSIRVADEVSVAF 195
R+ V QS +G++PYS G++RV DEV+V F
Sbjct 121 ----GDRVRGSAEVVQSEWGIEPYSAFFGALRVKDEVTVEF 157
>gi|345013358|ref|YP_004815712.1| YceI family protein [Streptomyces violaceusniger Tu 4113]
gi|344039707|gb|AEM85432.1| YceI family protein [Streptomyces violaceusniger Tu 4113]
Length=190
Score = 81.6 bits (200), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/186 (33%), Positives = 92/186 (50%), Gaps = 21/186 (11%)
Query 21 VSDAVWTLDASDGELVLRTGVVGRAARLGHRLTIAMTRW--QALVNWSGTDPVAGELVAE 78
+S+ L G L+++T G R GH LTI TRW +A V + + + E
Sbjct 3 LSEGSHRLGPPGGRLLIKTSRTGLGRRAGHDLTIEATRWSGEATVVDRAPEKSSVTVTVE 62
Query 79 VDSFEVMRGEGGVKGLSEPEKALVRANALK---TLNASRFPHIRFTTEAIAQTGNGYRLT 135
DS V GG+K LSE ++A + LK L+ + +P I F + I T + +T
Sbjct 63 ADSLRVREATGGLKPLSEGDRAEIE-RTLKGEGLLHTAEYPTITFRSTHITGTPESFEIT 121
Query 136 GKLHIRGKSREHVIDLHTEDLGAAWRISADTTVR------QSNYGVKPYSLLMGSIRVAD 189
G L I+G R H + +H R + T+R QS +G+KPYS +G+++++D
Sbjct 122 GDLTIKG--RTHPVTVHG-------RCDPEGTLRGWASVTQSTWGIKPYSAFLGALKLSD 172
Query 190 EVSVAF 195
EV V F
Sbjct 173 EVRVEF 178
>gi|333920756|ref|YP_004494337.1| hypothetical protein AS9A_3092 [Amycolicicoccus subflavus DQS3-9A1]
gi|333482977|gb|AEF41537.1| hypothetical protein AS9A_3092 [Amycolicicoccus subflavus DQS3-9A1]
Length=164
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/159 (29%), Positives = 81/159 (51%), Gaps = 7/159 (4%)
Query 37 LRTGVVGRAARLGHRLTIAMTRWQ--ALVNWSGTDPVAGELVAEVDSFEVMRGEGGVKGL 94
++T G AR GH L I W A+V G+ V E+ A S + GG+K +
Sbjct 1 MKTSRSGLGARAGHDLVIEAAEWTGTAVVGPDGSARVHVEVNA--GSLTIRDALGGLKPM 58
Query 95 SEPEKALVRANALKTLNASRFPHIRFTTEAIAQTGNGYRLTGKLHIRGKSREHVIDLHTE 154
+ ++ + N +K L ++P I F ++ QTG+ G L + G ++ + +
Sbjct 59 TSSDRKMTEKNMVKVLQPGKYPMITFVADSTGQTGDAVTAPGALTLVGNTQPLTV---SG 115
Query 155 DLGAAWRISADTTVRQSNYGVKPYSLLMGSIRVADEVSV 193
+ ++ R+ A TV QS +G+ P+S G++R+AD+V+V
Sbjct 116 TVSSSGRLRASATVTQSRWGITPFSAFFGALRLADDVAV 154
>gi|262193415|ref|YP_003264624.1| YceI family protein [Haliangium ochraceum DSM 14365]
gi|262076762|gb|ACY12731.1| YceI family protein [Haliangium ochraceum DSM 14365]
Length=175
Score = 66.2 bits (160), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/173 (29%), Positives = 82/173 (48%), Gaps = 17/173 (9%)
Query 29 DASDGELVLRTGVVGRAARLGHRLTIAMTRWQALVNWSGTDPVAGELVAEVDSFEVMRGE 88
DAS E ++ T G +RLGH L + +T ++ D A + A D+ +
Sbjct 5 DASTAECLVFTYKDGLLSRLGHDLKLRVTSFEV-----EADEAAPSVSASFDASSLRVDC 59
Query 89 GGVKGLSEP-------EKALVRANALKTLNASRFPHIRFTTEAIAQTGNG-YRLTGKLHI 140
V G P +K + A L+A +FP +RFT+ +++ +G Y +TG L +
Sbjct 60 AVVDGEENPHLLTGVDQKKIAGQIAHDVLHAEKFPEVRFTSSKLSKRDDGGYDITGTLTL 119
Query 141 RGKSREHVIDLHTEDLGAAWRISADTTVRQSNYGVKPYSLLMGSIRVADEVSV 193
G ++E I ED + D T+ Q +Y + PY +MG++++ EV V
Sbjct 120 HGVAKEISIRSQPED----GKQVVDFTLHQPDYDISPYRAVMGTLKIKPEVRV 168
>gi|295132412|ref|YP_003583088.1| hypothetical protein ZPR_0535 [Zunongwangia profunda SM-A87]
gi|294980427|gb|ADF50892.1| secreted protein [Zunongwangia profunda SM-A87]
Length=179
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/140 (28%), Positives = 70/140 (50%), Gaps = 15/140 (10%)
Query 56 MTRWQALVNWSGTDPVAGELVAEVDSFEVMRGEGGVKGLSEPEKALVRANALKTLNASRF 115
MT +A+ ++ E+ E+ + G+GG+ NA K LN +
Sbjct 49 MTSEKAVGTVQSSNGTISEISIEIPVKSLESGKGGM-----------DKNAYKALNEDDY 97
Query 116 PHIRFTTEAIAQTGNGYRLTGKLHIRGKSREHVIDLHTEDLGAAWRISADTTVRQSNYGV 175
P I+F++ ++ + ++ G L I GKS+ I + T+ G + IS + ++YGV
Sbjct 98 PTIKFSSTEVSSS----KIKGHLIINGKSKTVSIPVSTKKSGESIEISGKYKINMTHYGV 153
Query 176 KPYSLLMGSIRVADEVSVAF 195
+P + LMG+I+ +EV++ F
Sbjct 154 EPPTALMGTIKTGEEVTINF 173
>gi|91200797|emb|CAJ73850.1| hypothetical protein kuste3094 [Candidatus Kuenenia stuttgartiensis]
Length=186
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/178 (23%), Positives = 88/178 (50%), Gaps = 10/178 (5%)
Query 26 WTLDASDGELVLRTGVVGRAARLGHRLTIAMTRWQALVNWSGTDPVAGELVAEV--DSFE 83
++ D + G++ + T G + + H L + +TR++ +N D + + + ++ +
Sbjct 8 YSFDENTGKIQVYTFKEGMLSTVAHDLLLDVTRFKVDLNIPSDDLSSATINVTIPANALK 67
Query 84 VM----RGEGGVKGLSEPEKALVR-ANALKTLNASRFPHIRFTTEAIAQTGNGYRLTGKL 138
V+ G+ L E +K+ + A L++ ++P I F + + + GY TG+L
Sbjct 68 VVCAMKNGQQQNDTLKEKDKSEIEEATNNDVLHSEKYPTISFQSTGVGKNNVGYHTTGEL 127
Query 139 HIRGKSREHVIDLHTEDLGAAWRISADTTVRQSNYGVKPYSLLMGSIRVADEVSVAFT 196
+ G + + I+ E L + + Q YG+KPY L+G+++V + +++AF+
Sbjct 128 TLHGVT--NTIEFDCE-LTVESILKGSVDLMQKEYGIKPYKALLGALKVKNNITIAFS 182
>gi|255535620|ref|YP_003095991.1| hypothetical protein FIC_01481 [Flavobacteriaceae bacterium 3519-10]
gi|255341816|gb|ACU07929.1| hypothetical protein FIC_01481 [Flavobacteriaceae bacterium 3519-10]
Length=177
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/96 (27%), Positives = 51/96 (54%), Gaps = 2/96 (2%)
Query 99 KALVRANALKTLNASRFPHIRFTTEAIAQTGNGYRLTGKLHIRGKSREHVIDLHTEDLGA 158
K + NA K + A +FP+I FT ++ G G +TGKL + ++ + G
Sbjct 78 KGPMDTNAYKAMKADKFPNITFTATSV-NIGKG-TITGKLKVTDVTKTVSFPVTVVKNGT 135
Query 159 AWRISADTTVRQSNYGVKPYSLLMGSIRVADEVSVA 194
A+ I+ ++ ++YGV P S +M +++ +++ ++
Sbjct 136 AYTITGTEAIKLTDYGVTPPSFMMNTVKTGNDIKIS 171
>gi|304393782|ref|ZP_07375707.1| cytochrome B561 [Ahrensia sp. R2A130]
gi|303293981|gb|EFL88356.1| cytochrome B561 [Ahrensia sp. R2A130]
Length=412
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/155 (27%), Positives = 67/155 (44%), Gaps = 17/155 (10%)
Query 21 VSDAVWTLDASDGELVLRTGVVGRAARLGHRLTIAMTRWQALVNWSGTDPVAGELVAEVD 80
V+ W +D + L GV R ++G ++ + W A V + TDP +G + A V
Sbjct 250 VTAGAWVIDQAQSTL----GVTIR--QMGSPVSGSFGEWSADVVFDPTDPASGSIDATVQ 303
Query 81 SFEVMRGEGGVKGLSEPEKALVRANALKTLNASRFPHIRFTTEAIAQTGNGYRLTGKLHI 140
+ G+ + + + E AN P RF +E+I T GYR TG L +
Sbjct 304 TATFQMGDNTARAIGD-EFLATGAN----------PTARFVSESIGTTDTGYRATGMLML 352
Query 141 RGKSREHVIDLHTEDLGAAWRISADTTVRQSNYGV 175
G VID + +SA +++ ++GV
Sbjct 353 SGTEAPAVIDFTFAEADGVATVSATIPIKRLDFGV 387
>gi|268316003|ref|YP_003289722.1| YceI family protein [Rhodothermus marinus DSM 4252]
gi|262333537|gb|ACY47334.1| YceI family protein [Rhodothermus marinus DSM 4252]
Length=198
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/96 (30%), Positives = 45/96 (47%), Gaps = 5/96 (5%)
Query 108 KTLNASRFPHIRFT---TEAIAQTGNGYRLT--GKLHIRGKSREHVIDLHTEDLGAAWRI 162
+ L A P IRF +++A GYRL G+L I G + + + WR
Sbjct 95 EALKAEDHPEIRFVLTRVDSVAAVAEGYRLQVQGRLTIAGAEQPVQMQVLARPEDGGWRF 154
Query 163 SADTTVRQSNYGVKPYSLLMGSIRVADEVSVAFTAV 198
+ + +G+KP + ++G++R DEV V F V
Sbjct 155 QGEQPLSMKVFGIKPPTAMLGTLRTGDEVVVHFDVV 190
>gi|226226082|ref|YP_002760188.1| hypothetical protein GAU_0676 [Gemmatimonas aurantiaca T-27]
gi|226089273|dbj|BAH37718.1| hypothetical protein [Gemmatimonas aurantiaca T-27]
Length=197
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/91 (29%), Positives = 47/91 (52%), Gaps = 3/91 (3%)
Query 108 KTLNASRFPHIRFTTEA---IAQTGNGYRLTGKLHIRGKSREHVIDLHTEDLGAAWRISA 164
K L A+ P+IRF E TG L G L + G+S+ I + R++
Sbjct 101 KALKATDNPNIRFVLEGYDLTKTTGVSGALRGSLQMAGQSKPITIPVQFASAEGGLRVTG 160
Query 165 DTTVRQSNYGVKPYSLLMGSIRVADEVSVAF 195
++ + +G+KP +L++G+++V + V+V F
Sbjct 161 KVPIKMTEWGMKPPTLMLGTLKVGETVTVNF 191
>gi|187920534|ref|YP_001889566.1| YceI family protein [Burkholderia phytofirmans PsJN]
gi|187718972|gb|ACD20195.1| YceI family protein [Burkholderia phytofirmans PsJN]
Length=191
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 85/200 (43%), Gaps = 17/200 (8%)
Query 3 HKTRREGRAGRSSEYSRGVSDAVWTLDASDGELVLRTGVVGRAARLGHRLTIAMTRWQAL 62
H +R AG ++ G S A +D S ++ V+ ++ + ++ A
Sbjct 7 HSVQRMTLAGIAAFSLFGASLAHADIDTS------KSSVIATTKQMNVPVDGKFRKFSAQ 60
Query 63 VNWSGTDPVAGELVAEVDSFEVMRGEGGVKGLSEPEKALVRANALKTLNASRFPHIRFTT 122
+N+ P AG +D+ G E +A + +++ FP F +
Sbjct 61 LNFDPAKPTAGSANVSIDTGSYDLGA---------EDYNKQAQGKEWFDSATFPAATFVS 111
Query 123 EAIAQTG-NGYRLTGKLHIRGKSREHVIDLHTEDLGAAWRISADTTVRQSNYGVKPYSLL 181
AIA G N Y++TGKL I+GKS+ V+ + GA +++S + V
Sbjct 112 SAIAPAGGNQYKITGKLTIKGKSQTVVVPVTIASQGATQTFDGTLPIKRSQFDVGTGEWK 171
Query 182 MGSIRVADEVSVAFTAVRAK 201
S+ VADEV + F V +K
Sbjct 172 DTSV-VADEVVIKFHLVASK 190
>gi|345302306|ref|YP_004824208.1| YceI family protein [Rhodothermus marinus SG0.5JP17-172]
gi|345111539|gb|AEN72371.1| YceI family protein [Rhodothermus marinus SG0.5JP17-172]
Length=198
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/96 (30%), Positives = 44/96 (46%), Gaps = 5/96 (5%)
Query 108 KTLNASRFPHIRFT---TEAIAQTGNGYRLT--GKLHIRGKSREHVIDLHTEDLGAAWRI 162
+ L A P IRF +++A GYRL G+L I G + + + WR
Sbjct 95 EALKAEDHPEIRFVLTRVDSVAAAAEGYRLQVQGRLTIAGAEQPVQMQVLARPEDGGWRF 154
Query 163 SADTTVRQSNYGVKPYSLLMGSIRVADEVSVAFTAV 198
+ +G+KP + ++G++R DEV V F V
Sbjct 155 QGAQPLSMKAFGIKPPTAMLGTLRTGDEVVVHFDVV 190
>gi|90415713|ref|ZP_01223647.1| hypothetical protein GB2207_10356 [marine gamma proteobacterium
HTCC2207]
gi|90333036|gb|EAS48206.1| hypothetical protein GB2207_10356 [marine gamma proteobacterium
HTCC2207]
Length=221
Score = 49.3 bits (116), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/181 (20%), Positives = 83/181 (46%), Gaps = 6/181 (3%)
Query 24 AVWTLDASDGELVLRTGVVGRAARLGHRLTIAMTRWQALVNWSGTDPVAGELVAEVDSF- 82
+++ LD++ + ++ G A+ GH +A Q + + + A++++
Sbjct 37 SLYQLDSASSMVQIKVLRGGAMAKFGHDHIVASRDIQGYLLLGDNNACRADFYADINNLI 96
Query 83 ---EVMRGEGGV-KGLSEPEKALVRANALKTLNASRFPHIRFTTEAIAQTGNGYRLTGKL 138
V+R + SE + A + N L +L A +FP ++ + + +G +T +
Sbjct 97 VDDPVLRDRANLLTTPSEKDIAGTKTNMLISLQAEKFPFVQLQSLDCSGALDGQPVTTSI 156
Query 139 HIRGKSREHVIDLHTEDLGA-AWRISADTTVRQSNYGVKPYSLLMGSIRVADEVSVAFTA 197
+ G +E + + + IS + Q+++G++P+S+ G +RV D + +++
Sbjct 157 SLHGVIQEQQLTMTVARPNTNSVVISGSFAILQTDFGIEPFSVFNGLLRVKDRLEISYQL 216
Query 198 V 198
V
Sbjct 217 V 217
>gi|116626206|ref|YP_828362.1| YceI family protein [Candidatus Solibacter usitatus Ellin6076]
gi|116229368|gb|ABJ88077.1| YceI family protein [Candidatus Solibacter usitatus Ellin6076]
Length=188
Score = 48.9 bits (115), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/106 (30%), Positives = 58/106 (55%), Gaps = 7/106 (6%)
Query 93 GLSEPEKALVRANAL--KTLNASRFPHIRF-TTEAIAQTGNGYRLTGKLHIRGKSREHVI 149
G+S+ ++A V+A L + L+A P I F +T A + + +++ G L + G++R +
Sbjct 80 GVSDKDRAQVQATMLSPEVLDAEHNPEIIFRSTNAQSSGESAWKVQGNLTLHGQTRPVTL 139
Query 150 DLHTEDLGAAWRISADTTVRQSNYGVKPYSLLMGSIRVADEVSVAF 195
D+ E R +++Q+ +G+KP G++RV DEV + F
Sbjct 140 DVRQE----GDRYQGTASLKQTEFGIKPVKTGGGAVRVKDEVRIEF 181
>gi|186473009|ref|YP_001860351.1| YceI family protein [Burkholderia phymatum STM815]
gi|184195341|gb|ACC73305.1| YceI family protein [Burkholderia phymatum STM815]
Length=193
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/166 (28%), Positives = 73/166 (44%), Gaps = 13/166 (7%)
Query 38 RTGVVGRAARLGHRLTIAMTRWQALVNWSGTDPVAGELVAEVDSFEVMRGEGGVKGLSEP 97
R+ VV + ++ + ++ A +N+ P AG +D+ G L +
Sbjct 38 RSTVVATSKQMNVPVDGTFRKFTAQLNFDPAKPTAGSANLTIDT--------GSYDLGDA 89
Query 98 E-KALVRANALKTLNASRFPHIRFTTEAIAQTG-NGYRLTGKLHIRGKSREHVIDLHTED 155
E VR +++ FP F + IA G N Y++TGKL I+GKS+ + +
Sbjct 90 EYNKQVRGKEW--FDSATFPTATFVSTGIAPAGGNQYKVTGKLTIKGKSQTVTVPVAIAQ 147
Query 156 LGAAWRISADTTVRQSNYGVKPYSLLMGSIRVADEVSVAFTAVRAK 201
LGA +R++ Y V S+ VAD+V + F V AK
Sbjct 148 LGATQTFDGSLPIRRTQYDVGTGEWKDTSV-VADDVVIKFHIVAAK 192
>gi|149279082|ref|ZP_01885215.1| hypothetical protein PBAL39_07280 [Pedobacter sp. BAL39]
gi|149230084|gb|EDM35470.1| hypothetical protein PBAL39_07280 [Pedobacter sp. BAL39]
Length=185
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/110 (27%), Positives = 55/110 (50%), Gaps = 6/110 (5%)
Query 90 GVKGLSEPEKALVRANALKTLNASRFPHIRFTTEAIAQTGNGYRLTGKLHIRGKSREHVI 149
VK L E ++ A K ++A ++P+I F + G L I G S+ +
Sbjct 74 AVKNLKAKENSMT-GRAHKAMDADKYPNISFKLAKADVADQQVKANGTLTIGGTSK--AV 130
Query 150 DLH---TEDLGAAWRISADTTVRQSNYGVKPYSLLMGSIRVADEVSVAFT 196
DL T + ++ I ++ S YG+KP S ++G+++V D++++ +T
Sbjct 131 DLQGKITANADGSFLIKGSRKIKMSEYGIKPPSYMLGAMKVYDDLTIEYT 180
>gi|91778064|ref|YP_553272.1| hypothetical protein Bxe_B2065 [Burkholderia xenovorans LB400]
gi|91690724|gb|ABE33922.1| putative exported protein [Burkholderia xenovorans LB400]
Length=191
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 41/147 (28%), Positives = 69/147 (47%), Gaps = 15/147 (10%)
Query 58 RWQALVNWSGTDPVAGELVAEVD--SFEVMRGEGGVKGLSEPEKALVRANALKTLNASRF 115
++ A +N+ P AG +D S+++ G + K +A + +++ +
Sbjct 56 KFSAQLNFDPAKPTAGSANVSIDTGSYDL--------GSDDYNK---QAQGKEWFDSAAY 104
Query 116 PHIRFTTEAIAQTG-NGYRLTGKLHIRGKSREHVIDLHTEDLGAAWRISADTTVRQSNYG 174
P F + AIA G N YR+TGKL I+GKS+ V+ + GA +++S +
Sbjct 105 PAATFVSSAIAPAGGNQYRITGKLTIKGKSQTVVVPVTIASQGATQTFDGSLPIKRSQFD 164
Query 175 VKPYSLLMGSIRVADEVSVAFTAVRAK 201
V S+ VADEV + F V +K
Sbjct 165 VGTGEWKDTSV-VADEVVIKFHLVASK 190
>gi|134095860|ref|YP_001100935.1| hypothetical protein HEAR2692 [Herminiimonas arsenicoxydans]
gi|133739763|emb|CAL62814.1| Conserved hypothetical protein [Herminiimonas arsenicoxydans]
Length=236
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 48/187 (26%), Positives = 85/187 (46%), Gaps = 20/187 (10%)
Query 25 VWTLDASDGELVLRTGVVGRAARLGHRLTIAMTRWQALVNWSGTDPVAG--ELVAEVDSF 82
++ +++ LVL G AR GH +A V+ PV G +L ++
Sbjct 59 IFRVNSQQSLLVLEVRRAGAFARFGHDHVVASHDVTGFVS-----PVDGRADLSVPLEKL 113
Query 83 EV----MRGEGGVKGLSEPEKALV---RANAL-KTLNASRFPHIRFTTEAIAQTGNGYRL 134
+ +R E G+ ++P + + R N L K L+A++FP E + +
Sbjct 114 VIDEAALRVEAGLS--TQPTQEDIEGTRRNMLNKVLDAAQFPLALIHIER-KSAESAMAV 170
Query 135 TGKLHIRGKSREHVIDLHTEDLGAAWRISADTTVRQSNYGVKPYSLLMGSIRVADEVSVA 194
T KLH G SR + + ++ +S +QS++G+ P+S+L G+I+V D + +
Sbjct 171 TIKLH--GISRSFEVPVEMQETAEGLLVSGKMHFKQSDFGIVPFSILNGAIQVQDRLDLR 228
Query 195 FTAVRAK 201
F V K
Sbjct 229 FRIVAGK 235
>gi|116622932|ref|YP_825088.1| hypothetical protein Acid_3834 [Candidatus Solibacter usitatus
Ellin6076]
gi|116226094|gb|ABJ84803.1| hypothetical protein Acid_3834 [Candidatus Solibacter usitatus
Ellin6076]
Length=204
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/94 (36%), Positives = 51/94 (55%), Gaps = 11/94 (11%)
Query 116 PHIRF-TTEAIAQTGNGY------RLTGKLHIRGKSREHVIDLHTEDLGAAWRISADTTV 168
P +RF T +A+ +G+ +L+G L IRG +R VI L G A+R + D TV
Sbjct 103 PDLRFETPDALCTPQSGHAGEFSCKLSGTLAIRGVARPFVIPLKLRAEGQAFRAAGDATV 162
Query 169 RQSNYGVKPYSLLMGSIRVADEVSV--AFTAVRA 200
+ S+YG++ S ++ A+E+ V FTA A
Sbjct 163 KLSDYGIEQPSQF--GVKTANEIQVHLDFTAKEA 194
>gi|327402615|ref|YP_004343453.1| YceI family protein [Fluviicola taffensis DSM 16823]
gi|327318123|gb|AEA42615.1| YceI family protein [Fluviicola taffensis DSM 16823]
Length=179
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/66 (35%), Positives = 35/66 (54%), Gaps = 0/66 (0%)
Query 110 LNASRFPHIRFTTEAIAQTGNGYRLTGKLHIRGKSREHVIDLHTEDLGAAWRISADTTVR 169
AS+FP I+F + + +TG +TGKL ++G ++E I GA S TV
Sbjct 92 FEASKFPTIKFVSSKVEKTGENISITGKLTMKGITKEKKITATVSKTGADLTFSGKFTVN 151
Query 170 QSNYGV 175
+ +YGV
Sbjct 152 RIDYGV 157
>gi|220913834|ref|YP_002489143.1| YceI family protein [Arthrobacter chlorophenolicus A6]
gi|219860712|gb|ACL41054.1| YceI family protein [Arthrobacter chlorophenolicus A6]
Length=182
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/93 (31%), Positives = 50/93 (54%), Gaps = 11/93 (11%)
Query 110 LNASRFPHIRFTTEAIAQTGNGYRLTGKLHIRGKSREHVIDLHTEDLGAAWR-------- 161
+ +FP + F + + GN Y LTG L I+G +R + L TE G A
Sbjct 81 FDVEKFPEMSFVSNGLVAKGNSYELTGDLTIKGVTRP--VTLETEFNGVAVDPFGNTRAG 138
Query 162 ISADTTVRQSNYGVKPYSLL-MGSIRVADEVSV 193
+SA+TT+ + ++G+ ++L G + V+D+V++
Sbjct 139 VSAETTISRKDFGLTWNAVLETGGVLVSDKVAI 171
>gi|295675558|ref|YP_003604082.1| YceI family protein [Burkholderia sp. CCGE1002]
gi|295435401|gb|ADG14571.1| YceI family protein [Burkholderia sp. CCGE1002]
Length=187
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/166 (26%), Positives = 73/166 (44%), Gaps = 11/166 (6%)
Query 36 VLRTGVVGRAARLGHRLTIAMTRWQALVNWSGTDPVAGELVAEVDSFEVMRGEGGVKGLS 95
V ++ V + ++ + ++ A V++ T P AG ++D V + G +
Sbjct 30 VAKSSVTATSKQMNVPVEGKFNKFSAQVSFDPTKPTAGSAQIDID---VASYDLGDESYD 86
Query 96 EPEKALVRANALKTLNASRFPHIRFTTEAIAQTG-NGYRLTGKLHIRGKSREHVIDLHTE 154
E + + +A FP F + IA G N +++TGKL I+GKS+ V+ +
Sbjct 87 E------QVRGKEWFDAKAFPRATFVSSEIAPAGANQFKVTGKLTIKGKSQTVVVPVTVS 140
Query 155 DLGAAWRISADTTVRQSNYGVKPYSLLMGSIRVADEVSVAFTAVRA 200
GA +++S + V S+ VADEV + F V A
Sbjct 141 QQGATQTFDGALPIKRSQFDVGTGEWKDTSV-VADEVVIKFHIVAA 185
>gi|313903233|ref|ZP_07836626.1| YceI family protein [Thermaerobacter subterraneus DSM 13965]
gi|313466544|gb|EFR62065.1| YceI family protein [Thermaerobacter subterraneus DSM 13965]
Length=188
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/93 (36%), Positives = 50/93 (54%), Gaps = 8/93 (8%)
Query 110 LNASRFPHIRFTTEAIAQTG-NGYRLTGKLHIRGKSREHVIDLHTEDLGA-AW-----RI 162
+ + +PHI F + I +TG N Y++TG L IRG ++E DL E G W
Sbjct 83 FDVANYPHIEFRSTRIEKTGENRYKVTGDLSIRGVTKEVTWDLTYEGGGKDPWGNQRVAF 142
Query 163 SADTTVRQSNYGVKPYSLL-MGSIRVADEVSVA 194
A+T V + ++G++ LL G + V DEV V+
Sbjct 143 HAETKVNRKDFGLQWNMLLESGGVLVGDEVRVS 175
Lambda K H
0.317 0.131 0.380
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 223603106580
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40