BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv1892
Length=103
Score E
Sequences producing significant alignments: (Bits) Value
gi|15609029|ref|NP_216408.1| hypothetical protein Rv1892 [Mycoba... 202 2e-50
gi|294996802|ref|ZP_06802493.1| hypothetical protein Mtub2_20438... 160 5e-38
gi|118616860|ref|YP_905192.1| hypothetical protein MUL_1141 [Myc... 156 7e-37
gi|254822529|ref|ZP_05227530.1| hypothetical protein MintA_21549... 150 8e-35
gi|296164913|ref|ZP_06847469.1| conserved hypothetical protein [... 141 3e-32
gi|183982791|ref|YP_001851082.1| hypothetical protein MMAR_2785 ... 141 3e-32
gi|240170539|ref|ZP_04749198.1| hypothetical protein MkanA1_1459... 138 2e-31
gi|145223878|ref|YP_001134556.1| hypothetical protein Mflv_3291 ... 130 9e-29
gi|315444207|ref|YP_004077086.1| hypothetical protein Mspyr1_261... 129 1e-28
gi|254775289|ref|ZP_05216805.1| hypothetical protein MaviaA2_115... 122 2e-26
gi|336457553|gb|EGO36559.1| hypothetical protein MAPs_22250 [Myc... 122 2e-26
gi|41407714|ref|NP_960550.1| hypothetical protein MAP1616 [Mycob... 122 2e-26
gi|118463564|ref|YP_881996.1| hypothetical protein MAV_2809 [Myc... 120 4e-26
gi|118470094|ref|YP_887827.1| hypothetical protein MSMEG_3523 [M... 112 2e-23
gi|126435334|ref|YP_001071025.1| hypothetical protein Mjls_2754 ... 110 5e-23
gi|262204408|ref|YP_003275616.1| hypothetical protein Gbro_4592 ... 110 5e-23
gi|120403995|ref|YP_953824.1| hypothetical protein Mvan_3013 [My... 110 8e-23
gi|108799690|ref|YP_639887.1| hypothetical protein Mmcs_2724 [My... 109 1e-22
gi|343928683|ref|ZP_08768128.1| hypothetical protein GOALK_120_0... 86.3 1e-15
gi|342859541|ref|ZP_08716194.1| hypothetical protein MCOL_11698 ... 66.2 1e-09
gi|336469539|gb|EGO57701.1| hypothetical protein NEUTE1DRAFT_815... 37.0 0.84
gi|342213880|ref|ZP_08706599.1| 6-phosphogluconolactonase [Veill... 35.4 3.2
gi|164428745|ref|XP_956997.2| hypothetical protein NCU00010 [Neu... 35.0 3.8
>gi|15609029|ref|NP_216408.1| hypothetical protein Rv1892 [Mycobacterium tuberculosis H37Rv]
gi|15841362|ref|NP_336399.1| hypothetical protein MT1942 [Mycobacterium tuberculosis CDC1551]
gi|31793084|ref|NP_855577.1| hypothetical protein Mb1925 [Mycobacterium bovis AF2122/97]
79 more sequence titles
Length=103
Score = 202 bits (513), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 103/103 (100%), Positives = 103/103 (100%), Gaps = 0/103 (0%)
Query 1 MIMCEGRPTESPIPRWLRFVLTSDRAGSAWYIGAGFFFAPVLAVLSPWPTITAVLWWIIG 60
MIMCEGRPTESPIPRWLRFVLTSDRAGSAWYIGAGFFFAPVLAVLSPWPTITAVLWWIIG
Sbjct 1 MIMCEGRPTESPIPRWLRFVLTSDRAGSAWYIGAGFFFAPVLAVLSPWPTITAVLWWIIG 60
Query 61 LAGLWLGLLGIAMAVGLARVLRSGAEIPEAYWRTLVDYRSANE 103
LAGLWLGLLGIAMAVGLARVLRSGAEIPEAYWRTLVDYRSANE
Sbjct 61 LAGLWLGLLGIAMAVGLARVLRSGAEIPEAYWRTLVDYRSANE 103
>gi|294996802|ref|ZP_06802493.1| hypothetical protein Mtub2_20438 [Mycobacterium tuberculosis
210]
Length=84
Score = 160 bits (406), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 83/84 (99%), Positives = 84/84 (100%), Gaps = 0/84 (0%)
Query 20 VLTSDRAGSAWYIGAGFFFAPVLAVLSPWPTITAVLWWIIGLAGLWLGLLGIAMAVGLAR 79
+LTSDRAGSAWYIGAGFFFAPVLAVLSPWPTITAVLWWIIGLAGLWLGLLGIAMAVGLAR
Sbjct 1 MLTSDRAGSAWYIGAGFFFAPVLAVLSPWPTITAVLWWIIGLAGLWLGLLGIAMAVGLAR 60
Query 80 VLRSGAEIPEAYWRTLVDYRSANE 103
VLRSGAEIPEAYWRTLVDYRSANE
Sbjct 61 VLRSGAEIPEAYWRTLVDYRSANE 84
>gi|118616860|ref|YP_905192.1| hypothetical protein MUL_1141 [Mycobacterium ulcerans Agy99]
gi|118568970|gb|ABL03721.1| conserved hypothetical membrane protein [Mycobacterium ulcerans
Agy99]
Length=97
Score = 156 bits (395), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 80/94 (86%), Positives = 83/94 (89%), Gaps = 0/94 (0%)
Query 5 EGRPTESPIPRWLRFVLTSDRAGSAWYIGAGFFFAPVLAVLSPWPTITAVLWWIIGLAGL 64
E + ESPIPRWLRFVL SDRAGSAWYIGAGFFFAPVL +LSPWP TAVLWWIIG+AGL
Sbjct 4 EAQQAESPIPRWLRFVLASDRAGSAWYIGAGFFFAPVLVLLSPWPAATAVLWWIIGVAGL 63
Query 65 WLGLLGIAMAVGLARVLRSGAEIPEAYWRTLVDY 98
WLGL GIAMAVGLARVLRSG EIPE Y RTLVDY
Sbjct 64 WLGLHGIAMAVGLARVLRSGDEIPEQYRRTLVDY 97
>gi|254822529|ref|ZP_05227530.1| hypothetical protein MintA_21549 [Mycobacterium intracellulare
ATCC 13950]
Length=92
Score = 150 bits (378), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 74/88 (85%), Positives = 80/88 (91%), Gaps = 0/88 (0%)
Query 11 SPIPRWLRFVLTSDRAGSAWYIGAGFFFAPVLAVLSPWPTITAVLWWIIGLAGLWLGLLG 70
SP+PRWLRFVL SDRAGSAWYIG GFFFAPVLAV SPWP +TAVLW +I +AGLWLGLLG
Sbjct 5 SPVPRWLRFVLASDRAGSAWYIGTGFFFAPVLAVFSPWPAVTAVLWGVIAVAGLWLGLLG 64
Query 71 IAMAVGLARVLRSGAEIPEAYWRTLVDY 98
IAMA+GLAR+LRSGAEIPE YWRTLV Y
Sbjct 65 IAMAIGLARILRSGAEIPEDYWRTLVHY 92
>gi|296164913|ref|ZP_06847469.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295899755|gb|EFG79205.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=96
Score = 141 bits (356), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 83/96 (87%), Positives = 89/96 (93%), Gaps = 0/96 (0%)
Query 3 MCEGRPTESPIPRWLRFVLTSDRAGSAWYIGAGFFFAPVLAVLSPWPTITAVLWWIIGLA 62
M +GRP E+P+PRWLRFVL SDRAGSAWYIG GFFFAPVLAVLSPWP +TAVLW IGLA
Sbjct 1 MTDGRPGETPVPRWLRFVLASDRAGSAWYIGTGFFFAPVLAVLSPWPVVTAVLWGAIGLA 60
Query 63 GLWLGLLGIAMAVGLARVLRSGAEIPEAYWRTLVDY 98
GLWLGLLGIAMAVGLARVLRSGAEIPE+YWRTLV+Y
Sbjct 61 GLWLGLLGIAMAVGLARVLRSGAEIPESYWRTLVNY 96
>gi|183982791|ref|YP_001851082.1| hypothetical protein MMAR_2785 [Mycobacterium marinum M]
gi|183176117|gb|ACC41227.1| conserved hypothetical membrane protein [Mycobacterium marinum
M]
Length=97
Score = 141 bits (355), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 83/94 (89%), Positives = 86/94 (92%), Gaps = 0/94 (0%)
Query 5 EGRPTESPIPRWLRFVLTSDRAGSAWYIGAGFFFAPVLAVLSPWPTITAVLWWIIGLAGL 64
E + ESPIPRWLRFVL SDRAGSAWYIGAGFFFAPVL +LSPWP +TAVLWWIIGLAGL
Sbjct 4 EAQQAESPIPRWLRFVLASDRAGSAWYIGAGFFFAPVLVLLSPWPAVTAVLWWIIGLAGL 63
Query 65 WLGLLGIAMAVGLARVLRSGAEIPEAYWRTLVDY 98
WLGLLGIAMAVGLARVLRSG EIPE YWRTLVDY
Sbjct 64 WLGLLGIAMAVGLARVLRSGDEIPEQYWRTLVDY 97
>gi|240170539|ref|ZP_04749198.1| hypothetical protein MkanA1_14595 [Mycobacterium kansasii ATCC
12478]
Length=97
Score = 138 bits (348), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 80/97 (83%), Positives = 88/97 (91%), Gaps = 0/97 (0%)
Query 2 IMCEGRPTESPIPRWLRFVLTSDRAGSAWYIGAGFFFAPVLAVLSPWPTITAVLWWIIGL 61
+ + +P ESPIPRWLRFVL SDRAGSAWY+G GFFFAPVLA++SPWP +TAVLWWII L
Sbjct 1 MTTDRKPAESPIPRWLRFVLASDRAGSAWYVGTGFFFAPVLALVSPWPAVTAVLWWIIAL 60
Query 62 AGLWLGLLGIAMAVGLARVLRSGAEIPEAYWRTLVDY 98
AGLWLGLLGIAMAVGLARVLRSG+EIPE YWRTLVDY
Sbjct 61 AGLWLGLLGIAMAVGLARVLRSGSEIPEHYWRTLVDY 97
>gi|145223878|ref|YP_001134556.1| hypothetical protein Mflv_3291 [Mycobacterium gilvum PYR-GCK]
gi|145216364|gb|ABP45768.1| conserved hypothetical protein [Mycobacterium gilvum PYR-GCK]
Length=109
Score = 130 bits (326), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 64/92 (70%), Positives = 74/92 (81%), Gaps = 0/92 (0%)
Query 7 RPTESPIPRWLRFVLTSDRAGSAWYIGAGFFFAPVLAVLSPWPTITAVLWWIIGLAGLWL 66
P + IPRWLR VL DRAGS+WYIG GFFFAP L V+SPWP +TA LW +I LAGLWL
Sbjct 13 HPPAARIPRWLRVVLRCDRAGSSWYIGLGFFFAPALIVVSPWPGLTAALWVVIALAGLWL 72
Query 67 GLLGIAMAVGLARVLRSGAEIPEAYWRTLVDY 98
G+LG+AMA GLA VLRSG EIPE YWR+++DY
Sbjct 73 GVLGVAMATGLAIVLRSGEEIPEDYWRSILDY 104
>gi|315444207|ref|YP_004077086.1| hypothetical protein Mspyr1_26190 [Mycobacterium sp. Spyr1]
gi|315262510|gb|ADT99251.1| hypothetical protein Mspyr1_26190 [Mycobacterium sp. Spyr1]
Length=103
Score = 129 bits (324), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 64/92 (70%), Positives = 74/92 (81%), Gaps = 0/92 (0%)
Query 7 RPTESPIPRWLRFVLTSDRAGSAWYIGAGFFFAPVLAVLSPWPTITAVLWWIIGLAGLWL 66
P + IPRWLR VL DRAGS+WYIG GFFFAP L V+SPWP +TA LW +I LAGLWL
Sbjct 7 HPPAARIPRWLRVVLRCDRAGSSWYIGLGFFFAPALIVVSPWPGLTAALWVVIALAGLWL 66
Query 67 GLLGIAMAVGLARVLRSGAEIPEAYWRTLVDY 98
G+LG+AMA GLA VLRSG EIPE YWR+++DY
Sbjct 67 GVLGVAMATGLAIVLRSGEEIPEDYWRSILDY 98
>gi|254775289|ref|ZP_05216805.1| hypothetical protein MaviaA2_11546 [Mycobacterium avium subsp.
avium ATCC 25291]
Length=104
Score = 122 bits (306), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/97 (80%), Positives = 83/97 (86%), Gaps = 3/97 (3%)
Query 5 EGRPTESP---IPRWLRFVLTSDRAGSAWYIGAGFFFAPVLAVLSPWPTITAVLWWIIGL 61
R TES +PRWLRFVL SDRAGSAWYIG GFFFAPVLAVLSPWP +TAVLW +I L
Sbjct 8 RSRTTESGKPLVPRWLRFVLASDRAGSAWYIGTGFFFAPVLAVLSPWPVVTAVLWGVIAL 67
Query 62 AGLWLGLLGIAMAVGLARVLRSGAEIPEAYWRTLVDY 98
AGLWLGLLGIAMAVGLAR++RSGAEIPE YWR+LV Y
Sbjct 68 AGLWLGLLGIAMAVGLARIMRSGAEIPEDYWRSLVHY 104
>gi|336457553|gb|EGO36559.1| hypothetical protein MAPs_22250 [Mycobacterium avium subsp. paratuberculosis
S397]
Length=109
Score = 122 bits (306), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/86 (85%), Positives = 79/86 (92%), Gaps = 0/86 (0%)
Query 13 IPRWLRFVLTSDRAGSAWYIGAGFFFAPVLAVLSPWPTITAVLWWIIGLAGLWLGLLGIA 72
+PRWLRFVL SDRAGSAWYIG GFFFAPVLAVLSPWP +TAVLW +I LAGLWLGLLGIA
Sbjct 24 VPRWLRFVLASDRAGSAWYIGTGFFFAPVLAVLSPWPVVTAVLWGVIALAGLWLGLLGIA 83
Query 73 MAVGLARVLRSGAEIPEAYWRTLVDY 98
MAVGLAR++RSGAEIPE YWR+LV Y
Sbjct 84 MAVGLARIMRSGAEIPEDYWRSLVHY 109
>gi|41407714|ref|NP_960550.1| hypothetical protein MAP1616 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41396067|gb|AAS03933.1| hypothetical protein MAP_1616 [Mycobacterium avium subsp. paratuberculosis
K-10]
Length=104
Score = 122 bits (305), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/86 (85%), Positives = 79/86 (92%), Gaps = 0/86 (0%)
Query 13 IPRWLRFVLTSDRAGSAWYIGAGFFFAPVLAVLSPWPTITAVLWWIIGLAGLWLGLLGIA 72
+PRWLRFVL SDRAGSAWYIG GFFFAPVLAVLSPWP +TAVLW +I LAGLWLGLLGIA
Sbjct 19 VPRWLRFVLASDRAGSAWYIGTGFFFAPVLAVLSPWPVVTAVLWGVIALAGLWLGLLGIA 78
Query 73 MAVGLARVLRSGAEIPEAYWRTLVDY 98
MAVGLAR++RSGAEIPE YWR+LV Y
Sbjct 79 MAVGLARIMRSGAEIPEDYWRSLVHY 104
>gi|118463564|ref|YP_881996.1| hypothetical protein MAV_2809 [Mycobacterium avium 104]
gi|118164851|gb|ABK65748.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=109
Score = 120 bits (302), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 72/86 (84%), Positives = 79/86 (92%), Gaps = 0/86 (0%)
Query 13 IPRWLRFVLTSDRAGSAWYIGAGFFFAPVLAVLSPWPTITAVLWWIIGLAGLWLGLLGIA 72
+PRWLRFVL SDRAGSAWYIG GFFFAPVLAVLSPWP +TAVLW +I LAGLWLGLLGIA
Sbjct 24 VPRWLRFVLASDRAGSAWYIGTGFFFAPVLAVLSPWPVVTAVLWGVIALAGLWLGLLGIA 83
Query 73 MAVGLARVLRSGAEIPEAYWRTLVDY 98
MAVGLAR++RSGAEIP+ YWR+LV Y
Sbjct 84 MAVGLARIMRSGAEIPDDYWRSLVHY 109
>gi|118470094|ref|YP_887827.1| hypothetical protein MSMEG_3523 [Mycobacterium smegmatis str.
MC2 155]
gi|118171381|gb|ABK72277.1| probable membrane protein [Mycobacterium smegmatis str. MC2 155]
Length=139
Score = 112 bits (280), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/88 (75%), Positives = 75/88 (86%), Gaps = 0/88 (0%)
Query 10 ESPIPRWLRFVLTSDRAGSAWYIGAGFFFAPVLAVLSPWPTITAVLWWIIGLAGLWLGLL 69
PIPRWLR+VL +DRAGSAWY+G GFFFAPVLAV+SPWP +T VLW +I LAGLWLGLL
Sbjct 29 RDPIPRWLRYVLMADRAGSAWYVGTGFFFAPVLAVVSPWPVVTTVLWVVIALAGLWLGLL 88
Query 70 GIAMAVGLARVLRSGAEIPEAYWRTLVD 97
GIAMA GLA VLRS AEI E YWR+++D
Sbjct 89 GIAMATGLAMVLRSNAEISEDYWRSIID 116
>gi|126435334|ref|YP_001071025.1| hypothetical protein Mjls_2754 [Mycobacterium sp. JLS]
gi|126235134|gb|ABN98534.1| conserved hypothetical protein [Mycobacterium sp. JLS]
Length=115
Score = 110 bits (276), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 69/86 (81%), Positives = 76/86 (89%), Gaps = 0/86 (0%)
Query 13 IPRWLRFVLTSDRAGSAWYIGAGFFFAPVLAVLSPWPTITAVLWWIIGLAGLWLGLLGIA 72
IPRWLRFVL SDRAGSAWYIGAGFFFAP LA++SPWP +TA LW +IGLAGLWLGLLGIA
Sbjct 8 IPRWLRFVLASDRAGSAWYIGAGFFFAPALALVSPWPALTAALWVLIGLAGLWLGLLGIA 67
Query 73 MAVGLARVLRSGAEIPEAYWRTLVDY 98
MA GLA VLRS EIPE YWR+++DY
Sbjct 68 MATGLAIVLRSNTEIPEDYWRSIIDY 93
>gi|262204408|ref|YP_003275616.1| hypothetical protein Gbro_4592 [Gordonia bronchialis DSM 43247]
gi|262087755|gb|ACY23723.1| hypothetical protein Gbro_4592 [Gordonia bronchialis DSM 43247]
Length=117
Score = 110 bits (276), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 54/91 (60%), Positives = 70/91 (77%), Gaps = 1/91 (1%)
Query 8 PTESPIPRWLRFVLTSDRAGSAWYIGAGFFFAPVLAVLSPWPTITAVLWWIIGLAGLWLG 67
PTES PRWL VL DRAGSAW+IGAGFFFAP+L +L PWP + + W +I L+GLWLG
Sbjct 20 PTESS-PRWLTLVLRCDRAGSAWFIGAGFFFAPLLLILDPWPVMVIIAWTVIALSGLWLG 78
Query 68 LLGIAMAVGLARVLRSGAEIPEAYWRTLVDY 98
+LG+ +A+GL RVLR+G IP++YW L+ +
Sbjct 79 VLGVFIAIGLGRVLRAGETIPDSYWWQLLGH 109
>gi|120403995|ref|YP_953824.1| hypothetical protein Mvan_3013 [Mycobacterium vanbaalenii PYR-1]
gi|119956813|gb|ABM13818.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1]
Length=102
Score = 110 bits (274), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 67/97 (70%), Positives = 78/97 (81%), Gaps = 1/97 (1%)
Query 3 MCEGRPT-ESPIPRWLRFVLTSDRAGSAWYIGAGFFFAPVLAVLSPWPTITAVLWWIIGL 61
MC P+ + PIPRWLR VL DR GS+WYIGAGFFFAPVLA++SPWP +TA LW I L
Sbjct 1 MCPREPSVDVPIPRWLRVVLICDRTGSSWYIGAGFFFAPVLALVSPWPALTAALWVFIAL 60
Query 62 AGLWLGLLGIAMAVGLARVLRSGAEIPEAYWRTLVDY 98
AGLWLGLLG+AMA GLA VLRS EIPE YWR++++Y
Sbjct 61 AGLWLGLLGVAMATGLAVVLRSNTEIPEDYWRSILEY 97
>gi|108799690|ref|YP_639887.1| hypothetical protein Mmcs_2724 [Mycobacterium sp. MCS]
gi|119868800|ref|YP_938752.1| hypothetical protein Mkms_2768 [Mycobacterium sp. KMS]
gi|108770109|gb|ABG08831.1| hypothetical protein Mmcs_2724 [Mycobacterium sp. MCS]
gi|119694889|gb|ABL91962.1| conserved hypothetical protein [Mycobacterium sp. KMS]
Length=115
Score = 109 bits (273), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/86 (80%), Positives = 75/86 (88%), Gaps = 0/86 (0%)
Query 13 IPRWLRFVLTSDRAGSAWYIGAGFFFAPVLAVLSPWPTITAVLWWIIGLAGLWLGLLGIA 72
IPRWLRFVL SDRAGSAWYIGAGFFFAP LA++SPWP +T LW +IGLAGLWLGLLGIA
Sbjct 8 IPRWLRFVLASDRAGSAWYIGAGFFFAPALALVSPWPALTTALWVLIGLAGLWLGLLGIA 67
Query 73 MAVGLARVLRSGAEIPEAYWRTLVDY 98
MA GLA VLRS EIPE YWR+++DY
Sbjct 68 MATGLAIVLRSNTEIPEDYWRSIIDY 93
>gi|343928683|ref|ZP_08768128.1| hypothetical protein GOALK_120_01110 [Gordonia alkanivorans NBRC
16433]
gi|343761432|dbj|GAA15054.1| hypothetical protein GOALK_120_01110 [Gordonia alkanivorans NBRC
16433]
Length=111
Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/92 (64%), Positives = 66/92 (72%), Gaps = 1/92 (1%)
Query 8 PTESPIPRWLRFVLTSDRAGSAWYIGAGFFFAPVLAVLSPWPTITAVLWWIIGLAGLWLG 67
PT S PRWL V DRA S+W+IGAGFFFAP+L +L PWP AV W I LAGLWLG
Sbjct 19 PTAS-TPRWLVAVARCDRALSSWFIGAGFFFAPILLILDPWPIAVAVAWTAISLAGLWLG 77
Query 68 LLGIAMAVGLARVLRSGAEIPEAYWRTLVDYR 99
LLG MA GLARVLR+G IP+ +W L+DYR
Sbjct 78 LLGAFMAAGLARVLRAGDVIPDEFWVGLLDYR 109
>gi|342859541|ref|ZP_08716194.1| hypothetical protein MCOL_11698 [Mycobacterium colombiense CECT
3035]
gi|342132673|gb|EGT85893.1| hypothetical protein MCOL_11698 [Mycobacterium colombiense CECT
3035]
Length=58
Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/58 (78%), Positives = 53/58 (92%), Gaps = 0/58 (0%)
Query 41 VLAVLSPWPTITAVLWWIIGLAGLWLGLLGIAMAVGLARVLRSGAEIPEAYWRTLVDY 98
+LA+LSPWPT+TAVLW +I LAGLWLGLLGIAMA GLAR++RSGAEIP+ YWR+LV Y
Sbjct 1 MLAMLSPWPTVTAVLWGVIALAGLWLGLLGIAMAAGLARIMRSGAEIPDDYWRSLVHY 58
>gi|336469539|gb|EGO57701.1| hypothetical protein NEUTE1DRAFT_81506 [Neurospora tetrasperma
FGSC 2508]
Length=1053
Score = 37.0 bits (84), Expect = 0.84, Method: Composition-based stats.
Identities = 21/59 (36%), Positives = 30/59 (51%), Gaps = 3/59 (5%)
Query 33 GAGFFFAPVLAVLSPW---PTITAVLWWIIGLAGLWLGLLGIAMAVGLARVLRSGAEIP 88
G+ FF+ VL L W P I + W++GL G + LL A+ V +R GA+ P
Sbjct 139 GSAFFYVYVLITLFDWEHSPNIVHFITWVLGLGGEIVVLLSFALIVTGSRYSTLGAQDP 197
>gi|342213880|ref|ZP_08706599.1| 6-phosphogluconolactonase [Veillonella sp. oral taxon 780 str.
F0422]
gi|341597468|gb|EGS40027.1| 6-phosphogluconolactonase [Veillonella sp. oral taxon 780 str.
F0422]
Length=249
Score = 35.4 bits (80), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 15/51 (30%), Positives = 23/51 (46%), Gaps = 0/51 (0%)
Query 48 WPTITAVLWWIIGLAGLWLGLLGIAMAVGLARVLRSGAEIPEAYWRTLVDY 98
W +T ++ +W ++G + LARVLR E E W VD+
Sbjct 176 WERVTLTFPMLVNAKSVWFTVVGASKEAALARVLRQRKEYEEYSWEDRVDH 226
>gi|164428745|ref|XP_956997.2| hypothetical protein NCU00010 [Neurospora crassa OR74A]
gi|157072262|gb|EAA27761.2| hypothetical protein NCU00010 [Neurospora crassa OR74A]
Length=1028
Score = 35.0 bits (79), Expect = 3.8, Method: Composition-based stats.
Identities = 20/59 (34%), Positives = 29/59 (50%), Gaps = 3/59 (5%)
Query 33 GAGFFFAPVLAVLSPW---PTITAVLWWIIGLAGLWLGLLGIAMAVGLARVLRSGAEIP 88
G+ FF+ VL L W P I + W++GL G + LL A+ V + GA+ P
Sbjct 139 GSAFFYVYVLITLFDWEHSPNIVHFITWVLGLGGEIVVLLSFALIVTGSHYSNFGAQDP 197
Lambda K H
0.327 0.141 0.489
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 127822873252
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40