BLASTP 2.2.25+


Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           15,229,318 sequences; 5,219,829,388 total letters



Query= Rv1906c

Length=156
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|15841377|ref|NP_336414.1|  hypothetical protein MT1957 [Mycoba...   308    1e-82
gi|15609043|ref|NP_216422.1|  hypothetical protein Rv1906c [Mycob...   308    2e-82
gi|339294841|gb|AEJ46952.1|  hypothetical protein CCDC5079_1762 [...   258    2e-67
gi|240172583|ref|ZP_04751242.1|  hypothetical protein MkanA1_2493...   213    6e-54
gi|15828088|ref|NP_302351.1|  lipoprotein [Mycobacterium leprae T...   184    5e-45
gi|183982808|ref|YP_001851099.1|  hypothetical protein MMAR_2802 ...   178    2e-43
gi|118618336|ref|YP_906668.1|  hypothetical protein MUL_2927 [Myc...   176    8e-43
gi|342859558|ref|ZP_08716211.1|  hypothetical protein MCOL_11783 ...   139    2e-31
gi|41407728|ref|NP_960564.1|  hypothetical protein MAP1630c [Myco...   135    3e-30
gi|118464436|ref|YP_881982.1|  hypothetical protein MAV_2795 [Myc...   131    3e-29
gi|336457388|gb|EGO36397.1|  hypothetical protein MAPs_22530 [Myc...   131    4e-29
gi|296164931|ref|ZP_06847487.1|  conserved hypothetical protein [...   129    2e-28
gi|254775275|ref|ZP_05216791.1|  hypothetical protein MaviaA2_114...   113    7e-24
gi|254821873|ref|ZP_05226874.1|  hypothetical protein MintA_18207...   109    2e-22
gi|118471492|ref|YP_887795.1|  hypothetical protein MSMEG_3491 [M...   103    7e-21
gi|145221660|ref|YP_001132338.1|  hypothetical protein Mflv_1068 ...   100    1e-19
gi|126438120|ref|YP_001073811.1|  hypothetical protein Mjls_5557 ...  94.7    4e-18
gi|108802139|ref|YP_642336.1|  hypothetical protein Mmcs_5176 [My...  93.2    1e-17
gi|333992833|ref|YP_004525447.1|  hypothetical protein JDM601_419...  92.4    2e-17
gi|120406698|ref|YP_956527.1|  hypothetical protein Mvan_5756 [My...  90.5    7e-17
gi|118616960|ref|YP_905292.1|  hypothetical protein MUL_1252 [Myc...  71.2    5e-11
gi|183983592|ref|YP_001851883.1|  hypothetical protein MMAR_3613 ...  70.9    6e-11
gi|342857900|ref|ZP_08714556.1|  hypothetical protein MCOL_03460 ...  69.3    2e-10
gi|240170959|ref|ZP_04749618.1|  hypothetical protein MkanA1_1673...  68.2    4e-10
gi|297157986|gb|ADI07698.1|  hypothetical protein SBI_04578 [Stre...  67.8    5e-10
gi|254823128|ref|ZP_05228129.1|  hypothetical protein MintA_24580...  67.8    5e-10
gi|240167884|ref|ZP_04746543.1|  hypothetical protein MkanA1_0111...  66.6    1e-09
gi|336460995|gb|EGO39875.1|  hypothetical protein MAPs_34340 [Myc...  63.5    9e-09
gi|269836269|ref|YP_003318497.1|  hypothetical protein Sthe_0236 ...  63.2    1e-08
gi|258651339|ref|YP_003200495.1|  hypothetical protein Namu_1099 ...  63.2    1e-08
gi|118466415|ref|YP_880895.1|  hypothetical protein MAV_1662 [Myc...  60.1    1e-07
gi|41408419|ref|NP_961255.1|  hypothetical protein MAP2321 [Mycob...  60.1    1e-07
gi|254774489|ref|ZP_05216005.1|  hypothetical protein MaviaA2_074...  60.1    1e-07
gi|302534876|ref|ZP_07287218.1|  predicted protein [Streptomyces ...  59.3    2e-07
gi|297190749|ref|ZP_06908147.1|  predicted protein [Streptomyces ...  58.5    3e-07
gi|15608492|ref|NP_215868.1|  hypothetical protein Rv1352 [Mycoba...  55.8    2e-06
gi|269794246|ref|YP_003313701.1|  hypothetical protein Sked_09170...  54.3    6e-06
gi|118472896|ref|YP_885966.1|  hypothetical protein MSMEG_1588 [M...  53.1    1e-05
gi|183983957|ref|YP_001852248.1|  hypothetical protein MMAR_3985 ...  52.4    2e-05
gi|118619072|ref|YP_907404.1|  hypothetical protein MUL_3846 [Myc...  51.2    5e-05
gi|342857983|ref|ZP_08714639.1|  hypothetical protein MCOL_03875 ...  51.2    5e-05
gi|183983999|ref|YP_001852290.1|  hypothetical protein MMAR_4028 ...  50.4    8e-05
gi|260907602|ref|ZP_05915924.1|  hypothetical protein BlinB_19857...  48.9    3e-04
gi|334336394|ref|YP_004541546.1|  hypothetical protein Isova_0868...  48.5    3e-04
gi|118619107|ref|YP_907439.1|  hypothetical protein MUL_3893 [Myc...  48.1    4e-04
gi|145225497|ref|YP_001136175.1|  hypothetical protein Mflv_4921 ...  47.0    9e-04
gi|120402508|ref|YP_952337.1|  hypothetical protein Mvan_1499 [My...  47.0    0.001
gi|254819192|ref|ZP_05224193.1|  hypothetical protein MintA_04659...  44.7    0.005
gi|261736091|ref|YP_003257433.1|  hypothetical protein pZL12.69 [...  44.3    0.005
gi|41408501|ref|NP_961337.1|  hypothetical protein MAP2403c [Myco...  44.3    0.006


>gi|15841377|ref|NP_336414.1| hypothetical protein MT1957 [Mycobacterium tuberculosis CDC1551]
 gi|167970394|ref|ZP_02552671.1| hypothetical protein MtubH3_21128 [Mycobacterium tuberculosis 
H37Ra]
 gi|254232082|ref|ZP_04925409.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
 27 more sequence titles
 Length=157

 Score =  308 bits (790),  Expect = 1e-82, Method: Compositional matrix adjust.
 Identities = 156/156 (100%), Positives = 156/156 (100%), Gaps = 0/156 (0%)

Query  1    MRLKPAPSPAAAFAVAGLILAGWAGSVGLAGADPEPAPTPKTAIDSDGTYAVGIDIAPGT  60
            MRLKPAPSPAAAFAVAGLILAGWAGSVGLAGADPEPAPTPKTAIDSDGTYAVGIDIAPGT
Sbjct  2    MRLKPAPSPAAAFAVAGLILAGWAGSVGLAGADPEPAPTPKTAIDSDGTYAVGIDIAPGT  61

Query  61   YSSAGPVGDGTCYWKRMGNPDGALIDNALSKKPQVVTIEPTDKAFKTHGCQPWQNTGSEG  120
            YSSAGPVGDGTCYWKRMGNPDGALIDNALSKKPQVVTIEPTDKAFKTHGCQPWQNTGSEG
Sbjct  62   YSSAGPVGDGTCYWKRMGNPDGALIDNALSKKPQVVTIEPTDKAFKTHGCQPWQNTGSEG  121

Query  121  AAPAGVPGPEAGAQLQNQLGILNGLLGPTGGRVPQP  156
            AAPAGVPGPEAGAQLQNQLGILNGLLGPTGGRVPQP
Sbjct  122  AAPAGVPGPEAGAQLQNQLGILNGLLGPTGGRVPQP  157


>gi|15609043|ref|NP_216422.1| hypothetical protein Rv1906c [Mycobacterium tuberculosis H37Rv]
 gi|31793099|ref|NP_855592.1| hypothetical protein Mb1941c [Mycobacterium bovis AF2122/97]
 gi|121637812|ref|YP_978035.1| hypothetical protein BCG_1945c [Mycobacterium bovis BCG str. 
Pasteur 1173P2]
 48 more sequence titles
 Length=156

 Score =  308 bits (789),  Expect = 2e-82, Method: Compositional matrix adjust.
 Identities = 156/156 (100%), Positives = 156/156 (100%), Gaps = 0/156 (0%)

Query  1    MRLKPAPSPAAAFAVAGLILAGWAGSVGLAGADPEPAPTPKTAIDSDGTYAVGIDIAPGT  60
            MRLKPAPSPAAAFAVAGLILAGWAGSVGLAGADPEPAPTPKTAIDSDGTYAVGIDIAPGT
Sbjct  1    MRLKPAPSPAAAFAVAGLILAGWAGSVGLAGADPEPAPTPKTAIDSDGTYAVGIDIAPGT  60

Query  61   YSSAGPVGDGTCYWKRMGNPDGALIDNALSKKPQVVTIEPTDKAFKTHGCQPWQNTGSEG  120
            YSSAGPVGDGTCYWKRMGNPDGALIDNALSKKPQVVTIEPTDKAFKTHGCQPWQNTGSEG
Sbjct  61   YSSAGPVGDGTCYWKRMGNPDGALIDNALSKKPQVVTIEPTDKAFKTHGCQPWQNTGSEG  120

Query  121  AAPAGVPGPEAGAQLQNQLGILNGLLGPTGGRVPQP  156
            AAPAGVPGPEAGAQLQNQLGILNGLLGPTGGRVPQP
Sbjct  121  AAPAGVPGPEAGAQLQNQLGILNGLLGPTGGRVPQP  156


>gi|339294841|gb|AEJ46952.1| hypothetical protein CCDC5079_1762 [Mycobacterium tuberculosis 
CCDC5079]
 gi|339298466|gb|AEJ50576.1| hypothetical protein CCDC5180_1739 [Mycobacterium tuberculosis 
CCDC5180]
Length=130

 Score =  258 bits (660),  Expect = 2e-67, Method: Compositional matrix adjust.
 Identities = 129/130 (99%), Positives = 130/130 (100%), Gaps = 0/130 (0%)

Query  27   VGLAGADPEPAPTPKTAIDSDGTYAVGIDIAPGTYSSAGPVGDGTCYWKRMGNPDGALID  86
            +GLAGADPEPAPTPKTAIDSDGTYAVGIDIAPGTYSSAGPVGDGTCYWKRMGNPDGALID
Sbjct  1    MGLAGADPEPAPTPKTAIDSDGTYAVGIDIAPGTYSSAGPVGDGTCYWKRMGNPDGALID  60

Query  87   NALSKKPQVVTIEPTDKAFKTHGCQPWQNTGSEGAAPAGVPGPEAGAQLQNQLGILNGLL  146
            NALSKKPQVVTIEPTDKAFKTHGCQPWQNTGSEGAAPAGVPGPEAGAQLQNQLGILNGLL
Sbjct  61   NALSKKPQVVTIEPTDKAFKTHGCQPWQNTGSEGAAPAGVPGPEAGAQLQNQLGILNGLL  120

Query  147  GPTGGRVPQP  156
            GPTGGRVPQP
Sbjct  121  GPTGGRVPQP  130


>gi|240172583|ref|ZP_04751242.1| hypothetical protein MkanA1_24935 [Mycobacterium kansasii ATCC 
12478]
Length=154

 Score =  213 bits (543),  Expect = 6e-54, Method: Compositional matrix adjust.
 Identities = 119/150 (80%), Positives = 127/150 (85%), Gaps = 3/150 (2%)

Query  8    SPAAAFAVAGLILAGWAGSVGLAGADPEPAPTP--KTAIDSDGTYAVGIDIAPGTYSSAG  65
            +PAA F VAGLILAGWAGS G+A ADP+PAP    KT ID DGTY VG DIAPGTYSSAG
Sbjct  5    APAARFLVAGLILAGWAGSAGVAAADPQPAPPSAPKTTIDHDGTYTVGTDIAPGTYSSAG  64

Query  66   PVGDGTCYWKRMGNPDGALIDNALSKKPQVVTIEPTDKAFKTHGCQPWQNTGSEGAAPAG  125
            PVG+GTCYWKR+GNP+GAL+DNALSKKPQVV IEPTDKAF+T GCQPWQ TG EG APA 
Sbjct  65   PVGNGTCYWKRLGNPEGALLDNALSKKPQVVQIEPTDKAFRTSGCQPWQITG-EGTAPAE  123

Query  126  VPGPEAGAQLQNQLGILNGLLGPTGGRVPQ  155
            VPGP AGAQLQ  L ILNGLLGPTG RVPQ
Sbjct  124  VPGPAAGAQLQTDLAILNGLLGPTGQRVPQ  153


>gi|15828088|ref|NP_302351.1| lipoprotein [Mycobacterium leprae TN]
 gi|221230565|ref|YP_002503981.1| putative lipoprotein [Mycobacterium leprae Br4923]
 gi|2276321|emb|CAA04160.1| putative lipoprotein [Mycobacterium leprae]
 gi|4582356|emb|CAB40304.1| hypothetical protein MLCL672.01 [Mycobacterium leprae]
 gi|13093642|emb|CAC30965.1| putative lipoprotein [Mycobacterium leprae]
 gi|219933672|emb|CAR72107.1| putative lipoprotein [Mycobacterium leprae Br4923]
Length=153

 Score =  184 bits (466),  Expect = 5e-45, Method: Compositional matrix adjust.
 Identities = 98/155 (64%), Positives = 114/155 (74%), Gaps = 3/155 (1%)

Query  1    MRLKPAPSPAAAFAVAGLILAGWAGSVGLAGADPEPAPTPKTAIDSDGTYAVGIDIAPGT  60
            M L  AP+ AA F VA +I A  A S G+AGADP+    PKT ID DGTYAVG DIAPGT
Sbjct  1    MWLTAAPA-AARFVVASVIAASCAASTGVAGADPQSPSAPKTTIDHDGTYAVGTDIAPGT  59

Query  61   YSSAGPVGDGTCYWKRMGNPDGALIDNALSKKPQVVTIEPTDKAFKTHGCQPWQNTGSEG  120
            YSSAGPVG+GTCYWKR+ NPDG  IDNA+SKKP++V IE ++KAFKT GCQPWQ T S  
Sbjct  60   YSSAGPVGNGTCYWKRIDNPDGP-IDNAMSKKPKIVQIEASNKAFKTTGCQPWQQT-SNT  117

Query  121  AAPAGVPGPEAGAQLQNQLGILNGLLGPTGGRVPQ  155
                 +PGP AG QL++ LGILNGLL   G +VP+
Sbjct  118  TVSTDLPGPIAGIQLESNLGILNGLLASNGQQVPR  152


>gi|183982808|ref|YP_001851099.1| hypothetical protein MMAR_2802 [Mycobacterium marinum M]
 gi|183176134|gb|ACC41244.1| conserved membrane protein [Mycobacterium marinum M]
Length=172

 Score =  178 bits (452),  Expect = 2e-43, Method: Compositional matrix adjust.
 Identities = 87/114 (77%), Positives = 95/114 (84%), Gaps = 1/114 (0%)

Query  41   KTAIDSDGTYAVGIDIAPGTYSSAGPVGDGTCYWKRMGNPDGALIDNALSKKPQVVTIEP  100
            KT +D DGTYAVG DIAPGTY+SAGPVGDGTCYWKRM NPDGALIDNA++KKPQVV IEP
Sbjct  58   KTTMDHDGTYAVGTDIAPGTYTSAGPVGDGTCYWKRMSNPDGALIDNAMTKKPQVVQIEP  117

Query  101  TDKAFKTHGCQPWQNTGSEGAAPAGVPGPEAGAQLQNQLGILNGLLGPTGGRVP  154
            TDKAFKT GCQPWQ+T  +   PA +PGP AG QLQ  LGILNGLL P G +VP
Sbjct  118  TDKAFKTSGCQPWQST-PDADVPAELPGPAAGGQLQMNLGILNGLLAPNGQQVP  170


>gi|118618336|ref|YP_906668.1| hypothetical protein MUL_2927 [Mycobacterium ulcerans Agy99]
 gi|118570446|gb|ABL05197.1| conserved membrane protein [Mycobacterium ulcerans Agy99]
Length=155

 Score =  176 bits (447),  Expect = 8e-43, Method: Compositional matrix adjust.
 Identities = 86/114 (76%), Positives = 94/114 (83%), Gaps = 1/114 (0%)

Query  41   KTAIDSDGTYAVGIDIAPGTYSSAGPVGDGTCYWKRMGNPDGALIDNALSKKPQVVTIEP  100
            KT +D DGTYAVG DI PGTY+SAGPVGDGTCYWKRM NPDGALIDNA++KKPQVV IEP
Sbjct  41   KTTMDHDGTYAVGTDIVPGTYTSAGPVGDGTCYWKRMSNPDGALIDNAMTKKPQVVQIEP  100

Query  101  TDKAFKTHGCQPWQNTGSEGAAPAGVPGPEAGAQLQNQLGILNGLLGPTGGRVP  154
            TDKAFKT GCQPWQ+T  +   PA +PGP AG QLQ  LGILNGLL P G +VP
Sbjct  101  TDKAFKTSGCQPWQST-PDADVPAELPGPAAGGQLQMNLGILNGLLAPNGQQVP  153


>gi|342859558|ref|ZP_08716211.1| hypothetical protein MCOL_11783 [Mycobacterium colombiense CECT 
3035]
 gi|342132690|gb|EGT85910.1| hypothetical protein MCOL_11783 [Mycobacterium colombiense CECT 
3035]
Length=209

 Score =  139 bits (349),  Expect = 2e-31, Method: Compositional matrix adjust.
 Identities = 75/111 (68%), Positives = 80/111 (73%), Gaps = 11/111 (9%)

Query  40   PKTAIDSDGTYAVGIDIAPGTYSSAGPVGDGTCYWKRMGNPDGALIDNALSKKPQVVTIE  99
            PKT+ID DG YAVG DI PG YSS GPV +GTCYWKRM NPDGALIDNA+SKKPQVV I+
Sbjct  56   PKTSIDKDGIYAVGTDIVPGIYSSGGPVDNGTCYWKRMSNPDGALIDNAMSKKPQVVQID  115

Query  100  PTDKAFKTHGCQPWQNTGSEGAAPAGVP---GPEAGAQLQNQLGILNGLLG  147
              DKAFKT GCQPWQ T      P  VP    P AG  +Q  LGILN LLG
Sbjct  116  AGDKAFKTSGCQPWQLT------PDAVPPSTAPPAG--VQGTLGILNSLLG  158


>gi|41407728|ref|NP_960564.1| hypothetical protein MAP1630c [Mycobacterium avium subsp. paratuberculosis 
K-10]
 gi|41396081|gb|AAS03947.1| hypothetical protein MAP_1630c [Mycobacterium avium subsp. paratuberculosis 
K-10]
Length=208

 Score =  135 bits (339),  Expect = 3e-30, Method: Compositional matrix adjust.
 Identities = 73/135 (55%), Positives = 82/135 (61%), Gaps = 35/135 (25%)

Query  17   GLILAGWAGSVGLAGADPEPAP-----------------------------------TPK  41
            GL+ AGWA S  +AGADP+                                       PK
Sbjct  14   GLMAAGWAASTVVAGADPDETHGPAPGPAATPSPAPSTSPSPAASPSPSASPAPAPAAPK  73

Query  42   TAIDSDGTYAVGIDIAPGTYSSAGPVGDGTCYWKRMGNPDGALIDNALSKKPQVVTIEPT  101
            T ID DG YAVG DIAPG YSS GPVG+GTCYWKRMGNPDGA+IDNA++KKPQVV I+P 
Sbjct  74   TTIDKDGIYAVGTDIAPGVYSSGGPVGNGTCYWKRMGNPDGAVIDNAMTKKPQVVQIDPG  133

Query  102  DKAFKTHGCQPWQNT  116
            DK+FKT GCQPWQ T
Sbjct  134  DKSFKTSGCQPWQLT  148


>gi|118464436|ref|YP_881982.1| hypothetical protein MAV_2795 [Mycobacterium avium 104]
 gi|118165723|gb|ABK66620.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=193

 Score =  131 bits (329),  Expect = 3e-29, Method: Compositional matrix adjust.
 Identities = 60/76 (79%), Positives = 66/76 (87%), Gaps = 0/76 (0%)

Query  41   KTAIDSDGTYAVGIDIAPGTYSSAGPVGDGTCYWKRMGNPDGALIDNALSKKPQVVTIEP  100
            KT ID DG YAVG DIAPG YSS GPVG+GTCYWKRMGNPDGA+IDNA++KKPQVV I+P
Sbjct  58   KTTIDKDGIYAVGTDIAPGVYSSGGPVGNGTCYWKRMGNPDGAVIDNAMTKKPQVVQIDP  117

Query  101  TDKAFKTHGCQPWQNT  116
             DK+FKT GCQPWQ T
Sbjct  118  GDKSFKTSGCQPWQLT  133


>gi|336457388|gb|EGO36397.1| hypothetical protein MAPs_22530 [Mycobacterium avium subsp. paratuberculosis 
S397]
Length=193

 Score =  131 bits (329),  Expect = 4e-29, Method: Compositional matrix adjust.
 Identities = 60/76 (79%), Positives = 66/76 (87%), Gaps = 0/76 (0%)

Query  41   KTAIDSDGTYAVGIDIAPGTYSSAGPVGDGTCYWKRMGNPDGALIDNALSKKPQVVTIEP  100
            KT ID DG YAVG DIAPG YSS GPVG+GTCYWKRMGNPDGA+IDNA++KKPQVV I+P
Sbjct  58   KTTIDKDGIYAVGTDIAPGVYSSGGPVGNGTCYWKRMGNPDGAVIDNAMTKKPQVVQIDP  117

Query  101  TDKAFKTHGCQPWQNT  116
             DK+FKT GCQPWQ T
Sbjct  118  GDKSFKTSGCQPWQLT  133


>gi|296164931|ref|ZP_06847487.1| conserved hypothetical protein [Mycobacterium parascrofulaceum 
ATCC BAA-614]
 gi|295899773|gb|EFG79223.1| conserved hypothetical protein [Mycobacterium parascrofulaceum 
ATCC BAA-614]
Length=191

 Score =  129 bits (324),  Expect = 2e-28, Method: Compositional matrix adjust.
 Identities = 73/148 (50%), Positives = 82/148 (56%), Gaps = 44/148 (29%)

Query  13   FAVAGLILAGWAGSVGLAGADPEPAPTP--------------------------------  40
             AVAGL++AG A S G+AGADP+  P P                                
Sbjct  1    MAVAGLMIAGLAASAGVAGADPDQTPAPSPSPAASSRGPAPGPPPSSPAPSPAASSAPAP  60

Query  41   ------------KTAIDSDGTYAVGIDIAPGTYSSAGPVGDGTCYWKRMGNPDGALIDNA  88
                        KT ID DG Y VG DI PG YSS GP  +G CYWKRMGNPDG +IDN+
Sbjct  61   AASPPASPAPGPKTTIDKDGIYNVGSDIVPGIYSSGGPTDNGACYWKRMGNPDGNIIDNS  120

Query  89   LSKKPQVVTIEPTDKAFKTHGCQPWQNT  116
            +SKKPQVV I+PTDKAFKT GCQPWQ T
Sbjct  121  MSKKPQVVQIDPTDKAFKTSGCQPWQLT  148


>gi|254775275|ref|ZP_05216791.1| hypothetical protein MaviaA2_11476 [Mycobacterium avium subsp. 
avium ATCC 25291]
Length=125

 Score =  113 bits (283),  Expect = 7e-24, Method: Compositional matrix adjust.
 Identities = 51/65 (79%), Positives = 58/65 (90%), Gaps = 0/65 (0%)

Query  52   VGIDIAPGTYSSAGPVGDGTCYWKRMGNPDGALIDNALSKKPQVVTIEPTDKAFKTHGCQ  111
            +G DIAPG YSS GPVG+GTCYWKRMGNPDGA+IDNA++KKPQVV I+P DK+FKT GCQ
Sbjct  1    MGTDIAPGVYSSGGPVGNGTCYWKRMGNPDGAVIDNAMTKKPQVVQIDPGDKSFKTSGCQ  60

Query  112  PWQNT  116
            PWQ T
Sbjct  61   PWQLT  65


>gi|254821873|ref|ZP_05226874.1| hypothetical protein MintA_18207 [Mycobacterium intracellulare 
ATCC 13950]
Length=124

 Score =  109 bits (272),  Expect = 2e-22, Method: Compositional matrix adjust.
 Identities = 50/65 (77%), Positives = 55/65 (85%), Gaps = 0/65 (0%)

Query  52   VGIDIAPGTYSSAGPVGDGTCYWKRMGNPDGALIDNALSKKPQVVTIEPTDKAFKTHGCQ  111
            +G DI PG YSS GPVG+GTCYWKR GNPDGALIDNA++KK QVV I+P DKAFKT GCQ
Sbjct  1    MGTDIVPGIYSSGGPVGNGTCYWKRTGNPDGALIDNAMTKKAQVVQIDPGDKAFKTSGCQ  60

Query  112  PWQNT  116
            PWQ T
Sbjct  61   PWQLT  65


>gi|118471492|ref|YP_887795.1| hypothetical protein MSMEG_3491 [Mycobacterium smegmatis str. 
MC2 155]
 gi|118172779|gb|ABK73675.1| conserved hypothetical protein [Mycobacterium smegmatis str. 
MC2 155]
Length=166

 Score =  103 bits (258),  Expect = 7e-21, Method: Compositional matrix adjust.
 Identities = 61/123 (50%), Positives = 72/123 (59%), Gaps = 9/123 (7%)

Query  43   AIDSDGTYAVGIDIAPGTYSSAGPVGDGTCYWKRMGNPDGA-LIDNALSKKPQVVTIEPT  101
             +D DG Y VG DI PGTY++ GP    TCYWKRM +  G  +IDNA +KKP VV IE T
Sbjct  44   VMDHDGIYVVGTDIQPGTYATGGPADGQTCYWKRMADLHGGDIIDNAFTKKPDVVQIEAT  103

Query  102  DKAFKTHGCQPWQNTGSEGA-------APAGVPGPEAGAQLQNQLG-ILNGLLGPTGGRV  153
            DKAFKT GCQPW  T +          AP  +PG  A A+L+  L  I NG     G +V
Sbjct  104  DKAFKTSGCQPWTQTTAAPTDTPTGEGAPGDLPGLLAKAKLRTWLDTINNGARQYDGSQV  163

Query  154  PQP  156
            P P
Sbjct  164  PLP  166


>gi|145221660|ref|YP_001132338.1| hypothetical protein Mflv_1068 [Mycobacterium gilvum PYR-GCK]
 gi|315446602|ref|YP_004079481.1| hypothetical protein Mspyr1_51200 [Mycobacterium sp. Spyr1]
 gi|145214146|gb|ABP43550.1| conserved hypothetical protein [Mycobacterium gilvum PYR-GCK]
 gi|315264905|gb|ADU01647.1| hypothetical protein Mspyr1_51200 [Mycobacterium sp. Spyr1]
Length=145

 Score =  100 bits (248),  Expect = 1e-19, Method: Compositional matrix adjust.
 Identities = 51/95 (54%), Positives = 60/95 (64%), Gaps = 7/95 (7%)

Query  29   LAGADPEPAPTP-----KTAIDSDGTYAVGIDIAPGTYSSAGPVGDGTCYWKRMGNPDGA  83
            +A A PEP P P     KT ID+ G+YAVG +I PG Y SAGPV DG CYWKR+   +  
Sbjct  23   VASAQPEPTPAPDAEGPKTTIDASGSYAVGTEILPGVYQSAGPVDDGACYWKRVAGEE--  80

Query  84   LIDNALSKKPQVVTIEPTDKAFKTHGCQPWQNTGS  118
            L+DNAL+KKP  V I PTD  F T  CQ W  T +
Sbjct  81   LVDNALTKKPAFVQIMPTDTTFTTSDCQAWTLTNA  115


>gi|126438120|ref|YP_001073811.1| hypothetical protein Mjls_5557 [Mycobacterium sp. JLS]
 gi|126237920|gb|ABO01321.1| hypothetical protein Mjls_5557 [Mycobacterium sp. JLS]
Length=148

 Score = 94.7 bits (234),  Expect = 4e-18, Method: Compositional matrix adjust.
 Identities = 58/114 (51%), Positives = 71/114 (63%), Gaps = 7/114 (6%)

Query  42   TAIDSDGTYAVGIDIAPGTYSSAGPVGDG-TCYWKRMGNPDGALIDNALSKKPQVVTIEP  100
            + ID DGTY VG+DI PGTY +AG  GDG TCYWKR+G  DG L+DNAL+KK   V IE 
Sbjct  41   STIDKDGTYKVGVDILPGTY-NAGASGDGMTCYWKRVG-ADGKLLDNALTKKAASVRIEA  98

Query  101  TDKAFKTHGCQPWQNTGSEGAAPAGVPGPEAGAQLQNQLGILNGLLGPTGGRVP  154
            TD +F T+ CQ WQ   + G A    P P    ++  QLG   G+LG   G +P
Sbjct  99   TDASFTTNDCQTWQ-LAACGTACPPPPPPPGPLEMLGQLG---GMLGRAKGPMP  148


>gi|108802139|ref|YP_642336.1| hypothetical protein Mmcs_5176 [Mycobacterium sp. MCS]
 gi|119871292|ref|YP_941244.1| hypothetical protein Mkms_5265 [Mycobacterium sp. KMS]
 gi|108772558|gb|ABG11280.1| conserved hypothetical protein [Mycobacterium sp. MCS]
 gi|119697381|gb|ABL94454.1| conserved hypothetical protein [Mycobacterium sp. KMS]
Length=148

 Score = 93.2 bits (230),  Expect = 1e-17, Method: Compositional matrix adjust.
 Identities = 57/114 (50%), Positives = 71/114 (63%), Gaps = 7/114 (6%)

Query  42   TAIDSDGTYAVGIDIAPGTYSSAGPVGDG-TCYWKRMGNPDGALIDNALSKKPQVVTIEP  100
            + I+ DGTY VG+DI PGTY+ AG  GDG TCYWKR+G  DG L+DNAL+KK   V IE 
Sbjct  41   STIEKDGTYKVGVDILPGTYN-AGASGDGMTCYWKRVG-ADGKLLDNALTKKAASVRIEA  98

Query  101  TDKAFKTHGCQPWQNTGSEGAAPAGVPGPEAGAQLQNQLGILNGLLGPTGGRVP  154
            TD +F T+ CQ WQ   + G A    P P    ++  QLG   G+LG   G +P
Sbjct  99   TDASFTTNDCQTWQ-LAACGTACPPPPPPPGPLEMLGQLG---GMLGRAKGPMP  148


>gi|333992833|ref|YP_004525447.1| hypothetical protein JDM601_4193 [Mycobacterium sp. JDM601]
 gi|333488801|gb|AEF38193.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=147

 Score = 92.4 bits (228),  Expect = 2e-17, Method: Compositional matrix adjust.
 Identities = 49/106 (47%), Positives = 63/106 (60%), Gaps = 8/106 (7%)

Query  41   KTAIDSDGTYAVGIDIAPGTYSSAGPVGDGTCYWKRMGNPDGALIDNALSKKPQVVTIEP  100
            K  ID+DGT+ VG DIAPGTY S GP     CYW+R  N    ++D+A++KKPQVV IEP
Sbjct  35   KQVIDTDGTFTVGKDIAPGTYRSDGPREGNACYWRR--NSGDKIVDSAMTKKPQVVLIEP  92

Query  101  TDKAFKTHGCQPWQNTGSEGAAPAGVPGPEAGAQLQNQLGILNGLL  146
            +D  F+T  C PWQ T      P   P P+  A L +   +L G +
Sbjct  93   SDTTFRTDRCAPWQLT---ECPPTCAPVPQQSAGLPD---VLKGFV  132


>gi|120406698|ref|YP_956527.1| hypothetical protein Mvan_5756 [Mycobacterium vanbaalenii PYR-1]
 gi|119959516|gb|ABM16521.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1]
Length=151

 Score = 90.5 bits (223),  Expect = 7e-17, Method: Compositional matrix adjust.
 Identities = 42/78 (54%), Positives = 51/78 (66%), Gaps = 2/78 (2%)

Query  41   KTAIDSDGTYAVGIDIAPGTYSSAGPVGDGTCYWKRMGNPDGALIDNALSKKPQVVTIEP  100
            KT ID++G+YAVG +IAPG Y SAGP+  G CYWKR    +   +DN L+KKP  V I P
Sbjct  47   KTTIDANGSYAVGTEIAPGVYQSAGPIDGGACYWKRTAGEE--TVDNRLTKKPSFVQIMP  104

Query  101  TDKAFKTHGCQPWQNTGS  118
            TD  F T  CQ WQ T +
Sbjct  105  TDTTFTTSDCQTWQLTNA  122


>gi|118616960|ref|YP_905292.1| hypothetical protein MUL_1252 [Mycobacterium ulcerans Agy99]
 gi|118569070|gb|ABL03821.1| conserved hypothetical secreted protein [Mycobacterium ulcerans 
Agy99]
Length=257

 Score = 71.2 bits (173),  Expect = 5e-11, Method: Compositional matrix adjust.
 Identities = 39/77 (51%), Positives = 46/77 (60%), Gaps = 6/77 (7%)

Query  40   PKTAIDSDGTYAVGIDIAPGTYSSAGPVGDGTCYWKRMGNPDGAL---IDNALSKKPQVV  96
            P + I  DGT+ VG+DI  GTY SAG  GD +CYW+R+    G L   I N     PQVV
Sbjct  73   PASGIPGDGTFRVGVDIKAGTYRSAG--GD-SCYWERLRGVGGTLDEVIANGAGTGPQVV  129

Query  97   TIEPTDKAFKTHGCQPW  113
             I P+D AFKT  C PW
Sbjct  130  QIRPSDAAFKTQHCPPW  146


>gi|183983592|ref|YP_001851883.1| hypothetical protein MMAR_3613 [Mycobacterium marinum M]
 gi|183176918|gb|ACC42028.1| conserved hypothetical secreted protein [Mycobacterium marinum 
M]
Length=260

 Score = 70.9 bits (172),  Expect = 6e-11, Method: Compositional matrix adjust.
 Identities = 39/77 (51%), Positives = 46/77 (60%), Gaps = 6/77 (7%)

Query  40   PKTAIDSDGTYAVGIDIAPGTYSSAGPVGDGTCYWKRMGNPDGAL---IDNALSKKPQVV  96
            P + I  DGT+ VG+DI  GTY SAG  GD +CYW+R+    G L   I N     PQVV
Sbjct  76   PASGIPGDGTFRVGVDIKAGTYRSAG--GD-SCYWERLRGVGGTLDEVIANGAGTGPQVV  132

Query  97   TIEPTDKAFKTHGCQPW  113
             I P+D AFKT  C PW
Sbjct  133  QIRPSDAAFKTQHCPPW  149


>gi|342857900|ref|ZP_08714556.1| hypothetical protein MCOL_03460 [Mycobacterium colombiense CECT 
3035]
 gi|342135233|gb|EGT88399.1| hypothetical protein MCOL_03460 [Mycobacterium colombiense CECT 
3035]
Length=134

 Score = 69.3 bits (168),  Expect = 2e-10, Method: Compositional matrix adjust.
 Identities = 49/133 (37%), Positives = 63/133 (48%), Gaps = 23/133 (17%)

Query  3    LKPAPSPAAAFAVA----GLILAGWAGSVGLAGA--DPEPAPTP--------------KT  42
            ++P  +  A FA+      L LAG  GS   A       PA T               KT
Sbjct  1    MRPGAAAVAGFALFLAGFALFLAGCGGSSHTATTVTSTLPAETKTVTKTVAPPPPPGPKT  60

Query  43   AIDSDGTYAVGIDIAPGTYSSAGPVGDGTCYWKRMGNPD-GALIDNALSKKPQVVTIEPT  101
            +I+++GTY V  DIA GTY + G  G   CYW R+ + +   +IDN +    QVV I PT
Sbjct  61   SIENNGTYIVNKDIAAGTYRTDG--GRNACYWARLRSFNTNDVIDNNVGDGQQVVQILPT  118

Query  102  DKAFKTHGCQPWQ  114
            D AF T  C  WQ
Sbjct  119  DAAFMTRSCGKWQ  131


>gi|240170959|ref|ZP_04749618.1| hypothetical protein MkanA1_16733 [Mycobacterium kansasii ATCC 
12478]
Length=259

 Score = 68.2 bits (165),  Expect = 4e-10, Method: Compositional matrix adjust.
 Identities = 37/77 (49%), Positives = 41/77 (54%), Gaps = 6/77 (7%)

Query  40   PKTAIDSDGTYAVGIDIAPGTYSSAGPVGDGTCYWKRMGNPDGA---LIDNALSKKPQVV  96
            P   I  DGTY VG+DI PGTY S    G   CYW+R+    G    +I N     PQVV
Sbjct  68   PANTIPGDGTYRVGVDIRPGTYRSQ---GGNACYWERLRGLGGTVDDIIANGAGTGPQVV  124

Query  97   TIEPTDKAFKTHGCQPW  113
             I P D AFKT GC  W
Sbjct  125  QIAPADVAFKTQGCPAW  141


>gi|297157986|gb|ADI07698.1| hypothetical protein SBI_04578 [Streptomyces bingchenggensis 
BCW-1]
Length=239

 Score = 67.8 bits (164),  Expect = 5e-10, Method: Compositional matrix adjust.
 Identities = 39/96 (41%), Positives = 52/96 (55%), Gaps = 4/96 (4%)

Query  25   GSVGLAGADPEPAPTPKTAIDSDG-TYAVGIDIAPGTYSSAGPVGDGTCYWKRMGNP---  80
            G  G A    + + TPK+ +D +G  Y +G DIAPGTY S G   D TCYW+R  +    
Sbjct  143  GCHGWAAVPAKASGTPKSEVDGNGGMYRIGADIAPGTYKSTGNANDATCYWERSKDALHG  202

Query  81   DGALIDNALSKKPQVVTIEPTDKAFKTHGCQPWQNT  116
              ++I N       VVTI   D  FKT+GC+ W+ T
Sbjct  203  IDSIIANENVSGNGVVTIAAGDGYFKTNGCKNWKKT  238


 Score = 63.5 bits (153),  Expect = 1e-08, Method: Compositional matrix adjust.
 Identities = 35/85 (42%), Positives = 46/85 (55%), Gaps = 4/85 (4%)

Query  32   ADPEPAPTPKTAIDSDGTYAVGIDIAPGTYSSAGPVGDGTCYWKRMGNPDG---ALIDNA  88
            A+    P  + AI  DGT+ VG D+ PGTY S     DG CYW+R  +  G   +LI N 
Sbjct  64   ANKADKPKAEPAIGGDGTFQVGSDVKPGTYMSTDNT-DGMCYWERAKDSSGETDSLIAND  122

Query  89   LSKKPQVVTIEPTDKAFKTHGCQPW  113
                   VTI+ +DK FK++GC  W
Sbjct  123  NVMGNAYVTIKASDKIFKSNGCHGW  147


>gi|254823128|ref|ZP_05228129.1| hypothetical protein MintA_24580 [Mycobacterium intracellulare 
ATCC 13950]
Length=125

 Score = 67.8 bits (164),  Expect = 5e-10, Method: Compositional matrix adjust.
 Identities = 36/75 (48%), Positives = 45/75 (60%), Gaps = 3/75 (4%)

Query  41   KTAIDSDGTYAVGIDIAPGTYSSAGPVGDGTCYWKRMGNPD-GALIDNALSKKPQVVTIE  99
            KT+I+++GTY V  DIA GTY + G  G   CYW R+ + D   +IDN +   PQVV I 
Sbjct  50   KTSIEANGTYIVNKDIAAGTYRTDG--GKYGCYWARLRSFDTNDIIDNNVGDGPQVVRIM  107

Query  100  PTDKAFKTHGCQPWQ  114
            PTD AF T  C  W 
Sbjct  108  PTDTAFMTRSCGNWH  122


>gi|240167884|ref|ZP_04746543.1| hypothetical protein MkanA1_01110 [Mycobacterium kansasii ATCC 
12478]
Length=121

 Score = 66.6 bits (161),  Expect = 1e-09, Method: Compositional matrix adjust.
 Identities = 36/81 (45%), Positives = 46/81 (57%), Gaps = 4/81 (4%)

Query  35   EPAPTPKTAIDSDGTYAVGIDIAPGTYSSAGPVGDGTCYWKRMGNPD-GALIDNALSKKP  93
            +P  T    ID DGTY VG+DI PG Y +A   G  TC W R+G+ D G +ID+     P
Sbjct  33   DPFGTYTGVIDRDGTYLVGVDIMPGMYRTA---GGATCSWARLGSLDTGDIIDSWKGSGP  89

Query  94   QVVTIEPTDKAFKTHGCQPWQ  114
            Q + I+ +D AF T  C  WQ
Sbjct  90   QRIQIKESDTAFLTQDCGTWQ  110


>gi|336460995|gb|EGO39875.1| hypothetical protein MAPs_34340 [Mycobacterium avium subsp. paratuberculosis 
S397]
Length=86

 Score = 63.5 bits (153),  Expect = 9e-09, Method: Compositional matrix adjust.
 Identities = 33/75 (44%), Positives = 45/75 (60%), Gaps = 4/75 (5%)

Query  41   KTAIDSDGTYAVGIDIAPGTYSSAGPVGDGTCYWKRMGNPD-GALIDNALSKKPQVVTIE  99
            KT+I+++GT+ V  +IA GTY + G  G   CYW R+ + D   +IDN +    QVV I 
Sbjct  12   KTSIETNGTFIVNKEIAAGTYRTDGKSG---CYWARLRSFDTNDIIDNNVGDGAQVVRIL  68

Query  100  PTDKAFKTHGCQPWQ  114
            PTD AF T  C  W+
Sbjct  69   PTDVAFMTRSCGIWR  83


>gi|269836269|ref|YP_003318497.1| hypothetical protein Sthe_0236 [Sphaerobacter thermophilus DSM 
20745]
 gi|269785532|gb|ACZ37675.1| hypothetical protein Sthe_0236 [Sphaerobacter thermophilus DSM 
20745]
Length=473

 Score = 63.2 bits (152),  Expect = 1e-08, Method: Compositional matrix adjust.
 Identities = 36/84 (43%), Positives = 42/84 (50%), Gaps = 5/84 (5%)

Query  33   DPEPAPTPKTAIDSDGTYAVGIDIAPGTYSSAGPVGDGTCYWKRMGNPDGALID---NAL  89
            +P   P P      DGTY VGIDIAPGTY +        CYW+R+    G L D   N  
Sbjct  303  EPSEQPDPGPLSFPDGTYRVGIDIAPGTYRNTD--SSQFCYWERLSGFTGELNDIIANGF  360

Query  90   SKKPQVVTIEPTDKAFKTHGCQPW  113
            S   Q+VTI PTD  F +  C  W
Sbjct  361  SDARQIVTIAPTDAGFVSRRCGRW  384


 Score = 58.5 bits (140),  Expect = 3e-07, Method: Compositional matrix adjust.
 Identities = 34/88 (39%), Positives = 41/88 (47%), Gaps = 5/88 (5%)

Query  33   DPEPAPTPKTAIDSDGTYAVGIDIAPGTYSSAGPVGDGTCYWKRMGNPDGALID---NAL  89
            D  P  +  TA   DG Y VG DIAPG + ++   G   CYW+R+    G   D   N  
Sbjct  387  DDTPLTSSPTAPFGDGMYRVGRDIAPGLWRNSDSTG--FCYWERLRGFSGEFDDIIANEF  444

Query  90   SKKPQVVTIEPTDKAFKTHGCQPWQNTG  117
            S  PQ+V I PTD  F    C  W   G
Sbjct  445  SNAPQIVRIAPTDVGFSASRCGIWTRIG  472


>gi|258651339|ref|YP_003200495.1| hypothetical protein Namu_1099 [Nakamurella multipartita DSM 
44233]
 gi|258554564|gb|ACV77506.1| hypothetical protein Namu_1099 [Nakamurella multipartita DSM 
44233]
Length=184

 Score = 63.2 bits (152),  Expect = 1e-08, Method: Compositional matrix adjust.
 Identities = 35/80 (44%), Positives = 46/80 (58%), Gaps = 6/80 (7%)

Query  35   EPAPTPKTAIDSDGTYAVGIDIAPGTYSSAGPVGDGTCYWKRMGNPDGALIDN-ALSKKP  93
            E A  P T I  DG   VG+D+ PGTY S     +G CYW R+    G+L D  + S   
Sbjct  106  EAAAGPSTTIK-DGINLVGVDVQPGTYRSE----NGDCYWARLSGTSGSLNDIISNSNGA  160

Query  94   QVVTIEPTDKAFKTHGCQPW  113
             VVTI+P+D+AF++  C PW
Sbjct  161  TVVTIDPSDRAFESRRCAPW  180


>gi|118466415|ref|YP_880895.1| hypothetical protein MAV_1662 [Mycobacterium avium 104]
 gi|118167702|gb|ABK68599.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=141

 Score = 60.1 bits (144),  Expect = 1e-07, Method: Compositional matrix adjust.
 Identities = 47/128 (37%), Positives = 61/128 (48%), Gaps = 20/128 (15%)

Query  4    KPAPSPAAAFAVAGLILAGWAGSVGLAGADPEPAP----------------TPKTAIDSD  47
            + +P   AA A A L LAG  GS   A       P                 PKT+I+++
Sbjct  14   RRSPGKTAAVAGAALFLAGCGGSTPTATTVISTPPAQTKTVTVTVTPPPPPGPKTSIETN  73

Query  48   GTYAVGIDIAPGTYSSAGPVGDGTCYWKRMGNPD-GALIDNALSKKPQVVTIEPTDKAFK  106
            GT+ V  +IA GTY + G  G   CYW R+ + D   +IDN +    QVV I PTD AF 
Sbjct  74   GTFIVNKEIAAGTYRTDGKSG---CYWARLRSFDTNDIIDNNVGDGAQVVRILPTDVAFM  130

Query  107  THGCQPWQ  114
            T  C  W+
Sbjct  131  TRSCGIWR  138


>gi|41408419|ref|NP_961255.1| hypothetical protein MAP2321 [Mycobacterium avium subsp. paratuberculosis 
K-10]
 gi|41396775|gb|AAS04638.1| hypothetical protein MAP_2321 [Mycobacterium avium subsp. paratuberculosis 
K-10]
Length=112

 Score = 60.1 bits (144),  Expect = 1e-07, Method: Compositional matrix adjust.
 Identities = 31/73 (43%), Positives = 43/73 (59%), Gaps = 4/73 (5%)

Query  43   AIDSDGTYAVGIDIAPGTYSSAGPVGDGTCYWKRMGNPD-GALIDNALSKKPQVVTIEPT  101
            +I+++GT+ V  +IA GTY + G  G   CYW R+ + D   +IDN +    QVV I PT
Sbjct  40   SIETNGTFIVNKEIAAGTYRTDGKSG---CYWARLRSFDTNDIIDNNVGDGAQVVRILPT  96

Query  102  DKAFKTHGCQPWQ  114
            D AF T  C  W+
Sbjct  97   DVAFMTRSCGIWR  109


>gi|254774489|ref|ZP_05216005.1| hypothetical protein MaviaA2_07438 [Mycobacterium avium subsp. 
avium ATCC 25291]
Length=114

 Score = 60.1 bits (144),  Expect = 1e-07, Method: Compositional matrix adjust.
 Identities = 31/73 (43%), Positives = 43/73 (59%), Gaps = 4/73 (5%)

Query  43   AIDSDGTYAVGIDIAPGTYSSAGPVGDGTCYWKRMGNPD-GALIDNALSKKPQVVTIEPT  101
            +I+++GT+ V  +IA GTY + G  G   CYW R+ + D   +IDN +    QVV I PT
Sbjct  42   SIETNGTFIVNKEIAAGTYRTDGKSG---CYWARLRSFDTNDIIDNNVGDGAQVVRILPT  98

Query  102  DKAFKTHGCQPWQ  114
            D AF T  C  W+
Sbjct  99   DAAFMTRSCGIWR  111


>gi|302534876|ref|ZP_07287218.1| predicted protein [Streptomyces sp. C]
 gi|302443771|gb|EFL15587.1| predicted protein [Streptomyces sp. C]
Length=249

 Score = 59.3 bits (142),  Expect = 2e-07, Method: Compositional matrix adjust.
 Identities = 34/82 (42%), Positives = 44/82 (54%), Gaps = 5/82 (6%)

Query  40   PKTAIDSDG-TYAVGIDIAPGTYSSAGP-VGDGTCYWKRMGNPDGALIDNALSKKPQ---  94
            PKT    DG  + VG+D+APGTY S+GP  G   CYW+R  N    +   A +  P    
Sbjct  168  PKTEAAGDGGMFKVGLDLAPGTYKSSGPAAGSAGCYWERAKNASHDVDSIAANDNPTGPA  227

Query  95   VVTIEPTDKAFKTHGCQPWQNT  116
            VVT+   D  FKT GC  W+ +
Sbjct  228  VVTVSAQDGYFKTTGCATWKKS  249


 Score = 58.2 bits (139),  Expect = 4e-07, Method: Compositional matrix adjust.
 Identities = 31/77 (41%), Positives = 43/77 (56%), Gaps = 4/77 (5%)

Query  41   KTAIDSDGTYAVGIDIAPGTYSSAGPVGDGTCYWKRMGNPDG---ALIDNALSKKPQVVT  97
            K A+   GT+ VG D+ PGTY + G  G G CYW+R  +  G   +++ N        VT
Sbjct  82   KAAMRGSGTFQVGSDLQPGTYRTTGNKGLG-CYWERAKDASGEVESILANDNVVGTSYVT  140

Query  98   IEPTDKAFKTHGCQPWQ  114
            IE  DK FK++GC  W+
Sbjct  141  IEAGDKLFKSNGCNDWE  157


>gi|297190749|ref|ZP_06908147.1| predicted protein [Streptomyces pristinaespiralis ATCC 25486]
 gi|297150607|gb|EFH30685.1| predicted protein [Streptomyces pristinaespiralis ATCC 25486]
Length=195

 Score = 58.5 bits (140),  Expect = 3e-07, Method: Compositional matrix adjust.
 Identities = 34/83 (41%), Positives = 44/83 (54%), Gaps = 4/83 (4%)

Query  38   PTPKTAIDSDGTYAVGIDIAPGTYSSAGPVGDGTCYWKRMGNPDG---ALIDNALSKKPQ  94
            P P T+   DG Y VG DIA GTY +AG  G   CYW R+ +  G   A+I N   + P 
Sbjct  114  PGPATSFAGDGEYLVGTDIAAGTYKTAGADGSFGCYWARLKDASGEFDAIIANNNLEGPG  173

Query  95   VVTIEPTDKAFKTHGCQPWQNTG  117
             VT+    + F+T  C  W+ TG
Sbjct  174  RVTLN-KGEYFQTQRCAQWKKTG  195


>gi|15608492|ref|NP_215868.1| hypothetical protein Rv1352 [Mycobacterium tuberculosis H37Rv]
 gi|15840807|ref|NP_335844.1| hypothetical protein MT1395 [Mycobacterium tuberculosis CDC1551]
 gi|31792548|ref|NP_855041.1| hypothetical protein Mb1387 [Mycobacterium bovis AF2122/97]
 82 more sequence titles
 Length=123

 Score = 55.8 bits (133),  Expect = 2e-06, Method: Compositional matrix adjust.
 Identities = 31/83 (38%), Positives = 40/83 (49%), Gaps = 14/83 (16%)

Query  47   DGTYAVGIDIAPGTYSSAGP----------VGD-GTCYWKRMGNPDGA---LIDNALSKK  92
            DG + VG DIAPGTY + GP          V +  TC W     P+ +   ++D   S  
Sbjct  39   DGVFLVGTDIAPGTYRTEGPSNPLILVFGRVSELSTCSWSTHSAPEVSNENIVDTNTSMG  98

Query  93   PQVVTIEPTDKAFKTHGCQPWQN  115
            P  V I PT  AF+TH C+ W  
Sbjct  99   PMSVVIPPTVAAFQTHNCKLWMR  121


>gi|269794246|ref|YP_003313701.1| hypothetical protein Sked_09170 [Sanguibacter keddieii DSM 10542]
 gi|269096431|gb|ACZ20867.1| hypothetical protein Sked_09170 [Sanguibacter keddieii DSM 10542]
Length=808

 Score = 54.3 bits (129),  Expect = 6e-06, Method: Compositional matrix adjust.
 Identities = 31/82 (38%), Positives = 42/82 (52%), Gaps = 5/82 (6%)

Query  39   TPKTAIDSDGTYAVGIDIAPGTYSSAGPVGDGTCYWKRMGNPDG---ALIDNALSKKPQV  95
            TPKT++  DG YAVG  +APG Y + G  GD  CY+  + +  G   A+  N  S   Q 
Sbjct  729  TPKTSVTQDGVYAVGTQLAPGRYRALG-TGDF-CYYSVVSSFSGELDAIRINGFSAYTQE  786

Query  96   VTIEPTDKAFKTHGCQPWQNTG  117
            V I   D  F++  C  W+  G
Sbjct  787  VVITSRDVGFESSNCSTWRKVG  808


 Score = 52.4 bits (124),  Expect = 2e-05, Method: Compositional matrix adjust.
 Identities = 28/71 (40%), Positives = 36/71 (51%), Gaps = 6/71 (8%)

Query  47   DGTYAVGIDIAPGTYSSAGPVGDGTCYWKRMGNPDGAL---IDNALSKKPQVVTIEPTDK  103
            DG + VG  I+PGTY S  P     CYW+R  N    L   I N +    ++VTI P DK
Sbjct  655  DGIFRVGSQISPGTYISKNP---DFCYWERRSNATDDLEGIIANDIGNGQRIVTISPNDK  711

Query  104  AFKTHGCQPWQ  114
             F +  C  W+
Sbjct  712  YFSSDWCGGWK  722


>gi|118472896|ref|YP_885966.1| hypothetical protein MSMEG_1588 [Mycobacterium smegmatis str. 
MC2 155]
 gi|118174183|gb|ABK75079.1| conserved hypothetical protein [Mycobacterium smegmatis str. 
MC2 155]
Length=111

 Score = 53.1 bits (126),  Expect = 1e-05, Method: Compositional matrix adjust.
 Identities = 29/82 (36%), Positives = 37/82 (46%), Gaps = 15/82 (18%)

Query  47   DGTYAVGIDIAPGTYSSAG------------PVGDGTCYWKRMGNPDGA---LIDNALSK  91
            +G + VG DIAPG Y++ G            P  D  C W     PD     ++   +S 
Sbjct  26   EGFFLVGTDIAPGLYTTGGSESPFAVWINDVPTQDSMCMWFTYSTPDANKDNVVATNMSV  85

Query  92   KPQVVTIEPTDKAFKTHGCQPW  113
             P    I  T KAF+TH CQPW
Sbjct  86   GPMNANINSTVKAFETHNCQPW  107


>gi|183983957|ref|YP_001852248.1| hypothetical protein MMAR_3985 [Mycobacterium marinum M]
 gi|183177283|gb|ACC42393.1| conserved hypothetical secreted protein [Mycobacterium marinum 
M]
Length=122

 Score = 52.4 bits (124),  Expect = 2e-05, Method: Compositional matrix adjust.
 Identities = 38/122 (32%), Positives = 50/122 (41%), Gaps = 20/122 (16%)

Query  7    PSPAAAFAVAGLILAGWAGSVGLAGADPEPAPTPKTAIDSDGTYAVGIDIAPGTYSSAG-  65
            P P    A AGL+   W  ++ LA   P     P   I  +G + VG DIA G Y + G 
Sbjct  2    PLPRLRRAAAGLV--TWVATIALA---PPALADPIDPIPGNGFFLVGPDIATGLYHTVGS  56

Query  66   -----------PVGDGTCYWKRMGNPDG---ALIDNALSKKPQVVTIEPTDKAFKTHGCQ  111
                       P  D  C W     PD     +++  +S  P    I  T KAF++  CQ
Sbjct  57   ASDWTVWINNVPTQDSMCVWFTYSTPDANKDHVVETNISVGPMYANINSTVKAFESQNCQ  116

Query  112  PW  113
            PW
Sbjct  117  PW  118


>gi|118619072|ref|YP_907404.1| hypothetical protein MUL_3846 [Mycobacterium ulcerans Agy99]
 gi|118571182|gb|ABL05933.1| conserved hypothetical secreted protein [Mycobacterium ulcerans 
Agy99]
Length=122

 Score = 51.2 bits (121),  Expect = 5e-05, Method: Compositional matrix adjust.
 Identities = 38/122 (32%), Positives = 50/122 (41%), Gaps = 20/122 (16%)

Query  7    PSPAAAFAVAGLILAGWAGSVGLAGADPEPAPTPKTAIDSDGTYAVGIDIAPGTYSSAG-  65
            P P    A AGL+   W  ++ LA   P     P   I  +G + VG DIA G Y + G 
Sbjct  2    PLPRLRRAAAGLV--TWVATIALA---PPALADPIDPIPGNGFFLVGPDIATGLYRTVGS  56

Query  66   -----------PVGDGTCYWKRMGNPDG---ALIDNALSKKPQVVTIEPTDKAFKTHGCQ  111
                       P  D  C W     PD     +++  +S  P    I  T KAF++  CQ
Sbjct  57   ASDWTVWINNVPTQDSMCVWFTYSTPDANKDHVVETNISVGPIYANINSTVKAFESQNCQ  116

Query  112  PW  113
            PW
Sbjct  117  PW  118


>gi|342857983|ref|ZP_08714639.1| hypothetical protein MCOL_03875 [Mycobacterium colombiense CECT 
3035]
 gi|342135316|gb|EGT88482.1| hypothetical protein MCOL_03875 [Mycobacterium colombiense CECT 
3035]
Length=106

 Score = 51.2 bits (121),  Expect = 5e-05, Method: Compositional matrix adjust.
 Identities = 32/98 (33%), Positives = 40/98 (41%), Gaps = 15/98 (15%)

Query  31   GADPEPAPTPKTAIDSDGTYAVGIDIAPGTYSSAG------------PVGDGTCYWKRMG  78
             A P     P   I  +G + VG DIAPG Y +AG            P  D  C W    
Sbjct  5    AAAPTVVADPVDPIPGNGVFVVGPDIAPGLYRTAGSASTFGVWINNVPTQDSMCAWFTYS  64

Query  79   NPDG---ALIDNALSKKPQVVTIEPTDKAFKTHGCQPW  113
             PD     ++   +S  P    I  T KAF++  CQPW
Sbjct  65   TPDANKDHVVQTNMSVGPMFANINTTVKAFESQNCQPW  102


>gi|183983999|ref|YP_001852290.1| hypothetical protein MMAR_4028 [Mycobacterium marinum M]
 gi|183177325|gb|ACC42435.1| conserved hypothetical secreted protein [Mycobacterium marinum 
M]
Length=121

 Score = 50.4 bits (119),  Expect = 8e-05, Method: Compositional matrix adjust.
 Identities = 37/111 (34%), Positives = 45/111 (41%), Gaps = 17/111 (15%)

Query  24   AGSVGLAGADPEPAPT---PKTAIDSDGTYAVGIDIAPGTYSSAGPVG-----------D  69
            AG V    A    APT   P   I  +G + VG D+ PGTY + GP              
Sbjct  11   AGIVACMTACVFAAPTVADPGDQIPGNGVFLVGTDMLPGTYRTEGPANPLILVFGRVSEL  70

Query  70   GTCYWKRMGNPDGA---LIDNALSKKPQVVTIEPTDKAFKTHGCQPWQNTG  117
             TC W     P  +   +ID   S  P  V I PT  AF+T  C+ W   G
Sbjct  71   STCSWSTHSTPAASTDDIIDTNTSMGPMSVVIPPTVAAFQTMNCKLWMRVG  121


>gi|260907602|ref|ZP_05915924.1| hypothetical protein BlinB_19857 [Brevibacterium linens BL2]
Length=265

 Score = 48.9 bits (115),  Expect = 3e-04, Method: Compositional matrix adjust.
 Identities = 28/83 (34%), Positives = 39/83 (47%), Gaps = 3/83 (3%)

Query  34   PEPAPTPKTAIDSDGTYAVGIDIAPGTYSSAGPVGDGTCYWKRMGNPDGALIDNAL--SK  91
             E     +  I +DGTY VG D+  GTY     V    CYW+R+ +  G +I+N    S 
Sbjct  182  KEEEARDRGEIFNDGTYRVGDDVKAGTYVVESDVPFEGCYWERL-DASGEIIENNFVNSG  240

Query  92   KPQVVTIEPTDKAFKTHGCQPWQ  114
                VTI  +D +F    C  W+
Sbjct  241  FRVEVTISSSDYSFSAERCGEWR  263


>gi|334336394|ref|YP_004541546.1| hypothetical protein Isova_0868 [Isoptericola variabilis 225]
 gi|334106762|gb|AEG43652.1| hypothetical protein Isova_0868 [Isoptericola variabilis 225]
Length=224

 Score = 48.5 bits (114),  Expect = 3e-04, Method: Compositional matrix adjust.
 Identities = 28/71 (40%), Positives = 38/71 (54%), Gaps = 7/71 (9%)

Query  47   DGTYAVGIDIAPGTYSSAGPVGDGTCYW--KRMGNPDGALIDNALSK--KPQVVTIEPTD  102
            +GT+ VG+DI PGTY +  PV +G CYW   R G+    ++DN +     P V   E  D
Sbjct  154  EGTWTVGVDIEPGTYRTTEPV-NGDCYWGIYRSGSNKSDIVDNDIVTGGYPTVTLREGQD  212

Query  103  KAFKTHGCQPW  113
              F+T  C  W
Sbjct  213  --FQTSRCGSW  221


>gi|118619107|ref|YP_907439.1| hypothetical protein MUL_3893 [Mycobacterium ulcerans Agy99]
 gi|118571217|gb|ABL05968.1| conserved hypothetical secreted protein [Mycobacterium ulcerans 
Agy99]
Length=121

 Score = 48.1 bits (113),  Expect = 4e-04, Method: Compositional matrix adjust.
 Identities = 37/111 (34%), Positives = 44/111 (40%), Gaps = 17/111 (15%)

Query  24   AGSVGLAGADPEPAPT---PKTAIDSDGTYAVGIDIAPGTYSSAGPVG-----------D  69
            AG V    A    APT   P   I  +G + VG D+ PGTY + GP              
Sbjct  11   AGIVACTTACVFAAPTVADPGDQIPGNGVFLVGTDMLPGTYRTEGPANPLILVFGRVSEL  70

Query  70   GTCYWKRMGNPDGA---LIDNALSKKPQVVTIEPTDKAFKTHGCQPWQNTG  117
             TC W     P      +ID   S  P  V I PT  AF+T  C+ W   G
Sbjct  71   STCSWSTPSTPAANTDDIIDTNTSMGPMSVVIPPTVAAFQTMNCKLWMRVG  121


>gi|145225497|ref|YP_001136175.1| hypothetical protein Mflv_4921 [Mycobacterium gilvum PYR-GCK]
 gi|315445850|ref|YP_004078729.1| hypothetical protein Mspyr1_43380 [Mycobacterium sp. Spyr1]
 gi|145217983|gb|ABP47387.1| conserved hypothetical protein [Mycobacterium gilvum PYR-GCK]
 gi|315264153|gb|ADU00895.1| hypothetical protein Mspyr1_43380 [Mycobacterium sp. Spyr1]
Length=122

 Score = 47.0 bits (110),  Expect = 9e-04, Method: Compositional matrix adjust.
 Identities = 36/115 (32%), Positives = 45/115 (40%), Gaps = 20/115 (17%)

Query  14   AVAGLILAGWAGSVGLAGADPEPAPTPKTAIDSDGTYAVGIDIAPGTYSSAG--------  65
            A AGL+    A S G     P     P   I  +G + VG DIAPG Y + G        
Sbjct  9    AAAGLVAVTAAVSFG-----PPAGAEPVNPIPGNGIFLVGQDIAPGLYRTDGTASVFGVW  63

Query  66   ----PVGDGTCYWKRMGNPD---GALIDNALSKKPQVVTIEPTDKAFKTHGCQPW  113
                P  D  C W     PD     ++   +S  P    I  T KAF++  C PW
Sbjct  64   INDVPTQDSMCLWFTYSTPDTNKDNVVATNMSIGPMYANINATVKAFESRNCAPW  118


>gi|120402508|ref|YP_952337.1| hypothetical protein Mvan_1499 [Mycobacterium vanbaalenii PYR-1]
 gi|119955326|gb|ABM12331.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1]
Length=122

 Score = 47.0 bits (110),  Expect = 0.001, Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 43/100 (43%), Gaps = 23/100 (23%)

Query  30   AGADP-EPAPTPKTAIDSDGTYAVGIDIAPGTYSSAG------------PVGDGTCYWKR  76
            AGADP +P P        +G + VG DIAPG Y + G            P  D  C W  
Sbjct  26   AGADPMDPIP-------GNGFFLVGPDIAPGLYRTGGSASPFGVWINDVPTQDSMCAWFT  78

Query  77   MGNPD---GALIDNALSKKPQVVTIEPTDKAFKTHGCQPW  113
               PD     ++   +S  P    I  T +AF++  CQPW
Sbjct  79   YSTPDTNKDHVVATNMSIGPMFANINSTVQAFESRNCQPW  118


>gi|254819192|ref|ZP_05224193.1| hypothetical protein MintA_04659 [Mycobacterium intracellulare 
ATCC 13950]
Length=113

 Score = 44.7 bits (104),  Expect = 0.005, Method: Compositional matrix adjust.
 Identities = 26/82 (32%), Positives = 33/82 (41%), Gaps = 15/82 (18%)

Query  47   DGTYAVGIDIAPGTYSSAG------------PVGDGTCYWKRMGNPDG---ALIDNALSK  91
            +G + VG DIAPG Y + G            P  D  C W     PD     ++    S 
Sbjct  28   NGVFVVGPDIAPGLYHTGGSGSAFGVWINNVPTQDSMCSWFTYSTPDANKDHVLQTNTSI  87

Query  92   KPQVVTIEPTDKAFKTHGCQPW  113
             P    I    KAF++  CQPW
Sbjct  88   GPMYANINSAVKAFESQNCQPW  109


>gi|261736091|ref|YP_003257433.1| hypothetical protein pZL12.69 [Streptomyces sp. ZL12]
 gi|261349214|gb|ACX71146.1| hypothetical protein pZL12.69 [Streptomyces sp. ZL12]
Length=252

 Score = 44.3 bits (103),  Expect = 0.005, Method: Compositional matrix adjust.
 Identities = 26/66 (40%), Positives = 35/66 (54%), Gaps = 5/66 (7%)

Query  54   IDIAPGTYSSAGPVGDGTCYWKRMGNPDGALIDN--ALSKKPQVVTIEPTDKAFKTHGCQ  111
            + I PGTY ++G V D  CYW+R     G +IDN  A S +   VTI  +D  F +  C 
Sbjct  190  VTIPPGTYRASGRVED--CYWERTSE-GGDIIDNNFATSARSITVTIASSDGQFTSERCA  246

Query  112  PWQNTG  117
             W+  G
Sbjct  247  VWKPVG  252


>gi|41408501|ref|NP_961337.1| hypothetical protein MAP2403c [Mycobacterium avium subsp. paratuberculosis 
K-10]
 gi|41396857|gb|AAS04720.1| hypothetical protein MAP_2403c [Mycobacterium avium subsp. paratuberculosis 
K-10]
 gi|336461075|gb|EGO39955.1| hypothetical protein MAPs_35170 [Mycobacterium avium subsp. paratuberculosis 
S397]
Length=120

 Score = 44.3 bits (103),  Expect = 0.006, Method: Compositional matrix adjust.
 Identities = 28/91 (31%), Positives = 35/91 (39%), Gaps = 15/91 (16%)

Query  38   PTPKTAIDSDGTYAVGIDIAPGTYSSAG------------PVGDGTCYWKRMGNPDG---  82
            P P   I  +G + VG DIAPG Y + G            P  D  C W      D    
Sbjct  26   PDPMDPIPGNGVFVVGPDIAPGLYHTGGSGSAFGVWINNVPTQDSMCSWFTYSTADANKE  85

Query  83   ALIDNALSKKPQVVTIEPTDKAFKTHGCQPW  113
             ++    S  P    I    KAF++  CQPW
Sbjct  86   HVLQTNTSIGPMYANINSAVKAFESQNCQPW  116



Lambda     K      H
   0.312    0.135    0.422 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 130065254832


  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
    Posted date:  Sep 5, 2011  4:36 AM
  Number of letters in database: 5,219,829,388
  Number of sequences in database:  15,229,318



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40