BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv1918c Length=987 Score E Sequences producing significant alignments: (Bits) Value gi|15841390|ref|NP_336427.1| PPE family protein [Mycobacterium t... 1837 0.0 gi|298525412|ref|ZP_07012821.1| predicted protein [Mycobacterium... 1835 0.0 gi|57116929|ref|YP_177850.1| PPE family protein [Mycobacterium t... 1835 0.0 gi|306797748|ref|ZP_07436050.1| PPE family protein [Mycobacteriu... 1835 0.0 gi|289443398|ref|ZP_06433142.1| PPE family protein [Mycobacteriu... 1832 0.0 gi|308370866|ref|ZP_07422999.2| PPE family protein [Mycobacteriu... 1831 0.0 gi|254232093|ref|ZP_04925420.1| PPE family protein [Mycobacteriu... 1831 0.0 gi|289574601|ref|ZP_06454828.1| PPE family protein [Mycobacteriu... 1831 0.0 gi|289754014|ref|ZP_06513392.1| predicted protein [Mycobacterium... 1829 0.0 gi|294996836|ref|ZP_06802527.1| PPE family protein [Mycobacteriu... 1827 0.0 gi|254550934|ref|ZP_05141381.1| PPE family protein [Mycobacteriu... 1822 0.0 gi|306779927|ref|ZP_07418264.1| PPE family protein [Mycobacteriu... 1820 0.0 gi|167970408|ref|ZP_02552685.1| PPE family protein [Mycobacteriu... 1820 0.0 gi|340626928|ref|YP_004745380.1| PPE family protein [Mycobacteri... 1585 0.0 gi|254364737|ref|ZP_04980783.1| PPE family protein [Mycobacteriu... 1500 0.0 gi|148822960|ref|YP_001287714.1| PPE family protein [Mycobacteri... 1009 0.0 gi|183982826|ref|YP_001851117.1| PPE family protein [Mycobacteri... 999 0.0 gi|254550768|ref|ZP_05141215.1| PPE family protein [Mycobacteriu... 999 0.0 gi|121637661|ref|YP_977884.1| PPE family protein [Mycobacterium ... 988 0.0 gi|289745807|ref|ZP_06505185.1| PPE family protein [Mycobacteriu... 984 0.0 gi|339298334|gb|AEJ50444.1| PPE family protein [Mycobacterium tu... 984 0.0 gi|253799205|ref|YP_003032206.1| PPE family protein [Mycobacteri... 982 0.0 gi|57116904|ref|YP_177830.1| PPE family protein [Mycobacterium t... 979 0.0 gi|341601679|emb|CCC64352.1| PPE family protein [Mycobacterium b... 976 0.0 gi|31792941|ref|NP_855434.1| PPE family protein [Mycobacterium b... 973 0.0 gi|254231946|ref|ZP_04925273.1| PPE family protein [Mycobacteriu... 970 0.0 gi|254364588|ref|ZP_04980634.1| PPE family protein [Mycobacteriu... 958 0.0 gi|326903369|gb|EGE50302.1| PPE family protein [Mycobacterium tu... 953 0.0 gi|31793110|ref|NP_855603.1| PPE family protein [Mycobacterium b... 909 0.0 gi|121637823|ref|YP_978046.1| PPE family protein [Mycobacterium ... 906 0.0 gi|289757864|ref|ZP_06517242.1| predicted protein [Mycobacterium... 852 0.0 gi|15841218|ref|NP_336255.1| PPE family protein [Mycobacterium t... 847 0.0 gi|339631806|ref|YP_004723448.1| PPE family protein [Mycobacteri... 847 0.0 gi|340626761|ref|YP_004745213.1| ppe family protein [Mycobacteri... 837 0.0 gi|289443216|ref|ZP_06432960.1| PPE family protein [Mycobacteriu... 815 0.0 gi|183981049|ref|YP_001849340.1| PPE family protein [Mycobacteri... 800 0.0 gi|289750313|ref|ZP_06509691.1| PPE family protein [Mycobacteriu... 755 0.0 gi|183980953|ref|YP_001849244.1| PPE family protein [Mycobacteri... 748 0.0 gi|298525254|ref|ZP_07012663.1| predicted protein [Mycobacterium... 724 0.0 gi|306793197|ref|ZP_07431499.1| putative PPE family protein [Myc... 715 0.0 gi|306972055|ref|ZP_07484716.1| putative PPE family protein [Myc... 710 0.0 gi|307084344|ref|ZP_07493457.1| putative PPE family protein [Myc... 705 0.0 gi|323719734|gb|EGB28849.1| PPE family protein [Mycobacterium tu... 698 0.0 gi|306788863|ref|ZP_07427185.1| putative PPE family protein [Myc... 694 0.0 gi|306803461|ref|ZP_07440129.1| putative PPE family protein [Myc... 691 0.0 gi|308375671|ref|ZP_07444707.2| LOW QUALITY PROTEIN: putative PP... 689 0.0 gi|306797578|ref|ZP_07435880.1| putative PPE family protein [Myc... 683 0.0 gi|306784498|ref|ZP_07422820.1| PPE family protein [Mycobacteriu... 678 0.0 gi|289753844|ref|ZP_06513222.1| predicted protein [Mycobacterium... 667 0.0 gi|306779763|ref|ZP_07418100.1| PPE family protein [Mycobacteriu... 666 0.0 >gi|15841390|ref|NP_336427.1| PPE family protein [Mycobacterium tuberculosis CDC1551] gi|148823130|ref|YP_001287884.1| PPE family protein [Mycobacterium tuberculosis F11] gi|13881626|gb|AAK46241.1| PPE family protein [Mycobacterium tuberculosis CDC1551] gi|148721657|gb|ABR06282.1| PPE family protein [Mycobacterium tuberculosis F11] gi|323719536|gb|EGB28661.1| PPE family protein [Mycobacterium tuberculosis CDC1551A] Length=1013 Score = 1837 bits (4758), Expect = 0.0, Method: Compositional matrix adjust. Identities = 987/987 (100%), Positives = 987/987 (100%), Gaps = 0/987 (0%) Query 1 MHYSVLPPEINSALIFAGAGSGPMLAAASAWDGLATELASAAVSFGSVTAGLVGGSWQGR 60 MHYSVLPPEINSALIFAGAGSGPMLAAASAWDGLATELASAAVSFGSVTAGLVGGSWQGR Sbjct 27 MHYSVLPPEINSALIFAGAGSGPMLAAASAWDGLATELASAAVSFGSVTAGLVGGSWQGR 86 Query 61 SSVAMAAAAAPYAGWLAAAATQAEQAATQAQVMVAEFEAVRLAMVQPALVAANRSGLISL 120 SSVAMAAAAAPYAGWLAAAATQAEQAATQAQVMVAEFEAVRLAMVQPALVAANRSGLISL Sbjct 87 SSVAMAAAAAPYAGWLAAAATQAEQAATQAQVMVAEFEAVRLAMVQPALVAANRSGLISL 146 Query 121 VISNLFGQNAPAIAAAEAAYEEMWALDVSAMAAYHSGASAVAVALPAFALPLRLPAGLAA 180 VISNLFGQNAPAIAAAEAAYEEMWALDVSAMAAYHSGASAVAVALPAFALPLRLPAGLAA Sbjct 147 VISNLFGQNAPAIAAAEAAYEEMWALDVSAMAAYHSGASAVAVALPAFALPLRLPAGLAA 206 Query 181 GPAAVVTALTTAVGMPTFAGRAIAASLGLANVGGGNLGNANNGLGNIGNANLGNNNLGSG 240 GPAAVVTALTTAVGMPTFAGRAIAASLGLANVGGGNLGNANNGLGNIGNANLGNNNLGSG Sbjct 207 GPAAVVTALTTAVGMPTFAGRAIAASLGLANVGGGNLGNANNGLGNIGNANLGNNNLGSG 266 Query 241 NFGSFNIGSANLGGNNIGIGNAGANNFGLANLGNLNTGFANAGIGNFGIANTGNNNIGNG 300 NFGSFNIGSANLGGNNIGIGNAGANNFGLANLGNLNTGFANAGIGNFGIANTGNNNIGNG Sbjct 267 NFGSFNIGSANLGGNNIGIGNAGANNFGLANLGNLNTGFANAGIGNFGIANTGNNNIGNG 326 Query 301 LTGNNQIGIGGLNSGNGNVGLFNAGSANIGFFNSGNGNFGIGNSGNFSTGLFNPGHGNTG 360 LTGNNQIGIGGLNSGNGNVGLFNAGSANIGFFNSGNGNFGIGNSGNFSTGLFNPGHGNTG Sbjct 327 LTGNNQIGIGGLNSGNGNVGLFNAGSANIGFFNSGNGNFGIGNSGNFSTGLFNPGHGNTG 386 Query 361 FLNAGSFNTGMFDVGNANTGSFNVGHYNFGAFNPGPSNTGTFNTGGANTGWFNTGSINTG 420 FLNAGSFNTGMFDVGNANTGSFNVGHYNFGAFNPGPSNTGTFNTGGANTGWFNTGSINTG Sbjct 387 FLNAGSFNTGMFDVGNANTGSFNVGHYNFGAFNPGPSNTGTFNTGGANTGWFNTGSINTG 446 Query 421 AFNIGDMNNGLFNTGDMNNGVFYRGVGQGSLQFAITSPDLTLPSLEIPGISVPAFSLPAI 480 AFNIGDMNNGLFNTGDMNNGVFYRGVGQGSLQFAITSPDLTLPSLEIPGISVPAFSLPAI Sbjct 447 AFNIGDMNNGLFNTGDMNNGVFYRGVGQGSLQFAITSPDLTLPSLEIPGISVPAFSLPAI 506 Query 481 TLPSLTIPAVTTPANVTVGAFDLPGLTVPSLTIPAAMTPANITVGAFDLPGLTVPSLTIP 540 TLPSLTIPAVTTPANVTVGAFDLPGLTVPSLTIPAAMTPANITVGAFDLPGLTVPSLTIP Sbjct 507 TLPSLTIPAVTTPANVTVGAFDLPGLTVPSLTIPAAMTPANITVGAFDLPGLTVPSLTIP 566 Query 541 ATTTPANITVGAFNLPQLSIPSVTVPPITIPAGTALGAFNLPTLSIPSVTVPPITIPAGT 600 ATTTPANITVGAFNLPQLSIPSVTVPPITIPAGTALGAFNLPTLSIPSVTVPPITIPAGT Sbjct 567 ATTTPANITVGAFNLPQLSIPSVTVPPITIPAGTALGAFNLPTLSIPSVTVPPITIPAGT 626 Query 601 TVGGFTLPTIHTPLISTPQISIGGFSTPGIATQANSGVINLPTFSLNGITITNLVVFIPN 660 TVGGFTLPTIHTPLISTPQISIGGFSTPGIATQANSGVINLPTFSLNGITITNLVVFIPN Sbjct 627 TVGGFTLPTIHTPLISTPQISIGGFSTPGIATQANSGVINLPTFSLNGITITNLVVFIPN 686 Query 661 NITALQTNMPGVFPQIGGFANTPPAFINTGTITVGGGQINGVGFSIGAINVTPFTLPNVV 720 NITALQTNMPGVFPQIGGFANTPPAFINTGTITVGGGQINGVGFSIGAINVTPFTLPNVV Sbjct 687 NITALQTNMPGVFPQIGGFANTPPAFINTGTITVGGGQINGVGFSIGAINVTPFTLPNVV 746 Query 721 IQPWSLGGISVDGFTLPEISTQEFTTPALTISPIGVGALSLPDITTQQFTTPELTIDPIT 780 IQPWSLGGISVDGFTLPEISTQEFTTPALTISPIGVGALSLPDITTQQFTTPELTIDPIT Sbjct 747 IQPWSLGGISVDGFTLPEISTQEFTTPALTISPIGVGALSLPDITTQQFTTPELTIDPIT 806 Query 781 LGGFTLPQLSIPAITTPAFTIDPIALGGFTLPQIMTPEITTPPFAIDPIGLSGFTLPQVN 840 LGGFTLPQLSIPAITTPAFTIDPIALGGFTLPQIMTPEITTPPFAIDPIGLSGFTLPQVN Sbjct 807 LGGFTLPQLSIPAITTPAFTIDPIALGGFTLPQIMTPEITTPPFAIDPIGLSGFTLPQVN 866 Query 841 IPEITTPEFTIQPVGLAAFTTPALTIASIHLPSTTMGGFAIPAGPGYFNSSATPSLGFFN 900 IPEITTPEFTIQPVGLAAFTTPALTIASIHLPSTTMGGFAIPAGPGYFNSSATPSLGFFN Sbjct 867 IPEITTPEFTIQPVGLAAFTTPALTIASIHLPSTTMGGFAIPAGPGYFNSSATPSLGFFN 926 Query 901 AGIGGNSGFGNSGSGLSGWFNTSPVGLLAGSGYQNYGGLISGFSNLGSGISGFANTGTLP 960 AGIGGNSGFGNSGSGLSGWFNTSPVGLLAGSGYQNYGGLISGFSNLGSGISGFANTGTLP Sbjct 927 AGIGGNSGFGNSGSGLSGWFNTSPVGLLAGSGYQNYGGLISGFSNLGSGISGFANTGTLP 986 Query 961 FAVTSLVSGLANIGNNLSGLFFQSTTP 987 FAVTSLVSGLANIGNNLSGLFFQSTTP Sbjct 987 FAVTSLVSGLANIGNNLSGLFFQSTTP 1013 >gi|298525412|ref|ZP_07012821.1| predicted protein [Mycobacterium tuberculosis 94_M4241A] gi|298495206|gb|EFI30500.1| predicted protein [Mycobacterium tuberculosis 94_M4241A] Length=1013 Score = 1835 bits (4754), Expect = 0.0, Method: Compositional matrix adjust. Identities = 986/987 (99%), Positives = 986/987 (99%), Gaps = 0/987 (0%) Query 1 MHYSVLPPEINSALIFAGAGSGPMLAAASAWDGLATELASAAVSFGSVTAGLVGGSWQGR 60 MHYSVLPPEINSALIFAGAGSGPMLAAASAWDGLATELASAAVSFGSVTAGLVGGSWQGR Sbjct 27 MHYSVLPPEINSALIFAGAGSGPMLAAASAWDGLATELASAAVSFGSVTAGLVGGSWQGR 86 Query 61 SSVAMAAAAAPYAGWLAAAATQAEQAATQAQVMVAEFEAVRLAMVQPALVAANRSGLISL 120 SSVAMAAAAAPYAGWLAAAATQAEQAATQAQVMVAEFEAVRLAMVQPALVAANRSGLISL Sbjct 87 SSVAMAAAAAPYAGWLAAAATQAEQAATQAQVMVAEFEAVRLAMVQPALVAANRSGLISL 146 Query 121 VISNLFGQNAPAIAAAEAAYEEMWALDVSAMAAYHSGASAVAVALPAFALPLRLPAGLAA 180 VISNLFGQNAPAIAAAEAAYEEMWALDVSAMAAYHSGASAVAVALPAFALPLRLPAGLAA Sbjct 147 VISNLFGQNAPAIAAAEAAYEEMWALDVSAMAAYHSGASAVAVALPAFALPLRLPAGLAA 206 Query 181 GPAAVVTALTTAVGMPTFAGRAIAASLGLANVGGGNLGNANNGLGNIGNANLGNNNLGSG 240 GPAAVVTALTTAVGMPTFAGRAIAASLGLANVGGGNLGNANNGLGNIGNANLGNNNLGSG Sbjct 207 GPAAVVTALTTAVGMPTFAGRAIAASLGLANVGGGNLGNANNGLGNIGNANLGNNNLGSG 266 Query 241 NFGSFNIGSANLGGNNIGIGNAGANNFGLANLGNLNTGFANAGIGNFGIANTGNNNIGNG 300 NFGSFNIGSANLGGNNIGIGNAGANNFGLANLGNLNTGFANAGIGNFGIANTGNNNIGNG Sbjct 267 NFGSFNIGSANLGGNNIGIGNAGANNFGLANLGNLNTGFANAGIGNFGIANTGNNNIGNG 326 Query 301 LTGNNQIGIGGLNSGNGNVGLFNAGSANIGFFNSGNGNFGIGNSGNFSTGLFNPGHGNTG 360 LTGNNQIGIGGLNSGNGNVGLFNAGSANIGFFNSGNGNFGIGNSGNFSTGLFNPGHGNTG Sbjct 327 LTGNNQIGIGGLNSGNGNVGLFNAGSANIGFFNSGNGNFGIGNSGNFSTGLFNPGHGNTG 386 Query 361 FLNAGSFNTGMFDVGNANTGSFNVGHYNFGAFNPGPSNTGTFNTGGANTGWFNTGSINTG 420 FLNAGSFNTGMFDVGNANTGSFNVGHYNFGAFNPGPSNTGTFNTGGANTGWFNTGSINTG Sbjct 387 FLNAGSFNTGMFDVGNANTGSFNVGHYNFGAFNPGPSNTGTFNTGGANTGWFNTGSINTG 446 Query 421 AFNIGDMNNGLFNTGDMNNGVFYRGVGQGSLQFAITSPDLTLPSLEIPGISVPAFSLPAI 480 AFNIGDMNNGLFNTGDMNNGVFYRGVGQGSLQFAITSPDLTLPSLEIPGISVPAFSLPAI Sbjct 447 AFNIGDMNNGLFNTGDMNNGVFYRGVGQGSLQFAITSPDLTLPSLEIPGISVPAFSLPAI 506 Query 481 TLPSLTIPAVTTPANVTVGAFDLPGLTVPSLTIPAAMTPANITVGAFDLPGLTVPSLTIP 540 TLPSLTIPAVTTPANVTVGAFDLPGLTVPSLTIPAAMTPANITVGAFDLPGLTVPSLTIP Sbjct 507 TLPSLTIPAVTTPANVTVGAFDLPGLTVPSLTIPAAMTPANITVGAFDLPGLTVPSLTIP 566 Query 541 ATTTPANITVGAFNLPQLSIPSVTVPPITIPAGTALGAFNLPTLSIPSVTVPPITIPAGT 600 ATTTPANITVGAFNLPQLSIPSVTVPPITIPAGTALGAFNLPTLSIPSVTVPPITIPAGT Sbjct 567 ATTTPANITVGAFNLPQLSIPSVTVPPITIPAGTALGAFNLPTLSIPSVTVPPITIPAGT 626 Query 601 TVGGFTLPTIHTPLISTPQISIGGFSTPGIATQANSGVINLPTFSLNGITITNLVVFIPN 660 TVGGFTLPTIHTPLISTPQISIGGFSTPGIATQANSGVINLPTFSLNGITITNLVVFIPN Sbjct 627 TVGGFTLPTIHTPLISTPQISIGGFSTPGIATQANSGVINLPTFSLNGITITNLVVFIPN 686 Query 661 NITALQTNMPGVFPQIGGFANTPPAFINTGTITVGGGQINGVGFSIGAINVTPFTLPNVV 720 NITALQTNMPGVFPQIGGFANTPPAFINTGTITVGGGQINGVGFSIGAINVTPFTLPNVV Sbjct 687 NITALQTNMPGVFPQIGGFANTPPAFINTGTITVGGGQINGVGFSIGAINVTPFTLPNVV 746 Query 721 IQPWSLGGISVDGFTLPEISTQEFTTPALTISPIGVGALSLPDITTQQFTTPELTIDPIT 780 IQPWSLGGISVDGFTLPEISTQEFTTPALTISPIGVGALSLPDITTQQFTTPELTIDPIT Sbjct 747 IQPWSLGGISVDGFTLPEISTQEFTTPALTISPIGVGALSLPDITTQQFTTPELTIDPIT 806 Query 781 LGGFTLPQLSIPAITTPAFTIDPIALGGFTLPQIMTPEITTPPFAIDPIGLSGFTLPQVN 840 LGGFTLPQLSIPAITTPAFTIDPIALGGFTLPQIMTPEITTPPFAIDPIGLSGFTLPQVN Sbjct 807 LGGFTLPQLSIPAITTPAFTIDPIALGGFTLPQIMTPEITTPPFAIDPIGLSGFTLPQVN 866 Query 841 IPEITTPEFTIQPVGLAAFTTPALTIASIHLPSTTMGGFAIPAGPGYFNSSATPSLGFFN 900 IPEITTPEFTIQPVGLAAFTTPALTIASIHLPSTTMGGFAIPAGPGYFNSSATPS GFFN Sbjct 867 IPEITTPEFTIQPVGLAAFTTPALTIASIHLPSTTMGGFAIPAGPGYFNSSATPSSGFFN 926 Query 901 AGIGGNSGFGNSGSGLSGWFNTSPVGLLAGSGYQNYGGLISGFSNLGSGISGFANTGTLP 960 AGIGGNSGFGNSGSGLSGWFNTSPVGLLAGSGYQNYGGLISGFSNLGSGISGFANTGTLP Sbjct 927 AGIGGNSGFGNSGSGLSGWFNTSPVGLLAGSGYQNYGGLISGFSNLGSGISGFANTGTLP 986 Query 961 FAVTSLVSGLANIGNNLSGLFFQSTTP 987 FAVTSLVSGLANIGNNLSGLFFQSTTP Sbjct 987 FAVTSLVSGLANIGNNLSGLFFQSTTP 1013 >gi|57116929|ref|YP_177850.1| PPE family protein [Mycobacterium tuberculosis H37Rv] gi|148661726|ref|YP_001283249.1| PPE family protein [Mycobacterium tuberculosis H37Ra] gi|253799035|ref|YP_003032036.1| PPE family protein [Mycobacterium tuberculosis KZN 1435] 17 more sequence titles Length=987 Score = 1835 bits (4753), Expect = 0.0, Method: Compositional matrix adjust. Identities = 987/987 (100%), Positives = 987/987 (100%), Gaps = 0/987 (0%) Query 1 MHYSVLPPEINSALIFAGAGSGPMLAAASAWDGLATELASAAVSFGSVTAGLVGGSWQGR 60 MHYSVLPPEINSALIFAGAGSGPMLAAASAWDGLATELASAAVSFGSVTAGLVGGSWQGR Sbjct 1 MHYSVLPPEINSALIFAGAGSGPMLAAASAWDGLATELASAAVSFGSVTAGLVGGSWQGR 60 Query 61 SSVAMAAAAAPYAGWLAAAATQAEQAATQAQVMVAEFEAVRLAMVQPALVAANRSGLISL 120 SSVAMAAAAAPYAGWLAAAATQAEQAATQAQVMVAEFEAVRLAMVQPALVAANRSGLISL Sbjct 61 SSVAMAAAAAPYAGWLAAAATQAEQAATQAQVMVAEFEAVRLAMVQPALVAANRSGLISL 120 Query 121 VISNLFGQNAPAIAAAEAAYEEMWALDVSAMAAYHSGASAVAVALPAFALPLRLPAGLAA 180 VISNLFGQNAPAIAAAEAAYEEMWALDVSAMAAYHSGASAVAVALPAFALPLRLPAGLAA Sbjct 121 VISNLFGQNAPAIAAAEAAYEEMWALDVSAMAAYHSGASAVAVALPAFALPLRLPAGLAA 180 Query 181 GPAAVVTALTTAVGMPTFAGRAIAASLGLANVGGGNLGNANNGLGNIGNANLGNNNLGSG 240 GPAAVVTALTTAVGMPTFAGRAIAASLGLANVGGGNLGNANNGLGNIGNANLGNNNLGSG Sbjct 181 GPAAVVTALTTAVGMPTFAGRAIAASLGLANVGGGNLGNANNGLGNIGNANLGNNNLGSG 240 Query 241 NFGSFNIGSANLGGNNIGIGNAGANNFGLANLGNLNTGFANAGIGNFGIANTGNNNIGNG 300 NFGSFNIGSANLGGNNIGIGNAGANNFGLANLGNLNTGFANAGIGNFGIANTGNNNIGNG Sbjct 241 NFGSFNIGSANLGGNNIGIGNAGANNFGLANLGNLNTGFANAGIGNFGIANTGNNNIGNG 300 Query 301 LTGNNQIGIGGLNSGNGNVGLFNAGSANIGFFNSGNGNFGIGNSGNFSTGLFNPGHGNTG 360 LTGNNQIGIGGLNSGNGNVGLFNAGSANIGFFNSGNGNFGIGNSGNFSTGLFNPGHGNTG Sbjct 301 LTGNNQIGIGGLNSGNGNVGLFNAGSANIGFFNSGNGNFGIGNSGNFSTGLFNPGHGNTG 360 Query 361 FLNAGSFNTGMFDVGNANTGSFNVGHYNFGAFNPGPSNTGTFNTGGANTGWFNTGSINTG 420 FLNAGSFNTGMFDVGNANTGSFNVGHYNFGAFNPGPSNTGTFNTGGANTGWFNTGSINTG Sbjct 361 FLNAGSFNTGMFDVGNANTGSFNVGHYNFGAFNPGPSNTGTFNTGGANTGWFNTGSINTG 420 Query 421 AFNIGDMNNGLFNTGDMNNGVFYRGVGQGSLQFAITSPDLTLPSLEIPGISVPAFSLPAI 480 AFNIGDMNNGLFNTGDMNNGVFYRGVGQGSLQFAITSPDLTLPSLEIPGISVPAFSLPAI Sbjct 421 AFNIGDMNNGLFNTGDMNNGVFYRGVGQGSLQFAITSPDLTLPSLEIPGISVPAFSLPAI 480 Query 481 TLPSLTIPAVTTPANVTVGAFDLPGLTVPSLTIPAAMTPANITVGAFDLPGLTVPSLTIP 540 TLPSLTIPAVTTPANVTVGAFDLPGLTVPSLTIPAAMTPANITVGAFDLPGLTVPSLTIP Sbjct 481 TLPSLTIPAVTTPANVTVGAFDLPGLTVPSLTIPAAMTPANITVGAFDLPGLTVPSLTIP 540 Query 541 ATTTPANITVGAFNLPQLSIPSVTVPPITIPAGTALGAFNLPTLSIPSVTVPPITIPAGT 600 ATTTPANITVGAFNLPQLSIPSVTVPPITIPAGTALGAFNLPTLSIPSVTVPPITIPAGT Sbjct 541 ATTTPANITVGAFNLPQLSIPSVTVPPITIPAGTALGAFNLPTLSIPSVTVPPITIPAGT 600 Query 601 TVGGFTLPTIHTPLISTPQISIGGFSTPGIATQANSGVINLPTFSLNGITITNLVVFIPN 660 TVGGFTLPTIHTPLISTPQISIGGFSTPGIATQANSGVINLPTFSLNGITITNLVVFIPN Sbjct 601 TVGGFTLPTIHTPLISTPQISIGGFSTPGIATQANSGVINLPTFSLNGITITNLVVFIPN 660 Query 661 NITALQTNMPGVFPQIGGFANTPPAFINTGTITVGGGQINGVGFSIGAINVTPFTLPNVV 720 NITALQTNMPGVFPQIGGFANTPPAFINTGTITVGGGQINGVGFSIGAINVTPFTLPNVV Sbjct 661 NITALQTNMPGVFPQIGGFANTPPAFINTGTITVGGGQINGVGFSIGAINVTPFTLPNVV 720 Query 721 IQPWSLGGISVDGFTLPEISTQEFTTPALTISPIGVGALSLPDITTQQFTTPELTIDPIT 780 IQPWSLGGISVDGFTLPEISTQEFTTPALTISPIGVGALSLPDITTQQFTTPELTIDPIT Sbjct 721 IQPWSLGGISVDGFTLPEISTQEFTTPALTISPIGVGALSLPDITTQQFTTPELTIDPIT 780 Query 781 LGGFTLPQLSIPAITTPAFTIDPIALGGFTLPQIMTPEITTPPFAIDPIGLSGFTLPQVN 840 LGGFTLPQLSIPAITTPAFTIDPIALGGFTLPQIMTPEITTPPFAIDPIGLSGFTLPQVN Sbjct 781 LGGFTLPQLSIPAITTPAFTIDPIALGGFTLPQIMTPEITTPPFAIDPIGLSGFTLPQVN 840 Query 841 IPEITTPEFTIQPVGLAAFTTPALTIASIHLPSTTMGGFAIPAGPGYFNSSATPSLGFFN 900 IPEITTPEFTIQPVGLAAFTTPALTIASIHLPSTTMGGFAIPAGPGYFNSSATPSLGFFN Sbjct 841 IPEITTPEFTIQPVGLAAFTTPALTIASIHLPSTTMGGFAIPAGPGYFNSSATPSLGFFN 900 Query 901 AGIGGNSGFGNSGSGLSGWFNTSPVGLLAGSGYQNYGGLISGFSNLGSGISGFANTGTLP 960 AGIGGNSGFGNSGSGLSGWFNTSPVGLLAGSGYQNYGGLISGFSNLGSGISGFANTGTLP Sbjct 901 AGIGGNSGFGNSGSGLSGWFNTSPVGLLAGSGYQNYGGLISGFSNLGSGISGFANTGTLP 960 Query 961 FAVTSLVSGLANIGNNLSGLFFQSTTP 987 FAVTSLVSGLANIGNNLSGLFFQSTTP Sbjct 961 FAVTSLVSGLANIGNNLSGLFFQSTTP 987 >gi|306797748|ref|ZP_07436050.1| PPE family protein [Mycobacterium tuberculosis SUMu006] gi|308341922|gb|EFP30773.1| PPE family protein [Mycobacterium tuberculosis SUMu006] Length=1013 Score = 1835 bits (4752), Expect = 0.0, Method: Compositional matrix adjust. Identities = 986/987 (99%), Positives = 986/987 (99%), Gaps = 0/987 (0%) Query 1 MHYSVLPPEINSALIFAGAGSGPMLAAASAWDGLATELASAAVSFGSVTAGLVGGSWQGR 60 MHYSVLPPEINSALIFAGAGSGPMLAAASAWDGLATELASAAVSFGSVTAGLVGGSWQGR Sbjct 27 MHYSVLPPEINSALIFAGAGSGPMLAAASAWDGLATELASAAVSFGSVTAGLVGGSWQGR 86 Query 61 SSVAMAAAAAPYAGWLAAAATQAEQAATQAQVMVAEFEAVRLAMVQPALVAANRSGLISL 120 SSVAMAAAAAPYAGWLAAAATQAEQAATQAQVMVAEFEAVRLAMVQPALVAANRSGLISL Sbjct 87 SSVAMAAAAAPYAGWLAAAATQAEQAATQAQVMVAEFEAVRLAMVQPALVAANRSGLISL 146 Query 121 VISNLFGQNAPAIAAAEAAYEEMWALDVSAMAAYHSGASAVAVALPAFALPLRLPAGLAA 180 VISNLFGQNAPAIAAAEAAYEEMWALDVSAMAAYHSGASAVAVALPAFALPLRLPAGLAA Sbjct 147 VISNLFGQNAPAIAAAEAAYEEMWALDVSAMAAYHSGASAVAVALPAFALPLRLPAGLAA 206 Query 181 GPAAVVTALTTAVGMPTFAGRAIAASLGLANVGGGNLGNANNGLGNIGNANLGNNNLGSG 240 GPAAVVTALTTAVGMPTFAGRAIAASLGLANVGGGNLGNANNGLGNIGNANLGNNNLGSG Sbjct 207 GPAAVVTALTTAVGMPTFAGRAIAASLGLANVGGGNLGNANNGLGNIGNANLGNNNLGSG 266 Query 241 NFGSFNIGSANLGGNNIGIGNAGANNFGLANLGNLNTGFANAGIGNFGIANTGNNNIGNG 300 NFGSFNIGSANLGGNNI IGNAGANNFGLANLGNLNTGFANAGIGNFGIANTGNNNIGNG Sbjct 267 NFGSFNIGSANLGGNNIDIGNAGANNFGLANLGNLNTGFANAGIGNFGIANTGNNNIGNG 326 Query 301 LTGNNQIGIGGLNSGNGNVGLFNAGSANIGFFNSGNGNFGIGNSGNFSTGLFNPGHGNTG 360 LTGNNQIGIGGLNSGNGNVGLFNAGSANIGFFNSGNGNFGIGNSGNFSTGLFNPGHGNTG Sbjct 327 LTGNNQIGIGGLNSGNGNVGLFNAGSANIGFFNSGNGNFGIGNSGNFSTGLFNPGHGNTG 386 Query 361 FLNAGSFNTGMFDVGNANTGSFNVGHYNFGAFNPGPSNTGTFNTGGANTGWFNTGSINTG 420 FLNAGSFNTGMFDVGNANTGSFNVGHYNFGAFNPGPSNTGTFNTGGANTGWFNTGSINTG Sbjct 387 FLNAGSFNTGMFDVGNANTGSFNVGHYNFGAFNPGPSNTGTFNTGGANTGWFNTGSINTG 446 Query 421 AFNIGDMNNGLFNTGDMNNGVFYRGVGQGSLQFAITSPDLTLPSLEIPGISVPAFSLPAI 480 AFNIGDMNNGLFNTGDMNNGVFYRGVGQGSLQFAITSPDLTLPSLEIPGISVPAFSLPAI Sbjct 447 AFNIGDMNNGLFNTGDMNNGVFYRGVGQGSLQFAITSPDLTLPSLEIPGISVPAFSLPAI 506 Query 481 TLPSLTIPAVTTPANVTVGAFDLPGLTVPSLTIPAAMTPANITVGAFDLPGLTVPSLTIP 540 TLPSLTIPAVTTPANVTVGAFDLPGLTVPSLTIPAAMTPANITVGAFDLPGLTVPSLTIP Sbjct 507 TLPSLTIPAVTTPANVTVGAFDLPGLTVPSLTIPAAMTPANITVGAFDLPGLTVPSLTIP 566 Query 541 ATTTPANITVGAFNLPQLSIPSVTVPPITIPAGTALGAFNLPTLSIPSVTVPPITIPAGT 600 ATTTPANITVGAFNLPQLSIPSVTVPPITIPAGTALGAFNLPTLSIPSVTVPPITIPAGT Sbjct 567 ATTTPANITVGAFNLPQLSIPSVTVPPITIPAGTALGAFNLPTLSIPSVTVPPITIPAGT 626 Query 601 TVGGFTLPTIHTPLISTPQISIGGFSTPGIATQANSGVINLPTFSLNGITITNLVVFIPN 660 TVGGFTLPTIHTPLISTPQISIGGFSTPGIATQANSGVINLPTFSLNGITITNLVVFIPN Sbjct 627 TVGGFTLPTIHTPLISTPQISIGGFSTPGIATQANSGVINLPTFSLNGITITNLVVFIPN 686 Query 661 NITALQTNMPGVFPQIGGFANTPPAFINTGTITVGGGQINGVGFSIGAINVTPFTLPNVV 720 NITALQTNMPGVFPQIGGFANTPPAFINTGTITVGGGQINGVGFSIGAINVTPFTLPNVV Sbjct 687 NITALQTNMPGVFPQIGGFANTPPAFINTGTITVGGGQINGVGFSIGAINVTPFTLPNVV 746 Query 721 IQPWSLGGISVDGFTLPEISTQEFTTPALTISPIGVGALSLPDITTQQFTTPELTIDPIT 780 IQPWSLGGISVDGFTLPEISTQEFTTPALTISPIGVGALSLPDITTQQFTTPELTIDPIT Sbjct 747 IQPWSLGGISVDGFTLPEISTQEFTTPALTISPIGVGALSLPDITTQQFTTPELTIDPIT 806 Query 781 LGGFTLPQLSIPAITTPAFTIDPIALGGFTLPQIMTPEITTPPFAIDPIGLSGFTLPQVN 840 LGGFTLPQLSIPAITTPAFTIDPIALGGFTLPQIMTPEITTPPFAIDPIGLSGFTLPQVN Sbjct 807 LGGFTLPQLSIPAITTPAFTIDPIALGGFTLPQIMTPEITTPPFAIDPIGLSGFTLPQVN 866 Query 841 IPEITTPEFTIQPVGLAAFTTPALTIASIHLPSTTMGGFAIPAGPGYFNSSATPSLGFFN 900 IPEITTPEFTIQPVGLAAFTTPALTIASIHLPSTTMGGFAIPAGPGYFNSSATPSLGFFN Sbjct 867 IPEITTPEFTIQPVGLAAFTTPALTIASIHLPSTTMGGFAIPAGPGYFNSSATPSLGFFN 926 Query 901 AGIGGNSGFGNSGSGLSGWFNTSPVGLLAGSGYQNYGGLISGFSNLGSGISGFANTGTLP 960 AGIGGNSGFGNSGSGLSGWFNTSPVGLLAGSGYQNYGGLISGFSNLGSGISGFANTGTLP Sbjct 927 AGIGGNSGFGNSGSGLSGWFNTSPVGLLAGSGYQNYGGLISGFSNLGSGISGFANTGTLP 986 Query 961 FAVTSLVSGLANIGNNLSGLFFQSTTP 987 FAVTSLVSGLANIGNNLSGLFFQSTTP Sbjct 987 FAVTSLVSGLANIGNNLSGLFFQSTTP 1013 >gi|289443398|ref|ZP_06433142.1| PPE family protein [Mycobacterium tuberculosis T46] gi|289447534|ref|ZP_06437278.1| PPE family protein [Mycobacterium tuberculosis CPHL_A] gi|289570002|ref|ZP_06450229.1| PPE family protein [Mycobacterium tuberculosis T17] 14 more sequence titles Length=987 Score = 1832 bits (4746), Expect = 0.0, Method: Compositional matrix adjust. Identities = 986/987 (99%), Positives = 986/987 (99%), Gaps = 0/987 (0%) Query 1 MHYSVLPPEINSALIFAGAGSGPMLAAASAWDGLATELASAAVSFGSVTAGLVGGSWQGR 60 MHYSVLPPEINSALIFAGAGSGPMLAAASAWDGLATELASAAVSFGSVTAGLVGGSWQGR Sbjct 1 MHYSVLPPEINSALIFAGAGSGPMLAAASAWDGLATELASAAVSFGSVTAGLVGGSWQGR 60 Query 61 SSVAMAAAAAPYAGWLAAAATQAEQAATQAQVMVAEFEAVRLAMVQPALVAANRSGLISL 120 SSVAMAAAAAPYAGWLAAAATQAEQAATQAQVMVAEFEAVRLAMVQPALVAANRSGLISL Sbjct 61 SSVAMAAAAAPYAGWLAAAATQAEQAATQAQVMVAEFEAVRLAMVQPALVAANRSGLISL 120 Query 121 VISNLFGQNAPAIAAAEAAYEEMWALDVSAMAAYHSGASAVAVALPAFALPLRLPAGLAA 180 VISNLFGQNAPAIAAAEAAYEEMWALDVSAMAAYHSGASAVAVALPAFALPLRLPAGLAA Sbjct 121 VISNLFGQNAPAIAAAEAAYEEMWALDVSAMAAYHSGASAVAVALPAFALPLRLPAGLAA 180 Query 181 GPAAVVTALTTAVGMPTFAGRAIAASLGLANVGGGNLGNANNGLGNIGNANLGNNNLGSG 240 GPAAVVTALTTAVGMPTFAGRAIAASLGLANVGGGNLGNANNGLGNIGNANLGNNNLGSG Sbjct 181 GPAAVVTALTTAVGMPTFAGRAIAASLGLANVGGGNLGNANNGLGNIGNANLGNNNLGSG 240 Query 241 NFGSFNIGSANLGGNNIGIGNAGANNFGLANLGNLNTGFANAGIGNFGIANTGNNNIGNG 300 NFGSFNIGSANLGGNNIGIGNAGANNFGLANLGNLNTGFANAGIGNFGIANTGNNNIGNG Sbjct 241 NFGSFNIGSANLGGNNIGIGNAGANNFGLANLGNLNTGFANAGIGNFGIANTGNNNIGNG 300 Query 301 LTGNNQIGIGGLNSGNGNVGLFNAGSANIGFFNSGNGNFGIGNSGNFSTGLFNPGHGNTG 360 LTGNNQIGIGGLNSGNGNVGLFNAGSANIGFFNSGNGNFGIGNSGNFSTGLFNPGHGNTG Sbjct 301 LTGNNQIGIGGLNSGNGNVGLFNAGSANIGFFNSGNGNFGIGNSGNFSTGLFNPGHGNTG 360 Query 361 FLNAGSFNTGMFDVGNANTGSFNVGHYNFGAFNPGPSNTGTFNTGGANTGWFNTGSINTG 420 FLNAGSFNTGMFDVGNANTGSFNVGHYNFGAFNPGPSNTGTFNTGGANTGWFNTGSINTG Sbjct 361 FLNAGSFNTGMFDVGNANTGSFNVGHYNFGAFNPGPSNTGTFNTGGANTGWFNTGSINTG 420 Query 421 AFNIGDMNNGLFNTGDMNNGVFYRGVGQGSLQFAITSPDLTLPSLEIPGISVPAFSLPAI 480 AFNIGDMNNGLFNTGDMNNGVFYRGVGQGSLQFAITSPDLTLPSLEIPGISVPAFSLPAI Sbjct 421 AFNIGDMNNGLFNTGDMNNGVFYRGVGQGSLQFAITSPDLTLPSLEIPGISVPAFSLPAI 480 Query 481 TLPSLTIPAVTTPANVTVGAFDLPGLTVPSLTIPAAMTPANITVGAFDLPGLTVPSLTIP 540 TLPSLTIPAVTTPANVTVGAFDLPGLTVPSLTIPAAMTPANITVGAFDLPGLTVPSLTIP Sbjct 481 TLPSLTIPAVTTPANVTVGAFDLPGLTVPSLTIPAAMTPANITVGAFDLPGLTVPSLTIP 540 Query 541 ATTTPANITVGAFNLPQLSIPSVTVPPITIPAGTALGAFNLPTLSIPSVTVPPITIPAGT 600 ATTTPANITVGAFNLPQLSIPSVTVPPITIPAGTALGAFNLPTLSIPSVTVPPITIPAGT Sbjct 541 ATTTPANITVGAFNLPQLSIPSVTVPPITIPAGTALGAFNLPTLSIPSVTVPPITIPAGT 600 Query 601 TVGGFTLPTIHTPLISTPQISIGGFSTPGIATQANSGVINLPTFSLNGITITNLVVFIPN 660 TVGGFTLPTIHTPLISTPQISIGGFSTPGIATQANSGVINLPTFSLNGITITNLVVFIPN Sbjct 601 TVGGFTLPTIHTPLISTPQISIGGFSTPGIATQANSGVINLPTFSLNGITITNLVVFIPN 660 Query 661 NITALQTNMPGVFPQIGGFANTPPAFINTGTITVGGGQINGVGFSIGAINVTPFTLPNVV 720 NITALQTNMPGVFPQIGGFANTPPAFINTGTITVGGGQINGVGFSIGAINVTPFTLPNVV Sbjct 661 NITALQTNMPGVFPQIGGFANTPPAFINTGTITVGGGQINGVGFSIGAINVTPFTLPNVV 720 Query 721 IQPWSLGGISVDGFTLPEISTQEFTTPALTISPIGVGALSLPDITTQQFTTPELTIDPIT 780 IQPWSLGGISVDGFTLPEISTQEFTTPALTISPIGVGALSLPDITTQQFTTPELTIDPIT Sbjct 721 IQPWSLGGISVDGFTLPEISTQEFTTPALTISPIGVGALSLPDITTQQFTTPELTIDPIT 780 Query 781 LGGFTLPQLSIPAITTPAFTIDPIALGGFTLPQIMTPEITTPPFAIDPIGLSGFTLPQVN 840 LGGFTLPQLSIPAITTPAFTIDPIALGGFTLPQIMTPEITTPPFAIDPIGLSGFTLPQVN Sbjct 781 LGGFTLPQLSIPAITTPAFTIDPIALGGFTLPQIMTPEITTPPFAIDPIGLSGFTLPQVN 840 Query 841 IPEITTPEFTIQPVGLAAFTTPALTIASIHLPSTTMGGFAIPAGPGYFNSSATPSLGFFN 900 IPEITTPEFTIQPVGLAAFTTPALTIASIHLPSTTMGGFAIPAGPGYFNSSATPS GFFN Sbjct 841 IPEITTPEFTIQPVGLAAFTTPALTIASIHLPSTTMGGFAIPAGPGYFNSSATPSSGFFN 900 Query 901 AGIGGNSGFGNSGSGLSGWFNTSPVGLLAGSGYQNYGGLISGFSNLGSGISGFANTGTLP 960 AGIGGNSGFGNSGSGLSGWFNTSPVGLLAGSGYQNYGGLISGFSNLGSGISGFANTGTLP Sbjct 901 AGIGGNSGFGNSGSGLSGWFNTSPVGLLAGSGYQNYGGLISGFSNLGSGISGFANTGTLP 960 Query 961 FAVTSLVSGLANIGNNLSGLFFQSTTP 987 FAVTSLVSGLANIGNNLSGLFFQSTTP Sbjct 961 FAVTSLVSGLANIGNNLSGLFFQSTTP 987 >gi|308370866|ref|ZP_07422999.2| PPE family protein [Mycobacterium tuberculosis SUMu003] gi|308330574|gb|EFP19425.1| PPE family protein [Mycobacterium tuberculosis SUMu003] Length=987 Score = 1831 bits (4744), Expect = 0.0, Method: Compositional matrix adjust. Identities = 986/987 (99%), Positives = 986/987 (99%), Gaps = 0/987 (0%) Query 1 MHYSVLPPEINSALIFAGAGSGPMLAAASAWDGLATELASAAVSFGSVTAGLVGGSWQGR 60 MHYSVLPPEINSALIFAGAGSGPMLAAASAWDGLATELASAAVSFGSVTAGLVGGSWQGR Sbjct 1 MHYSVLPPEINSALIFAGAGSGPMLAAASAWDGLATELASAAVSFGSVTAGLVGGSWQGR 60 Query 61 SSVAMAAAAAPYAGWLAAAATQAEQAATQAQVMVAEFEAVRLAMVQPALVAANRSGLISL 120 SSVAMAAAAAPYAGWLAAAATQAEQAATQAQVMVAEFEAVRLAMVQPALVAANRSGLISL Sbjct 61 SSVAMAAAAAPYAGWLAAAATQAEQAATQAQVMVAEFEAVRLAMVQPALVAANRSGLISL 120 Query 121 VISNLFGQNAPAIAAAEAAYEEMWALDVSAMAAYHSGASAVAVALPAFALPLRLPAGLAA 180 VISNLFGQNAPAIAAAEAAYEEMWALDVSAMAAYHSGASAVAVALPAFALPLRLPAGLAA Sbjct 121 VISNLFGQNAPAIAAAEAAYEEMWALDVSAMAAYHSGASAVAVALPAFALPLRLPAGLAA 180 Query 181 GPAAVVTALTTAVGMPTFAGRAIAASLGLANVGGGNLGNANNGLGNIGNANLGNNNLGSG 240 GPAAVVTALTTAVGMPTFAGRAIAASLGLANVGGGNLGNANNGLGNIGNANLGNNNLGSG Sbjct 181 GPAAVVTALTTAVGMPTFAGRAIAASLGLANVGGGNLGNANNGLGNIGNANLGNNNLGSG 240 Query 241 NFGSFNIGSANLGGNNIGIGNAGANNFGLANLGNLNTGFANAGIGNFGIANTGNNNIGNG 300 NFGSFNIGSANLGGNNI IGNAGANNFGLANLGNLNTGFANAGIGNFGIANTGNNNIGNG Sbjct 241 NFGSFNIGSANLGGNNIDIGNAGANNFGLANLGNLNTGFANAGIGNFGIANTGNNNIGNG 300 Query 301 LTGNNQIGIGGLNSGNGNVGLFNAGSANIGFFNSGNGNFGIGNSGNFSTGLFNPGHGNTG 360 LTGNNQIGIGGLNSGNGNVGLFNAGSANIGFFNSGNGNFGIGNSGNFSTGLFNPGHGNTG Sbjct 301 LTGNNQIGIGGLNSGNGNVGLFNAGSANIGFFNSGNGNFGIGNSGNFSTGLFNPGHGNTG 360 Query 361 FLNAGSFNTGMFDVGNANTGSFNVGHYNFGAFNPGPSNTGTFNTGGANTGWFNTGSINTG 420 FLNAGSFNTGMFDVGNANTGSFNVGHYNFGAFNPGPSNTGTFNTGGANTGWFNTGSINTG Sbjct 361 FLNAGSFNTGMFDVGNANTGSFNVGHYNFGAFNPGPSNTGTFNTGGANTGWFNTGSINTG 420 Query 421 AFNIGDMNNGLFNTGDMNNGVFYRGVGQGSLQFAITSPDLTLPSLEIPGISVPAFSLPAI 480 AFNIGDMNNGLFNTGDMNNGVFYRGVGQGSLQFAITSPDLTLPSLEIPGISVPAFSLPAI Sbjct 421 AFNIGDMNNGLFNTGDMNNGVFYRGVGQGSLQFAITSPDLTLPSLEIPGISVPAFSLPAI 480 Query 481 TLPSLTIPAVTTPANVTVGAFDLPGLTVPSLTIPAAMTPANITVGAFDLPGLTVPSLTIP 540 TLPSLTIPAVTTPANVTVGAFDLPGLTVPSLTIPAAMTPANITVGAFDLPGLTVPSLTIP Sbjct 481 TLPSLTIPAVTTPANVTVGAFDLPGLTVPSLTIPAAMTPANITVGAFDLPGLTVPSLTIP 540 Query 541 ATTTPANITVGAFNLPQLSIPSVTVPPITIPAGTALGAFNLPTLSIPSVTVPPITIPAGT 600 ATTTPANITVGAFNLPQLSIPSVTVPPITIPAGTALGAFNLPTLSIPSVTVPPITIPAGT Sbjct 541 ATTTPANITVGAFNLPQLSIPSVTVPPITIPAGTALGAFNLPTLSIPSVTVPPITIPAGT 600 Query 601 TVGGFTLPTIHTPLISTPQISIGGFSTPGIATQANSGVINLPTFSLNGITITNLVVFIPN 660 TVGGFTLPTIHTPLISTPQISIGGFSTPGIATQANSGVINLPTFSLNGITITNLVVFIPN Sbjct 601 TVGGFTLPTIHTPLISTPQISIGGFSTPGIATQANSGVINLPTFSLNGITITNLVVFIPN 660 Query 661 NITALQTNMPGVFPQIGGFANTPPAFINTGTITVGGGQINGVGFSIGAINVTPFTLPNVV 720 NITALQTNMPGVFPQIGGFANTPPAFINTGTITVGGGQINGVGFSIGAINVTPFTLPNVV Sbjct 661 NITALQTNMPGVFPQIGGFANTPPAFINTGTITVGGGQINGVGFSIGAINVTPFTLPNVV 720 Query 721 IQPWSLGGISVDGFTLPEISTQEFTTPALTISPIGVGALSLPDITTQQFTTPELTIDPIT 780 IQPWSLGGISVDGFTLPEISTQEFTTPALTISPIGVGALSLPDITTQQFTTPELTIDPIT Sbjct 721 IQPWSLGGISVDGFTLPEISTQEFTTPALTISPIGVGALSLPDITTQQFTTPELTIDPIT 780 Query 781 LGGFTLPQLSIPAITTPAFTIDPIALGGFTLPQIMTPEITTPPFAIDPIGLSGFTLPQVN 840 LGGFTLPQLSIPAITTPAFTIDPIALGGFTLPQIMTPEITTPPFAIDPIGLSGFTLPQVN Sbjct 781 LGGFTLPQLSIPAITTPAFTIDPIALGGFTLPQIMTPEITTPPFAIDPIGLSGFTLPQVN 840 Query 841 IPEITTPEFTIQPVGLAAFTTPALTIASIHLPSTTMGGFAIPAGPGYFNSSATPSLGFFN 900 IPEITTPEFTIQPVGLAAFTTPALTIASIHLPSTTMGGFAIPAGPGYFNSSATPSLGFFN Sbjct 841 IPEITTPEFTIQPVGLAAFTTPALTIASIHLPSTTMGGFAIPAGPGYFNSSATPSLGFFN 900 Query 901 AGIGGNSGFGNSGSGLSGWFNTSPVGLLAGSGYQNYGGLISGFSNLGSGISGFANTGTLP 960 AGIGGNSGFGNSGSGLSGWFNTSPVGLLAGSGYQNYGGLISGFSNLGSGISGFANTGTLP Sbjct 901 AGIGGNSGFGNSGSGLSGWFNTSPVGLLAGSGYQNYGGLISGFSNLGSGISGFANTGTLP 960 Query 961 FAVTSLVSGLANIGNNLSGLFFQSTTP 987 FAVTSLVSGLANIGNNLSGLFFQSTTP Sbjct 961 FAVTSLVSGLANIGNNLSGLFFQSTTP 987 >gi|254232093|ref|ZP_04925420.1| PPE family protein [Mycobacterium tuberculosis C] gi|124601152|gb|EAY60162.1| PPE family protein [Mycobacterium tuberculosis C] Length=987 Score = 1831 bits (4744), Expect = 0.0, Method: Compositional matrix adjust. Identities = 986/987 (99%), Positives = 986/987 (99%), Gaps = 0/987 (0%) Query 1 MHYSVLPPEINSALIFAGAGSGPMLAAASAWDGLATELASAAVSFGSVTAGLVGGSWQGR 60 MHYSVLPPEINSALIFAGAGSGPMLAAASAWDGLATELASAAVSFGSVTAGLVGGSWQGR Sbjct 1 MHYSVLPPEINSALIFAGAGSGPMLAAASAWDGLATELASAAVSFGSVTAGLVGGSWQGR 60 Query 61 SSVAMAAAAAPYAGWLAAAATQAEQAATQAQVMVAEFEAVRLAMVQPALVAANRSGLISL 120 SSVAMAAAAAPYAGWLAAAATQAEQAATQAQVMVAEFEAVRLAMVQPALVAANRSGLISL Sbjct 61 SSVAMAAAAAPYAGWLAAAATQAEQAATQAQVMVAEFEAVRLAMVQPALVAANRSGLISL 120 Query 121 VISNLFGQNAPAIAAAEAAYEEMWALDVSAMAAYHSGASAVAVALPAFALPLRLPAGLAA 180 VISNLFGQNAPAIAAAEAAYEEMWALDVSAMAAYHSGASAVAVALPAFALPLRLPAGLAA Sbjct 121 VISNLFGQNAPAIAAAEAAYEEMWALDVSAMAAYHSGASAVAVALPAFALPLRLPAGLAA 180 Query 181 GPAAVVTALTTAVGMPTFAGRAIAASLGLANVGGGNLGNANNGLGNIGNANLGNNNLGSG 240 GPAAVVTALTTAVGMPTFAGRAIAASLGLANVGGGNLGNANNGLGNIGNANLGNNNLGSG Sbjct 181 GPAAVVTALTTAVGMPTFAGRAIAASLGLANVGGGNLGNANNGLGNIGNANLGNNNLGSG 240 Query 241 NFGSFNIGSANLGGNNIGIGNAGANNFGLANLGNLNTGFANAGIGNFGIANTGNNNIGNG 300 NFGSFNIGSANLGGNNIGIGNAGANNFGLANLGNLNTGFANAGIGNFGIANTGNNNIGNG Sbjct 241 NFGSFNIGSANLGGNNIGIGNAGANNFGLANLGNLNTGFANAGIGNFGIANTGNNNIGNG 300 Query 301 LTGNNQIGIGGLNSGNGNVGLFNAGSANIGFFNSGNGNFGIGNSGNFSTGLFNPGHGNTG 360 LTGNNQIGIGGLNSGNGNVGLFNAGSANIGFFNSGNGNFGIGNSGNFSTGLFNPGHGNTG Sbjct 301 LTGNNQIGIGGLNSGNGNVGLFNAGSANIGFFNSGNGNFGIGNSGNFSTGLFNPGHGNTG 360 Query 361 FLNAGSFNTGMFDVGNANTGSFNVGHYNFGAFNPGPSNTGTFNTGGANTGWFNTGSINTG 420 FLNAGSFNTGMFDVGNANTGSFNVGHYNFGAFNPGPSNTGTFNTGGANTGWFNTGSINTG Sbjct 361 FLNAGSFNTGMFDVGNANTGSFNVGHYNFGAFNPGPSNTGTFNTGGANTGWFNTGSINTG 420 Query 421 AFNIGDMNNGLFNTGDMNNGVFYRGVGQGSLQFAITSPDLTLPSLEIPGISVPAFSLPAI 480 AFNIGDMNNGLFNTGDMNNGVFYRGVGQGSLQFAITSPDLTLPSLEIPGISVPAFSLPAI Sbjct 421 AFNIGDMNNGLFNTGDMNNGVFYRGVGQGSLQFAITSPDLTLPSLEIPGISVPAFSLPAI 480 Query 481 TLPSLTIPAVTTPANVTVGAFDLPGLTVPSLTIPAAMTPANITVGAFDLPGLTVPSLTIP 540 TLPSLTIPAVTTPANVTVGAFDLPGLTVPSLTIPAAMTPANITVGAFDLPGLTVPSLTIP Sbjct 481 TLPSLTIPAVTTPANVTVGAFDLPGLTVPSLTIPAAMTPANITVGAFDLPGLTVPSLTIP 540 Query 541 ATTTPANITVGAFNLPQLSIPSVTVPPITIPAGTALGAFNLPTLSIPSVTVPPITIPAGT 600 ATTTPANITVGAFNLPQLSIPSVTVPPITIPAGTALGAFNLPTLSIPSVTVPPITIPAGT Sbjct 541 ATTTPANITVGAFNLPQLSIPSVTVPPITIPAGTALGAFNLPTLSIPSVTVPPITIPAGT 600 Query 601 TVGGFTLPTIHTPLISTPQISIGGFSTPGIATQANSGVINLPTFSLNGITITNLVVFIPN 660 TVGGFTLPTIHTPLISTPQISIG FSTPGIATQANSGVINLPTFSLNGITITNLVVFIPN Sbjct 601 TVGGFTLPTIHTPLISTPQISIGDFSTPGIATQANSGVINLPTFSLNGITITNLVVFIPN 660 Query 661 NITALQTNMPGVFPQIGGFANTPPAFINTGTITVGGGQINGVGFSIGAINVTPFTLPNVV 720 NITALQTNMPGVFPQIGGFANTPPAFINTGTITVGGGQINGVGFSIGAINVTPFTLPNVV Sbjct 661 NITALQTNMPGVFPQIGGFANTPPAFINTGTITVGGGQINGVGFSIGAINVTPFTLPNVV 720 Query 721 IQPWSLGGISVDGFTLPEISTQEFTTPALTISPIGVGALSLPDITTQQFTTPELTIDPIT 780 IQPWSLGGISVDGFTLPEISTQEFTTPALTISPIGVGALSLPDITTQQFTTPELTIDPIT Sbjct 721 IQPWSLGGISVDGFTLPEISTQEFTTPALTISPIGVGALSLPDITTQQFTTPELTIDPIT 780 Query 781 LGGFTLPQLSIPAITTPAFTIDPIALGGFTLPQIMTPEITTPPFAIDPIGLSGFTLPQVN 840 LGGFTLPQLSIPAITTPAFTIDPIALGGFTLPQIMTPEITTPPFAIDPIGLSGFTLPQVN Sbjct 781 LGGFTLPQLSIPAITTPAFTIDPIALGGFTLPQIMTPEITTPPFAIDPIGLSGFTLPQVN 840 Query 841 IPEITTPEFTIQPVGLAAFTTPALTIASIHLPSTTMGGFAIPAGPGYFNSSATPSLGFFN 900 IPEITTPEFTIQPVGLAAFTTPALTIASIHLPSTTMGGFAIPAGPGYFNSSATPSLGFFN Sbjct 841 IPEITTPEFTIQPVGLAAFTTPALTIASIHLPSTTMGGFAIPAGPGYFNSSATPSLGFFN 900 Query 901 AGIGGNSGFGNSGSGLSGWFNTSPVGLLAGSGYQNYGGLISGFSNLGSGISGFANTGTLP 960 AGIGGNSGFGNSGSGLSGWFNTSPVGLLAGSGYQNYGGLISGFSNLGSGISGFANTGTLP Sbjct 901 AGIGGNSGFGNSGSGLSGWFNTSPVGLLAGSGYQNYGGLISGFSNLGSGISGFANTGTLP 960 Query 961 FAVTSLVSGLANIGNNLSGLFFQSTTP 987 FAVTSLVSGLANIGNNLSGLFFQSTTP Sbjct 961 FAVTSLVSGLANIGNNLSGLFFQSTTP 987 >gi|289574601|ref|ZP_06454828.1| PPE family protein [Mycobacterium tuberculosis K85] gi|289539032|gb|EFD43610.1| PPE family protein [Mycobacterium tuberculosis K85] Length=987 Score = 1831 bits (4743), Expect = 0.0, Method: Compositional matrix adjust. Identities = 985/987 (99%), Positives = 985/987 (99%), Gaps = 0/987 (0%) Query 1 MHYSVLPPEINSALIFAGAGSGPMLAAASAWDGLATELASAAVSFGSVTAGLVGGSWQGR 60 MHYSVLPPEINSALIFAGAGSGPMLAAASAWDGLATELASAAVSFGSVTAGLVGGSWQGR Sbjct 1 MHYSVLPPEINSALIFAGAGSGPMLAAASAWDGLATELASAAVSFGSVTAGLVGGSWQGR 60 Query 61 SSVAMAAAAAPYAGWLAAAATQAEQAATQAQVMVAEFEAVRLAMVQPALVAANRSGLISL 120 SSVAMAAAAAPYAGWLAAAATQAEQAATQAQVMVAEFEAVRLAMVQPALVAANRSGLISL Sbjct 61 SSVAMAAAAAPYAGWLAAAATQAEQAATQAQVMVAEFEAVRLAMVQPALVAANRSGLISL 120 Query 121 VISNLFGQNAPAIAAAEAAYEEMWALDVSAMAAYHSGASAVAVALPAFALPLRLPAGLAA 180 VISNLFGQNAPAIAAAEAAYEEMWALDVSAMAAYHSGASAVAVALPAFALPLRLPAGLAA Sbjct 121 VISNLFGQNAPAIAAAEAAYEEMWALDVSAMAAYHSGASAVAVALPAFALPLRLPAGLAA 180 Query 181 GPAAVVTALTTAVGMPTFAGRAIAASLGLANVGGGNLGNANNGLGNIGNANLGNNNLGSG 240 GPAAVVTALTTAVGMPTFAGRAIAASLGLANVGGGNLGNANNGLGNIGNANLGNNNLGSG Sbjct 181 GPAAVVTALTTAVGMPTFAGRAIAASLGLANVGGGNLGNANNGLGNIGNANLGNNNLGSG 240 Query 241 NFGSFNIGSANLGGNNIGIGNAGANNFGLANLGNLNTGFANAGIGNFGIANTGNNNIGNG 300 NFGSFNIGSANLGGNNIGIGNAGANNFGLANLGNLNTGFANAGIGNFGIANTGNNNIGNG Sbjct 241 NFGSFNIGSANLGGNNIGIGNAGANNFGLANLGNLNTGFANAGIGNFGIANTGNNNIGNG 300 Query 301 LTGNNQIGIGGLNSGNGNVGLFNAGSANIGFFNSGNGNFGIGNSGNFSTGLFNPGHGNTG 360 LTGNNQIGIGGLNSGNGNVGLFNAGSANIGFFNSGNGNFGIGNSGNFSTGLFNPGHGNTG Sbjct 301 LTGNNQIGIGGLNSGNGNVGLFNAGSANIGFFNSGNGNFGIGNSGNFSTGLFNPGHGNTG 360 Query 361 FLNAGSFNTGMFDVGNANTGSFNVGHYNFGAFNPGPSNTGTFNTGGANTGWFNTGSINTG 420 FLNAGSFNTGMFDVGNANTGSFNVGHYNFGAFNPGPSNTGTFNTGGANTGWFNTGSINTG Sbjct 361 FLNAGSFNTGMFDVGNANTGSFNVGHYNFGAFNPGPSNTGTFNTGGANTGWFNTGSINTG 420 Query 421 AFNIGDMNNGLFNTGDMNNGVFYRGVGQGSLQFAITSPDLTLPSLEIPGISVPAFSLPAI 480 AFNIGDMNNGLFNTGDMNNGVFYRGVGQGSLQFAITSPDLTLPSLEIPGISVPAFSLPAI Sbjct 421 AFNIGDMNNGLFNTGDMNNGVFYRGVGQGSLQFAITSPDLTLPSLEIPGISVPAFSLPAI 480 Query 481 TLPSLTIPAVTTPANVTVGAFDLPGLTVPSLTIPAAMTPANITVGAFDLPGLTVPSLTIP 540 TLPSLTIPAVTTPANVTVGAFDLPGLTVPSLTIPAAMTPANITVGAFDLPGLTVPSLTIP Sbjct 481 TLPSLTIPAVTTPANVTVGAFDLPGLTVPSLTIPAAMTPANITVGAFDLPGLTVPSLTIP 540 Query 541 ATTTPANITVGAFNLPQLSIPSVTVPPITIPAGTALGAFNLPTLSIPSVTVPPITIPAGT 600 ATTTPANITVGAFNLPQLSIPSVTVPPITIPAGTALGAFNLPTLSIPSVTVPPITIPAGT Sbjct 541 ATTTPANITVGAFNLPQLSIPSVTVPPITIPAGTALGAFNLPTLSIPSVTVPPITIPAGT 600 Query 601 TVGGFTLPTIHTPLISTPQISIGGFSTPGIATQANSGVINLPTFSLNGITITNLVVFIPN 660 TVGGFTLPTIHTPLISTPQISIGGFST GIATQANSGVINLPTFSLNGITITNLVVFIPN Sbjct 601 TVGGFTLPTIHTPLISTPQISIGGFSTTGIATQANSGVINLPTFSLNGITITNLVVFIPN 660 Query 661 NITALQTNMPGVFPQIGGFANTPPAFINTGTITVGGGQINGVGFSIGAINVTPFTLPNVV 720 NITALQTNMPGVFPQIGGFANTPPAFINTGTITVGGGQINGVGFSIGAINVTPFTLPNVV Sbjct 661 NITALQTNMPGVFPQIGGFANTPPAFINTGTITVGGGQINGVGFSIGAINVTPFTLPNVV 720 Query 721 IQPWSLGGISVDGFTLPEISTQEFTTPALTISPIGVGALSLPDITTQQFTTPELTIDPIT 780 IQPWSLGGISVDGFTLPEISTQEFTTPALTISPIGVGALSLPDITTQQFTTPELTIDPIT Sbjct 721 IQPWSLGGISVDGFTLPEISTQEFTTPALTISPIGVGALSLPDITTQQFTTPELTIDPIT 780 Query 781 LGGFTLPQLSIPAITTPAFTIDPIALGGFTLPQIMTPEITTPPFAIDPIGLSGFTLPQVN 840 LGGFTLPQLSIPAITTPAFTIDPIALGGFTLPQIMTPEITTPPFAIDPIGLSGFTLPQVN Sbjct 781 LGGFTLPQLSIPAITTPAFTIDPIALGGFTLPQIMTPEITTPPFAIDPIGLSGFTLPQVN 840 Query 841 IPEITTPEFTIQPVGLAAFTTPALTIASIHLPSTTMGGFAIPAGPGYFNSSATPSLGFFN 900 IPEITTPEFTIQPVGLAAFTTPALTIASIHLPSTTMGGFAIPAGPGYFNSSATPS GFFN Sbjct 841 IPEITTPEFTIQPVGLAAFTTPALTIASIHLPSTTMGGFAIPAGPGYFNSSATPSSGFFN 900 Query 901 AGIGGNSGFGNSGSGLSGWFNTSPVGLLAGSGYQNYGGLISGFSNLGSGISGFANTGTLP 960 AGIGGNSGFGNSGSGLSGWFNTSPVGLLAGSGYQNYGGLISGFSNLGSGISGFANTGTLP Sbjct 901 AGIGGNSGFGNSGSGLSGWFNTSPVGLLAGSGYQNYGGLISGFSNLGSGISGFANTGTLP 960 Query 961 FAVTSLVSGLANIGNNLSGLFFQSTTP 987 FAVTSLVSGLANIGNNLSGLFFQSTTP Sbjct 961 FAVTSLVSGLANIGNNLSGLFFQSTTP 987 >gi|289754014|ref|ZP_06513392.1| predicted protein [Mycobacterium tuberculosis EAS054] gi|289694601|gb|EFD62030.1| predicted protein [Mycobacterium tuberculosis EAS054] Length=987 Score = 1829 bits (4737), Expect = 0.0, Method: Compositional matrix adjust. Identities = 985/987 (99%), Positives = 985/987 (99%), Gaps = 0/987 (0%) Query 1 MHYSVLPPEINSALIFAGAGSGPMLAAASAWDGLATELASAAVSFGSVTAGLVGGSWQGR 60 MHYSVLPPEINSALIFAGAGSGPMLAAASAWDGLATELASAAVSFGSVTAGLVGGSWQGR Sbjct 1 MHYSVLPPEINSALIFAGAGSGPMLAAASAWDGLATELASAAVSFGSVTAGLVGGSWQGR 60 Query 61 SSVAMAAAAAPYAGWLAAAATQAEQAATQAQVMVAEFEAVRLAMVQPALVAANRSGLISL 120 SSVAMAAAAAPYAGWLAAAATQAEQAATQAQVMVAEFEAVRLAMVQPALVAANRSGLISL Sbjct 61 SSVAMAAAAAPYAGWLAAAATQAEQAATQAQVMVAEFEAVRLAMVQPALVAANRSGLISL 120 Query 121 VISNLFGQNAPAIAAAEAAYEEMWALDVSAMAAYHSGASAVAVALPAFALPLRLPAGLAA 180 VISNLFGQNAPAIAAAEAAYEEMWALDVSAMAAYHSGASAVAVALPAFALPLRLPAGLAA Sbjct 121 VISNLFGQNAPAIAAAEAAYEEMWALDVSAMAAYHSGASAVAVALPAFALPLRLPAGLAA 180 Query 181 GPAAVVTALTTAVGMPTFAGRAIAASLGLANVGGGNLGNANNGLGNIGNANLGNNNLGSG 240 GPAAVVTALTTAVGMPTFAGRAIAASLGLANVGGGNLGNANNGLGNIGNANLGNNNLGSG Sbjct 181 GPAAVVTALTTAVGMPTFAGRAIAASLGLANVGGGNLGNANNGLGNIGNANLGNNNLGSG 240 Query 241 NFGSFNIGSANLGGNNIGIGNAGANNFGLANLGNLNTGFANAGIGNFGIANTGNNNIGNG 300 NFGSFNIGSANLGGNNIGIGNAGANNFGLANLGNLNTGFANAGIGNFGIANTGNNNIGNG Sbjct 241 NFGSFNIGSANLGGNNIGIGNAGANNFGLANLGNLNTGFANAGIGNFGIANTGNNNIGNG 300 Query 301 LTGNNQIGIGGLNSGNGNVGLFNAGSANIGFFNSGNGNFGIGNSGNFSTGLFNPGHGNTG 360 LTGNNQIGIGGLNSGNGNVGLFNAGSANIGFFNSGNGNFGIGNSGNFSTGLFNPGHGNTG Sbjct 301 LTGNNQIGIGGLNSGNGNVGLFNAGSANIGFFNSGNGNFGIGNSGNFSTGLFNPGHGNTG 360 Query 361 FLNAGSFNTGMFDVGNANTGSFNVGHYNFGAFNPGPSNTGTFNTGGANTGWFNTGSINTG 420 FLNAGSFNTGMFDVGNANTGSFNVGHYNFGAFNPGPSNTGTFNTGGANTGWFNTGSINTG Sbjct 361 FLNAGSFNTGMFDVGNANTGSFNVGHYNFGAFNPGPSNTGTFNTGGANTGWFNTGSINTG 420 Query 421 AFNIGDMNNGLFNTGDMNNGVFYRGVGQGSLQFAITSPDLTLPSLEIPGISVPAFSLPAI 480 AFNIGDMNNGLFNTGDMNNGVFYRGVGQGSLQFAITSPDLTLPSLEIPGISVPAFSLPAI Sbjct 421 AFNIGDMNNGLFNTGDMNNGVFYRGVGQGSLQFAITSPDLTLPSLEIPGISVPAFSLPAI 480 Query 481 TLPSLTIPAVTTPANVTVGAFDLPGLTVPSLTIPAAMTPANITVGAFDLPGLTVPSLTIP 540 TLPSLTIPAVTTPANVTVGAFDLPGLTVPSLTIPAAMTPANITVGAFDLPGLTVPSLTIP Sbjct 481 TLPSLTIPAVTTPANVTVGAFDLPGLTVPSLTIPAAMTPANITVGAFDLPGLTVPSLTIP 540 Query 541 ATTTPANITVGAFNLPQLSIPSVTVPPITIPAGTALGAFNLPTLSIPSVTVPPITIPAGT 600 ATTTPANITVGAFNLPQLSIPSVTVPPITIPAGTALGAFNLPTLSIPSVTVPPITIPAGT Sbjct 541 ATTTPANITVGAFNLPQLSIPSVTVPPITIPAGTALGAFNLPTLSIPSVTVPPITIPAGT 600 Query 601 TVGGFTLPTIHTPLISTPQISIGGFSTPGIATQANSGVINLPTFSLNGITITNLVVFIPN 660 TVGGFTLPTIHTPLISTPQISIGGFSTPGIATQANSGVINLPTFSLNGITITNLVVFIPN Sbjct 601 TVGGFTLPTIHTPLISTPQISIGGFSTPGIATQANSGVINLPTFSLNGITITNLVVFIPN 660 Query 661 NITALQTNMPGVFPQIGGFANTPPAFINTGTITVGGGQINGVGFSIGAINVTPFTLPNVV 720 NITALQTNMPGVFPQIGGFANTPPAFINTGTITVGGGQINGVGFSIGAINVTPFTLPNVV Sbjct 661 NITALQTNMPGVFPQIGGFANTPPAFINTGTITVGGGQINGVGFSIGAINVTPFTLPNVV 720 Query 721 IQPWSLGGISVDGFTLPEISTQEFTTPALTISPIGVGALSLPDITTQQFTTPELTIDPIT 780 IQPWSLGGISVDGFTLPEISTQEFTTPALTISPIGVGALSLPDITTQQFTTPELTIDPIT Sbjct 721 IQPWSLGGISVDGFTLPEISTQEFTTPALTISPIGVGALSLPDITTQQFTTPELTIDPIT 780 Query 781 LGGFTLPQLSIPAITTPAFTIDPIALGGFTLPQIMTPEITTPPFAIDPIGLSGFTLPQVN 840 LGGFTLPQLSIPAITTPAFTIDPIALGGFTLPQIMTPEITTPPFAIDPIGLSGFTLPQVN Sbjct 781 LGGFTLPQLSIPAITTPAFTIDPIALGGFTLPQIMTPEITTPPFAIDPIGLSGFTLPQVN 840 Query 841 IPEITTPEFTIQPVGLAAFTTPALTIASIHLPSTTMGGFAIPAGPGYFNSSATPSLGFFN 900 IPEITTPEFTIQPVGLAAFTTPALTIASIHLPSTTM GFAIPAGPGYFNSSATPS GFFN Sbjct 841 IPEITTPEFTIQPVGLAAFTTPALTIASIHLPSTTMDGFAIPAGPGYFNSSATPSSGFFN 900 Query 901 AGIGGNSGFGNSGSGLSGWFNTSPVGLLAGSGYQNYGGLISGFSNLGSGISGFANTGTLP 960 AGIGGNSGFGNSGSGLSGWFNTSPVGLLAGSGYQNYGGLISGFSNLGSGISGFANTGTLP Sbjct 901 AGIGGNSGFGNSGSGLSGWFNTSPVGLLAGSGYQNYGGLISGFSNLGSGISGFANTGTLP 960 Query 961 FAVTSLVSGLANIGNNLSGLFFQSTTP 987 FAVTSLVSGLANIGNNLSGLFFQSTTP Sbjct 961 FAVTSLVSGLANIGNNLSGLFFQSTTP 987 >gi|294996836|ref|ZP_06802527.1| PPE family protein [Mycobacterium tuberculosis 210] Length=1013 Score = 1827 bits (4733), Expect = 0.0, Method: Compositional matrix adjust. Identities = 982/987 (99%), Positives = 982/987 (99%), Gaps = 0/987 (0%) Query 1 MHYSVLPPEINSALIFAGAGSGPMLAAASAWDGLATELASAAVSFGSVTAGLVGGSWQGR 60 MHYSVLPPEINSALIFAGAGSGPMLAAASAWDGLATELASAAVSFGSVTAGLVGGSWQGR Sbjct 27 MHYSVLPPEINSALIFAGAGSGPMLAAASAWDGLATELASAAVSFGSVTAGLVGGSWQGR 86 Query 61 SSVAMAAAAAPYAGWLAAAATQAEQAATQAQVMVAEFEAVRLAMVQPALVAANRSGLISL 120 SSVAMAAAAAPYAGWLAAAATQAEQAATQAQVMVAEFEAVRLAMVQPALVAANRSGLISL Sbjct 87 SSVAMAAAAAPYAGWLAAAATQAEQAATQAQVMVAEFEAVRLAMVQPALVAANRSGLISL 146 Query 121 VISNLFGQNAPAIAAAEAAYEEMWALDVSAMAAYHSGASAVAVALPAFALPLRLPAGLAA 180 VISNLFGQNAPAIAAAEAAYEEMWALDVSAMAAYHSGASAVAVALPAFALPLRLPAGLAA Sbjct 147 VISNLFGQNAPAIAAAEAAYEEMWALDVSAMAAYHSGASAVAVALPAFALPLRLPAGLAA 206 Query 181 GPAAVVTALTTAVGMPTFAGRAIAASLGLANVGGGNLGNANNGLGNIGNANLGNNNLGSG 240 GPAAVVTALTTAVGMPTFAGRAIAASLGLANVGGGNLGNANNGLGNIGNANLGNNNLGSG Sbjct 207 GPAAVVTALTTAVGMPTFAGRAIAASLGLANVGGGNLGNANNGLGNIGNANLGNNNLGSG 266 Query 241 NFGSFNIGSANLGGNNIGIGNAGANNFGLANLGNLNTGFANAGIGNFGIANTGNNNIGNG 300 NFGSFNIGSANLGGNNIGIGNAGANNFGLANLGNLNTGFANAGIGNFGIANTGNNNIGNG Sbjct 267 NFGSFNIGSANLGGNNIGIGNAGANNFGLANLGNLNTGFANAGIGNFGIANTGNNNIGNG 326 Query 301 LTGNNQIGIGGLNSGNGNVGLFNAGSANIGFFNSGNGNFGIGNSGNFSTGLFNPGHGNTG 360 LTGNNQIGIGGLNSGNGNVGLFNAGSANIGFFNSGNGNFGIGNSGNFSTGLFNPGHGNTG Sbjct 327 LTGNNQIGIGGLNSGNGNVGLFNAGSANIGFFNSGNGNFGIGNSGNFSTGLFNPGHGNTG 386 Query 361 FLNAGSFNTGMFDVGNANTGSFNVGHYNFGAFNPGPSNTGTFNTGGANTGWFNTGSINTG 420 FLNAGSFNTGMFDVGNANTGSFNVGHYNFGAFNPGPSNTGTFNTGGANTGWFNTGSINTG Sbjct 387 FLNAGSFNTGMFDVGNANTGSFNVGHYNFGAFNPGPSNTGTFNTGGANTGWFNTGSINTG 446 Query 421 AFNIGDMNNGLFNTGDMNNGVFYRGVGQGSLQFAITSPDLTLPSLEIPGISVPAFSLPAI 480 AFNIGDMNNGLFNTGDMNNGVFYRGVGQGSLQFAITSPDLTLPSLEIPGISVPAFSLPAI Sbjct 447 AFNIGDMNNGLFNTGDMNNGVFYRGVGQGSLQFAITSPDLTLPSLEIPGISVPAFSLPAI 506 Query 481 TLPSLTIPAVTTPANVTVGAFDLPGLTVPSLTIPAAMTPANITVGAFDLPGLTVPSLTIP 540 TLPSLTIPAVTTPANVTVGAFDLPGLTVPSLTIPAAMTPANITVGAFDLPGLTVPSLTIP Sbjct 507 TLPSLTIPAVTTPANVTVGAFDLPGLTVPSLTIPAAMTPANITVGAFDLPGLTVPSLTIP 566 Query 541 ATTTPANITVGAFNLPQLSIPSVTVPPITIPAGTALGAFNLPTLSIPSVTVPPITIPAGT 600 ATTTPANITVGAFNLPQLSIPSVTVPPITIPAGTALGAFNLPTLSIPSVTVPPITIPAGT Sbjct 567 ATTTPANITVGAFNLPQLSIPSVTVPPITIPAGTALGAFNLPTLSIPSVTVPPITIPAGT 626 Query 601 TVGGFTLPTIHTPLISTPQISIGGFSTPGIATQANSGVINLPTFSLNGITITNLVVFIPN 660 TVGGFTLPTIHTPLISTPQISIGGFSTPGIATQA SGVINLPTFSLNGITI NLVVFIP Sbjct 627 TVGGFTLPTIHTPLISTPQISIGGFSTPGIATQAISGVINLPTFSLNGITILNLVVFIPT 686 Query 661 NITALQTNMPGVFPQIGGFANTPPAFINTGTITVGGGQINGVGFSIGAINVTPFTLPNVV 720 NITA QTNMPGVFPQIGGFANTPPAFINTGTITVGGGQINGVGFSIGAINVTPFTLPNVV Sbjct 687 NITACQTNMPGVFPQIGGFANTPPAFINTGTITVGGGQINGVGFSIGAINVTPFTLPNVV 746 Query 721 IQPWSLGGISVDGFTLPEISTQEFTTPALTISPIGVGALSLPDITTQQFTTPELTIDPIT 780 IQPWSLGGISVDGFTLPEISTQEFTTPALTISPIGVGALSLPDITTQQFTTPELTIDPIT Sbjct 747 IQPWSLGGISVDGFTLPEISTQEFTTPALTISPIGVGALSLPDITTQQFTTPELTIDPIT 806 Query 781 LGGFTLPQLSIPAITTPAFTIDPIALGGFTLPQIMTPEITTPPFAIDPIGLSGFTLPQVN 840 LGGFTLPQLSIPAITTPAFTIDPIALGGFTLPQIMTPEITTPPFAIDPIGLSGFTLPQVN Sbjct 807 LGGFTLPQLSIPAITTPAFTIDPIALGGFTLPQIMTPEITTPPFAIDPIGLSGFTLPQVN 866 Query 841 IPEITTPEFTIQPVGLAAFTTPALTIASIHLPSTTMGGFAIPAGPGYFNSSATPSLGFFN 900 IPEITTPEFTIQPVGLAAFTTPALTIASIHLPSTTMGGFAIPAGPGYFNSSATPS GFFN Sbjct 867 IPEITTPEFTIQPVGLAAFTTPALTIASIHLPSTTMGGFAIPAGPGYFNSSATPSSGFFN 926 Query 901 AGIGGNSGFGNSGSGLSGWFNTSPVGLLAGSGYQNYGGLISGFSNLGSGISGFANTGTLP 960 AGIGGNSGFGNSGSGLSGWFNTSPVGLLAGSGYQNYGGLISGFSNLGSGISGFANTGTLP Sbjct 927 AGIGGNSGFGNSGSGLSGWFNTSPVGLLAGSGYQNYGGLISGFSNLGSGISGFANTGTLP 986 Query 961 FAVTSLVSGLANIGNNLSGLFFQSTTP 987 FAVTSLVSGLANIGNNLSGLFFQSTTP Sbjct 987 FAVTSLVSGLANIGNNLSGLFFQSTTP 1013 >gi|254550934|ref|ZP_05141381.1| PPE family protein [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|308231986|ref|ZP_07414481.2| PPE family protein [Mycobacterium tuberculosis SUMu001] gi|308380228|ref|ZP_07489133.2| PPE family protein [Mycobacterium tuberculosis SUMu011] gi|308215385|gb|EFO74784.1| PPE family protein [Mycobacterium tuberculosis SUMu001] gi|308362192|gb|EFP51043.1| PPE family protein [Mycobacterium tuberculosis SUMu011] Length=983 Score = 1822 bits (4719), Expect = 0.0, Method: Compositional matrix adjust. Identities = 982/983 (99%), Positives = 983/983 (100%), Gaps = 0/983 (0%) Query 5 VLPPEINSALIFAGAGSGPMLAAASAWDGLATELASAAVSFGSVTAGLVGGSWQGRSSVA 64 +LPPEINSALIFAGAGSGPMLAAASAWDGLATELASAAVSFGSVTAGLVGGSWQGRSSVA Sbjct 1 MLPPEINSALIFAGAGSGPMLAAASAWDGLATELASAAVSFGSVTAGLVGGSWQGRSSVA 60 Query 65 MAAAAAPYAGWLAAAATQAEQAATQAQVMVAEFEAVRLAMVQPALVAANRSGLISLVISN 124 MAAAAAPYAGWLAAAATQAEQAATQAQVMVAEFEAVRLAMVQPALVAANRSGLISLVISN Sbjct 61 MAAAAAPYAGWLAAAATQAEQAATQAQVMVAEFEAVRLAMVQPALVAANRSGLISLVISN 120 Query 125 LFGQNAPAIAAAEAAYEEMWALDVSAMAAYHSGASAVAVALPAFALPLRLPAGLAAGPAA 184 LFGQNAPAIAAAEAAYEEMWALDVSAMAAYHSGASAVAVALPAFALPLRLPAGLAAGPAA Sbjct 121 LFGQNAPAIAAAEAAYEEMWALDVSAMAAYHSGASAVAVALPAFALPLRLPAGLAAGPAA 180 Query 185 VVTALTTAVGMPTFAGRAIAASLGLANVGGGNLGNANNGLGNIGNANLGNNNLGSGNFGS 244 VVTALTTAVGMPTFAGRAIAASLGLANVGGGNLGNANNGLGNIGNANLGNNNLGSGNFGS Sbjct 181 VVTALTTAVGMPTFAGRAIAASLGLANVGGGNLGNANNGLGNIGNANLGNNNLGSGNFGS 240 Query 245 FNIGSANLGGNNIGIGNAGANNFGLANLGNLNTGFANAGIGNFGIANTGNNNIGNGLTGN 304 FNIGSANLGGNNIGIGNAGANNFGLANLGNLNTGFANAGIGNFGIANTGNNNIGNGLTGN Sbjct 241 FNIGSANLGGNNIGIGNAGANNFGLANLGNLNTGFANAGIGNFGIANTGNNNIGNGLTGN 300 Query 305 NQIGIGGLNSGNGNVGLFNAGSANIGFFNSGNGNFGIGNSGNFSTGLFNPGHGNTGFLNA 364 NQIGIGGLNSGNGNVGLFNAGSANIGFFNSGNGNFGIGNSGNFSTGLFNPGHGNTGFLNA Sbjct 301 NQIGIGGLNSGNGNVGLFNAGSANIGFFNSGNGNFGIGNSGNFSTGLFNPGHGNTGFLNA 360 Query 365 GSFNTGMFDVGNANTGSFNVGHYNFGAFNPGPSNTGTFNTGGANTGWFNTGSINTGAFNI 424 GSFNTGMFDVGNANTGSFNVGHYNFGAFNPGPSNTGTFNTGGANTGWFNTGSINTGAFNI Sbjct 361 GSFNTGMFDVGNANTGSFNVGHYNFGAFNPGPSNTGTFNTGGANTGWFNTGSINTGAFNI 420 Query 425 GDMNNGLFNTGDMNNGVFYRGVGQGSLQFAITSPDLTLPSLEIPGISVPAFSLPAITLPS 484 GDMNNGLFNTGDMNNGVFYRGVGQGSLQFAITSPDLTLPSLEIPGISVPAFSLPAITLPS Sbjct 421 GDMNNGLFNTGDMNNGVFYRGVGQGSLQFAITSPDLTLPSLEIPGISVPAFSLPAITLPS 480 Query 485 LTIPAVTTPANVTVGAFDLPGLTVPSLTIPAAMTPANITVGAFDLPGLTVPSLTIPATTT 544 LTIPAVTTPANVTVGAFDLPGLTVPSLTIPAAMTPANITVGAFDLPGLTVPSLTIPATTT Sbjct 481 LTIPAVTTPANVTVGAFDLPGLTVPSLTIPAAMTPANITVGAFDLPGLTVPSLTIPATTT 540 Query 545 PANITVGAFNLPQLSIPSVTVPPITIPAGTALGAFNLPTLSIPSVTVPPITIPAGTTVGG 604 PANITVGAFNLPQLSIPSVTVPPITIPAGTALGAFNLPTLSIPSVTVPPITIPAGTTVGG Sbjct 541 PANITVGAFNLPQLSIPSVTVPPITIPAGTALGAFNLPTLSIPSVTVPPITIPAGTTVGG 600 Query 605 FTLPTIHTPLISTPQISIGGFSTPGIATQANSGVINLPTFSLNGITITNLVVFIPNNITA 664 FTLPTIHTPLISTPQISIGGFSTPGIATQANSGVINLPTFSLNGITITNLVVFIPNNITA Sbjct 601 FTLPTIHTPLISTPQISIGGFSTPGIATQANSGVINLPTFSLNGITITNLVVFIPNNITA 660 Query 665 LQTNMPGVFPQIGGFANTPPAFINTGTITVGGGQINGVGFSIGAINVTPFTLPNVVIQPW 724 LQTNMPGVFPQIGGFANTPPAFINTGTITVGGGQINGVGFSIGAINVTPFTLPNVVIQPW Sbjct 661 LQTNMPGVFPQIGGFANTPPAFINTGTITVGGGQINGVGFSIGAINVTPFTLPNVVIQPW 720 Query 725 SLGGISVDGFTLPEISTQEFTTPALTISPIGVGALSLPDITTQQFTTPELTIDPITLGGF 784 SLGGISVDGFTLPEISTQEFTTPALTISPIGVGALSLPDITTQQFTTPELTIDPITLGGF Sbjct 721 SLGGISVDGFTLPEISTQEFTTPALTISPIGVGALSLPDITTQQFTTPELTIDPITLGGF 780 Query 785 TLPQLSIPAITTPAFTIDPIALGGFTLPQIMTPEITTPPFAIDPIGLSGFTLPQVNIPEI 844 TLPQLSIPAITTPAFTIDPIALGGFTLPQIMTPEITTPPFAIDPIGLSGFTLPQVNIPEI Sbjct 781 TLPQLSIPAITTPAFTIDPIALGGFTLPQIMTPEITTPPFAIDPIGLSGFTLPQVNIPEI 840 Query 845 TTPEFTIQPVGLAAFTTPALTIASIHLPSTTMGGFAIPAGPGYFNSSATPSLGFFNAGIG 904 TTPEFTIQPVGLAAFTTPALTIASIHLPSTTMGGFAIPAGPGYFNSSATPSLGFFNAGIG Sbjct 841 TTPEFTIQPVGLAAFTTPALTIASIHLPSTTMGGFAIPAGPGYFNSSATPSLGFFNAGIG 900 Query 905 GNSGFGNSGSGLSGWFNTSPVGLLAGSGYQNYGGLISGFSNLGSGISGFANTGTLPFAVT 964 GNSGFGNSGSGLSGWFNTSPVGLLAGSGYQNYGGLISGFSNLGSGISGFANTGTLPFAVT Sbjct 901 GNSGFGNSGSGLSGWFNTSPVGLLAGSGYQNYGGLISGFSNLGSGISGFANTGTLPFAVT 960 Query 965 SLVSGLANIGNNLSGLFFQSTTP 987 SLVSGLANIGNNLSGLFFQSTTP Sbjct 961 SLVSGLANIGNNLSGLFFQSTTP 983 >gi|306779927|ref|ZP_07418264.1| PPE family protein [Mycobacterium tuberculosis SUMu002] gi|306793369|ref|ZP_07431671.1| PPE family protein [Mycobacterium tuberculosis SUMu005] gi|308372093|ref|ZP_07427356.2| PPE family protein [Mycobacterium tuberculosis SUMu004] 9 more sequence titles Length=983 Score = 1820 bits (4714), Expect = 0.0, Method: Compositional matrix adjust. Identities = 981/983 (99%), Positives = 982/983 (99%), Gaps = 0/983 (0%) Query 5 VLPPEINSALIFAGAGSGPMLAAASAWDGLATELASAAVSFGSVTAGLVGGSWQGRSSVA 64 +LPPEINSALIFAGAGSGPMLAAASAWDGLATELASAAVSFGSVTAGLVGGSWQGRSSVA Sbjct 1 MLPPEINSALIFAGAGSGPMLAAASAWDGLATELASAAVSFGSVTAGLVGGSWQGRSSVA 60 Query 65 MAAAAAPYAGWLAAAATQAEQAATQAQVMVAEFEAVRLAMVQPALVAANRSGLISLVISN 124 MAAAAAPYAGWLAAAATQAEQAATQAQVMVAEFEAVRLAMVQPALVAANRSGLISLVISN Sbjct 61 MAAAAAPYAGWLAAAATQAEQAATQAQVMVAEFEAVRLAMVQPALVAANRSGLISLVISN 120 Query 125 LFGQNAPAIAAAEAAYEEMWALDVSAMAAYHSGASAVAVALPAFALPLRLPAGLAAGPAA 184 LFGQNAPAIAAAEAAYEEMWALDVSAMAAYHSGASAVAVALPAFALPLRLPAGLAAGPAA Sbjct 121 LFGQNAPAIAAAEAAYEEMWALDVSAMAAYHSGASAVAVALPAFALPLRLPAGLAAGPAA 180 Query 185 VVTALTTAVGMPTFAGRAIAASLGLANVGGGNLGNANNGLGNIGNANLGNNNLGSGNFGS 244 VVTALTTAVGMPTFAGRAIAASLGLANVGGGNLGNANNGLGNIGNANLGNNNLGSGNFGS Sbjct 181 VVTALTTAVGMPTFAGRAIAASLGLANVGGGNLGNANNGLGNIGNANLGNNNLGSGNFGS 240 Query 245 FNIGSANLGGNNIGIGNAGANNFGLANLGNLNTGFANAGIGNFGIANTGNNNIGNGLTGN 304 FNIGSANLGGNNI IGNAGANNFGLANLGNLNTGFANAGIGNFGIANTGNNNIGNGLTGN Sbjct 241 FNIGSANLGGNNIDIGNAGANNFGLANLGNLNTGFANAGIGNFGIANTGNNNIGNGLTGN 300 Query 305 NQIGIGGLNSGNGNVGLFNAGSANIGFFNSGNGNFGIGNSGNFSTGLFNPGHGNTGFLNA 364 NQIGIGGLNSGNGNVGLFNAGSANIGFFNSGNGNFGIGNSGNFSTGLFNPGHGNTGFLNA Sbjct 301 NQIGIGGLNSGNGNVGLFNAGSANIGFFNSGNGNFGIGNSGNFSTGLFNPGHGNTGFLNA 360 Query 365 GSFNTGMFDVGNANTGSFNVGHYNFGAFNPGPSNTGTFNTGGANTGWFNTGSINTGAFNI 424 GSFNTGMFDVGNANTGSFNVGHYNFGAFNPGPSNTGTFNTGGANTGWFNTGSINTGAFNI Sbjct 361 GSFNTGMFDVGNANTGSFNVGHYNFGAFNPGPSNTGTFNTGGANTGWFNTGSINTGAFNI 420 Query 425 GDMNNGLFNTGDMNNGVFYRGVGQGSLQFAITSPDLTLPSLEIPGISVPAFSLPAITLPS 484 GDMNNGLFNTGDMNNGVFYRGVGQGSLQFAITSPDLTLPSLEIPGISVPAFSLPAITLPS Sbjct 421 GDMNNGLFNTGDMNNGVFYRGVGQGSLQFAITSPDLTLPSLEIPGISVPAFSLPAITLPS 480 Query 485 LTIPAVTTPANVTVGAFDLPGLTVPSLTIPAAMTPANITVGAFDLPGLTVPSLTIPATTT 544 LTIPAVTTPANVTVGAFDLPGLTVPSLTIPAAMTPANITVGAFDLPGLTVPSLTIPATTT Sbjct 481 LTIPAVTTPANVTVGAFDLPGLTVPSLTIPAAMTPANITVGAFDLPGLTVPSLTIPATTT 540 Query 545 PANITVGAFNLPQLSIPSVTVPPITIPAGTALGAFNLPTLSIPSVTVPPITIPAGTTVGG 604 PANITVGAFNLPQLSIPSVTVPPITIPAGTALGAFNLPTLSIPSVTVPPITIPAGTTVGG Sbjct 541 PANITVGAFNLPQLSIPSVTVPPITIPAGTALGAFNLPTLSIPSVTVPPITIPAGTTVGG 600 Query 605 FTLPTIHTPLISTPQISIGGFSTPGIATQANSGVINLPTFSLNGITITNLVVFIPNNITA 664 FTLPTIHTPLISTPQISIGGFSTPGIATQANSGVINLPTFSLNGITITNLVVFIPNNITA Sbjct 601 FTLPTIHTPLISTPQISIGGFSTPGIATQANSGVINLPTFSLNGITITNLVVFIPNNITA 660 Query 665 LQTNMPGVFPQIGGFANTPPAFINTGTITVGGGQINGVGFSIGAINVTPFTLPNVVIQPW 724 LQTNMPGVFPQIGGFANTPPAFINTGTITVGGGQINGVGFSIGAINVTPFTLPNVVIQPW Sbjct 661 LQTNMPGVFPQIGGFANTPPAFINTGTITVGGGQINGVGFSIGAINVTPFTLPNVVIQPW 720 Query 725 SLGGISVDGFTLPEISTQEFTTPALTISPIGVGALSLPDITTQQFTTPELTIDPITLGGF 784 SLGGISVDGFTLPEISTQEFTTPALTISPIGVGALSLPDITTQQFTTPELTIDPITLGGF Sbjct 721 SLGGISVDGFTLPEISTQEFTTPALTISPIGVGALSLPDITTQQFTTPELTIDPITLGGF 780 Query 785 TLPQLSIPAITTPAFTIDPIALGGFTLPQIMTPEITTPPFAIDPIGLSGFTLPQVNIPEI 844 TLPQLSIPAITTPAFTIDPIALGGFTLPQIMTPEITTPPFAIDPIGLSGFTLPQVNIPEI Sbjct 781 TLPQLSIPAITTPAFTIDPIALGGFTLPQIMTPEITTPPFAIDPIGLSGFTLPQVNIPEI 840 Query 845 TTPEFTIQPVGLAAFTTPALTIASIHLPSTTMGGFAIPAGPGYFNSSATPSLGFFNAGIG 904 TTPEFTIQPVGLAAFTTPALTIASIHLPSTTMGGFAIPAGPGYFNSSATPSLGFFNAGIG Sbjct 841 TTPEFTIQPVGLAAFTTPALTIASIHLPSTTMGGFAIPAGPGYFNSSATPSLGFFNAGIG 900 Query 905 GNSGFGNSGSGLSGWFNTSPVGLLAGSGYQNYGGLISGFSNLGSGISGFANTGTLPFAVT 964 GNSGFGNSGSGLSGWFNTSPVGLLAGSGYQNYGGLISGFSNLGSGISGFANTGTLPFAVT Sbjct 901 GNSGFGNSGSGLSGWFNTSPVGLLAGSGYQNYGGLISGFSNLGSGISGFANTGTLPFAVT 960 Query 965 SLVSGLANIGNNLSGLFFQSTTP 987 SLVSGLANIGNNLSGLFFQSTTP Sbjct 961 SLVSGLANIGNNLSGLFFQSTTP 983 >gi|167970408|ref|ZP_02552685.1| PPE family protein [Mycobacterium tuberculosis H37Ra] Length=983 Score = 1820 bits (4714), Expect = 0.0, Method: Compositional matrix adjust. Identities = 981/983 (99%), Positives = 982/983 (99%), Gaps = 0/983 (0%) Query 5 VLPPEINSALIFAGAGSGPMLAAASAWDGLATELASAAVSFGSVTAGLVGGSWQGRSSVA 64 +LPPEINSALIFAGAGSGPMLAAASAWDGLATELASAAVSFGSVTAGLVGGSWQGRSSVA Sbjct 1 MLPPEINSALIFAGAGSGPMLAAASAWDGLATELASAAVSFGSVTAGLVGGSWQGRSSVA 60 Query 65 MAAAAAPYAGWLAAAATQAEQAATQAQVMVAEFEAVRLAMVQPALVAANRSGLISLVISN 124 MAAAAAPYAGWLAAAATQAEQAATQAQVMVAEFEAVRLAMVQPALVAANRSGLISLVISN Sbjct 61 MAAAAAPYAGWLAAAATQAEQAATQAQVMVAEFEAVRLAMVQPALVAANRSGLISLVISN 120 Query 125 LFGQNAPAIAAAEAAYEEMWALDVSAMAAYHSGASAVAVALPAFALPLRLPAGLAAGPAA 184 LFGQNAPAIAAAEAAYEEMWALDVSAMAAYHSGASAVAVALPAFALPLRLPAGLAAGPAA Sbjct 121 LFGQNAPAIAAAEAAYEEMWALDVSAMAAYHSGASAVAVALPAFALPLRLPAGLAAGPAA 180 Query 185 VVTALTTAVGMPTFAGRAIAASLGLANVGGGNLGNANNGLGNIGNANLGNNNLGSGNFGS 244 VVTALTTAVGMPTFAGRAIAASLGLANVGGGNLGNANNGLGNIGNANLGNNNLGSGNFGS Sbjct 181 VVTALTTAVGMPTFAGRAIAASLGLANVGGGNLGNANNGLGNIGNANLGNNNLGSGNFGS 240 Query 245 FNIGSANLGGNNIGIGNAGANNFGLANLGNLNTGFANAGIGNFGIANTGNNNIGNGLTGN 304 FNIGSANLGGNNIGIGNAGANNFGLANLGNLNTGFANAGIGNFGIANTGNNNIGNGLTGN Sbjct 241 FNIGSANLGGNNIGIGNAGANNFGLANLGNLNTGFANAGIGNFGIANTGNNNIGNGLTGN 300 Query 305 NQIGIGGLNSGNGNVGLFNAGSANIGFFNSGNGNFGIGNSGNFSTGLFNPGHGNTGFLNA 364 NQIGIGGLNSGNGNVGLFNAGSANIGFFNSGNGNFGIGNSGNFSTGLFNPGHGNTGFLNA Sbjct 301 NQIGIGGLNSGNGNVGLFNAGSANIGFFNSGNGNFGIGNSGNFSTGLFNPGHGNTGFLNA 360 Query 365 GSFNTGMFDVGNANTGSFNVGHYNFGAFNPGPSNTGTFNTGGANTGWFNTGSINTGAFNI 424 GSFNTGMFDVGNANTGSFNVGHYNFGAFNPGPSNTGTFNTGGANTGWFNTGSINTGAFNI Sbjct 361 GSFNTGMFDVGNANTGSFNVGHYNFGAFNPGPSNTGTFNTGGANTGWFNTGSINTGAFNI 420 Query 425 GDMNNGLFNTGDMNNGVFYRGVGQGSLQFAITSPDLTLPSLEIPGISVPAFSLPAITLPS 484 GDMNNGLFNTGDMNNGVFYRGVGQGSLQFAITSPDLTLPSLEIPGISVPAFSLPAITLPS Sbjct 421 GDMNNGLFNTGDMNNGVFYRGVGQGSLQFAITSPDLTLPSLEIPGISVPAFSLPAITLPS 480 Query 485 LTIPAVTTPANVTVGAFDLPGLTVPSLTIPAAMTPANITVGAFDLPGLTVPSLTIPATTT 544 LTIPAVTTPANVTVGAFDLPGLTVPSLTIPAAMTPANITVGAFDLPGLTVPSLTIPATTT Sbjct 481 LTIPAVTTPANVTVGAFDLPGLTVPSLTIPAAMTPANITVGAFDLPGLTVPSLTIPATTT 540 Query 545 PANITVGAFNLPQLSIPSVTVPPITIPAGTALGAFNLPTLSIPSVTVPPITIPAGTTVGG 604 PANITVGAFNLPQLSIPSVTVPPITIPAGTALGAFNLPTLSIPSVTVPPITIPAGTTVGG Sbjct 541 PANITVGAFNLPQLSIPSVTVPPITIPAGTALGAFNLPTLSIPSVTVPPITIPAGTTVGG 600 Query 605 FTLPTIHTPLISTPQISIGGFSTPGIATQANSGVINLPTFSLNGITITNLVVFIPNNITA 664 FTLPTIHTPLISTPQISIGGFSTPGIATQANSGVINLPTFSLNGITITNLVVFIPNNITA Sbjct 601 FTLPTIHTPLISTPQISIGGFSTPGIATQANSGVINLPTFSLNGITITNLVVFIPNNITA 660 Query 665 LQTNMPGVFPQIGGFANTPPAFINTGTITVGGGQINGVGFSIGAINVTPFTLPNVVIQPW 724 LQTNMPGVFPQIGGFANTPPAFINTGTITVGGGQINGVGFSIGAINVTPFTLPNVVIQPW Sbjct 661 LQTNMPGVFPQIGGFANTPPAFINTGTITVGGGQINGVGFSIGAINVTPFTLPNVVIQPW 720 Query 725 SLGGISVDGFTLPEISTQEFTTPALTISPIGVGALSLPDITTQQFTTPELTIDPITLGGF 784 SLGGISVDGFTLPEISTQEFTTPALTISPIGVGALSLPDITTQQFTTPE TIDPITLGGF Sbjct 721 SLGGISVDGFTLPEISTQEFTTPALTISPIGVGALSLPDITTQQFTTPEWTIDPITLGGF 780 Query 785 TLPQLSIPAITTPAFTIDPIALGGFTLPQIMTPEITTPPFAIDPIGLSGFTLPQVNIPEI 844 TLPQLSIPAITTPAFTIDPIALGGFTLPQIMTPEITTPPFAIDPIGLSGFTLPQVNIPEI Sbjct 781 TLPQLSIPAITTPAFTIDPIALGGFTLPQIMTPEITTPPFAIDPIGLSGFTLPQVNIPEI 840 Query 845 TTPEFTIQPVGLAAFTTPALTIASIHLPSTTMGGFAIPAGPGYFNSSATPSLGFFNAGIG 904 TTPEFTIQPVGLAAFTTPALTIASIHLPSTTMGGFAIPAGPGYFNSSATPSLGFFNAGIG Sbjct 841 TTPEFTIQPVGLAAFTTPALTIASIHLPSTTMGGFAIPAGPGYFNSSATPSLGFFNAGIG 900 Query 905 GNSGFGNSGSGLSGWFNTSPVGLLAGSGYQNYGGLISGFSNLGSGISGFANTGTLPFAVT 964 GNSGFGNSGSGLSGWFNTSPVGLLAGSGYQNYGGLISGFSNLGSGISGFANTGTLPFAVT Sbjct 901 GNSGFGNSGSGLSGWFNTSPVGLLAGSGYQNYGGLISGFSNLGSGISGFANTGTLPFAVT 960 Query 965 SLVSGLANIGNNLSGLFFQSTTP 987 SLVSGLANIGNNLSGLFFQSTTP Sbjct 961 SLVSGLANIGNNLSGLFFQSTTP 983 >gi|340626928|ref|YP_004745380.1| PPE family protein [Mycobacterium canettii CIPT 140010059] gi|340005118|emb|CCC44267.1| PPE family protein [Mycobacterium canettii CIPT 140010059] Length=987 Score = 1585 bits (4105), Expect = 0.0, Method: Compositional matrix adjust. Identities = 962/987 (98%), Positives = 972/987 (99%), Gaps = 0/987 (0%) Query 1 MHYSVLPPEINSALIFAGAGSGPMLAAASAWDGLATELASAAVSFGSVTAGLVGGSWQGR 60 MHYSVLPPE+NSALIFAGAGSGPMLAAASAWDGLATELASAA SFGSVTAGLVGGSWQGR Sbjct 1 MHYSVLPPEVNSALIFAGAGSGPMLAAASAWDGLATELASAAASFGSVTAGLVGGSWQGR 60 Query 61 SSVAMAAAAAPYAGWLAAAATQAEQAATQAQVMVAEFEAVRLAMVQPALVAANRSGLISL 120 SSVAMAAAAAPYAGWLAAAATQAEQAA QAQV+V EFEA RL MVQPALVAANRS L+SL Sbjct 61 SSVAMAAAAAPYAGWLAAAATQAEQAAAQAQVIVTEFEAARLTMVQPALVAANRSSLVSL 120 Query 121 VISNLFGQNAPAIAAAEAAYEEMWALDVSAMAAYHSGASAVAVALPAFALPLRLPAGLAA 180 V++NLFGQNAPAIAAAEAAYEEMWALDVSAMA YHSGASAVA ALPAFALPLRLPAGLAA Sbjct 121 VMANLFGQNAPAIAAAEAAYEEMWALDVSAMATYHSGASAVAAALPAFALPLRLPAGLAA 180 Query 181 GPAAVVTALTTAVGMPTFAGRAIAASLGLANVGGGNLGNANNGLGNIGNANLGNNNLGSG 240 GPAAVVTALTTA G+PTFAGRAIAA+LGLANVGGGNLGNAN GL NIGNANLGNNNLGSG Sbjct 181 GPAAVVTALTTAAGIPTFAGRAIAANLGLANVGGGNLGNANIGLRNIGNANLGNNNLGSG 240 Query 241 NFGSFNIGSANLGGNNIGIGNAGANNFGLANLGNLNTGFANAGIGNFGIANTGNNNIGNG 300 NFGSFNIGSANLGGNNIGIGNAGA+NFGLANLGNLNTGFANAGIGNFGIANTGNNNIG G Sbjct 241 NFGSFNIGSANLGGNNIGIGNAGASNFGLANLGNLNTGFANAGIGNFGIANTGNNNIGIG 300 Query 301 LTGNNQIGIGGLNSGNGNVGLFNAGSANIGFFNSGNGNFGIGNSGNFSTGLFNPGHGNTG 360 LTGNNQIGIGGLNSGNGNVGLFN+GSANIGFFNSGNGNFGIGNSGNFSTGLFNPGHGNTG Sbjct 301 LTGNNQIGIGGLNSGNGNVGLFNSGSANIGFFNSGNGNFGIGNSGNFSTGLFNPGHGNTG 360 Query 361 FLNAGSFNTGMFDVGNANTGSFNVGHYNFGAFNPGPSNTGTFNTGGANTGWFNTGSINTG 420 FLNAGSFNTGMFDVGNANTGSFN GHYNFGAFNPGPSNTGTFNTGGANTGWFNTGSINTG Sbjct 361 FLNAGSFNTGMFDVGNANTGSFNAGHYNFGAFNPGPSNTGTFNTGGANTGWFNTGSINTG 420 Query 421 AFNIGDMNNGLFNTGDMNNGVFYRGVGQGSLQFAITSPDLTLPSLEIPGISVPAFSLPAI 480 AFNIGDMNNGLFNTGDMNNGVFYRGVGQGSLQFAITSPDLTLPSLEIPGISVPAFSLPAI Sbjct 421 AFNIGDMNNGLFNTGDMNNGVFYRGVGQGSLQFAITSPDLTLPSLEIPGISVPAFSLPAI 480 Query 481 TLPSLTIPAVTTPANVTVGAFDLPGLTVPSLTIPAAMTPANITVGAFDLPGLTVPSLTIP 540 TLPSLTIPAVTTPANVTVGAFDLPGLTVPSLTIPAAMTPANITVGAFDLPGLTVPSLTIP Sbjct 481 TLPSLTIPAVTTPANVTVGAFDLPGLTVPSLTIPAAMTPANITVGAFDLPGLTVPSLTIP 540 Query 541 ATTTPANITVGAFNLPQLSIPSVTVPPITIPAGTALGAFNLPTLSIPSVTVPPITIPAGT 600 ATTTPANITVGAFNLPQLSIPSVTVPPITIPAGTALGAFNLPTLSIPSVTVPPITIPAGT Sbjct 541 ATTTPANITVGAFNLPQLSIPSVTVPPITIPAGTALGAFNLPTLSIPSVTVPPITIPAGT 600 Query 601 TVGGFTLPTIHTPLISTPQISIGGFSTPGIATQANSGVINLPTFSLNGITITNLVVFIPN 660 TVGGFTLPTIHTPLISTPQISIGGFSTPGIATQANSGVINLPTFSLNGITITNLVVFIPN Sbjct 601 TVGGFTLPTIHTPLISTPQISIGGFSTPGIATQANSGVINLPTFSLNGITITNLVVFIPN 660 Query 661 NITALQTNMPGVFPQIGGFANTPPAFINTGTITVGGGQINGVGFSIGAINVTPFTLPNVV 720 NITALQTNMPGVFPQIGGF NTPPAFINTGTITVGGGQINGVGFSIGAINVTPFTLPNVV Sbjct 661 NITALQTNMPGVFPQIGGFPNTPPAFINTGTITVGGGQINGVGFSIGAINVTPFTLPNVV 720 Query 721 IQPWSLGGISVDGFTLPEISTQEFTTPALTISPIGVGALSLPDITTQQFTTPELTIDPIT 780 IQPWSLGGISVDGFTLPEISTQEFTTPALTISPIGVGALSLPDITTQQFTTPELTIDPIT Sbjct 721 IQPWSLGGISVDGFTLPEISTQEFTTPALTISPIGVGALSLPDITTQQFTTPELTIDPIT 780 Query 781 LGGFTLPQLSIPAITTPAFTIDPIALGGFTLPQIMTPEITTPPFAIDPIGLSGFTLPQVN 840 LGGFTLPQLSIPAITTPAFTIDPIALGGFTLPQIMTPEITTPPFAIDPIGLSGFTLPQVN Sbjct 781 LGGFTLPQLSIPAITTPAFTIDPIALGGFTLPQIMTPEITTPPFAIDPIGLSGFTLPQVN 840 Query 841 IPEITTPEFTIQPVGLAAFTTPALTIASIHLPSTTMGGFAIPAGPGYFNSSATPSLGFFN 900 IPEITTPEFTIQPVGLAAFTTPALTIASIHLPSTTMGGFAIPAGPGYFNSSATPS GFFN Sbjct 841 IPEITTPEFTIQPVGLAAFTTPALTIASIHLPSTTMGGFAIPAGPGYFNSSATPSSGFFN 900 Query 901 AGIGGNSGFGNSGSGLSGWFNTSPVGLLAGSGYQNYGGLISGFSNLGSGISGFANTGTLP 960 AGIGGNSGFGNSGSGLSGWFNTSPVGLLAGSGYQNYGGLISGFSN+GSGISGFANTGTLP Sbjct 901 AGIGGNSGFGNSGSGLSGWFNTSPVGLLAGSGYQNYGGLISGFSNVGSGISGFANTGTLP 960 Query 961 FAVTSLVSGLANIGNNLSGLFFQSTTP 987 FAVTSLVSGLANIGNNLSGLFFQSTTP Sbjct 961 FAVTSLVSGLANIGNNLSGLFFQSTTP 987 >gi|254364737|ref|ZP_04980783.1| PPE family protein [Mycobacterium tuberculosis str. Haarlem] gi|134150251|gb|EBA42296.1| PPE family protein [Mycobacterium tuberculosis str. Haarlem] Length=987 Score = 1500 bits (3884), Expect = 0.0, Method: Compositional matrix adjust. Identities = 941/987 (96%), Positives = 948/987 (97%), Gaps = 26/987 (2%) Query 1 MHYSVLPPEINSALIFAGAGSGPMLAAASAWDGLATELASAAVSFGSVTAGLVGGSWQGR 60 MHYSVLPPEINSALIFAGAGSGPMLAAASAWDGLATELASAAVSFGSVTAGLVGGSWQGR Sbjct 27 MHYSVLPPEINSALIFAGAGSGPMLAAASAWDGLATELASAAVSFGSVTAGLVGGSWQGR 86 Query 61 SSVAMAAAAAPYAGWLAAAATQAEQAATQAQVMVAEFEAVRLAMVQPALVAANRSGLISL 120 SSVAMAAAAAPYAGWLAAAATQAEQAATQAQVMVAEFEAVRLAMVQPALVAANRSGLISL Sbjct 87 SSVAMAAAAAPYAGWLAAAATQAEQAATQAQVMVAEFEAVRLAMVQPALVAANRSGLISL 146 Query 121 VISNLFGQNAPAIAAAEAAYEEMWALDVSAMAAYHSGASAVAVALPAFALPLRLPAGLAA 180 VISNLFGQNAPAIAAAEAAYEEMWALDVSAMAAYHSGASAVAVALPAFALPLRLPAGLAA Sbjct 147 VISNLFGQNAPAIAAAEAAYEEMWALDVSAMAAYHSGASAVAVALPAFALPLRLPAGLAA 206 Query 181 GPAAVVTALTTAVGMPTFAGRAIAASLGLANVGGGNLGNANNGLGNIGNANLGNNNLGSG 240 GPAAVVTALTTAVGMPTFAGRAIAASLGLANVGGGNLGNANNGLGNIGNANLGNNNLGSG Sbjct 207 GPAAVVTALTTAVGMPTFAGRAIAASLGLANVGGGNLGNANNGLGNIGNANLGNNNLGSG 266 Query 241 NFGSFNIGSANLGGNNIGIGNAGANNFGLANLGNLNTGFANAGIGNFGIANTGNNNIGNG 300 NFGSFNIGSANLGGNNIGIGNAGANNFGLANLGNLNTGFANAGIGNFGIANTGNNNIGNG Sbjct 267 NFGSFNIGSANLGGNNIGIGNAGANNFGLANLGNLNTGFANAGIGNFGIANTGNNNIGNG 326 Query 301 LTGNNQIGIGGLNSGNGNVGLFNAGSANIGFFNSGNGNFGIGNSGNFSTGLFNPGHGNTG 360 LTGNNQIGIGGLNSGNGNVGLFNAGSANIGFFNSGNGNFGIGNSGNFSTGLFNPGHGNTG Sbjct 327 LTGNNQIGIGGLNSGNGNVGLFNAGSANIGFFNSGNGNFGIGNSGNFSTGLFNPGHGNTG 386 Query 361 FLNAGSFNTGMFDVGNANTGSFNVGHYNFGAFNPGPSNTGTFNTGGANTGWFNTGSINTG 420 FLNAGSFNTGMFDVGNANTGSFNVGHYNFGAFNPGPSNTGTFNTGGANTGWFNTGSINTG Sbjct 387 FLNAGSFNTGMFDVGNANTGSFNVGHYNFGAFNPGPSNTGTFNTGGANTGWFNTGSINTG 446 Query 421 AFNIGDMNNGLFNTGDMNNGVFYRGVGQGSLQFAITSPDLTLPSLEIPGISVPAFSLPAI 480 AFNIGDMNNGLFNTGDMNNGVFYRGVGQGSLQFAITSPDLTLPSLEIPGISVPAFSLPAI Sbjct 447 AFNIGDMNNGLFNTGDMNNGVFYRGVGQGSLQFAITSPDLTLPSLEIPGISVPAFSLPAI 506 Query 481 TLPSLTIPAVTTPANVTVGAFDLPGLTVPSLTIPAAMTPANITVGAFDLPGLTVPSLTIP 540 TLPSLTIPAVTTPANVTVGAFDLPGLTVPSLTIPA TPANITVGAF+LP L++PS+T+P Sbjct 507 TLPSLTIPAVTTPANVTVGAFDLPGLTVPSLTIPATTTPANITVGAFNLPQLSIPSVTVP 566 Query 541 ATTTPANITVGAFNLPQLSIPSVTVPPITIPAGTALGAFNLPTLSIPSVTVPPITIPAGT 600 T PA +GAFNLP LSIPSVTVPPITIPAGT +G F LP Sbjct 567 PITIPAGTALGAFNLPTLSIPSVTVPPITIPAGTTVGGFTLP------------------ 608 Query 601 TVGGFTLPTIHTPLISTPQISIGGFSTPGIATQANSGVINLPTFSLNGITITNLVVFIPN 660 TIHTPLISTPQISIGGFSTPGIATQANSGVINLPTFSLNGITITNLVVFIPN Sbjct 609 --------TIHTPLISTPQISIGGFSTPGIATQANSGVINLPTFSLNGITITNLVVFIPN 660 Query 661 NITALQTNMPGVFPQIGGFANTPPAFINTGTITVGGGQINGVGFSIGAINVTPFTLPNVV 720 NITALQTNMPGVFPQIGGFANTPPAFINTGTITVGGGQINGVGFSIGAINVTPFTLPNVV Sbjct 661 NITALQTNMPGVFPQIGGFANTPPAFINTGTITVGGGQINGVGFSIGAINVTPFTLPNVV 720 Query 721 IQPWSLGGISVDGFTLPEISTQEFTTPALTISPIGVGALSLPDITTQQFTTPELTIDPIT 780 IQPWSLGGISVDGFTLPEISTQEFTTPALTISPIGVGALSLPDITTQQFTTPELTIDPIT Sbjct 721 IQPWSLGGISVDGFTLPEISTQEFTTPALTISPIGVGALSLPDITTQQFTTPELTIDPIT 780 Query 781 LGGFTLPQLSIPAITTPAFTIDPIALGGFTLPQIMTPEITTPPFAIDPIGLSGFTLPQVN 840 LGGFTLPQLSIPAITTPAFTIDPIALGGFTLPQIMTPEITTPPFAIDPIGLSGFTLPQVN Sbjct 781 LGGFTLPQLSIPAITTPAFTIDPIALGGFTLPQIMTPEITTPPFAIDPIGLSGFTLPQVN 840 Query 841 IPEITTPEFTIQPVGLAAFTTPALTIASIHLPSTTMGGFAIPAGPGYFNSSATPSLGFFN 900 IPEITTPEFTIQPVGLAAFTTPALTIASIHLPSTTMGGFAIPAGPGYFNSSATPSLGFFN Sbjct 841 IPEITTPEFTIQPVGLAAFTTPALTIASIHLPSTTMGGFAIPAGPGYFNSSATPSLGFFN 900 Query 901 AGIGGNSGFGNSGSGLSGWFNTSPVGLLAGSGYQNYGGLISGFSNLGSGISGFANTGTLP 960 AGIGGNSGFGNSGSGLSGWFNTSPVGLLAGSGYQNYGGLISGFSNLGSGISGFANTGTLP Sbjct 901 AGIGGNSGFGNSGSGLSGWFNTSPVGLLAGSGYQNYGGLISGFSNLGSGISGFANTGTLP 960 Query 961 FAVTSLVSGLANIGNNLSGLFFQSTTP 987 FAVTSLVSGLANIGNNLSGLFFQSTTP Sbjct 961 FAVTSLVSGLANIGNNLSGLFFQSTTP 987 >gi|148822960|ref|YP_001287714.1| PPE family protein [Mycobacterium tuberculosis F11] gi|297634310|ref|ZP_06952090.1| PPE family protein [Mycobacterium tuberculosis KZN 4207] gi|297731297|ref|ZP_06960415.1| PPE family protein [Mycobacterium tuberculosis KZN R506] gi|313658629|ref|ZP_07815509.1| PPE family protein [Mycobacterium tuberculosis KZN V2475] gi|148721487|gb|ABR06112.1| PPE family protein [Mycobacterium tuberculosis F11] Length=975 Score = 1009 bits (2609), Expect = 0.0, Method: Compositional matrix adjust. Identities = 687/1013 (68%), Positives = 773/1013 (77%), Gaps = 66/1013 (6%) Query 1 MHYSVLPPEINSALIFAGAGSGPMLAAASAWDGLATELASAAVSFGSVTAGLVGGSWQGR 60 M++SVLPPEINSALIFAGAG PM AAA+AWDGLA ELASAA SFGSVT+GLVGG+WQG Sbjct 1 MNFSVLPPEINSALIFAGAGPEPMAAAATAWDGLAMELASAAASFGSVTSGLVGGAWQGA 60 Query 61 SSVAMAAAAAPYAGWLAAAATQAEQAATQAQVMVAEFEAVRLAMVQPALVAANRSGLISL 120 SS AMAAAAAPYA WLAAAA QAEQ A QA M+AEFEAV+ A+VQP LVAANR+ L+SL Sbjct 61 SSSAMAAAAAPYAAWLAAAAVQAEQTAAQAAAMIAEFEAVKTAVVQPMLVAANRADLVSL 120 Query 121 VISNLFGQNAPAIAAAEAAYEEMWALDVSAMAAYHSGASAVAVALPAFALPLR----LPA 176 V+SNLFGQNAPAIAA EA YE+MWA DVSAM+AYH+GASA+A AL F+ PL+ LPA Sbjct 121 VMSNLFGQNAPAIAAIEATYEQMWAADVSAMSAYHAGASAIASALSPFSKPLQNLAGLPA 180 Query 177 GLAAGPAAVVTALTTAVGMPTFAGRAIAASLGLANVGGGNLGNANNGLGNIGNANLGNNN 236 LA+G A A+T A G+P AG A +LG+ANVGGGN+GNANNGL NIGNANLGN N Sbjct 181 WLASG--APAAAMTAAAGIPALAGGPTAINLGIANVGGGNVGNANNGLANIGNANLGNYN 238 Query 237 LGSGNFGSFNIGSANLGGNNIGIGNAGANNFGLANLGNLNTGFANAGIGNFGIANTGNNN 296 GSGNFG+ NIGSA+LG NNIG GN G+NN G+ NLGNLNTGFAN G+GNFG NTGNNN Sbjct 239 FGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLGNLNTGFANTGLGNFGFGNTGNNN 298 Query 297 IGNGLTGNNQIGIGGLNSGNGNVGLFNAGSANIGFFNSGNGNFGIGNSGNFSTGLFNPGH 356 IG GLTGNNQIGIGGLNSG GN GLFN+GS N+GFFNSGNGNFGIGNSGNF+TG +N GH Sbjct 299 IGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGNFGIGNSGNFNTGGWNSGH 358 Query 357 GNTGFLNAGSFNTGMFDVGNANTGSFNVGHYNFGAFNPGPSNTGTFNTGGANTGWFNTGS 416 GNTGF NAGSFNTGM DVGNANTGS N G YN G FNPG SNTGTFNTG ANTG+ N G+ Sbjct 359 GNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSNTGTFNTGNANTGFLNAGN 418 Query 417 INTGAFNIGDMNNGLFNTGDMNNGVFYRGVGQGSLQFAITSPDLTLPSLEIPGISVPAFS 476 INTG FNIG MNNGLFNTGDMNNGVFYRGVGQGSLQF+IT+PDLTLP L+IPGISVPAFS Sbjct 419 INTGVFNIGHMNNGLFNTGDMNNGVFYRGVGQGSLQFSITTPDLTLPPLQIPGISVPAFS 478 Query 477 LPAITLPSLTIPAVTTPANVTVGAFDLPGLTVPSLTIPAAMTPANITVGAFDLPGLTVPS 536 LPAITLPSLTIPA TTPAN+TVGAF LPGLT+PSL IPAA TPANITVGAF LPGLT+PS Sbjct 479 LPAITLPSLTIPAATTPANITVGAFSLPGLTLPSLNIPAATTPANITVGAFSLPGLTLPS 538 Query 537 LTIPATTTPANITVGAFNLPQLSIPSVTVPPITIPAGTALGAFNLPTLSIPSVTVPPITI 596 L IPA TTPANITV F LP LSIPSV +PP+T+P T +GAFNLP L IP VT+P +TI Sbjct 539 LNIPAATTPANITVSGFQLPPLSIPSVAIPPVTVPPIT-VGAFNLPPLQIPEVTIPQLTI 597 Query 597 PAGTTVGGFTLPTIHTPLISTPQISIGGFSTPGIATQA--NSGVINLPTFSLNGITITNL 654 PAG T+GGF+LP IHT I+ QI +G F P I ++ I +P F GI T Sbjct 598 PAGITIGGFSLPAIHTQPITVGQIGVGQFGLPSIGWDVFLSTPRITVPAF---GIPFT-- 652 Query 655 VVFIPNNITALQTNMPGVFPQIGGFANTPPAFINTGTITVGGGQINGVGFSIGAINVTPF 714 QTN+P + P GG + F+ GA+ F Sbjct 653 --------LQFQTNVPALQPPGGGLST----------------------FTNGALIFGEF 682 Query 715 TLPNVVIQPWSLGG---------------------ISVDGFTLPEISTQEFTTPALTISP 753 LP +V+ P++L G I+VDGFTLP+I+T TTP I P Sbjct 683 DLPQLVVHPYTLTGPIVIGSFFLPAFNIPGIDVPAINVDGFTLPQITTPAITTPEFAIPP 742 Query 754 IGVGALSLPDITTQQFTTPELTIDPITLGGFTLPQLSIPAITTPAFTIDPIALGGFTLPQ 813 IGVG +LP ITTQ+ TPELTI+ I +GGFTLPQ++ P ITTP TIDPI L GFTLPQ Sbjct 743 IGVGGFTLPQITTQEIITPELTINSIGVGGFTLPQITTPPITTPPLTIDPINLTGFTLPQ 802 Query 814 IMTPEITTPPFAIDPIGLSGFTLPQVNIPEITTPEFTIQPVGLAAFTTPALTIASIHLPS 873 I TP ITTPP IDPI L+GFTLPQ+ P ITTP TI+P+G+ FTTP LT+ IHLPS Sbjct 803 ITTPPITTPPLTIDPINLTGFTLPQITTPPITTPPLTIEPIGVGGFTTPPLTVPGIHLPS 862 Query 874 TTMGGFAIPAGPGYFNSSATPSLGFFNAGIGGNSGFGNSGSGLSGWFNTSPVGLLAGSGY 933 TT+G FAIP GPGYFNSS PS GFFN+G GGNSGFGN+GSGLSGWFNT+P GLL GSGY Sbjct 863 TTIGAFAIPGGPGYFNSSTAPSSGFFNSGAGGNSGFGNNGSGLSGWFNTNPAGLLGGSGY 922 Query 934 QNYGGLISGFSNLGSGISGFANTGTLPFAVTSLVSGLANIGNNLSGLFFQSTT 986 QN+GGL SGFSNLGSG+SGFAN G LPF+V S+VSG ANIG NL+G FFQ TT Sbjct 923 QNFGGLSSGFSNLGSGVSGFANRGILPFSVASVVSGFANIGTNLAG-FFQGTT 974 >gi|183982826|ref|YP_001851117.1| PPE family protein [Mycobacterium marinum M] gi|183176152|gb|ACC41262.1| PPE family protein [Mycobacterium marinum M] Length=1021 Score = 999 bits (2584), Expect = 0.0, Method: Compositional matrix adjust. Identities = 648/1040 (63%), Positives = 762/1040 (74%), Gaps = 72/1040 (6%) Query 1 MHYSVLPPEINSALIFAGAGSGPMLAAASAWDGLATELASAAVSFGSVTAGLVGGSWQGR 60 M++SVLPPEINSALIFAGAGS PML AA+AWDGLA EL+ AA+SF S+T+G++GGSWQG Sbjct 1 MNFSVLPPEINSALIFAGAGSEPMLTAAAAWDGLADELSMAALSFESITSGILGGSWQGA 60 Query 61 SSVAMAAAAAPYAGWLAAAATQAEQAATQAQVMVAEFEAVRLAMVQPALVAANRSGLISL 120 +S+AMA AAAPYAGWLA AA QA QA QA VM AEFEAVR AMV PALVAANRS L+SL Sbjct 61 ASLAMAGAAAPYAGWLATAAGQAAQAGAQASVMAAEFEAVRTAMVPPALVAANRSNLVSL 120 Query 121 VISNLFGQNAPAIAAAEAAYEEMWALDVSAMAAYHSGASAVAVALPAFALPLRLPAGLAA 180 V+SNLFGQNAPAIA EAAYEE+WALDVS M+AYHSGASAV AL FA PL+ AGL + Sbjct 121 VLSNLFGQNAPAIATVEAAYEEIWALDVSVMSAYHSGASAVVTALTPFA-PLQSLAGLQS 179 Query 181 G-PAAVVTALTTAVGMPTFAGRAIAASLGLANVGGGNLGNANNGLGNIGNANLGNNNLGS 239 G A+ + A P R +LGLANVGGGN+GN NNG GN G+ NLG+ N GS Sbjct 180 GLSTAMSGGASVAAAAPAVPDRVTTLNLGLANVGGGNVGNGNNGFGNFGSGNLGSGNFGS 239 Query 240 GNFGSFNIGSANLGGNNIGIGNAGANNFGLANLGNLNTGFANAGIGNFGIANTGNNNIGN 299 GNFGS NIG++NLG +NNFG NLG+ N GFAN G GNFG N GNNNIG Sbjct 240 GNFGSSNIGASNLG----------SNNFGFGNLGSFNNGFANIGAGNFGFGNNGNNNIGI 289 Query 300 GLTGNNQIGIGGLNSGNGNVGLFNAGSANIGFFNSGNGNFGIGNSGNFSTGLFNPGHGNT 359 GL GNNQ+GIG LNSG GNVGLFN+G NIGFFNSG+GNFGIGN+GNF TG+FN G+G+T Sbjct 290 GLNGNNQVGIGLLNSGTGNVGLFNSGDGNIGFFNSGSGNFGIGNTGNFGTGIFNSGNGST 349 Query 360 GFLNAGSFNTGMFDVGNANTGSFNVGHYNFGAFNPGPSNTGTFNTGGANTGWFNTGSINT 419 G NAGSFNTG+ +VG+ NTG N G YN G FNPG SNTG+FN GGANTGW N GSINT Sbjct 350 GLFNAGSFNTGVLNVGDGNTGILNTGSYNMGGFNPGSSNTGSFNIGGANTGWLNAGSINT 409 Query 420 GAFNIGDMNNGLFNTGDMNNGVFYRGVGQGSLQFAITSPDLTLPSLEIPGISVPAFSLPA 479 G N GDMNNGLFNTGDMNNG+F+RGVGQG L F I P+LTLP L++PGI+VP F+LPA Sbjct 410 GILNSGDMNNGLFNTGDMNNGIFFRGVGQGRLYFGIGLPELTLPPLDVPGITVPGFNLPA 469 Query 480 ITLPSLTIPAVTTPANVTVGAFDLPGLTVPSLTIPAAMTPANITVGAFDLPGLTVPSLTI 539 +TLPS+++PA+TTPAN+TVGAFDLPGLT+P LTIPAA TPANITVGAFDLPGLT+P LTI Sbjct 470 LTLPSMSLPAITTPANITVGAFDLPGLTLPPLTIPAATTPANITVGAFDLPGLTLPPLTI 529 Query 540 PATTTPANITVGAFNLPQLSIPSVTVPPITIPAGTALGAFNLPTLSIPSVTVPPITIPAG 599 PA TTPANITVGAF+LP L++P +T+P T PA +GAF+LP L++P +T+P T PA Sbjct 530 PAATTPANITVGAFDLPGLTLPPLTIPAATTPANITVGAFDLPGLTLPPLTIPAATTPAN 589 Query 600 TTVGGFTLPTIHTPLISTPQIS------IGGFSTPGIATQA------NSG---------- 637 TVG F LP + P ++ P IS IG F PGI TQ+ +G Sbjct 590 ITVGAFNLPGLAIPSLTIPSISIPAGTAIGSFDLPGITTQSIFVNNITTGSFTTPTIVTP 649 Query 638 -----VINLPTFSLNGITITNLVVFIPNNITALQTNMPGVFPQIGGFANTPPAFINTGTI 692 V+ +P F L + IPNNI ALQT + G +P IG F A++ TGT+ Sbjct 650 TIAGPVVTIPGFHL------DFKALIPNNIIALQTGIAGQYPAIGNFYGMEGAYLETGTL 703 Query 693 TVGGGQINGVGFSIGAINVTPFTLPNVVI-------------------------QPWSLG 727 T+ G I GF+I I+++ F+LPN I P S+ Sbjct 704 TL--GPIGLSGFTISPISISGFSLPNFTIPGINVPPIHLADFTLPAITTPEFTTPPLSID 761 Query 728 GISVDGFTLPEISTQEFTTPALTISPIGVGALSLPDITTQQFTTPELTIDPITLGGFTLP 787 I++DGFTLP+IST + TT TI PI VG +LP I+T Q TT TIDPI +GGFTLP Sbjct 762 PIALDGFTLPQISTPQITTEPFTIDPIAVGGFTLPQISTPQITTEPFTIDPIAVGGFTLP 821 Query 788 QLSIPAITTPAFTIDPIALGGFTLPQIMTPEITTPPFAIDPIGLSGFTLPQVNIPEITTP 847 Q+S P ITT FTIDPIA+GGFTLPQI TP+ITT PF IDPI + GFTLPQ+NIP TT Sbjct 822 QISTPQITTEPFTIDPIAVGGFTLPQISTPQITTEPFTIDPIAVGGFTLPQINIPPTTTG 881 Query 848 EFTIQPVGLAAFTTPALTIASIHLPSTTMGGFAIPAGPGYFNSSATPSLGFFNAGIGGNS 907 E TI P+GLA+FTTPALTI SIH+P+ T+ +IPAG G+ NSS PS GFFNAG GG+S Sbjct 882 ELTIPPIGLASFTTPALTIPSIHVPAGTLAQVSIPAGSGFLNSSTAPSSGFFNAGAGGSS 941 Query 908 GFGNSGSGLSGWFNTSPVGLLAGSGYQNYGGLISGFSNLGSGISGFANTGTLPFAVTSLV 967 GFGN+GSGLSGWFNT+ GL+ GSGYQNYG + SGFSNLG+G+SGFANTGTLP A+TSLV Sbjct 942 GFGNNGSGLSGWFNTNATGLIGGSGYQNYGSVFSGFSNLGTGVSGFANTGTLPLAMTSLV 1001 Query 968 SGLANIGNNLSGLFFQSTTP 987 SG AN+G++LSGLFFQS TP Sbjct 1002 SGFANVGSSLSGLFFQSVTP 1021 >gi|254550768|ref|ZP_05141215.1| PPE family protein [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|344219575|gb|AEN00206.1| PPE family protein [Mycobacterium tuberculosis CTRI-2] Length=1000 Score = 999 bits (2583), Expect = 0.0, Method: Compositional matrix adjust. Identities = 689/1038 (67%), Positives = 773/1038 (75%), Gaps = 91/1038 (8%) Query 1 MHYSVLPPEINSALIFAGAGSGPMLAAASAWDGLATELASAAVSFGSVTAGLVGGSWQGR 60 M++SVLPPEINSALIFAGAG PM AAA+AWDGLA ELASAA SFGSVT+GLVGG+WQG Sbjct 1 MNFSVLPPEINSALIFAGAGPEPMAAAATAWDGLAMELASAAASFGSVTSGLVGGAWQGA 60 Query 61 SSVAMAAAAAPYAGWLAAAATQAEQAATQAQVMVAEFEAVRLAMVQPALVAANRSGLISL 120 SS AMAAAAAPYA WLAAAA QAEQ A QA M+AEFEAV+ A+VQP LVAANR+ L+SL Sbjct 61 SSSAMAAAAAPYAAWLAAAAVQAEQTAAQAAAMIAEFEAVKTAVVQPMLVAANRADLVSL 120 Query 121 VISNLFGQNAPAIAAAEAAYEEMWALDVSAMAAYHSGASAVAVALPAFALPLR----LPA 176 V+SNLFGQNAPAIAA EA YE+MWA DVSAM+AYH+GASA+A AL F+ PL+ LPA Sbjct 121 VMSNLFGQNAPAIAAIEATYEQMWAADVSAMSAYHAGASAIASALSPFSKPLQNLAGLPA 180 Query 177 GLAAGPAAVVTALTTAVGMPTFAGRAIAASLGLANVGGGNLGNANNGLGNIGNANLGNNN 236 LA+G A A+T A G+P AG A +LG+ANVGGGN+GNANNGL NIGNANLGN N Sbjct 181 WLASG--APAAAMTAAAGIPALAGGPTAINLGIANVGGGNVGNANNGLANIGNANLGNYN 238 Query 237 LGSGNFGSFNIGSANLGGNNIGIGNAGANNFGLANLGNLNTGFANAGIGNFGIANTGNNN 296 GSGNFG+ NIGSA+LG NNIG GN G+NN G+ NLGNLNTGFAN G+GNFG NTGNNN Sbjct 239 FGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLGNLNTGFANTGLGNFGFGNTGNNN 298 Query 297 IGNGLTGNNQIGIGGLNSGNGNVGLFNAGSANIGFFNSGNGNFGIGNSGNFSTGLFNPGH 356 IG GLTGNNQIGIGGLNSG GN GLFN+GS N+GFFNSGNGNFGIGNSGNF+TG +N GH Sbjct 299 IGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGNFGIGNSGNFNTGGWNSGH 358 Query 357 GNTGFLNAGSFNTGMFDVGNANTGSFNVGHYNFGAFNPGPSNTGTFNTGGANTGWFNTGS 416 GNTGF NAGSFNTGM DVGNANTGS N G YN G FNPG SNTGTFNTG ANTG+ N G+ Sbjct 359 GNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSNTGTFNTGNANTGFLNAGN 418 Query 417 INTGAFNIGDMNNGLFNTGDMNNGVFYRGVGQGSLQFAITSPDLTLPSLEIPGISVPAFS 476 INTG FNIG MNNGLFNTGDMNNGVFYRGVGQGSLQF+IT+PDLTLP L+IPGISVPAFS Sbjct 419 INTGVFNIGHMNNGLFNTGDMNNGVFYRGVGQGSLQFSITTPDLTLPPLQIPGISVPAFS 478 Query 477 LPAITLPSLTIPAVTTPANVTVGAFDLPGLTVPSLTIPAAMTPANITVGAFDLPGLTVPS 536 LPAITLPSLTIPA TTPAN+TVGAF LPGLT+PSL IPAA TPANITVGAF LPGLT+PS Sbjct 479 LPAITLPSLTIPAATTPANITVGAFSLPGLTLPSLNIPAATTPANITVGAFSLPGLTLPS 538 Query 537 LTIPATTTPANITVGAFNLPQLSIPSVTVPPITIPAGTALGAFNLPTLSIPSVTVPPITI 596 L IPA TTPANITV F LP LSIPSV +PP+T+P T +GAFNLP L IP VT+P +TI Sbjct 539 LNIPAATTPANITVSGFQLPPLSIPSVAIPPVTVPPIT-VGAFNLPPLQIPEVTIPQLTI 597 Query 597 PAGTTVGGFTLPTIHTPLISTPQISIGGFSTPGIATQA--NSGVINLPTFSLNGITITNL 654 PAG T+GGF+LP IHT I+ QI +G F P I ++ I +P F GI T Sbjct 598 PAGITIGGFSLPAIHTQPITVGQIGVGQFGLPSIGWDVFLSTPRITVPAF---GIPFT-- 652 Query 655 VVFIPNNITALQTNMPGVFPQIGGFANTPPAFINTGTITVGGGQINGVGFSIGAINVTPF 714 QTN+P + P GG + F+ GA+ F Sbjct 653 --------LQFQTNVPALQPPGGGLST----------------------FTNGALIFGEF 682 Query 715 TLPNVVIQPWSLGG---------------------ISVDGFTLPEISTQEFTTPALTISP 753 LP +V+ P++L G I+VDGFTLP+I+T TTP I P Sbjct 683 DLPQLVVHPYTLTGPIVIGSFFLPAFNIPGIDVPAINVDGFTLPQITTPAITTPEFAIPP 742 Query 754 IGVGALSLPDITTQQFTTPELTI-------------------------DPITLGGFTLPQ 788 IGVG +LP ITTQ+ TPELTI DPI L GFTLPQ Sbjct 743 IGVGGFTLPQITTQEIITPELTINSIGVGGFTLPQITTPPITTPPLTIDPINLTGFTLPQ 802 Query 789 LSIPAITTPAFTIDPIALGGFTLPQIMTPEITTPPFAIDPIGLSGFTLPQVNIPEITTPE 848 ++ P ITTP TIDPI L GFTLPQI TP ITTPP IDPI L+GFTLPQ+ P ITTP Sbjct 803 ITTPPITTPPLTIDPINLTGFTLPQITTPPITTPPLTIDPINLTGFTLPQITTPPITTPP 862 Query 849 FTIQPVGLAAFTTPALTIASIHLPSTTMGGFAIPAGPGYFNSSATPSLGFFNAGIGGNSG 908 TI+P+G+ FTTP LT+ IHLPSTT+G FAIP GPGYFNSS PS GFFN+G GGNSG Sbjct 863 LTIEPIGVGGFTTPPLTVPGIHLPSTTIGAFAIPGGPGYFNSSTAPSSGFFNSGAGGNSG 922 Query 909 FGNSGSGLSGWFNTSPVGLLAGSGYQNYGGLISGFSNLGSGISGFANTGTLPFAVTSLVS 968 FGN+GSGLSGWFNT+P GLL GSGYQN+GGL SGFSNLGSG+SGFAN G LPF+V S+VS Sbjct 923 FGNNGSGLSGWFNTNPAGLLGGSGYQNFGGLSSGFSNLGSGVSGFANRGILPFSVASVVS 982 Query 969 GLANIGNNLSGLFFQSTT 986 G ANIG NL+G FFQ TT Sbjct 983 GFANIGTNLAG-FFQGTT 999 >gi|121637661|ref|YP_977884.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224990136|ref|YP_002644823.1| PPE family protein [Mycobacterium bovis BCG str. Tokyo 172] gi|121493308|emb|CAL71779.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224773249|dbj|BAH26055.1| PPE family protein [Mycobacterium bovis BCG str. Tokyo 172] Length=1026 Score = 988 bits (2553), Expect = 0.0, Method: Compositional matrix adjust. Identities = 691/1064 (65%), Positives = 775/1064 (73%), Gaps = 117/1064 (10%) Query 1 MHYSVLPPEINSALIFAGAGSGPMLAAASAWDGLATELASAAVSFGSVTAGLVGGSWQGR 60 M++SVLPPEINSALIFAGAG PM AAA+AWDGLA ELASAA SFGSVT+GLVGG+WQG Sbjct 1 MNFSVLPPEINSALIFAGAGPEPMAAAATAWDGLAMELASAAASFGSVTSGLVGGAWQGA 60 Query 61 SSVAMAAAAAPYAGWLAAAATQAEQAATQAQVMVAEFEAVRLAMVQPALVAANRSGLISL 120 SS AMAAAAAPYA WLAAAA QAEQ A QA M+AEFEAV+ A+VQP LVAANR+ L+SL Sbjct 61 SSSAMAAAAAPYAAWLAAAAVQAEQTAAQAAAMIAEFEAVKTAVVQPMLVAANRADLVSL 120 Query 121 VISNLFGQNAPAIAAAEAAYEEMWALDVSAMAAYHSGASAVAVALPAFALPLR----LPA 176 V+SNLFGQNAPAIAA EA YE+MWA DVSAM+AYH+GASA+A AL F+ PL+ LPA Sbjct 121 VMSNLFGQNAPAIAAIEATYEQMWAADVSAMSAYHAGASAIASALSPFSKPLQNLAGLPA 180 Query 177 GLAAGPAAVVTALTTAVGMPTFAGRAIAASLGLANVGGGNLGNANNGLGNIGNANLGNNN 236 LA+G A A+T A G+P AG A +LG+ANVGGGN+GNANNGL NIGNANLGN N Sbjct 181 WLASG--APAAAMTAAAGIPALAGGPTAINLGIANVGGGNVGNANNGLANIGNANLGNYN 238 Query 237 LGSGNFGSFNIGSANLGGNNIGIGNAGANNFGLANLGNLNTGFANAGIGNFGIANTGNNN 296 GSGNFG+ NIGSA+LG NNIG GN G+NN G+ NLGNLNTGFAN G+GNFG NTGNNN Sbjct 239 FGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLGNLNTGFANTGLGNFGFGNTGNNN 298 Query 297 IGNGLTGNNQIGIGGLNSGNGNVGLFNAGSANIGFFNSGNGNFGIGNSGNFSTGLFNPGH 356 IG GLTGNNQIGIGGLNSG GN GLFN+GS N+GFFNSGNGNFGIGNSGNF+TG +N GH Sbjct 299 IGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGNFGIGNSGNFNTGGWNSGH 358 Query 357 GNTGFLNAGSFNTGMFDVGNANTGSFNVGHYNFGAFNPGPSNTGTFNTGGANTGWFNTGS 416 GNTGF NAGSFNTGM DVGNANTGS N G YN G FNPG SNTGTFNTG ANTG+ N G+ Sbjct 359 GNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSNTGTFNTGNANTGFLNAGN 418 Query 417 INTGAFNIGDMNNGLFNTGDMNNGVFYRGVGQGSLQFAITSPDLTLPSLEIPGISVPAFS 476 INTG FNIG MNNGLFNTGDMNNGVFYRGVGQGSLQF+IT+PDLTLP L+IPGISVPAFS Sbjct 419 INTGVFNIGHMNNGLFNTGDMNNGVFYRGVGQGSLQFSITTPDLTLPPLQIPGISVPAFS 478 Query 477 LPAITLPSLTIPAVTTPANVTVGAFDLPGLTVPSLTIPAAMTPANITVGAFDLPGLTVPS 536 LPAITLPSLTIPA TTPAN+TVGAF LPGLT+PSL IPAA TPANITVGAF LPGLT+PS Sbjct 479 LPAITLPSLTIPAATTPANITVGAFSLPGLTLPSLNIPAATTPANITVGAFSLPGLTLPS 538 Query 537 LTIPATTTPANITVGA--------------------------FNLPQLSIPSVTVPPITI 570 L IPA TTPANITVGA F LP LSIPSV +PP+T+ Sbjct 539 LNIPAATTPANITVGAFSLPGLTLPSLNIPAATTPANITVSGFQLPPLSIPSVAIPPVTV 598 Query 571 PAGTALGAFNLPTLSIPSVTVPPITIPAGTTVGGFTLPTIHTPLISTPQISIGGFSTPGI 630 P T +GAFNLP L IP VT+P +TIPAG T+GGF+LP IHT I+ QI +G F P I Sbjct 599 PPIT-VGAFNLPPLQIPEVTIPQLTIPAGITIGGFSLPAIHTQPITVGQIGVGQFGLPSI 657 Query 631 ATQA--NSGVINLPTFSLNGITITNLVVFIPNNITALQTNMPGVFPQIGGFANTPPAFIN 688 ++ I +P F GI T QTN+P + P GG + Sbjct 658 GWDVFLSTPRITVPAF---GIPFT----------LQFQTNVPALQPPGGGLST------- 697 Query 689 TGTITVGGGQINGVGFSIGAINVTPFTLPNVVIQPWSLGG-------------------- 728 F+ GA+ F LP +V+ P++L G Sbjct 698 ---------------FTNGALIFGEFDLPQLVVHPYTLTGPIVIGSFFLPAFNIPGIDVP 742 Query 729 -ISVDGFTLPEISTQEFTTPALTISPIGVGALSLPDITTQQFTTPELTI----------- 776 I+VDGFTLP+I+T TTP I PIGVG +LP ITTQ+ TPELTI Sbjct 743 AINVDGFTLPQITTPAITTPEFAIPPIGVGGFTLPQITTQEIITPELTINSIGVGGFTLP 802 Query 777 --------------DPITLGGFTLPQLSIPAITTPAFTIDPIALGGFTLPQIMTPEITTP 822 DPI L GFTLPQ++ P ITTP TIDPI L GFTLPQI TP ITTP Sbjct 803 QITTPPITTPPLTIDPINLTGFTLPQITTPPITTPPLTIDPINLTGFTLPQITTPPITTP 862 Query 823 PFAIDPIGLSGFTLPQVNIPEITTPEFTIQPVGLAAFTTPALTIASIHLPSTTMGGFAIP 882 P IDPI L+GFTLPQ+ P ITTP TI+P+G+ FTTP LT+ IHLPSTT+G FAIP Sbjct 863 PLTIDPINLTGFTLPQITTPPITTPPLTIEPIGVGGFTTPPLTVPGIHLPSTTIGAFAIP 922 Query 883 AGPGYFNSSATPSLGFFNAGIGGNSGFGNSGSGLSGWFNTSPVGLLAGSGYQNYGGLISG 942 GPGYFNSS PS GFFN+G GGNSGFGN+GSGLSGWFNT+P GLL GSGYQN+GGL SG Sbjct 923 GGPGYFNSSTAPSSGFFNSGAGGNSGFGNNGSGLSGWFNTNPAGLLGGSGYQNFGGLSSG 982 Query 943 FSNLGSGISGFANTGTLPFAVTSLVSGLANIGNNLSGLFFQSTT 986 FSNLGSG+SGFAN G LPF+V S+VSG ANIG NL+G FFQ TT Sbjct 983 FSNLGSGVSGFANRGILPFSVASVVSGFANIGTNLAG-FFQGTT 1025 >gi|289745807|ref|ZP_06505185.1| PPE family protein [Mycobacterium tuberculosis 02_1987] gi|289686335|gb|EFD53823.1| PPE family protein [Mycobacterium tuberculosis 02_1987] Length=1053 Score = 984 bits (2544), Expect = 0.0, Method: Compositional matrix adjust. Identities = 690/1059 (66%), Positives = 788/1059 (75%), Gaps = 80/1059 (7%) Query 1 MHYSVLPPEINSALIFAGAGSGPMLAAASAWDGLATELASAAVSFGSVTAGLVGGSWQGR 60 M++SVLPPEINSALIFAGAG PM AAA+AWDGLA ELASAA SFGSVT+GLVGG+WQG Sbjct 1 MNFSVLPPEINSALIFAGAGPEPMAAAATAWDGLAMELASAAASFGSVTSGLVGGAWQGA 60 Query 61 SSVAMAAAAAPYAGWLAAAATQAEQAATQAQVMVAEFEAVRLAMVQPALVAANRSGLISL 120 SS AMAAAAAPYA WLAAAA QAEQ A QA M+AEFEAV+ A+VQP LVAANR+ L+SL Sbjct 61 SSSAMAAAAAPYAAWLAAAAVQAEQTAAQAAAMIAEFEAVKTAVVQPMLVAANRADLVSL 120 Query 121 VISNLFGQNAPAIAAAEAAYEEMWALDVSAMAAYHSGASAVAVALPAFALPLR----LPA 176 V+SNLFGQNAPAIAA EA YE+MWA DVSAM+AYH+GASA+A AL F+ PL+ LPA Sbjct 121 VMSNLFGQNAPAIAAIEATYEQMWAADVSAMSAYHAGASAIASALSPFSKPLQNLAGLPA 180 Query 177 GLAAGPAAVVTALTTAVGMPTFAGRAIAASLGLANVGGGNLGNANNGLGNIGNANLGNNN 236 LA+G A A+T A G+P AG A +LG+ANVGGGN+GNANNGL NIGNANLGN N Sbjct 181 WLASG--APAAAMTAAAGIPALAGGPTAINLGIANVGGGNVGNANNGLANIGNANLGNYN 238 Query 237 LGSGNFGSFNIGSANLGGNNIGIGNAGANNFGLANLGNLNTGFANAGIGNFGIANTGNNN 296 GSGNFG+ NIGSA+LG NNIG GN G+NN G+ NLGNLNTGFAN G+GNFG NTGNNN Sbjct 239 FGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLGNLNTGFANTGLGNFGFGNTGNNN 298 Query 297 IGNGLTGNNQIGIGGLNSGNGNVGLFNAGSANIGFFNSGNGNFGIGNSGNFSTGLFNPGH 356 IG GLTGNNQIGIGGLNSG GN GLFN+GS N+GFFNSGNGNFGIGNSGNF+TG +N GH Sbjct 299 IGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGNFGIGNSGNFNTGGWNSGH 358 Query 357 GNTGFLNAGSFNTGMFDVGNANTGSFNVGHYNFGAFNPGPSNTGTFNTGGANTGWFNTGS 416 GNTGF NAGSFNTGM DVGNANTGS N G YN G FNPG SNTGTFNTG ANTG+ N G+ Sbjct 359 GNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSNTGTFNTGNANTGFLNAGN 418 Query 417 INTGAFNIGDMNNGLFNTGDMNNGVFYRGVGQGSLQFAITSPDLTLPSLEIPGISVPAFS 476 INTG FNIG MNNGLFNTGDMNNGVFYRGVGQGSLQF+IT+PDLTLP L+IPGISVPAFS Sbjct 419 INTGVFNIGHMNNGLFNTGDMNNGVFYRGVGQGSLQFSITTPDLTLPPLQIPGISVPAFS 478 Query 477 LPAITLPSLTIPAVTTPANVTVGAFDLPGLTVPSLTIPAAMTPANITVGAFDLPGLTVPS 536 LPAITLPSLTIPA TTPAN+TVGAF LPGLT+PSLTIPAA TPANITVGAF LPGLT+PS Sbjct 479 LPAITLPSLTIPAATTPANITVGAFSLPGLTLPSLTIPAATTPANITVGAFSLPGLTLPS 538 Query 537 LTIPATTTPANITVGAFNLPQLSIPSVTVPPITIPAGTALGAFNLPTLSIPSVTVPPITI 596 L IPA TTPANITVGAF+LP L++PS+ +P T PA +GAF+LP L++PS+ +P T Sbjct 539 LNIPAATTPANITVGAFSLPGLTLPSLNIPAATTPANITVGAFSLPGLTLPSLNIPAATT 598 Query 597 PAGTTVGGF-----TLPTIHTPLISTP-QISIGGFSTPGIATQA-----------NSGVI 639 PA TVG F TLP+++ P +TP I++ GF P ++ + G Sbjct 599 PANITVGAFSLPGLTLPSLNIPAATTPANITVSGFQLPPLSIPSVAIPPVTVPPITVGAF 658 Query 640 NLPTFSLNGITITNLVVFIPNNITALQTNMPGV----------------FPQIGG--FAN 681 NLP + +TI L IP IT ++P + P IG F + Sbjct 659 NLPPLQIPEVTIPQLT--IPAGITIGGFSLPAIHTQPITVGQIGVGQFGLPSIGWDVFLS 716 Query 682 TP----PAF---------INTGTITVGGGQINGVGFSIGAINVTPFTLPNVVIQPWSLGG 728 TP PAF N + GG ++ F+ GA+ F LP +V+ P++L G Sbjct 717 TPRITVPAFGIPFTLQFQTNVPALQPPGGGLS--TFTNGALIFGEFDLPQLVVHPYTLTG 774 Query 729 ---------------------ISVDGFTLPEISTQEFTTPALTISPIGVGALSLPDITTQ 767 I+VDGFTLP+I+T TTP I PIGVG +LP ITTQ Sbjct 775 PIVIGSFFLPAFNIPGIDVPAINVDGFTLPQITTPAITTPEFAIPPIGVGGFTLPQITTQ 834 Query 768 QFTTPELTIDPITLGGFTLPQLSIPAITTPAFTIDPIALGGFTLPQIMTPEITTPPFAID 827 + TPELTI+ I +GGFTLPQ++ P ITTP TIDPI L GFTLPQI TP ITTPP ID Sbjct 835 EIITPELTINSIGVGGFTLPQITTPPITTPPLTIDPINLTGFTLPQITTPPITTPPLTID 894 Query 828 PIGLSGFTLPQVNIPEITTPEFTIQPVGLAAFTTPALTIASIHLPSTTMGGFAIPAGPGY 887 PI L+GFTLPQ+ P ITTP TI+P+G+ FTTP LT+ IHLPSTT+G FAIP GPGY Sbjct 895 PINLTGFTLPQITTPPITTPPLTIEPIGVGGFTTPPLTVPGIHLPSTTIGAFAIPGGPGY 954 Query 888 FNSSATPSLGFFNAGIGGNSGFGNSGSGLSGWFNTSPVGLLAGSGYQNYGGLISGFSNLG 947 FNSS PS GFFN+G GGNSGFGN+GSGLSGWFNT P GLL GSGYQN+GGL SGFSNLG Sbjct 955 FNSSTAPSSGFFNSGAGGNSGFGNNGSGLSGWFNTKPAGLLGGSGYQNFGGLSSGFSNLG 1014 Query 948 SGISGFANTGTLPFAVTSLVSGLANIGNNLSGLFFQSTT 986 SG+SGFAN G LPF+V S+VSG ANIG NL+G FFQ TT Sbjct 1015 SGVSGFANRGILPFSVASVVSGFANIGTNLAG-FFQGTT 1052 >gi|339298334|gb|AEJ50444.1| PPE family protein [Mycobacterium tuberculosis CCDC5180] Length=1053 Score = 984 bits (2544), Expect = 0.0, Method: Compositional matrix adjust. Identities = 690/1059 (66%), Positives = 789/1059 (75%), Gaps = 80/1059 (7%) Query 1 MHYSVLPPEINSALIFAGAGSGPMLAAASAWDGLATELASAAVSFGSVTAGLVGGSWQGR 60 M++SVLPPEINSALIFAGAG PM AAA+AWDGLA ELASAA SFGSVT+GLVGG+WQG Sbjct 1 MNFSVLPPEINSALIFAGAGPEPMAAAATAWDGLAMELASAAASFGSVTSGLVGGAWQGA 60 Query 61 SSVAMAAAAAPYAGWLAAAATQAEQAATQAQVMVAEFEAVRLAMVQPALVAANRSGLISL 120 SS AMAAAAAPYA WLAAAA QAEQ A QA M+AEFEAV+ A+VQP LVAANR+ L+SL Sbjct 61 SSSAMAAAAAPYAAWLAAAAVQAEQTAAQAAAMIAEFEAVKTAVVQPMLVAANRADLVSL 120 Query 121 VISNLFGQNAPAIAAAEAAYEEMWALDVSAMAAYHSGASAVAVALPAFALPLR----LPA 176 V+SNLFGQNAPAIAA EA YE+MWA DVSAM+AYH+GASA+A AL F+ PL+ LPA Sbjct 121 VMSNLFGQNAPAIAAIEATYEQMWAADVSAMSAYHAGASAIASALSPFSKPLQNLAGLPA 180 Query 177 GLAAGPAAVVTALTTAVGMPTFAGRAIAASLGLANVGGGNLGNANNGLGNIGNANLGNNN 236 LA+G A A+T A G+P AG A +LG+ANVGGGN+GNANNGL NIGNANLGN N Sbjct 181 WLASG--APAAAMTAAAGIPALAGGPTAINLGIANVGGGNVGNANNGLANIGNANLGNYN 238 Query 237 LGSGNFGSFNIGSANLGGNNIGIGNAGANNFGLANLGNLNTGFANAGIGNFGIANTGNNN 296 GSGNFG+ NIGSA+LG NNIG GN G+NN G+ NLGNLNTGFAN G+GNFG NTGNNN Sbjct 239 FGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLGNLNTGFANTGLGNFGFGNTGNNN 298 Query 297 IGNGLTGNNQIGIGGLNSGNGNVGLFNAGSANIGFFNSGNGNFGIGNSGNFSTGLFNPGH 356 IG GLTGNNQIGIGGLNSG GN GLFN+GS N+GFFNSGNGNFGIGNSGNF+TG +N GH Sbjct 299 IGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGNFGIGNSGNFNTGGWNSGH 358 Query 357 GNTGFLNAGSFNTGMFDVGNANTGSFNVGHYNFGAFNPGPSNTGTFNTGGANTGWFNTGS 416 GNTGF NAGSFNTGM DVGNANTGS N G YN G FNPG SNTGTFNTG ANTG+ N G+ Sbjct 359 GNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSNTGTFNTGNANTGFLNAGN 418 Query 417 INTGAFNIGDMNNGLFNTGDMNNGVFYRGVGQGSLQFAITSPDLTLPSLEIPGISVPAFS 476 INTG FNIG MNNGLFNTGDMNNGVFYRGVGQGSLQF+IT+PDLTLP L+IPGISVPAFS Sbjct 419 INTGVFNIGHMNNGLFNTGDMNNGVFYRGVGQGSLQFSITTPDLTLPPLQIPGISVPAFS 478 Query 477 LPAITLPSLTIPAVTTPANVTVGAFDLPGLTVPSLTIPAAMTPANITVGAFDLPGLTVPS 536 LPAITLPSLTIPA TTPAN+TVGAF LPGLT+PSLTIPAA TPANITVGAF LPGLT+PS Sbjct 479 LPAITLPSLTIPAATTPANITVGAFSLPGLTLPSLTIPAATTPANITVGAFSLPGLTLPS 538 Query 537 LTIPATTTPANITVGAFNLPQLSIPSVTVPPITIPAGTALGAFNLPTLSIPSVTVPPITI 596 L IPA TTPANITVGAF+LP L++PS+ +P T PA +GAF+LP L++PS+ +P T Sbjct 539 LNIPAATTPANITVGAFSLPGLTLPSLNIPAATTPANITVGAFSLPGLTLPSLNIPAATT 598 Query 597 PAGTTVGGF-----TLPTIHTPLISTP-QISIGGFSTPGIATQA-----------NSGVI 639 PA TVG F TLP+++ P +TP I++ GF P ++ + G Sbjct 599 PANITVGAFSLPGLTLPSLNIPAATTPANITVSGFQLPPLSIPSVAIPPVTVPPITVGAF 658 Query 640 NLPTFSLNGITITNLVVFIPNNITALQTNMPGV----------------FPQIGG--FAN 681 NLP + +TI L IP IT ++P + P IG F + Sbjct 659 NLPPLQIPEVTIPQLT--IPAGITIGGFSLPAIHTQPITVGQIGVGQFGLPSIGWDVFLS 716 Query 682 TP----PAF---------INTGTITVGGGQINGVGFSIGAINVTPFTLPNVVIQPWSLGG 728 TP PAF N + GG ++ F+ GA+ F LP +V+ P++L G Sbjct 717 TPRITVPAFGIPFTLQFQTNVPALQPPGGGLS--TFTNGALIFGEFDLPQLVVHPYTLTG 774 Query 729 ---------------------ISVDGFTLPEISTQEFTTPALTISPIGVGALSLPDITTQ 767 I+VDGFTLP+I+T TTP I PIGVG +LP ITTQ Sbjct 775 PIVIGSFFLPAFNIPGIDVPAINVDGFTLPQITTPAITTPEFAIPPIGVGGFTLPQITTQ 834 Query 768 QFTTPELTIDPITLGGFTLPQLSIPAITTPAFTIDPIALGGFTLPQIMTPEITTPPFAID 827 + TPELTI+ I +GGFTLPQ++ P ITTP TIDPI L GFTLPQI TP ITTPP ID Sbjct 835 EIITPELTINSIGVGGFTLPQITTPPITTPPLTIDPINLTGFTLPQITTPPITTPPLTID 894 Query 828 PIGLSGFTLPQVNIPEITTPEFTIQPVGLAAFTTPALTIASIHLPSTTMGGFAIPAGPGY 887 PI L+GFTLPQ+ P ITTP TI+P+G+ FTTP LT+ IHLPSTT+G FAIP GPGY Sbjct 895 PINLTGFTLPQITTPPITTPPLTIEPIGVGGFTTPPLTVPGIHLPSTTIGAFAIPGGPGY 954 Query 888 FNSSATPSLGFFNAGIGGNSGFGNSGSGLSGWFNTSPVGLLAGSGYQNYGGLISGFSNLG 947 FNSS PS GFFN+G GGNSGFGN+GSGLSGWFNT+P GLL GSGYQN+GGL SGFSNLG Sbjct 955 FNSSTAPSSGFFNSGAGGNSGFGNNGSGLSGWFNTNPAGLLGGSGYQNFGGLSSGFSNLG 1014 Query 948 SGISGFANTGTLPFAVTSLVSGLANIGNNLSGLFFQSTT 986 SG+SGFAN G LPF+V S+VSG ANIG NL+G FFQ TT Sbjct 1015 SGVSGFANRGILPFSVASVVSGFANIGTNLAG-FFQGTT 1052 >gi|253799205|ref|YP_003032206.1| PPE family protein [Mycobacterium tuberculosis KZN 1435] gi|289554473|ref|ZP_06443683.1| PPE family protein [Mycobacterium tuberculosis KZN 605] gi|253320708|gb|ACT25311.1| PPE family protein [Mycobacterium tuberculosis KZN 1435] gi|289439105|gb|EFD21598.1| PPE family protein [Mycobacterium tuberculosis KZN 605] gi|328458960|gb|AEB04383.1| hypothetical protein TBSG_02254 [Mycobacterium tuberculosis KZN 4207] Length=1025 Score = 982 bits (2538), Expect = 0.0, Method: Compositional matrix adjust. Identities = 689/1063 (65%), Positives = 771/1063 (73%), Gaps = 116/1063 (10%) Query 1 MHYSVLPPEINSALIFAGAGSGPMLAAASAWDGLATELASAAVSFGSVTAGLVGGSWQGR 60 M++SVLPPEINSALIFAGAG PM AAA+AWDGLA ELASAA SFGSVT+GLVGG+WQG Sbjct 1 MNFSVLPPEINSALIFAGAGPEPMAAAATAWDGLAMELASAAASFGSVTSGLVGGAWQGA 60 Query 61 SSVAMAAAAAPYAGWLAAAATQAEQAATQAQVMVAEFEAVRLAMVQPALVAANRSGLISL 120 SS AMAAAAAPYA WLAAAA QAEQ A QA M+AEFEAV+ A+VQP LVAANR+ L+SL Sbjct 61 SSSAMAAAAAPYAAWLAAAAVQAEQTAAQAAAMIAEFEAVKTAVVQPMLVAANRADLVSL 120 Query 121 VISNLFGQNAPAIAAAEAAYEEMWALDVSAMAAYHSGASAVAVALPAFALPLR----LPA 176 V+SNLFGQNAPAIAA EA YE+MWA DVSAM+AYH+GASA+A AL F+ PL+ LPA Sbjct 121 VMSNLFGQNAPAIAAIEATYEQMWAADVSAMSAYHAGASAIASALSPFSKPLQNLAGLPA 180 Query 177 GLAAGPAAVVTALTTAVGMPTFAGRAIAASLGLANVGGGNLGNANNGLGNIGNANLGNNN 236 LA+G A A+T A G+P AG A +LG+ANVGGGN+GNANNGL NIGNANLGN N Sbjct 181 WLASG--APAAAMTAAAGIPALAGGPTAINLGIANVGGGNVGNANNGLANIGNANLGNYN 238 Query 237 LGSGNFGSFNIGSANLGGNNIGIGNAGANNFGLANLGNLNTGFANAGIGNFGIANTGNNN 296 GSGNFG+ NIGSA+LG NNIG GN G+NN G+ NLGNLNTGFAN G+GNFG NTGNNN Sbjct 239 FGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLGNLNTGFANTGLGNFGFGNTGNNN 298 Query 297 IGNGLTGNNQIGIGGLNSGNGNVGLFNAGSANIGFFNSGNGNFGIGNSGNFSTGLFNPGH 356 IG GLTGNNQIGIGGLNSG GN GLFN+GS N+GFFNSGNGNFGIGNSGNF+TG +N GH Sbjct 299 IGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGNFGIGNSGNFNTGGWNSGH 358 Query 357 GNTGFLNAGSFNTGMFDVGNANTGSFNVGHYNFGAFNPGPSNTGTFNTGGANTGWFNTGS 416 GNTGF NAGSFNTGM DVGNANTGS N G YN G FNPG SNTGTFNTG ANTG+ N G+ Sbjct 359 GNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSNTGTFNTGNANTGFLNAGN 418 Query 417 INTGAFNIGDMNNGLFNTGDMNNGVFYRGVGQGSLQFAITSPDLTLPSLEIPGISVPAFS 476 INTG FNIG MNNGLFNTGDMNNGVFYRGVGQGSLQF+IT+PDLTLP L+IPGISVPAFS Sbjct 419 INTGVFNIGHMNNGLFNTGDMNNGVFYRGVGQGSLQFSITTPDLTLPPLQIPGISVPAFS 478 Query 477 LPAITLPSLTIPAVTTPANVTVGAFDLPGLTVPSLTIPAAMTPANITVGAFDLPGLTVPS 536 LPAITLPSLTIPA TTPAN+TVGAF LPGLT+PSL IPAA TPANITVGAF LPGLT+PS Sbjct 479 LPAITLPSLTIPAATTPANITVGAFSLPGLTLPSLNIPAATTPANITVGAFSLPGLTLPS 538 Query 537 LTIPATTTPANITVGAFNLPQLSIPSVTVPPITIPAGTALGAFNLPTLSIPSVTVPPITI 596 L IPA TTPANITV F LP LSIPSV +PP+T+P T +GAFNLP L IP VT+P +TI Sbjct 539 LNIPAATTPANITVSGFQLPPLSIPSVAIPPVTVPPIT-VGAFNLPPLQIPEVTIPQLTI 597 Query 597 PAGTTVGGFTLPTIHTPLISTPQISIGGFSTPGIATQA--NSGVINLPTFSLNGITITNL 654 PAG T+GGF+LP IHT I+ QI +G F P I ++ I +P F GI T Sbjct 598 PAGITIGGFSLPAIHTQPITVGQIGVGQFGLPSIGWDVFLSTPRITVPAF---GIPFT-- 652 Query 655 VVFIPNNITALQTNMPGVFPQIGGFANTPPAFINTGTITVGGGQINGVGFSIGAINVTPF 714 QTN+P + P GG + F+ GA+ F Sbjct 653 --------LQFQTNVPALQPPGGGLST----------------------FTNGALIFGEF 682 Query 715 TLPNVVIQPWSLGG---------------------ISVDGFTLPEISTQEFTTPALTISP 753 LP +V+ P++L G I+VDGFTLP+I+T TTP I P Sbjct 683 DLPQLVVHPYTLTGPIVIGSFFLPAFNIPGIDVPAINVDGFTLPQITTPAITTPEFAIPP 742 Query 754 IGVGALSLPDITTQQFTTPELTI-------------------------DPITLGGFTLPQ 788 IGVG +LP ITTQ+ TPELTI DPI L GFTLPQ Sbjct 743 IGVGGFTLPQITTQEIITPELTINSIGVGGFTLPQITTPPITTPPLTIDPINLTGFTLPQ 802 Query 789 LSIPAITTPAFTIDPIALGGFTLPQIMTPEITTPPFAIDPIGLSGFTLPQVNIPEITTPE 848 ++ P ITTP TIDPI L GFTLPQI TP ITTPP IDPI L+GFTLPQ+ P ITTP Sbjct 803 ITTPPITTPPLTIDPINLTGFTLPQITTPPITTPPLTIDPINLTGFTLPQITTPPITTPP 862 Query 849 FTIQPVGLAAF-------------------------TTPALTIASIHLPSTTMGGFAIPA 883 TI P+ L F TTP LT+ IHLPSTT+G FAIP Sbjct 863 LTIDPINLTGFTLPQSTTPPITTPPLTIEPIGVGGFTTPPLTVPGIHLPSTTIGAFAIPG 922 Query 884 GPGYFNSSATPSLGFFNAGIGGNSGFGNSGSGLSGWFNTSPVGLLAGSGYQNYGGLISGF 943 GPGYFNSS PS GFFN+G GGNSGFGN+GSGLSGWFNT+P GLL GSGYQN+GGL SGF Sbjct 923 GPGYFNSSTAPSSGFFNSGAGGNSGFGNNGSGLSGWFNTNPAGLLGGSGYQNFGGLSSGF 982 Query 944 SNLGSGISGFANTGTLPFAVTSLVSGLANIGNNLSGLFFQSTT 986 SNLGSG+SGFAN G LPF+V S+VSG ANIG NL+G FFQ TT Sbjct 983 SNLGSGVSGFANRGILPFSVASVVSGFANIGTNLAG-FFQGTT 1024 >gi|57116904|ref|YP_177830.1| PPE family protein [Mycobacterium tuberculosis H37Rv] gi|148661552|ref|YP_001283075.1| PPE family protein [Mycobacterium tuberculosis H37Ra] gi|81415779|sp|Q79FL2.1|PPE24_MYCTU RecName: Full=Uncharacterized PPE family protein PPE24 gi|38684053|emb|CAE55416.1| PPE FAMILY PROTEIN [Mycobacterium tuberculosis H37Rv] gi|148505704|gb|ABQ73513.1| PPE family protein [Mycobacterium tuberculosis H37Ra] Length=1053 Score = 979 bits (2532), Expect = 0.0, Method: Compositional matrix adjust. Identities = 688/1059 (65%), Positives = 787/1059 (75%), Gaps = 80/1059 (7%) Query 1 MHYSVLPPEINSALIFAGAGSGPMLAAASAWDGLATELASAAVSFGSVTAGLVGGSWQGR 60 M++SVLPPEINSALIFAGAG PM AAA+AWDGLA ELASAA SFGSVT+GLVGG+WQG Sbjct 1 MNFSVLPPEINSALIFAGAGPEPMAAAATAWDGLAMELASAAASFGSVTSGLVGGAWQGA 60 Query 61 SSVAMAAAAAPYAGWLAAAATQAEQAATQAQVMVAEFEAVRLAMVQPALVAANRSGLISL 120 SS AMAAAAAPYA WLAAAA QAEQ A QA M+AEFEAV+ A+VQP LVAANR+ L+SL Sbjct 61 SSSAMAAAAAPYAAWLAAAAVQAEQTAAQAAAMIAEFEAVKTAVVQPMLVAANRADLVSL 120 Query 121 VISNLFGQNAPAIAAAEAAYEEMWALDVSAMAAYHSGASAVAVALPAFALPLR----LPA 176 V+SNLFGQNAPAIAA EA YE+MWA DVSAM+AYH+GASA+A AL F+ PL+ LPA Sbjct 121 VMSNLFGQNAPAIAAIEATYEQMWAADVSAMSAYHAGASAIASALSPFSKPLQNLAGLPA 180 Query 177 GLAAGPAAVVTALTTAVGMPTFAGRAIAASLGLANVGGGNLGNANNGLGNIGNANLGNNN 236 LA+G A A+T A G+P AG A +LG+ANVGGGN+GNANNGL NIGNANLGN N Sbjct 181 WLASG--APAAAMTAAAGIPALAGGPTAINLGIANVGGGNVGNANNGLANIGNANLGNYN 238 Query 237 LGSGNFGSFNIGSANLGGNNIGIGNAGANNFGLANLGNLNTGFANAGIGNFGIANTGNNN 296 GSGNFG+ NIGSA+LG NNIG GN G+NN G+ NLGNLNTGFAN G+GNFG NTGNNN Sbjct 239 FGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLGNLNTGFANTGLGNFGFGNTGNNN 298 Query 297 IGNGLTGNNQIGIGGLNSGNGNVGLFNAGSANIGFFNSGNGNFGIGNSGNFSTGLFNPGH 356 IG GLTGNNQIGIGGLNSG GN GLFN+GS N+GFFNSGNGNFGIGNSGNF+TG +N GH Sbjct 299 IGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGNFGIGNSGNFNTGGWNSGH 358 Query 357 GNTGFLNAGSFNTGMFDVGNANTGSFNVGHYNFGAFNPGPSNTGTFNTGGANTGWFNTGS 416 GNTGF NAGSFNTGM DVGNANTGS N G YN G FNPG SNTGTFNTG ANTG+ N G+ Sbjct 359 GNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSNTGTFNTGNANTGFLNAGN 418 Query 417 INTGAFNIGDMNNGLFNTGDMNNGVFYRGVGQGSLQFAITSPDLTLPSLEIPGISVPAFS 476 INTG FNIG MNNGLFNTGDMNNGVFYRGVGQGSLQF+IT+PDLTLP L+IPGISVPAFS Sbjct 419 INTGVFNIGHMNNGLFNTGDMNNGVFYRGVGQGSLQFSITTPDLTLPPLQIPGISVPAFS 478 Query 477 LPAITLPSLTIPAVTTPANVTVGAFDLPGLTVPSLTIPAAMTPANITVGAFDLPGLTVPS 536 LPAITLPSL IPA TTPAN+TVGAF LPGLT+PSL IPAA TPANITVGAF LPGLT+PS Sbjct 479 LPAITLPSLNIPAATTPANITVGAFSLPGLTLPSLNIPAATTPANITVGAFSLPGLTLPS 538 Query 537 LTIPATTTPANITVGAFNLPQLSIPSVTVPPITIPAGTALGAFNLPTLSIPSVTVPPITI 596 L IPA TTPANITVGAF+LP L++PS+ +P T PA +GAF+LP L++PS+ +P T Sbjct 539 LNIPAATTPANITVGAFSLPGLTLPSLNIPAATTPANITVGAFSLPGLTLPSLNIPAATT 598 Query 597 PAGTTVGGF-----TLPTIHTPLISTP-QISIGGFSTPGIATQA-----------NSGVI 639 PA TVG F TLP+++ P +TP I++ GF P ++ + G Sbjct 599 PANITVGAFSLPGLTLPSLNIPAATTPANITVSGFQLPPLSIPSVAIPPVTVPPITVGAF 658 Query 640 NLPTFSLNGITITNLVVFIPNNITALQTNMPGV----------------FPQIGG--FAN 681 NLP + +TI L IP IT ++P + P IG F + Sbjct 659 NLPPLQIPEVTIPQLT--IPAGITIGGFSLPAIHTQPITVGQIGVGQFGLPSIGWDVFLS 716 Query 682 TP----PAF---------INTGTITVGGGQINGVGFSIGAINVTPFTLPNVVIQPWSLGG 728 TP PAF N + GG ++ F+ GA+ F LP +V+ P++L G Sbjct 717 TPRITVPAFGIPFTLQFQTNVPALQPPGGGLS--TFTNGALIFGEFDLPQLVVHPYTLTG 774 Query 729 ---------------------ISVDGFTLPEISTQEFTTPALTISPIGVGALSLPDITTQ 767 I+VDGFTLP+I+T TTP I PIGVG +LP ITTQ Sbjct 775 PIVIGSFFLPAFNIPGIDVPAINVDGFTLPQITTPAITTPEFAIPPIGVGGFTLPQITTQ 834 Query 768 QFTTPELTIDPITLGGFTLPQLSIPAITTPAFTIDPIALGGFTLPQIMTPEITTPPFAID 827 + TPELTI+ I +GGFTLPQ++ P ITTP TIDPI L GFTLPQI TP ITTPP ID Sbjct 835 EIITPELTINSIGVGGFTLPQITTPPITTPPLTIDPINLTGFTLPQITTPPITTPPLTID 894 Query 828 PIGLSGFTLPQVNIPEITTPEFTIQPVGLAAFTTPALTIASIHLPSTTMGGFAIPAGPGY 887 PI L+GFTLPQ+ P ITTP TI+P+G+ FTTP LT+ IHLPSTT+G FAIP GPGY Sbjct 895 PINLTGFTLPQITTPPITTPPLTIEPIGVGGFTTPPLTVPGIHLPSTTIGAFAIPGGPGY 954 Query 888 FNSSATPSLGFFNAGIGGNSGFGNSGSGLSGWFNTSPVGLLAGSGYQNYGGLISGFSNLG 947 FNSS PS GFFN+G GGNSGFGN+GSGLSGWFNT+P GLL GSGYQN+GGL SGFSNLG Sbjct 955 FNSSTAPSSGFFNSGAGGNSGFGNNGSGLSGWFNTNPAGLLGGSGYQNFGGLSSGFSNLG 1014 Query 948 SGISGFANTGTLPFAVTSLVSGLANIGNNLSGLFFQSTT 986 SG+SGFAN G LPF+V S+VSG ANIG NL+G FFQ TT Sbjct 1015 SGVSGFANRGILPFSVASVVSGFANIGTNLAG-FFQGTT 1052 >gi|341601679|emb|CCC64352.1| PPE family protein [Mycobacterium bovis BCG str. Moreau RDJ] Length=976 Score = 976 bits (2522), Expect = 0.0, Method: Compositional matrix adjust. Identities = 662/1043 (64%), Positives = 747/1043 (72%), Gaps = 125/1043 (11%) Query 1 MHYSVLPPEINSALIFAGAGSGPMLAAASAWDGLATELASAAVSFGSVTAGLVGGSWQGR 60 M++SVLPPEINSALIFAGAG PM AAA+AWDGLA ELASAA SFGSVT+GLVGG+WQG Sbjct 1 MNFSVLPPEINSALIFAGAGPEPMAAAATAWDGLAMELASAAASFGSVTSGLVGGAWQGA 60 Query 61 SSVAMAAAAAPYAGWLAAAATQAEQAATQAQVMVAEFEAVRLAMVQPALVAANRSGLISL 120 SS AMAAAAAPYA WLAAAA QAEQ A QA M+AEFEAV+ A+VQP LVAANR+ L+SL Sbjct 61 SSSAMAAAAAPYAAWLAAAAVQAEQTAAQAAAMIAEFEAVKTAVVQPMLVAANRADLVSL 120 Query 121 VISNLFGQNAPAIAAAEAAYEEMWALDVSAMAAYHSGASAVAVALPAFALPLR----LPA 176 V+SNLFGQNAPAIAA EA YE+MWA DVSAM+AYH+GASA+A AL F+ PL+ LPA Sbjct 121 VMSNLFGQNAPAIAAIEATYEQMWAADVSAMSAYHAGASAIASALSPFSKPLQNLAGLPA 180 Query 177 GLAAGPAAVVTALTTAVGMPTFAGRAIAASLGLANVGGGNLGNANNGLGNIGNANLGNNN 236 LA+G A A+T A G+P AG A +LG+ANVGGGN+GNANNGL NIGNANLGN N Sbjct 181 WLASG--APAAAMTAAAGIPALAGGPTAINLGIANVGGGNVGNANNGLANIGNANLGNYN 238 Query 237 LGSGNFGSFNIGSANLGGNNIGIGNAGANNFGLANLGNLNTGFANAGIGNFGIANTGNNN 296 GSGNFG+ NIGSA+LG NNIG GN G+NN G+ NLGNLNTGFAN G+GNFG NTGNNN Sbjct 239 FGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLGNLNTGFANTGLGNFGFGNTGNNN 298 Query 297 IGNGLTGNNQIGIGGLNSGNGNVGLFNAGSANIGFFNSGNGNFGIGNSGNFSTGLFNPGH 356 IG GLTGNNQIGIGGLNSG GN GLFN+GS N+GFFNSGNGNFGIGNSGNF+TG +N GH Sbjct 299 IGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGNFGIGNSGNFNTGGWNSGH 358 Query 357 GNTGFLNAGSFNTGMFDVGNANTGSFNVGHYNFGAFNPGPSNTGTFNTGGANTGWFNTGS 416 GNTGF NAGSFNTGM DVGNANTGS N G YN G FNPG SNTGTFNTG ANTG+ N G+ Sbjct 359 GNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSNTGTFNTGNANTGFLNAGN 418 Query 417 INTGAFNIGDMNNGLFNTGDMNNGVFYRGVGQGSLQFAITSPDLTLPSLEIPGISVPAFS 476 INTG FNIG MNNGLFNTGDMNNGVFYRGVGQGSLQF+IT+PDLTLP L+IPGISVPAFS Sbjct 419 INTGVFNIGHMNNGLFNTGDMNNGVFYRGVGQGSLQFSITTPDLTLPPLQIPGISVPAFS 478 Query 477 LPAITLPSLTIPAVTTPANVTVGAFDLPGLTVPSLTIPAAMTPANITVGAFDLPGLTVPS 536 LPAITLPSLTIPA TTPAN+TVGAF LPGLT+PSL IPAA TPANITVGAF LPGLT+PS Sbjct 479 LPAITLPSLTIPAATTPANITVGAFSLPGLTLPSLNIPAATTPANITVGAFSLPGLTLPS 538 Query 537 LTIPATTTPANITVGAF--------------------------NLPQLSIPSVTVPPITI 570 L IPA TTPANITVGAF LP LSIPSV +PP+T+ Sbjct 539 LNIPAATTPANITVGAFSLPGLTLPSLNIPAATTPANITVSGFQLPPLSIPSVAIPPVTV 598 Query 571 PAGTALGAFNLPTLSIPSVTVPPITIPAGTTVGGFTLPTIHTPLISTPQISIGGFSTPGI 630 P T +GAFNLP L IP VT+P +TIPAG T+GGF+LP IHT I+ QI +G F P I Sbjct 599 PPIT-VGAFNLPPLQIPEVTIPQLTIPAGITIGGFSLPAIHTQPITVGQIGVGQFGLPSI 657 Query 631 ATQA--NSGVINLPTFSLNGITITNLVVFIPNNITALQTNMPGVFPQIGGFANTPPAFIN 688 ++ I +P F GI T QTN+P + P GG + Sbjct 658 GWDVFLSTPRITVPAF---GIPFT----------LQFQTNVPALQPPGGGLST------- 697 Query 689 TGTITVGGGQINGVGFSIGAINVTPFTLPNVVIQPWSLGGISVDGFTLPEISTQEFTTPA 748 F+ GA+ F LP +V+ P++L G Sbjct 698 ---------------FTNGALIFGEFDLPQLVVHPYTLTG-------------------- 722 Query 749 LTISPIGVGALSLPDITTQQFTTPELTIDPITLGGFTLPQLSIPAITTPAFTIDPIALGG 808 PI +G+ LP F P + + I + GFTLPQ++ PAITTP F I PI +GG Sbjct 723 ----PIVIGSFFLP-----AFNIPGIDVPAINVDGFTLPQITTPAITTPEFAIPPIGVGG 773 Query 809 FTLPQIMTPEITTPPFAI-------------------------DPIGLSGFTLPQVNIPE 843 FTLPQI T EI TP I DPI L+GFTLPQ+ P Sbjct 774 FTLPQITTQEIITPELTINSIGVGGFTLPQITTPPITTPPLTIDPINLTGFTLPQITTPP 833 Query 844 ITTPEFTIQPVGLAAFTTPALTIASIHLPSTTMGGFAIPAGPGYFNSSATPSLGFFNAGI 903 ITTP TI+P+G+ FTTP LT+ IHLPSTT+G FAIP GPGYFNSS PS GFFN+G Sbjct 834 ITTPPLTIEPIGVGGFTTPPLTVPGIHLPSTTIGAFAIPGGPGYFNSSTAPSSGFFNSGA 893 Query 904 GGNSGFGNSGSGLSGWFNTSPVGLLAGSGYQNYGGLISGFSNLGSGISGFANTGTLPFAV 963 GGNSGFGN+GSGLSGWFNT+P GLL GSGYQN+GGL SGFSNLGSG+SGFAN G LPF+V Sbjct 894 GGNSGFGNNGSGLSGWFNTNPAGLLGGSGYQNFGGLSSGFSNLGSGVSGFANRGILPFSV 953 Query 964 TSLVSGLANIGNNLSGLFFQSTT 986 S+VSG ANIG NL+G FFQ TT Sbjct 954 ASVVSGFANIGTNLAG-FFQGTT 975 >gi|31792941|ref|NP_855434.1| PPE family protein [Mycobacterium bovis AF2122/97] gi|31618532|emb|CAD94484.1| PPE FAMILY PROTEIN [Mycobacterium bovis AF2122/97] Length=1051 Score = 973 bits (2515), Expect = 0.0, Method: Compositional matrix adjust. Identities = 691/1089 (64%), Positives = 773/1089 (71%), Gaps = 142/1089 (13%) Query 1 MHYSVLPPEINSALIFAGAGSGPMLAAASAWDGLATELASAAVSFGSVTAGLVGGSWQGR 60 M++SVLPPEINSALIFAGAG PM AAA+AWDGLA ELASAA SFGSVT+GLVGG+WQG Sbjct 1 MNFSVLPPEINSALIFAGAGPEPMAAAATAWDGLAMELASAAASFGSVTSGLVGGAWQGA 60 Query 61 SSVAMAAAAAPYAGWLAAAATQAEQAATQAQVMVAEFEAVRLAMVQPALVAANRSGLISL 120 SS AMAAAAAPYA WLAAAA QAEQ A QA M+AEFEAV+ A+VQP LVAANR+ L+SL Sbjct 61 SSSAMAAAAAPYAAWLAAAAVQAEQTAAQAAAMIAEFEAVKTAVVQPMLVAANRADLVSL 120 Query 121 VISNLFGQNAPAIAAAEAAYEEMWALDVSAMAAYHSGASAVAVALPAFALPLR----LPA 176 V+SNLFGQNAPAIAA EA YE+MWA DVSAM+AYH+GASA+A AL F+ PL+ LPA Sbjct 121 VMSNLFGQNAPAIAAIEATYEQMWAADVSAMSAYHAGASAIASALSPFSKPLQNLAGLPA 180 Query 177 GLAAGPAAVVTALTTAVGMPTFAGRAIAASLGLANVGGGNLGNANNGLGNIGNANLGNNN 236 LA+G A A+T A G+P AG A +LG+ANVGGGN+GNANNGL NIGNANLGN N Sbjct 181 WLASG--APAAAMTAAAGIPALAGGPTAINLGIANVGGGNVGNANNGLANIGNANLGNYN 238 Query 237 LGSGNFGSFNIGSANLGGNNIGIGNAGANNFGLANLGNLNTGFANAGIGNFGIANTGNNN 296 GSGNFG+ NIGSA+LG NNIG GN G+NN G+ NLGNLNTGFAN G+GNFG NTGNNN Sbjct 239 FGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLGNLNTGFANTGLGNFGFGNTGNNN 298 Query 297 IGNGLTGNNQIGIGGLNSGNGNVGLFNAGSANIGFFNSGNGNFGIGNSGNFSTGLFNPGH 356 IG GLTGNNQIGIGGLNSG GN GLFN+GS N+GFFNSGNGNFGIGNSGNF+TG +N GH Sbjct 299 IGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGNFGIGNSGNFNTGGWNSGH 358 Query 357 GNTGFLNAGSFNTGMFDVGNANTGSFNVGHYNFGAFNPGPSNTGTFNTGGANTGWFNTGS 416 GNTGF NAGSFNTGM DVGNANTGS N G YN G FNPG SNTGTFNTG ANTG+ N G+ Sbjct 359 GNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSNTGTFNTGNANTGFLNAGN 418 Query 417 INTGAFNIGDMNNGLFNTGDMNNGVFYRGVGQGSLQFAITSPDLTLPSLEIPGISVPAFS 476 INTG FNIG MNNGLFNTGDMNNGVFYRGVGQGSLQF+IT+PDLTLP L+IPGISVPAFS Sbjct 419 INTGVFNIGHMNNGLFNTGDMNNGVFYRGVGQGSLQFSITTPDLTLPPLQIPGISVPAFS 478 Query 477 LPAITLPSLTIPAVTTPANVTVGAFDLPGLTVPSLTIPAAMTPANITVGAFDLPGLTVPS 536 LPAITLPSLTIPA TTPAN+TVGAF LPGLT+PSL IPAA TPANITVGAF LPGLT+PS Sbjct 479 LPAITLPSLTIPAATTPANITVGAFSLPGLTLPSLNIPAATTPANITVGAFSLPGLTLPS 538 Query 537 LTIPATTTPANITVGA--------------------------FNLPQLSIPSVTVPPITI 570 L IPA TTPANITVGA F LP LSIPSV +PP+T+ Sbjct 539 LNIPAATTPANITVGAFSLPGLTLPSLNIPAATTPANITVSGFQLPPLSIPSVAIPPVTV 598 Query 571 PAGTALGAFNLPTLSIPSVTVPPITIPAGTTVGGFTLPTIHTPLISTPQISIGGFSTPGI 630 P T +GAFNLP L IP VT+P +TIPAG T+GGF+LP IHT I+ QI +G F P I Sbjct 599 PPIT-VGAFNLPPLQIPEVTIPQLTIPAGITIGGFSLPAIHTQPITVGQIGVGQFGLPSI 657 Query 631 ATQA--NSGVINLPTFSLNGITITNLVVFIPNNITALQTNMPGVFPQIGGFANTPPAFIN 688 ++ I +P F GI T QTN+P + P GG + Sbjct 658 GWDVFLSTPRITVPAF---GIPFT----------LQFQTNVPALQPPGGGLST------- 697 Query 689 TGTITVGGGQINGVGFSIGAINVTPFTLPNVVIQPWSLGG-------------------- 728 F+ GA+ F LP +V+ P++L G Sbjct 698 ---------------FTNGALIFGEFDLPQLVVHPYTLTGPIVIGSFFLPAFNIPGIDVP 742 Query 729 -ISVDGFTLPEISTQEFTTPALTISPIGVGALSLPDITTQQFTTPELTI----------- 776 I+VDGFTLP+I+T TTP I PIGVG +LP ITTQ+ TPELTI Sbjct 743 AINVDGFTLPQITTPAITTPEFAIPPIGVGGFTLPQITTQEIITPELTINSIGVGGFTLP 802 Query 777 --------------DPITLGGFTLPQLSIPAITTPAFTIDPIALGGFTLPQIMTPEITTP 822 DPI L GFTLPQ++ P ITTP TIDPI L GFTLPQI TP ITTP Sbjct 803 QITTPPITTPPLTIDPINLTGFTLPQITTPPITTPPLTIDPINLTGFTLPQITTPPITTP 862 Query 823 PFAIDPIGLSGFTLPQVNIPEITTPEFTIQPVGLAAF----------------------- 859 P IDPI L+GFTLPQ+ P ITTP TI P+ L F Sbjct 863 PLTIDPINLTGFTLPQITTPPITTPPLTIDPINLTGFTLPQITTPPITTPPLTIEPIGVG 922 Query 860 --TTPALTIASIHLPSTTMGGFAIPAGPGYFNSSATPSLGFFNAGIGGNSGFGNSGSGLS 917 TTP LT+ IHLPSTT+G FAIP GPGYFNSS PS GFFN+G GGNSGFGN+GSGLS Sbjct 923 GFTTPPLTVPGIHLPSTTIGAFAIPGGPGYFNSSTAPSSGFFNSGAGGNSGFGNNGSGLS 982 Query 918 GWFNTSPVGLLAGSGYQNYGGLISGFSNLGSGISGFANTGTLPFAVTSLVSGLANIGNNL 977 GWFNT+P GLL GSGYQN+GGL SGFSNLGSG+SGFAN G LPF+V S+VSG ANIG NL Sbjct 983 GWFNTNPAGLLGGSGYQNFGGLSSGFSNLGSGVSGFANRGILPFSVASVVSGFANIGTNL 1042 Query 978 SGLFFQSTT 986 +G FFQ TT Sbjct 1043 AG-FFQGTT 1050 >gi|254231946|ref|ZP_04925273.1| PPE family protein [Mycobacterium tuberculosis C] gi|124601005|gb|EAY60015.1| PPE family protein [Mycobacterium tuberculosis C] Length=1078 Score = 970 bits (2507), Expect = 0.0, Method: Compositional matrix adjust. Identities = 690/1084 (64%), Positives = 787/1084 (73%), Gaps = 105/1084 (9%) Query 1 MHYSVLPPEINSALIFAGAGSGPMLAAASAWDGLATELASAAVSFGSVTAGLVGGSWQGR 60 M++SVLPPEINSALIFAGAG PM AAA+AWDGLA ELASAA SFGSVT+GLVGG+WQG Sbjct 1 MNFSVLPPEINSALIFAGAGPEPMAAAATAWDGLAMELASAAASFGSVTSGLVGGAWQGA 60 Query 61 SSVAMAAAAAPYAGWLAAAATQAEQAATQAQVMVAEFEAVRLAMVQPALVAANRSGLISL 120 SS AMAAAAAPYA WLAAAA QAEQ A QA M+AEFEAV+ A+VQP LVAANR+ L+SL Sbjct 61 SSSAMAAAAAPYAAWLAAAAVQAEQTAAQAAAMIAEFEAVKTAVVQPMLVAANRADLVSL 120 Query 121 VISNLFGQNAPAIAAAEAAYEEMWALDVSAMAAYHSGASAVAVALPAFALPLR----LPA 176 V+SNLFGQNAPAIAA EA YE+MWA DVSAM+AYH+GASA+A AL F+ PL+ LPA Sbjct 121 VMSNLFGQNAPAIAAIEATYEQMWAADVSAMSAYHAGASAIASALSPFSKPLQNLAGLPA 180 Query 177 GLAAGPAAVVTALTTAVGMPTFAGRAIAASLGLANVGGGNLGNANNGLGNIGNANLGNNN 236 LA+G A A+T A G+P AG A +LG+ANVGGGN+GNANNGL NIGNANLGN N Sbjct 181 WLASG--APAAAMTAAAGIPALAGGPTAINLGIANVGGGNVGNANNGLANIGNANLGNYN 238 Query 237 LGSGNFGSFNIGSANLGGNNIGIGNAGANNFGLANLGNLNTGFANAGIGNFGIANTGNNN 296 GSGNFG+ NIGSA+LG NNIG GN G+NN G+ NLGNLNTGFAN G+GNFG NTGNNN Sbjct 239 FGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLGNLNTGFANTGLGNFGFGNTGNNN 298 Query 297 IGNGLTGNNQIGIGGLNSGNGNVGLFNAGSANIGFFNSGNGNFGIGNSGNFSTGLFNPGH 356 IG GLTGNNQIGIGGLNSG GN GLFN+GS N+GFFNSGNGNFGIGNSGNF+TG +N GH Sbjct 299 IGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGNFGIGNSGNFNTGGWNSGH 358 Query 357 GNTGFLNAGSFNTGMFDVGNANTGSFNVGHYNFGAFNPGPSNTGTFNTGGANTGWFNTGS 416 GNTGF NAGSFNTGM DVGNANTGS N G YN G FNPG SNTGTFNTG ANTG+ N G+ Sbjct 359 GNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSNTGTFNTGNANTGFLNAGN 418 Query 417 INTGAFNIGDMNNGLFNTGDMNNGVFYRGVGQGSLQFAITSPDLTLPSLEIPGISVPAFS 476 INTG FNIG MNNGLFNTGDMNNGVFYRGVGQGSLQF+IT+PDLTLP L+IPGISVPAFS Sbjct 419 INTGVFNIGHMNNGLFNTGDMNNGVFYRGVGQGSLQFSITTPDLTLPPLQIPGISVPAFS 478 Query 477 LPAITLPSLTIPAVTTPANVTVGAFDLPGLTVPSLTIPAAMTPANITVGAFDLPGLTVPS 536 LPAITLPSL IPA TTPAN+TVGAF LPGLT+PSL IPAA TPANITVGAF LPGLT+PS Sbjct 479 LPAITLPSLNIPAATTPANITVGAFSLPGLTLPSLNIPAATTPANITVGAFSLPGLTLPS 538 Query 537 LTIPATTTPANITVGAFNLPQLSIPSVTVPPITIPAGTALGAFNLPTLSIPSVTVPPITI 596 L IPA TTPANITVGAF+LP L++PS+ +P T PA +GAF+LP L++PS+ +P T Sbjct 539 LNIPAATTPANITVGAFSLPGLTLPSLNIPAATTPANITVGAFSLPGLTLPSLNIPAATT 598 Query 597 PAGTTVGGF-----TLPTIHTPLISTP-QISIGGFSTPGIATQA-----------NSGVI 639 PA TVG F TLP+++ P +TP I++ GF P ++ + G Sbjct 599 PANITVGAFSLPGLTLPSLNIPAATTPANITVSGFQLPPLSIPSVAIPPVTVPPITVGAF 658 Query 640 NLPTFSLNGITITNLVVFIPNNITALQTNMPGV----------------FPQIGG--FAN 681 NLP + +TI L IP IT ++P + P IG F + Sbjct 659 NLPPLQIPEVTIPQLT--IPAGITIGGFSLPAIHTQPITVGQIGVGQFGLPSIGWDVFLS 716 Query 682 TP----PAF---------INTGTITVGGGQINGVGFSIGAINVTPFTLPNVVIQPWSLGG 728 TP PAF N + GG ++ F+ GA+ F LP +V+ P++L G Sbjct 717 TPRITVPAFGIPFTLQFQTNVPALQPPGGGLS--TFTNGALIFGEFDLPQLVVHPYTLTG 774 Query 729 ---------------------ISVDGFTLPEISTQEFTTPALTISPIGVGALSLPDITTQ 767 I+VDGFTLP+I+T TTP I PIGVG +LP ITTQ Sbjct 775 PIVIGSFFLPAFNIPGIDVPAINVDGFTLPQITTPAITTPEFAIPPIGVGGFTLPQITTQ 834 Query 768 QFTTPELTI-------------------------DPITLGGFTLPQLSIPAITTPAFTID 802 + TPELTI DPI L GFTLPQ++ P ITTP TID Sbjct 835 EIITPELTINSIGVGGFTLPQITTPPITTPPLTIDPINLTGFTLPQITTPPITTPPLTID 894 Query 803 PIALGGFTLPQIMTPEITTPPFAIDPIGLSGFTLPQVNIPEITTPEFTIQPVGLAAFTTP 862 PI L GFTLPQI TP ITTPP IDPI L+GFTLPQ+ P ITTP TI+P+G+ FTTP Sbjct 895 PINLTGFTLPQITTPPITTPPLTIDPINLTGFTLPQITTPPITTPPLTIEPIGVGGFTTP 954 Query 863 ALTIASIHLPSTTMGGFAIPAGPGYFNSSATPSLGFFNAGIGGNSGFGNSGSGLSGWFNT 922 LT+ IHLPSTT+G FAIP GPGYFNSS PS GFFN+G GGNSGFGN+GSGLSGWFNT Sbjct 955 PLTVPGIHLPSTTIGAFAIPGGPGYFNSSTAPSSGFFNSGAGGNSGFGNNGSGLSGWFNT 1014 Query 923 SPVGLLAGSGYQNYGGLISGFSNLGSGISGFANTGTLPFAVTSLVSGLANIGNNLSGLFF 982 +P GLL GSGYQN+GGL SGFSNLGSG+SGFAN G LPF+V S+VSG ANIG NL+G FF Sbjct 1015 NPAGLLGGSGYQNFGGLSSGFSNLGSGVSGFANRGILPFSVASVVSGFANIGTNLAG-FF 1073 Query 983 QSTT 986 Q TT Sbjct 1074 QGTT 1077 >gi|254364588|ref|ZP_04980634.1| PPE family protein [Mycobacterium tuberculosis str. Haarlem] gi|134150102|gb|EBA42147.1| PPE family protein [Mycobacterium tuberculosis str. Haarlem] Length=1050 Score = 958 bits (2476), Expect = 0.0, Method: Compositional matrix adjust. Identities = 693/1066 (66%), Positives = 780/1066 (74%), Gaps = 97/1066 (9%) Query 1 MHYSVLPPEINSALIFAGAGSGPMLAAASAWDGLATELASAAVSFGSVTAGLVGGSWQGR 60 M++SVLPPEINSALIFAGAG PM AAA+AWDGLA ELASAA SFGSVT+GLVGG+WQG Sbjct 1 MNFSVLPPEINSALIFAGAGPEPMAAAATAWDGLAMELASAAASFGSVTSGLVGGAWQGA 60 Query 61 SSVAMAAAAAPYAGWLAAAATQAEQAATQAQVMVAEFEAVRLAMVQPALVAANRSGLISL 120 SS AMAAAAAPYA WLAAAA QAEQ A QA M+AEFEAV+ A+VQP LVAANR+ L+SL Sbjct 61 SSSAMAAAAAPYAAWLAAAAVQAEQTAAQAAAMIAEFEAVKTAVVQPMLVAANRADLVSL 120 Query 121 VISNLFGQNAPAIAAAEAAYEEMWALDVSAMAAYHSGASAVAVALPAFALPLR----LPA 176 V+SNLFGQNAPAIAA EA YE+MWA DVSAM+AYH+GASA+A AL F+ PL+ LPA Sbjct 121 VMSNLFGQNAPAIAAIEATYEQMWAADVSAMSAYHAGASAIASALSPFSKPLQNLAGLPA 180 Query 177 GLAAGPAAVVTALTTAVGMPTFAGRAIAASLGLANVGGGNLGNANNGLGNIGNANLGNNN 236 LA+G A A+T A G+P AG A +LG+ANVGGGN+GNANNGL NIGNANLGN N Sbjct 181 WLASG--APAAAMTAAAGIPALAGGPTAINLGIANVGGGNVGNANNGLANIGNANLGNYN 238 Query 237 LGSGNFGSFNIGSANLGGNNIGIGNAGANNFGLANLGNLNTGFANAGIGNFGIANTGNNN 296 GSGNFG+ NIGSA+LG NNIG GN G+NN G+ NLGNLNTGFAN G+GNFG NTGNNN Sbjct 239 FGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLGNLNTGFANTGLGNFGFGNTGNNN 298 Query 297 IGNGLTGNNQIGIGGLNSGNGNVGLFNAGSANIGFFNSGNGNFGIGNSGNFSTGLFNPGH 356 IG GLTGNNQIGIGGLNSG GN GLFN+GS N+GFFNSGNGNFGIGNSGNF+TG +N GH Sbjct 299 IGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGNFGIGNSGNFNTGGWNSGH 358 Query 357 GNTGFLNAGSFNTGMFDVGNANTGSFNVGHYNFGAFNPGPSNTGTFNTGGANTGWFNTGS 416 GNTGF NAGSFNTGM DVGNANTGS N G YN G FNPG SNTGTFNTG ANTG+ N G+ Sbjct 359 GNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSNTGTFNTGNANTGFLNAGN 418 Query 417 INTGAFNIGDMNNGLFNTGDMNNGVFYRGVGQGSLQFAITSPDLTLPSLEIPGISVPAFS 476 INTG FNIG MNNGLFNTGDMNNGVFYRGVGQGSLQF+IT+PDLTLP L+IPGISVPAFS Sbjct 419 INTGVFNIGHMNNGLFNTGDMNNGVFYRGVGQGSLQFSITTPDLTLPPLQIPGISVPAFS 478 Query 477 LPAITLPSLTIPAVTTPANVTVGAFDLPGLTVPSLTIPAAMTPANITVGAFDLPGLTVPS 536 LPAITLPSLTIPA TTPAN+TVGAF LPGLT+PSL IPAA TPANITVGAF LPGLT+PS Sbjct 479 LPAITLPSLTIPAATTPANITVGAFSLPGLTLPSLNIPAATTPANITVGAFSLPGLTLPS 538 Query 537 LTIPATTTPANITVGAFNLPQLSIPSVTVPPITIPAGTALGAFNLPTLSIPSVTVPPITI 596 L IPA TTPANITV F LP LSIPSV +PP+T+P T +GAFNLP L IP VT+P +TI Sbjct 539 LNIPAATTPANITVSGFQLPPLSIPSVAIPPVTVPPIT-VGAFNLPPLQIPEVTIPQLTI 597 Query 597 PAGTTVGGFTLPTIHTPLISTPQISIGGFSTPGIATQA--NSGVINLPTFSLNGITITNL 654 PAG T+GGF+LP IHT I+ QI +G F P I ++ I +P F GI T Sbjct 598 PAGITIGGFSLPAIHTQPITVGQIGVGQFGLPSIGWDVFLSTPRITVPAF---GIPFT-- 652 Query 655 VVFIPNNITALQTNMPGVFPQIGGFA------------NTPPAFIN----TGTITVGG-- 696 QTN+P + P GG + + P ++ TG I +G Sbjct 653 --------LQFQTNVPALQPPGGGLSTFTNGALIFGEFDLPQLVVHPYTLTGPIVIGSFF 704 Query 697 -GQINGVGFSIGAINVTPFTLPNV----VIQP-WSLGGISVDGFTLPEISTQEFTTPALT 750 N G + AINV FTLP + + P +++ I V GFTLP+I+TQE TP LT Sbjct 705 LPAFNIPGIDVPAINVDGFTLPQITTPAITTPEFAIPPIGVGGFTLPQITTQEIITPELT 764 Query 751 I--------------------------------------------------SPIGVGALS 760 I PI + + Sbjct 765 INSIGVGGFTLPQITTPPITTPPLTIDPINLTGFTLPQITTPPITTPPLTIDPINLTGFT 824 Query 761 LPDITTQQFTTPELTIDPITLGGFTLPQLSIPAITTPAFTIDPIALGGFTLPQIMTPEIT 820 LP ITT TTP LTIDPI L GFTLPQ++ P ITTP TIDPI L GFTLPQI TP IT Sbjct 825 LPQITTPPITTPPLTIDPINLTGFTLPQITTPPITTPPLTIDPINLTGFTLPQITTPPIT 884 Query 821 TPPFAIDPIGLSGFTLPQVNIPEITTPEFTIQPVGLAAFTTPALTIASIHLPSTTMGGFA 880 TPP IDPI L+GFTLPQ+ P ITTP TI+P+G+ FTTP LT+ IHLPSTT+G FA Sbjct 885 TPPLTIDPINLTGFTLPQITTPPITTPPLTIEPIGVGGFTTPPLTVPGIHLPSTTIGAFA 944 Query 881 IPAGPGYFNSSATPSLGFFNAGIGGNSGFGNSGSGLSGWFNTSPVGLLAGSGYQNYGGLI 940 IP GPGYFNSS PS GFFN+G GGNSGFGN+GSGLSGWFNT+P GLL GSGYQN+GGL Sbjct 945 IPGGPGYFNSSTAPSSGFFNSGAGGNSGFGNNGSGLSGWFNTNPAGLLGGSGYQNFGGLS 1004 Query 941 SGFSNLGSGISGFANTGTLPFAVTSLVSGLANIGNNLSGLFFQSTT 986 SGFSNLGSG+SGFAN G LPF+V S+VSG ANIG NL+G FFQ TT Sbjct 1005 SGFSNLGSGVSGFANRGILPFSVASVVSGFANIGTNLAG-FFQGTT 1049 >gi|326903369|gb|EGE50302.1| PPE family protein [Mycobacterium tuberculosis W-148] Length=1129 Score = 953 bits (2464), Expect = 0.0, Method: Compositional matrix adjust. Identities = 697/1135 (62%), Positives = 790/1135 (70%), Gaps = 156/1135 (13%) Query 1 MHYSVLPPEINSALIFAGAGSGPMLAAASAWDGLATELASAAVSFGSVTAGLVGGSWQGR 60 M++SVLPPEINSALIFAGAG PM AAA+AWDGLA ELASAA SFGSVT+GLVGG+WQG Sbjct 1 MNFSVLPPEINSALIFAGAGPEPMAAAATAWDGLAMELASAAASFGSVTSGLVGGAWQGA 60 Query 61 SSVAMAAAAAPYAGWLAAAATQAEQAATQAQVMVAEFEAVRLAMVQPALVAANRSGLISL 120 SS AMAAAAAPYA WLAAAA QAEQ A QA M+AEFEAV+ A+VQP LVAANR+ L+SL Sbjct 61 SSSAMAAAAAPYAAWLAAAAVQAEQTAAQAAAMIAEFEAVKTAVVQPMLVAANRADLVSL 120 Query 121 VISNLFGQNAPAIAAAEAAYEEMWALDVSAMAAYHSGASAVAVALPAFALPLR----LPA 176 V+SNLFGQNAPAIAA EA YE+MWA DVSAM+AYH+GASA+A AL F+ PL+ LPA Sbjct 121 VMSNLFGQNAPAIAAIEATYEQMWAADVSAMSAYHAGASAIASALSPFSKPLQNLAGLPA 180 Query 177 GLAAGPAAVVTALTTAVGMPTFAGRAIAASLGLANVGGGNLGNANNGLGNIGNANLGNNN 236 LA+G A A+T A G+P AG A +LG+ANVGGGN+GNANNGL NIGNANLGN N Sbjct 181 WLASG--APAAAMTAAAGIPALAGGPTAINLGIANVGGGNVGNANNGLANIGNANLGNYN 238 Query 237 LGSGNFGSFNIGSANLGGNNIGIGNAGANNFGLANLGNLNTGFANAGIGNFGIANTGNNN 296 GSGNFG+ NIGSA+LG NNIG GN G+NN G+ NLGNLNTGFAN G+GNFG NTGNNN Sbjct 239 FGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLGNLNTGFANTGLGNFGFGNTGNNN 298 Query 297 IGNGLTGNNQIGIGGLNSGNGNVGLFNAGSANIGFFNSGNGNFGIGNSGNFSTGLFNPGH 356 IG GLTGNNQIGIGGLNSG GN GLFN+GS N+GFFNSGNGNFGIGNSGNF+TG +N GH Sbjct 299 IGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGNFGIGNSGNFNTGGWNSGH 358 Query 357 GNTGFLNAGSFNTGMFDVGNANTGSFNVGHYNFGAFNPGPSNTGTFNTGGANTGWFNTGS 416 GNTGF NAGSFNTGM DVGNANTGS N G YN G FNPG SNTGTFNTG ANTG+ N G+ Sbjct 359 GNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSNTGTFNTGNANTGFLNAGN 418 Query 417 INTGAFNIGDMNNGLFNTGDMNNGVFYRGVGQGSLQFAITSPDLTLPSLEIPGISVPAFS 476 INTG FNIG MNNGLFNTGDMNNGVFYRGVGQGSLQF+IT+PDLTLP L+IPGISVPAFS Sbjct 419 INTGVFNIGHMNNGLFNTGDMNNGVFYRGVGQGSLQFSITTPDLTLPPLQIPGISVPAFS 478 Query 477 LPAITLPSLTIPAVTTPANVTVGAFDLPGLTVPSLTIPAAMTPANITVGAFDLPGLTVPS 536 LPAITLPSLTIPA TTPAN+TVGAF LPGLT+PSLTIPAA TPANITVGAF LPGLT+PS Sbjct 479 LPAITLPSLTIPAATTPANITVGAFSLPGLTLPSLTIPAATTPANITVGAFSLPGLTLPS 538 Query 537 LTIPATTTPANITVGAFNLPQLSIPSVTVPPITIPAGTALGAFNLPTLSIPSVTVPPITI 596 L IPA TTPANITVGAF+LP L++PS+ +P T PA +GAF+LP L++PS+ +P T Sbjct 539 LNIPAATTPANITVGAFSLPGLTLPSLNIPAATTPANITVGAFSLPGLTLPSLNIPAATT 598 Query 597 PAGTTVGGF-----TLPTIHTPLISTP-QISIGGFSTPGI----------ATQAN----- 635 PA TVG F TLP+++ P +TP I++G FS PG+ T AN Sbjct 599 PANITVGAFSLPGLTLPSLNIPAATTPANITVGAFSLPGLTLPSLNIPAATTPANITVSG 658 Query 636 ----------------------SGVINLPTFSLNGITITNLVVFIPNNITALQTNMPGV- 672 G NLP + +TI L IP IT ++P + Sbjct 659 FQLPPLSIPSVAIPPVTVPPITVGAFNLPPLQIPEVTIPQLT--IPAGITIGGFSLPAIH 716 Query 673 ---------------FPQIGG--FANTP----PAF---------INTGTITVGGGQINGV 702 P IG F +TP PAF N + GG ++ Sbjct 717 TQPITVGQIGVGQFGLPSIGWDVFLSTPRITVPAFGIPFTLQFQTNVPALQPPGGGLS-- 774 Query 703 GFSIGAINVTPFTLPNVVIQPWSLGG---------------------ISVDGFTLPEIST 741 F+ GA+ F LP +V+ P++L G I+VDGFTLP+I+T Sbjct 775 TFTNGALIFGEFDLPQLVVHPYTLTGPIVIGSFFLPAFNIPGIDVPAINVDGFTLPQITT 834 Query 742 QEFTTPALTISPIGVGALSLPDITTQQFTTPELTI------------------------- 776 TTP I PIGVG +LP ITTQ+ TPELTI Sbjct 835 PAITTPEFAIPPIGVGGFTLPQITTQEIITPELTINSIGVGGFTLPQITTPPITTPPLTI 894 Query 777 DPITLGGFTLPQLSIPAITTPAFTIDPIALGGFTLPQIMTPEITTPPFAIDPIGLSGFTL 836 DPI L GFTLPQ++ P ITTP TIDPI L GFTLPQI TP ITTPP IDPI L+GFTL Sbjct 895 DPINLTGFTLPQITTPPITTPPLTIDPINLTGFTLPQITTPPITTPPLTIDPINLTGFTL 954 Query 837 PQVNIPEITTPEFTIQPVGLAAF-------------------------TTPALTIASIHL 871 PQ+ P ITTP TI P+ L F TTP LT+ IHL Sbjct 955 PQITTPPITTPPLTIDPINLTGFHPPPNHHPTHHHPTATIEPIGVGGFTTPPLTVPGIHL 1014 Query 872 PSTTMGGFAIPAGPGYFNSSATPSLGFFNAGIGGNSGFGNSGSGLSGWFNTSPVGLLAGS 931 PSTT+G FAIP GPGYFNSS PS GFFN+G GGNSGFGN+GSGLSGWFNT+P GLL GS Sbjct 1015 PSTTIGAFAIPGGPGYFNSSTAPSSGFFNSGAGGNSGFGNNGSGLSGWFNTNPAGLLGGS 1074 Query 932 GYQNYGGLISGFSNLGSGISGFANTGTLPFAVTSLVSGLANIGNNLSGLFFQSTT 986 GYQN+GGL SGFSNLGSG+SGFAN G LPF+V S+VSG ANIG NL+G FFQ TT Sbjct 1075 GYQNFGGLSSGFSNLGSGVSGFANRGILPFSVASVVSGFANIGTNLAG-FFQGTT 1128 >gi|31793110|ref|NP_855603.1| PPE family protein [Mycobacterium bovis AF2122/97] gi|31618701|emb|CAD94655.1| PPE FAMILY PROTEIN [Mycobacterium bovis AF2122/97] Length=625 Score = 909 bits (2348), Expect = 0.0, Method: Compositional matrix adjust. Identities = 599/599 (100%), Positives = 599/599 (100%), Gaps = 0/599 (0%) Query 1 MHYSVLPPEINSALIFAGAGSGPMLAAASAWDGLATELASAAVSFGSVTAGLVGGSWQGR 60 MHYSVLPPEINSALIFAGAGSGPMLAAASAWDGLATELASAAVSFGSVTAGLVGGSWQGR Sbjct 1 MHYSVLPPEINSALIFAGAGSGPMLAAASAWDGLATELASAAVSFGSVTAGLVGGSWQGR 60 Query 61 SSVAMAAAAAPYAGWLAAAATQAEQAATQAQVMVAEFEAVRLAMVQPALVAANRSGLISL 120 SSVAMAAAAAPYAGWLAAAATQAEQAATQAQVMVAEFEAVRLAMVQPALVAANRSGLISL Sbjct 61 SSVAMAAAAAPYAGWLAAAATQAEQAATQAQVMVAEFEAVRLAMVQPALVAANRSGLISL 120 Query 121 VISNLFGQNAPAIAAAEAAYEEMWALDVSAMAAYHSGASAVAVALPAFALPLRLPAGLAA 180 VISNLFGQNAPAIAAAEAAYEEMWALDVSAMAAYHSGASAVAVALPAFALPLRLPAGLAA Sbjct 121 VISNLFGQNAPAIAAAEAAYEEMWALDVSAMAAYHSGASAVAVALPAFALPLRLPAGLAA 180 Query 181 GPAAVVTALTTAVGMPTFAGRAIAASLGLANVGGGNLGNANNGLGNIGNANLGNNNLGSG 240 GPAAVVTALTTAVGMPTFAGRAIAASLGLANVGGGNLGNANNGLGNIGNANLGNNNLGSG Sbjct 181 GPAAVVTALTTAVGMPTFAGRAIAASLGLANVGGGNLGNANNGLGNIGNANLGNNNLGSG 240 Query 241 NFGSFNIGSANLGGNNIGIGNAGANNFGLANLGNLNTGFANAGIGNFGIANTGNNNIGNG 300 NFGSFNIGSANLGGNNIGIGNAGANNFGLANLGNLNTGFANAGIGNFGIANTGNNNIGNG Sbjct 241 NFGSFNIGSANLGGNNIGIGNAGANNFGLANLGNLNTGFANAGIGNFGIANTGNNNIGNG 300 Query 301 LTGNNQIGIGGLNSGNGNVGLFNAGSANIGFFNSGNGNFGIGNSGNFSTGLFNPGHGNTG 360 LTGNNQIGIGGLNSGNGNVGLFNAGSANIGFFNSGNGNFGIGNSGNFSTGLFNPGHGNTG Sbjct 301 LTGNNQIGIGGLNSGNGNVGLFNAGSANIGFFNSGNGNFGIGNSGNFSTGLFNPGHGNTG 360 Query 361 FLNAGSFNTGMFDVGNANTGSFNVGHYNFGAFNPGPSNTGTFNTGGANTGWFNTGSINTG 420 FLNAGSFNTGMFDVGNANTGSFNVGHYNFGAFNPGPSNTGTFNTGGANTGWFNTGSINTG Sbjct 361 FLNAGSFNTGMFDVGNANTGSFNVGHYNFGAFNPGPSNTGTFNTGGANTGWFNTGSINTG 420 Query 421 AFNIGDMNNGLFNTGDMNNGVFYRGVGQGSLQFAITSPDLTLPSLEIPGISVPAFSLPAI 480 AFNIGDMNNGLFNTGDMNNGVFYRGVGQGSLQFAITSPDLTLPSLEIPGISVPAFSLPAI Sbjct 421 AFNIGDMNNGLFNTGDMNNGVFYRGVGQGSLQFAITSPDLTLPSLEIPGISVPAFSLPAI 480 Query 481 TLPSLTIPAVTTPANVTVGAFDLPGLTVPSLTIPAAMTPANITVGAFDLPGLTVPSLTIP 540 TLPSLTIPAVTTPANVTVGAFDLPGLTVPSLTIPAAMTPANITVGAFDLPGLTVPSLTIP Sbjct 481 TLPSLTIPAVTTPANVTVGAFDLPGLTVPSLTIPAAMTPANITVGAFDLPGLTVPSLTIP 540 Query 541 ATTTPANITVGAFNLPQLSIPSVTVPPITIPAGTALGAFNLPTLSIPSVTVPPITIPAG 599 ATTTPANITVGAFNLPQLSIPSVTVPPITIPAGTALGAFNLPTLSIPSVTVPPITIPAG Sbjct 541 ATTTPANITVGAFNLPQLSIPSVTVPPITIPAGTALGAFNLPTLSIPSVTVPPITIPAG 599 Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 69/187 (37%), Positives = 96/187 (52%), Gaps = 22/187 (11%) Query 686 FINTGTITVGG---GQINGVGFSIGAINVTPF-------------TLPNVVIQPWSLGGI 729 + NTG+I G G +N F+ G +N F T P++ + + GI Sbjct 411 WFNTGSINTGAFNIGDMNNGLFNTGDMNNGVFYRGVGQGSLQFAITSPDLTLPSLEIPGI 470 Query 730 SVDGFTLPEISTQEFTTPALTI-SPIGVGALSLPDITTQQFTTPE-LTIDPITLGGFTLP 787 SV F+LP I+ T PA+T + + VGA LP +T T P +T IT+G F LP Sbjct 471 SVPAFSLPAITLPSLTIPAVTTPANVTVGAFDLPGLTVPSLTIPAAMTPANITVGAFDLP 530 Query 788 QLSIPAITTPAFTIDP-IALGGFTLPQIMTPEITTPPFAIDPIG--LSGFTLPQVNIPEI 844 L++P++T PA T I +G F LPQ+ P +T PP I P G L F LP ++IP + Sbjct 531 GLTVPSLTIPATTTPANITVGAFNLPQLSIPSVTVPPITI-PAGTALGAFNLPTLSIPSV 589 Query 845 TTPEFTI 851 T P TI Sbjct 590 TVPPITI 596 Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 61/151 (41%), Positives = 81/151 (54%), Gaps = 11/151 (7%) Query 739 ISTQEFTTPALTISPIGVGALSLPDITTQQFTTPELTIDP-ITLGGFTLPQLSIPAITTP 797 I++ + T P+L I I V A SLP IT T P +T +T+G F LP L++P++T P Sbjct 455 ITSPDLTLPSLEIPGISVPAFSLPAITLPSLTIPAVTTPANVTVGAFDLPGLTVPSLTIP 514 Query 798 A-FTIDPIALGGFTLPQIMTPEITTPPFAIDP-IGLSGFTLPQVNIPEITTPEFTIQPVG 855 A T I +G F LP + P +T P I + F LPQ++IP +T P TI P G Sbjct 515 AAMTPANITVGAFDLPGLTVPSLTIPATTTPANITVGAFNLPQLSIPSVTVPPITI-PAG 573 Query 856 --LAAFTTPALTIASIHLPSTTMGGFAIPAG 884 L AF P L+I PS T+ IPAG Sbjct 574 TALGAFNLPTLSI-----PSVTVPPITIPAG 599 Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 44/129 (35%), Positives = 68/129 (53%), Gaps = 4/129 (3%) Query 758 ALSLPDITTQQFTTPELTIDPITLGGFTLPQLSIPAITTPA-FTIDPIALGGFTLPQIMT 816 A++ PD+T P +++ +L TLP L+IPA+TTPA T+ L G T+P + Sbjct 454 AITSPDLTLPSLEIPGISVPAFSLPAITLPSLTIPAVTTPANVTVGAFDLPGLTVPSLTI 513 Query 817 PEITTPP-FAIDPIGLSGFTLPQVNIPEITTP-EFTIQPVGLAAFTTPALTIASIHLPS- 873 P TP + L G T+P + IP TTP T+ L + P++T+ I +P+ Sbjct 514 PAAMTPANITVGAFDLPGLTVPSLTIPATTTPANITVGAFNLPQLSIPSVTVPPITIPAG 573 Query 874 TTMGGFAIP 882 T +G F +P Sbjct 574 TALGAFNLP 582 >gi|121637823|ref|YP_978046.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224990307|ref|YP_002644994.1| PPE family protein [Mycobacterium bovis BCG str. Tokyo 172] gi|121493470|emb|CAL71944.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224773420|dbj|BAH26226.1| PPE family protein [Mycobacterium bovis BCG str. Tokyo 172] gi|341601850|emb|CCC64524.1| PPE family protein [Mycobacterium bovis BCG str. Moreau RDJ] Length=625 Score = 906 bits (2342), Expect = 0.0, Method: Compositional matrix adjust. Identities = 598/599 (99%), Positives = 598/599 (99%), Gaps = 0/599 (0%) Query 1 MHYSVLPPEINSALIFAGAGSGPMLAAASAWDGLATELASAAVSFGSVTAGLVGGSWQGR 60 MHYSVLPPEINSALIFAGAGSGPMLAAASAWDGLATELASAAVSFGSVTAGLVGGSWQGR Sbjct 1 MHYSVLPPEINSALIFAGAGSGPMLAAASAWDGLATELASAAVSFGSVTAGLVGGSWQGR 60 Query 61 SSVAMAAAAAPYAGWLAAAATQAEQAATQAQVMVAEFEAVRLAMVQPALVAANRSGLISL 120 SSVAMAAAAAPYAGWLAAAATQAEQAATQAQVMVAEFEAVRLAMVQPALVAANRSGLISL Sbjct 61 SSVAMAAAAAPYAGWLAAAATQAEQAATQAQVMVAEFEAVRLAMVQPALVAANRSGLISL 120 Query 121 VISNLFGQNAPAIAAAEAAYEEMWALDVSAMAAYHSGASAVAVALPAFALPLRLPAGLAA 180 VISNLFGQNAPAIAAAEAAYEEMWALDVSAMAAYHSGASAVAVALPAFALPLRLPAGLAA Sbjct 121 VISNLFGQNAPAIAAAEAAYEEMWALDVSAMAAYHSGASAVAVALPAFALPLRLPAGLAA 180 Query 181 GPAAVVTALTTAVGMPTFAGRAIAASLGLANVGGGNLGNANNGLGNIGNANLGNNNLGSG 240 GPAAVVTALTTAVGMPTFAGRAIAASLGLANVGGGNLGNANNGLGNIGNANLGNNNLGSG Sbjct 181 GPAAVVTALTTAVGMPTFAGRAIAASLGLANVGGGNLGNANNGLGNIGNANLGNNNLGSG 240 Query 241 NFGSFNIGSANLGGNNIGIGNAGANNFGLANLGNLNTGFANAGIGNFGIANTGNNNIGNG 300 NFGSFNIGSANLGGNNIGIGNAGANNFGLANLGNLNTGFANAGIGNFGIANTGNNNIGNG Sbjct 241 NFGSFNIGSANLGGNNIGIGNAGANNFGLANLGNLNTGFANAGIGNFGIANTGNNNIGNG 300 Query 301 LTGNNQIGIGGLNSGNGNVGLFNAGSANIGFFNSGNGNFGIGNSGNFSTGLFNPGHGNTG 360 LTGNNQIGIGGLNSGNGNVGLFNAGSANIGFFNSGNGNFGIGNSGNFSTGLFNPGHGNTG Sbjct 301 LTGNNQIGIGGLNSGNGNVGLFNAGSANIGFFNSGNGNFGIGNSGNFSTGLFNPGHGNTG 360 Query 361 FLNAGSFNTGMFDVGNANTGSFNVGHYNFGAFNPGPSNTGTFNTGGANTGWFNTGSINTG 420 FLNAGSFNTGMFDVGNANTGSFNVGHYNFGAFNPGPSNTGTFNTGGANTGWFNTGSINTG Sbjct 361 FLNAGSFNTGMFDVGNANTGSFNVGHYNFGAFNPGPSNTGTFNTGGANTGWFNTGSINTG 420 Query 421 AFNIGDMNNGLFNTGDMNNGVFYRGVGQGSLQFAITSPDLTLPSLEIPGISVPAFSLPAI 480 AFNIGDMNNGLFNTGDMNNGVFYRGVGQGSLQFAITSPDLTLPSLEIPGISVPAFSLPAI Sbjct 421 AFNIGDMNNGLFNTGDMNNGVFYRGVGQGSLQFAITSPDLTLPSLEIPGISVPAFSLPAI 480 Query 481 TLPSLTIPAVTTPANVTVGAFDLPGLTVPSLTIPAAMTPANITVGAFDLPGLTVPSLTIP 540 TLPSLTIPAVTTPANVTVGAFDLPGLTVPSLTIPAAMTPANITVGAFDLPGLTVPSLTIP Sbjct 481 TLPSLTIPAVTTPANVTVGAFDLPGLTVPSLTIPAAMTPANITVGAFDLPGLTVPSLTIP 540 Query 541 ATTTPANITVGAFNLPQLSIPSVTVPPITIPAGTALGAFNLPTLSIPSVTVPPITIPAG 599 ATTTPANITVGAFNLPQLSIPSVT PPITIPAGTALGAFNLPTLSIPSVTVPPITIPAG Sbjct 541 ATTTPANITVGAFNLPQLSIPSVTFPPITIPAGTALGAFNLPTLSIPSVTVPPITIPAG 599 Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 69/187 (37%), Positives = 96/187 (52%), Gaps = 22/187 (11%) Query 686 FINTGTITVGG---GQINGVGFSIGAINVTPF-------------TLPNVVIQPWSLGGI 729 + NTG+I G G +N F+ G +N F T P++ + + GI Sbjct 411 WFNTGSINTGAFNIGDMNNGLFNTGDMNNGVFYRGVGQGSLQFAITSPDLTLPSLEIPGI 470 Query 730 SVDGFTLPEISTQEFTTPALTI-SPIGVGALSLPDITTQQFTTPE-LTIDPITLGGFTLP 787 SV F+LP I+ T PA+T + + VGA LP +T T P +T IT+G F LP Sbjct 471 SVPAFSLPAITLPSLTIPAVTTPANVTVGAFDLPGLTVPSLTIPAAMTPANITVGAFDLP 530 Query 788 QLSIPAITTPAFTIDP-IALGGFTLPQIMTPEITTPPFAIDPIG--LSGFTLPQVNIPEI 844 L++P++T PA T I +G F LPQ+ P +T PP I P G L F LP ++IP + Sbjct 531 GLTVPSLTIPATTTPANITVGAFNLPQLSIPSVTFPPITI-PAGTALGAFNLPTLSIPSV 589 Query 845 TTPEFTI 851 T P TI Sbjct 590 TVPPITI 596 Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 61/151 (41%), Positives = 81/151 (54%), Gaps = 11/151 (7%) Query 739 ISTQEFTTPALTISPIGVGALSLPDITTQQFTTPELTIDP-ITLGGFTLPQLSIPAITTP 797 I++ + T P+L I I V A SLP IT T P +T +T+G F LP L++P++T P Sbjct 455 ITSPDLTLPSLEIPGISVPAFSLPAITLPSLTIPAVTTPANVTVGAFDLPGLTVPSLTIP 514 Query 798 A-FTIDPIALGGFTLPQIMTPEITTPPFAIDP-IGLSGFTLPQVNIPEITTPEFTIQPVG 855 A T I +G F LP + P +T P I + F LPQ++IP +T P TI P G Sbjct 515 AAMTPANITVGAFDLPGLTVPSLTIPATTTPANITVGAFNLPQLSIPSVTFPPITI-PAG 573 Query 856 --LAAFTTPALTIASIHLPSTTMGGFAIPAG 884 L AF P L+I PS T+ IPAG Sbjct 574 TALGAFNLPTLSI-----PSVTVPPITIPAG 599 Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 44/129 (35%), Positives = 67/129 (52%), Gaps = 4/129 (3%) Query 758 ALSLPDITTQQFTTPELTIDPITLGGFTLPQLSIPAITTPA-FTIDPIALGGFTLPQIMT 816 A++ PD+T P +++ +L TLP L+IPA+TTPA T+ L G T+P + Sbjct 454 AITSPDLTLPSLEIPGISVPAFSLPAITLPSLTIPAVTTPANVTVGAFDLPGLTVPSLTI 513 Query 817 PEITTPP-FAIDPIGLSGFTLPQVNIPEITTP-EFTIQPVGLAAFTTPALTIASIHLPS- 873 P TP + L G T+P + IP TTP T+ L + P++T I +P+ Sbjct 514 PAAMTPANITVGAFDLPGLTVPSLTIPATTTPANITVGAFNLPQLSIPSVTFPPITIPAG 573 Query 874 TTMGGFAIP 882 T +G F +P Sbjct 574 TALGAFNLP 582 >gi|289757864|ref|ZP_06517242.1| predicted protein [Mycobacterium tuberculosis T85] gi|289713428|gb|EFD77440.1| predicted protein [Mycobacterium tuberculosis T85] Length=979 Score = 852 bits (2201), Expect = 0.0, Method: Compositional matrix adjust. Identities = 592/913 (65%), Positives = 666/913 (73%), Gaps = 91/913 (9%) Query 1 MHYSVLPPEINSALIFAGAGSGPMLAAASAWDGLATELASAAVSFGSVTAGLVGGSWQGR 60 M++SVLPPEINSALIFAGAG PM AAA+AWDGLA ELASAA SFGSVT+GLVGG+WQG Sbjct 1 MNFSVLPPEINSALIFAGAGPEPMAAAATAWDGLAMELASAAASFGSVTSGLVGGAWQGA 60 Query 61 SSVAMAAAAAPYAGWLAAAATQAEQAATQAQVMVAEFEAVRLAMVQPALVAANRSGLISL 120 SS AMAAAAAPYA WLAAAA QAEQ A QA M+AEFEAV+ A+VQP LVAANR+ L+SL Sbjct 61 SSSAMAAAAAPYAAWLAAAAVQAEQTAAQAAAMIAEFEAVKTAVVQPMLVAANRADLVSL 120 Query 121 VISNLFGQNAPAIAAAEAAYEEMWALDVSAMAAYHSGASAVAVALPAFALPLR----LPA 176 V+SNLFGQNAPAIAA EA YE+MWA DVSAM+AYH+GASA+A AL F+ PL+ LPA Sbjct 121 VMSNLFGQNAPAIAAIEATYEQMWAADVSAMSAYHAGASAIASALSPFSKPLQNLAGLPA 180 Query 177 GLAAGPAAVVTALTTAVGMPTFAGRAIAASLGLANVGGGNLGNANNGLGNIGNANLGNNN 236 LA+G A A+T A G+P AG A +LG+ANVGGGN+GNANNGL NIGNANLGN N Sbjct 181 WLASG--APAAAMTAAAGIPALAGGPTAINLGIANVGGGNVGNANNGLANIGNANLGNYN 238 Query 237 LGSGNFGSFNIGSANLGGNNIGIGNAGANNFGLANLGNLNTGFANAGIGNFGIANTGNNN 296 GSGNFG+ NIGSA+LG NNIG GN G+NN G+ NLGNLNTGFAN G+GNFG NTGNNN Sbjct 239 FGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLGNLNTGFANTGLGNFGFGNTGNNN 298 Query 297 IGNGLTGNNQIGIGGLNSGNGNVGLFNAGSANIGFFNSGNGNFGIGNSGNFSTGLFNPGH 356 IG GLTGNNQIGIGGLNSG GN GLFN+GS N+GFFNSGNGNFGIGNSGNF+TG +N GH Sbjct 299 IGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGNFGIGNSGNFNTGGWNSGH 358 Query 357 GNTGFLNAGSFNTGMFDVGNANTGSFNVGHYNFGAFNPGPSNTGTFNTGGANTGWFNTGS 416 GNTGF NAGSFNTGM DVGNANTGS N G YN G FNPG SNTGTFNTG ANTG+ N G+ Sbjct 359 GNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSNTGTFNTGNANTGFLNAGN 418 Query 417 INTGAFNIGDMNNGLFNTGDMNNGVFYRGVGQGSLQFAITSPDLTLPSLEIPGISVPAFS 476 INTG FNIG MNNGLFNTGDMNNGVFYRGVGQGSLQF+IT+PDLTLP L+IPGISVPAFS Sbjct 419 INTGVFNIGHMNNGLFNTGDMNNGVFYRGVGQGSLQFSITTPDLTLPPLQIPGISVPAFS 478 Query 477 LPAITLPSLTIPAVTTPANVTVGAFDLPGLTVPSLTIPAAMTPANITVGAFDLPGLTVPS 536 LPAITLPSL IPA TTPAN+TVGAF LPGLT+PSL IPAA TPANITVGAF LPGLT+PS Sbjct 479 LPAITLPSLNIPAATTPANITVGAFSLPGLTLPSLNIPAATTPANITVGAFSLPGLTLPS 538 Query 537 LTIPATTTPANITVGA--------------------------FNLPQLSIPSVTVPPITI 570 LTIPA TTPANITVGA F LP LSIPSV +PP+T+ Sbjct 539 LTIPAATTPANITVGAFSLPGLTLPSLNIPAATTPANITVSGFQLPPLSIPSVAIPPVTV 598 Query 571 PAGTALGAFNLPTLSIPSVTVPPITIPAGTTVGGFTLPTIHTPLISTPQISIGGFSTPGI 630 P T +GAFNLP L IP VT+P +TIPAG T+GGF+LP IHT I+ QI +G F P I Sbjct 599 PPIT-VGAFNLPPLQIPEVTIPQLTIPAGITIGGFSLPAIHTQPITVGQIGVGQFGLPSI 657 Query 631 ATQA--NSGVINLPTFSLNGITITNLVVFIPNNITALQTNMPGVFPQIGGFANTPPAFIN 688 ++ I +P F GI T QTN+P + P GG + Sbjct 658 GWDVFLSTPRITVPAF---GIPFT----------LQFQTNVPALQPPGGGLST------- 697 Query 689 TGTITVGGGQINGVGFSIGAINVTPFTLPNVVIQPWSLGG-------------------- 728 F+ GA+ F LP +V+ P++L G Sbjct 698 ---------------FTNGALIFGEFDLPQLVVHPYTLTGPIVIGSFFLPAFNIPGIDVP 742 Query 729 -ISVDGFTLPEISTQEFTTPALTISPIGVGALSLPDITTQQFTTPELTIDPITLGGFTLP 787 I+VDGFTLP+I+T TTP I PIGVG +LP ITTQ+ TPELTI+ I +GGFTLP Sbjct 743 AINVDGFTLPQITTPAITTPEFAIPPIGVGGFTLPQITTQEIITPELTINSIGVGGFTLP 802 Query 788 QLSIPAITTPAFTIDPIALGGFTLPQIMTPEITTPPFAIDPIGLSGFTLPQVNIPEITTP 847 Q++ P ITTP TIDPI L GFTLPQI TP ITTPP IDPI L+GFTLPQ+ P ITTP Sbjct 803 QITTPPITTPPLTIDPINLTGFTLPQITTPPITTPPLTIDPINLTGFTLPQITTPPITTP 862 Query 848 EFTIQPVGLAAFT 860 TI P+ L FT Sbjct 863 PLTIDPINLTGFT 875 >gi|15841218|ref|NP_336255.1| PPE family protein [Mycobacterium tuberculosis CDC1551] gi|13881441|gb|AAK46069.1| PPE family protein [Mycobacterium tuberculosis CDC1551] Length=1105 Score = 847 bits (2189), Expect = 0.0, Method: Compositional matrix adjust. Identities = 570/937 (61%), Positives = 657/937 (71%), Gaps = 110/937 (11%) Query 1 MHYSVLPPEINSALIFAGAGSGPMLAAASAWDGLATELASAAVSFGSVTAGLVGGSWQGR 60 M++SVLPPEINSALIFAGAG PM AAA+AWDGLA ELASAA SFGSVT+GLVGG+WQG Sbjct 1 MNFSVLPPEINSALIFAGAGPEPMAAAATAWDGLAMELASAAASFGSVTSGLVGGAWQGA 60 Query 61 SSVAMAAAAAPYAGWLAAAATQAEQAATQAQVMVAEFEAVRLAMVQPALVAANRSGLISL 120 SS AMAAAAAPYA WLAAAA QAEQ A QA M+AEFEAV+ A+VQP LVAANR+ L+SL Sbjct 61 SSSAMAAAAAPYAAWLAAAAVQAEQTAAQAAAMIAEFEAVKTAVVQPMLVAANRADLVSL 120 Query 121 VISNLFGQNAPAIAAAEAAYEEMWALDVSAMAAYHSGASAVAVALPAFALPLR----LPA 176 V+SNLFGQNAPAIAA EA YE+MWA DVSAM+AYH+GASA+A AL F+ PL+ LPA Sbjct 121 VMSNLFGQNAPAIAAIEATYEQMWAADVSAMSAYHAGASAIASALSPFSKPLQNLAGLPA 180 Query 177 GLAAGPAAVVTALTTAVGMPTFAGRAIAASLGLANVGGGNLGNANNGLGNIGNANLGNNN 236 LA+G A A+T A G+P AG A +LG+ANVGGGN+GNANNGL NIGNANLGN N Sbjct 181 WLASG--APAAAMTAAAGIPALAGGPTAINLGIANVGGGNVGNANNGLANIGNANLGNYN 238 Query 237 LGSGNFGSFNIGSANLGGNNIGIGNAGANNFGLANLGNLNTGFANAGIGNFGIANTGNNN 296 GSGNFG+ NIGSA+LG NNIG GN G+NN G+ NLGNLNTGFAN G+GNFG NTGNNN Sbjct 239 FGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLGNLNTGFANTGLGNFGFGNTGNNN 298 Query 297 IGNGLTGNNQIGIGGLNSGNGNVGLFNAGSANIGFFNSGNGNFGIGNSGNFSTGLFNPGH 356 IG GLTGNNQIGIGGLNSG GN GLFN+GS N+GFFNSGNGNFGIGNSGNF+TG +N GH Sbjct 299 IGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGNFGIGNSGNFNTGGWNSGH 358 Query 357 GNTGFLNAGSFNTGMFDVGNANTGSFNVGHYNFGAFNPGPSNTGTFNTGGANTGWFNTGS 416 GNTGF NAGSFNTGM DVGNANTGS N G YN G FNPG SNTGTFNTG ANTG+ N G+ Sbjct 359 GNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSNTGTFNTGNANTGFLNAGN 418 Query 417 INTGAFNIGDMNNGLFNTGDMNNGVFYRGVGQGSLQFAITSPDLTLPSLEIPGISVPAFS 476 INTG FNIG MNNGLFNTGDMNNGVFYRGVGQGSLQF+IT+PDLTLP L+IPGISVPAFS Sbjct 419 INTGVFNIGHMNNGLFNTGDMNNGVFYRGVGQGSLQFSITTPDLTLPPLQIPGISVPAFS 478 Query 477 LPAITLPSLTIPAVTTPANVTVGAFDLPGLTVPSLTIPAAMTPANITVGAFDLPGLTVPS 536 LPAITLPSLTIPA TTPAN+TVGAF LPGLT+PSL IPAA TPANITVGAF LPGLT+PS Sbjct 479 LPAITLPSLTIPAATTPANITVGAFSLPGLTLPSLNIPAATTPANITVGAFSLPGLTLPS 538 Query 537 LTIPATTTPANITVGAFNLPQLSIPSVTVPPITIPAGTALGAFNLPTLSIPSVTVPPITI 596 L IPA TTPANITVGAF+LP L++PS+ +P T PA +GAF+LP L++PS+ +P T Sbjct 539 LNIPAATTPANITVGAFSLPGLTLPSLNIPAATTPANITVGAFSLPGLTLPSLNIPAATT 598 Query 597 PAGTTVGGF-----TLPTIHTPLISTP-QISIGGFSTPGIATQANSGVINLPTFSLNGIT 650 PA TVG F TLP+++ P +TP I++G FS PG+ LP+ ++ T Sbjct 599 PANITVGAFSLPGLTLPSLNIPAATTPANITVGAFSLPGLT---------LPSLNIPAAT 649 Query 651 ITNLVVFIPNNITALQTNMPGV-FPQIGGFANTPPAFINTGTITVGGGQINGVG------ 703 P NIT ++PG+ P + A T PA ITV G Q+ + Sbjct 650 -------TPANITVGAFSLPGLTLPSLNIPAATTPA-----NITVSGFQLPPLSIPSVAI 697 Query 704 -------FSIGAINVTPFTLPNVVIQPWSL-GGISVDGFTLPEISTQEFTTPALTISPIG 755 ++GA N+ P +P V I ++ GI++ GF+LP I TQ +T+ IG Sbjct 698 PPVTVPPITVGAFNLPPLQIPEVTIPQLTIPAGITIGGFSLPAIHTQP-----ITVGQIG 752 Query 756 VGALSLPDI--------------------TTQ--------------------------QF 769 VG LP I T Q +F Sbjct 753 VGQFGLPSIGWDVFLSTPRITVPAFGIPFTLQFQTNVPALQPPGGGLSTFTNGALIFGEF 812 Query 770 TTPELTIDPITL------GGFTLPQLSIPAITTPAFTIDPIALGGFTLPQIMTPEITTPP 823 P+L + P TL G F LP +IP I PA +D GFTLPQI TP ITTP Sbjct 813 DLPQLVVHPYTLTGPIVIGSFFLPAFNIPGIDVPAINVD-----GFTLPQITTPAITTPE 867 Query 824 FAIDPIGLSGFTLPQVNIPEITTPEFTIQPVGLAAFT 860 FAI PIG+ GFTLPQ+ EI TPE TI +G+ FT Sbjct 868 FAIPPIGVGGFTLPQITTQEIITPELTINSIGVGGFT 904 Score = 444 bits (1141), Expect = 6e-122, Method: Compositional matrix adjust. Identities = 329/562 (59%), Positives = 381/562 (68%), Gaps = 66/562 (11%) Query 454 AITSPDLTLPSLEIPG------ISVPAFSLPAITLPSLTIPAVTTPANVTVGAFDLPGLT 507 A + P LTLPSL IP I+V AFSLP +TLPSL IPA TTPAN+TVGAF LPGLT Sbjct 580 AFSLPGLTLPSLNIPAATTPANITVGAFSLPGLTLPSLNIPAATTPANITVGAFSLPGLT 639 Query 508 VPSLTIPAAMTPANITVGAFDLPGLTVPSLTIPATTTPANITVGAFNLPQLSIPSVTVPP 567 +PSL IPAA TPANITVGAF LPGLT+PSL IPA TTPANITV F LP LSIPSV +PP Sbjct 640 LPSLNIPAATTPANITVGAFSLPGLTLPSLNIPAATTPANITVSGFQLPPLSIPSVAIPP 699 Query 568 ITIPAGTALGAFNLPTLSIPSVTVPPITIPAGTTVGGFTLPTIHTPLISTPQISIGGFST 627 +T+P T +GAFNLP L IP VT+P +TIPAG T+GGF+LP IHT I+ QI +G F Sbjct 700 VTVPPIT-VGAFNLPPLQIPEVTIPQLTIPAGITIGGFSLPAIHTQPITVGQIGVGQFGL 758 Query 628 PGIATQA--NSGVINLPTFSLNGITITNLVVFIPNNITALQTNMPGVFPQIGGFANTPPA 685 P I ++ I +P F GI T QTN+P + P GG + Sbjct 759 PSIGWDVFLSTPRITVPAF---GIPFT----------LQFQTNVPALQPPGGGLST---- 801 Query 686 FINTGTITVGGGQINGVGFSIGAINVTPFTLPNVVIQPWSLGG----------------- 728 F+ GA+ F LP +V+ P++L G Sbjct 802 ------------------FTNGALIFGEFDLPQLVVHPYTLTGPIVIGSFFLPAFNIPGI 843 Query 729 ----ISVDGFTLPEISTQEFTTPALTISPIGVGALSLPDITTQQFTTPELTIDPITLGGF 784 I+VDGFTLP+I+T TTP I PIGVG +LP ITTQ+ TPELTI+ I +GGF Sbjct 844 DVPAINVDGFTLPQITTPAITTPEFAIPPIGVGGFTLPQITTQEIITPELTINSIGVGGF 903 Query 785 TLPQLSIPAITTPAFTIDPIALGGFTLPQIMTPEITTPPFAIDPIGLSGFTLPQVNIPEI 844 TLPQ++ P ITTP TIDPI L GFTLPQI TP ITTPP IDPI L+GFTLPQ+ P I Sbjct 904 TLPQITTPPITTPPLTIDPINLTGFTLPQITTPPITTPPLTIDPINLTGFTLPQITTPPI 963 Query 845 TTPEFTIQPVGLAAFTTPALTIASIHLPSTTMGGFAIPAGPGYFNSSATPSLGFFNAGIG 904 TTP TI+P+G+ FTTP LT+ IHLPSTT+G FAIP GPGYFNSS PS GFFN+G G Sbjct 964 TTPPLTIEPIGVGGFTTPPLTVPGIHLPSTTIGAFAIPGGPGYFNSSTAPSSGFFNSGAG 1023 Query 905 GNSGFGNSGSGLSGWFNTSPVGLLAGSGYQNYGGLISGFSNLGSGISGFANTGTLPFAVT 964 GNSGFGN+GSGLSGWFNT+P GLL GSGYQN+GGL SGFSNLGSG+SGFAN G LPF+V Sbjct 1024 GNSGFGNNGSGLSGWFNTNPAGLLGGSGYQNFGGLSSGFSNLGSGVSGFANRGILPFSVA 1083 Query 965 SLVSGLANIGNNLSGLFFQSTT 986 S+VSG ANIG NL+G FFQ TT Sbjct 1084 SVVSGFANIGTNLAG-FFQGTT 1104 >gi|339631806|ref|YP_004723448.1| PPE family protein [Mycobacterium africanum GM041182] gi|339331162|emb|CCC26842.1| PPE family protein [Mycobacterium africanum GM041182] Length=1255 Score = 847 bits (2189), Expect = 0.0, Method: Compositional matrix adjust. Identities = 570/937 (61%), Positives = 657/937 (71%), Gaps = 110/937 (11%) Query 1 MHYSVLPPEINSALIFAGAGSGPMLAAASAWDGLATELASAAVSFGSVTAGLVGGSWQGR 60 M++SVLPPEINSALIFAGAG PM AAA+AWDGLA ELASAA SFGSVT+GLVGG+WQG Sbjct 1 MNFSVLPPEINSALIFAGAGPEPMAAAATAWDGLAMELASAAASFGSVTSGLVGGAWQGA 60 Query 61 SSVAMAAAAAPYAGWLAAAATQAEQAATQAQVMVAEFEAVRLAMVQPALVAANRSGLISL 120 SS AMAAAAAPYA WLAAAA QAEQ A QA M+AEFEAV+ A+VQP LVAANR+ L+SL Sbjct 61 SSSAMAAAAAPYAAWLAAAAVQAEQTAAQAAAMIAEFEAVKTAVVQPMLVAANRADLVSL 120 Query 121 VISNLFGQNAPAIAAAEAAYEEMWALDVSAMAAYHSGASAVAVALPAFALPLR----LPA 176 V+SNLFGQNAPAIAA EA YE+MWA DVSAM+AYH+GASA+A AL F+ PL+ LPA Sbjct 121 VMSNLFGQNAPAIAAIEATYEQMWAADVSAMSAYHAGASAIASALSPFSKPLQNLAGLPA 180 Query 177 GLAAGPAAVVTALTTAVGMPTFAGRAIAASLGLANVGGGNLGNANNGLGNIGNANLGNNN 236 LA+G A A+T A G+P AG A +LG+ANVGGGN+GNANNGL NIGNANLGN N Sbjct 181 WLASG--APAAAMTAAAGIPALAGGPTAINLGIANVGGGNVGNANNGLANIGNANLGNYN 238 Query 237 LGSGNFGSFNIGSANLGGNNIGIGNAGANNFGLANLGNLNTGFANAGIGNFGIANTGNNN 296 GSGNFG+ NIGSA+LG NNIG GN G+NN G+ NLGNLNTGFAN G+GNFG NTGNNN Sbjct 239 FGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLGNLNTGFANTGLGNFGFGNTGNNN 298 Query 297 IGNGLTGNNQIGIGGLNSGNGNVGLFNAGSANIGFFNSGNGNFGIGNSGNFSTGLFNPGH 356 IG GLTGNNQIGIGGLNSG GN GLFN+GS N+GFFNSGNGNFGIGNSGNF+TG +N GH Sbjct 299 IGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGNFGIGNSGNFNTGGWNSGH 358 Query 357 GNTGFLNAGSFNTGMFDVGNANTGSFNVGHYNFGAFNPGPSNTGTFNTGGANTGWFNTGS 416 GNTGF NAGSFNTGM DVGNANTGS N G YN G FNPG SNTGTFNTG ANTG+ N G+ Sbjct 359 GNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSNTGTFNTGNANTGFLNAGN 418 Query 417 INTGAFNIGDMNNGLFNTGDMNNGVFYRGVGQGSLQFAITSPDLTLPSLEIPGISVPAFS 476 INTG FNIG MNNGLFNTGDMNNGVFYRGVGQGSLQF+IT+PDLTLP L+IPGISVPAFS Sbjct 419 INTGVFNIGHMNNGLFNTGDMNNGVFYRGVGQGSLQFSITTPDLTLPPLQIPGISVPAFS 478 Query 477 LPAITLPSLTIPAVTTPANVTVGAFDLPGLTVPSLTIPAAMTPANITVGAFDLPGLTVPS 536 LPAITLPSLTIPA TTPAN+TVGAF LPGLT+PSL IPAA TPANITVGAF LPGLT+PS Sbjct 479 LPAITLPSLTIPAATTPANITVGAFSLPGLTLPSLNIPAATTPANITVGAFSLPGLTLPS 538 Query 537 LTIPATTTPANITVGAFNLPQLSIPSVTVPPITIPAGTALGAFNLPTLSIPSVTVPPITI 596 L IPA TTPANITVGAF+LP L++PS+ +P T PA +GAF+LP L++PS+ +P T Sbjct 539 LNIPAATTPANITVGAFSLPGLTLPSLNIPAATTPANITVGAFSLPGLTLPSLNIPAATT 598 Query 597 PAGTTVGGF-----TLPTIHTPLISTP-QISIGGFSTPGIATQANSGVINLPTFSLNGIT 650 PA TVG F TLP+++ P +TP I++G FS PG+ LP+ ++ T Sbjct 599 PANITVGAFSLPGLTLPSLNIPAATTPANITVGAFSLPGLT---------LPSLNIPAAT 649 Query 651 ITNLVVFIPNNITALQTNMPGV-FPQIGGFANTPPAFINTGTITVGGGQINGVG------ 703 P NIT ++PG+ P + A T PA ITV G Q+ + Sbjct 650 -------TPANITVGAFSLPGLTLPSLNIPAATTPA-----NITVSGFQLPPLSIPSVAI 697 Query 704 -------FSIGAINVTPFTLPNVVIQPWSL-GGISVDGFTLPEISTQEFTTPALTISPIG 755 ++GA N+ P +P V I ++ GI++ GF+LP I TQ +T+ IG Sbjct 698 PPVTVPPITVGAFNLPPLQIPEVTIPQLTIPAGITIGGFSLPAIHTQP-----ITVGQIG 752 Query 756 VGALSLPDI--------------------TTQ--------------------------QF 769 VG LP I T Q +F Sbjct 753 VGQFGLPSIGWDVFLSTPRITVPAFGIPFTLQFQTNVPALQPPGGGLSTFTNGALIFGEF 812 Query 770 TTPELTIDPITL------GGFTLPQLSIPAITTPAFTIDPIALGGFTLPQIMTPEITTPP 823 P+L + P TL G F LP +IP I PA +D GFTLPQI TP ITTP Sbjct 813 DLPQLVVHPYTLTGPIVIGSFFLPAFNIPGIDVPAINVD-----GFTLPQITTPAITTPE 867 Query 824 FAIDPIGLSGFTLPQVNIPEITTPEFTIQPVGLAAFT 860 FAI PIG+ GFTLPQ+ EI TPE TI +G+ FT Sbjct 868 FAIPPIGVGGFTLPQITTQEIITPELTINSIGVGGFT 904 Score = 289 bits (739), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 312/655 (48%), Positives = 365/655 (56%), Gaps = 128/655 (19%) Query 454 AITSPDLTLPSLEIPG------ISVPAFSLPAITLPSLTIPAVTTPANVTVGAFDLPGLT 507 A + P LTLPSL IP I+V AFSLP +TLPSL IPA TTPAN+TVGAF LPGLT Sbjct 606 AFSLPGLTLPSLNIPAATTPANITVGAFSLPGLTLPSLNIPAATTPANITVGAFSLPGLT 665 Query 508 VPSLTIPAAMTPANITV-------------------------GAFDLPGLTVPSLTIPAT 542 +PSL IPAA TPANITV GAF+LP L +P +TIP Sbjct 666 LPSLNIPAATTPANITVSGFQLPPLSIPSVAIPPVTVPPITVGAFNLPPLQIPEVTIPQL 725 Query 543 TTPANIT--------------------VGAFNLPQ------LSIPSVTVPPITIP----- 571 T PA IT VG F LP LS P +TVP IP Sbjct 726 TIPAGITIGGFSLPAIHTQPITVGQIGVGQFGLPSIGWDVFLSTPRITVPAFGIPFTLQF 785 Query 572 -------------------AGTALGAFNLPTLSI----------------PSVTVPPITI 596 G F+LP L + P+ +P I + Sbjct 786 QTNVPALQPPGGGLSTFTNGALIFGEFDLPQLVVHPYTLTGPIVIGSFFLPAFNIPGIDV 845 Query 597 PAGTTVGGFTLPTIHTPLISTPQ-----ISIGGFSTPGIATQANSGVINLPTFSLNGITI 651 PA V GFTLP I TP I+TP+ I +GGF+ P I TQ I P ++N I + Sbjct 846 PA-INVDGFTLPQITTPAITTPEFAIPPIGVGGFTLPQITTQE----IITPELTINSIGV 900 Query 652 TNLVVFIPNNITALQTNMPGVFPQIGGFANTPPAFINTGTITVGGGQINGVGFSIGA--- 708 + + + GF T + IN GF++ Sbjct 901 GGFTLPQITTPPITTPPLTIDPINLTGFTLPQITTPPITTPPLTIDPINLTGFTLPQITT 960 Query 709 ------------INVTPFTLPNVVIQPWSLGG-----ISVDGFTLPEISTQEFTTPALTI 751 IN+T FTLP + P + I++ GFTLP+I+T TTP LTI Sbjct 961 PPITTPPLTIDPINLTGFTLPQITTPPITTPPLTIDPINLTGFTLPQITTPPITTPPLTI 1020 Query 752 SPIGVGALSLPDITTQQFTTPELTIDPITLGGFTLPQLSIPAITTPAFTIDPIALGGFTL 811 PI + +LP ITT TTP LTIDPI L GFTLPQ++ P ITTP TIDPI L GFTL Sbjct 1021 DPINLTGFTLPQITTPPITTPPLTIDPINLTGFTLPQITTPPITTPPLTIDPINLTGFTL 1080 Query 812 PQIMTPEITTPPFAIDPIGLSGFTLPQVNIPEITTPEFTIQPVGLAAFTTPALTIASIHL 871 PQI TP ITTPP IDPI L+GFTLPQ+ P ITTP TI+P+G+ FTTP LT+ IHL Sbjct 1081 PQITTPPITTPPLTIDPINLTGFTLPQITTPPITTPPLTIEPIGVGGFTTPPLTVPGIHL 1140 Query 872 PSTTMGGFAIPAGPGYFNSSATPSLGFFNAGIGGNSGFGNSGSGLSGWFNTSPVGLLAGS 931 PSTT+G FAIP GPGYFNSS PS GFFN+G GGNSGFGN+GSGLSGWFNT+P GLL GS Sbjct 1141 PSTTIGAFAIPGGPGYFNSSTAPSSGFFNSGAGGNSGFGNNGSGLSGWFNTNPAGLLGGS 1200 Query 932 GYQNYGGLISGFSNLGSGISGFANTGTLPFAVTSLVSGLANIGNNLSGLFFQSTT 986 GYQN+GGL SGFSNLGSG+SGFAN G LPF+V S+VSG ANIG NL+G FFQ TT Sbjct 1201 GYQNFGGLSSGFSNLGSGVSGFANRGILPFSVASVVSGFANIGTNLAG-FFQGTT 1254 >gi|340626761|ref|YP_004745213.1| ppe family protein [Mycobacterium canettii CIPT 140010059] gi|340004951|emb|CCC44099.1| ppe family protein [Mycobacterium canettii CIPT 140010059] Length=1308 Score = 837 bits (2162), Expect = 0.0, Method: Compositional matrix adjust. Identities = 578/989 (59%), Positives = 672/989 (68%), Gaps = 122/989 (12%) Query 1 MHYSVLPPEINSALIFAGAGSGPMLAAASAWDGLATELASAAVSFGSVTAGLVGGSWQGR 60 M++SVLPPEINSALIFAGAG PM AAA+AWDGLA ELASAA SFGSVT+GLVGG+WQG Sbjct 1 MNFSVLPPEINSALIFAGAGPEPMAAAATAWDGLAMELASAAASFGSVTSGLVGGAWQGA 60 Query 61 SSVAMAAAAAPYAGWLAAAATQAEQAATQAQVMVAEFEAVRLAMVQPALVAANRSGLISL 120 SS AMAAAAAPYA WLAAAA QAEQ A QA M+AEFEAV+ A+VQP LVAANR+ L+SL Sbjct 61 SSSAMAAAAAPYAAWLAAAAVQAEQTAAQAAAMIAEFEAVKTAVVQPMLVAANRADLVSL 120 Query 121 VISNLFGQNAPAIAAAEAAYEEMWALDVSAMAAYHSGASAVAVALPAFALPLR----LPA 176 V+SNLFGQNAPAIAA EA YE+MWA DVSAM+AYH+GASA+A AL F+ PL+ LPA Sbjct 121 VMSNLFGQNAPAIAAIEATYEQMWAADVSAMSAYHAGASAIASALSPFSKPLQNLAGLPA 180 Query 177 GLAAGPAAVVTALTTAVGMPTFAGRAIAASLGLANVGGGNLGNANNGLGNIGNANLGNNN 236 LA+G A A+T A G+P AG A +LG+ANVGGGN+GNANNGL NIGNANLGN N Sbjct 181 WLASG--APAAAMTAAAGIPALAGGPTAINLGIANVGGGNVGNANNGLANIGNANLGNYN 238 Query 237 LGSGNFGSFNIGSANLGGNNIGIGNAGANNFGLANLGNLNTGFANAGIGNFGIANTGNNN 296 GSGNFG+ NIGSA+LG NNIG GN G+NN G+ NLGNLNTGFAN G+GNFG NTGNNN Sbjct 239 FGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLGNLNTGFANTGLGNFGFGNTGNNN 298 Query 297 IGNGLTGNNQIGIGGLNSGNGNVGLFNAGSANIGFFNSGNGNFGIGNSGNFSTGLFNPGH 356 IG GLTGNNQIGIGGLNSG GN GLFN+GS N+GFFNSGNGNFGIGNSGNF+TG +N GH Sbjct 299 IGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGNFGIGNSGNFNTGGWNSGH 358 Query 357 GNTGFLNAGSFNTGMFDVGNANTGSFNVGHYNFGAFNPGPSNTGTFNTGGANTGWFNTGS 416 GNTGF NAGSFNTGM DVGNANTGS N G YN G FNPG SNTGTFNTG ANTG+ N G+ Sbjct 359 GNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSNTGTFNTGNANTGFLNAGN 418 Query 417 INTGAFNIGDMNNGLFNTGDMNNGVFYRGVGQGSLQFAITSPDLTLPSLEIPGISVPAFS 476 INTG FNIG MNNGLFNTGDMNNGVFYRGVGQGSLQF+IT+PDLTLP L+IPGISVPAFS Sbjct 419 INTGVFNIGHMNNGLFNTGDMNNGVFYRGVGQGSLQFSITTPDLTLPPLQIPGISVPAFS 478 Query 477 LPAITLPSLTIPAVTTPANVTVGAFDLPGLTVPSLTIPAAMTPANITVGAFDLPGLTVPS 536 LPAITLPSLTIPA TTPAN+TVGAF LPGLT+PSL IPAA TPANITVGAF LPGLT+PS Sbjct 479 LPAITLPSLTIPAATTPANITVGAFSLPGLTLPSLNIPAATTPANITVGAFSLPGLTLPS 538 Query 537 LTIPATTTPANITVGAFNLPQLSIPSVTVPPITIPAGTALGAFNLPTLSIPSVTVPPITI 596 LTIPA TTPANITVGAF+LP L++PS+ +P T PA +GAF+LP L++PS+ +P T Sbjct 539 LTIPAATTPANITVGAFSLPGLTLPSLNIPAATTPANITVGAFSLPGLTLPSLNIPAATT 598 Query 597 PAGTTVGGF-----TLPTIHTPLISTP-QISIGGFSTPGI----------ATQANSGVIN 640 PA TVG F TLP+++ P +TP I++G FS PG+ T AN I Sbjct 599 PANITVGAFSLPGLTLPSLNIPAATTPANITVGAFSLPGLTLPSLTIPAATTPAN---IT 655 Query 641 LPTFSLNGITITNLVV---FIPNNITALQTNMPGV-FPQIGGFANTPPAFINTGTITVGG 696 + FSL G+T+ +L + P NIT ++PG+ P + A T PA I G ++ G Sbjct 656 VGAFSLPGLTLPSLNIPAATTPANITVGAFSLPGLTLPSLNIPAATTPANITVGAFSLPG 715 Query 697 GQINGV---------GFSIGAINVTPFTLPNVVIQPWSL-GGISVDGFTLPEISTQEFTT 746 + + ++GA ++ TLP++ I + I+V GF LP +S Sbjct 716 LTLPSLNIPAATTPANITVGAFSLPGLTLPSLNIPAATTPANITVSGFQLPPLSIPSVAI 775 Query 747 PALTISPIGVGALSLPDITTQQFTTPELTIDP-ITLGGFTLPQ----------------- 788 P +T+ PI VGA +LP + + T P+LTI IT+GGF+LP Sbjct 776 PPVTVPPITVGAFNLPPLQIPEVTIPQLTIPAGITIGGFSLPAIHTQPITVGQIGVGQFG 835 Query 789 ---------LSIPAITTPAFTID------------------------------------- 802 LS P IT PAF I Sbjct 836 LPSIGWDVFLSTPRITVPAFGIPFTLQFQTNVPALQPPGGGLSTFTNGALIFGEFDLPQL 895 Query 803 ---------PIALGGFTLPQIMTPEITTPPFAIDPIGLSGFTLPQVNIPEITTPEFTIQP 853 PI +G F LP P I P +D GFTLPQ+ P ITTPEF I P Sbjct 896 VVHPYTLTGPIVIGSFFLPAFNIPGIDVPAINVD-----GFTLPQITTPAITTPEFAIPP 950 Query 854 VGLAAFTTPALTIASIHLPSTTMGGFAIP 882 +G+ FT P +T I P FAIP Sbjct 951 IGVGGFTLPQITTQEIITPE-----FAIP 974 Score = 282 bits (721), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 310/635 (49%), Positives = 360/635 (57%), Gaps = 113/635 (17%) Query 454 AITSPDLTLPSLEIPG------ISVPAFSLPAITLPSLTIPAVTTPANVTVGAFDLPGLT 507 A + P LTLPSL IP I+V AFSLP +TLPSL IPA TTPAN+TVGAF LPGLT Sbjct 684 AFSLPGLTLPSLNIPAATTPANITVGAFSLPGLTLPSLNIPAATTPANITVGAFSLPGLT 743 Query 508 VPSLTIPAAMTPANITV-------------------------GAFDLPGLTVPSLTIPAT 542 +PSL IPAA TPANITV GAF+LP L +P +TIP Sbjct 744 LPSLNIPAATTPANITVSGFQLPPLSIPSVAIPPVTVPPITVGAFNLPPLQIPEVTIPQL 803 Query 543 TTPANIT--------------------VGAFNLPQ------LSIPSVTVPPITIP----- 571 T PA IT VG F LP LS P +TVP IP Sbjct 804 TIPAGITIGGFSLPAIHTQPITVGQIGVGQFGLPSIGWDVFLSTPRITVPAFGIPFTLQF 863 Query 572 -------------------AGTALGAFNLPTLSI----------------PSVTVPPITI 596 G F+LP L + P+ +P I + Sbjct 864 QTNVPALQPPGGGLSTFTNGALIFGEFDLPQLVVHPYTLTGPIVIGSFFLPAFNIPGIDV 923 Query 597 PAGTTVGGFTLPTIHTPLISTPQ-----ISIGGFSTPGIATQANSGVINLPTFSLNGITI 651 PA V GFTLP I TP I+TP+ I +GGF+ P I TQ I P F++ I + Sbjct 924 PA-INVDGFTLPQITTPAITTPEFAIPPIGVGGFTLPQITTQE----IITPEFAIPPIGV 978 Query 652 TNLVVFIPNNITALQTNMPGVFPQIGGFANTPPAFINTGTITVGGGQINGVGFSIGAINV 711 + + + GF T + IN GF++ I Sbjct 979 GGFTLPQITTPPITTPPLTIDPINLAGFTLPQITTPPITTPPLTIDPINLAGFTLPQITT 1038 Query 712 TPFTLPNVVIQPWSLGGISVDGFTLPEISTQEFTTPALTISPIGVGALSLPDITTQQFTT 771 P T P + I P I++ GFTLP+I+T TTP LTI PI + +LP ITT TT Sbjct 1039 PPITTPPLTIDP-----INLTGFTLPQITTPPITTPPLTIDPINLTGFTLPQITTPPITT 1093 Query 772 PELTIDPITLGGFTLPQLSIPAITTPAFTIDPIALGGFTLPQIMTPEITTPPFAIDPIGL 831 P LTIDPI L GFTLPQ++ P ITTP TIDPI L GFTLPQI TP ITTPP IDPI L Sbjct 1094 PPLTIDPINLTGFTLPQITTPPITTPPLTIDPINLTGFTLPQITTPPITTPPLTIDPINL 1153 Query 832 SGFTLPQVNIPEITTPEFTIQPVGLAAFTTPALTIASIHLPSTTMGGFAIPAGPGYFNSS 891 +GFTLPQ+ P ITTP TI P+G+ FTTP LT+ IHLPSTT+G FAIP GPGYFNSS Sbjct 1154 TGFTLPQITTPPITTPPLTIPPIGVGGFTTPPLTVPGIHLPSTTIGAFAIPGGPGYFNSS 1213 Query 892 ATPSLGFFNAGIGGNSGFGNSGSGLSGWFNTSPVGLLAGSGYQNYGGLISGFSNLGSGIS 951 PS GFFN+G GGNSGFGN+GSGLSGWFNT+P GLL GSGYQN+GGL SGFSNLGSG+S Sbjct 1214 TAPSSGFFNSGAGGNSGFGNNGSGLSGWFNTNPAGLLGGSGYQNFGGLSSGFSNLGSGVS 1273 Query 952 GFANTGTLPFAVTSLVSGLANIGNNLSGLFFQSTT 986 GFAN G LPF+V S+VSG ANIG NL+G FFQ TT Sbjct 1274 GFANRGILPFSVASVVSGFANIGTNLAG-FFQGTT 1307 >gi|289443216|ref|ZP_06432960.1| PPE family protein [Mycobacterium tuberculosis T46] gi|289416135|gb|EFD13375.1| PPE family protein [Mycobacterium tuberculosis T46] Length=1152 Score = 815 bits (2106), Expect = 0.0, Method: Compositional matrix adjust. Identities = 562/946 (60%), Positives = 650/946 (69%), Gaps = 111/946 (11%) Query 6 LPPEINSALIFAGAGSGPMLAAASAWDGLATE-LASAAVSFGSVTAGLVGGSWQGRSSVA 64 +PPEINSALIFAGAG PM +GL AS SFGSVT+GLVGG+WQG SS A Sbjct 1 MPPEINSALIFAGAGPEPMARPRRPGNGLGHRNWASGRSSFGSVTSGLVGGAWQGASSSA 60 Query 65 MAAAAAPYAGWLAAAATQAEQAATQAQVMVAEFEAVRLAMVQPALVAANRSGLISLVISN 124 MAAAAAPYA WLAAAA QAEQ A QA M+AEFEAV+ A+VQP LVAANR+ L+SLV+SN Sbjct 61 MAAAAAPYAAWLAAAAVQAEQTAAQAAAMIAEFEAVKTAVVQPMLVAANRADLVSLVMSN 120 Query 125 LFGQNAPAIAAAEAAYEEMWALDVSAMAAYHSGASAVAVALPAFALPLR----LPAGLAA 180 LFGQNAPAIAA EA YE+MWA DVSAM+AYH+GASA+A AL F+ PL+ LPA LA+ Sbjct 121 LFGQNAPAIAAIEATYEQMWAADVSAMSAYHAGASAIASALSPFSKPLQNLAGLPAWLAS 180 Query 181 GPAAVVTALTTAVGMPTFAGRAIAASLGLANVGGGNLGNANNGLGNIGNANLGNNNLGSG 240 G A A+T A G+P AG A +LG+ANVGGGN+GNANNGL NIGNANLGN N GSG Sbjct 181 G--APAAAMTAAAGIPALAGGPTAINLGIANVGGGNVGNANNGLANIGNANLGNYNFGSG 238 Query 241 NFGSFNIGSANLGGNNIGIGNAGANNFGLANLGNLNTGFANAGIGNFGIANTGNNNIGNG 300 NFG+ NIGSA+LG NNIG GN G+NN G+ NLGNLNTGFAN G+GNFG NTGNNNIG G Sbjct 239 NFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLGNLNTGFANTGLGNFGFGNTGNNNIGIG 298 Query 301 LTGNNQIGIGGLNSGNGNVGLFNAGSANIGFFNSGNGNFGIGNSGNFSTGLFNPGHGNTG 360 LTGNNQIGIGGLNSG GN GLFN+GS N+GFFNSGNGNFGIGNSGNF+TG +N GHGNTG Sbjct 299 LTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGNFGIGNSGNFNTGGWNSGHGNTG 358 Query 361 FLNAGSFNTGMFDVGNANTGSFNVGHYNFGAFNPGPSNTGTFNTGGANTGWFNTGSINTG 420 F NAGSFNTGM DVGNANTGS N G YN G FNPG SNTGTFNTG ANTG+ N G+INTG Sbjct 359 FFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSNTGTFNTGNANTGFLNAGNINTG 418 Query 421 AFNIGDMNNGLFNTGDMNNGVFYRGVGQGSLQFAITSPDLTLPSLEIPGISVPAFSLPAI 480 FNIG MNNGLFNTGDMNNGVFYRGVGQGSLQF+IT+PDLTLP L+IPGISVPAFSLPAI Sbjct 419 VFNIGHMNNGLFNTGDMNNGVFYRGVGQGSLQFSITTPDLTLPPLQIPGISVPAFSLPAI 478 Query 481 TLPSLTIPAVTTPANVTVGAFDLPGLTVPSLTIPAAMTPANITVGAFDLPGLTVPSLTIP 540 TLPSLTIPA TTPAN+TVGAF LPGLT+PSL IPAA TPANITVGAF LPGLT+PSL IP Sbjct 479 TLPSLTIPAATTPANITVGAFSLPGLTLPSLNIPAATTPANITVGAFSLPGLTLPSLNIP 538 Query 541 ATTTPANITVGAFNLPQLSIPSVTVPPITIPAGTALGAFNLPTLSIPSVTVPPITIPAGT 600 A TTPANITVGAF+LP L++PS+ +P T PA +GAF+LP L++PS+ +P T PA Sbjct 539 AATTPANITVGAFSLPGLTLPSLNIPAATTPANITVGAFSLPGLTLPSLNIPAATTPANI 598 Query 601 TVGGF-----TLPTIHTPLISTP-QISIGGFSTPGI----------ATQANSGVINLPTF 644 TVG F TLP+++ P +TP I++G FS PG+ T AN I + F Sbjct 599 TVGAFSLPGLTLPSLNIPAATTPANITVGAFSLPGLTLPSLNIPAATTPAN---ITVGAF 655 Query 645 SLNGITITNLVV---FIPNNITALQTNMPGV-FPQIGGFANTPPAFINTGTITVGGGQIN 700 SL G+T+ +L + P NIT ++PG+ P + A T PA ITV G Q+ Sbjct 656 SLPGLTLPSLNIPAATTPANITVGAFSLPGLTLPSLNIPAATTPA-----NITVSGFQLP 710 Query 701 GVG-------------FSIGAINVTPFTLPNVVIQPWSL-GGISVDGFTLPEISTQEFTT 746 + ++GA N+ P +P V I ++ GI++ GF+LP I TQ Sbjct 711 PLSIPSVAIPPVTVPPITVGAFNLPPLQIPEVTIPQLTIPAGITIGGFSLPAIHTQP--- 767 Query 747 PALTISPIGVGALSLPDI--------------------TTQ------------------- 767 +T+ IGVG LP I T Q Sbjct 768 --ITVGQIGVGQFGLPSIGWDVFLSTPRITVPAFGIPFTLQFQTNVPALQPPGGGLSTFT 825 Query 768 -------QFTTPELTIDPITL------GGFTLPQLSIPAITTPAFTIDPIALGGFTLPQI 814 +F P+L + P TL G F LP +IP I PA +D GFTLPQI Sbjct 826 NGALIFGEFDLPQLVVHPYTLTGPIVIGSFFLPAFNIPGIDVPAINVD-----GFTLPQI 880 Query 815 MTPEITTPPFAIDPIGLSGFTLPQVNIPEITTPEFTIQPVGLAAFT 860 TP ITTP FAI PIG+ GFTLPQ+ EI TPE TI +G+ FT Sbjct 881 TTPAITTPEFAIPPIGVGGFTLPQITTQEIITPELTINSIGVGGFT 926 Score = 434 bits (1116), Expect = 4e-119, Method: Compositional matrix adjust. Identities = 331/587 (57%), Positives = 381/587 (65%), Gaps = 91/587 (15%) Query 454 AITSPDLTLPSLEIPG------ISVPAFSLPAITLPSLTIPAVTTPANVTVGAFDLPGLT 507 A + P LTLPSL IP I+V AFSLP +TLPSL IPA TTPAN+TVGAF LPGLT Sbjct 602 AFSLPGLTLPSLNIPAATTPANITVGAFSLPGLTLPSLNIPAATTPANITVGAFSLPGLT 661 Query 508 VPSLTIPAAMTPANITVGAFDLPGLTVPSLTIPATTTPANITVGAFNLPQLSIPSVTVPP 567 +PSL IPAA TPANITVGAF LPGLT+PSL IPA TTPANITV F LP LSIPSV +PP Sbjct 662 LPSLNIPAATTPANITVGAFSLPGLTLPSLNIPAATTPANITVSGFQLPPLSIPSVAIPP 721 Query 568 ITIPAGTALGAFNLPTLSIPSVTVPPITIPAGTTVGGFTLPTIHTPLISTPQISIGGFST 627 +T+P T +GAFNLP L IP VT+P +TIPAG T+GGF+LP IHT I+ QI +G F Sbjct 722 VTVPPIT-VGAFNLPPLQIPEVTIPQLTIPAGITIGGFSLPAIHTQPITVGQIGVGQFGL 780 Query 628 PGIATQA--NSGVINLPTFSLNGITITNLVVFIPNNITALQTNMPGVFPQIGGFANTPPA 685 P I ++ I +P F GI T QTN+P + P GG + Sbjct 781 PSIGWDVFLSTPRITVPAF---GIPFT----------LQFQTNVPALQPPGGGLST---- 823 Query 686 FINTGTITVGGGQINGVGFSIGAINVTPFTLPNVVIQPWSLGG----------------- 728 F+ GA+ F LP +V+ P++L G Sbjct 824 ------------------FTNGALIFGEFDLPQLVVHPYTLTGPIVIGSFFLPAFNIPGI 865 Query 729 ----ISVDGFTLPEISTQEFTTPALTISPIGVGALSLPDITTQQFTTPELTI-------- 776 I+VDGFTLP+I+T TTP I PIGVG +LP ITTQ+ TPELTI Sbjct 866 DVPAINVDGFTLPQITTPAITTPEFAIPPIGVGGFTLPQITTQEIITPELTINSIGVGGF 925 Query 777 -----------------DPITLGGFTLPQLSIPAITTPAFTIDPIALGGFTLPQIMTPEI 819 DPI L GFTLPQ++ P ITTP TIDPI L GFTLPQI TP I Sbjct 926 TLPQITTPPITTPPLTIDPINLTGFTLPQITTPPITTPPLTIDPINLTGFTLPQITTPPI 985 Query 820 TTPPFAIDPIGLSGFTLPQVNIPEITTPEFTIQPVGLAAFTTPALTIASIHLPSTTMGGF 879 TTPP IDPI L+GFTLPQ+ P ITTP TI+P+G+ FTTP LT+ IHLPSTT+G F Sbjct 986 TTPPLTIDPINLTGFTLPQITTPPITTPPLTIEPIGVGGFTTPPLTVPGIHLPSTTIGAF 1045 Query 880 AIPAGPGYFNSSATPSLGFFNAGIGGNSGFGNSGSGLSGWFNTSPVGLLAGSGYQNYGGL 939 AIP GPGYFNSS PS GFFN+G GGNSGFGN+GSGLSGWFNT+P GLL GSGYQN+GGL Sbjct 1046 AIPGGPGYFNSSTAPSSGFFNSGAGGNSGFGNNGSGLSGWFNTNPAGLLGGSGYQNFGGL 1105 Query 940 ISGFSNLGSGISGFANTGTLPFAVTSLVSGLANIGNNLSGLFFQSTT 986 SGFSNLGSG+SGFAN G LPF+V S+VSG ANIG NL+G FFQ TT Sbjct 1106 SSGFSNLGSGVSGFANRGILPFSVASVVSGFANIGTNLAG-FFQGTT 1151 Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 66/178 (38%), Positives = 87/178 (49%), Gaps = 23/178 (12%) Query 715 TLPNVVIQPWSLGGISVDGFTLPEISTQEFTTPALTI-SPIGVGALSLPDITTQQFTTP- 772 T P++ + P + GISV F+LP I+ T PA T + I VGA SLP +T P Sbjct 454 TTPDLTLPPLQIPGISVPAFSLPAITLPSLTIPAATTPANITVGAFSLPGLTLPSLNIPA 513 Query 773 -----ELTIDPITLGGFTLPQLSIPAITTPA-FTIDPIALGGFTLPQIMTPEITTPP-FA 825 +T+ +L G TLP L+IPA TTPA T+ +L G TLP + P TTP Sbjct 514 ATTPANITVGAFSLPGLTLPSLNIPAATTPANITVGAFSLPGLTLPSLNIPAATTPANIT 573 Query 826 IDPIGLSGFTLPQVNIPEITTPEFTIQPVGLAAFTTPALTIASIHLPSTTMGGFAIPA 883 + L G TLP +NIP TTP +T+ + LP T+ IPA Sbjct 574 VGAFSLPGLTLPSLNIPAATTPA--------------NITVGAFSLPGLTLPSLNIPA 617 Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 44/128 (35%), Positives = 62/128 (49%), Gaps = 16/128 (12%) Query 758 ALSLPDITTQQFTTPELTIDPITLGGFTLPQLSIPAITTPA-FTIDPIALGGFTLPQIMT 816 +++ PD+T P +++ +L TLP L+IPA TTPA T+ +L G TLP + Sbjct 452 SITTPDLTLPPLQIPGISVPAFSLPAITLPSLTIPAATTPANITVGAFSLPGLTLPSLNI 511 Query 817 PEITTPP-FAIDPIGLSGFTLPQVNIPEITTPEFTIQPVGLAAFTTPALTIASIHLPSTT 875 P TTP + L G TLP +NIP TTP +T+ + LP T Sbjct 512 PAATTPANITVGAFSLPGLTLPSLNIPAATTPA--------------NITVGAFSLPGLT 557 Query 876 MGGFAIPA 883 + IPA Sbjct 558 LPSLNIPA 565 >gi|183981049|ref|YP_001849340.1| PPE family protein [Mycobacterium marinum M] gi|183174375|gb|ACC39485.1| PPE family protein [Mycobacterium marinum M] Length=1398 Score = 800 bits (2067), Expect = 0.0, Method: Compositional matrix adjust. Identities = 497/904 (55%), Positives = 619/904 (69%), Gaps = 62/904 (6%) Query 1 MHYSVLPPEINSALIFAGAGSGPMLAAASAWDGLATELASAAVSFGSVTAGLVGGSWQGR 60 M++SVLPPE+NSALIF G G+ PM AA+AW G+A EL SAA SF SVT+GLVGG+WQG Sbjct 1 MNFSVLPPEVNSALIFTGPGAEPMRTAATAWGGMAVELESAADSFASVTSGLVGGAWQGA 60 Query 61 SSVAMAAAAAPYAGWLAAAATQAEQAATQAQVMVAEFEAVRLAMVQPALVAANRSGLISL 120 SSVAM AAA Y GWL AAA AEQAA QA+ +VAEF A + AMVQP L+AANRS L+SL Sbjct 61 SSVAMGTAAASYLGWLNAAAAHAEQAAAQAEALVAEFAAAQSAMVQPFLLAANRSSLVSL 120 Query 121 VISNLFGQNAPAIAAAEAAYEEMWALDVSAMAAYHSGASAVAVALPAFALPLR----LPA 176 V+SNLFGQNAPAIAA EA YE+MWALDVS MA YH+GASA A +L A PL+ LP Sbjct 121 VLSNLFGQNAPAIAAVEAEYEQMWALDVSTMATYHAGASAAAASLTPLAQPLQNLSDLPG 180 Query 177 GLAAG-----PAAVVTALTTAVGMPTFAGRAIAASLGLANVGGGNLGNANNGLGNIGNAN 231 + A PA VTA TA+ +P A + GLAN+G GN+GNANNG+GN+G+ N Sbjct 181 RVIAAFGNGAPATTVTAAVTALRLP---ADASTVNFGLANIGSGNVGNANNGIGNLGSGN 237 Query 232 LGNNNLGSGNFGSFNIGSANLGGNNIGIGNAGANNFGLANLGNLNTGFANAGIGNFGIAN 291 LGN NLGSGN GS N G ANLG NNIG N+G NN G NLG LNTGFANAG GNFG AN Sbjct 238 LGNFNLGSGNLGSANAGWANLGSNNIGGANSGGNNLGWGNLGGLNTGFANAGSGNFGFAN 297 Query 292 TGNNNIGNGLTGNNQIGIGGLNSGNGNVGLFNAGSANIGFFNSGNGNFGIGNSGNFSTGL 351 TGNNNIG GLTG+NQ+GIGGLNSG GN GLFN+G+ N+G FNSG GNFGIGNSG + TGL Sbjct 298 TGNNNIGIGLTGDNQVGIGGLNSGVGNFGLFNSGTGNVGLFNSGTGNFGIGNSGAYGTGL 357 Query 352 FNPGHGNTGFLNAGSFNTGMFDVGNANTGSFNVGHYNFGAFNPGPSNTGTFNTGGANTGW 411 FN G NTG LNAGSFNTG+ DVGNANTGS N G +N G+FNPGPSNTG NTG ANTGW Sbjct 358 FNSGQANTGLLNAGSFNTGLLDVGNANTGSLNTGSFNMGSFNPGPSNTGALNTGTANTGW 417 Query 412 FNTGSINTGAFNIGDMNNGLFNTGDMNNGVFYRGVGQGSLQFAITSPDLTLPSLEIPGIS 471 FNTGS+NTGAFNIGDMNNGLFNTG+MNNG+FYRGVGQG+ F+IT+PDLTLP LEIPGI+ Sbjct 418 FNTGSLNTGAFNIGDMNNGLFNTGEMNNGIFYRGVGQGNFYFSITTPDLTLPPLEIPGIT 477 Query 472 VPAFSLPAITLPSLTIPAVTTPANVTVGAFDLPGLTVPSLTIPAAMTPANITVGAFDLPG 531 +P SLP IT+P+LTIPA TTPANV VG FDLPG+T+P+LTIPAA TPAN+ VG FDLPG Sbjct 478 IPNLSLPPITVPALTIPAATTPANVVVGGFDLPGVTLPALTIPAATTPANVVVGGFDLPG 537 Query 532 LTVPSLTIPATTTPANITVGAFNLPQLSIPSVTVPPITIPAGTALGAFNLPTLSIPSVTV 591 +T+P+LTIPA TTPAN+ VG F+LP +++P++T+P T PA +G F+LP +++P++T+ Sbjct 538 VTLPALTIPAATTPANVVVGGFDLPGVTLPALTIPAATTPANVVVGGFDLPGVTLPALTI 597 Query 592 PPITIPAGTTVGGFTLPTIHTPLISTP------QISIGGFSTPGIATQANSGVINLPTFS 645 P T PA VGGF LP + P ++ P + +GGF PG + LP + Sbjct 598 PAATTPANVVVGGFDLPGVTLPALTIPAATTPANVVVGGFDLPG---------VTLPALT 648 Query 646 LNGITITNLVVFIPNNITALQTNMPGV-FPQIGGFANTPPAFINTGTITVGGGQINGVGF 704 + T P N+ ++PGV P + T PA + VGG + GV Sbjct 649 IPAAT-------TPANVVVGGFDLPGVTLPAL-----TIPAATTPANVVVGGFDLPGV-- 694 Query 705 SIGAINVTPFTLPNVVIQPWSLGGISVDGFTLPEISTQEFTTPALTISP-IGVGALSLPD 763 ++ A+ + T P V+ V GF LP++ T P LT++ VGA SLP+ Sbjct 695 TLPALTIPAATTPANVV---------VGGFDLPQLGIPSLTIPPLTLAEGTTVGAFSLPE 745 Query 764 ITTQQFTTPELTI-DPITLGGFTLPQLSIPAITTPAFTI-DPIALGGFTLPQIMTPEITT 821 + T P LT+ + T+G F+LP+L IP++T P T+ + +G F+LPQ+ P +T Sbjct 746 LGIPSLTIPPLTLAEGTTVGAFSLPELGIPSLTIPPLTLAEGTTVGAFSLPQLGIPSLTI 805 Query 822 PPFAIDPIGLSGFTLPQVNIPEITTPEFTIQPVGLAAFTTPALTIAS----IHLPSTTMG 877 P + +G T+ ++P + T T+ + F TPA++ S + LP+ T+ Sbjct 806 PSLTVP----AGTTVGGFDLPALQTRSITVGGIDAGGFRTPAISTVSSTGYLELPTVTIP 861 Query 878 GFAI 881 G + Sbjct 862 GVRV 865 Score = 410 bits (1054), Expect = 6e-112, Method: Compositional matrix adjust. Identities = 239/513 (47%), Positives = 312/513 (61%), Gaps = 90/513 (17%) Query 458 PDLTLPSLEIPGISVPA------FSLPAITLPSLTIPAVTTPANVTVGAFDLPGLTVPSL 511 P +TLP+L IP + PA F LP +TLP+LTIPA TTPANV VG FDLPG+T+P+L Sbjct 614 PGVTLPALTIPAATTPANVVVGGFDLPGVTLPALTIPAATTPANVVVGGFDLPGVTLPAL 673 Query 512 TIPAAMTPANITVGAFDLPGLTVPSLTIPATTTPANITVGAFNLPQLSIPSVTVPPITIP 571 TIPAA TPAN+ VG FDLPG+T+P+LTIPA TTPAN+ VG F+LPQL IPS+T+PP+T+ Sbjct 674 TIPAATTPANVVVGGFDLPGVTLPALTIPAATTPANVVVGGFDLPQLGIPSLTIPPLTLA 733 Query 572 AGTALGAFNLPTLSIPSVTVPPIT------------------------------------ 595 GT +GAF+LP L IPS+T+PP+T Sbjct 734 EGTTVGAFSLPELGIPSLTIPPLTLAEGTTVGAFSLPELGIPSLTIPPLTLAEGTTVGAF 793 Query 596 ----------------IPAGTTVGGFTLPTIHTPLISTPQISIGGFSTPGIATQANSGVI 639 +PAGTTVGGF LP + T I+ I GGF TP I+T +++G + Sbjct 794 SLPQLGIPSLTIPSLTVPAGTTVGGFDLPALQTRSITVGGIDAGGFRTPAISTVSSTGYL 853 Query 640 NLPTFSLNGITITNLVVFIPNNITALQTNMPGVFPQIGGFANTPPAFINTGTITVGGGQI 699 LPT ++ G+ + N V FIPNNI LQT PGV PQIGG + A+I+TG I + G I Sbjct 854 ELPTVTIPGVRVNNFVAFIPNNIEFLQTGQPGVIPQIGGLEHQ--AYISTGDIVIQGFSI 911 Query 700 NGVGFSIGAINVTPFTLPN-------------------------VVIQPWSLGGISVDGF 734 +G+GFS+ I+V FTLP + P + +SV GF Sbjct 912 SGIGFSLPQIDVGAFTLPELTIPPIGIPPTIVGAFTLPEITTPVITTPPLVVDPVSVAGF 971 Query 735 TLPEISTQEFTTPALTISPIGVGALSLPDITTQQFTTPELTIDPITLGGFTLPQLSIPAI 794 TLPEI+T EFTTP L + P+ V +LP+ITT +FTTP L +DP+++ GFTLP+++ P Sbjct 972 TLPEITTPEFTTPPLVVDPVSVAGFTLPEITTPEFTTPPLVVDPVSVAGFTLPEITTPEF 1031 Query 795 TTPAFTIDPIALGGFTLPQIMTPEITTPPFAIDPIGLSGFTLPQVNIPEITTPEFTIQPV 854 TTP +DP+++ GFTLPQI TPE TT PF IDP+ ++GFTLPQ++ PE TT FTI PV Sbjct 1032 TTPPLVVDPVSVAGFTLPQISTPEFTTAPFTIDPVSVAGFTLPQISTPEFTTAPFTIDPV 1091 Query 855 GLAAFT-----TPALTIASIHLPSTTMGGFAIP 882 +A FT TP T A + ++ GF +P Sbjct 1092 SVAGFTLPQISTPEFTTAPFTIDPVSVAGFTLP 1124 Score = 368 bits (944), Expect = 4e-99, Method: Compositional matrix adjust. Identities = 256/550 (47%), Positives = 332/550 (61%), Gaps = 60/550 (10%) Query 446 VGQGSLQFAITSPDLTLPSLEIPGISVPAFSLPAITLPSLTIPAVTTPANVT----VGAF 501 +G Q I++ D+ + I GI FSLP I + + T+P +T P VGAF Sbjct 890 IGGLEHQAYISTGDIVIQGFSISGI---GFSLPQIDVGAFTLPELTIPPIGIPPTIVGAF 946 Query 502 DLPGLTVPSLTIPAAMTPANITVGAFDLPGLTVPSLTIPATTTPANITVGAFNLPQLSIP 561 LP +T P +T P + ++V F LP +T P T P ++V F LP+++ P Sbjct 947 TLPEITTPVITTPPLVV-DPVSVAGFTLPEITTPEFTTPPLVV-DPVSVAGFTLPEITTP 1004 Query 562 SVTVPPITIPAGTALGAFNLPTLSIPSVTVPPITIPAGTTVGGFTLPTIHTPLIST---- 617 T PP+ + ++ F LP ++ P T PP+ + +V GFTLP I TP +T Sbjct 1005 EFTTPPLVVDP-VSVAGFTLPEITTPEFTTPPLVVDP-VSVAGFTLPQISTPEFTTAPFT 1062 Query 618 -PQISIGGFSTPGIATQANSGVINLPTFSLNGITITNLVVFIPNNITALQTNMPGVFPQI 676 +S+ GF+ P I+T P F+ TI P ++ PQI Sbjct 1063 IDPVSVAGFTLPQIST---------PEFTTAPFTID------PVSVAGFT------LPQI 1101 Query 677 GGFANTPPAFINTGTITVGGGQINGVGFSIGAINVTPFTLPNV-----VIQPWSLGGISV 731 +TP + F+I ++V FTLP + P+++ +SV Sbjct 1102 ----STP--------------EFTTAPFTIDPVSVAGFTLPQISTPEFTTAPFTIDPVSV 1143 Query 732 DGFTLPEISTQEFTTPALTISPIGVGALSLPDITTQQFTTPELTIDPITLGGFTLPQLSI 791 GFTLP+IST EFTT TI P+ V +LP I+T +FTT TIDP+++ GFTLPQ+S Sbjct 1144 AGFTLPQISTPEFTTAPFTIDPVSVAGFTLPQISTPEFTTAPFTIDPVSVAGFTLPQIST 1203 Query 792 PAITTPAFTIDPIALGGFTLPQIMTPEITTPPFAIDPIGLSGFTLPQVNIPEITTPEFTI 851 P TT FTIDP+++ GFTLPQI TPE TT PF IDP+ ++GFTLPQ++ P+ TT TI Sbjct 1204 PEFTTAPFTIDPVSVAGFTLPQISTPEFTTAPFTIDPVSVAGFTLPQISTPQFTTAPITI 1263 Query 852 QPVGLAAFTTPALTIASIHLPSTTMGGFAIPAGPGYFNSSATPSLGFFNAGIGGNSGFGN 911 P+GL +FTTP LTI SIHLP TT+G FA PAGPGY NSSATPS GFFN+G GGNSG GN Sbjct 1264 PPIGLGSFTTPPLTIPSIHLPGTTIGEFAFPAGPGYLNSSATPSSGFFNSGAGGNSGLGN 1323 Query 912 SGSGLSGWFNTSPVGLLAGSGYQNYGGLISGFSNLGSGISGFANTGTLPFAVTSLVSGLA 971 +GSGLSGWFNT+PVGLL GSGYQNYGGL SGFSNLGSG+SGFANTG PF++T L+SG A Sbjct 1324 NGSGLSGWFNTNPVGLLGGSGYQNYGGLSSGFSNLGSGVSGFANTGVRPFSLTGLISGFA 1383 Query 972 NIGNNLSGLF 981 NIG+NLSG F Sbjct 1384 NIGSNLSGFF 1393 Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 64/197 (33%), Positives = 100/197 (51%), Gaps = 22/197 (11%) Query 703 GFSIGAINVTPFTLPNVVIQPWS------LGGISVDGFTLPEISTQEFTTPALTISPIGV 756 G +I +++ P T+P + I + +GG + G TLP ++ TTPA + V Sbjct 475 GITIPNLSLPPITVPALTIPAATTPANVVVGGFDLPGVTLPALTIPAATTPANVV----V 530 Query 757 GALSLPDITTQQFTTPELTIDP-ITLGGFTLPQLSIPAITTPAFTIDP-IALGGFTLPQI 814 G LP +T T P T + +GGF LP +++PA+T PA T + +GGF LP + Sbjct 531 GGFDLPGVTLPALTIPAATTPANVVVGGFDLPGVTLPALTIPAATTPANVVVGGFDLPGV 590 Query 815 MTPEITTPPFAIDP--IGLSGFTLPQVNIPEITTPEFTIQP-VGLAAFTTPALTIASIHL 871 P +T P A P + + GF LP V +P +T P T V + F P +T+ ++ + Sbjct 591 TLPALTIPA-ATTPANVVVGGFDLPGVTLPALTIPAATTPANVVVGGFDLPGVTLPALTI 649 Query 872 PSTT------MGGFAIP 882 P+ T +GGF +P Sbjct 650 PAATTPANVVVGGFDLP 666 Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 56/156 (36%), Positives = 82/156 (53%), Gaps = 12/156 (7%) Query 738 EISTQEFTTPALTISPIGVGALSLPDITTQQFTTPELTIDP-ITLGGFTLPQLSIPAITT 796 I+T + T P L I I + LSLP IT T P T + +GGF LP +++PA+T Sbjct 460 SITTPDLTLPPLEIPGITIPNLSLPPITVPALTIPAATTPANVVVGGFDLPGVTLPALTI 519 Query 797 PAFTIDP-IALGGFTLPQIMTPEITTPPFAIDP--IGLSGFTLPQVNIPEITTPEFTIQP 853 PA T + +GGF LP + P +T P A P + + GF LP V +P +T P T Sbjct 520 PAATTPANVVVGGFDLPGVTLPALTIPA-ATTPANVVVGGFDLPGVTLPALTIPAATTPA 578 Query 854 -VGLAAFTTPALTIASIHLPSTT------MGGFAIP 882 V + F P +T+ ++ +P+ T +GGF +P Sbjct 579 NVVVGGFDLPGVTLPALTIPAATTPANVVVGGFDLP 614 Score = 38.1 bits (87), Expect = 7.6, Method: Compositional matrix adjust. Identities = 25/67 (38%), Positives = 35/67 (53%), Gaps = 6/67 (8%) Query 818 EITTPPFAIDPIGLSGFTLPQVNIPEITTPEFTIQPVGLAAFTTPA-LTIASIHLPSTTM 876 ITTP + P+ + G T+P +++P IT P TI A TTPA + + LP T+ Sbjct 460 SITTPDLTLPPLEIPGITIPNLSLPPITVPALTIP-----AATTPANVVVGGFDLPGVTL 514 Query 877 GGFAIPA 883 IPA Sbjct 515 PALTIPA 521 >gi|289750313|ref|ZP_06509691.1| PPE family protein [Mycobacterium tuberculosis T92] gi|289690900|gb|EFD58329.1| PPE family protein [Mycobacterium tuberculosis T92] Length=1053 Score = 755 bits (1950), Expect = 0.0, Method: Compositional matrix adjust. Identities = 496/847 (59%), Positives = 577/847 (69%), Gaps = 110/847 (12%) Query 104 MVQPALVAANRSGLISLVISNLFGQNAPAIAAAEAAYEEMWALDVSAMAAYHSGASAVAV 163 MVQP LVAANR+ L+SLV+SNLFGQNAPAIAA EA YE+MWA DVSAM+AYH+GASA+A Sbjct 1 MVQPMLVAANRADLVSLVMSNLFGQNAPAIAAIEATYEQMWAADVSAMSAYHAGASAIAS 60 Query 164 ALPAFALPLR----LPAGLAAGPAAVVTALTTAVGMPTFAGRAIAASLGLANVGGGNLGN 219 AL F+ PL+ LPA LA+G A A+T A G+P AG A +LG+ANVGGGN+GN Sbjct 61 ALSPFSKPLQNLAGLPAWLASG--APAAAMTAAAGIPALAGGPTAINLGIANVGGGNVGN 118 Query 220 ANNGLGNIGNANLGNNNLGSGNFGSFNIGSANLGGNNIGIGNAGANNFGLANLGNLNTGF 279 ANNGL NIGNANLGN N GSGNFG+ NIGSA+LG NNIG GN G+NN G+ NLGNLNTGF Sbjct 119 ANNGLANIGNANLGNYNFGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLGNLNTGF 178 Query 280 ANAGIGNFGIANTGNNNIGNGLTGNNQIGIGGLNSGNGNVGLFNAGSANIGFFNSGNGNF 339 AN G+GNFG NTGNNNIG GLTGNNQIGIGGLNSG GN GLFN+GS N+GFFNSGNGNF Sbjct 179 ANTGLGNFGFGNTGNNNIGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGNF 238 Query 340 GIGNSGNFSTGLFNPGHGNTGFLNAGSFNTGMFDVGNANTGSFNVGHYNFGAFNPGPSNT 399 GIGNSGNF+TG +N GHGNTGF NAGSFNTGM DVGNANTGS N G YN G FNPG SNT Sbjct 239 GIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSNT 298 Query 400 GTFNTGGANTGWFNTGSINTGAFNIGDMNNGLFNTGDMNNGVFYRGVGQGSLQFAITSPD 459 GTFNTG ANTG+ N G+INTG FNIG MNNGLFNTGDMNNGVFYRGVGQGSLQF+IT+PD Sbjct 299 GTFNTGNANTGFLNAGNINTGVFNIGHMNNGLFNTGDMNNGVFYRGVGQGSLQFSITTPD 358 Query 460 LTLPSLEIPGISVPAFSLPAITLPSLTIPAVTTPANVTVGAFDLPGLTVPSLTIPAAMTP 519 LTLP L+IPGISVPAFSLPAITLPSLTIPA TTPAN+TVGAF LPGLT+PSL IPAA TP Sbjct 359 LTLPPLQIPGISVPAFSLPAITLPSLTIPAATTPANITVGAFSLPGLTLPSLNIPAATTP 418 Query 520 ANITVGAFDLPGLTVPSLTIPATTTPANITVGAFNLPQLSIPSVTVPPITIPAGTALGAF 579 ANITVGAF LPGLT+PSL IPA TTPANITVGAF+LP L++PS+ +P T PA +GAF Sbjct 419 ANITVGAFSLPGLTLPSLNIPAATTPANITVGAFSLPGLTLPSLNIPAATTPANITVGAF 478 Query 580 NLPTLSIPSVTVPPITIPAGTTVGGF-----TLPTIHTPLISTP-QISIGGFSTPGI--- 630 +LP L++PS+ +P T PA TVG F TLP+++ P +TP I++G FS PG+ Sbjct 479 SLPGLTLPSLNIPAATTPANITVGAFSLPGMTLPSLNIPAATTPANITVGAFSLPGLTLP 538 Query 631 -------ATQANSGVINLPTFSLNGITITNLVV---FIPNNITALQTNMPGV-FPQIGGF 679 T AN I + FSL G+T+ +L + P NIT ++PG+ P + Sbjct 539 SLNIPAATTPAN---ITVGAFSLPGLTLPSLNIPAATTPANITVGAFSLPGLTLPSLNIP 595 Query 680 ANTPPAFINTGTITVGGGQINGVG-------------FSIGAINVTPFTLPNVVIQPWSL 726 A T PA ITV G Q+ + ++GA N+ P +P V I ++ Sbjct 596 AATTPA-----NITVSGFQLPPLSIPSVAIPPVTVPPITVGAFNLPPLQIPEVTIPQLTI 650 Query 727 -GGISVDGFTLPEISTQEFTTPALTISPIGVGALSLPDI--------------------T 765 GI++ GF+LP I TQ +T+ IGVG LP I T Sbjct 651 PAGITIGGFSLPAIHTQP-----ITVGQIGVGQFGLPSIGWDVFLSTPRITVPAFGIPFT 705 Query 766 TQ--------------------------QFTTPELTIDPITL------GGFTLPQLSIPA 793 Q +F P+L + P TL G F LP +IP Sbjct 706 LQFQTNVPALQPPGGGLSTFTNGALIFGEFDLPQLVVHPYTLTGPIVIGSFFLPAFNIPG 765 Query 794 ITTPAFTIDPIALGGFTLPQIMTPEITTPPFAIDPIGLSGFTLPQVNIPEITTPEFTIQP 853 I PA +D GFTLPQI TP ITTP FAI PIG+ GFTLPQ+ EI TPE TI Sbjct 766 IDVPAINVD-----GFTLPQITTPAITTPEFAIPPIGVGGFTLPQITTQEIITPELTINS 820 Query 854 VGLAAFT 860 +G+ FT Sbjct 821 IGVGGFT 827 Score = 432 bits (1110), Expect = 2e-118, Method: Compositional matrix adjust. Identities = 330/587 (57%), Positives = 381/587 (65%), Gaps = 91/587 (15%) Query 454 AITSPDLTLPSLEIPG------ISVPAFSLPAITLPSLTIPAVTTPANVTVGAFDLPGLT 507 A + P +TLPSL IP I+V AFSLP +TLPSL IPA TTPAN+TVGAF LPGLT Sbjct 503 AFSLPGMTLPSLNIPAATTPANITVGAFSLPGLTLPSLNIPAATTPANITVGAFSLPGLT 562 Query 508 VPSLTIPAAMTPANITVGAFDLPGLTVPSLTIPATTTPANITVGAFNLPQLSIPSVTVPP 567 +PSL IPAA TPANITVGAF LPGLT+PSL IPA TTPANITV F LP LSIPSV +PP Sbjct 563 LPSLNIPAATTPANITVGAFSLPGLTLPSLNIPAATTPANITVSGFQLPPLSIPSVAIPP 622 Query 568 ITIPAGTALGAFNLPTLSIPSVTVPPITIPAGTTVGGFTLPTIHTPLISTPQISIGGFST 627 +T+P T +GAFNLP L IP VT+P +TIPAG T+GGF+LP IHT I+ QI +G F Sbjct 623 VTVPPIT-VGAFNLPPLQIPEVTIPQLTIPAGITIGGFSLPAIHTQPITVGQIGVGQFGL 681 Query 628 PGIATQA--NSGVINLPTFSLNGITITNLVVFIPNNITALQTNMPGVFPQIGGFANTPPA 685 P I ++ I +P F GI T QTN+P + P GG + Sbjct 682 PSIGWDVFLSTPRITVPAF---GIPFT----------LQFQTNVPALQPPGGGLST---- 724 Query 686 FINTGTITVGGGQINGVGFSIGAINVTPFTLPNVVIQPWSLGG----------------- 728 F+ GA+ F LP +V+ P++L G Sbjct 725 ------------------FTNGALIFGEFDLPQLVVHPYTLTGPIVIGSFFLPAFNIPGI 766 Query 729 ----ISVDGFTLPEISTQEFTTPALTISPIGVGALSLPDITTQQFTTPELTI-------- 776 I+VDGFTLP+I+T TTP I PIGVG +LP ITTQ+ TPELTI Sbjct 767 DVPAINVDGFTLPQITTPAITTPEFAIPPIGVGGFTLPQITTQEIITPELTINSIGVGGF 826 Query 777 -----------------DPITLGGFTLPQLSIPAITTPAFTIDPIALGGFTLPQIMTPEI 819 DPI L GFTLPQ++ P ITTP TIDPI L GFTLPQI TP I Sbjct 827 TLPQITTPPITTPPLTIDPINLTGFTLPQITTPPITTPPLTIDPINLTGFTLPQITTPPI 886 Query 820 TTPPFAIDPIGLSGFTLPQVNIPEITTPEFTIQPVGLAAFTTPALTIASIHLPSTTMGGF 879 TTPP IDPI L+GFTLPQ+ P ITTP TI+P+G+ FTTP LT+ IHLPSTT+G F Sbjct 887 TTPPLTIDPINLTGFTLPQITTPPITTPPLTIEPIGVGGFTTPPLTVPGIHLPSTTIGAF 946 Query 880 AIPAGPGYFNSSATPSLGFFNAGIGGNSGFGNSGSGLSGWFNTSPVGLLAGSGYQNYGGL 939 AIP GPGYFNSS PS GFFN+G GGNSGFGN+GSGLSGWFNT+P GLL GSGYQN+GGL Sbjct 947 AIPGGPGYFNSSTAPSSGFFNSGAGGNSGFGNNGSGLSGWFNTNPAGLLGGSGYQNFGGL 1006 Query 940 ISGFSNLGSGISGFANTGTLPFAVTSLVSGLANIGNNLSGLFFQSTT 986 SGFSNLGSG+SGFAN G LPF+V S+VSG ANIG NL+G FFQ TT Sbjct 1007 SSGFSNLGSGVSGFANRGILPFSVASVVSGFANIGTNLAG-FFQGTT 1052 Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 66/178 (38%), Positives = 87/178 (49%), Gaps = 23/178 (12%) Query 715 TLPNVVIQPWSLGGISVDGFTLPEISTQEFTTPALTI-SPIGVGALSLPDITTQQFTTP- 772 T P++ + P + GISV F+LP I+ T PA T + I VGA SLP +T P Sbjct 355 TTPDLTLPPLQIPGISVPAFSLPAITLPSLTIPAATTPANITVGAFSLPGLTLPSLNIPA 414 Query 773 -----ELTIDPITLGGFTLPQLSIPAITTPA-FTIDPIALGGFTLPQIMTPEITTPP-FA 825 +T+ +L G TLP L+IPA TTPA T+ +L G TLP + P TTP Sbjct 415 ATTPANITVGAFSLPGLTLPSLNIPAATTPANITVGAFSLPGLTLPSLNIPAATTPANIT 474 Query 826 IDPIGLSGFTLPQVNIPEITTPEFTIQPVGLAAFTTPALTIASIHLPSTTMGGFAIPA 883 + L G TLP +NIP TTP +T+ + LP T+ IPA Sbjct 475 VGAFSLPGLTLPSLNIPAATTPA--------------NITVGAFSLPGMTLPSLNIPA 518 Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 44/128 (35%), Positives = 62/128 (49%), Gaps = 16/128 (12%) Query 758 ALSLPDITTQQFTTPELTIDPITLGGFTLPQLSIPAITTPA-FTIDPIALGGFTLPQIMT 816 +++ PD+T P +++ +L TLP L+IPA TTPA T+ +L G TLP + Sbjct 353 SITTPDLTLPPLQIPGISVPAFSLPAITLPSLTIPAATTPANITVGAFSLPGLTLPSLNI 412 Query 817 PEITTPP-FAIDPIGLSGFTLPQVNIPEITTPEFTIQPVGLAAFTTPALTIASIHLPSTT 875 P TTP + L G TLP +NIP TTP +T+ + LP T Sbjct 413 PAATTPANITVGAFSLPGLTLPSLNIPAATTPA--------------NITVGAFSLPGLT 458 Query 876 MGGFAIPA 883 + IPA Sbjct 459 LPSLNIPA 466 >gi|183980953|ref|YP_001849244.1| PPE family protein [Mycobacterium marinum M] gi|183174279|gb|ACC39389.1| PPE family protein [Mycobacterium marinum M] Length=1221 Score = 748 bits (1930), Expect = 0.0, Method: Compositional matrix adjust. Identities = 531/991 (54%), Positives = 635/991 (65%), Gaps = 127/991 (12%) Query 1 MHYSVLPPEINSALIFAGAGSGPMLAAASAWDGLATELASAAVSFGSVTAGLVGGSWQGR 60 M++SVLPPEINSA IFAGAGS PML AA+AW GLA ELASAA SFGSVT+GLV GSWQG Sbjct 1 MNFSVLPPEINSARIFAGAGSSPMLDAAAAWQGLAKELASAADSFGSVTSGLVDGSWQGP 60 Query 61 SSVAMAAAAAPYAGWLAAAATQAEQAATQAQVMVAEFEAVRLAMVQPALVAANRSGLISL 120 S+ AM A AAPYAGWL A A QA+QAA QA V+EFEAV+ AMV+PALVAANRS L+SL Sbjct 61 SAAAMTAVAAPYAGWLGAVAAQAQQAAGQAGAFVSEFEAVQSAMVRPALVAANRSDLVSL 120 Query 121 VISNLFGQNAPAIAAAEAAYEEMWALDVSAMAAYHSGASAVAVALPAFALPLRLPAGL-A 179 V+SNLFGQNAPAIAA E+AYEEMWALDV+ MAAYHSGAS V AL F PL AG+ A Sbjct 121 VLSNLFGQNAPAIAATESAYEEMWALDVAVMAAYHSGASTVVSALTPFTAPLANVAGVPA 180 Query 180 AGPAAVVTALTTAVGMPTFAGRAIAASLGLANVGGGNLGNANNGLGNIGNANLGNNNLGS 239 AA++ + V P + I +LGLANVG GN+GNANNGLGNIGN NLGN N GS Sbjct 181 QAAAALMNSAAPMVAAPAATAQLIGVNLGLANVGSGNVGNANNGLGNIGNGNLGNGNFGS 240 Query 240 GNFGSFNIGSANLGGNNIGIGNAGANNFGLANLGNLNTGFANAGIGNFGIANTGNNNIGN 299 GN GS N G ANLG NNIG+ NAG N G N+GN+NTGF N GIGNFG+ANTGNNNIG Sbjct 241 GNLGSSNFGWANLGSNNIGVANAGGGNQGFGNIGNVNTGFGNTGIGNFGLANTGNNNIGI 300 Query 300 GLTGNNQIGIGGLNSGNGNVGLFNAGSANIGFFNSGNGNFGIGNSGNFSTGLFNPGHGNT 359 LTG+NQIGIGGLNSG GN GLFN+G+ N+GFFNSGNGNFGIGN+G+F+TG++N G GN+ Sbjct 301 ALTGDNQIGIGGLNSGVGNFGLFNSGTGNVGFFNSGNGNFGIGNTGDFNTGVWNSGSGNS 360 Query 360 GFLNAGSFNTGMFDVGNANTGSFNVGHYNFGAFNPGPSNTGTFNTGGANTGWFNTGSINT 419 GF N G FNTG+ DVGNANTG N G YN G+FNPG SNTG FN G NTGWFN G +NT Sbjct 361 GFFNPGMFNTGVLDVGNANTGYLNTGSYNMGSFNPGASNTGAFNIGDGNTGWFNNGDLNT 420 Query 420 GAFNIGDMNNGLFNTGDMNNGVFYRGVGQGSLQFAITSPDLTLPSLEIPGISVPAFSLPA 479 GA N GDMNNGL NTGD+NNG FYRGVGQGSL FAIT+PDLTLP LE+ GIS+PAFSLP Sbjct 421 GALNFGDMNNGLLNTGDLNNGFFYRGVGQGSLHFAITTPDLTLPPLELAGISIPAFSLPP 480 Query 480 ITLPSLTIPAVTTPANVTVGAFDLPGLTVPSLTIPAAMTPANITVGAFDLPGLTVPSLTI 539 IT+PS++IPA++TPAN+TVG FDLPG+T+P L IPAA TPA+I VG FDLPG+T+P L I Sbjct 481 ITVPSMSIPAISTPANITVGGFDLPGITLPGLDIPAATTPADIVVGGFDLPGITLPGLDI 540 Query 540 PATTTPANITVGAFNLPQLSIPSVTVPPITIPAGTALGAFNLPTLSIPSVTVPPITIPAG 599 PA TTPA+I VG F+LP +++P + +P +T PA +G F+LP +++P + +P +T PA Sbjct 541 PAVTTPADIVVGGFDLPGITLPGLDIPAVTTPADIVVGGFDLPGITLPGLDIPAVTTPAD 600 Query 600 TTVGGF-----TLPTIHTPLISTP-QISIGGFSTPGIATQANSGVINLPT---------- 643 VGGF TLP + P ++TP I +GGF PGI +++P Sbjct 601 IVVGGFDLPGITLPGLDIPAVTTPADIVVGGFDLPGITLPG----LDIPAVTTPADIVVG 656 Query 644 -FSLNGITITNL---VVFIPNNITALQTNMPGVFPQIGGFA----NTPPAFINT---GTI 692 F L GIT+ L V P NIT +GGF P I + G I Sbjct 657 GFDLPGITLPGLDIPAVTTPPNIT------------VGGFGLPEFTIPSLTIPSQALGNI 704 Query 693 TVGGGQINGVGFSIGAINVTPFTLPNVVIQPWSLGGISVDGFTLPEISTQEFTTPAL--- 749 VGG + + + I+V P LP + I P + ++V GFT P IS + P + Sbjct 705 AVGGFDLPQI--TTPPISVPPVALPEISIPPITTPRVTVSGFTGPSISAPGWFLPTIITP 762 Query 750 TISPI------GVGALSLPDITTQQFTTP---ELTIDPITLGGFT-LP--------QLSI 791 T+SPI V L + D+ T TT I I G + LP +LSI Sbjct 763 TVSPIPPFNQNPVDLLLVRDVFTNSVTTKIQLPTFIPRIVFGAYPGLPGGENGVIGELSI 822 Query 792 PAI-----TTPAFTIDP----------IALGGFTLP---------------QIMTPEIT- 820 P + T P FTID I L GFT+P I TPEIT Sbjct 823 PGVTFGSFTLPYFTIDDPNGGNWTIPSIGLSGFTIPSTTFDPINVAAFMLPDITTPEITT 882 Query 821 -------------------TPPFA-----IDPIGLSGFTLPQVNIPEITTPEFTIQPVGL 856 TPPF+ IDPIGL GFTLPQ++ P +T FTI P+GL Sbjct 883 TAITIPSIGVDEFTLPQISTPPFSTDPFTIDPIGLGGFTLPQISTPPFSTDPFTIDPIGL 942 Query 857 AAFT-----TPALTIASIHLPSTTMGGFAIP 882 FT TP + + +GGF +P Sbjct 943 GGFTLPQISTPPFSTDPFTIDPIGLGGFTLP 973 Score = 468 bits (1203), Expect = 3e-129, Method: Compositional matrix adjust. Identities = 312/640 (49%), Positives = 379/640 (60%), Gaps = 121/640 (18%) Query 458 PDLTLPSLEIPGISVPA------FSLPAITLPSLTIPAVTTPANVTVGAFDLPGLTVPSL 511 P +TLP L+IP ++ PA F LP ITLP L IPAVTTPA++ VG FDLPG+T+P L Sbjct 583 PGITLPGLDIPAVTTPADIVVGGFDLPGITLPGLDIPAVTTPADIVVGGFDLPGITLPGL 642 Query 512 TIPAAMTPANITVGAFDLPGLTVPSLTIPATTTPANITVGAFNLPQLSIPSVTVPPITIP 571 IPA TPA+I VG FDLPG+T+P L IPA TTP NITVG F LP+ +IPS+T+P + Sbjct 643 DIPAVTTPADIVVGGFDLPGITLPGLDIPAVTTPPNITVGGFGLPEFTIPSLTIPSQAL- 701 Query 572 AGTALGAFNLPTLSIPSVTVPP-----ITIPAGTT----VGGFT----------LPTIHT 612 A+G F+LP ++ P ++VPP I+IP TT V GFT LPTI T Sbjct 702 GNIAVGGFDLPQITTPPISVPPVALPEISIPPITTPRVTVSGFTGPSISAPGWFLPTIIT 761 Query 613 PLIS--------------------------------TPQIS--------------IGGFS 626 P +S P+I IG S Sbjct 762 PTVSPIPPFNQNPVDLLLVRDVFTNSVTTKIQLPTFIPRIVFGAYPGLPGGENGVIGELS 821 Query 627 TPGIA-----------TQANSGVINLPTFSLNGITI-------TNLVVFIPNNITALQTN 668 PG+ N G +P+ L+G TI N+ F+ +IT + Sbjct 822 IPGVTFGSFTLPYFTIDDPNGGNWTIPSIGLSGFTIPSTTFDPINVAAFMLPDITTPEIT 881 Query 669 MPGV-----------FPQIGGFANTPPAFINTGTIT-VGGG-----QINGVGFSIGAINV 711 + PQI +TPP + TI +G G QI+ FS + Sbjct 882 TTAITIPSIGVDEFTLPQI----STPPFSTDPFTIDPIGLGGFTLPQISTPPFSTDPFTI 937 Query 712 TP-----FTLPNVVIQPWSLGGISVD-----GFTLPEISTQEFTTPALTISPIGVGALSL 761 P FTLP + P+S ++D GFTLP+IST F+T TI PIG+G +L Sbjct 938 DPIGLGGFTLPQISTPPFSTDPFTIDPIGLGGFTLPQISTPPFSTDPFTIDPIGLGGFTL 997 Query 762 PDITTQQFTTPELTIDPITLGGFTLPQLSIPAITTPAFTIDPIALGGFTLPQIMTPEITT 821 P I+T F+T TIDPI LGGFTLPQ+S P +T FTIDPI LGGFTLPQI TP I+T Sbjct 998 PQISTPPFSTDPFTIDPIGLGGFTLPQISTPPFSTDPFTIDPIGLGGFTLPQISTPPIST 1057 Query 822 PPFAIDPIGLSGFTLPQVNIPEITTPEFTIQPVGLAAFTTPALTIASIHLPSTTMGGFAI 881 PF IDPI ++GFTLPQ+NIP TT EFTI P+G+ FTTP +TI SIHLPSTT+ FAI Sbjct 1058 DPFTIDPIAVAGFTLPQINIPAFTTNEFTIAPIGIGGFTTPPITIPSIHLPSTTLAEFAI 1117 Query 882 PAGPGYFNSSATPSLGFFNAGIGGNSGFGNSGSGLSGWFNTSPVGLLAGSGYQNYGGLIS 941 P GPGY N+SATPS GFFN G GGNSG+ N+GSGLSGWFNT+P GLL GSGYQNYGGL S Sbjct 1118 PGGPGYLNTSATPSSGFFNTGAGGNSGYANNGSGLSGWFNTNPAGLLGGSGYQNYGGLSS 1177 Query 942 GFSNLGSGISGFANTGTLPFAVTSLVSGLANIGNNLSGLF 981 GF NLGSG+SG ANTG LPF+VTSLVSG++NIGNNLSG F Sbjct 1178 GFYNLGSGVSGIANTGVLPFSVTSLVSGVSNIGNNLSGFF 1217 Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 95/245 (39%), Positives = 126/245 (52%), Gaps = 29/245 (11%) Query 455 ITSPDLTLPSLEIPGISVPAFSLPAITLPSL-TIPAVTTPANVTVGAFDLPGLTVPSL-T 512 IT+P++T ++ IP I V F+LP I+ P T P P + +G F LP ++ P T Sbjct 875 ITTPEITTTAITIPSIGVDEFTLPQISTPPFSTDPFTIDP--IGLGGFTLPQISTPPFST 932 Query 513 IPAAMTPANITVGAFDLPGLTVPSL-TIPATTTPANITVGAFNLPQLSIPSVTVPPITI- 570 P + P I +G F LP ++ P T P T P I +G F LPQ+S P + P TI Sbjct 933 DPFTIDP--IGLGGFTLPQISTPPFSTDPFTIDP--IGLGGFTLPQISTPPFSTDPFTID 988 Query 571 PAGTALGAFNLPTLSIPSVTVPPITI-PAGTTVGGFTLPTIHTPLISTPQISI-----GG 624 P G LG F LP +S P + P TI P G +GGFTLP I TP ST +I GG Sbjct 989 PIG--LGGFTLPQISTPPFSTDPFTIDPIG--LGGFTLPQISTPPFSTDPFTIDPIGLGG 1044 Query 625 FSTPGIATQANSGVINLPTFSLNGITITNLVVFIPN-NITALQTNMPGVFP-QIGGFANT 682 F+ P I+T I+ F+++ I + +P NI A TN + P IGGF T Sbjct 1045 FTLPQISTPP----ISTDPFTIDPIAVAGFT--LPQINIPAFTTNEFTIAPIGIGGFT-T 1097 Query 683 PPAFI 687 PP I Sbjct 1098 PPITI 1102 >gi|298525254|ref|ZP_07012663.1| predicted protein [Mycobacterium tuberculosis 94_M4241A] gi|298495048|gb|EFI30342.1| predicted protein [Mycobacterium tuberculosis 94_M4241A] Length=585 Score = 724 bits (1868), Expect = 0.0, Method: Compositional matrix adjust. Identities = 451/586 (77%), Positives = 498/586 (85%), Gaps = 6/586 (1%) Query 1 MHYSVLPPEINSALIFAGAGSGPMLAAASAWDGLATELASAAVSFGSVTAGLVGGSWQGR 60 M++SVLPPEINSALIFAGAG PM AAA+AWDGLA ELASAA SFGSVT+GLVGG+WQG Sbjct 1 MNFSVLPPEINSALIFAGAGPEPMAAAATAWDGLAMELASAAASFGSVTSGLVGGAWQGA 60 Query 61 SSVAMAAAAAPYAGWLAAAATQAEQAATQAQVMVAEFEAVRLAMVQPALVAANRSGLISL 120 SS AMAAAAAPYA WLAAAA QAEQ A QA M+AEFEAV+ A+VQP LVAANR+ L+SL Sbjct 61 SSSAMAAAAAPYAAWLAAAAVQAEQTAAQAAAMIAEFEAVKTAVVQPMLVAANRADLVSL 120 Query 121 VISNLFGQNAPAIAAAEAAYEEMWALDVSAMAAYHSGASAVAVALPAFALPLR----LPA 176 V+SNLFGQNAPAIAA EA YE+MWA DVSAM+AYH+GASA+A AL F+ PL+ LPA Sbjct 121 VMSNLFGQNAPAIAAIEATYEQMWAADVSAMSAYHAGASAIASALSPFSKPLQNLAGLPA 180 Query 177 GLAAGPAAVVTALTTAVGMPTFAGRAIAASLGLANVGGGNLGNANNGLGNIGNANLGNNN 236 LA+G A A+T A G+P AG A +LG+ANVGGGN+GNANNGL NIGNANLGN N Sbjct 181 WLASG--APAAAMTAAAGIPALAGGPTAINLGIANVGGGNVGNANNGLANIGNANLGNYN 238 Query 237 LGSGNFGSFNIGSANLGGNNIGIGNAGANNFGLANLGNLNTGFANAGIGNFGIANTGNNN 296 GSGNFG+ NIGSA+LG NNIG GN G+NN G+ NLGNLNTGFAN G+GNFG NTGNNN Sbjct 239 FGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLGNLNTGFANTGLGNFGFGNTGNNN 298 Query 297 IGNGLTGNNQIGIGGLNSGNGNVGLFNAGSANIGFFNSGNGNFGIGNSGNFSTGLFNPGH 356 IG GLTGNNQIGIGGLNSG GN GLFN+GS N+GFFNSGNGNFGIGNSGNF+TG +N GH Sbjct 299 IGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGNFGIGNSGNFNTGGWNSGH 358 Query 357 GNTGFLNAGSFNTGMFDVGNANTGSFNVGHYNFGAFNPGPSNTGTFNTGGANTGWFNTGS 416 GNTGF NAGSFNTGM DVGNANTGS N G YN G FNPG SNTGTFNTG ANTG+ N G+ Sbjct 359 GNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSNTGTFNTGNANTGFLNAGN 418 Query 417 INTGAFNIGDMNNGLFNTGDMNNGVFYRGVGQGSLQFAITSPDLTLPSLEIPGISVPAFS 476 INTG FNIG MNNGLFNTGDMNNGVFYRGVGQGSLQF+IT+PDLTLP L+IPGISVPAFS Sbjct 419 INTGVFNIGHMNNGLFNTGDMNNGVFYRGVGQGSLQFSITTPDLTLPPLQIPGISVPAFS 478 Query 477 LPAITLPSLTIPAVTTPANVTVGAFDLPGLTVPSLTIPAAMTPANITVGAFDLPGLTVPS 536 LPAITLPSLTIPA TTPAN+TVGAF LPGLT+PSL IPAA TPANITVGAF LPGLT+PS Sbjct 479 LPAITLPSLTIPAATTPANITVGAFSLPGLTLPSLNIPAATTPANITVGAFSLPGLTLPS 538 Query 537 LTIPATTTPANITVGAFNLPQLSIPSVTVPPITIPAGTALGAFNLP 582 L IPA TTPANITVGAF+LP L++PS+ +P T PA +GAF+LP Sbjct 539 LNIPAATTPANITVGAFSLPGLTLPSLNIPAATTPANITVGAFSLP 584 Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 46/112 (42%), Positives = 66/112 (59%), Gaps = 22/112 (19%) Query 530 PGLTVPSLTIPATTTPANITVGAFNLPQLSIPSVTVPPITIPAGT-----ALGAFNLPTL 584 P LT+P L IP + PA S+P++T+P +TIPA T +GAF+LP L Sbjct 460 PDLTLPPLQIPGISVPA-----------FSLPAITLPSLTIPAATTPANITVGAFSLPGL 508 Query 585 SIPSVTVPPITIPAGTTVGGF-----TLPTIHTPLISTP-QISIGGFSTPGI 630 ++PS+ +P T PA TVG F TLP+++ P +TP I++G FS PG+ Sbjct 509 TLPSLNIPAATTPANITVGAFSLPGLTLPSLNIPAATTPANITVGAFSLPGL 560 Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 69/217 (32%), Positives = 103/217 (48%), Gaps = 34/217 (15%) Query 688 NTGTITVGGGQINGVGFSIGAINVTPFTLPNVVIQPWSLGGISVDGFTLPEISTQEFTTP 747 NTG++ G N F+ G+ N F N + G I+ F + ++ F T Sbjct 380 NTGSLNTG--SYNMGDFNPGSSNTGTFNTGNANTGFLNAGNINTGVFNIGHMNNGLFNTG 437 Query 748 ALT--ISPIGVGALSLPDITTQQF--TTPELTIDPITLGGFTLPQLSIPAITTPAFTI-- 801 + + GVG SL QF TTP+LT+ P+ + G ++P S+PAIT P+ TI Sbjct 438 DMNNGVFYRGVGQGSL------QFSITTPDLTLPPLQIPGISVPAFSLPAITLPSLTIPA 491 Query 802 ---------DPIALGGFTLPQIMTPEITTPP-FAIDPIGLSGFTLPQVNIPEITTPEFTI 851 +L G TLP + P TTP + L G TLP +NIP TTP Sbjct 492 ATTPANITVGAFSLPGLTLPSLNIPAATTPANITVGAFSLPGLTLPSLNIPAATTPA--- 548 Query 852 QPVGLAAFTTPALTIASIHLPST------TMGGFAIP 882 + + AF+ P LT+ S+++P+ T+G F++P Sbjct 549 -NITVGAFSLPGLTLPSLNIPAATTPANITVGAFSLP 584 Score = 41.6 bits (96), Expect = 0.84, Method: Compositional matrix adjust. Identities = 26/72 (37%), Positives = 37/72 (52%), Gaps = 11/72 (15%) Query 813 QIMTPEITTPPFAIDPIGLSGFTLPQVNIPEITTPEFTIQPVGLAAFTTPA-LTIASIHL 871 I TP++T PP I I + F+LP + +P +T P A TTPA +T+ + L Sbjct 456 SITTPDLTLPPLQIPGISVPAFSLPAITLPSLTIP----------AATTPANITVGAFSL 505 Query 872 PSTTMGGFAIPA 883 P T+ IPA Sbjct 506 PGLTLPSLNIPA 517 >gi|306793197|ref|ZP_07431499.1| putative PPE family protein [Mycobacterium tuberculosis SUMu005] gi|308338373|gb|EFP27224.1| putative PPE family protein [Mycobacterium tuberculosis SUMu005] Length=576 Score = 715 bits (1845), Expect = 0.0, Method: Compositional matrix adjust. Identities = 446/576 (78%), Positives = 491/576 (86%), Gaps = 6/576 (1%) Query 1 MHYSVLPPEINSALIFAGAGSGPMLAAASAWDGLATELASAAVSFGSVTAGLVGGSWQGR 60 M++SVLPPEINSALIFAGAG PM AAA+AWDGLA ELASAA SFGSVT+GLVGG+WQG Sbjct 1 MNFSVLPPEINSALIFAGAGPEPMAAAATAWDGLAMELASAAASFGSVTSGLVGGAWQGA 60 Query 61 SSVAMAAAAAPYAGWLAAAATQAEQAATQAQVMVAEFEAVRLAMVQPALVAANRSGLISL 120 SS AMAAAAAPYA WLAAAA QAEQ A QA M+AEFEAV+ A+VQP LVAANR+ L+SL Sbjct 61 SSSAMAAAAAPYAAWLAAAAVQAEQTAAQAAAMIAEFEAVKTAVVQPMLVAANRADLVSL 120 Query 121 VISNLFGQNAPAIAAAEAAYEEMWALDVSAMAAYHSGASAVAVALPAFALPLR----LPA 176 V+SNLFGQNAPAIAA EA YE+MWA DVSAM+AYH+GASA+A AL F+ PL+ LPA Sbjct 121 VMSNLFGQNAPAIAAIEATYEQMWAADVSAMSAYHAGASAIASALSPFSKPLQNLAGLPA 180 Query 177 GLAAGPAAVVTALTTAVGMPTFAGRAIAASLGLANVGGGNLGNANNGLGNIGNANLGNNN 236 LA+G A A+T A G+P AG A +LG+ANVGGGN+GNANNGL NIGNANLGN N Sbjct 181 WLASG--APAAAMTAAAGIPALAGGPTAINLGIANVGGGNVGNANNGLANIGNANLGNYN 238 Query 237 LGSGNFGSFNIGSANLGGNNIGIGNAGANNFGLANLGNLNTGFANAGIGNFGIANTGNNN 296 GSGNFG+ NIGSA+LG NNIG GN G+NN G+ NLGNLNTGFAN G+GNFG NTGNNN Sbjct 239 FGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLGNLNTGFANTGLGNFGFGNTGNNN 298 Query 297 IGNGLTGNNQIGIGGLNSGNGNVGLFNAGSANIGFFNSGNGNFGIGNSGNFSTGLFNPGH 356 IG GLTGNNQIGIGGLNSG GN GLFN+GS N+GFFNSGNGNFGIGNSGNF+TG +N GH Sbjct 299 IGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGNFGIGNSGNFNTGGWNSGH 358 Query 357 GNTGFLNAGSFNTGMFDVGNANTGSFNVGHYNFGAFNPGPSNTGTFNTGGANTGWFNTGS 416 GNTGF NAGSFNTGM DVGNANTGS N G YN G FNPG SNTGTFNTG ANTG+ N G+ Sbjct 359 GNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSNTGTFNTGNANTGFLNAGN 418 Query 417 INTGAFNIGDMNNGLFNTGDMNNGVFYRGVGQGSLQFAITSPDLTLPSLEIPGISVPAFS 476 INTG FNIG MNNGLFNTGDMNNGVFYRGVGQGSLQF+IT+PDLTLP L+IPGISVPAFS Sbjct 419 INTGVFNIGHMNNGLFNTGDMNNGVFYRGVGQGSLQFSITTPDLTLPPLQIPGISVPAFS 478 Query 477 LPAITLPSLTIPAVTTPANVTVGAFDLPGLTVPSLTIPAAMTPANITVGAFDLPGLTVPS 536 LPAITLPSLTIPA TTPAN+TVGAF LPGLT+PSL IPAA TPANITVGAF LPGLT+PS Sbjct 479 LPAITLPSLTIPAATTPANITVGAFSLPGLTLPSLNIPAATTPANITVGAFSLPGLTLPS 538 Query 537 LTIPATTTPANITVGAFNLPQLSIPSVTVPPITIPA 572 L IPA TTPANITVGAF+LP L++PS+ +P T PA Sbjct 539 LNIPAATTPANITVGAFSLPGLTLPSLNIPAATTPA 574 Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 51/118 (44%), Positives = 62/118 (53%), Gaps = 8/118 (6%) Query 738 EISTQEFTTPALTISPIGVGALSLPDITTQQFTTP------ELTIDPITLGGFTLPQLSI 791 I+T + T P L I I V A SLP IT T P +T+ +L G TLP L+I Sbjct 456 SITTPDLTLPPLQIPGISVPAFSLPAITLPSLTIPAATTPANITVGAFSLPGLTLPSLNI 515 Query 792 PAITTPA-FTIDPIALGGFTLPQIMTPEITTPP-FAIDPIGLSGFTLPQVNIPEITTP 847 PA TTPA T+ +L G TLP + P TTP + L G TLP +NIP TTP Sbjct 516 PAATTPANITVGAFSLPGLTLPSLNIPAATTPANITVGAFSLPGLTLPSLNIPAATTP 573 Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 46/112 (42%), Positives = 66/112 (59%), Gaps = 22/112 (19%) Query 530 PGLTVPSLTIPATTTPANITVGAFNLPQLSIPSVTVPPITIPAGT-----ALGAFNLPTL 584 P LT+P L IP + PA S+P++T+P +TIPA T +GAF+LP L Sbjct 460 PDLTLPPLQIPGISVPA-----------FSLPAITLPSLTIPAATTPANITVGAFSLPGL 508 Query 585 SIPSVTVPPITIPAGTTVGGF-----TLPTIHTPLISTP-QISIGGFSTPGI 630 ++PS+ +P T PA TVG F TLP+++ P +TP I++G FS PG+ Sbjct 509 TLPSLNIPAATTPANITVGAFSLPGLTLPSLNIPAATTPANITVGAFSLPGL 560 Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 66/204 (33%), Positives = 97/204 (48%), Gaps = 28/204 (13%) Query 688 NTGTITVGGGQINGVGFSIGAINVTPFTLPNVVIQPWSLGGISVDGFTLPEISTQEFTTP 747 NTG++ G N F+ G+ N F N + G I+ F + ++ F T Sbjct 380 NTGSLNTG--SYNMGDFNPGSSNTGTFNTGNANTGFLNAGNINTGVFNIGHMNNGLFNTG 437 Query 748 ALT--ISPIGVGALSLPDITTQQF--TTPELTIDPITLGGFTLPQLSIPAITTPAFTI-- 801 + + GVG SL QF TTP+LT+ P+ + G ++P S+PAIT P+ TI Sbjct 438 DMNNGVFYRGVGQGSL------QFSITTPDLTLPPLQIPGISVPAFSLPAITLPSLTIPA 491 Query 802 ---------DPIALGGFTLPQIMTPEITTPP-FAIDPIGLSGFTLPQVNIPEITTPEFTI 851 +L G TLP + P TTP + L G TLP +NIP TTP Sbjct 492 ATTPANITVGAFSLPGLTLPSLNIPAATTPANITVGAFSLPGLTLPSLNIPAATTPA--- 548 Query 852 QPVGLAAFTTPALTIASIHLPSTT 875 + + AF+ P LT+ S+++P+ T Sbjct 549 -NITVGAFSLPGLTLPSLNIPAAT 571 Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 45/123 (37%), Positives = 67/123 (55%), Gaps = 32/123 (26%) Query 557 QLSI--PSVTVPPITIPAGTALGAFNLPTLSIPSVTVPPITIPAGT-----TVGGF---- 605 Q SI P +T+PP+ IP ++P S+P++T+P +TIPA T TVG F Sbjct 454 QFSITTPDLTLPPLQIPG------ISVPAFSLPAITLPSLTIPAATTPANITVGAFSLPG 507 Query 606 -TLPTIHTPLISTP-QISIGGFSTPGI----------ATQANSGVINLPTFSLNGITITN 653 TLP+++ P +TP I++G FS PG+ T AN I + FSL G+T+ + Sbjct 508 LTLPSLNIPAATTPANITVGAFSLPGLTLPSLNIPAATTPAN---ITVGAFSLPGLTLPS 564 Query 654 LVV 656 L + Sbjct 565 LNI 567 Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust. Identities = 38/104 (37%), Positives = 57/104 (55%), Gaps = 8/104 (7%) Query 703 GFSIGAINVTPFTLPNVVI------QPWSLGGISVDGFTLPEISTQEFTTPA-LTISPIG 755 G S+ A ++ TLP++ I ++G S+ G TLP ++ TTPA +T+ Sbjct 471 GISVPAFSLPAITLPSLTIPAATTPANITVGAFSLPGLTLPSLNIPAATTPANITVGAFS 530 Query 756 VGALSLPDITTQQFTTP-ELTIDPITLGGFTLPQLSIPAITTPA 798 + L+LP + TTP +T+ +L G TLP L+IPA TTPA Sbjct 531 LPGLTLPSLNIPAATTPANITVGAFSLPGLTLPSLNIPAATTPA 574 Score = 41.6 bits (96), Expect = 0.82, Method: Compositional matrix adjust. Identities = 26/72 (37%), Positives = 37/72 (52%), Gaps = 11/72 (15%) Query 813 QIMTPEITTPPFAIDPIGLSGFTLPQVNIPEITTPEFTIQPVGLAAFTTPA-LTIASIHL 871 I TP++T PP I I + F+LP + +P +T P A TTPA +T+ + L Sbjct 456 SITTPDLTLPPLQIPGISVPAFSLPAITLPSLTIP----------AATTPANITVGAFSL 505 Query 872 PSTTMGGFAIPA 883 P T+ IPA Sbjct 506 PGLTLPSLNIPA 517 >gi|306972055|ref|ZP_07484716.1| putative PPE family protein [Mycobacterium tuberculosis SUMu010] gi|308358461|gb|EFP47312.1| putative PPE family protein [Mycobacterium tuberculosis SUMu010] Length=572 Score = 710 bits (1832), Expect = 0.0, Method: Compositional matrix adjust. Identities = 443/573 (78%), Positives = 488/573 (86%), Gaps = 6/573 (1%) Query 1 MHYSVLPPEINSALIFAGAGSGPMLAAASAWDGLATELASAAVSFGSVTAGLVGGSWQGR 60 M++SVLPPEINSALIFAGAG PM AAA+AWDGLA ELASAA SFGSVT+GLVGG+WQG Sbjct 1 MNFSVLPPEINSALIFAGAGPEPMAAAATAWDGLAMELASAAASFGSVTSGLVGGAWQGA 60 Query 61 SSVAMAAAAAPYAGWLAAAATQAEQAATQAQVMVAEFEAVRLAMVQPALVAANRSGLISL 120 SS AMAAAAAPYA WLAAAA QAEQ A QA M+AEFEAV+ A+VQP LVAANR+ L+SL Sbjct 61 SSSAMAAAAAPYAAWLAAAAVQAEQTAAQAAAMIAEFEAVKTAVVQPMLVAANRADLVSL 120 Query 121 VISNLFGQNAPAIAAAEAAYEEMWALDVSAMAAYHSGASAVAVALPAFALPLR----LPA 176 V+SNLFGQNAPAIAA EA YE+MWA DVSAM+AYH+GASA+A AL F+ PL+ LPA Sbjct 121 VMSNLFGQNAPAIAAIEATYEQMWAADVSAMSAYHAGASAIASALSPFSKPLQNLAGLPA 180 Query 177 GLAAGPAAVVTALTTAVGMPTFAGRAIAASLGLANVGGGNLGNANNGLGNIGNANLGNNN 236 LA+G A A+T A G+P AG A +LG+ANVGGGN+GNANNGL NIGNANLGN N Sbjct 181 WLASG--APAAAMTAAAGIPALAGGPTAINLGIANVGGGNVGNANNGLANIGNANLGNYN 238 Query 237 LGSGNFGSFNIGSANLGGNNIGIGNAGANNFGLANLGNLNTGFANAGIGNFGIANTGNNN 296 GSGNFG+ NIGSA+LG NNIG GN G+NN G+ NLGNLNTGFAN G+GNFG NTGNNN Sbjct 239 FGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLGNLNTGFANTGLGNFGFGNTGNNN 298 Query 297 IGNGLTGNNQIGIGGLNSGNGNVGLFNAGSANIGFFNSGNGNFGIGNSGNFSTGLFNPGH 356 IG GLTGNNQIGIGGLNSG GN GLFN+GS N+GFFNSGNGNFGIGNSGNF+TG +N GH Sbjct 299 IGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGNFGIGNSGNFNTGGWNSGH 358 Query 357 GNTGFLNAGSFNTGMFDVGNANTGSFNVGHYNFGAFNPGPSNTGTFNTGGANTGWFNTGS 416 GNTGF NAGSFNTGM DVGNANTGS N G YN G FNPG SNTGTFNTG ANTG+ N G+ Sbjct 359 GNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSNTGTFNTGNANTGFLNAGN 418 Query 417 INTGAFNIGDMNNGLFNTGDMNNGVFYRGVGQGSLQFAITSPDLTLPSLEIPGISVPAFS 476 INTG FNIG MNNGLFNTGDMNNGVFYRGVGQGSLQF+IT+PDLTLP L+IPGISVPAFS Sbjct 419 INTGVFNIGHMNNGLFNTGDMNNGVFYRGVGQGSLQFSITTPDLTLPPLQIPGISVPAFS 478 Query 477 LPAITLPSLTIPAVTTPANVTVGAFDLPGLTVPSLTIPAAMTPANITVGAFDLPGLTVPS 536 LPAITLPSL IPA TTPAN+TVGAF LPGLT+PSL IPAA TPANITVGAF LPGLT+PS Sbjct 479 LPAITLPSLNIPAATTPANITVGAFSLPGLTLPSLNIPAATTPANITVGAFSLPGLTLPS 538 Query 537 LTIPATTTPANITVGAFNLPQLSIPSVTVPPIT 569 L IPA TTPANITVGAF+LP L++PS+ +P T Sbjct 539 LNIPAATTPANITVGAFSLPGLTLPSLNIPAAT 571 Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 65/204 (32%), Positives = 97/204 (48%), Gaps = 28/204 (13%) Query 688 NTGTITVGGGQINGVGFSIGAINVTPFTLPNVVIQPWSLGGISVDGFTLPEISTQEFTTP 747 NTG++ G N F+ G+ N F N + G I+ F + ++ F T Sbjct 380 NTGSLNTG--SYNMGDFNPGSSNTGTFNTGNANTGFLNAGNINTGVFNIGHMNNGLFNTG 437 Query 748 ALT--ISPIGVGALSLPDITTQQF--TTPELTIDPITLGGFTLPQLSIPAITTPAF---- 799 + + GVG SL QF TTP+LT+ P+ + G ++P S+PAIT P+ Sbjct 438 DMNNGVFYRGVGQGSL------QFSITTPDLTLPPLQIPGISVPAFSLPAITLPSLNIPA 491 Query 800 -------TIDPIALGGFTLPQIMTPEITTPP-FAIDPIGLSGFTLPQVNIPEITTPEFTI 851 T+ +L G TLP + P TTP + L G TLP +NIP TTP Sbjct 492 ATTPANITVGAFSLPGLTLPSLNIPAATTPANITVGAFSLPGLTLPSLNIPAATTPA--- 548 Query 852 QPVGLAAFTTPALTIASIHLPSTT 875 + + AF+ P LT+ S+++P+ T Sbjct 549 -NITVGAFSLPGLTLPSLNIPAAT 571 Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 45/112 (41%), Positives = 65/112 (59%), Gaps = 22/112 (19%) Query 530 PGLTVPSLTIPATTTPANITVGAFNLPQLSIPSVTVPPITIPAGT-----ALGAFNLPTL 584 P LT+P L IP + PA S+P++T+P + IPA T +GAF+LP L Sbjct 460 PDLTLPPLQIPGISVPA-----------FSLPAITLPSLNIPAATTPANITVGAFSLPGL 508 Query 585 SIPSVTVPPITIPAGTTVGGF-----TLPTIHTPLISTP-QISIGGFSTPGI 630 ++PS+ +P T PA TVG F TLP+++ P +TP I++G FS PG+ Sbjct 509 TLPSLNIPAATTPANITVGAFSLPGLTLPSLNIPAATTPANITVGAFSLPGL 560 Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 49/117 (42%), Positives = 60/117 (52%), Gaps = 8/117 (6%) Query 738 EISTQEFTTPALTISPIGVGALSLPDITTQQFTTP------ELTIDPITLGGFTLPQLSI 791 I+T + T P L I I V A SLP IT P +T+ +L G TLP L+I Sbjct 456 SITTPDLTLPPLQIPGISVPAFSLPAITLPSLNIPAATTPANITVGAFSLPGLTLPSLNI 515 Query 792 PAITTPA-FTIDPIALGGFTLPQIMTPEITTPP-FAIDPIGLSGFTLPQVNIPEITT 846 PA TTPA T+ +L G TLP + P TTP + L G TLP +NIP TT Sbjct 516 PAATTPANITVGAFSLPGLTLPSLNIPAATTPANITVGAFSLPGLTLPSLNIPAATT 572 Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust. Identities = 44/123 (36%), Positives = 66/123 (54%), Gaps = 32/123 (26%) Query 557 QLSI--PSVTVPPITIPAGTALGAFNLPTLSIPSVTVPPITIPAGT-----TVGGF---- 605 Q SI P +T+PP+ IP ++P S+P++T+P + IPA T TVG F Sbjct 454 QFSITTPDLTLPPLQIPG------ISVPAFSLPAITLPSLNIPAATTPANITVGAFSLPG 507 Query 606 -TLPTIHTPLISTP-QISIGGFSTPGI----------ATQANSGVINLPTFSLNGITITN 653 TLP+++ P +TP I++G FS PG+ T AN I + FSL G+T+ + Sbjct 508 LTLPSLNIPAATTPANITVGAFSLPGLTLPSLNIPAATTPAN---ITVGAFSLPGLTLPS 564 Query 654 LVV 656 L + Sbjct 565 LNI 567 Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust. Identities = 36/102 (36%), Positives = 55/102 (54%), Gaps = 8/102 (7%) Query 703 GFSIGAINVTPFTLPNVVI------QPWSLGGISVDGFTLPEISTQEFTTPA-LTISPIG 755 G S+ A ++ TLP++ I ++G S+ G TLP ++ TTPA +T+ Sbjct 471 GISVPAFSLPAITLPSLNIPAATTPANITVGAFSLPGLTLPSLNIPAATTPANITVGAFS 530 Query 756 VGALSLPDITTQQFTTP-ELTIDPITLGGFTLPQLSIPAITT 796 + L+LP + TTP +T+ +L G TLP L+IPA TT Sbjct 531 LPGLTLPSLNIPAATTPANITVGAFSLPGLTLPSLNIPAATT 572 Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust. Identities = 25/72 (35%), Positives = 36/72 (50%), Gaps = 11/72 (15%) Query 813 QIMTPEITTPPFAIDPIGLSGFTLPQVNIPEITTPEFTIQPVGLAAFTTPA-LTIASIHL 871 I TP++T PP I I + F+LP + +P + P A TTPA +T+ + L Sbjct 456 SITTPDLTLPPLQIPGISVPAFSLPAITLPSLNIP----------AATTPANITVGAFSL 505 Query 872 PSTTMGGFAIPA 883 P T+ IPA Sbjct 506 PGLTLPSLNIPA 517 >gi|307084344|ref|ZP_07493457.1| putative PPE family protein [Mycobacterium tuberculosis SUMu012] gi|308366041|gb|EFP54892.1| putative PPE family protein [Mycobacterium tuberculosis SUMu012] Length=565 Score = 705 bits (1819), Expect = 0.0, Method: Compositional matrix adjust. Identities = 441/567 (78%), Positives = 485/567 (86%), Gaps = 6/567 (1%) Query 1 MHYSVLPPEINSALIFAGAGSGPMLAAASAWDGLATELASAAVSFGSVTAGLVGGSWQGR 60 M++SVLPPEINSALIFAGAG PM AAA+AWDGLA ELASAA SFGSVT+GLVGG+WQG Sbjct 1 MNFSVLPPEINSALIFAGAGPEPMAAAATAWDGLAMELASAAASFGSVTSGLVGGAWQGA 60 Query 61 SSVAMAAAAAPYAGWLAAAATQAEQAATQAQVMVAEFEAVRLAMVQPALVAANRSGLISL 120 SS AMAAAAAPYA WLAAAA QAEQ A QA M+AEFEAV+ A+VQP LVAANR+ L+SL Sbjct 61 SSSAMAAAAAPYAAWLAAAAVQAEQTAAQAAAMIAEFEAVKTAVVQPMLVAANRADLVSL 120 Query 121 VISNLFGQNAPAIAAAEAAYEEMWALDVSAMAAYHSGASAVAVALPAFALPLR----LPA 176 V+SNLFGQNAPAIAA EA YE+MWA DVSAM+AYH+GASA+A AL F+ PL+ LPA Sbjct 121 VMSNLFGQNAPAIAAIEATYEQMWAADVSAMSAYHAGASAIASALSPFSKPLQNLAGLPA 180 Query 177 GLAAGPAAVVTALTTAVGMPTFAGRAIAASLGLANVGGGNLGNANNGLGNIGNANLGNNN 236 LA+G A A+T A G+P AG A +LG+ANVGGGN+GNANNGL NIGNANLGN N Sbjct 181 WLASG--APAAAMTAAAGIPALAGGPTAINLGIANVGGGNVGNANNGLANIGNANLGNYN 238 Query 237 LGSGNFGSFNIGSANLGGNNIGIGNAGANNFGLANLGNLNTGFANAGIGNFGIANTGNNN 296 GSGNFG+ NIGSA+LG NNIG GN G+NN G+ NLGNLNTGFAN G+GNFG NTGNNN Sbjct 239 FGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLGNLNTGFANTGLGNFGFGNTGNNN 298 Query 297 IGNGLTGNNQIGIGGLNSGNGNVGLFNAGSANIGFFNSGNGNFGIGNSGNFSTGLFNPGH 356 IG GLTGNNQIGIGGLNSG GN GLFN+GS N+GFFNSGNGNFGIGNSGNF+TG +N GH Sbjct 299 IGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGNFGIGNSGNFNTGGWNSGH 358 Query 357 GNTGFLNAGSFNTGMFDVGNANTGSFNVGHYNFGAFNPGPSNTGTFNTGGANTGWFNTGS 416 GNTGF NAGSFNTGM DVGNANTGS N G YN G FNPG SNTGTFNTG ANTG+ N G+ Sbjct 359 GNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSNTGTFNTGNANTGFLNAGN 418 Query 417 INTGAFNIGDMNNGLFNTGDMNNGVFYRGVGQGSLQFAITSPDLTLPSLEIPGISVPAFS 476 INTG FNIG MNNGLFNTGDMNNGVFYRGVGQGSLQF+IT+PDLTLP L+IPGISVPAFS Sbjct 419 INTGVFNIGHMNNGLFNTGDMNNGVFYRGVGQGSLQFSITTPDLTLPPLQIPGISVPAFS 478 Query 477 LPAITLPSLTIPAVTTPANVTVGAFDLPGLTVPSLTIPAAMTPANITVGAFDLPGLTVPS 536 LPAITLPSL IPA TTPAN+TVGAF LPGLT+PSL IPAA TPANITVGAF LPGLT+PS Sbjct 479 LPAITLPSLNIPAATTPANITVGAFSLPGLTLPSLNIPAATTPANITVGAFSLPGLTLPS 538 Query 537 LTIPATTTPANITVGAFNLPQLSIPSV 563 L IPA TTPANITVGAF+LP L++PS+ Sbjct 539 LNIPAATTPANITVGAFSLPGLTLPSL 565 Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 109/349 (32%), Positives = 157/349 (45%), Gaps = 56/349 (16%) Query 296 NIGNGLTGNNQIGIGGLNSGNGNVGLFNAGSANIGFFNSGNGNFGIGNSGNFSTGLFNPG 355 NIGN GN G G N GN N+G + G+ NIGF N G+ N G+GN GN +TG N G Sbjct 228 NIGNANLGNYNFGSG--NFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLGNLNTGFANTG 285 Query 356 HGNTGFLNAGSFNTGMFDVGNANTGSFNVGHYNFGAFNPGPSNTGTFNTGGANTGWFNTG 415 GN GF N G+ N G+ GN G G N+G N G FN+G Sbjct 286 LGNFGFGNTGNNNIGIGLTGNNQIG------------------IGGLNSGTGNFGLFNSG 327 Query 416 SINTGAFNIGDMNNGLFNTGDMNNGVFYRGVGQGSLQFAITSPDLTLPSLEIPGISVPAF 475 S N G FN G+ N G+ N+G+ N G + G G+ F + L++ + + Sbjct 328 SGNVGFFNSGNGNFGIGNSGNFNTGGWNS--GHGNTGF-FNAGSFNTGMLDVGNANTGSL 384 Query 476 SLPAITLPSLTIPAVTTPANVTVGAFDLPGLTVPSLTIPAAMTPANITVGAFDLPGLTVP 535 + + + P + G F+ + NI G F++ + Sbjct 385 NTGSYNMGDFN------PGSSNTGTFNTGNANT------GFLNAGNINTGVFNIGHMNNG 432 Query 536 SLTIPATTTPANIT-VGAFNLPQLSI--PSVTVPPITIPAGTALGAFNLPTLSIPSVTVP 592 VG +L Q SI P +T+PP+ IP ++P S+P++T+P Sbjct 433 LFNTGDMNNGVFYRGVGQGSL-QFSITTPDLTLPPLQIPG------ISVPAFSLPAITLP 485 Query 593 PITIPAGT-----TVGGF-----TLPTIHTPLISTP-QISIGGFSTPGI 630 + IPA T TVG F TLP+++ P +TP I++G FS PG+ Sbjct 486 SLNIPAATTPANITVGAFSLPGLTLPSLNIPAATTPANITVGAFSLPGL 534 Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 63/198 (32%), Positives = 92/198 (47%), Gaps = 28/198 (14%) Query 688 NTGTITVGGGQINGVGFSIGAINVTPFTLPNVVIQPWSLGGISVDGFTLPEISTQEFTTP 747 NTG++ G N F+ G+ N F N + G I+ F + ++ F T Sbjct 380 NTGSLNTG--SYNMGDFNPGSSNTGTFNTGNANTGFLNAGNINTGVFNIGHMNNGLFNTG 437 Query 748 ALT--ISPIGVGALSLPDITTQQF--TTPELTIDPITLGGFTLPQLSIPAITTPAF---- 799 + + GVG SL QF TTP+LT+ P+ + G ++P S+PAIT P+ Sbjct 438 DMNNGVFYRGVGQGSL------QFSITTPDLTLPPLQIPGISVPAFSLPAITLPSLNIPA 491 Query 800 -------TIDPIALGGFTLPQIMTPEITTPP-FAIDPIGLSGFTLPQVNIPEITTPEFTI 851 T+ +L G TLP + P TTP + L G TLP +NIP TTP Sbjct 492 ATTPANITVGAFSLPGLTLPSLNIPAATTPANITVGAFSLPGLTLPSLNIPAATTPA--- 548 Query 852 QPVGLAAFTTPALTIASI 869 + + AF+ P LT+ S+ Sbjct 549 -NITVGAFSLPGLTLPSL 565 Score = 45.4 bits (106), Expect = 0.046, Method: Compositional matrix adjust. Identities = 25/77 (33%), Positives = 43/77 (56%), Gaps = 7/77 (9%) Query 813 QIMTPEITTPPFAIDPIGLSGFTLPQVNIPEITTPEFTI-QPVGLAAFTTPALTIASIHL 871 I TP++T PP I I + F+LP + +P + P T + + AF+ P LT+ S+++ Sbjct 456 SITTPDLTLPPLQIPGISVPAFSLPAITLPSLNIPAATTPANITVGAFSLPGLTLPSLNI 515 Query 872 PST------TMGGFAIP 882 P+ T+G F++P Sbjct 516 PAATTPANITVGAFSLP 532 >gi|323719734|gb|EGB28849.1| PPE family protein [Mycobacterium tuberculosis CDC1551A] Length=557 Score = 698 bits (1801), Expect = 0.0, Method: Compositional matrix adjust. Identities = 438/559 (79%), Positives = 479/559 (86%), Gaps = 6/559 (1%) Query 1 MHYSVLPPEINSALIFAGAGSGPMLAAASAWDGLATELASAAVSFGSVTAGLVGGSWQGR 60 M++SVLPPEINSALIFAGAG PM AAA+AWDGLA ELASAA SFGSVT+GLVGG+WQG Sbjct 1 MNFSVLPPEINSALIFAGAGPEPMAAAATAWDGLAMELASAAASFGSVTSGLVGGAWQGA 60 Query 61 SSVAMAAAAAPYAGWLAAAATQAEQAATQAQVMVAEFEAVRLAMVQPALVAANRSGLISL 120 SS AMAAAAAPYA WLAAAA QAEQ A QA M+AEFEAV+ A+VQP LVAANR+ L+SL Sbjct 61 SSSAMAAAAAPYAAWLAAAAVQAEQTAAQAAAMIAEFEAVKTAVVQPMLVAANRADLVSL 120 Query 121 VISNLFGQNAPAIAAAEAAYEEMWALDVSAMAAYHSGASAVAVALPAFALPLR----LPA 176 V+SNLFGQNAPAIAA EA YE+MWA DVSAM+AYH+GASA+A AL F+ PL+ LPA Sbjct 121 VMSNLFGQNAPAIAAIEATYEQMWAADVSAMSAYHAGASAIASALSPFSKPLQNLAGLPA 180 Query 177 GLAAGPAAVVTALTTAVGMPTFAGRAIAASLGLANVGGGNLGNANNGLGNIGNANLGNNN 236 LA+G A A+T A G+P AG A +LG+ANVGGGN+GNANNGL NIGNANLGN N Sbjct 181 WLASG--APAAAMTAAAGIPALAGGPTAINLGIANVGGGNVGNANNGLANIGNANLGNYN 238 Query 237 LGSGNFGSFNIGSANLGGNNIGIGNAGANNFGLANLGNLNTGFANAGIGNFGIANTGNNN 296 GSGNFG+ NIGSA+LG NNIG GN G+NN G+ NLGNLNTGFAN G+GNFG NTGNNN Sbjct 239 FGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLGNLNTGFANTGLGNFGFGNTGNNN 298 Query 297 IGNGLTGNNQIGIGGLNSGNGNVGLFNAGSANIGFFNSGNGNFGIGNSGNFSTGLFNPGH 356 IG GLTGNNQIGIGGLNSG GN GLFN+GS N+GFFNSGNGNFGIGNSGNF+TG +N GH Sbjct 299 IGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGNFGIGNSGNFNTGGWNSGH 358 Query 357 GNTGFLNAGSFNTGMFDVGNANTGSFNVGHYNFGAFNPGPSNTGTFNTGGANTGWFNTGS 416 GNTGF NAGSFNTGM DVGNANTGS N G YN G FNPG SNTGTFNTG ANTG+ N G+ Sbjct 359 GNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSNTGTFNTGNANTGFLNAGN 418 Query 417 INTGAFNIGDMNNGLFNTGDMNNGVFYRGVGQGSLQFAITSPDLTLPSLEIPGISVPAFS 476 INTG FNIG MNNGLFNTGDMNNGVFYRGVGQGSLQF+IT+PDLTLP L+IPGISVPAFS Sbjct 419 INTGVFNIGHMNNGLFNTGDMNNGVFYRGVGQGSLQFSITTPDLTLPPLQIPGISVPAFS 478 Query 477 LPAITLPSLTIPAVTTPANVTVGAFDLPGLTVPSLTIPAAMTPANITVGAFDLPGLTVPS 536 LPAITLPSLTIPA TTPAN+TVGAF LPGLT+PSL IPAA TPANITVGAF LPGLT+PS Sbjct 479 LPAITLPSLTIPAATTPANITVGAFSLPGLTLPSLNIPAATTPANITVGAFSLPGLTLPS 538 Query 537 LTIPATTTPANITVGAFNL 555 L IPA TTPANITVGAF+L Sbjct 539 LNIPAATTPANITVGAFSL 557 Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 110/349 (32%), Positives = 158/349 (46%), Gaps = 56/349 (16%) Query 296 NIGNGLTGNNQIGIGGLNSGNGNVGLFNAGSANIGFFNSGNGNFGIGNSGNFSTGLFNPG 355 NIGN GN G G N GN N+G + G+ NIGF N G+ N G+GN GN +TG N G Sbjct 228 NIGNANLGNYNFGSG--NFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLGNLNTGFANTG 285 Query 356 HGNTGFLNAGSFNTGMFDVGNANTGSFNVGHYNFGAFNPGPSNTGTFNTGGANTGWFNTG 415 GN GF N G+ N G+ GN G G N+G N G FN+G Sbjct 286 LGNFGFGNTGNNNIGIGLTGNNQIG------------------IGGLNSGTGNFGLFNSG 327 Query 416 SINTGAFNIGDMNNGLFNTGDMNNGVFYRGVGQGSLQFAITSPDLTLPSLEIPGISVPAF 475 S N G FN G+ N G+ N+G+ N G + G G+ F + L++ + + Sbjct 328 SGNVGFFNSGNGNFGIGNSGNFNTGGWNS--GHGNTGF-FNAGSFNTGMLDVGNANTGSL 384 Query 476 SLPAITLPSLTIPAVTTPANVTVGAFDLPGLTVPSLTIPAAMTPANITVGAFDLPGLTVP 535 + + + P + G F+ + NI G F++ + Sbjct 385 NTGSYNMGDFN------PGSSNTGTFNTGNANT------GFLNAGNINTGVFNIGHMNNG 432 Query 536 SLTIPATTTPANIT-VGAFNLPQLSI--PSVTVPPITIPAGTALGAFNLPTLSIPSVTVP 592 VG +L Q SI P +T+PP+ IP ++P S+P++T+P Sbjct 433 LFNTGDMNNGVFYRGVGQGSL-QFSITTPDLTLPPLQIPG------ISVPAFSLPAITLP 485 Query 593 PITIPAGT-----TVGGF-----TLPTIHTPLISTP-QISIGGFSTPGI 630 +TIPA T TVG F TLP+++ P +TP I++G FS PG+ Sbjct 486 SLTIPAATTPANITVGAFSLPGLTLPSLNIPAATTPANITVGAFSLPGL 534 Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 61/193 (32%), Positives = 90/193 (47%), Gaps = 32/193 (16%) Query 688 NTGTITVGGGQINGVGFSIGAINVTPFTLPNVVIQPWSLGGISVDGFTLPEISTQEFTTP 747 NTG++ G N F+ G+ N F N + G I+ F + ++ F T Sbjct 380 NTGSLNTG--SYNMGDFNPGSSNTGTFNTGNANTGFLNAGNINTGVFNIGHMNNGLFNTG 437 Query 748 ALT--ISPIGVGALSLPDITTQQF--TTPELTIDPITLGGFTLPQLSIPAITTPAFTIDP 803 + + GVG SL QF TTP+LT+ P+ + G ++P S+PAIT P+ TI Sbjct 438 DMNNGVFYRGVGQGSL------QFSITTPDLTLPPLQIPGISVPAFSLPAITLPSLTI-- 489 Query 804 IALGGFTLPQIMTPEITTPP-FAIDPIGLSGFTLPQVNIPEITTPEFTIQPVGLAAFTTP 862 P TTP + L G TLP +NIP TTP + + AF+ P Sbjct 490 -------------PAATTPANITVGAFSLPGLTLPSLNIPAATTPA----NITVGAFSLP 532 Query 863 ALTIASIHLPSTT 875 LT+ S+++P+ T Sbjct 533 GLTLPSLNIPAAT 545 Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 52/145 (36%), Positives = 70/145 (49%), Gaps = 26/145 (17%) Query 687 INTGTITVGGGQINGVGFSIGAINVTPF-------------TLPNVVIQPWSLGGISVDG 733 INTG +G +N F+ G +N F T P++ + P + GISV Sbjct 419 INTGVFNIG--HMNNGLFNTGDMNNGVFYRGVGQGSLQFSITTPDLTLPPLQIPGISVPA 476 Query 734 FTLPEISTQEFTTPALTI-SPIGVGALSLPDITTQQFTTP------ELTIDPITLGGFTL 786 F+LP I+ T PA T + I VGA SLP +T P +T+ +L G TL Sbjct 477 FSLPAITLPSLTIPAATTPANITVGAFSLPGLTLPSLNIPAATTPANITVGAFSLPGLTL 536 Query 787 PQLSIPAITTPAFTIDPIALGGFTL 811 P L+IPA TTPA I +G F+L Sbjct 537 PSLNIPAATTPA----NITVGAFSL 557 Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust. Identities = 26/77 (34%), Positives = 44/77 (58%), Gaps = 7/77 (9%) Query 813 QIMTPEITTPPFAIDPIGLSGFTLPQVNIPEITTPEFTI-QPVGLAAFTTPALTIASIHL 871 I TP++T PP I I + F+LP + +P +T P T + + AF+ P LT+ S+++ Sbjct 456 SITTPDLTLPPLQIPGISVPAFSLPAITLPSLTIPAATTPANITVGAFSLPGLTLPSLNI 515 Query 872 PST------TMGGFAIP 882 P+ T+G F++P Sbjct 516 PAATTPANITVGAFSLP 532 >gi|306788863|ref|ZP_07427185.1| putative PPE family protein [Mycobacterium tuberculosis SUMu004] gi|308334582|gb|EFP23433.1| putative PPE family protein [Mycobacterium tuberculosis SUMu004] Length=554 Score = 694 bits (1792), Expect = 0.0, Method: Compositional matrix adjust. Identities = 436/556 (79%), Positives = 476/556 (86%), Gaps = 6/556 (1%) Query 1 MHYSVLPPEINSALIFAGAGSGPMLAAASAWDGLATELASAAVSFGSVTAGLVGGSWQGR 60 M++SVLPPEINSALIFAGAG PM AAA+AWDGLA ELASAA SFGSVT+GLVGG+WQG Sbjct 1 MNFSVLPPEINSALIFAGAGPEPMAAAATAWDGLAMELASAAASFGSVTSGLVGGAWQGA 60 Query 61 SSVAMAAAAAPYAGWLAAAATQAEQAATQAQVMVAEFEAVRLAMVQPALVAANRSGLISL 120 SS AMAAAAAPYA WLAAAA QAEQ A QA M+AEFEAV+ A+VQP LVAANR+ L+SL Sbjct 61 SSSAMAAAAAPYAAWLAAAAVQAEQTAAQAAAMIAEFEAVKTAVVQPMLVAANRADLVSL 120 Query 121 VISNLFGQNAPAIAAAEAAYEEMWALDVSAMAAYHSGASAVAVALPAFALPLR----LPA 176 V+SNLFGQNAPAIAA EA YE+MWA DVSAM+AYH+GASA+A AL F+ PL+ LPA Sbjct 121 VMSNLFGQNAPAIAAIEATYEQMWAADVSAMSAYHAGASAIASALSPFSKPLQNLAGLPA 180 Query 177 GLAAGPAAVVTALTTAVGMPTFAGRAIAASLGLANVGGGNLGNANNGLGNIGNANLGNNN 236 LA+G A A+T A G+P AG A +LG+ANVGGGN+GNANNGL NIGNANLGN N Sbjct 181 WLASG--APAAAMTAAAGIPALAGGPTAINLGIANVGGGNVGNANNGLANIGNANLGNYN 238 Query 237 LGSGNFGSFNIGSANLGGNNIGIGNAGANNFGLANLGNLNTGFANAGIGNFGIANTGNNN 296 GSGNFG+ NIGSA+LG NNIG GN G+NN G+ NLGNLNTGFAN G+GNFG NTGNNN Sbjct 239 FGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLGNLNTGFANTGLGNFGFGNTGNNN 298 Query 297 IGNGLTGNNQIGIGGLNSGNGNVGLFNAGSANIGFFNSGNGNFGIGNSGNFSTGLFNPGH 356 IG GLTGNNQIGIGGLNSG GN GLFN+GS N+GFFNSGNGNFGIGNSGNF+TG +N GH Sbjct 299 IGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGNFGIGNSGNFNTGGWNSGH 358 Query 357 GNTGFLNAGSFNTGMFDVGNANTGSFNVGHYNFGAFNPGPSNTGTFNTGGANTGWFNTGS 416 GNTGF NAGSFNTGM DVGNANTGS N G YN G FNPG SNTGTFNTG ANTG+ N G+ Sbjct 359 GNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSNTGTFNTGNANTGFLNAGN 418 Query 417 INTGAFNIGDMNNGLFNTGDMNNGVFYRGVGQGSLQFAITSPDLTLPSLEIPGISVPAFS 476 INTG FNIG MNNGLFNTGDMNNGVFYRGVGQGSLQF+IT+PDLTLP L+IPGISVPAFS Sbjct 419 INTGVFNIGHMNNGLFNTGDMNNGVFYRGVGQGSLQFSITTPDLTLPPLQIPGISVPAFS 478 Query 477 LPAITLPSLTIPAVTTPANVTVGAFDLPGLTVPSLTIPAAMTPANITVGAFDLPGLTVPS 536 LPAITLPSLTIPA TTPAN+TVGAF LPGLT+PSL IPAA TPANITVGAF LPGLT+PS Sbjct 479 LPAITLPSLTIPAATTPANITVGAFSLPGLTLPSLNIPAATTPANITVGAFSLPGLTLPS 538 Query 537 LTIPATTTPANITVGA 552 L IPA TTPANITVGA Sbjct 539 LNIPAATTPANITVGA 554 Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 61/193 (32%), Positives = 90/193 (47%), Gaps = 32/193 (16%) Query 688 NTGTITVGGGQINGVGFSIGAINVTPFTLPNVVIQPWSLGGISVDGFTLPEISTQEFTTP 747 NTG++ G N F+ G+ N F N + G I+ F + ++ F T Sbjct 380 NTGSLNTG--SYNMGDFNPGSSNTGTFNTGNANTGFLNAGNINTGVFNIGHMNNGLFNTG 437 Query 748 ALT--ISPIGVGALSLPDITTQQF--TTPELTIDPITLGGFTLPQLSIPAITTPAFTIDP 803 + + GVG SL QF TTP+LT+ P+ + G ++P S+PAIT P+ TI Sbjct 438 DMNNGVFYRGVGQGSL------QFSITTPDLTLPPLQIPGISVPAFSLPAITLPSLTI-- 489 Query 804 IALGGFTLPQIMTPEITTPP-FAIDPIGLSGFTLPQVNIPEITTPEFTIQPVGLAAFTTP 862 P TTP + L G TLP +NIP TTP + + AF+ P Sbjct 490 -------------PAATTPANITVGAFSLPGLTLPSLNIPAATTPA----NITVGAFSLP 532 Query 863 ALTIASIHLPSTT 875 LT+ S+++P+ T Sbjct 533 GLTLPSLNIPAAT 545 Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 48/132 (37%), Positives = 64/132 (49%), Gaps = 22/132 (16%) Query 687 INTGTITVGGGQINGVGFSIGAINVTPF-------------TLPNVVIQPWSLGGISVDG 733 INTG +G +N F+ G +N F T P++ + P + GISV Sbjct 419 INTGVFNIG--HMNNGLFNTGDMNNGVFYRGVGQGSLQFSITTPDLTLPPLQIPGISVPA 476 Query 734 FTLPEISTQEFTTPALTI-SPIGVGALSLPDITTQQFTTP------ELTIDPITLGGFTL 786 F+LP I+ T PA T + I VGA SLP +T P +T+ +L G TL Sbjct 477 FSLPAITLPSLTIPAATTPANITVGAFSLPGLTLPSLNIPAATTPANITVGAFSLPGLTL 536 Query 787 PQLSIPAITTPA 798 P L+IPA TTPA Sbjct 537 PSLNIPAATTPA 548 Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust. Identities = 26/77 (34%), Positives = 44/77 (58%), Gaps = 7/77 (9%) Query 813 QIMTPEITTPPFAIDPIGLSGFTLPQVNIPEITTPEFTI-QPVGLAAFTTPALTIASIHL 871 I TP++T PP I I + F+LP + +P +T P T + + AF+ P LT+ S+++ Sbjct 456 SITTPDLTLPPLQIPGISVPAFSLPAITLPSLTIPAATTPANITVGAFSLPGLTLPSLNI 515 Query 872 PST------TMGGFAIP 882 P+ T+G F++P Sbjct 516 PAATTPANITVGAFSLP 532 >gi|306803461|ref|ZP_07440129.1| putative PPE family protein [Mycobacterium tuberculosis SUMu008] gi|308349871|gb|EFP38722.1| putative PPE family protein [Mycobacterium tuberculosis SUMu008] Length=552 Score = 691 bits (1783), Expect = 0.0, Method: Compositional matrix adjust. Identities = 434/554 (79%), Positives = 474/554 (86%), Gaps = 6/554 (1%) Query 1 MHYSVLPPEINSALIFAGAGSGPMLAAASAWDGLATELASAAVSFGSVTAGLVGGSWQGR 60 M++SVLPPEINSALIFAGAG PM AAA+AWDGLA ELASAA SFGSVT+GLVGG+WQG Sbjct 1 MNFSVLPPEINSALIFAGAGPEPMAAAATAWDGLAMELASAAASFGSVTSGLVGGAWQGA 60 Query 61 SSVAMAAAAAPYAGWLAAAATQAEQAATQAQVMVAEFEAVRLAMVQPALVAANRSGLISL 120 SS AMAAAAAPYA WLAAAA QAEQ A QA M+AEFEAV+ A+VQP LVAANR+ L+SL Sbjct 61 SSSAMAAAAAPYAAWLAAAAVQAEQTAAQAAAMIAEFEAVKTAVVQPMLVAANRADLVSL 120 Query 121 VISNLFGQNAPAIAAAEAAYEEMWALDVSAMAAYHSGASAVAVALPAFALPLR----LPA 176 V+SNLFGQNAPAIAA EA YE+MWA DVSAM+AYH+GASA+A AL F+ PL+ LPA Sbjct 121 VMSNLFGQNAPAIAAIEATYEQMWAADVSAMSAYHAGASAIASALSPFSKPLQNLAGLPA 180 Query 177 GLAAGPAAVVTALTTAVGMPTFAGRAIAASLGLANVGGGNLGNANNGLGNIGNANLGNNN 236 LA+G A A+T A G+P AG A +LG+ANVGGGN+GNANNGL NIGNANLGN N Sbjct 181 WLASG--APAAAMTAAAGIPALAGGPTAINLGIANVGGGNVGNANNGLANIGNANLGNYN 238 Query 237 LGSGNFGSFNIGSANLGGNNIGIGNAGANNFGLANLGNLNTGFANAGIGNFGIANTGNNN 296 GSGNFG+ NIGSA+LG NNIG GN G+NN G+ NLGNLNTGFAN G+GNFG NTGNNN Sbjct 239 FGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLGNLNTGFANTGLGNFGFGNTGNNN 298 Query 297 IGNGLTGNNQIGIGGLNSGNGNVGLFNAGSANIGFFNSGNGNFGIGNSGNFSTGLFNPGH 356 IG GLTGNNQIGIGGLNSG GN GLFN+GS N+GFFNSGNGNFGIGNSGNF+TG +N GH Sbjct 299 IGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGNFGIGNSGNFNTGGWNSGH 358 Query 357 GNTGFLNAGSFNTGMFDVGNANTGSFNVGHYNFGAFNPGPSNTGTFNTGGANTGWFNTGS 416 GNTGF NAGSFNTGM DVGNANTGS N G YN G FNPG SNTGTFNTG ANTG+ N G+ Sbjct 359 GNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSNTGTFNTGNANTGFLNAGN 418 Query 417 INTGAFNIGDMNNGLFNTGDMNNGVFYRGVGQGSLQFAITSPDLTLPSLEIPGISVPAFS 476 INTG FNIG MNNGLFNTGDMNNGVFYRGVGQGSLQF+IT+PDLTLP L+IPGISVPAFS Sbjct 419 INTGVFNIGHMNNGLFNTGDMNNGVFYRGVGQGSLQFSITTPDLTLPPLQIPGISVPAFS 478 Query 477 LPAITLPSLTIPAVTTPANVTVGAFDLPGLTVPSLTIPAAMTPANITVGAFDLPGLTVPS 536 LPAITLPSLTIPA TTPAN+TVGAF LPGLT+PSL IPAA TPANITVGAF LPGLT+PS Sbjct 479 LPAITLPSLTIPAATTPANITVGAFSLPGLTLPSLNIPAATTPANITVGAFSLPGLTLPS 538 Query 537 LTIPATTTPANITV 550 L IPA TTPANITV Sbjct 539 LNIPAATTPANITV 552 Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 61/193 (32%), Positives = 90/193 (47%), Gaps = 32/193 (16%) Query 688 NTGTITVGGGQINGVGFSIGAINVTPFTLPNVVIQPWSLGGISVDGFTLPEISTQEFTTP 747 NTG++ G N F+ G+ N F N + G I+ F + ++ F T Sbjct 380 NTGSLNTG--SYNMGDFNPGSSNTGTFNTGNANTGFLNAGNINTGVFNIGHMNNGLFNTG 437 Query 748 ALT--ISPIGVGALSLPDITTQQF--TTPELTIDPITLGGFTLPQLSIPAITTPAFTIDP 803 + + GVG SL QF TTP+LT+ P+ + G ++P S+PAIT P+ TI Sbjct 438 DMNNGVFYRGVGQGSL------QFSITTPDLTLPPLQIPGISVPAFSLPAITLPSLTI-- 489 Query 804 IALGGFTLPQIMTPEITTPP-FAIDPIGLSGFTLPQVNIPEITTPEFTIQPVGLAAFTTP 862 P TTP + L G TLP +NIP TTP + + AF+ P Sbjct 490 -------------PAATTPANITVGAFSLPGLTLPSLNIPAATTPA----NITVGAFSLP 532 Query 863 ALTIASIHLPSTT 875 LT+ S+++P+ T Sbjct 533 GLTLPSLNIPAAT 545 Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 48/132 (37%), Positives = 64/132 (49%), Gaps = 22/132 (16%) Query 687 INTGTITVGGGQINGVGFSIGAINVTPF-------------TLPNVVIQPWSLGGISVDG 733 INTG +G +N F+ G +N F T P++ + P + GISV Sbjct 419 INTGVFNIG--HMNNGLFNTGDMNNGVFYRGVGQGSLQFSITTPDLTLPPLQIPGISVPA 476 Query 734 FTLPEISTQEFTTPALTI-SPIGVGALSLPDITTQQFTTP------ELTIDPITLGGFTL 786 F+LP I+ T PA T + I VGA SLP +T P +T+ +L G TL Sbjct 477 FSLPAITLPSLTIPAATTPANITVGAFSLPGLTLPSLNIPAATTPANITVGAFSLPGLTL 536 Query 787 PQLSIPAITTPA 798 P L+IPA TTPA Sbjct 537 PSLNIPAATTPA 548 Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust. Identities = 26/77 (34%), Positives = 44/77 (58%), Gaps = 7/77 (9%) Query 813 QIMTPEITTPPFAIDPIGLSGFTLPQVNIPEITTPEFTI-QPVGLAAFTTPALTIASIHL 871 I TP++T PP I I + F+LP + +P +T P T + + AF+ P LT+ S+++ Sbjct 456 SITTPDLTLPPLQIPGISVPAFSLPAITLPSLTIPAATTPANITVGAFSLPGLTLPSLNI 515 Query 872 PST------TMGGFAIP 882 P+ T+G F++P Sbjct 516 PAATTPANITVGAFSLP 532 >gi|308375671|ref|ZP_07444707.2| LOW QUALITY PROTEIN: putative PPE family protein [Mycobacterium tuberculosis SUMu007] gi|308345567|gb|EFP34418.1| LOW QUALITY PROTEIN: putative PPE family protein [Mycobacterium tuberculosis SUMu007] Length=551 Score = 689 bits (1779), Expect = 0.0, Method: Compositional matrix adjust. Identities = 433/553 (79%), Positives = 473/553 (86%), Gaps = 6/553 (1%) Query 1 MHYSVLPPEINSALIFAGAGSGPMLAAASAWDGLATELASAAVSFGSVTAGLVGGSWQGR 60 M++SVLPPEINSALIFAGAG PM AAA+AWDGLA ELASAA SFGSVT+GLVGG+WQG Sbjct 1 MNFSVLPPEINSALIFAGAGPEPMAAAATAWDGLAMELASAAASFGSVTSGLVGGAWQGA 60 Query 61 SSVAMAAAAAPYAGWLAAAATQAEQAATQAQVMVAEFEAVRLAMVQPALVAANRSGLISL 120 SS AMAAAAAPYA WLAAAA QAEQ A QA M+AEFEAV+ A+VQP LVAANR+ L+SL Sbjct 61 SSSAMAAAAAPYAAWLAAAAVQAEQTAAQAAAMIAEFEAVKTAVVQPMLVAANRADLVSL 120 Query 121 VISNLFGQNAPAIAAAEAAYEEMWALDVSAMAAYHSGASAVAVALPAFALPLR----LPA 176 V+SNLFGQNAPAIAA EA YE+MWA DVSAM+AYH+GASA+A AL F+ PL+ LPA Sbjct 121 VMSNLFGQNAPAIAAIEATYEQMWAADVSAMSAYHAGASAIASALSPFSKPLQNLAGLPA 180 Query 177 GLAAGPAAVVTALTTAVGMPTFAGRAIAASLGLANVGGGNLGNANNGLGNIGNANLGNNN 236 LA+G A A+T A G+P AG A +LG+ANVGGGN+GNANNGL NIGNANLGN N Sbjct 181 WLASG--APAAAMTAAAGIPALAGGPTAINLGIANVGGGNVGNANNGLANIGNANLGNYN 238 Query 237 LGSGNFGSFNIGSANLGGNNIGIGNAGANNFGLANLGNLNTGFANAGIGNFGIANTGNNN 296 GSGNFG+ NIGSA+LG NNIG GN G+NN G+ NLGNLNTGFAN G+GNFG NTGNNN Sbjct 239 FGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLGNLNTGFANTGLGNFGFGNTGNNN 298 Query 297 IGNGLTGNNQIGIGGLNSGNGNVGLFNAGSANIGFFNSGNGNFGIGNSGNFSTGLFNPGH 356 IG GLTGNNQIGIGGLNSG GN GLFN+GS N+GFFNSGNGNFGIGNSGNF+TG +N GH Sbjct 299 IGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGNFGIGNSGNFNTGGWNSGH 358 Query 357 GNTGFLNAGSFNTGMFDVGNANTGSFNVGHYNFGAFNPGPSNTGTFNTGGANTGWFNTGS 416 GNTGF NAGSFNTGM DVGNANTGS N G YN G FNPG SNTGTFNTG ANTG+ N G+ Sbjct 359 GNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSNTGTFNTGNANTGFLNAGN 418 Query 417 INTGAFNIGDMNNGLFNTGDMNNGVFYRGVGQGSLQFAITSPDLTLPSLEIPGISVPAFS 476 INTG FNIG MNNGLFNTGDMNNGVFYRGVGQGSLQF+IT+PDLTLP L+IPGISVPAFS Sbjct 419 INTGVFNIGHMNNGLFNTGDMNNGVFYRGVGQGSLQFSITTPDLTLPPLQIPGISVPAFS 478 Query 477 LPAITLPSLTIPAVTTPANVTVGAFDLPGLTVPSLTIPAAMTPANITVGAFDLPGLTVPS 536 LPAITLPSLTIPA TTPAN+TVGAF LPGLT+PSL IPAA TPANITVGAF LPGLT+PS Sbjct 479 LPAITLPSLTIPAATTPANITVGAFSLPGLTLPSLNIPAATTPANITVGAFSLPGLTLPS 538 Query 537 LTIPATTTPANIT 549 L IPA TTPANIT Sbjct 539 LNIPAATTPANIT 551 Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 61/193 (32%), Positives = 90/193 (47%), Gaps = 32/193 (16%) Query 688 NTGTITVGGGQINGVGFSIGAINVTPFTLPNVVIQPWSLGGISVDGFTLPEISTQEFTTP 747 NTG++ G N F+ G+ N F N + G I+ F + ++ F T Sbjct 380 NTGSLNTG--SYNMGDFNPGSSNTGTFNTGNANTGFLNAGNINTGVFNIGHMNNGLFNTG 437 Query 748 ALT--ISPIGVGALSLPDITTQQF--TTPELTIDPITLGGFTLPQLSIPAITTPAFTIDP 803 + + GVG SL QF TTP+LT+ P+ + G ++P S+PAIT P+ TI Sbjct 438 DMNNGVFYRGVGQGSL------QFSITTPDLTLPPLQIPGISVPAFSLPAITLPSLTI-- 489 Query 804 IALGGFTLPQIMTPEITTPP-FAIDPIGLSGFTLPQVNIPEITTPEFTIQPVGLAAFTTP 862 P TTP + L G TLP +NIP TTP + + AF+ P Sbjct 490 -------------PAATTPANITVGAFSLPGLTLPSLNIPAATTPA----NITVGAFSLP 532 Query 863 ALTIASIHLPSTT 875 LT+ S+++P+ T Sbjct 533 GLTLPSLNIPAAT 545 Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 48/132 (37%), Positives = 64/132 (49%), Gaps = 22/132 (16%) Query 687 INTGTITVGGGQINGVGFSIGAINVTPF-------------TLPNVVIQPWSLGGISVDG 733 INTG +G +N F+ G +N F T P++ + P + GISV Sbjct 419 INTGVFNIG--HMNNGLFNTGDMNNGVFYRGVGQGSLQFSITTPDLTLPPLQIPGISVPA 476 Query 734 FTLPEISTQEFTTPALTI-SPIGVGALSLPDITTQQFTTP------ELTIDPITLGGFTL 786 F+LP I+ T PA T + I VGA SLP +T P +T+ +L G TL Sbjct 477 FSLPAITLPSLTIPAATTPANITVGAFSLPGLTLPSLNIPAATTPANITVGAFSLPGLTL 536 Query 787 PQLSIPAITTPA 798 P L+IPA TTPA Sbjct 537 PSLNIPAATTPA 548 Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust. Identities = 26/77 (34%), Positives = 44/77 (58%), Gaps = 7/77 (9%) Query 813 QIMTPEITTPPFAIDPIGLSGFTLPQVNIPEITTPEFTI-QPVGLAAFTTPALTIASIHL 871 I TP++T PP I I + F+LP + +P +T P T + + AF+ P LT+ S+++ Sbjct 456 SITTPDLTLPPLQIPGISVPAFSLPAITLPSLTIPAATTPANITVGAFSLPGLTLPSLNI 515 Query 872 PST------TMGGFAIP 882 P+ T+G F++P Sbjct 516 PAATTPANITVGAFSLP 532 >gi|306797578|ref|ZP_07435880.1| putative PPE family protein [Mycobacterium tuberculosis SUMu006] gi|308342080|gb|EFP30931.1| putative PPE family protein [Mycobacterium tuberculosis SUMu006] Length=547 Score = 683 bits (1762), Expect = 0.0, Method: Compositional matrix adjust. Identities = 429/549 (79%), Positives = 469/549 (86%), Gaps = 6/549 (1%) Query 1 MHYSVLPPEINSALIFAGAGSGPMLAAASAWDGLATELASAAVSFGSVTAGLVGGSWQGR 60 M++SVLPPEINSALIFAGAG PM AAA+AWDGLA ELASAA SFGSVT+GLVGG+WQG Sbjct 1 MNFSVLPPEINSALIFAGAGPEPMAAAATAWDGLAMELASAAASFGSVTSGLVGGAWQGA 60 Query 61 SSVAMAAAAAPYAGWLAAAATQAEQAATQAQVMVAEFEAVRLAMVQPALVAANRSGLISL 120 SS AMAAAAAPYA WLAAAA QAEQ A QA M+AEFEAV+ A+VQP LVAANR+ L+SL Sbjct 61 SSSAMAAAAAPYAAWLAAAAVQAEQTAAQAAAMIAEFEAVKTAVVQPMLVAANRADLVSL 120 Query 121 VISNLFGQNAPAIAAAEAAYEEMWALDVSAMAAYHSGASAVAVALPAFALPLR----LPA 176 V+SNLFGQNAPAIAA EA YE+MWA DVSAM+AYH+GASA+A AL F+ PL+ LPA Sbjct 121 VMSNLFGQNAPAIAAIEATYEQMWAADVSAMSAYHAGASAIASALSPFSKPLQNLAGLPA 180 Query 177 GLAAGPAAVVTALTTAVGMPTFAGRAIAASLGLANVGGGNLGNANNGLGNIGNANLGNNN 236 LA+G A A+T A G+P AG A +LG+ANVGGGN+GNANNGL NIGNANLGN N Sbjct 181 WLASG--APAAAMTAAAGIPALAGGPTAINLGIANVGGGNVGNANNGLANIGNANLGNYN 238 Query 237 LGSGNFGSFNIGSANLGGNNIGIGNAGANNFGLANLGNLNTGFANAGIGNFGIANTGNNN 296 GSGNFG+ NIGSA+LG NNIG GN G+NN G+ NLGNLNTGFAN G+GNFG NTGNNN Sbjct 239 FGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLGNLNTGFANTGLGNFGFGNTGNNN 298 Query 297 IGNGLTGNNQIGIGGLNSGNGNVGLFNAGSANIGFFNSGNGNFGIGNSGNFSTGLFNPGH 356 IG GLTGNNQIGIGGLNSG GN GLFN+GS N+GFFNSGNGNFGIGNSGNF+TG +N GH Sbjct 299 IGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGNFGIGNSGNFNTGGWNSGH 358 Query 357 GNTGFLNAGSFNTGMFDVGNANTGSFNVGHYNFGAFNPGPSNTGTFNTGGANTGWFNTGS 416 GNTGF NAGSFNTGM DVGNANTGS N G YN G FNPG SNTGTFNTG ANTG+ N G+ Sbjct 359 GNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSNTGTFNTGNANTGFLNAGN 418 Query 417 INTGAFNIGDMNNGLFNTGDMNNGVFYRGVGQGSLQFAITSPDLTLPSLEIPGISVPAFS 476 INTG FNIG MNNGLFNTGDMNNGVFYRGVGQGSLQF+IT+PDLTLP L+IPGISVPAFS Sbjct 419 INTGVFNIGHMNNGLFNTGDMNNGVFYRGVGQGSLQFSITTPDLTLPPLQIPGISVPAFS 478 Query 477 LPAITLPSLTIPAVTTPANVTVGAFDLPGLTVPSLTIPAAMTPANITVGAFDLPGLTVPS 536 LPAITLPSLTIPA TTPAN+TVGAF LPGLT+PSL IPAA TPANITVGAF LPGLT+PS Sbjct 479 LPAITLPSLTIPAATTPANITVGAFSLPGLTLPSLNIPAATTPANITVGAFSLPGLTLPS 538 Query 537 LTIPATTTP 545 L IPA TTP Sbjct 539 LNIPAATTP 547 Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 61/193 (32%), Positives = 90/193 (47%), Gaps = 32/193 (16%) Query 688 NTGTITVGGGQINGVGFSIGAINVTPFTLPNVVIQPWSLGGISVDGFTLPEISTQEFTTP 747 NTG++ G N F+ G+ N F N + G I+ F + ++ F T Sbjct 380 NTGSLNTG--SYNMGDFNPGSSNTGTFNTGNANTGFLNAGNINTGVFNIGHMNNGLFNTG 437 Query 748 ALT--ISPIGVGALSLPDITTQQF--TTPELTIDPITLGGFTLPQLSIPAITTPAFTIDP 803 + + GVG SL QF TTP+LT+ P+ + G ++P S+PAIT P+ TI Sbjct 438 DMNNGVFYRGVGQGSL------QFSITTPDLTLPPLQIPGISVPAFSLPAITLPSLTI-- 489 Query 804 IALGGFTLPQIMTPEITTPP-FAIDPIGLSGFTLPQVNIPEITTPEFTIQPVGLAAFTTP 862 P TTP + L G TLP +NIP TTP + + AF+ P Sbjct 490 -------------PAATTPANITVGAFSLPGLTLPSLNIPAATTPA----NITVGAFSLP 532 Query 863 ALTIASIHLPSTT 875 LT+ S+++P+ T Sbjct 533 GLTLPSLNIPAAT 545 Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust. Identities = 26/77 (34%), Positives = 44/77 (58%), Gaps = 7/77 (9%) Query 813 QIMTPEITTPPFAIDPIGLSGFTLPQVNIPEITTPEFTI-QPVGLAAFTTPALTIASIHL 871 I TP++T PP I I + F+LP + +P +T P T + + AF+ P LT+ S+++ Sbjct 456 SITTPDLTLPPLQIPGISVPAFSLPAITLPSLTIPAATTPANITVGAFSLPGLTLPSLNI 515 Query 872 PST------TMGGFAIP 882 P+ T+G F++P Sbjct 516 PAATTPANITVGAFSLP 532 >gi|306784498|ref|ZP_07422820.1| PPE family protein [Mycobacterium tuberculosis SUMu003] gi|308330757|gb|EFP19608.1| PPE family protein [Mycobacterium tuberculosis SUMu003] Length=543 Score = 678 bits (1749), Expect = 0.0, Method: Compositional matrix adjust. Identities = 426/545 (79%), Positives = 466/545 (86%), Gaps = 6/545 (1%) Query 1 MHYSVLPPEINSALIFAGAGSGPMLAAASAWDGLATELASAAVSFGSVTAGLVGGSWQGR 60 M++SVLPPEINSALIFAGAG PM AAA+AWDGLA ELASAA SFGSVT+GLVGG+WQG Sbjct 1 MNFSVLPPEINSALIFAGAGPEPMAAAATAWDGLAMELASAAASFGSVTSGLVGGAWQGA 60 Query 61 SSVAMAAAAAPYAGWLAAAATQAEQAATQAQVMVAEFEAVRLAMVQPALVAANRSGLISL 120 SS AMAAAAAPYA WLAAAA QAEQ A QA M+AEFEAV+ A+VQP LVAANR+ L+SL Sbjct 61 SSSAMAAAAAPYAAWLAAAAVQAEQTAAQAAAMIAEFEAVKTAVVQPMLVAANRADLVSL 120 Query 121 VISNLFGQNAPAIAAAEAAYEEMWALDVSAMAAYHSGASAVAVALPAFALPLR----LPA 176 V+SNLFGQNAPAIAA EA YE+MWA DVSAM+AYH+GASA+A AL F+ PL+ LPA Sbjct 121 VMSNLFGQNAPAIAAIEATYEQMWAADVSAMSAYHAGASAIASALSPFSKPLQNLAGLPA 180 Query 177 GLAAGPAAVVTALTTAVGMPTFAGRAIAASLGLANVGGGNLGNANNGLGNIGNANLGNNN 236 LA+G A A+T A G+P AG A +LG+ANVGGGN+GNANNGL NIGNANLGN N Sbjct 181 WLASG--APAAAMTAAAGIPALAGGPTAINLGIANVGGGNVGNANNGLANIGNANLGNYN 238 Query 237 LGSGNFGSFNIGSANLGGNNIGIGNAGANNFGLANLGNLNTGFANAGIGNFGIANTGNNN 296 GSGNFG+ NIGSA+LG NNIG GN G+NN G+ NLGNLNTGFAN G+GNFG NTGNNN Sbjct 239 FGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLGNLNTGFANTGLGNFGFGNTGNNN 298 Query 297 IGNGLTGNNQIGIGGLNSGNGNVGLFNAGSANIGFFNSGNGNFGIGNSGNFSTGLFNPGH 356 IG GLTGNNQIGIGGLNSG GN GLFN+GS N+GFFNSGNGNFGIGNSGNF+TG +N GH Sbjct 299 IGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGNFGIGNSGNFNTGGWNSGH 358 Query 357 GNTGFLNAGSFNTGMFDVGNANTGSFNVGHYNFGAFNPGPSNTGTFNTGGANTGWFNTGS 416 GNTGF NAGSFNTGM DVGNANTGS N G YN G FNPG SNTGTFNTG ANTG+ N G+ Sbjct 359 GNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSNTGTFNTGNANTGFLNAGN 418 Query 417 INTGAFNIGDMNNGLFNTGDMNNGVFYRGVGQGSLQFAITSPDLTLPSLEIPGISVPAFS 476 INTG FNIG MNNGLFNTGDMNNGVFYRGVGQGSLQF+IT+PDLTLP L+IPGISVPAFS Sbjct 419 INTGVFNIGHMNNGLFNTGDMNNGVFYRGVGQGSLQFSITTPDLTLPPLQIPGISVPAFS 478 Query 477 LPAITLPSLTIPAVTTPANVTVGAFDLPGLTVPSLTIPAAMTPANITVGAFDLPGLTVPS 536 LPAITLPSLTIPA TTPAN+TVGAF LPGLT+PSL IPAA TPANITVGAF LPGLT+PS Sbjct 479 LPAITLPSLTIPAATTPANITVGAFSLPGLTLPSLNIPAATTPANITVGAFSLPGLTLPS 538 Query 537 LTIPA 541 L IPA Sbjct 539 LNIPA 543 Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 60/191 (32%), Positives = 89/191 (47%), Gaps = 32/191 (16%) Query 688 NTGTITVGGGQINGVGFSIGAINVTPFTLPNVVIQPWSLGGISVDGFTLPEISTQEFTTP 747 NTG++ G N F+ G+ N F N + G I+ F + ++ F T Sbjct 380 NTGSLNTG--SYNMGDFNPGSSNTGTFNTGNANTGFLNAGNINTGVFNIGHMNNGLFNTG 437 Query 748 ALT--ISPIGVGALSLPDITTQQF--TTPELTIDPITLGGFTLPQLSIPAITTPAFTIDP 803 + + GVG SL QF TTP+LT+ P+ + G ++P S+PAIT P+ TI Sbjct 438 DMNNGVFYRGVGQGSL------QFSITTPDLTLPPLQIPGISVPAFSLPAITLPSLTI-- 489 Query 804 IALGGFTLPQIMTPEITTPP-FAIDPIGLSGFTLPQVNIPEITTPEFTIQPVGLAAFTTP 862 P TTP + L G TLP +NIP TTP + + AF+ P Sbjct 490 -------------PAATTPANITVGAFSLPGLTLPSLNIPAATTPA----NITVGAFSLP 532 Query 863 ALTIASIHLPS 873 LT+ S+++P+ Sbjct 533 GLTLPSLNIPA 543 Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 45/127 (36%), Positives = 63/127 (50%), Gaps = 17/127 (13%) Query 687 INTGTITVGGGQINGVGFSIGAINVTPF-------------TLPNVVIQPWSLGGISVDG 733 INTG +G +N F+ G +N F T P++ + P + GISV Sbjct 419 INTGVFNIG--HMNNGLFNTGDMNNGVFYRGVGQGSLQFSITTPDLTLPPLQIPGISVPA 476 Query 734 FTLPEISTQEFTTPALTI-SPIGVGALSLPDITTQQFTTPELTIDP-ITLGGFTLPQLSI 791 F+LP I+ T PA T + I VGA SLP +T P T IT+G F+LP L++ Sbjct 477 FSLPAITLPSLTIPAATTPANITVGAFSLPGLTLPSLNIPAATTPANITVGAFSLPGLTL 536 Query 792 PAITTPA 798 P++ PA Sbjct 537 PSLNIPA 543 Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust. Identities = 26/77 (34%), Positives = 44/77 (58%), Gaps = 7/77 (9%) Query 813 QIMTPEITTPPFAIDPIGLSGFTLPQVNIPEITTPEFTI-QPVGLAAFTTPALTIASIHL 871 I TP++T PP I I + F+LP + +P +T P T + + AF+ P LT+ S+++ Sbjct 456 SITTPDLTLPPLQIPGISVPAFSLPAITLPSLTIPAATTPANITVGAFSLPGLTLPSLNI 515 Query 872 PST------TMGGFAIP 882 P+ T+G F++P Sbjct 516 PAATTPANITVGAFSLP 532 >gi|289753844|ref|ZP_06513222.1| predicted protein [Mycobacterium tuberculosis EAS054] gi|289694431|gb|EFD61860.1| predicted protein [Mycobacterium tuberculosis EAS054] Length=1012 Score = 667 bits (1720), Expect = 0.0, Method: Compositional matrix adjust. Identities = 485/817 (60%), Positives = 558/817 (69%), Gaps = 105/817 (12%) Query 143 MWALDVSAMAAYHSGASAVAVALPAFALPLR----LPAGLAAGPAAVVTALTTAVGMPTF 198 MWA DVSAM+AYH+GASA+A AL F+ PL+ LPA LA+G A A+T A G+P Sbjct 1 MWAADVSAMSAYHAGASAIASALSPFSKPLQNLAGLPAWLASG--APAAAMTAAAGIPAL 58 Query 199 AGRAIAASLGLANVGGGNLGNANNGLGNIGNANLGNNNLGSGNFGSFNIGSANLGGNNIG 258 AG A +LG+ANVGGGN+GNANNGL NIGNANLGN N GSGNFG+ NIGSA+LG NNIG Sbjct 59 AGGPTAINLGIANVGGGNVGNANNGLANIGNANLGNYNFGSGNFGNSNIGSASLGNNNIG 118 Query 259 IGNAGANNFGLANLGNLNTGFANAGIGNFGIANTGNNNIGNGLTGNNQIGIGGLNSGNGN 318 GN G+NN G+ NLGNLNTGFAN G+GNFG NTGNNNIG GLTGNNQIGIGGLNSG GN Sbjct 119 FGNLGSNNVGVGNLGNLNTGFANTGLGNFGFGNTGNNNIGIGLTGNNQIGIGGLNSGTGN 178 Query 319 VGLFNAGSANIGFFNSGNGNFGIGNSGNFSTGLFNPGHGNTGFLNAGSFNTGMFDVGNAN 378 GLFN+GS N+GFFNSGNGNFGIGNSGNF+TG +N GHGNTGF NAGSFNTGM DVGNAN Sbjct 179 FGLFNSGSGNVGFFNSGNGNFGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNAN 238 Query 379 TGSFNVGHYNFGAFNPGPSNTGTFNTGGANTGWFNTGSINTGAFNIGDMNNGLFNTGDMN 438 TGS N G YN G FNPG SNTGTFNTG ANTG+ N G+INTG FNIG MNNGLFNTGDMN Sbjct 239 TGSLNTGSYNMGDFNPGSSNTGTFNTGNANTGFLNAGNINTGVFNIGHMNNGLFNTGDMN 298 Query 439 NGVFYRGVGQGSLQFAITSPDLTLPSLEIPGISVPAFSLPAITLPSLTIPAVTTPANVTV 498 NGVFYRGVGQGSLQF+IT+PDLTLP L+IPGISVPAFSLPAITLPSLTIPA TTPAN+TV Sbjct 299 NGVFYRGVGQGSLQFSITTPDLTLPPLQIPGISVPAFSLPAITLPSLTIPAATTPANITV 358 Query 499 GAFDLPGLTVPSLTIPAAMTPANITVGAFDLPGLTVPSLTIPATTTPANITVGAFNLPQL 558 GAF LPGLT+PSL IPAA TPANITVGAF LPGLT+PSL IPA TTPANITVGAF+LP L Sbjct 359 GAFSLPGLTLPSLNIPAATTPANITVGAFSLPGLTLPSLNIPAATTPANITVGAFSLPGL 418 Query 559 SIPSVTVPPITIPAGTALGAFNLPTLSIPSVTVPPITIPAGTTVGGF-----TLPTIHTP 613 ++PS+ +P T PA +GAF+LP L++PS+ +P T PA TVG F TLP+++ P Sbjct 419 TLPSLNIPAATTPANITVGAFSLPGLTLPSLNIPAATTPANITVGAFSLPGLTLPSLNIP 478 Query 614 LISTP-QISIGGFSTPGI----------ATQAN--------------------------- 635 +TP I++G FS PG+ T AN Sbjct 479 AATTPANITVGAFSLPGLTLPSLNIPAATTPANITVSGFQLPPLSIPSVAIPPVTVPPIT 538 Query 636 SGVINLPTFSLNGITITNLVVFIPNNITALQTNMPGV----------------FPQIGG- 678 G NLP + +TI L IP IT ++P + P IG Sbjct 539 VGAFNLPPLQIPEVTIPQLT--IPAGITIGGFSLPAIHTQPITVGQIGVGQFGLPSIGWD 596 Query 679 -FANTP----PAF---------INTGTITVGGGQINGVGFSIGAINVTPFTLPNVVIQPW 724 F +TP PAF N + GG ++ F+ GA+ F LP +V+ P+ Sbjct 597 VFLSTPRITVPAFGIPFTLQFQTNVPALQPPGGGLS--TFTNGALIFGEFDLPQLVVHPY 654 Query 725 SLGG---------------------ISVDGFTLPEISTQEFTTPALTISPIGVGALSLPD 763 +L G I+VDGFTLP+I+T TTP I PIGVG +LP Sbjct 655 TLTGPIVIGSFFLPAFNIPGIDVPAINVDGFTLPQITTPAITTPEFAIPPIGVGGFTLPQ 714 Query 764 ITTQQFTTPELTIDPITLGGFTLPQLSIPAITTPAFTIDPIALGGFTLPQIMTPEITTPP 823 ITTQ+ TPELTI+ I +GGFTLPQ++ P ITTP TIDPI L GFTLPQI TP ITTPP Sbjct 715 ITTQEIITPELTINSIGVGGFTLPQITTPPITTPPLTIDPINLTGFTLPQITTPPITTPP 774 Query 824 FAIDPIGLSGFTLPQVNIPEITTPEFTIQPVGLAAFT 860 IDPI L+GFTLPQ+ P ITTP TI P+ L FT Sbjct 775 LTIDPINLTGFTLPQITTPPITTPPLTIDPINLTGFT 811 Score = 340 bits (872), Expect = 8e-91, Method: Compositional matrix adjust. Identities = 325/627 (52%), Positives = 380/627 (61%), Gaps = 121/627 (19%) Query 454 AITSPDLTLPSLEIPG------ISVPAFSLPAITLPSLTIPAVTTPANVTVGAFDLPGLT 507 A + P LTLPSL IP I+V AFSLP +TLPSL IPA TTPAN+TVGAF LPGLT Sbjct 412 AFSLPGLTLPSLNIPAATTPANITVGAFSLPGLTLPSLNIPAATTPANITVGAFSLPGLT 471 Query 508 VPSLTIPAAMTPANITVGAFDLPGLTVPSLTIPATTTPANITVGAFNLPQLSIPSVTVPP 567 +PSL IPAA TPANITVGAF LPGLT+PSL IPA TTPANITV F LP LSIPSV +PP Sbjct 472 LPSLNIPAATTPANITVGAFSLPGLTLPSLNIPAATTPANITVSGFQLPPLSIPSVAIPP 531 Query 568 ITIPAGTALGAFNLPTLSIPSVTVPPITIPAGTTVGGFTLPTIHTP-------------- 613 +T+P T +GAFNLP L IP VT+P +TIPAG T+GGF+LP IHT Sbjct 532 VTVPPIT-VGAFNLPPLQIPEVTIPQLTIPAGITIGGFSLPAIHTQPITVGQIGVGQFGL 590 Query 614 -------LISTPQISIGGFSTP-----------------GIATQANSGVI----NLPTFS 645 +STP+I++ F P G++T N +I +LP Sbjct 591 PSIGWDVFLSTPRITVPAFGIPFTLQFQTNVPALQPPGGGLSTFTNGALIFGEFDLPQLV 650 Query 646 LNGITITNLVV----FIPN-NITALQT---NMPG-VFPQIGGFANTPPAF---------- 686 ++ T+T +V F+P NI + N+ G PQI A T P F Sbjct 651 VHPYTLTGPIVIGSFFLPAFNIPGIDVPAINVDGFTLPQITTPAITTPEFAIPPIGVGGF 710 Query 687 ----INTGTITVGGGQINGVG---FSIGA---------------INVTPFTLPNVVIQPW 724 I T I IN +G F++ IN+T FTLP + P Sbjct 711 TLPQITTQEIITPELTINSIGVGGFTLPQITTPPITTPPLTIDPINLTGFTLPQITTPPI 770 Query 725 SLGG-----ISVDGFTLPEISTQEFTTPALTISPIGVGALSLPDITTQQFTTPELTIDPI 779 + I++ GFTLP+I+T TTP LTI PI + +LP ITT TTP LTIDPI Sbjct 771 TTPPLTIDPINLTGFTLPQITTPPITTPPLTIDPINLTGFTLPQITTPPITTPPLTIDPI 830 Query 780 TLGGFTLPQLSIPAITTPAFTIDPIALGGFTLPQIMTPEITTPPFAIDPIGLSGFTLPQV 839 L GFTLPQ++ P ITTP TIDPI L GFTLPQI TP ITTPP I+PIG+ GFT Sbjct 831 NLTGFTLPQITTPPITTPPLTIDPINLTGFTLPQITTPPITTPPLTIEPIGVGGFT---- 886 Query 840 NIPEITTPEFTIQPVGLAAFTTPALTIASIHLPSTTMGGFAIPAGPGYFNSSATPSLGFF 899 TP LT+ IHLPSTT+G FAIP GPGYFNSS PS GFF Sbjct 887 ---------------------TPPLTVPGIHLPSTTIGAFAIPGGPGYFNSSTAPSSGFF 925 Query 900 NAGIGGNSGFGNSGSGLSGWFNTSPVGLLAGSGYQNYGGLISGFSNLGSGISGFANTGTL 959 N+G GGNSGFGN+GSGLSGWFNT+P GLL GSGYQN+GGL SGFSNLGSG+SGFAN G L Sbjct 926 NSGAGGNSGFGNNGSGLSGWFNTNPAGLLGGSGYQNFGGLSSGFSNLGSGVSGFANRGIL 985 Query 960 PFAVTSLVSGLANIGNNLSGLFFQSTT 986 PF+V S+VSG ANIG NL+G FFQ TT Sbjct 986 PFSVASVVSGFANIGTNLAG-FFQGTT 1011 Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 66/178 (38%), Positives = 87/178 (49%), Gaps = 23/178 (12%) Query 715 TLPNVVIQPWSLGGISVDGFTLPEISTQEFTTPALTI-SPIGVGALSLPDITTQQFTTP- 772 T P++ + P + GISV F+LP I+ T PA T + I VGA SLP +T P Sbjct 316 TTPDLTLPPLQIPGISVPAFSLPAITLPSLTIPAATTPANITVGAFSLPGLTLPSLNIPA 375 Query 773 -----ELTIDPITLGGFTLPQLSIPAITTPA-FTIDPIALGGFTLPQIMTPEITTPP-FA 825 +T+ +L G TLP L+IPA TTPA T+ +L G TLP + P TTP Sbjct 376 ATTPANITVGAFSLPGLTLPSLNIPAATTPANITVGAFSLPGLTLPSLNIPAATTPANIT 435 Query 826 IDPIGLSGFTLPQVNIPEITTPEFTIQPVGLAAFTTPALTIASIHLPSTTMGGFAIPA 883 + L G TLP +NIP TTP +T+ + LP T+ IPA Sbjct 436 VGAFSLPGLTLPSLNIPAATTPA--------------NITVGAFSLPGLTLPSLNIPA 479 Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 44/128 (35%), Positives = 62/128 (49%), Gaps = 16/128 (12%) Query 758 ALSLPDITTQQFTTPELTIDPITLGGFTLPQLSIPAITTPA-FTIDPIALGGFTLPQIMT 816 +++ PD+T P +++ +L TLP L+IPA TTPA T+ +L G TLP + Sbjct 314 SITTPDLTLPPLQIPGISVPAFSLPAITLPSLTIPAATTPANITVGAFSLPGLTLPSLNI 373 Query 817 PEITTPP-FAIDPIGLSGFTLPQVNIPEITTPEFTIQPVGLAAFTTPALTIASIHLPSTT 875 P TTP + L G TLP +NIP TTP +T+ + LP T Sbjct 374 PAATTPANITVGAFSLPGLTLPSLNIPAATTPA--------------NITVGAFSLPGLT 419 Query 876 MGGFAIPA 883 + IPA Sbjct 420 LPSLNIPA 427 >gi|306779763|ref|ZP_07418100.1| PPE family protein [Mycobacterium tuberculosis SUMu002] gi|308327310|gb|EFP16161.1| PPE family protein [Mycobacterium tuberculosis SUMu002] Length=535 Score = 666 bits (1718), Expect = 0.0, Method: Compositional matrix adjust. Identities = 420/537 (79%), Positives = 459/537 (86%), Gaps = 6/537 (1%) Query 1 MHYSVLPPEINSALIFAGAGSGPMLAAASAWDGLATELASAAVSFGSVTAGLVGGSWQGR 60 M++SVLPPEINSALIFAGAG PM AAA+AWDGLA ELASAA SFGSVT+GLVGG+WQG Sbjct 1 MNFSVLPPEINSALIFAGAGPEPMAAAATAWDGLAMELASAAASFGSVTSGLVGGAWQGA 60 Query 61 SSVAMAAAAAPYAGWLAAAATQAEQAATQAQVMVAEFEAVRLAMVQPALVAANRSGLISL 120 SS AMAAAAAPYA WLAAAA QAEQ A QA M+AEFEAV+ A+VQP LVAANR+ L+SL Sbjct 61 SSSAMAAAAAPYAAWLAAAAVQAEQTAAQAAAMIAEFEAVKTAVVQPMLVAANRADLVSL 120 Query 121 VISNLFGQNAPAIAAAEAAYEEMWALDVSAMAAYHSGASAVAVALPAFALPLR----LPA 176 V+SNLFGQNAPAIAA EA YE+MWA DVSAM+AYH+GASA+A AL F+ PL+ LPA Sbjct 121 VMSNLFGQNAPAIAAIEATYEQMWAADVSAMSAYHAGASAIASALSPFSKPLQNLAGLPA 180 Query 177 GLAAGPAAVVTALTTAVGMPTFAGRAIAASLGLANVGGGNLGNANNGLGNIGNANLGNNN 236 LA+G A A+T A G+P AG A +LG+ANVGGGN+GNANNGL NIGNANLGN N Sbjct 181 WLASG--APAAAMTAAAGIPALAGGPTAINLGIANVGGGNVGNANNGLANIGNANLGNYN 238 Query 237 LGSGNFGSFNIGSANLGGNNIGIGNAGANNFGLANLGNLNTGFANAGIGNFGIANTGNNN 296 GSGNFG+ NIGSA+LG NNIG GN G+NN G+ NLGNLNTGFAN G+GNFG NTGNNN Sbjct 239 FGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLGNLNTGFANTGLGNFGFGNTGNNN 298 Query 297 IGNGLTGNNQIGIGGLNSGNGNVGLFNAGSANIGFFNSGNGNFGIGNSGNFSTGLFNPGH 356 IG GLTGNNQIGIGGLNSG GN GLFN+GS N+GFFNSGNGNFGIGNSGNF+TG +N GH Sbjct 299 IGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGNFGIGNSGNFNTGGWNSGH 358 Query 357 GNTGFLNAGSFNTGMFDVGNANTGSFNVGHYNFGAFNPGPSNTGTFNTGGANTGWFNTGS 416 GNTGF NAGSFNTGM DVGNANTGS N G YN G FNPG SNTGTFNTG ANTG+ N G+ Sbjct 359 GNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSNTGTFNTGNANTGFLNAGN 418 Query 417 INTGAFNIGDMNNGLFNTGDMNNGVFYRGVGQGSLQFAITSPDLTLPSLEIPGISVPAFS 476 INTG FNIG MNNGLFNTGDMNNGVFYRGVGQGSLQF+IT+PDLTLP L+IPGISVPAFS Sbjct 419 INTGVFNIGHMNNGLFNTGDMNNGVFYRGVGQGSLQFSITTPDLTLPPLQIPGISVPAFS 478 Query 477 LPAITLPSLTIPAVTTPANVTVGAFDLPGLTVPSLTIPAAMTPANITVGAFDLPGLT 533 LPAITLPSLTIPA TTPAN+TVGAF LPGLT+PSL IPAA TPANITVGAF LPGLT Sbjct 479 LPAITLPSLTIPAATTPANITVGAFSLPGLTLPSLNIPAATTPANITVGAFSLPGLT 535 Lambda K H 0.316 0.135 0.402 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 2456956322856 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40