BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv1919c
Length=154
Score E
Sequences producing significant alignments: (Bits) Value
gi|15841391|ref|NP_336428.1| hypothetical protein MT1970 [Mycoba... 310 5e-83
gi|15609056|ref|NP_216435.1| hypothetical protein Rv1919c [Mycob... 310 7e-83
gi|118618352|ref|YP_906684.1| hypothetical protein MUL_2948 [Myc... 271 2e-71
gi|240170168|ref|ZP_04748827.1| hypothetical protein MkanA1_1270... 262 2e-68
gi|296164950|ref|ZP_06847505.1| conserved hypothetical protein [... 256 5e-67
gi|254822697|ref|ZP_05227698.1| hypothetical protein MintA_22399... 255 1e-66
gi|342859576|ref|ZP_08716229.1| hypothetical protein MCOL_11873 ... 252 2e-65
gi|118466784|ref|YP_881966.1| hypothetical protein MAV_2778 [Myc... 251 3e-65
gi|41407744|ref|NP_960580.1| hypothetical protein MAP1646c [Myco... 249 1e-64
gi|254775258|ref|ZP_05216774.1| hypothetical protein MaviaA2_113... 248 3e-64
gi|15828073|ref|NP_302336.1| hypothetical protein ML1983 [Mycoba... 233 5e-60
gi|300782241|ref|YP_003762532.1| hypothetical protein AMED_0307 ... 174 5e-42
gi|302523623|ref|ZP_07275965.1| conserved hypothetical protein [... 165 3e-39
gi|312194573|ref|YP_004014634.1| polyketide cyclase/dehydrase [F... 127 7e-28
gi|336176851|ref|YP_004582226.1| polyketide cyclase/dehydrase [F... 122 2e-26
gi|331698788|ref|YP_004335027.1| polyketide cyclase/dehydrase [P... 79.7 1e-13
gi|269128419|ref|YP_003301789.1| cyclase/dehydrase [Thermomonosp... 75.9 2e-12
gi|296167249|ref|ZP_06849654.1| conserved hypothetical protein [... 75.9 2e-12
gi|342859685|ref|ZP_08716338.1| hypothetical protein MCOL_12418 ... 73.6 1e-11
gi|340529783|gb|AEK44988.1| hypothetical protein RAM_32575 [Amyc... 68.2 4e-10
gi|300788198|ref|YP_003768489.1| hypothetical protein AMED_6353 ... 68.2 4e-10
gi|330447796|ref|ZP_08311444.1| putative uncharacterized protein... 63.2 1e-08
gi|300785459|ref|YP_003765750.1| hypothetical protein AMED_3562 ... 57.0 9e-07
gi|90577231|ref|ZP_01233042.1| hypothetical protein VAS14_09309 ... 56.6 1e-06
gi|120555067|ref|YP_959418.1| hypothetical protein Maqu_2152 [Ma... 56.2 1e-06
gi|89072418|ref|ZP_01158997.1| hypothetical protein SKA34_06580 ... 56.2 2e-06
gi|311693795|gb|ADP96668.1| conserved hypothetical protein [Mari... 55.5 3e-06
gi|337762645|emb|CCB71353.1| Activator of Hsp90 ATPase-like prot... 54.7 4e-06
gi|255320508|ref|ZP_05361689.1| conserved hypothetical protein [... 54.7 4e-06
gi|149374548|ref|ZP_01892322.1| hypothetical protein MDG893_1088... 53.9 8e-06
gi|54302211|ref|YP_132204.1| hypothetical protein PBPRB0531 [Pho... 53.1 1e-05
gi|90411147|ref|ZP_01219160.1| hypothetical protein P3TCK_06262 ... 51.6 4e-05
gi|158314759|ref|YP_001507267.1| AMP-dependent synthetase and li... 51.2 5e-05
gi|291299607|ref|YP_003510885.1| activator of Hsp90 ATPase 1 fam... 50.8 7e-05
gi|108802095|ref|YP_642292.1| hypothetical protein Mmcs_5132 [My... 49.3 2e-04
gi|332142238|ref|YP_004427976.1| hypothetical protein MADE_10142... 48.9 2e-04
gi|342862206|ref|ZP_08718848.1| hypothetical protein MCOL_25071 ... 48.9 3e-04
gi|311743113|ref|ZP_07716921.1| conserved hypothetical protein [... 48.5 3e-04
gi|169629377|ref|YP_001703026.1| hypothetical protein MAB_2291 [... 47.4 6e-04
gi|342860650|ref|ZP_08717300.1| cyclase/dehydrase [Mycobacterium... 47.0 9e-04
gi|110832939|ref|YP_691798.1| hypothetical protein ABO_0078 [Alc... 47.0 0.001
gi|329938137|ref|ZP_08287588.1| hypothetical protein SGM_3080 [S... 46.6 0.001
gi|254429840|ref|ZP_05043547.1| hypothetical protein ADG881_3070... 46.6 0.001
gi|126641319|ref|YP_001084303.1| hypothetical protein A1S_1273 [... 46.6 0.001
gi|325121670|gb|ADY81193.1| hypothetical protein BDGL_000607 [Ac... 46.2 0.001
gi|260555537|ref|ZP_05827758.1| conserved hypothetical protein [... 46.2 0.002
gi|226952954|ref|ZP_03823418.1| conserved hypothetical protein [... 46.2 0.002
gi|184157599|ref|YP_001845938.1| hypothetical protein ACICU_0127... 46.2 0.002
gi|299770720|ref|YP_003732746.1| hypothetical protein AOLE_12430... 46.2 0.002
gi|293608530|ref|ZP_06690833.1| conserved hypothetical protein [... 45.8 0.002
>gi|15841391|ref|NP_336428.1| hypothetical protein MT1970 [Mycobacterium tuberculosis CDC1551]
gi|13881627|gb|AAK46242.1| hypothetical protein MT1970 [Mycobacterium tuberculosis CDC1551]
Length=161
Score = 310 bits (793), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 154/154 (100%), Positives = 154/154 (100%), Gaps = 0/154 (0%)
Query 1 MSGRKFSFEVTKTSSAPAATLFRLVTDGGNWATWAKPIVAQSSWARRGDPAPGGIGAIRK 60
MSGRKFSFEVTKTSSAPAATLFRLVTDGGNWATWAKPIVAQSSWARRGDPAPGGIGAIRK
Sbjct 8 MSGRKFSFEVTKTSSAPAATLFRLVTDGGNWATWAKPIVAQSSWARRGDPAPGGIGAIRK 67
Query 61 LGMWPVFVQEETVEYEQDRRHVYKLVGARTPVQDYFGEVVLTPNASGGTDLRWSGSFTEK 120
LGMWPVFVQEETVEYEQDRRHVYKLVGARTPVQDYFGEVVLTPNASGGTDLRWSGSFTEK
Sbjct 68 LGMWPVFVQEETVEYEQDRRHVYKLVGARTPVQDYFGEVVLTPNASGGTDLRWSGSFTEK 127
Query 121 VRGTGPVMRAALGGAVRFFAGQLVKAAEREAVRR 154
VRGTGPVMRAALGGAVRFFAGQLVKAAEREAVRR
Sbjct 128 VRGTGPVMRAALGGAVRFFAGQLVKAAEREAVRR 161
>gi|15609056|ref|NP_216435.1| hypothetical protein Rv1919c [Mycobacterium tuberculosis H37Rv]
gi|31793111|ref|NP_855604.1| hypothetical protein Mb1954c [Mycobacterium bovis AF2122/97]
gi|121637824|ref|YP_978047.1| hypothetical protein BCG_1958c [Mycobacterium bovis BCG str.
Pasteur 1173P2]
76 more sequence titles
Length=154
Score = 310 bits (793), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 154/154 (100%), Positives = 154/154 (100%), Gaps = 0/154 (0%)
Query 1 MSGRKFSFEVTKTSSAPAATLFRLVTDGGNWATWAKPIVAQSSWARRGDPAPGGIGAIRK 60
MSGRKFSFEVTKTSSAPAATLFRLVTDGGNWATWAKPIVAQSSWARRGDPAPGGIGAIRK
Sbjct 1 MSGRKFSFEVTKTSSAPAATLFRLVTDGGNWATWAKPIVAQSSWARRGDPAPGGIGAIRK 60
Query 61 LGMWPVFVQEETVEYEQDRRHVYKLVGARTPVQDYFGEVVLTPNASGGTDLRWSGSFTEK 120
LGMWPVFVQEETVEYEQDRRHVYKLVGARTPVQDYFGEVVLTPNASGGTDLRWSGSFTEK
Sbjct 61 LGMWPVFVQEETVEYEQDRRHVYKLVGARTPVQDYFGEVVLTPNASGGTDLRWSGSFTEK 120
Query 121 VRGTGPVMRAALGGAVRFFAGQLVKAAEREAVRR 154
VRGTGPVMRAALGGAVRFFAGQLVKAAEREAVRR
Sbjct 121 VRGTGPVMRAALGGAVRFFAGQLVKAAEREAVRR 154
>gi|118618352|ref|YP_906684.1| hypothetical protein MUL_2948 [Mycobacterium ulcerans Agy99]
gi|183982829|ref|YP_001851120.1| hypothetical protein MMAR_2825 [Mycobacterium marinum M]
gi|118570462|gb|ABL05213.1| conserved protein [Mycobacterium ulcerans Agy99]
gi|183176155|gb|ACC41265.1| conserved protein [Mycobacterium marinum M]
Length=155
Score = 271 bits (694), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 129/151 (86%), Positives = 140/151 (93%), Gaps = 0/151 (0%)
Query 1 MSGRKFSFEVTKTSSAPAATLFRLVTDGGNWATWAKPIVAQSSWARRGDPAPGGIGAIRK 60
MSGRKFSFEVTKTSSAPAATLFRL TDG NWA WAKPIV QSSWAR+GDPAPGG+GAIRK
Sbjct 1 MSGRKFSFEVTKTSSAPAATLFRLATDGANWANWAKPIVMQSSWARQGDPAPGGVGAIRK 60
Query 61 LGMWPVFVQEETVEYEQDRRHVYKLVGARTPVQDYFGEVVLTPNASGGTDLRWSGSFTEK 120
+GMWP+ VQEETVEYEQDRRHVYK+VG+ TP +DY GEVV TPNASGGTD+RWSGSF+E
Sbjct 61 VGMWPMLVQEETVEYEQDRRHVYKMVGSSTPAKDYHGEVVFTPNASGGTDIRWSGSFSEG 120
Query 121 VRGTGPVMRAALGGAVRFFAGQLVKAAEREA 151
VRGTGPVMRAALG AV+FFAG+LVKAAEREA
Sbjct 121 VRGTGPVMRAALGNAVKFFAGRLVKAAEREA 151
>gi|240170168|ref|ZP_04748827.1| hypothetical protein MkanA1_12708 [Mycobacterium kansasii ATCC
12478]
Length=155
Score = 262 bits (669), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 125/151 (83%), Positives = 137/151 (91%), Gaps = 0/151 (0%)
Query 1 MSGRKFSFEVTKTSSAPAATLFRLVTDGGNWATWAKPIVAQSSWARRGDPAPGGIGAIRK 60
M GRKFSFEVTK+SSAPAATLFRLVTDGG W+ WAKPIV QSSWAR+GDPAPGGIGA+RK
Sbjct 1 MPGRKFSFEVTKSSSAPAATLFRLVTDGGRWSEWAKPIVLQSSWARQGDPAPGGIGAVRK 60
Query 61 LGMWPVFVQEETVEYEQDRRHVYKLVGARTPVQDYFGEVVLTPNASGGTDLRWSGSFTEK 120
+GMWPV VQEETVEYEQDRRH Y+L+ RTP +DY EVVLTPNASGGTD+RWSGSFTE
Sbjct 61 VGMWPVLVQEETVEYEQDRRHAYRLIAPRTPAKDYHAEVVLTPNASGGTDIRWSGSFTEG 120
Query 121 VRGTGPVMRAALGGAVRFFAGQLVKAAEREA 151
VRGTGP MRAALGGAV+FFAG+LVKA ERE+
Sbjct 121 VRGTGPAMRAALGGAVKFFAGRLVKAGERES 151
>gi|296164950|ref|ZP_06847505.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295899598|gb|EFG79049.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=155
Score = 256 bits (655), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 122/151 (81%), Positives = 135/151 (90%), Gaps = 0/151 (0%)
Query 1 MSGRKFSFEVTKTSSAPAATLFRLVTDGGNWATWAKPIVAQSSWARRGDPAPGGIGAIRK 60
MSGR +SFE+ +TSSAPAATLFRLVTDG NW+ WAKPIV SSWAR+GDPAPGGIGA+RK
Sbjct 1 MSGRTYSFEINRTSSAPAATLFRLVTDGANWSKWAKPIVVHSSWARQGDPAPGGIGAVRK 60
Query 61 LGMWPVFVQEETVEYEQDRRHVYKLVGARTPVQDYFGEVVLTPNASGGTDLRWSGSFTEK 120
+GMWPV VQEETVEYEQDRRH YKLVG TP +DY GEVV TPN GGTD+RW+GSFTE
Sbjct 61 VGMWPVLVQEETVEYEQDRRHAYKLVGPPTPAKDYSGEVVFTPNPLGGTDIRWTGSFTEG 120
Query 121 VRGTGPVMRAALGGAVRFFAGQLVKAAEREA 151
VRGTGPVMRAA+GGAVRFFAG+LVKAAERE+
Sbjct 121 VRGTGPVMRAAMGGAVRFFAGRLVKAAERES 151
>gi|254822697|ref|ZP_05227698.1| hypothetical protein MintA_22399 [Mycobacterium intracellulare
ATCC 13950]
Length=155
Score = 255 bits (652), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 122/151 (81%), Positives = 136/151 (91%), Gaps = 0/151 (0%)
Query 1 MSGRKFSFEVTKTSSAPAATLFRLVTDGGNWATWAKPIVAQSSWARRGDPAPGGIGAIRK 60
MSGRKFSFE+T+TSSAPA TLFRLV DG NW+ WAKPIV +SSWAR GDPAPGG+GAIRK
Sbjct 1 MSGRKFSFEITRTSSAPAETLFRLVADGANWSQWAKPIVLRSSWAREGDPAPGGVGAIRK 60
Query 61 LGMWPVFVQEETVEYEQDRRHVYKLVGARTPVQDYFGEVVLTPNASGGTDLRWSGSFTEK 120
+GMWPVFVQEETV YE DRRH YKLVG TP +DY GEVV TPNA+GGTD+RW+GSFTE
Sbjct 61 VGMWPVFVQEETVAYEPDRRHAYKLVGPPTPAKDYAGEVVFTPNAAGGTDIRWTGSFTEG 120
Query 121 VRGTGPVMRAALGGAVRFFAGQLVKAAEREA 151
VRGTGPVMRAA+GGAVRFF+G+LVKAAERE+
Sbjct 121 VRGTGPVMRAAMGGAVRFFSGRLVKAAERES 151
>gi|342859576|ref|ZP_08716229.1| hypothetical protein MCOL_11873 [Mycobacterium colombiense CECT
3035]
gi|342132708|gb|EGT85928.1| hypothetical protein MCOL_11873 [Mycobacterium colombiense CECT
3035]
Length=155
Score = 252 bits (643), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 119/151 (79%), Positives = 135/151 (90%), Gaps = 0/151 (0%)
Query 1 MSGRKFSFEVTKTSSAPAATLFRLVTDGGNWATWAKPIVAQSSWARRGDPAPGGIGAIRK 60
M GR FSFE+T+TSSA AT+FRLV DG NW+ WAKPIV SSWAR+GDPAPGG+GAIRK
Sbjct 1 MPGRNFSFEITRTSSASPATVFRLVADGANWSQWAKPIVMHSSWARQGDPAPGGVGAIRK 60
Query 61 LGMWPVFVQEETVEYEQDRRHVYKLVGARTPVQDYFGEVVLTPNASGGTDLRWSGSFTEK 120
+GMWPV+VQEETV YE DRRH YKLVG TPV+DY GEV+LTPNASGGTD+RW+GSFTE
Sbjct 61 VGMWPVYVQEETVAYEPDRRHAYKLVGPATPVKDYAGEVILTPNASGGTDIRWTGSFTEG 120
Query 121 VRGTGPVMRAALGGAVRFFAGQLVKAAEREA 151
VRGTGP+MRAA+GGAVRFFAG+LVKAAERE+
Sbjct 121 VRGTGPLMRAAMGGAVRFFAGRLVKAAERES 151
>gi|118466784|ref|YP_881966.1| hypothetical protein MAV_2778 [Mycobacterium avium 104]
gi|118168071|gb|ABK68968.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=155
Score = 251 bits (640), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 119/151 (79%), Positives = 134/151 (89%), Gaps = 0/151 (0%)
Query 1 MSGRKFSFEVTKTSSAPAATLFRLVTDGGNWATWAKPIVAQSSWARRGDPAPGGIGAIRK 60
M GRKFSFEVT+TSSAPAATLFRLV DG NW+ WAKPIV SSWAR+GDPAPGG+GAIRK
Sbjct 1 MPGRKFSFEVTRTSSAPAATLFRLVADGANWSRWAKPIVLHSSWARQGDPAPGGVGAIRK 60
Query 61 LGMWPVFVQEETVEYEQDRRHVYKLVGARTPVQDYFGEVVLTPNASGGTDLRWSGSFTEK 120
+G+WPV VQEET EYE DRRH YKLVG +P +DY GEVV TPN +GGTD+RW+GSFTE
Sbjct 61 VGLWPVLVQEETTEYEPDRRHAYKLVGPPSPAKDYTGEVVFTPNPAGGTDIRWTGSFTEG 120
Query 121 VRGTGPVMRAALGGAVRFFAGQLVKAAEREA 151
VRGTGP+MRAA+GGAV+FFAG+LVKAAEREA
Sbjct 121 VRGTGPLMRAAMGGAVKFFAGRLVKAAEREA 151
>gi|41407744|ref|NP_960580.1| hypothetical protein MAP1646c [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41396097|gb|AAS03963.1| hypothetical protein MAP_1646c [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|336457404|gb|EGO36413.1| Polyketide cyclase / dehydrase and lipid transport [Mycobacterium
avium subsp. paratuberculosis S397]
Length=155
Score = 249 bits (635), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 118/151 (79%), Positives = 133/151 (89%), Gaps = 0/151 (0%)
Query 1 MSGRKFSFEVTKTSSAPAATLFRLVTDGGNWATWAKPIVAQSSWARRGDPAPGGIGAIRK 60
M GR FSFEVT+TSSAPAATLFRLV DG NW+ WAKPIV SSWAR+GDPAPGG+GAIRK
Sbjct 1 MPGRMFSFEVTRTSSAPAATLFRLVADGANWSRWAKPIVLHSSWARQGDPAPGGVGAIRK 60
Query 61 LGMWPVFVQEETVEYEQDRRHVYKLVGARTPVQDYFGEVVLTPNASGGTDLRWSGSFTEK 120
+G+WPV VQEET EYE DRRH YKLVG +P +DY GEVV TPN +GGTD+RW+GSFTE
Sbjct 61 VGLWPVLVQEETTEYEPDRRHAYKLVGPPSPAKDYTGEVVFTPNPAGGTDIRWTGSFTEG 120
Query 121 VRGTGPVMRAALGGAVRFFAGQLVKAAEREA 151
VRGTGP+MRAA+GGAV+FFAG+LVKAAEREA
Sbjct 121 VRGTGPLMRAAMGGAVKFFAGRLVKAAEREA 151
>gi|254775258|ref|ZP_05216774.1| hypothetical protein MaviaA2_11391 [Mycobacterium avium subsp.
avium ATCC 25291]
Length=155
Score = 248 bits (632), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 118/151 (79%), Positives = 133/151 (89%), Gaps = 0/151 (0%)
Query 1 MSGRKFSFEVTKTSSAPAATLFRLVTDGGNWATWAKPIVAQSSWARRGDPAPGGIGAIRK 60
M GRKFSFEVT+TSSAPAATLFRLV DG NW+ WAKPIV SSWA +GDPAPGG+GAIRK
Sbjct 1 MPGRKFSFEVTRTSSAPAATLFRLVADGANWSRWAKPIVLHSSWAGQGDPAPGGVGAIRK 60
Query 61 LGMWPVFVQEETVEYEQDRRHVYKLVGARTPVQDYFGEVVLTPNASGGTDLRWSGSFTEK 120
+G+WPV VQEET EYE DRRH YKLVG +P +DY GEVV TPN +GGTD+RW+GSFTE
Sbjct 61 VGLWPVLVQEETTEYEPDRRHAYKLVGPPSPAKDYTGEVVFTPNPAGGTDIRWTGSFTEG 120
Query 121 VRGTGPVMRAALGGAVRFFAGQLVKAAEREA 151
VRGTGP+MRAA+GGAV+FFAG+LVKAAEREA
Sbjct 121 VRGTGPLMRAAMGGAVKFFAGRLVKAAEREA 151
>gi|15828073|ref|NP_302336.1| hypothetical protein ML1983 [Mycobacterium leprae TN]
gi|221230550|ref|YP_002503966.1| hypothetical protein MLBr_01983 [Mycobacterium leprae Br4923]
gi|13093627|emb|CAC30938.1| conserved hypothetical protein [Mycobacterium leprae]
gi|219933657|emb|CAR72080.1| conserved hypothetical protein [Mycobacterium leprae Br4923]
Length=155
Score = 233 bits (595), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 110/151 (73%), Positives = 126/151 (84%), Gaps = 0/151 (0%)
Query 1 MSGRKFSFEVTKTSSAPAATLFRLVTDGGNWATWAKPIVAQSSWARRGDPAPGGIGAIRK 60
MS RKFSFEVT+TSSA AA LFRLVTDG NWA WAKPIV QSSWAR GD PGGIGA+RK
Sbjct 1 MSNRKFSFEVTRTSSASAAVLFRLVTDGANWAKWAKPIVLQSSWARLGDLRPGGIGAVRK 60
Query 61 LGMWPVFVQEETVEYEQDRRHVYKLVGARTPVQDYFGEVVLTPNASGGTDLRWSGSFTEK 120
+G+WP+ V+EETVEYEQDRRH+YKL+G P +DY GEV+L PNA+GGT++ WSGSFTE
Sbjct 61 IGIWPILVREETVEYEQDRRHLYKLIGPPNPAKDYLGEVLLAPNAAGGTNIHWSGSFTEN 120
Query 121 VRGTGPVMRAALGGAVRFFAGQLVKAAEREA 151
+ GTGPVMRAAL GAVR +LVK AERE+
Sbjct 121 IPGTGPVMRAALKGAVRCLTVRLVKTAERES 151
>gi|300782241|ref|YP_003762532.1| hypothetical protein AMED_0307 [Amycolatopsis mediterranei U32]
gi|299791755|gb|ADJ42130.1| conserved hypothetical protein [Amycolatopsis mediterranei U32]
gi|340523601|gb|AEK38806.1| hypothetical protein RAM_01555 [Amycolatopsis mediterranei S699]
Length=149
Score = 174 bits (440), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 80/146 (55%), Positives = 105/146 (72%), Gaps = 1/146 (0%)
Query 3 GRKFSFEVTKTSSAPAATLFRLVTDGGNWATWAKPIVAQSSWARRGDPAPGGIGAIRKLG 62
GRK+S+EV +TS+AP LF L DG WA W KP++ Q+ WARRG P G+GA+R++G
Sbjct 2 GRKYSYEVNRTSTAPPEALFALEADGPRWAEWGKPLIVQARWARRGTTEPDGVGAVREVG 61
Query 63 MWPVFVQEETVEYEQDRRHVYKLVGARTPVQDYFGEVVLTPNASGGTDLRWSGSFTEKVR 122
MWPV ++EET+EYE R+HVY G + P++DY EV+ TP GGT LRW+GSFTE V+
Sbjct 62 MWPVLIREETLEYEPGRKHVYAFAGGK-PIKDYRAEVLFTPTDGGGTHLRWTGSFTEPVK 120
Query 123 GTGPVMRAALGGAVRFFAGQLVKAAE 148
GTGP + A L +R F+ +LVKAAE
Sbjct 121 GTGPALAATLRIVIRLFSAKLVKAAE 146
>gi|302523623|ref|ZP_07275965.1| conserved hypothetical protein [Streptomyces sp. AA4]
gi|302432518|gb|EFL04334.1| conserved hypothetical protein [Streptomyces sp. AA4]
Length=148
Score = 165 bits (417), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 84/151 (56%), Positives = 107/151 (71%), Gaps = 3/151 (1%)
Query 1 MSGRKFSFEVTKTSSAPAATLFRLVTDGGNWATWAKPIVAQSSWARRGDPAPGGIGAIRK 60
M+GR++SFEV + S+A LFRL +DG W+TWA+P+V Q+ WA GD GG+GA+R+
Sbjct 1 MAGRRYSFEVNRVSAAAPPVLFRLESDGPRWSTWARPLVWQARWAELGDD--GGVGAVRE 58
Query 61 LGMWPVFVQEETVEYEQDRRHVYKLVGARTPVQDYFGEVVLTPNASGGTDLRWSGSFTEK 120
+G+WPV ++E+TVEY DRRH Y G PV+DY EV TPNA+GGTDLRWSGSFTE
Sbjct 59 VGLWPVLLREKTVEYVPDRRHGYAFDGF-GPVRDYRAEVAFTPNAAGGTDLRWSGSFTEG 117
Query 121 VRGTGPVMRAALGGAVRFFAGQLVKAAEREA 151
+ GTGP AAL G + A +L KA ER A
Sbjct 118 IPGTGPAALAALRGVIGLLATKLAKAGERAA 148
>gi|312194573|ref|YP_004014634.1| polyketide cyclase/dehydrase [Frankia sp. EuI1c]
gi|311225909|gb|ADP78764.1| Polyketide cyclase/dehydrase [Frankia sp. EuI1c]
Length=185
Score = 127 bits (318), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 70/144 (49%), Positives = 86/144 (60%), Gaps = 1/144 (0%)
Query 4 RKFSFEVTKTSSAPAATLFRLVTDGGNWATWAKPIVAQSSWARRGDPAPGGIGAIRKLGM 63
R SF + SSAPA+ +F L+ DGG WA WA P+V +S W R G+PAPGG+GAIR+LG+
Sbjct 28 RAESFGLVVESSAPASAVFALLADGGGWAAWAGPLVPRSRWYRTGNPAPGGVGAIRELGL 87
Query 64 WPVFVQEETVEYEQDRRHVYKLVGARTPVQDYFGEVVLTPNASGGTDLRWSGSFTEKVRG 123
PV +EE +EY RR VY +V PV Y G V L P GGT + W SF RG
Sbjct 88 RPVLSREEILEYVPPRRIVYTIVSG-IPVDGYRGTVELDPLPGGGTRITWRSSFVPTHRG 146
Query 124 TGPVMRAALGGAVRFFAGQLVKAA 147
TGP +R VR A L +AA
Sbjct 147 TGPALRLLGVTIVRSIARHLARAA 170
>gi|336176851|ref|YP_004582226.1| polyketide cyclase/dehydrase [Frankia symbiont of Datisca glomerata]
gi|334857831|gb|AEH08305.1| Polyketide cyclase/dehydrase [Frankia symbiont of Datisca glomerata]
Length=162
Score = 122 bits (306), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 61/139 (44%), Positives = 86/139 (62%), Gaps = 5/139 (3%)
Query 1 MSGRKFSFEVTKTSSAPAATLFRLVTDGGNWATWAKPIVAQSSWARRGDPAPGGIGAIRK 60
MSGR+ + VT+ S A + +F L+ DG W+ WA P++++S W R G P PGG+GA+R+
Sbjct 1 MSGRRRVYVVTQLSPAAPSAVFELLADGAGWSRWAAPLISRSWWEREGTPPPGGVGAVRR 60
Query 61 LGMWPVFVQEETVEYEQDRRHVYKLVGARTPVQDYFGEVVLTPNASGGTDLRWSGSFTEK 120
+G P+ +EE VEY RRH Y++ A P++DY V L P GGT++ W GSF
Sbjct 61 VGRPPLISREEIVEYLPARRHAYRIRSALLPIRDYLATVDLAP-VDGGTEIVWQGSFVPL 119
Query 121 VRGTGPVMRAALGGAVRFF 139
V GTG A L G ++FF
Sbjct 120 VPGTG----ALLAGVLKFF 134
>gi|331698788|ref|YP_004335027.1| polyketide cyclase/dehydrase [Pseudonocardia dioxanivorans CB1190]
gi|326953477|gb|AEA27174.1| Polyketide cyclase/dehydrase [Pseudonocardia dioxanivorans CB1190]
Length=148
Score = 79.7 bits (195), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/129 (39%), Positives = 67/129 (52%), Gaps = 4/129 (3%)
Query 8 FEVTKTSSAPAATLFRLVTDGGNWATWAKPIVAQSSWARRGDPAPGGIGAIRKLGMWPVF 67
+V TS AP + +F L+ D W WA A + R G P P G+GAIR
Sbjct 6 IDVQVTSDAPPSEVFALLHDVTTWPEWAD--FATARLERPGAPDPNGVGAIRAF-TGHAN 62
Query 68 VQEETVEYEQDRRHVYKLVGARTPVQDYFGEVVLTPNASGGTDLRWSGSFTEKVRGTGPV 127
+EE V EQDR Y L+ P++DY +V LTP +SGGT++ W SF KV GT +
Sbjct 63 TREEVVAVEQDRHLGYVLLSG-IPIRDYRADVRLTPTSSGGTEISWRSSFRAKVPGTTGL 121
Query 128 MRAALGGAV 136
+ LG +
Sbjct 122 IEKRLGAFI 130
>gi|269128419|ref|YP_003301789.1| cyclase/dehydrase [Thermomonospora curvata DSM 43183]
gi|268313377|gb|ACY99751.1| cyclase/dehydrase [Thermomonospora curvata DSM 43183]
Length=151
Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/147 (35%), Positives = 74/147 (51%), Gaps = 12/147 (8%)
Query 5 KFSFEVTKTSSAPAATLFRLVTDGGNWATWAKPIVAQSSWARRGDPAPG---GIGAIRKL 61
+++ ++T TSSAP LF V W W+ ARR P G G+GA+R++
Sbjct 2 QYTIDLTATSSAPPEVLFAHVAVAEAWPVWS----GLPGRARRIRPGVGTGDGVGAVRQM 57
Query 62 GMWPVFVQEETVEYEQDRRHVYKLVGARTPVQDYFGEVVLTPNASGGTDLRWSGSFTEKV 121
G +EE V YE R+ Y+++ A PV DY +V GGT +RW FT ++
Sbjct 58 GP----AREEAVLYEPPTRYAYRML-AGLPVDDYRADVTFRARPEGGTAVRWQACFTRRI 112
Query 122 RGTGPVMRAALGGAVRFFAGQLVKAAE 148
GTG +M+A L + A L + AE
Sbjct 113 PGTGALMKAVLTRLLSRAAEGLARHAE 139
>gi|296167249|ref|ZP_06849654.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295897425|gb|EFG77026.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=144
Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/147 (37%), Positives = 78/147 (54%), Gaps = 9/147 (6%)
Query 6 FSFEVTKTSSAPAATLFRLVTDGGNWA--TWAKPIVAQSSWARRGDPAPGGIGAIRKL-G 62
F +T+TS+AP T+F +TD A TWA + +S+ R G PAP G+GAIR+L
Sbjct 2 IEFTLTRTSTAPIETVFDAMTDHRGIADYTWA---IRRSTLDREGTPAPNGVGAIRRLAA 58
Query 63 MWPVFVQEETVEYEQDRRHVYKLVGARTPVQDYFGEVVLTPNASGGTDLRWSGSFTEKVR 122
+ P FV EE +EYE+ R+ YK++ P +++ G V L GGT++ W T K+
Sbjct 59 VGPPFV-EEIIEYERPTRYAYKMLSG-APTRNHVGTVQLR-ETDGGTEVSWQLRSTLKIP 115
Query 123 GTGPVMRAALGGAVRFFAGQLVKAAER 149
G +M + + AAER
Sbjct 116 GVDRLMLPVFKKIIDELLKGGIAAAER 142
>gi|342859685|ref|ZP_08716338.1| hypothetical protein MCOL_12418 [Mycobacterium colombiense CECT
3035]
gi|342132817|gb|EGT86037.1| hypothetical protein MCOL_12418 [Mycobacterium colombiense CECT
3035]
Length=144
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/149 (35%), Positives = 77/149 (52%), Gaps = 9/149 (6%)
Query 6 FSFEVTKTSSAPAATLFRLVTDGGNWA--TWAKPIVAQSSWARRGDPAPGGIGAIRKLGM 63
F +T+TS+AP T+F +TD A WA +S+ R G PAP G+GAIR+L +
Sbjct 2 IEFTLTRTSTAPIETVFDAMTDHRGIADYVWA---CRRSTLDREGTPAPNGVGAIRRLVV 58
Query 64 W-PVFVQEETVEYEQDRRHVYKLVGARTPVQDYFGEVVLTPNASGGTDLRWSGSFTEKVR 122
P FV EE +EYE+ R+ YK++ P +++ G + L A GT++ W T K+
Sbjct 59 IGPPFV-EEVIEYERPTRYAYKMLSG-APTRNHIGTIQLR-EADTGTEVSWHLRSTLKIA 115
Query 123 GTGPVMRAALGGAVRFFAGQLVKAAEREA 151
G +M + + AAER A
Sbjct 116 GVDRLMLPVFKKVIDELLKGGISAAERRA 144
>gi|340529783|gb|AEK44988.1| hypothetical protein RAM_32575 [Amycolatopsis mediterranei S699]
Length=134
Score = 68.2 bits (165), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/134 (36%), Positives = 65/134 (49%), Gaps = 4/134 (2%)
Query 14 SSAPAATLFRLVTDGGNWATWAKPIVAQSSWARRGDPAPGGIGAIRKLGMWPVFVQEETV 73
++APA ++ L+ DG +W W+ + R G+ P G+GA+R V E V
Sbjct 5 TTAPADAVYALLRDGKSWPAWSP--LGSFELVREGEDEPEGLGAVRLFKTNGVRSYERIV 62
Query 74 EYEQDRRHVYKLVGARTPVQDYFGEVVLTPNASGGTDLRWSGSFTEKVRGTGPVMRAALG 133
E RR Y L P++DY V L+P GGTD+ W +FT K+ GTG R LG
Sbjct 63 ALEPGRRFGYALEHG-LPLRDYVAYVDLSPR-DGGTDIHWHSTFTPKIPGTGWFYRWFLG 120
Query 134 GAVRFFAGQLVKAA 147
V+ A L A
Sbjct 121 SFVKRVAAGLAATA 134
>gi|300788198|ref|YP_003768489.1| hypothetical protein AMED_6353 [Amycolatopsis mediterranei U32]
gi|299797712|gb|ADJ48087.1| conserved hypothetical protein [Amycolatopsis mediterranei U32]
Length=140
Score = 68.2 bits (165), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/134 (36%), Positives = 65/134 (49%), Gaps = 4/134 (2%)
Query 14 SSAPAATLFRLVTDGGNWATWAKPIVAQSSWARRGDPAPGGIGAIRKLGMWPVFVQEETV 73
++APA ++ L+ DG +W W+ + R G+ P G+GA+R V E V
Sbjct 11 TTAPADAVYALLRDGKSWPAWSP--LGSFELVREGEDEPEGLGAVRLFKTNGVRSYERIV 68
Query 74 EYEQDRRHVYKLVGARTPVQDYFGEVVLTPNASGGTDLRWSGSFTEKVRGTGPVMRAALG 133
E RR Y L P++DY V L+P GGTD+ W +FT K+ GTG R LG
Sbjct 69 ALEPGRRFGYALEHG-LPLRDYVAYVDLSPR-DGGTDIHWHSTFTPKIPGTGWFYRWFLG 126
Query 134 GAVRFFAGQLVKAA 147
V+ A L A
Sbjct 127 SFVKRVAAGLAATA 140
>gi|330447796|ref|ZP_08311444.1| putative uncharacterized protein [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
gi|328491987|dbj|GAA05941.1| putative uncharacterized protein [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
Length=171
Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 76/148 (52%), Gaps = 6/148 (4%)
Query 1 MSGRKFSFEVTKTSSAPAATLFRLVTDGGNWATWAKPIVAQSSWARRGDPAPGGIGAIRK 60
M+ + EVT ++ P LF L++D A + AQ + R G P GIGAIR+
Sbjct 1 MTIHTVTLEVT--ANVPKKVLFALLSDH---AKLGRFFNAQYTLVRSGKPEENGIGAIRE 55
Query 61 LGMWPVFVQEETVEYEQDRRHVYKLVGARTPVQDYFGEVVLTPNASGGTDLRWSGSFTEK 120
+ P QE+ ++Y+++ Y+++ PV ++ G + T + + + + +F+ K
Sbjct 56 VIHGPFTYQEQVIDYKENEHIHYQIIHG-APVNEHGGWIKFTSINATQSQIHYHITFSPK 114
Query 121 VRGTGPVMRAALGGAVRFFAGQLVKAAE 148
++GTG +++ + ++ L++ +E
Sbjct 115 IKGTGWLLKYQIQHFLKQALNNLIQHSE 142
>gi|300785459|ref|YP_003765750.1| hypothetical protein AMED_3562 [Amycolatopsis mediterranei U32]
gi|299794973|gb|ADJ45348.1| conserved hypothetical protein [Amycolatopsis mediterranei U32]
gi|340526903|gb|AEK42108.1| hypothetical protein RAM_18110 [Amycolatopsis mediterranei S699]
Length=148
Score = 57.0 bits (136), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/118 (35%), Positives = 62/118 (53%), Gaps = 8/118 (6%)
Query 7 SFEVTKTSSAPAATLFRLVTDGGNWATWAKPIVAQSSWARRGDPAPGG---IGAIRKLGM 63
S++VT S+AP + ++ L+ D +W W+ PI A + AR +P G +GA+R
Sbjct 5 SYDVTAESAAPPSVVWALLLDPRSWPAWS-PIDALET-ARSAGLSPDGRDDVGAVRAFRT 62
Query 64 WPVFVQEETVEYEQDRRHVYKLVGARTP-VQDYFGEVVLTPNASGGTDLRWSGSFTEK 120
V +E E +RR Y+ GA P + DY V LT GGT +RW GS++ +
Sbjct 63 GKVVTKERITALEPERRFAYE--GAENPQLSDYRATVELTGLPGGGTRIRWHGSYSAR 118
>gi|90577231|ref|ZP_01233042.1| hypothetical protein VAS14_09309 [Vibrio angustum S14]
gi|90440317|gb|EAS65497.1| hypothetical protein VAS14_09309 [Vibrio angustum S14]
Length=171
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/148 (24%), Positives = 75/148 (51%), Gaps = 6/148 (4%)
Query 1 MSGRKFSFEVTKTSSAPAATLFRLVTDGGNWATWAKPIVAQSSWARRGDPAPGGIGAIRK 60
M+ + EVT ++ P LF L++D A + A+ S R G P GIGAIR+
Sbjct 1 MTIHTVTLEVT--ANVPKTVLFALLSDH---AKLGRFFNAKYSLIRSGKPEINGIGAIRE 55
Query 61 LGMWPVFVQEETVEYEQDRRHVYKLVGARTPVQDYFGEVVLTPNASGGTDLRWSGSFTEK 120
+ P QE+ ++++++ Y++V PV ++ G + + + + + +F+ K
Sbjct 56 VIQGPFTYQEQVIDFKENEHIHYQIVQG-APVNEHGGWIKFKSINATQSKIHYHITFSPK 114
Query 121 VRGTGPVMRAALGGAVRFFAGQLVKAAE 148
++GTG +++ + ++ +++ +E
Sbjct 115 IKGTGWLIKLQIQNFLKQALANVIQHSE 142
>gi|120555067|ref|YP_959418.1| hypothetical protein Maqu_2152 [Marinobacter aquaeolei VT8]
gi|120324916|gb|ABM19231.1| conserved hypothetical protein [Marinobacter aquaeolei VT8]
Length=142
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/133 (25%), Positives = 68/133 (52%), Gaps = 3/133 (2%)
Query 5 KFSFEVTKTSSAPAATLFRLVTDGGNWATWAKPIVAQSSWARRGDPAPGGIGAIRKLGMW 64
+++ E+ +T P F + D + V + + + DP GIG++RK+G+
Sbjct 3 QYTIEIDETFDVPRRKAFAVFADHHRFGKLVGAPVKRIKDSDQADP--NGIGSVRKIGIG 60
Query 65 PVFVQEETVEYEQDRRHVYKLVGARTPVQDYFGEVVLTPNASGGTDLRWSGSFTEKVRGT 124
P+ ++E + +E D Y + + +P++++ G ++ + G T +++S F + V T
Sbjct 61 PLSLEETVLGFEPDSLIEYT-ISSISPLRNHLGRILFSDAGEGRTRIQYSIRFEDIVPFT 119
Query 125 GPVMRAALGGAVR 137
G ++ ALG +R
Sbjct 120 GKAVQVALGKGLR 132
>gi|89072418|ref|ZP_01158997.1| hypothetical protein SKA34_06580 [Photobacterium sp. SKA34]
gi|89051950|gb|EAR57402.1| hypothetical protein SKA34_06580 [Photobacterium sp. SKA34]
Length=171
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/148 (23%), Positives = 75/148 (51%), Gaps = 6/148 (4%)
Query 1 MSGRKFSFEVTKTSSAPAATLFRLVTDGGNWATWAKPIVAQSSWARRGDPAPGGIGAIRK 60
M+ + EVT ++ P LF L++D A + A+ S R G P GIGAIR+
Sbjct 1 MTIHTVTLEVT--ANVPKTVLFALLSDH---AKLGRFFNAEYSLIRSGKPEVNGIGAIRE 55
Query 61 LGMWPVFVQEETVEYEQDRRHVYKLVGARTPVQDYFGEVVLTPNASGGTDLRWSGSFTEK 120
+ P QE+ ++++++ Y+++ PV ++ G + + + + + +F+ K
Sbjct 56 VIQGPFTYQEQIIDFKENEHIHYQIIQG-APVNEHGGWIKFKSINATQSKIHYHITFSPK 114
Query 121 VRGTGPVMRAALGGAVRFFAGQLVKAAE 148
++GTG +++ + ++ +++ +E
Sbjct 115 IKGTGWLIKFQIQNFLKQALANVIQHSE 142
>gi|311693795|gb|ADP96668.1| conserved hypothetical protein [Marinobacter adhaerens HP15]
Length=142
Score = 55.5 bits (132), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 65/132 (50%), Gaps = 3/132 (2%)
Query 6 FSFEVTKTSSAPAATLFRLVTDGGNWATWAKPIVAQSSWARRGDPAPGGIGAIRKLGMWP 65
++ E+ +T P +F L D + V + + + DP GIG++RK+G+ P
Sbjct 4 YTIEIDETFDVPRRRVFALFADHYRFGKLLGAPVKRIKDSDQADP--NGIGSVRKIGIGP 61
Query 66 VFVQEETVEYEQDRRHVYKLVGARTPVQDYFGEVVLTPNASGGTDLRWSGSFTEKVRGTG 125
V ++E +E D Y + + +P++++ G + G T + ++ +F + V TG
Sbjct 62 VGLEETVTSFEPDSLIEYTIT-SMSPIRNHLGRIRFEDTPEGHTRVNYTITFEDIVPFTG 120
Query 126 PVMRAALGGAVR 137
V+ +AL +R
Sbjct 121 KVVSSALEQGIR 132
>gi|337762645|emb|CCB71353.1| Activator of Hsp90 ATPase-like protein [Streptomyces cattleya
NRRL 8057]
Length=152
Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/145 (32%), Positives = 70/145 (49%), Gaps = 4/145 (2%)
Query 7 SFEVTKTSSAPAATLFRLVTDGGNWATWAKPIVAQSSWARRGDPAPGGIGAIRKLGMWPV 66
++ VT S+A T+F ++ G W +W+ PI A S P +G +R+
Sbjct 4 AYHVTARSAADPHTVFAILLRGATWPSWS-PIDAFSLDGPGPADGPQHVGDVREFRTGRN 62
Query 67 FVQEETVEYEQDRRHVYKLVGARTPVQDYFGEVVLTPNASG-GTDLRWSGSFTEKVRGTG 125
+E + E R Y +VG+ P++DY V L P ASG GT++ WS +F ++ GTG
Sbjct 63 VSRERVDKLEPPSRFEYSIVGS-GPLKDYRAVVELRPAASGQGTEIHWSATFRPQLAGTG 121
Query 126 PVMRAALGGAV-RFFAGQLVKAAER 149
R+ L + R G AAE
Sbjct 122 WFWRSYLSRYMQRMVEGLAAYAAEH 146
>gi|255320508|ref|ZP_05361689.1| conserved hypothetical protein [Acinetobacter radioresistens
SK82]
gi|262378400|ref|ZP_06071557.1| conserved hypothetical protein [Acinetobacter radioresistens
SH164]
gi|255302480|gb|EET81716.1| conserved hypothetical protein [Acinetobacter radioresistens
SK82]
gi|262299685|gb|EEY87597.1| conserved hypothetical protein [Acinetobacter radioresistens
SH164]
Length=144
Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/142 (27%), Positives = 66/142 (47%), Gaps = 4/142 (2%)
Query 8 FEVTKTSSAPAATLFRLVTDGGNWATWAKPIVAQSSWARRGDPAPGGIGAIRKLGMWPVF 67
EV K +AP + +F L++ + T PI S P G+G++R++G PV
Sbjct 4 IEVKKQFNAPVSQVFELLSKHSTYNTAFAPIQVVRSKDSADPQRPDGVGSVRRMGYGPVK 63
Query 68 -VQEETVEYEQDRRHVYKLVGARTP-VQDYFGEVVLTPNASGGTDLRWSGSFTEKVRGTG 125
+QEE E+++R YK++ + P ++ + G + A T +R+ K
Sbjct 64 PLQEEITLLEENKRIEYKII--KNPLIRHHLGRIEFEELAGDKTLVRYRIELQAKAPFVS 121
Query 126 PVMRAALGGAVRFFAGQLVKAA 147
++ A L GA+ +L K+
Sbjct 122 KLILAQLKGAITLGLSKLAKSV 143
>gi|149374548|ref|ZP_01892322.1| hypothetical protein MDG893_10886 [Marinobacter algicola DG893]
gi|149361251|gb|EDM49701.1| hypothetical protein MDG893_10886 [Marinobacter algicola DG893]
Length=142
Score = 53.9 bits (128), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/134 (26%), Positives = 68/134 (51%), Gaps = 5/134 (3%)
Query 5 KFSFEVTKTSSAPAATLFRLVTDGGNWATWAKPIVAQSSWARRGDPA-PGGIGAIRKLGM 63
+ E+ +T P +F + D + K + A R D A P G+G+IRK+G+
Sbjct 3 NYKIEIDETFDVPRNRVFAVFAD---HERFGKLLGAPVKRIRDSDQADPNGLGSIRKIGI 59
Query 64 WPVFVQEETVEYEQDRRHVYKLVGARTPVQDYFGEVVLTPNASGGTDLRWSGSFTEKVRG 123
P+ ++E + +E Y + + +P++++ G + A+G T ++++ SF + V
Sbjct 60 GPIGLEETVITFEPGVLIEYT-ISSMSPIRNHLGRIRFDDAANGRTRVQYTISFDDIVPF 118
Query 124 TGPVMRAALGGAVR 137
TG ++ +AL +R
Sbjct 119 TGKLVSSALDQGIR 132
>gi|54302211|ref|YP_132204.1| hypothetical protein PBPRB0531 [Photobacterium profundum SS9]
gi|46915632|emb|CAG22404.1| hypothetical protein PBPRB0531 [Photobacterium profundum SS9]
Length=147
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/141 (23%), Positives = 68/141 (49%), Gaps = 4/141 (2%)
Query 10 VTKTSSAPAATLFRLVTDGGNWATWAKPIVAQSSWARRGDPAPGGIGAIRKLGMWPVFVQ 69
+ +T++ P LF L++D + A S R+G P GIGA+R++ P Q
Sbjct 8 LEQTANVPKKILFHLLSDHEKLGRF---FYADFSLVRQGKPDTNGIGAVREVTTGPFRFQ 64
Query 70 EETVEYEQDRRHVYKLVGARTPVQDYFGEVVLTPNASGGTDLRWSGSFTEKVRGTGPVMR 129
E+ ++Y+++ YK++ P++++ + + + + + F+ K+ GTG +++
Sbjct 65 EQIIDYKENEHLHYKIING-GPMKEHGSWIRFQSINATQSLIHYRIKFSPKISGTGWLIK 123
Query 130 AALGGAVRFFAGQLVKAAERE 150
+ VR + + E E
Sbjct 124 YLIEKDVRKALSTIAQLGESE 144
>gi|90411147|ref|ZP_01219160.1| hypothetical protein P3TCK_06262 [Photobacterium profundum 3TCK]
gi|90327993|gb|EAS44314.1| hypothetical protein P3TCK_06262 [Photobacterium profundum 3TCK]
Length=147
Score = 51.6 bits (122), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/141 (22%), Positives = 68/141 (49%), Gaps = 4/141 (2%)
Query 10 VTKTSSAPAATLFRLVTDGGNWATWAKPIVAQSSWARRGDPAPGGIGAIRKLGMWPVFVQ 69
+ +T++ P LF L++D + A S R+G P GIGA+R++ P Q
Sbjct 8 LEQTANVPKKILFHLLSDHEKLGRF---FYADFSLVRQGKPDTNGIGAVREVTTGPFRFQ 64
Query 70 EETVEYEQDRRHVYKLVGARTPVQDYFGEVVLTPNASGGTDLRWSGSFTEKVRGTGPVMR 129
E+ ++Y+++ K++ P++++ + + + + + F+ K+ GTG +++
Sbjct 65 EQIIDYKENEHLHCKIING-GPIKEHGSWIRFQSINATQSLIHYRIKFSPKISGTGWLIK 123
Query 130 AALGGAVRFFAGQLVKAAERE 150
+ VR + + +E E
Sbjct 124 YLIEKDVRKALSTIAQQSESE 144
>gi|158314759|ref|YP_001507267.1| AMP-dependent synthetase and ligase [Frankia sp. EAN1pec]
gi|158110164|gb|ABW12361.1| AMP-dependent synthetase and ligase [Frankia sp. EAN1pec]
Length=773
Score = 51.2 bits (121), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/99 (34%), Positives = 53/99 (54%), Gaps = 6/99 (6%)
Query 53 GGIGAIRKLGMWPVFVQEETVEYEQDRRHVYKLVGARTPVQDYFGEVVLTPNASGGTDLR 112
GGIGA+R + M + ++E+ + E RR Y+ + P++DY GE+ L P+ + GT L
Sbjct 44 GGIGAVRIVRMTGLSIREQVTDIEPARRLAYRCISGH-PLRDYRGEIFLAPSGT-GTSLT 101
Query 113 WSGSFTEKVRGTGPVMRAALGGAVRFFAGQLVKAAEREA 151
W + + R ++ L R FA L +AAER +
Sbjct 102 WVLDTSTRFR----LVAWLLVNQARLFAWSLARAAERSS 136
>gi|291299607|ref|YP_003510885.1| activator of Hsp90 ATPase 1 family protein [Stackebrandtia nassauensis
DSM 44728]
gi|290568827|gb|ADD41792.1| Activator of Hsp90 ATPase 1 family protein [Stackebrandtia nassauensis
DSM 44728]
Length=153
Score = 50.8 bits (120), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/147 (27%), Positives = 63/147 (43%), Gaps = 9/147 (6%)
Query 7 SFEVTKTSSAPAATLFRLVTDGGNWATWA--KPIVAQSSWARRGDPAPGGIGAIRKLGMW 64
+++VT T++AP A ++RL+ D W W +V S D +G++R +
Sbjct 5 NYDVTATTTAPPAVVWRLLLDARTWPQWTPIDELVVDRSTGLGPDNGSTQVGSVRAFRVG 64
Query 65 PVFVQEETVEYEQDRRHVYKLVGARTPVQDYFGEVVLTPNASGGTDLRWSGSFTEKVRGT 124
E E +RR Y+ + DY + LTP +G T +RW G++T
Sbjct 65 EGVTGERVTELVDERRFSYEDAFIDV-MSDYQASIELTPTPTGTT-IRWHGTYTP----- 117
Query 125 GPVMRAALGGAVRFFAGQLVKAAEREA 151
P M + L +R F Q+ A
Sbjct 118 APGMESVLPDYLRDFMQQMADGLATHA 144
>gi|108802095|ref|YP_642292.1| hypothetical protein Mmcs_5132 [Mycobacterium sp. MCS]
gi|119871248|ref|YP_941200.1| hypothetical protein Mkms_5221 [Mycobacterium sp. KMS]
gi|126438076|ref|YP_001073767.1| hypothetical protein Mjls_5513 [Mycobacterium sp. JLS]
gi|108772514|gb|ABG11236.1| conserved hypothetical protein [Mycobacterium sp. MCS]
gi|119697337|gb|ABL94410.1| conserved hypothetical protein [Mycobacterium sp. KMS]
gi|126237876|gb|ABO01277.1| conserved hypothetical protein [Mycobacterium sp. JLS]
Length=144
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/127 (28%), Positives = 61/127 (49%), Gaps = 11/127 (8%)
Query 7 SFEVTKTSSAPAATLFRLVTDGGNWATWAKPIVAQSSWARRGDPAPGGIGAIRKL---GM 63
+ V +T AP +F + D + A P+V +++W R P PG +GA+R++ GM
Sbjct 3 TIHVERTIGAPPERVFSWLADPASLT--AAPLVLRAAWTRE-SPGPG-VGALRQVIAAGM 58
Query 64 WPVFVQEETVEYEQDRRHVYKLVGARTPVQDYFGEVVLTPNASGGTDLRWSGSFTEKVRG 123
W +EE Y+ + Y++V + G + TP+ GT + W+ +++ G
Sbjct 59 W---FREEITAYDPPHSYSYRIVRSVPAFDHEGGTITFTPSGD-GTHVSWTSTYSHPAYG 114
Query 124 TGPVMRA 130
G M A
Sbjct 115 GGKAMEA 121
>gi|332142238|ref|YP_004427976.1| hypothetical protein MADE_1014220 [Alteromonas macleodii str.
'Deep ecotype']
gi|327552260|gb|AEA98978.1| hypothetical protein MADE_1014220 [Alteromonas macleodii str.
'Deep ecotype']
Length=146
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/109 (28%), Positives = 54/109 (50%), Gaps = 4/109 (3%)
Query 6 FSFEVTKTSSAPAATLFRLVTDGGNWATWAKPIVAQSSWARRGDPAPGGIGAIRKLGMWP 65
FS V +T + P +F +++D N+A + + +S+ +G G+GA+R++
Sbjct 2 FSIHVERTINKPIEKVFAILSDHANYAQFKA--IERSNLLIKGKHETNGLGAVREIISGG 59
Query 66 VFVQEETVEYEQDRRHVYKLVGAR-TPVQDYFGEVVLTPNASGGTDLRW 113
+ EE V YE + YK+V ++ P GE+ L + G T + W
Sbjct 60 SNLHEEIVAYEPPYKLGYKVVKSKPLPYNHQLGEITLK-DKDGKTHVTW 107
>gi|342862206|ref|ZP_08718848.1| hypothetical protein MCOL_25071 [Mycobacterium colombiense CECT
3035]
gi|342130284|gb|EGT83604.1| hypothetical protein MCOL_25071 [Mycobacterium colombiense CECT
3035]
Length=169
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/128 (28%), Positives = 56/128 (44%), Gaps = 3/128 (2%)
Query 6 FSFEVTKTSSAPAATLFRLVTDGGNWATWAKPIVAQSSWARRGDPAPGGIGAIRKLGMWP 65
++ VTK +AP +F TD + V R GD G+GA+R+L P
Sbjct 2 YTLHVTKMIAAPIDEVFDAYTDHERLSEVFG--VRSCRVTRPGDTERNGLGAVRELDCGP 59
Query 66 VFVQEETVEYEQDRRHVYKLVGARTPVQDYFGEVVLTPNASGGTDLRWSGSFTEKVRGTG 125
+ + EE +E+ R Y++ +R +G+V A GT + W+ F + G
Sbjct 60 IRLCEEITGFERPHRMQYRIRDSRPRADHRYGQVDFIETAQ-GTQVTWTTIFGIQAPLIG 118
Query 126 PVMRAALG 133
V+ A G
Sbjct 119 KVLDPAFG 126
>gi|311743113|ref|ZP_07716921.1| conserved hypothetical protein [Aeromicrobium marinum DSM 15272]
gi|311313793|gb|EFQ83702.1| conserved hypothetical protein [Aeromicrobium marinum DSM 15272]
Length=141
Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/128 (28%), Positives = 63/128 (50%), Gaps = 3/128 (2%)
Query 9 EVTKTSSAPAATLFRLVTDGGNWATWAKPIVAQSSWARRGDPAPGGIGAIRKLGMWPVFV 68
VT ++ AT+F +++ N A+ A+ + R G + G G++R+L + P+
Sbjct 8 HVTHQFTSDPATVFAALSEHENLASI---FPARITRVRNGHDSRNGAGSVRRLKIGPLPA 64
Query 69 QEETVEYEQDRRHVYKLVGARTPVQDYFGEVVLTPNASGGTDLRWSGSFTEKVRGTGPVM 128
EETV ++ + + +P++ + G LTP A GGT L ++ F V G V+
Sbjct 65 FEETVMTAEEPALIEYRITKGSPLKSHRGVQRLTPTADGGTQLDYTIEFAAPVPGLAKVV 124
Query 129 RAALGGAV 136
AL ++
Sbjct 125 ALALTQSI 132
>gi|169629377|ref|YP_001703026.1| hypothetical protein MAB_2291 [Mycobacterium abscessus ATCC 19977]
gi|169241344|emb|CAM62372.1| Conserved hypothetical protein [Mycobacterium abscessus]
Length=164
Score = 47.4 bits (111), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/110 (34%), Positives = 54/110 (50%), Gaps = 3/110 (2%)
Query 7 SFEVTKTSSAPAATLFRLVTDGGNWATWAKPIVAQSSWARRGDPAPGGIGAIRKLGMWPV 66
+ EV ++ +AP A +F +++ N+ P+ + R G A G GAIR+
Sbjct 3 TIEVRRSIAAPIADVFDWISNAENYTD--SPLFLAAKLIRSGSAAAYGAGAIRRFTFPFA 60
Query 67 FVQEETVEYEQDRRHVYKLVGARTPVQDYFGEVVLTPNASGGTDLRWSGS 116
V EE ++ Y++V PV+ G VVLTP A GTDL WS S
Sbjct 61 VVHEEITRFDPPYSFSYRVVKCMPPVRHEGGAVVLTPTAQ-GTDLMWSSS 109
>gi|342860650|ref|ZP_08717300.1| cyclase/dehydrase [Mycobacterium colombiense CECT 3035]
gi|342131674|gb|EGT84931.1| cyclase/dehydrase [Mycobacterium colombiense CECT 3035]
Length=145
Score = 47.0 bits (110), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 33/145 (23%), Positives = 64/145 (45%), Gaps = 4/145 (2%)
Query 5 KFSFEVTKTSSAPAATLFRLVTDGGNWATWAKPIVAQSSWARRGDPAPGGIGAIRKLGMW 64
++S + +AP ++ L+ D W W P ++W G GAIR++ +
Sbjct 2 RYSIRFERACAAPPEVVYGLLIDVERWPDWL-PGARSANWEETGSLG-AHEGAIRRIVVS 59
Query 65 PVFVQEETVEYEQDRRHVYKLVGARTPVQDYFGEVVLTPNASGGTDLRWSGSFTEKVRGT 124
+ ++EE + + H Y++V PV D+ +V + G + W +F ++
Sbjct 60 GLTMREEVLVDDGPHHHAYRIVSG-VPVTDHRADVHIEEQVRGSL-IVWRATFRSRIPCA 117
Query 125 GPVMRAALGGAVRFFAGQLVKAAER 149
GP++ L ++ A L + AE
Sbjct 118 GPLIWLMLRASMPRMATALARGAEH 142
>gi|110832939|ref|YP_691798.1| hypothetical protein ABO_0078 [Alcanivorax borkumensis SK2]
gi|110646050|emb|CAL15526.1| conserved hypothetical protein [Alcanivorax borkumensis SK2]
Length=148
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/129 (25%), Positives = 59/129 (46%), Gaps = 2/129 (1%)
Query 8 FEVTKTSSAPAATLFRLVTDGGNWATWAKPIVAQSSWARRGDPAPGGIGAIRKLGMWPVF 67
E+ KT LF ++ N P A+ + G +P G+G+ RK+ +
Sbjct 13 IEIHKTFPFSVDKLFNFLSVHENLELIFAP--AKIKRIKDGQDSPNGVGSTRKMQILIAP 70
Query 68 VQEETVEYEQDRRHVYKLVGARTPVQDYFGEVVLTPNASGGTDLRWSGSFTEKVRGTGPV 127
EETV + + +P++ + G + + A+GG+ L ++ F K+ GP+
Sbjct 71 PFEETVTKIVPNERIEYAITKGSPLKHHKGVMRFSEAANGGSKLDYTIEFEGKLPLIGPI 130
Query 128 MRAALGGAV 136
++A LG A+
Sbjct 131 IKAGLGQAI 139
>gi|329938137|ref|ZP_08287588.1| hypothetical protein SGM_3080 [Streptomyces griseoaurantiacus
M045]
gi|329302626|gb|EGG46516.1| hypothetical protein SGM_3080 [Streptomyces griseoaurantiacus
M045]
Length=91
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/84 (36%), Positives = 43/84 (52%), Gaps = 2/84 (2%)
Query 69 QEETVEYEQDRRHVYKLVGARTPVQDYFGEVVLTPNASGGTDLRWSGSFTEKVRGTGPVM 128
+E VE DRR Y+ +G P + Y G + L GGTD+ WS +F KV TG ++
Sbjct 10 REPIVELVADRRFGYENLGG--PFRSYRGVIELVEAPGGGTDITWSATFVPKVPLTGRLL 67
Query 129 RAALGGAVRFFAGQLVKAAEREAV 152
R L G ++ A L + A R +
Sbjct 68 RRYLTGYMQRMADGLARYAGRSDI 91
>gi|254429840|ref|ZP_05043547.1| hypothetical protein ADG881_3070 [Alcanivorax sp. DG881]
gi|196196009|gb|EDX90968.1| hypothetical protein ADG881_3070 [Alcanivorax sp. DG881]
Length=139
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/129 (25%), Positives = 60/129 (47%), Gaps = 2/129 (1%)
Query 8 FEVTKTSSAPAATLFRLVTDGGNWATWAKPIVAQSSWARRGDPAPGGIGAIRKLGMWPVF 67
+++KT LF ++ N P A+ + G +P G+G+ RK+ +
Sbjct 4 IDISKTFPFSVDKLFDFLSVHENLELIFAP--AKIKRIKDGQDSPNGVGSTRKMQILVAP 61
Query 68 VQEETVEYEQDRRHVYKLVGARTPVQDYFGEVVLTPNASGGTDLRWSGSFTEKVRGTGPV 127
EETV + + +P++ + G + + A+GG+ L ++ F K+ GP+
Sbjct 62 PFEETVTKVVPNERIEYTITKGSPLKHHKGIMRFSEAANGGSQLDYTIEFEGKLPLIGPI 121
Query 128 MRAALGGAV 136
++A LG A+
Sbjct 122 IKAGLGQAI 130
>gi|126641319|ref|YP_001084303.1| hypothetical protein A1S_1273 [Acinetobacter baumannii ATCC 17978]
gi|169796469|ref|YP_001714262.1| hypothetical protein ABAYE2432 [Acinetobacter baumannii AYE]
gi|213156418|ref|YP_002318838.1| hypothetical protein AB57_1462 [Acinetobacter baumannii AB0057]
12 more sequence titles
Length=143
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/131 (25%), Positives = 62/131 (48%), Gaps = 5/131 (3%)
Query 8 FEVTKTSSAPAATLFRLVTDGGNWATWAKPIVAQSSWARRGDPAPGGIGAIRKLGM--WP 65
+ + AP +F +++ N + P A+ + G A G+G+ RK+ + P
Sbjct 7 INIVQEFDAPVDKVFAALSEHENLSKLFAP--AKVTRISNGKDARNGVGSARKMSIPFTP 64
Query 66 VFVQEETVEYEQDRRHVYKLVGARTPVQDYFGEVVLTPNASGGTDLRWSGSFTEKVRGTG 125
FV+ V Y+++ Y + +P++ + G + T + T L ++ SF +V G
Sbjct 65 SFVETNLV-YKENELIEYAITSGISPIKAHRGVMQFTDLGNNRTRLNYTISFKGRVPFIG 123
Query 126 PVMRAALGGAV 136
P+++AAL V
Sbjct 124 PIIKAALQNGV 134
>gi|325121670|gb|ADY81193.1| hypothetical protein BDGL_000607 [Acinetobacter calcoaceticus
PHEA-2]
Length=143
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/131 (25%), Positives = 62/131 (48%), Gaps = 5/131 (3%)
Query 8 FEVTKTSSAPAATLFRLVTDGGNWATWAKPIVAQSSWARRGDPAPGGIGAIRKLG--MWP 65
+ + AP +F +++ N + P A+ + G A G+G+ RK+ + P
Sbjct 7 INIVQEFDAPVDKVFATLSEHENLSKLFAP--AKVTRISNGKDARNGVGSARKMSIPLTP 64
Query 66 VFVQEETVEYEQDRRHVYKLVGARTPVQDYFGEVVLTPNASGGTDLRWSGSFTEKVRGTG 125
FV+ V Y+++ Y + +P++ + G + T + T L ++ SF +V G
Sbjct 65 SFVETNLV-YKENELIEYAITSGISPIKGHRGVMKFTDLGNNRTRLDYTISFKGRVPFIG 123
Query 126 PVMRAALGGAV 136
P+++AAL V
Sbjct 124 PIIKAALQNGV 134
>gi|260555537|ref|ZP_05827758.1| conserved hypothetical protein [Acinetobacter baumannii ATCC
19606]
gi|260412079|gb|EEX05376.1| conserved hypothetical protein [Acinetobacter baumannii ATCC
19606]
Length=143
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/131 (25%), Positives = 62/131 (48%), Gaps = 5/131 (3%)
Query 8 FEVTKTSSAPAATLFRLVTDGGNWATWAKPIVAQSSWARRGDPAPGGIGAIRKLGM--WP 65
+ + AP +F +++ N + P A+ + G A G+G+ RK+ + P
Sbjct 7 INIIQEFDAPVDKVFAALSEHENLSKLFAP--AKVTRISNGKDARNGVGSARKMSIPFTP 64
Query 66 VFVQEETVEYEQDRRHVYKLVGARTPVQDYFGEVVLTPNASGGTDLRWSGSFTEKVRGTG 125
FV+ V Y+++ Y + +P++ + G + T + T L ++ SF +V G
Sbjct 65 SFVETNLV-YKENELIEYAITSGISPIKAHRGVMQFTDLGNNRTRLNYTISFKGRVPFIG 123
Query 126 PVMRAALGGAV 136
P+++AAL V
Sbjct 124 PIIKAALQNGV 134
>gi|226952954|ref|ZP_03823418.1| conserved hypothetical protein [Acinetobacter sp. ATCC 27244]
gi|294650536|ref|ZP_06727893.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC
19194]
gi|226836275|gb|EEH68658.1| conserved hypothetical protein [Acinetobacter sp. ATCC 27244]
gi|292823533|gb|EFF82379.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC
19194]
Length=146
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/143 (25%), Positives = 66/143 (47%), Gaps = 10/143 (6%)
Query 10 VTKTSSAPAATLFRLVTDGGNWATWAKPI----VAQSSWARRGDPAPGGIGAIRKLGMWP 65
+ K +AP + +F L++ + P+ V S+ +R P G+G+IR++G P
Sbjct 7 IKKEFNAPISEVFDLLSKHATYNKAFAPLQVVRVKDSTDPQR----PDGVGSIRRMGFGP 62
Query 66 VF-VQEETVEYEQDRRHVYKLVGARTPVQDYFGEVVLTPNASGGTDLRWSGSFTEKVRGT 124
+ +QEE E+++R YKL+ V+ + G++ T + + FT K
Sbjct 63 IKPLQEEITLLEENKRIEYKLINNPL-VKHHLGQIDFREITPYITLVTYKIEFTAKAPLV 121
Query 125 GPVMRAALGGAVRFFAGQLVKAA 147
++ A L A+ +L K+
Sbjct 122 SKLILAQLKAAITLGFSKLAKSV 144
>gi|184157599|ref|YP_001845938.1| hypothetical protein ACICU_01279 [Acinetobacter baumannii ACICU]
gi|332874561|ref|ZP_08442462.1| hypothetical protein HMPREF0022_02081 [Acinetobacter baumannii
6014059]
gi|183209193|gb|ACC56591.1| hypothetical protein ACICU_01279 [Acinetobacter baumannii ACICU]
8 more sequence titles
Length=143
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/131 (25%), Positives = 62/131 (48%), Gaps = 5/131 (3%)
Query 8 FEVTKTSSAPAATLFRLVTDGGNWATWAKPIVAQSSWARRGDPAPGGIGAIRKLGM--WP 65
+ + AP +F +++ N + P A+ + G A G+G+ RK+ + P
Sbjct 7 INIIQEFDAPIDKVFAALSEHENLSKLFAP--AKVTRISNGKDARNGVGSARKMSIPFTP 64
Query 66 VFVQEETVEYEQDRRHVYKLVGARTPVQDYFGEVVLTPNASGGTDLRWSGSFTEKVRGTG 125
FV+ V Y+++ Y + +P++ + G + T + T L ++ SF +V G
Sbjct 65 SFVETNLV-YKENELIEYAITSGISPIKAHRGVMQFTDLGNNRTRLNYTISFKGRVPFIG 123
Query 126 PVMRAALGGAV 136
P+++AAL V
Sbjct 124 PIIKAALQNGV 134
>gi|299770720|ref|YP_003732746.1| hypothetical protein AOLE_12430 [Acinetobacter sp. DR1]
gi|298700808|gb|ADI91373.1| hypothetical protein AOLE_12430 [Acinetobacter sp. DR1]
Length=143
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/131 (24%), Positives = 62/131 (48%), Gaps = 5/131 (3%)
Query 8 FEVTKTSSAPAATLFRLVTDGGNWATWAKPIVAQSSWARRGDPAPGGIGAIRKLG--MWP 65
+ + AP +F +++ N + P A+ + G A G+G+ RK+ + P
Sbjct 7 INIVQEFDAPVDKVFATLSEHENLSKLFAP--AKVTRISNGKDARNGVGSARKMSIPLTP 64
Query 66 VFVQEETVEYEQDRRHVYKLVGARTPVQDYFGEVVLTPNASGGTDLRWSGSFTEKVRGTG 125
F++ V Y+++ Y + +P++ + G + T + T L ++ SF +V G
Sbjct 65 SFIETNLV-YKENELIEYAITSGISPIKGHRGVMKFTDLGNNRTRLDYTISFKGRVPFIG 123
Query 126 PVMRAALGGAV 136
P+++AAL V
Sbjct 124 PIIKAALQNGV 134
>gi|293608530|ref|ZP_06690833.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292829103|gb|EFF87465.1| conserved hypothetical protein [Acinetobacter sp. SH024]
Length=157
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/131 (25%), Positives = 62/131 (48%), Gaps = 5/131 (3%)
Query 8 FEVTKTSSAPAATLFRLVTDGGNWATWAKPIVAQSSWARRGDPAPGGIGAIRKLG--MWP 65
+ + AP +F +++ N + P A+ + G A G+G+ RK+ + P
Sbjct 21 INIVQEFDAPVDKVFATLSEHENLSKLFAP--AKVTRISNGKDARNGVGSARKMSIPLTP 78
Query 66 VFVQEETVEYEQDRRHVYKLVGARTPVQDYFGEVVLTPNASGGTDLRWSGSFTEKVRGTG 125
FV+ V Y+++ Y + +P++ + G + T + T L ++ SF +V G
Sbjct 79 SFVETNLV-YKENELIEYAITSGISPIKGHRGVMKFTDLGNNRTRLDYTISFKGRVPFIG 137
Query 126 PVMRAALGGAV 136
P+++AAL V
Sbjct 138 PIIKAALQNGV 148
Lambda K H
0.319 0.134 0.413
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 131222683000
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40