BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv1933c Length=363 Score E Sequences producing significant alignments: (Bits) Value gi|15609070|ref|NP_216449.1| acyl-CoA dehydrogenase FADE18 [Myco... 719 0.0 gi|148823145|ref|YP_001287899.1| acyl-CoA dehydrogenase fadE18 [... 718 0.0 gi|340626943|ref|YP_004745395.1| putative acyl-CoA dehydrogenase... 711 0.0 gi|289443413|ref|ZP_06433157.1| acyl-CoA dehydrogenase fadE18 [M... 668 0.0 gi|183982865|ref|YP_001851156.1| acyl-CoA dehydrogenase FadE18 [... 540 1e-151 gi|118618310|ref|YP_906642.1| acyl-CoA dehydrogenase FadE18 [Myc... 539 2e-151 gi|289758042|ref|ZP_06517420.1| FadE18 protein [Mycobacterium tu... 513 2e-143 gi|120404961|ref|YP_954790.1| acyl-CoA dehydrogenase domain-cont... 502 5e-140 gi|312196696|ref|YP_004016757.1| acyl-CoA dehydrogenase domain-c... 256 5e-66 gi|296169402|ref|ZP_06851025.1| acyl-CoA dehydrogenase [Mycobact... 250 2e-64 gi|254774665|ref|ZP_05216181.1| acyl-CoA dehydrogenase domain-co... 247 2e-63 gi|300785722|ref|YP_003766013.1| acyl-CoA dehydrogenase [Amycola... 244 2e-62 gi|297204608|ref|ZP_06922005.1| pimeloyl-CoA dehydrogenase, smal... 242 8e-62 gi|300788994|ref|YP_003769285.1| acyl-CoA dehydrogenase [Amycola... 241 2e-61 gi|297204614|ref|ZP_06922011.1| pimeloyl-CoA dehydrogenase, smal... 236 5e-60 gi|312198857|ref|YP_004018918.1| acyl-CoA dehydrogenase domain-c... 236 6e-60 gi|158317323|ref|YP_001509831.1| acyl-CoA dehydrogenase domain-c... 235 7e-60 gi|269126119|ref|YP_003299489.1| acyl-CoA dehydrogenase domain-c... 235 1e-59 gi|111222877|ref|YP_713671.1| putative acyl-CoA dehydrogenase [F... 232 6e-59 gi|111223285|ref|YP_714079.1| putative acyl-CoA dehydrogenase [F... 231 2e-58 gi|288918615|ref|ZP_06412964.1| acyl-CoA dehydrogenase domain pr... 230 3e-58 gi|300785754|ref|YP_003766045.1| acyl-CoA dehydrogenase [Amycola... 225 7e-57 gi|119504197|ref|ZP_01626278.1| putative acyl-CoA dehydrogenase ... 219 4e-55 gi|77361054|ref|YP_340629.1| acyl-CoA dehydrogenase [Pseudoalter... 218 9e-55 gi|342857570|ref|ZP_08714226.1| acyl-CoA dehydrogenase domain-co... 218 1e-54 gi|146275986|ref|YP_001166146.1| acyl-CoA dehydrogenase domain-c... 215 1e-53 gi|40062860|gb|AAR37731.1| acyl-CoA dehydrogenase, putative [unc... 214 1e-53 gi|304312376|ref|YP_003811974.1| Predicted acyl-CoA dehydrogenas... 210 3e-52 gi|262200923|ref|YP_003272131.1| acyl-CoA dehydrogenase domain-c... 206 4e-51 gi|329897226|ref|ZP_08271965.1| Acyl-CoA dehydrogenase, short-ch... 206 4e-51 gi|145220949|ref|YP_001131627.1| acyl-CoA dehydrogenase domain-c... 206 6e-51 gi|86748810|ref|YP_485306.1| Acyl-CoA dehydrogenase-like [Rhodop... 204 2e-50 gi|167624070|ref|YP_001674364.1| acyl-CoA dehydrogenase domain-c... 204 3e-50 gi|118470069|ref|YP_890797.1| acyl-CoA dehydrogenase [Mycobacter... 203 3e-50 gi|288916035|ref|ZP_06410417.1| acyl-CoA dehydrogenase domain pr... 202 6e-50 gi|345011678|ref|YP_004814032.1| acyl-CoA dehydrogenase domain-c... 201 1e-49 gi|120401418|ref|YP_951247.1| acyl-CoA dehydrogenase domain-cont... 201 2e-49 gi|254483137|ref|ZP_05096371.1| Acyl-CoA dehydrogenase, C-termin... 196 4e-48 gi|119504461|ref|ZP_01626540.1| acyl-CoA dehydrogenase-like prot... 196 4e-48 gi|108802152|ref|YP_642349.1| acyl-CoA dehydrogenase-like protei... 195 8e-48 gi|324999964|ref|ZP_08121076.1| acyl-CoA dehydrogenase [Pseudono... 195 9e-48 gi|334144984|ref|YP_004538193.1| acyl-CoA dehydrogenase domain-c... 195 9e-48 gi|312138164|ref|YP_004005500.1| acyl-CoA dehydrogenase [Rhodoco... 195 1e-47 gi|72162709|ref|YP_290366.1| acyl-CoA dehydrogenase [Thermobifid... 195 1e-47 gi|146338041|ref|YP_001203089.1| putative acyl-CoA dehydrogenase... 195 1e-47 gi|325674932|ref|ZP_08154619.1| acyl-CoA dehydrogenase [Rhodococ... 194 1e-47 gi|134101885|ref|YP_001107546.1| putative acyl-CoA dehydrogenase... 194 2e-47 gi|148258321|ref|YP_001242906.1| putative acyl-CoA dehydrogenase... 194 2e-47 gi|316935132|ref|YP_004110114.1| acyl-CoA dehydrogenase domain-c... 194 2e-47 gi|90423700|ref|YP_532070.1| acyl-CoA dehydrogenase-like protein... 193 3e-47 >gi|15609070|ref|NP_216449.1| acyl-CoA dehydrogenase FADE18 [Mycobacterium tuberculosis H37Rv] gi|15841404|ref|NP_336441.1| acyl-CoA dehydrogenase, putative [Mycobacterium tuberculosis CDC1551] gi|31793125|ref|NP_855618.1| acyl-CoA dehydrogenase FADE18 [Mycobacterium bovis AF2122/97] 69 more sequence titles Length=363 Score = 719 bits (1857), Expect = 0.0, Method: Compositional matrix adjust. Identities = 362/363 (99%), Positives = 363/363 (100%), Gaps = 0/363 (0%) Query 1 VDFRYSTEQDDFRASLRGFLGRGAPVREMAAADGSDRRLWQRLCTELELPALHVPPEHGG 60 +DFRYSTEQDDFRASLRGFLGRGAPVREMAAADGSDRRLWQRLCTELELPALHVPPEHGG Sbjct 1 MDFRYSTEQDDFRASLRGFLGRGAPVREMAAADGSDRRLWQRLCTELELPALHVPPEHGG 60 Query 61 LGATLVETAIAFAELGRALTPIPFAATVFAIEAILRMGDDEQRKRLLAGLLTGARIGTIA 120 LGATLVETAIAFAELGRALTPIPFAATVFAIEAILRMGDDEQRKRLLAGLLTGARIGTIA Sbjct 61 LGATLVETAIAFAELGRALTPIPFAATVFAIEAILRMGDDEQRKRLLAGLLTGARIGTIA 120 Query 121 VSGHDVASATTVRAVRRDGRPALTGECTPVLHGHVADLFVVPAVADGSIVLHVVAADAPG 180 VSGHDVASATTVRAVRRDGRPALTGECTPVLHGHVADLFVVPAVADGSIVLHVVAADAPG Sbjct 121 VSGHDVASATTVRAVRRDGRPALTGECTPVLHGHVADLFVVPAVADGSIVLHVVAADAPG 180 Query 181 VTVTPLPSFDITRPVATLRLAGSPAEPLTAGTPDDMERVLDVARVLLAAEMLGGAEACLD 240 VTVTPLPSFDITRPVATLRLAGSPAEPLTAGTPDDMERVLDVARVLLAAEMLGGAEACLD Sbjct 181 VTVTPLPSFDITRPVATLRLAGSPAEPLTAGTPDDMERVLDVARVLLAAEMLGGAEACLD 240 Query 241 LAVQYAGRRTQFDRPIGSFQAVKHACADMMIEIDATRATVMFAAMSAANGDELQTVAPLA 300 LAVQYAGRRTQFDRPIGSFQAVKHACADMMIEIDATRATVMFAAMSAANGDELQTVAPLA Sbjct 241 LAVQYAGRRTQFDRPIGSFQAVKHACADMMIEIDATRATVMFAAMSAANGDELQTVAPLA 300 Query 301 KAQTAETFVLCAGSALQIHGAIAFTWEHDLHLYYRRAKTTEALFGSSARNRALLAERAGL 360 KAQTAETFVLCAGSALQIHGAIAFTWEHDLHLYYRRAKTTEALFGSSARNRALLAERAGL Sbjct 301 KAQTAETFVLCAGSALQIHGAIAFTWEHDLHLYYRRAKTTEALFGSSARNRALLAERAGL 360 Query 361 VKA 363 VKA Sbjct 361 VKA 363 >gi|148823145|ref|YP_001287899.1| acyl-CoA dehydrogenase fadE18 [Mycobacterium tuberculosis F11] gi|148721672|gb|ABR06297.1| acyl-CoA dehydrogenase fadE18 [Mycobacterium tuberculosis F11] Length=363 Score = 718 bits (1853), Expect = 0.0, Method: Compositional matrix adjust. Identities = 361/363 (99%), Positives = 362/363 (99%), Gaps = 0/363 (0%) Query 1 VDFRYSTEQDDFRASLRGFLGRGAPVREMAAADGSDRRLWQRLCTELELPALHVPPEHGG 60 +DFRYSTEQDDFRASLRGFLGRGAPVREMAAADGSDRRLWQRLCTELELPALHVPPEHGG Sbjct 1 MDFRYSTEQDDFRASLRGFLGRGAPVREMAAADGSDRRLWQRLCTELELPALHVPPEHGG 60 Query 61 LGATLVETAIAFAELGRALTPIPFAATVFAIEAILRMGDDEQRKRLLAGLLTGARIGTIA 120 LGATLVETAIAFAELGRALTPIPFAATVFAIEAILRMGDDEQRKRLLAGLLTGARIGTIA Sbjct 61 LGATLVETAIAFAELGRALTPIPFAATVFAIEAILRMGDDEQRKRLLAGLLTGARIGTIA 120 Query 121 VSGHDVASATTVRAVRRDGRPALTGECTPVLHGHVADLFVVPAVADGSIVLHVVAADAPG 180 VSGHDVASATTVRAVRRDGRPALTGECTPVLHGHVADLFVVPAVADGSIVLHVVAADAPG Sbjct 121 VSGHDVASATTVRAVRRDGRPALTGECTPVLHGHVADLFVVPAVADGSIVLHVVAADAPG 180 Query 181 VTVTPLPSFDITRPVATLRLAGSPAEPLTAGTPDDMERVLDVARVLLAAEMLGGAEACLD 240 VTVTPLPSFDITRPV TLRLAGSPAEPLTAGTPDDMERVLDVARVLLAAEMLGGAEACLD Sbjct 181 VTVTPLPSFDITRPVVTLRLAGSPAEPLTAGTPDDMERVLDVARVLLAAEMLGGAEACLD 240 Query 241 LAVQYAGRRTQFDRPIGSFQAVKHACADMMIEIDATRATVMFAAMSAANGDELQTVAPLA 300 LAVQYAGRRTQFDRPIGSFQAVKHACADMMIEIDATRATVMFAAMSAANGDELQTVAPLA Sbjct 241 LAVQYAGRRTQFDRPIGSFQAVKHACADMMIEIDATRATVMFAAMSAANGDELQTVAPLA 300 Query 301 KAQTAETFVLCAGSALQIHGAIAFTWEHDLHLYYRRAKTTEALFGSSARNRALLAERAGL 360 KAQTAETFVLCAGSALQIHGAIAFTWEHDLHLYYRRAKTTEALFGSSARNRALLAERAGL Sbjct 301 KAQTAETFVLCAGSALQIHGAIAFTWEHDLHLYYRRAKTTEALFGSSARNRALLAERAGL 360 Query 361 VKA 363 VKA Sbjct 361 VKA 363 >gi|340626943|ref|YP_004745395.1| putative acyl-CoA dehydrogenase FADE18 [Mycobacterium canettii CIPT 140010059] gi|340005133|emb|CCC44282.1| putative acyl-CoA dehydrogenase FADE18 [Mycobacterium canettii CIPT 140010059] Length=363 Score = 711 bits (1836), Expect = 0.0, Method: Compositional matrix adjust. Identities = 358/363 (99%), Positives = 360/363 (99%), Gaps = 0/363 (0%) Query 1 VDFRYSTEQDDFRASLRGFLGRGAPVREMAAADGSDRRLWQRLCTELELPALHVPPEHGG 60 +DFRYSTEQDDFRASLRGFLGRGAPVREMAAADGSDRRLWQRLCTELELPALHVPPEHGG Sbjct 1 MDFRYSTEQDDFRASLRGFLGRGAPVREMAAADGSDRRLWQRLCTELELPALHVPPEHGG 60 Query 61 LGATLVETAIAFAELGRALTPIPFAATVFAIEAILRMGDDEQRKRLLAGLLTGARIGTIA 120 LGATLVETAIAFAELGRALTPIPFAATVFAIEAILRMGDDEQRKRLLAGLLTGARIGTIA Sbjct 61 LGATLVETAIAFAELGRALTPIPFAATVFAIEAILRMGDDEQRKRLLAGLLTGARIGTIA 120 Query 121 VSGHDVASATTVRAVRRDGRPALTGECTPVLHGHVADLFVVPAVADGSIVLHVVAADAPG 180 VSGHDVASATTVRAVRRDGRPALTGECTPVLHGHVADLFVVPAVADGSIVLHVVAADAPG Sbjct 121 VSGHDVASATTVRAVRRDGRPALTGECTPVLHGHVADLFVVPAVADGSIVLHVVAADAPG 180 Query 181 VTVTPLPSFDITRPVATLRLAGSPAEPLTAGTPDDMERVLDVARVLLAAEMLGGAEACLD 240 VTVTPLPSFDITRPVATLRLAGSPAEPLTAGTPDDMERVLDVARVLLAAEMLGGAEACLD Sbjct 181 VTVTPLPSFDITRPVATLRLAGSPAEPLTAGTPDDMERVLDVARVLLAAEMLGGAEACLD 240 Query 241 LAVQYAGRRTQFDRPIGSFQAVKHACADMMIEIDATRATVMFAAMSAANGDELQTVAPLA 300 LAVQYA R QFDRPIGSFQAVKHACADMMIEIDATRATVMFAAMSAANGDELQTVAPLA Sbjct 241 LAVQYARSRKQFDRPIGSFQAVKHACADMMIEIDATRATVMFAAMSAANGDELQTVAPLA 300 Query 301 KAQTAETFVLCAGSALQIHGAIAFTWEHDLHLYYRRAKTTEALFGSSARNRALLAERAGL 360 KAQTAETFVLCAGSALQIHGAIAFTWEHDLHLYYRRAKT+EALFGSSARNRALLAERAGL Sbjct 301 KAQTAETFVLCAGSALQIHGAIAFTWEHDLHLYYRRAKTSEALFGSSARNRALLAERAGL 360 Query 361 VKA 363 VKA Sbjct 361 VKA 363 >gi|289443413|ref|ZP_06433157.1| acyl-CoA dehydrogenase fadE18 [Mycobacterium tuberculosis T46] gi|308374444|ref|ZP_07436067.2| acyl-CoA dehydrogenase fadE18 [Mycobacterium tuberculosis SUMu006] gi|289416332|gb|EFD13572.1| acyl-CoA dehydrogenase fadE18 [Mycobacterium tuberculosis T46] gi|308341907|gb|EFP30758.1| acyl-CoA dehydrogenase fadE18 [Mycobacterium tuberculosis SUMu006] Length=338 Score = 668 bits (1723), Expect = 0.0, Method: Compositional matrix adjust. Identities = 337/338 (99%), Positives = 338/338 (100%), Gaps = 0/338 (0%) Query 26 VREMAAADGSDRRLWQRLCTELELPALHVPPEHGGLGATLVETAIAFAELGRALTPIPFA 85 +REMAAADGSDRRLWQRLCTELELPALHVPPEHGGLGATLVETAIAFAELGRALTPIPFA Sbjct 1 MREMAAADGSDRRLWQRLCTELELPALHVPPEHGGLGATLVETAIAFAELGRALTPIPFA 60 Query 86 ATVFAIEAILRMGDDEQRKRLLAGLLTGARIGTIAVSGHDVASATTVRAVRRDGRPALTG 145 ATVFAIEAILRMGDDEQRKRLLAGLLTGARIGTIAVSGHDVASATTVRAVRRDGRPALTG Sbjct 61 ATVFAIEAILRMGDDEQRKRLLAGLLTGARIGTIAVSGHDVASATTVRAVRRDGRPALTG 120 Query 146 ECTPVLHGHVADLFVVPAVADGSIVLHVVAADAPGVTVTPLPSFDITRPVATLRLAGSPA 205 ECTPVLHGHVADLFVVPAVADGSIVLHVVAADAPGVTVTPLPSFDITRPVATLRLAGSPA Sbjct 121 ECTPVLHGHVADLFVVPAVADGSIVLHVVAADAPGVTVTPLPSFDITRPVATLRLAGSPA 180 Query 206 EPLTAGTPDDMERVLDVARVLLAAEMLGGAEACLDLAVQYAGRRTQFDRPIGSFQAVKHA 265 EPLTAGTPDDMERVLDVARVLLAAEMLGGAEACLDLAVQYAGRRTQFDRPIGSFQAVKHA Sbjct 181 EPLTAGTPDDMERVLDVARVLLAAEMLGGAEACLDLAVQYAGRRTQFDRPIGSFQAVKHA 240 Query 266 CADMMIEIDATRATVMFAAMSAANGDELQTVAPLAKAQTAETFVLCAGSALQIHGAIAFT 325 CADMMIEIDATRATVMFAAMSAANGDELQTVAPLAKAQTAETFVLCAGSALQIHGAIAFT Sbjct 241 CADMMIEIDATRATVMFAAMSAANGDELQTVAPLAKAQTAETFVLCAGSALQIHGAIAFT 300 Query 326 WEHDLHLYYRRAKTTEALFGSSARNRALLAERAGLVKA 363 WEHDLHLYYRRAKTTEALFGSSARNRALLAERAGLVKA Sbjct 301 WEHDLHLYYRRAKTTEALFGSSARNRALLAERAGLVKA 338 >gi|183982865|ref|YP_001851156.1| acyl-CoA dehydrogenase FadE18 [Mycobacterium marinum M] gi|183176191|gb|ACC41301.1| acyl-CoA dehydrogenase FadE18 [Mycobacterium marinum M] Length=362 Score = 540 bits (1392), Expect = 1e-151, Method: Compositional matrix adjust. Identities = 271/363 (75%), Positives = 306/363 (85%), Gaps = 4/363 (1%) Query 1 VDFRYSTEQDDFRASLRGFLGRGAP---VREMAAADGSDRRLWQRLCTELELPALHVPPE 57 +DFRYSTEQDDFR SLRGFL AP VR++AA G D++LW RLC ELELPALH PPE Sbjct 1 MDFRYSTEQDDFRESLRGFLRDQAPPARVRQVAAVGGHDKKLWHRLCAELELPALHAPPE 60 Query 58 HGGLGATLVETAIAFAELGRALTPIPFAATVFAIEAILRMGDDEQRKRLLAGLLTGARIG 117 +GG G TLVETAIAF ELGRALTP+PFAAT+ AIEAILRMGD EQRK LL+GLL+G RIG Sbjct 61 YGGAGGTLVETAIAFGELGRALTPVPFAATILAIEAILRMGDSEQRKGLLSGLLSGDRIG 120 Query 118 TIAVSGHDVASATTVRAVRRDGRPALTGECTPVLHGHVADLFVVPAVADGSIVLHVVAAD 177 +A +G D+ S T+VRA RRDGRP LTGEC PVLHGHVADLFVVPA +DG+++L+VV A Sbjct 121 ALAAAGPDL-SVTSVRAGRRDGRPVLTGECAPVLHGHVADLFVVPAESDGAVILYVVDAA 179 Query 178 APGVTVTPLPSFDITRPVATLRLAGSPAEPLTAGTPDDMERVLDVARVLLAAEMLGGAEA 237 APGV V LPSFDITRPVA LRL +PAE L A + D++ R+LDVARVLLAAEMLGGAEA Sbjct 180 APGVAVVGLPSFDITRPVAKLRLVRAPAEALAASSADEVARLLDVARVLLAAEMLGGAEA 239 Query 238 CLDLAVQYAGRRTQFDRPIGSFQAVKHACADMMIEIDATRATVMFAAMSAANGDELQTVA 297 CLDLA++YA R QFDRPIGSFQAVKH CADMMIEIDATRA VMFA + AA GDEL A Sbjct 240 CLDLAIEYACSRKQFDRPIGSFQAVKHRCADMMIEIDATRAAVMFAQLCAAGGDELHATA 299 Query 298 PLAKAQTAETFVLCAGSALQIHGAIAFTWEHDLHLYYRRAKTTEALFGSSARNRALLAER 357 PLAKAQ A+T+VLCAGSA+Q+HG IAFTWEHDLHLY+RRAKTTEALFGSSA +R+LLA+R Sbjct 300 PLAKAQAADTYVLCAGSAIQVHGGIAFTWEHDLHLYFRRAKTTEALFGSSAHHRSLLADR 359 Query 358 AGL 360 GL Sbjct 360 VGL 362 >gi|118618310|ref|YP_906642.1| acyl-CoA dehydrogenase FadE18 [Mycobacterium ulcerans Agy99] gi|118570420|gb|ABL05171.1| acyl-CoA dehydrogenase FadE18 [Mycobacterium ulcerans Agy99] Length=362 Score = 539 bits (1389), Expect = 2e-151, Method: Compositional matrix adjust. Identities = 271/363 (75%), Positives = 305/363 (85%), Gaps = 4/363 (1%) Query 1 VDFRYSTEQDDFRASLRGFLGRGAP---VREMAAADGSDRRLWQRLCTELELPALHVPPE 57 +DFRYSTEQDDFR SLRGFL AP VR++AA G D++LW RLC ELELPALH PPE Sbjct 1 MDFRYSTEQDDFRESLRGFLRDQAPPARVRQVAAVGGHDKKLWHRLCAELELPALHAPPE 60 Query 58 HGGLGATLVETAIAFAELGRALTPIPFAATVFAIEAILRMGDDEQRKRLLAGLLTGARIG 117 +GG G TLVETAIAF ELGRALTP+PFAAT+ AIEAILRMGD EQRK LL+GLL+G RIG Sbjct 61 YGGAGGTLVETAIAFGELGRALTPVPFAATILAIEAILRMGDSEQRKGLLSGLLSGDRIG 120 Query 118 TIAVSGHDVASATTVRAVRRDGRPALTGECTPVLHGHVADLFVVPAVADGSIVLHVVAAD 177 +A +G D+ S T+VRA RRDGRP LTGEC PVLHGHVADLFVVPA +DG+++L+VV A Sbjct 121 ALAAAGPDL-SVTSVRAGRRDGRPVLTGECAPVLHGHVADLFVVPAESDGAVILYVVDAA 179 Query 178 APGVTVTPLPSFDITRPVATLRLAGSPAEPLTAGTPDDMERVLDVARVLLAAEMLGGAEA 237 APGV V LPSFDITRPVA LRL +PAE L A + D++ R+LDVARVLLAAEMLGGAEA Sbjct 180 APGVAVVGLPSFDITRPVAKLRLVRAPAEALAASSADEVARLLDVARVLLAAEMLGGAEA 239 Query 238 CLDLAVQYAGRRTQFDRPIGSFQAVKHACADMMIEIDATRATVMFAAMSAANGDELQTVA 297 CLDLA++YA R QFDRPIGSFQAVKH CADMMIEIDATRA VMFA + AA GDEL A Sbjct 240 CLDLAIEYACSRKQFDRPIGSFQAVKHRCADMMIEIDATRAAVMFAQLCAAGGDELHATA 299 Query 298 PLAKAQTAETFVLCAGSALQIHGAIAFTWEHDLHLYYRRAKTTEALFGSSARNRALLAER 357 PLAKAQ A T+VLCAGSA+Q+HG IAFTWEHDLHLY+RRAKTTEALFGSSA +R+LLA+R Sbjct 300 PLAKAQAAGTYVLCAGSAIQVHGGIAFTWEHDLHLYFRRAKTTEALFGSSAHHRSLLADR 359 Query 358 AGL 360 GL Sbjct 360 VGL 362 >gi|289758042|ref|ZP_06517420.1| FadE18 protein [Mycobacterium tuberculosis T85] gi|289713606|gb|EFD77618.1| FadE18 protein [Mycobacterium tuberculosis T85] Length=291 Score = 513 bits (1321), Expect = 2e-143, Method: Compositional matrix adjust. Identities = 258/258 (100%), Positives = 258/258 (100%), Gaps = 0/258 (0%) Query 77 RALTPIPFAATVFAIEAILRMGDDEQRKRLLAGLLTGARIGTIAVSGHDVASATTVRAVR 136 RALTPIPFAATVFAIEAILRMGDDEQRKRLLAGLLTGARIGTIAVSGHDVASATTVRAVR Sbjct 6 RALTPIPFAATVFAIEAILRMGDDEQRKRLLAGLLTGARIGTIAVSGHDVASATTVRAVR 65 Query 137 RDGRPALTGECTPVLHGHVADLFVVPAVADGSIVLHVVAADAPGVTVTPLPSFDITRPVA 196 RDGRPALTGECTPVLHGHVADLFVVPAVADGSIVLHVVAADAPGVTVTPLPSFDITRPVA Sbjct 66 RDGRPALTGECTPVLHGHVADLFVVPAVADGSIVLHVVAADAPGVTVTPLPSFDITRPVA 125 Query 197 TLRLAGSPAEPLTAGTPDDMERVLDVARVLLAAEMLGGAEACLDLAVQYAGRRTQFDRPI 256 TLRLAGSPAEPLTAGTPDDMERVLDVARVLLAAEMLGGAEACLDLAVQYAGRRTQFDRPI Sbjct 126 TLRLAGSPAEPLTAGTPDDMERVLDVARVLLAAEMLGGAEACLDLAVQYAGRRTQFDRPI 185 Query 257 GSFQAVKHACADMMIEIDATRATVMFAAMSAANGDELQTVAPLAKAQTAETFVLCAGSAL 316 GSFQAVKHACADMMIEIDATRATVMFAAMSAANGDELQTVAPLAKAQTAETFVLCAGSAL Sbjct 186 GSFQAVKHACADMMIEIDATRATVMFAAMSAANGDELQTVAPLAKAQTAETFVLCAGSAL 245 Query 317 QIHGAIAFTWEHDLHLYY 334 QIHGAIAFTWEHDLHLYY Sbjct 246 QIHGAIAFTWEHDLHLYY 263 >gi|120404961|ref|YP_954790.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium vanbaalenii PYR-1] gi|119957779|gb|ABM14784.1| acyl-CoA dehydrogenase domain protein [Mycobacterium vanbaalenii PYR-1] Length=365 Score = 502 bits (1292), Expect = 5e-140, Method: Compositional matrix adjust. Identities = 258/365 (71%), Positives = 293/365 (81%), Gaps = 5/365 (1%) Query 1 VDFRYSTEQDDFRASLRGFLGRGAP---VREMAAADGSDRRLWQRLCTELELPALHVPPE 57 +DFRY TE DD RA+LRGFL + AP VRE+AA DG D LW+RLCTELELP LH+ E Sbjct 1 MDFRYHTEHDDLRAALRGFLHQTAPAARVREVAAGDGCDISLWRRLCTELELPGLHLSQE 60 Query 58 HGGLGATLVETAIAFAELGRALTPIPFAATVFAIEAILRMGDDEQRKRLLAGLLTGARIG 117 GG G +LVE AI F ELGRALTP+P AATVFAIEA+LR+GDD QR RLL LL+G RI Sbjct 61 CGGAGGSLVEAAIVFEELGRALTPVPMAATVFAIEAVLRLGDDRQRSRLLPALLSGERIA 120 Query 118 TIAVSGHDV--ASATTVRAVRRDGRPALTGECTPVLHGHVADLFVVPAVADGSIVLHVVA 175 T+A + D + TVRA R GR L+GE +PVLHGHVADLFVVPAVADG + L+VVA Sbjct 121 TLAAARPDALDPARVTVRADRHAGRTELSGESSPVLHGHVADLFVVPAVADGRVALYVVA 180 Query 176 ADAPGVTVTPLPSFDITRPVATLRLAGSPAEPLTAGTPDDMERVLDVARVLLAAEMLGGA 235 ADAPGVTV LPSFD TRPVA LRL +PAEPL AG D +ERVLD ARVLL+AEMLGGA Sbjct 181 ADAPGVTVDRLPSFDTTRPVARLRLQQAPAEPLVAGPHDGIERVLDTARVLLSAEMLGGA 240 Query 236 EACLDLAVQYAGRRTQFDRPIGSFQAVKHACADMMIEIDATRATVMFAAMSAANGDELQT 295 EACL +AV+Y+ R QFDRPIGSFQAVKH+CADMMIEIDATRA VMFAAMSAA+ DEL+ Sbjct 241 EACLAMAVEYSCTREQFDRPIGSFQAVKHSCADMMIEIDATRAAVMFAAMSAADPDELRI 300 Query 296 VAPLAKAQTAETFVLCAGSALQIHGAIAFTWEHDLHLYYRRAKTTEALFGSSARNRALLA 355 APL KAQ A+TF LCAG+A Q+HG IAFTWEHD+HLY+RRAKTTEALFG SA +R+LLA Sbjct 301 TAPLVKAQAADTFTLCAGAAFQVHGGIAFTWEHDMHLYFRRAKTTEALFGGSAHHRSLLA 360 Query 356 ERAGL 360 +R GL Sbjct 361 DRVGL 365 >gi|312196696|ref|YP_004016757.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp. EuI1c] gi|311228032|gb|ADP80887.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp. EuI1c] Length=371 Score = 256 bits (653), Expect = 5e-66, Method: Compositional matrix adjust. Identities = 152/373 (41%), Positives = 215/373 (58%), Gaps = 15/373 (4%) Query 1 VDFRYSTEQDDFRASLRGFLGRGAPV----REMAAADGSDRRLWQRLCTELELPALHVPP 56 +DF +STEQD+ RA +RGFL +P R M +DG D +W+ + +L + L +P Sbjct 1 MDFAFSTEQDELRAVVRGFLADRSPEPDVRRLMETSDGFDPTVWKEMGEDLGILGLAIPE 60 Query 57 EHGGLGATLVETAIAFAELGRALTPIP-FAATVFAIEAILRMGDDEQRKRLLAGLLTGAR 115 E+GG G + E + E GRAL P F++ + A A+L GD+ + L GL +G Sbjct 61 EYGGAGCGIAEVGVVLEEAGRALLCAPYFSSVLLASYALLHSGDEAAKADYLPGLASGQL 120 Query 116 IGTIAVSGHDV---ASATTVRAVRRDGRPALTGECTPVLHGHVADLFVVPAVADGSIVLH 172 GT+A++ D +RA R L G + V+ G AD+ VV A G + L Sbjct 121 RGTLALTEDDGRWDEGGIALRAHRSAAGWTLDGHKSFVIDGGTADVLVVAARTSGGVSLF 180 Query 173 VVAADAPGVTVTPLPSFDITRPVATLRLAGSPAEPLTAGTPDD----MERVLDVARVLLA 228 VV APG+ T + + D+TR A L +G A + G D + RVLD+A V LA Sbjct 181 VVDGAAPGLATTAMATMDLTRKQARLEFSGVRARLI--GVEDGGWPVLSRVLDLAAVGLA 238 Query 229 AEMLGGAEACLDLAVQYAGRRTQFDRPIGSFQAVKHACADMMIEIDATRATVMFAAMSAA 288 AE +GGA +++AV Y R QF R IGSFQAVKH+CA+M+++++ R+ + +AA Sbjct 239 AEQVGGAARVMEMAVDYVKVRHQFGRAIGSFQAVKHSCANMLVDVECARSAAYYGLWTAA 298 Query 289 -NGDELQTVAPLAKAQTAETFVLCAGSALQIHGAIAFTWEHDLHLYYRRAKTTEALFGSS 347 + DE Q A LAKA +E +V CAG +Q+HG I FTWEH HLY RRAK+++ LFG S Sbjct 299 ADSDEQQVAASLAKAYCSEAYVRCAGVNIQLHGGIGFTWEHPAHLYLRRAKSSQLLFGDS 358 Query 348 ARNRALLAERAGL 360 A +R LLA+R G+ Sbjct 359 AFHRDLLAQRVGI 371 >gi|296169402|ref|ZP_06851025.1| acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295895952|gb|EFG75644.1| acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum ATCC BAA-614] Length=378 Score = 250 bits (639), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 161/373 (44%), Positives = 215/373 (58%), Gaps = 13/373 (3%) Query 1 VDFRYSTEQDDFRASLRGFLGRGAP---VRE-MAAADGSDRRLWQRLCTELELPALHVPP 56 +DF S EQDDFR +++ F+ +P VR+ + A G D LW R+ EL LP+L VP Sbjct 6 MDFMLSPEQDDFRQTIQQFVTELSPLAKVRQAVTTAPGYDIDLWSRMSRELGLPSLLVPE 65 Query 57 EHGGLGATLVETAIAFAELGRALTPIPFAATV-FAIEAILRMGDDEQRKRLLAGLLTGAR 115 E+GG AT++E A+A ELGR + P P ATV + IL EQ++ LL + GAR Sbjct 66 EYGGAAATMIEAAVAIEELGRGIVPCPLFATVALGVAPILIAASQEQKRELLPEIAAGAR 125 Query 116 IGTIAVSGH---DVASATTVRAVRRDGRPALTGECTPVLHGHVADLFVVPAVADGSIV-- 170 T A++ D A +RA L+G V+ GH AD +V A+ G Sbjct 126 TVTTAINEPGCVDGFGAVAMRAATNGDAVTLSGTKIHVIDGHSADTLLVLALPPGDSAEP 185 Query 171 -LHVVAADAPGVTVTPLPSFDITRPVATLRLAGSPAEPLT-AGTPDDMERVLDVARVLLA 228 L++V +A G+T T + + DITRP+ATL A PL A + R LDVA+ LLA Sbjct 186 ALYLVDGNAVGLTRTRVETLDITRPLATLTFDAVSAVPLAGAHGVAPIRRALDVAKTLLA 245 Query 229 AEMLGGAEACLDLAVQYAGRRTQFDRPIGSFQAVKHACADMMIEIDATRATVMFAA-MSA 287 AEM+GG E + ++V+YA R QF+RPIGSFQA+KH CA+M IE+D+ RA ++AA ++A Sbjct 246 AEMVGGTEGAMTMSVEYAKVRHQFNRPIGSFQAIKHRCAEMAIELDSARAVTLYAAHLAA 305 Query 288 ANGDELQTVAPLAKAQTAETFVLCAGSALQIHGAIAFTWEHDLHLYYRRAKTTEALFGSS 347 +L AP+A A A F A +QIHG I FTWEHD HLYYRRAK L GS Sbjct 306 EESADLAKAAPIAVATAAAGFDFTASWNVQIHGGIGFTWEHDAHLYYRRAKADRVLLGSV 365 Query 348 ARNRALLAERAGL 360 +A+R GL Sbjct 366 REQWLEVADRIGL 378 >gi|254774665|ref|ZP_05216181.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium avium subsp. avium ATCC 25291] gi|254822241|ref|ZP_05227242.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium intracellulare ATCC 13950] Length=366 Score = 247 bits (630), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 148/350 (43%), Positives = 205/350 (59%), Gaps = 11/350 (3%) Query 6 STEQDDFRASLRGFLGRGAP---VREMAAAD-GSDRRLWQRLCTELELPALHVPPEHGGL 61 S+E D+ R+ +R +L +P VR++ A D G D W+++ EL L + VP GG Sbjct 3 SSEVDELRSVVRDYLSATSPSETVRKLMATDIGYDEASWRQMAGELGLQGIVVPERWGGA 62 Query 62 GATLVETAIAFAELGRALTPIPFAATV-FAIEAILRMGDDEQRKRLLAGLLTGARIGTIA 120 GA +VE A+ F E+GRAL PF ATV A +AIL DD +R + G + G+ T+ Sbjct 63 GAGVVELAVVFEEMGRALVCSPFFATVALATQAILASEDDAAVERFVPGFVDGSTTATLI 122 Query 121 VSGHDVA---SATTVRAVRRDGRPALTGECTPVLHGHVADLFVVPAVADGSIVLHVVAAD 177 ++G A A T+RA RR + GE V+ GH AD+ + PA+ D + L V A Sbjct 123 LNGQLGAWDPDAVTLRADRRGAGYRIRGEAPLVIDGHTADVVLAPAITDAGVSLFAVRAG 182 Query 178 APGVTVTPLPSFDITRPVATLRLAGSPAEPL--TAGTPDDMERVLDVARVLLAAEMLGGA 235 G+ TPL D TR VA ++ G+PAE + G + + R D+A V L AE +G A Sbjct 183 PEGLCRTPLAGLDRTRKVARVQFDGAPAELIGTDGGAANFLARTSDLALVALTAEQVGAA 242 Query 236 EACLDLAVQYAGRRTQFDRPIGSFQAVKHACADMMIEIDATRATVMFAAMSAANGDELQT 295 + CLD+AV YA R QF RPIGSFQAVKH CADM+++++ R+ AA + A D+L T Sbjct 243 QRCLDMAVDYAKNRIQFGRPIGSFQAVKHRCADMLVQVEGARSAQSHAA-AVAGTDDLPT 301 Query 296 VAPLAKAQTAETFVLCAGSALQIHGAIAFTWEHDLHLYYRRAKTTEALFG 345 A +AK +E F+ A ++IHG I FTWEHD HLY RRAK ++ +FG Sbjct 302 AASVAKMVCSEAFLQVALDNMRIHGGIGFTWEHDAHLYVRRAKASQLIFG 351 >gi|300785722|ref|YP_003766013.1| acyl-CoA dehydrogenase [Amycolatopsis mediterranei U32] gi|299795236|gb|ADJ45611.1| acyl-CoA dehydrogenase [Amycolatopsis mediterranei U32] gi|340527185|gb|AEK42390.1| acyl-CoA dehydrogenase [Amycolatopsis mediterranei S699] Length=371 Score = 244 bits (623), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 159/375 (43%), Positives = 209/375 (56%), Gaps = 23/375 (6%) Query 3 FRYSTEQDDFRASLRGFLGRGAP---VREMAAAD-GSDRRLWQRLCTELELPALHVPPEH 58 F EQ+D R+ +R FL +P VR + A D G DR +W ++C EL L L VP E+ Sbjct 3 FALDKEQEDLRSVVREFLTDFSPEPLVRRLMADDRGHDRPMWTKMCGELGLAGLAVPEEY 62 Query 59 GGLGATLVETAIAFAELGRALTPIPFAATVFAIEAILRMGDDEQRKR-LLAGLLTGARIG 117 GG G T VE I ELGRALT PF A+V +L DDE K L L G RIG Sbjct 63 GGAGYTFVELGIVLEELGRALTVTPFLASVVMATTLLLATDDEGAKSDYLPALAEGRRIG 122 Query 118 TIAV---SGHDVASATTVRAVRRDGRPA-----LTGECTPVLHGHVADLFVVPAVAD--- 166 T+A+ SGH T V RPA L G + VL ADL +V A D Sbjct 123 TVALAEDSGH-----WTREGVAMQARPAGAGWVLDGHKSFVLDLMSADLVLVIARVDAEA 177 Query 167 GSIVLHVVAADAPGVTVTPLPSFDITRPVATLRLAGSPAEPLTAGTPDDMERVLDVARVL 226 G+ + V A G+ PLP D TR L A +PA L AG ++R+LD+ + Sbjct 178 GAFGVFAVEPGAAGLERQPLPVLDQTRKQGRLTCADTPAR-LIAGGWAAVDRMLDLTAIA 236 Query 227 LAAEMLGGAEACLDLAVQYAGRRTQFDRPIGSFQAVKHACADMMIEIDATRATVMFAAMS 286 ++AEMLGGA+ L++AV YAG R QF RPIGSFQA+KH CA M++E++A RA V +A + Sbjct 237 VSAEMLGGAQRTLEMAVSYAGVREQFGRPIGSFQAIKHKCATMLMEVEAARAAVYYALWA 296 Query 287 AA-NGDELQTVAPLAKAQTAETFVLCAGSALQIHGAIAFTWEHDLHLYYRRAKTTEALFG 345 A+ +L VA L KA ++ + AG +QIHG I +TWEH HLY++RAK + G Sbjct 297 ASTQAPDLPAVASLTKAFCSDAYQFTAGENIQIHGGIGYTWEHPAHLYFKRAKNSALFLG 356 Query 346 SSARNRALLAERAGL 360 + +R LA+R G+ Sbjct 357 GADHHREQLAQRIGI 371 >gi|297204608|ref|ZP_06922005.1| pimeloyl-CoA dehydrogenase, small subunit [Streptomyces sviceus ATCC 29083] gi|197710676|gb|EDY54710.1| pimeloyl-CoA dehydrogenase, small subunit [Streptomyces sviceus ATCC 29083] Length=385 Score = 242 bits (617), Expect = 8e-62, Method: Compositional matrix adjust. Identities = 162/380 (43%), Positives = 215/380 (57%), Gaps = 18/380 (4%) Query 1 VDFRYSTEQDDFRASLRGFLGRGAPVRE----MAAADGSDRRLWQRLCTELELPALHVPP 56 +DF +S EQ++ ++R FL +P E M +G DR LW+R+ TEL L L VP Sbjct 1 MDFAFSEEQEELGRTVRAFLAHTSPETETRRLMETPEGFDRALWRRMGTELGLQGLAVPE 60 Query 57 EHGGLGATLVETAIAFAELGRALTPIPF-AATVFAIEAILRMGDDEQRKRLLAGLLTGAR 115 E+GG G VE + E+GRAL PF ++ V A +LR D+E RKRLL L G Sbjct 61 EYGGAGCGPVEVGVVMGEMGRALLCAPFLSSAVLATTTLLRCADEEARKRLLPSLACGEL 120 Query 116 IGTIAVSGHDV---ASATTVRAVRRDGRPALTGECTPVLHGHVADLFV----VPAVADGS 168 +GT+A++ A+ + A +G LTG T VL G AD+ + + D Sbjct 121 VGTLALTEDSARWDAAGVRLTARESNGSWLLTGHKTFVLDGATADVVLTVARIENATDDG 180 Query 169 IVLHVVAADAPGVTVTPLPSFDITRPVATLRLAGSPAEPL-TAGTPDDM-ERVLDVARVL 226 I + V DAPG+T PLP+ D TR A L PA L T G D+ VLD A V Sbjct 181 IGVFCVEGDAPGLTRAPLPTMDPTRRQARLDYQDVPATRLRTHGDGWDLVSEVLDRAAVA 240 Query 227 LAAEMLGGAEACLDLAVQYAGRRTQFDRPIGSFQAVKHACADMMIEIDATRATVMFAAMS 286 LAAE +G A LD+AV+YA R QF RPIGSFQAVKH AD+++E+++ RA +A ++ Sbjct 241 LAAEQVGVASRALDMAVEYAKVRHQFGRPIGSFQAVKHLLADVLLEVESARAAAHYALLA 300 Query 287 AANGD----ELQTVAPLAKAQTAETFVLCAGSALQIHGAIAFTWEHDLHLYYRRAKTTEA 342 A N + EL VA LAKA ++ V +Q+HG I FTWEH HLY +RAKT++ Sbjct 301 AENSESADPELPAVASLAKAFCSDACVRATEENIQVHGGIGFTWEHPAHLYLKRAKTSQL 360 Query 343 LFGSSARNRALLAERAGLVK 362 LFG A +R LLA R G+ K Sbjct 361 LFGDPAYHRELLARRIGMDK 380 >gi|300788994|ref|YP_003769285.1| acyl-CoA dehydrogenase [Amycolatopsis mediterranei U32] gi|299798508|gb|ADJ48883.1| acyl-CoA dehydrogenase [Amycolatopsis mediterranei U32] gi|340530626|gb|AEK45831.1| acyl-CoA dehydrogenase [Amycolatopsis mediterranei S699] Length=348 Score = 241 bits (614), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 151/358 (43%), Positives = 206/358 (58%), Gaps = 15/358 (4%) Query 5 YSTEQDDFRASLRGFLGRGAPVR-EMAAADGSDRRLWQRLCTELELPALHVPPEHGGLGA 63 ++ EQ+D RA +R FL A VR + + +G D +W++L +L LP + VP E+GG G Sbjct 4 FTEEQEDLRAVVRRFLADRADVRARLDSGEGHDLAVWRQLADQLGLPGIAVPEEYGGSGG 63 Query 64 TLVETAIAFAELGRALTPIPFAATVFAI-EAILRMGDDEQRKRLLAGLLTGARIGTIAVS 122 VE I E+GR L P PF ATV + +A+ GDD + R L G+ G+ T+AV+ Sbjct 64 GPVELGIVLEEMGRVLLPSPFFATVALVGQALTASGDDAAKSRWLPGIADGSLTATLAVA 123 Query 123 GHDVASATTVRAVRRDGRPALTGECTPVLHGHVADLFVVPAVADGSIVLHVVAADAPGVT 182 S L+G V+ GH ADL +V A L V APGVT Sbjct 124 EE---SGRATDLTTTATGGTLSGTKMFVVDGHTADLLLVVA----RTGLFAVEGTAPGVT 176 Query 183 VTPLPSFDITRPVATLRLAGSPAEPLTAGTPDDMERVLDVARVLLAAEMLGGAEACLDLA 242 T L + D TR +A + G+PA P+ P + LD+A V LAAE +GGA+ACLD+A Sbjct 177 RTRLETLDRTRRLARIDFDGAPAVPIGESPP---RKALDLAVVALAAEQVGGAQACLDMA 233 Query 243 VQYAGRRTQFDRPIGSFQAVKHACADMMIEIDATRATVMFAAMSAANGDELQTVAPLAKA 302 V +A R QFDRPIG+FQA+KH CADM++ I+A R+ V AA + GDEL A +A A Sbjct 234 VGHAKVRVQFDRPIGTFQAIKHKCADMLLAIEAARSAVYHAASA---GDELPVAASVAGA 290 Query 303 QTAETFVLCAGSALQIHGAIAFTWEHDLHLYYRRAKTTEALFGSSARNRALLAERAGL 360 + F A +QIHG + +TWEHD H Y +RAK++E LFG+ A +RA LA+ G+ Sbjct 291 YCSVAFTHAAKENIQIHGGVGYTWEHDAHRYLKRAKSSEQLFGAPAAHRARLADLVGI 348 >gi|297204614|ref|ZP_06922011.1| pimeloyl-CoA dehydrogenase, small subunit [Streptomyces sviceus ATCC 29083] gi|297148735|gb|EFH29096.1| pimeloyl-CoA dehydrogenase, small subunit [Streptomyces sviceus ATCC 29083] Length=374 Score = 236 bits (601), Expect = 5e-60, Method: Compositional matrix adjust. Identities = 165/375 (44%), Positives = 220/375 (59%), Gaps = 16/375 (4%) Query 1 VDFRYSTEQDDFRASLRGFLGRG---APVREMAA-ADGSDRRLWQRLCTELELPALHVPP 56 +D +S EQD+ R +R FL + A VR +AA A G D +W+R+ EL L L VP Sbjct 1 MDLTFSEEQDELRKVVRSFLAKHSDEATVRRLAADAQGHDPVVWRRMAGELGLQGLAVPE 60 Query 57 EHGGLGATLVETAIAFAELGRALTPIPFAATV-FAIEAILRMGDDEQRKRLLAGLLTGAR 115 E+GG G V+ I F E GRAL P+ ATV A+EA+LR D++ R L G+++G Sbjct 61 EYGGSGFGYVDLGIVFEEAGRALLGGPYFATVALAVEALLRCSDEQARHDFLPGIVSGET 120 Query 116 IGTIAV---SGHDVASATTVRAVRRD-GRPALTGECTPVLHGHVADLFVVPA-VADGSIV 170 + T+A+ SGH + AVR + G LTG V GH+ADL +V A G + Sbjct 121 VATLALTEDSGHWDEQGIGLTAVRDETGAWQLTGVKAYVPDGHLADLLLVAARTPSGISL 180 Query 171 LHVVAADAPGVTVTPLPSFDITRPVATLRLAGSPAE---PLTAGTPDDMERVLDVARVLL 227 L V ADAPG+T TPLP+ D TR A + A +PA P P +ER L A VLL Sbjct 181 LAVETADAPGLTRTPLPTLDQTRKQARIEFADTPARLLGPEGTAWPA-LERTLATAAVLL 239 Query 228 AAEMLGGAEACLDLAVQYAGRRTQFDRPIGSFQAVKHACADMMIEIDATRATVM--FAAM 285 AAE +GGA A LD AV YA R Q+ RPIGSFQ +KH CADM++EI++ R+ A+ Sbjct 240 AAEQVGGAAAALDAAVAYAKIREQYGRPIGSFQGIKHKCADMLMEIESARSAAYGGLWAL 299 Query 286 SAANGDELQTVAPLAKAQTAETFVLCAGSALQIHGAIAFTWEHDLHLYYRRAKTTEALFG 345 +G E+ A LA+A +E F A +Q+HG I FTWEH HLY++RAK++E L G Sbjct 300 DEGDGTEITIAAALAQAFCSEAFTKVAADNIQVHGGIGFTWEHPAHLYFKRAKSSEVLLG 359 Query 346 SSARNRALLAERAGL 360 + + +R LLA R G+ Sbjct 360 TPSYHRELLATRLGI 374 >gi|312198857|ref|YP_004018918.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp. EuI1c] gi|311230193|gb|ADP83048.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp. EuI1c] Length=380 Score = 236 bits (601), Expect = 6e-60, Method: Compositional matrix adjust. Identities = 166/377 (45%), Positives = 216/377 (58%), Gaps = 21/377 (5%) Query 3 FRYSTEQDDFRASLRGFLGRGAPVRE----MAAADGSDRRLWQRLCTELELPALHVPPEH 58 F ++ EQ + R ++R FL + AP E M +G D +W +L EL+L L +P E Sbjct 6 FAFTEEQRELRRTVRAFLEQAAPEPEVRRLMETPEGYDPAVWAQLAGELDLVGLVIPEEL 65 Query 59 GGLGATLVETAIAFAELGRALTPIPFAAT-VFAIEAILRMGDDEQRKRLLAGLLTGARIG 117 GG GAT VE AI E+GR L P+ +T V A+ +LR GD +K L G+ G I Sbjct 66 GGAGATFVEVAIVAEEMGRRLLCAPYLSTAVLAVGTLLRSGDAGAQKAWLPGIAAGETIA 125 Query 118 TIAVSGH----DVASATTVRAVRRDGRPALTGECTPVLHGHVADLFVVPAVADGSIVLHV 173 T+A + DV+ T V A DG LTG + VL GH ADL +V A + L Sbjct 126 TLAFAEENGRWDVSGITAVAARSGDGW-TLTGTKSYVLDGHTADLLLVAARGAAGVSLFA 184 Query 174 VAADAPGVTVTPLPSFDITRPVATLRLAGSPAEPLT---AGTPDDMERVLDVARVLLAAE 230 V DAPG+T PL + D TR +A + LAG PA + AG P +E VL++A V LAAE Sbjct 185 VPGDAPGLTRLPLATLDQTRRLARVELAGVPATLVGEDGAGWPV-IEHVLNLAAVALAAE 243 Query 231 MLGGAEACLDLAVQYAGRRTQFDRPIGSFQAVKHACADMMIEIDATRATVMFAAMSAA-- 288 GGAE LD+AVQYA R QF R IGSFQAVKH CADM++E+++ R+ +AA AA Sbjct 244 QAGGAEVALDMAVQYAKDRVQFGRQIGSFQAVKHRCADMLLEVESARSAAYYAAWCAAGT 303 Query 289 -----NGDELQTVAPLAKAQTAETFVLCAGSALQIHGAIAFTWEHDLHLYYRRAKTTEAL 343 + DEL +A +AKA +E + A +Q+HG I FTWEH HLY+RRAK+ E L Sbjct 304 TAGDESADELAKIAAVAKAYCSEAYTQVAADNIQVHGGIGFTWEHSAHLYFRRAKSDELL 363 Query 344 FGSSARNRALLAERAGL 360 FG A R LA G+ Sbjct 364 FGDPAAWRDRLATSIGV 380 >gi|158317323|ref|YP_001509831.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp. EAN1pec] gi|158112728|gb|ABW14925.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EAN1pec] Length=392 Score = 235 bits (600), Expect = 7e-60, Method: Compositional matrix adjust. Identities = 153/387 (40%), Positives = 207/387 (54%), Gaps = 36/387 (9%) Query 5 YSTEQDDFRASLRGFLGRGAPVRE----MAAADGSDRRLWQRLCTELELPALHVPPEHGG 60 +S EQ++ R ++R FL +P E M + DG D +W+++ T+L L LHVP E+GG Sbjct 5 FSDEQEELRRTVRSFLEHASPESEVRRLMESDDGYDPAIWRQMATQLGLQGLHVPEEYGG 64 Query 61 LGATLVETAIAFAELGRALTPIPF-AATVFAIEAILRMGDDEQRKRLLAGLLTGARIGTI 119 G VE I E+G L PF A+ V A A+L + D RK LL GL++G IGT+ Sbjct 65 AGFGYVELGIVLEEMGARLLCAPFLASAVLATGALLAVDDALARKELLPGLVSGTTIGTL 124 Query 120 AVSG-------------------HDVASATTVRAVRRDGRPALTGECTPVLHGHVADLFV 160 A +G + A R L G VL G +ADL + Sbjct 125 AFAGPTGRPEPAGSGGLGPQGGTGAEGGHHGLLAARAASGYTLRGTRHFVLDGALADLIL 184 Query 161 VPAVADGSIVLHVVAADAPGVTVTPLPSFDITRPVATLRLAGSPAEPLTAGTPDD----M 216 V A A+G + L V DA G+T + LP D+TR A L + +PA + G D + Sbjct 185 VTAWAEGGLSLFAVPGDAAGLTRSRLPVMDLTRKQADLTFSDTPARLI--GAEGDAGPVI 242 Query 217 ERVLDVARVLLAAEMLGGAEACLDLAVQYAGRRTQFDRPIGSFQAVKHACADMMIEIDAT 276 ++VL +A V LA E GGA L+ AV++A R QF RPIGSFQAVKH CADM++ ++ + Sbjct 243 DQVLRLACVALANESAGGARTVLEQAVRHAKDRLQFGRPIGSFQAVKHKCADMLVAVEGS 302 Query 277 RATVMFAAMSAA------NGDELQTVAPLAKAQTAETFVLCAGSALQIHGAIAFTWEHDL 330 ++ AA AA N D L A +AKA E + A +QIHG I FTWEH Sbjct 303 KSVAYHAAQVAAGNSAAGNTDRLARAASMAKAYVGEAYFSAAADNIQIHGGIGFTWEHSA 362 Query 331 HLYYRRAKTTEALFGSSARNRALLAER 357 HLY++RAKT+E LFG +R LLA+R Sbjct 363 HLYFKRAKTSELLFGDPVHHRGLLADR 389 >gi|269126119|ref|YP_003299489.1| acyl-CoA dehydrogenase domain-containing protein [Thermomonospora curvata DSM 43183] gi|268311077|gb|ACY97451.1| acyl-CoA dehydrogenase domain protein [Thermomonospora curvata DSM 43183] Length=369 Score = 235 bits (599), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 156/367 (43%), Positives = 216/367 (59%), Gaps = 15/367 (4%) Query 6 STEQDDFRASLRGFLGRGAP---VRE-MAAADGSDRRLWQRLCTELELPALHVPPEHGGL 61 + EQ++ RA+LR F +P VR MA A+G D +W++L +L +P L +P E+GG Sbjct 6 TEEQEELRATLRRFFADKSPSERVRHLMATAEGYDPAVWRQLAEQLGVPGLAIPEEYGGA 65 Query 62 GATLVETAIAFAELGRALTPIPFAATVFAIEAILRMGDDEQRKRLLAGLLTGARIGTIAV 121 G + E I E GRAL P + A +A+L D+E ++ LL + G RI T+AV Sbjct 66 GFGMRELVIVMEEAGRALACAPLLSVALAAQALLACDDEEAKRELLPQIAAG-RIATVAV 124 Query 122 SGHD---VASATTVRAVRRDGRPALTGECTPVLHGHVADLFVVPAVADGSIVLHVVAADA 178 + D A A A G L G + V+ GH ADL +V A A G + L V DA Sbjct 125 AEEDGRWAAEAIAATAASAAGGHRLEGVKSFVIDGHTADLLLVLAQAPGGLSLLAVDGDA 184 Query 179 PGVTVTPLPSFDITRPVATLRLAGSPAEPLTAGTPDDMERVLDVARVLLAAEML----GG 234 P +T T LP+ D TR +A L LAG+PA + G D ERVL + A + GG Sbjct 185 PALTRTLLPTMDQTRKLARLELAGTPARLI--GREGDGERVLARLLDVAALALAAEQLGG 242 Query 235 AEACLDLAVQYAGRRTQFDRPIGSFQAVKHACADMMIEIDATRATVMFAAMSA-ANGDEL 293 A+ L+++V+YA R QF RPIGSFQA+KH CAD+++EI++ R+ V++AA +A N EL Sbjct 243 AQRVLEMSVEYAKVRHQFGRPIGSFQAIKHKCADLLMEIESARSAVLYAATAADENPAEL 302 Query 294 QTVAPLAKAQTAETFVLCAGSALQIHGAIAFTWEHDLHLYYRRAKTTEALFGSSARNRAL 353 VA LA+A T+E F AG +QIHG I FTWEHD HLY++RAK+++ L G A +R Sbjct 303 PVVAALAQAYTSEAFFHAAGENIQIHGGIGFTWEHDAHLYFKRAKSSQLLLGGPAHHRER 362 Query 354 LAERAGL 360 +A+ GL Sbjct 363 VAQLIGL 369 >gi|111222877|ref|YP_713671.1| putative acyl-CoA dehydrogenase [Frankia alni ACN14a] gi|111150409|emb|CAJ62107.1| putative acyl-CoA dehydrogenase [Frankia alni ACN14a] Length=392 Score = 232 bits (592), Expect = 6e-59, Method: Compositional matrix adjust. Identities = 154/354 (44%), Positives = 191/354 (54%), Gaps = 11/354 (3%) Query 1 VDFRYSTEQDDFRASLRGFLGRGAPV----REMAAADGSDRRLWQRLCTELELPALHVPP 56 + FRYS E ++ R +R + A R+MA G D WQRLC ELELPAL VP Sbjct 1 MQFRYSPEHEELRRGIRRYFAEVADADAVRRDMATPTGWDPVTWQRLCDELELPALAVPE 60 Query 57 EHGGLGATLVETAIAFAELGRALTPIPFAATVFAIEAILRMGDDEQRKRLLAGLLTGARI 116 E+GG G LVE IA +E GR+L P +T A +A+L GD + L GL G Sbjct 61 EYGGAGFGLVELGIALSEAGRSLLCAPLLSTSIATQALLHAGDPDAAAAHLPGLAAGTTT 120 Query 117 GTIAV--SGHDVASATTVRAVRRDGRPALTGECTPVLHGHVADLFVVPAVADGSIVLHVV 174 GT+A G + T A R AL+G VL G A LFVV A L +V Sbjct 121 GTLAAREPGRPWDATPTTTAERAGDGWALSGVKDWVLDGQSAGLFVVTATTAAGTSLFLV 180 Query 175 AADAPGVTVTPLPSFDITRPVATLRLAGSPAEPL---TAGTPDDMERVLDVARVLLAAEM 231 A A G+ V LP D TR V + L G+P L AG P + R LD A LLAAE Sbjct 181 DAGAAGLAVEALPVVDPTRQVTRVTLTGTPGVLLGADGAGAP-GLARTLDAAVTLLAAEQ 239 Query 232 LGGAEACLDLAVQYAGRRTQFDRPIGSFQAVKHACADMMIEIDATRATVMFAAMSAANGD 291 LG AEA L AV YA +R QF RPIGSFQA+KH A +++E++A + VM+AA +A Sbjct 240 LGVAEAALASAVDYAKQREQFGRPIGSFQAIKHKLATVLLEVEAATSAVMYAAWTADESP 299 Query 292 -ELQTVAPLAKAQTAETFVLCAGSALQIHGAIAFTWEHDLHLYYRRAKTTEALF 344 EL VA +A +E +L AG +Q+HG I FTWEH HLY +RA T L Sbjct 300 AELPEVASIAGLTCSEAALLAAGENVQVHGGIGFTWEHSAHLYLKRATTDRLLL 353 >gi|111223285|ref|YP_714079.1| putative acyl-CoA dehydrogenase [Frankia alni ACN14a] gi|111150817|emb|CAJ62521.1| putative acyl-CoA dehydrogenase [Frankia alni ACN14a] Length=388 Score = 231 bits (589), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 156/371 (43%), Positives = 206/371 (56%), Gaps = 16/371 (4%) Query 3 FRYSTEQDDFRASLRGFLGRGAPV----REMAAADGSDRRLWQRLCTELELPALHVPPEH 58 F ++ + + R+++R F+ P R MAA +R +W+R+ EL L L VP EH Sbjct 21 FEFTDDHEALRSTVRAFVEETFPEAQVRRLMAAPSALERPVWERMARELGLQGLVVPEEH 80 Query 59 GGLGATLVETAIAFAELGRALTPIPFAATVFAIEAILRMGDDEQRKRLLAGLLTGARIGT 118 GG GA VE AI E GR L P+PF +T A A L GD L + G + T Sbjct 81 GGAGAGPVELAIVLEEFGRRLVPVPFLSTALATIA-LTGGDRAVTSGHLEAVAEGRVVAT 139 Query 119 IAVS----GHDVASATTVRAVRRDGRPA-LTGECTPVLHGHVADLFVVPAVADGSIVLHV 173 +AV+ G D A DG LTG + V G ADL VV A + + L Sbjct 140 VAVAEDGGGWDAAGVRCSAVGDGDGGGWRLTGTKSFVPDGLAADLLVVAARTEAGVGLFA 199 Query 174 VAADAPGVTVTPLPSFDITRPVATLRLAGSPAEPLTAGTPDD---MERVLDVARVLLAAE 230 V A GV+ L FD+TR +A +RL G A PLTA P D +R LD AR+ +AAE Sbjct 200 VDGAADGVSRAALEVFDLTRRLARVRLDGVAATPLTA--PADEAAFDRFLDAARIAVAAE 257 Query 231 MLGGAEACLDLAVQYAGRRTQFDRPIGSFQAVKHACADMMIEIDATRATVMFAAMSAA-N 289 +GGA+ L +AV YA R QF R IGSFQAVKH CAD +++++ R+ + A + A + Sbjct 258 QVGGADFTLAMAVGYAKERVQFGRAIGSFQAVKHLCADAFVDVESARSAAYYGAWAVAQD 317 Query 290 GDELQTVAPLAKAQTAETFVLCAGSALQIHGAIAFTWEHDLHLYYRRAKTTEALFGSSAR 349 E+ TVAPLAKA +E F A + +Q+HG I+FT+EH HLYYRRAK+ L+GS Sbjct 318 SPEVPTVAPLAKAFCSEAFFATARTNMQVHGGISFTYEHPAHLYYRRAKSGVQLWGSPRA 377 Query 350 NRALLAERAGL 360 +R LLA R GL Sbjct 378 HRDLLATRIGL 388 >gi|288918615|ref|ZP_06412964.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EUN1f] gi|288350015|gb|EFC84243.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EUN1f] Length=398 Score = 230 bits (586), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 161/392 (42%), Positives = 210/392 (54%), Gaps = 42/392 (10%) Query 5 YSTEQDDFRASLRGFLGRGAPVRE----MAAADGSDRRLWQRLCTELELPALHVPPEHGG 60 +S EQ++ R ++R FL R +P E M ADG D +W+++ +L L LHVP E+GG Sbjct 5 FSDEQEELRRTVRSFLERTSPESEVRRLMETADGYDPAVWRQMAEQLGLQGLHVPAEYGG 64 Query 61 LGATLVETAIAFAELGRALTPIPF-AATVFAIEAILRMGDDEQRKRLLAGLLTGARIGTI 119 G VE I E+G L PF A+ V A A+L D R LL GL+ G+ IGT+ Sbjct 65 SGFGFVELGIVLEEMGAFLLCAPFLASAVLATGALLDAADPAARAELLPGLVDGSSIGTL 124 Query 120 AV-----------------------------SGHDVASATTVRAVRRDGRPALTGECTPV 150 A +GH R+ DG L G V Sbjct 125 AFAGPTGRVDTAPAPAPATTAGGGSTGSAEAAGHGGPLIVATRSGSGDGGYTLRGTRHFV 184 Query 151 LHGHVADLFVVPAVADGSIVLHVVAADAPGVTVTPLPSFDITRPVATLRLAGSPAEPLTA 210 L G VADL +V A ADG + L V+ DAPG+ +PLP D+TR A L +G+PA + Sbjct 185 LDGAVADLLLVTAWADGGLSLFAVSGDAPGLIRSPLPVMDLTRKQADLTFSGTPARLI-- 242 Query 211 GTPDD----MERVLDVARVLLAAEMLGGAEACLDLAVQYAGRRTQFDRPIGSFQAVKHAC 266 G D + RVL +A V LA E GGA A L AV+YA R QF RPIGS+QAVKH+C Sbjct 243 GAEGDAGPLLTRVLRLACVALANESTGGARAVLAQAVRYARERVQFGRPIGSYQAVKHSC 302 Query 267 ADMMIEIDATRATVMFAAMSAANGD--ELQTVAPLAKAQTAETFVLCAGSALQIHGAIAF 324 ADM++ ++ +R+ AA AA+GD L A +AKA E + A +QIHG I F Sbjct 303 ADMLVAVEGSRSAAYHAAQVAASGDARLLARAAAMAKAYVGEAYFSAAAENIQIHGGIGF 362 Query 325 TWEHDLHLYYRRAKTTEALFGSSARNRALLAE 356 TWEH HLY++RAKT+E LFG +R LLA+ Sbjct 363 TWEHPAHLYFKRAKTSELLFGDPVHHRGLLAD 394 >gi|300785754|ref|YP_003766045.1| acyl-CoA dehydrogenase [Amycolatopsis mediterranei U32] gi|299795268|gb|ADJ45643.1| acyl-CoA dehydrogenase [Amycolatopsis mediterranei U32] gi|340527217|gb|AEK42422.1| acyl-CoA dehydrogenase [Amycolatopsis mediterranei S699] Length=379 Score = 225 bits (574), Expect = 7e-57, Method: Compositional matrix adjust. Identities = 159/369 (44%), Positives = 202/369 (55%), Gaps = 14/369 (3%) Query 6 STEQDDFRASLRGFLGRGAPV----REMAAADGSDRRLWQRLCTELELPALHVPPEHGGL 61 S EQ R LR FLG+ + R+MA G D +W++L EL LP L +P E+GG Sbjct 11 SEEQLQLREVLRAFLGKRSAEPDVRRQMATEAGYDAEVWRQLSGELGLPGLAIPEEYGGS 70 Query 62 GATLVETAIAFAELGRALTPIPFAATV-FAIEAILRMGDDEQRKRLLAGLLTGARIGTIA 120 G E + F E+GRAL P+ TV A E ++R GD+ K LL G+ +G I +A Sbjct 71 GFGCAELGLVFEEMGRALLCAPYFGTVALAAEVLVRAGDESAAKDLLPGIASGETIAALA 130 Query 121 VS---GHDVASATTVRAVRRDGRPALTGECTPVLHGHVADLFVVPAVADGSIVLHVV--A 175 ++ G S T RA R LTG T VL GH ADL +V A D I L V A Sbjct 131 LTEPAGRWDESGVTTRAGRGADGWRLTGTKTYVLDGHTADLLLVVARTDAGIALFAVDTA 190 Query 176 ADAPGVTVTPLPSFDITRPVATLRLAGSPAEPL--TAGTPDDMERVLDVARVLLAAEMLG 233 ++ G+ T LP+ D TR A L PA + G +ER L A VLLAAE LG Sbjct 191 SEPAGLRRTALPALDQTRKQARLDFDAVPARLVGEAGGAWPAVERTLAAAAVLLAAEQLG 250 Query 234 GAEACLDLAVQYAGRRTQFDRPIGSFQAVKHACADMMIEIDATRATVMFAAMSAANGD-- 291 GA L+LAV YA R Q+ R IGSFQAVKH ADM+ +++ R+ V + A GD Sbjct 251 GASRALELAVDYAKIREQYGRAIGSFQAVKHRLADMLTDVECARSAVQDGLRALAGGDTT 310 Query 292 ELQTVAPLAKAQTAETFVLCAGSALQIHGAIAFTWEHDLHLYYRRAKTTEALFGSSARNR 351 EL T A +AKA +E F A A+Q+HG I FTWEH LY++RAK +E L G+ A +R Sbjct 311 ELLTAASVAKAFCSEVFTRVAAGAVQVHGGIGFTWEHPAQLYFKRAKGSEVLLGTPAEHR 370 Query 352 ALLAERAGL 360 A LA GL Sbjct 371 ARLAGLLGL 379 >gi|119504197|ref|ZP_01626278.1| putative acyl-CoA dehydrogenase family protein [marine gamma proteobacterium HTCC2080] gi|119460200|gb|EAW41294.1| putative acyl-CoA dehydrogenase family protein [marine gamma proteobacterium HTCC2080] Length=383 Score = 219 bits (559), Expect = 4e-55, Method: Compositional matrix adjust. Identities = 132/377 (36%), Positives = 204/377 (55%), Gaps = 28/377 (7%) Query 1 VDFRYSTEQDDFRASLRGFLGRGAP---VRE-MAAADGSDRRLWQRLCTELELPALHVPP 56 ++F ++ EQ + S+ GFL A VR+ MA+ G D LWQ++C E+ A+ VP Sbjct 1 MNFSFTDEQLMLKDSVEGFLTENADSGIVRQAMASESGVDENLWQKICAEMYWQAILVPE 60 Query 57 EHGGLGATLVETAIAFAELGRALTPIPFAATVFAIEAILRMGDDEQRKRLLAGLLTGARI 116 E GGLG LVE I ++GR LTP+P AA + + A+ + D Q LLAGL G + Sbjct 61 ECGGLGLGLVEAVIVLEQMGRFLTPVPLAAGIQSALALRTLADQLQAHTLLAGLAEGRLL 120 Query 117 G--------TIAVSGHDVASATTVRAVRRDGRPALTGECTPVLHGHVADLFVVPAVADGS 168 G + SG V + +TV +L+GE + G +A +V A Sbjct 121 GLAHTAARPSWGASGVGVIANSTVNGW------SLSGEARFIATGDLATELLVVAKIGSD 174 Query 169 IVLHVVAADAPGVTVTPLPSFDITRPVATLRLAGSPAEP---LTAGTPDDMERVLDVARV 225 + L +AAD GV ++ +P+ D TRP+ L+L +P L+ + +E VLD +R+ Sbjct 175 LGLFRLAADQTGVALSKMPTMDQTRPMGVLQLHDVTVDPESCLSLDWAEQLEAVLDYSRI 234 Query 226 LLAAEMLGGAEACLDLAVQYAGRRTQFDRPIGSFQAVKHACADMMIEIDATRATVMFAA- 284 L AE +G A+A LD +V Y R QF R I S+QA+KH ADMM+++++ R+ + +AA Sbjct 235 ALGAEQVGCAQASLDQSVAYVSERVQFGRTIASYQAIKHKAADMMLKVESARSLLYYAAC 294 Query 285 ------MSAANGDELQTVAPLAKAQTAETFVLCAGSALQIHGAIAFTWEHDLHLYYRRAK 338 AA+ ++LQ A + + + CAG+ +Q+HG + T E+D+ LY++RA+ Sbjct 295 VGDEALTDAASSEDLQEAAAMLASSAGDAAFFCAGTGIQLHGGVGITEEYDIQLYFKRAR 354 Query 339 TTEALFGSSARNRALLA 355 + EA G R +LA Sbjct 355 SMEAYLGRPDEQREVLA 371 >gi|77361054|ref|YP_340629.1| acyl-CoA dehydrogenase [Pseudoalteromonas haloplanktis TAC125] gi|76875965|emb|CAI87187.1| putative acyl-CoA dehydrogenase family protein [Pseudoalteromonas haloplanktis TAC125] Length=375 Score = 218 bits (556), Expect = 9e-55, Method: Compositional matrix adjust. Identities = 128/348 (37%), Positives = 190/348 (55%), Gaps = 21/348 (6%) Query 29 MAAADGSDRRLWQRLCTELELPALHVPPEHGGLGATLVETAIAFAELGRALTPIPFAATV 88 M G D ++WQR+C E+ A+H+P E+GG+G V+ + ++GR L PF +TV Sbjct 23 MDTEQGFDPQIWQRICEEMYWQAIHIPEEYGGMGLGYVDLVVMLEQMGRYLLCSPFFSTV 82 Query 89 -FAIEAILRMGDDEQRKRLLAGLLTGARIGTIA-VSGHDVASATTVRAV--RRDGRPALT 144 A A++ G DEQ+++ L + G+ T+A S + AT V+ + + L Sbjct 83 CLASNALIVAGTDEQKQQYLTQICEGSLTATLAYTSKNGQWDATAVQGIVTAQGDDYVLN 142 Query 145 GECTPVLHGHVADLFVVPAVADGS-----IVLHVVAADAPGVTVTPLPSFDITRPVA--- 196 G VL GH A L +V A ++GS I L + +D PGV T LP+ D TR A Sbjct 143 GTYRYVLDGHTAQLLIVAARSEGSEGEQGISLFAIDSDTPGVKRTWLPTMDQTRKQAEIV 202 Query 197 --TLRLAGSPAEPLTAGTPDDMERVLDVARVLLAAEMLGGAEACLDLAVQYAGRRTQFDR 254 +R++ S + +VL +A + +AAE +GG++ LDL V+Y R QF R Sbjct 203 FDNVRVSSSQLMGEENNAWSQLNKVLQLAAIAIAAEQVGGSQQVLDLTVEYTKERVQFGR 262 Query 255 PIGSFQAVKHACADMMIEIDATRATVMFAAMSAAN-------GDELQTVAPLAKAQTAET 307 PI FQAVKH ADMM+ + R+ V +AA A DEL A +AK+ +E Sbjct 263 PIAGFQAVKHQAADMMLRTEVARSAVYYAACVAQEALSGGLLADELGEAASVAKSYCSEG 322 Query 308 FVLCAGSALQIHGAIAFTWEHDLHLYYRRAKTTEALFGSSARNRALLA 355 + AG ALQ+HG + FTWE+D+HLY++RAK++E G +A +R +A Sbjct 323 YFKNAGDALQLHGGVGFTWEYDVHLYFKRAKSSELFLGDAAYHREHVA 370 >gi|342857570|ref|ZP_08714226.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium colombiense CECT 3035] gi|342134903|gb|EGT88069.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium colombiense CECT 3035] Length=371 Score = 218 bits (555), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 143/351 (41%), Positives = 199/351 (57%), Gaps = 11/351 (3%) Query 6 STEQDDFRASLRGFLGRGAP---VREMAAAD-GSDRRLWQRLCTELELPALHVPPEHGGL 61 + E DD R +R +L +P VR + A D G D W+++ EL L + VP GG Sbjct 3 TNELDDLRGVVREYLAATSPSETVRRLMATDTGYDEVSWRQMAGELGLHGIAVPERWGGG 62 Query 62 GATLVETAIAFAELGRALTPIPFAATV-FAIEAILRMGDDEQRKRLLAGLLTGARIGTIA 120 GA +VE A+ F E+GRAL+ PF ATV A +AIL DD ++L+ G + G+ T+ Sbjct 63 GAGVVELAVVFEEMGRALSCSPFFATVGLATQAILASDDDAAVEQLIPGFIDGSSTATLI 122 Query 121 VSG---HDVASATTVRAVRRDGRPALTGECTPVLHGHVADLFVVPAVADGSIVLHVVAAD 177 ++G A T+RA R + GE V+ GH AD+ + A I L V A Sbjct 123 LNGRLGEWDPDAVTLRADRTRSGYRIHGEAPLVIDGHTADVVLAAARTTAGISLFAVRAG 182 Query 178 APGVTVTPLPSFDITRPVATLRLAGSPAEPL--TAGTPDDMERVLDVARVLLAAEMLGGA 235 APG+ T L D TR VA+++ + AE + + R D+A L+AE +G A Sbjct 183 APGLRRTLLAGLDRTRKVASVQFDDAQAELIGRDGEAASFLARTSDLALTALSAEQVGAA 242 Query 236 EACLDLAVQYAGRRTQFDRPIGSFQAVKHACADMMIEIDATRATVMFAAMSAANGDELQT 295 + CLD+AV YA R QF RPIGSFQAVKH CADM+++++ R+ AA +AA D+L T Sbjct 243 QRCLDMAVDYAKNRIQFGRPIGSFQAVKHRCADMLVQVEGARSAASHAADAAAT-DDLPT 301 Query 296 VAPLAKAQTAETFVLCAGSALQIHGAIAFTWEHDLHLYYRRAKTTEALFGS 346 A +AK +E F+ A ++IHG I FTWEHD HL+ RRAK T+ +FG+ Sbjct 302 AASVAKMVCSEAFMQVALDNMRIHGGIGFTWEHDAHLFVRRAKATQLIFGA 352 >gi|146275986|ref|YP_001166146.1| acyl-CoA dehydrogenase domain-containing protein [Novosphingobium aromaticivorans DSM 12444] gi|145322677|gb|ABP64620.1| acyl-CoA dehydrogenase domain protein [Novosphingobium aromaticivorans DSM 12444] Length=351 Score = 215 bits (547), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 140/359 (39%), Positives = 186/359 (52%), Gaps = 20/359 (5%) Query 1 VDFRYSTEQDDFRASLRGFLGRGAP---VREMAAADGSDRRLWQRLCTELELPALHVPPE 57 ++F ++ EQ + R F A R+ A+DG DR LW CTEL L + VP E Sbjct 1 MEFAFTEEQAMIAETARAFFAENATSERTRKAMASDGVDRELWSSFCTELGLAGIGVPEE 60 Query 58 HGGLGATLVETAIAFAELGRALTPIPFAATVFAIEAILRMGDDEQRKRLLAGLLTGARIG 117 GG+G +VE A+ G + +P A++ G DEQR R L L+ G I Sbjct 61 MGGVGLGMVEFALIAEAAGAQVAALPLLGNARVSHALVAGGTDEQRVRWLPALVAGEAIA 120 Query 118 TIAVSGHDVASATTVRAVRRDGRPALTGECTPVLHGHVADLFVVPAVADGSIVLHVVAAD 177 T S TV G L+G HG ADL V+ A +V AD Sbjct 121 TATWS-----DDFTV------GEGKLSGTFRFAPHGGAADLLVLAA----GDRCWLVEAD 165 Query 178 APGVTVTPLPSFDITRPVATLRLAGSPAEPLTAGTPDDMERVLDVARVLLAAEMLGGAEA 237 APGV+V + D TRP+AT+ L + AEP + + LAAE LGGA+A Sbjct 166 APGVSVVQHVTMDQTRPLATITLDNAAAEPFADHAAALHALHV-TGWLCLAAEALGGAQA 224 Query 238 CLDLAVQYAGRRTQFDRPIGSFQAVKHACADMMIEIDATRATVMFAAMSAANG-DELQTV 296 LD V Y+ R QF R IGSFQA KH ADMMIEI+ R+ V +AA + G DE Q Sbjct 225 ALDRTVAYSKERVQFGRQIGSFQAYKHRLADMMIEIEQARSAVYWAACAVDEGSDEAQLA 284 Query 297 APLAKAQTAETFVLCAGSALQIHGAIAFTWEHDLHLYYRRAKTTEALFGSSARNRALLA 355 AKA A+TF +CAG+ +Q+HG I FTWEHD HL+++RA++ ++ G S +R +A Sbjct 285 LHSAKAFCADTFHMCAGNMIQLHGGIGFTWEHDAHLFFKRARSIGSMLGDSQWHREQIA 343 >gi|40062860|gb|AAR37731.1| acyl-CoA dehydrogenase, putative [uncultured marine bacterium 442] Length=373 Score = 214 bits (546), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 130/366 (36%), Positives = 198/366 (55%), Gaps = 28/366 (7%) Query 12 FRASLRGFLGRGAP---VRE-MAAADGSDRRLWQRLCTELELPALHVPPEHGGLGATLVE 67 + S+ GFL A VR+ MA+ G D LWQ++C E+ A+ VP E GGLG LVE Sbjct 2 LKDSVEGFLTENADSGIVRQAMASESGVDENLWQKICAEMYWQAILVPEECGGLGLGLVE 61 Query 68 TAIAFAELGRALTPIPFAATVFAIEAILRMGDDEQRKRLLAGLLTGARIG--------TI 119 I ++GR LTP+P AA + + A+ + D Q LLAGL G +G + Sbjct 62 AVIVLEQMGRFLTPVPLAAGIQSALALRTLADQPQAHTLLAGLAEGRLLGLAHTAARPSW 121 Query 120 AVSGHDVASATTVRAVRRDGRPALTGECTPVLHGHVADLFVVPAVADGSIVLHVVAADAP 179 VSG V + +TV +L+GE + G +A +V A + L +AAD Sbjct 122 GVSGVGVIANSTVNGW------SLSGEARFIATGDLATELLVVAKIGSDLGLFRLAADQT 175 Query 180 GVTVTPLPSFDITRPVATLRLAGSPAEP---LTAGTPDDMERVLDVARVLLAAEMLGGAE 236 GV ++ +P+ D TRP+ L+L +P L+ + +E VLD +R+ L AE +G A+ Sbjct 176 GVALSKMPTMDQTRPMGILQLHDVTVDPESCLSLDWAEQLEAVLDYSRIALGAEQVGCAQ 235 Query 237 ACLDLAVQYAGRRTQFDRPIGSFQAVKHACADMMIEIDATRATVMFAA-------MSAAN 289 A LD +V Y R QF R I S+QA+KH ADMM+++++ R+ + +AA AA+ Sbjct 236 ASLDQSVAYVSERVQFGRTIASYQAIKHKAADMMLKVESARSLLYYAACVGDEALTDAAS 295 Query 290 GDELQTVAPLAKAQTAETFVLCAGSALQIHGAIAFTWEHDLHLYYRRAKTTEALFGSSAR 349 ++LQ A + + + CAG+ +Q+HG + T E+D+ LY++RA++ EA G Sbjct 296 SEDLQEAAAMLASSAGDAAFFCAGTGIQLHGGVGITEEYDIQLYFKRARSMEAYLGRPDE 355 Query 350 NRALLA 355 R +LA Sbjct 356 QREVLA 361 >gi|304312376|ref|YP_003811974.1| Predicted acyl-CoA dehydrogenase [gamma proteobacterium HdN1] gi|301798109|emb|CBL46331.1| Predicted acyl-CoA dehydrogenase [gamma proteobacterium HdN1] Length=407 Score = 210 bits (534), Expect = 3e-52, Method: Compositional matrix adjust. Identities = 143/398 (36%), Positives = 199/398 (50%), Gaps = 44/398 (11%) Query 1 VDFRYSTEQDDFRASLRGFLGRG---APVRE-MAAADGSDRRLWQRLCTELELPALHVPP 56 ++F ++ EQ R ++ FL A VR M +A G D LW LC +L H+P Sbjct 1 MEFAFTDEQKMIRDTVESFLAENSTSAAVRSAMESAQGFDPALWNTLCNDLYWQGTHIPV 60 Query 57 EHGGLGATLVETAIAFAELGRALTPIPFAATV-FAIEAILRMGDDEQRKRLLAGLLTGAR 115 E+GGLG VE ++GR L PF +TV A A+L GD Q+ LA + G Sbjct 61 EYGGLGLGYVELVAMLEQMGRFLLCSPFYSTVCLAANALLVAGDSYQKTDYLAKICEG-E 119 Query 116 IGTIAVS--------GHDVASATTVRAVRRDGRPALTGECTPVLHGHVADLFVVPA---- 163 T+A + G ASA VR D + L G V G AD V+ A Sbjct 120 TATLAWASRSAAQAGGRWDASAVEATVVRHDEQFQLNGRYRYVTDGASADWLVLAARTPN 179 Query 164 -VADGSIVLHVVAADAPGVTVTPLPSFDITRPVATLRLAGSPAEPLTA------GTPDDM 216 + I L +VAAD G+ LP+ D TR A + + + P+ A + Sbjct 180 TTGNSGISLFIVAADQAGIQRNALPTMDQTRRQAEI-IVENLNVPIAALMGRFGEAGGAL 238 Query 217 ERVLDVARVLLAAEMLGGAEACLDLAVQYAGRRTQFDRPIGSFQAVKHACADMMIEIDAT 276 E VLD+A + LAAE +GGA+ CLD+AV Y R QF R I SFQA+KH ADMM ++ Sbjct 239 ETVLDLATIALAAEQMGGAQQCLDMAVAYTKERVQFGRSIASFQAIKHMAADMMTRVEVA 298 Query 277 RATVMFAA------MSAANG------------DELQTVAPLAKAQTAETFVLCAGSALQI 318 R+ V +AA + A NG EL A +AK+ ++ + A ALQ+ Sbjct 299 RSGVYYAACVAQEKLDALNGLHATLVGGVSSAGELPEAASIAKSYCSDAYFRNAADALQM 358 Query 319 HGAIAFTWEHDLHLYYRRAKTTEALFGSSARNRALLAE 356 HG + FTWE+D+HL+++RAK TE G++A +R LA+ Sbjct 359 HGGVGFTWEYDVHLHFKRAKATEHFLGNAAWHRERLAQ 396 >gi|262200923|ref|YP_003272131.1| acyl-CoA dehydrogenase domain-containing protein [Gordonia bronchialis DSM 43247] gi|262084270|gb|ACY20238.1| acyl-CoA dehydrogenase domain protein [Gordonia bronchialis DSM 43247] Length=373 Score = 206 bits (525), Expect = 4e-51, Method: Compositional matrix adjust. Identities = 126/314 (41%), Positives = 174/314 (56%), Gaps = 9/314 (2%) Query 36 DRRLWQRLCTELELPALHVPPEHGGLGATLVETAIAFAELGRALTPIP-FAATVFAIEAI 94 DR LW+ LCTE+ + AL +P E+GG GAT ETA ELG AL+P+P F + V A I Sbjct 48 DRDLWRTLCTEIGVAALPIPEEYGGAGATFAETAAVLEELGSALSPVPVFGSAVLATATI 107 Query 95 LRMGDDEQRKRLLAGLLTGARIGTIAVSGHDVASATTVRAVRRDGRPALTGECTPVLHGH 154 L D + +RLL L +G RI + + A+ VR D LTG V+ G Sbjct 108 LLADDADTSQRLLPHLASGERIAAVCWAD---ATGWERIGVRADA-GLLTGTAHYVVDGE 163 Query 155 VADLFVVPAVADGSIVLHVVAADAPGVTVTPLPSFDITRPVATLRLAGSPAEPLTAGTPD 214 AD +V A + + LH V A GV+VTPLP+ D TRP+ + +P+ + A P Sbjct 164 AADTLLVFASSGEQVTLHAVDTTADGVSVTPLPTMDPTRPLGAVHFDEAPSATIAA--PG 221 Query 215 DM-ERVLDVARVLLAAEMLGGAEACLDLAVQYAGRRTQFDRPIGSFQAVKHACADMMIEI 273 D+ R+ +A LL+AE +GGA+A LD V+Y R QF R IGSFQA+KH ADM +++ Sbjct 222 DLPHRLRTIAWALLSAEQVGGAQAALDRTVEYTKARKQFGRTIGSFQALKHRIADMYVQV 281 Query 274 DATRATVMFAAMSAANGD-ELQTVAPLAKAQTAETFVLCAGSALQIHGAIAFTWEHDLHL 332 + R+ A + GD +A A +E F G A+Q+HG I TWEHD+ L Sbjct 282 ETARSISRAAVDAVVTGDPAADELAVAAHVYCSEAFKSVTGEAIQLHGGIGITWEHDIQL 341 Query 333 YYRRAKTTEALFGS 346 Y++RA + L G+ Sbjct 342 YFKRAHGSAQLLGA 355 >gi|329897226|ref|ZP_08271965.1| Acyl-CoA dehydrogenase, short-chain specific [gamma proteobacterium IMCC3088] gi|328921288|gb|EGG28683.1| Acyl-CoA dehydrogenase, short-chain specific [gamma proteobacterium IMCC3088] Length=386 Score = 206 bits (524), Expect = 4e-51, Method: Compositional matrix adjust. Identities = 132/379 (35%), Positives = 202/379 (54%), Gaps = 23/379 (6%) Query 1 VDFRYSTEQDDFRASLRGFLGR--GAP-VREMAAAD-GSDRRLWQRLCTELELPALHVPP 56 ++F ++ EQ + FL AP VRE D G D ++W+RLC E+ A+ +P Sbjct 1 MEFAFTEEQIMIFDTADAFLSEVSTAPAVREAMQTDLGYDSKVWERLCQEMYWQAILIPE 60 Query 57 EHGGLGATLVETAIAFAELGRALTPIPFAATVFAIEAILRMGDDEQRKRLLAGLLTG--A 114 H GLG VE +G L PFA T I A+L+ G ++Q+ A L++G A Sbjct 61 AHDGLGLGFVELVGILERMGMRLFNAPFADTAAVITALLKWGSEDQQAEYFARLMSGESA 120 Query 115 RIGTIAVSGHDVASATTVRAVRRDGRPALTGECTPVLHGHVADLFVVPAVADGS-----I 169 + I + H +A T A D L+G V HGH AD+ +V A A GS + Sbjct 121 TVAVIDRARHWSTAAVTATASPIDSGYELSGTYRFVSHGHSADILLVAARAAGSEGSQGV 180 Query 170 VLHVVAADAPGVTVTPLPSFDITRPVATLRLAG-SPAEPLTAGTPDD----MERVLDVAR 224 L +V A A GV+ +P+ D TRP+A + L A + G P + + +++DV Sbjct 181 GLFLVDAKAEGVSRKRVPTMDQTRPLAEVTLDKVQVAANASLGCPGNAGQALTQLVDVLS 240 Query 225 VLLAAEMLGGAEACLDLAVQYAGRRTQFDRPIGSFQAVKHACADMMIEIDATRATVMFAA 284 + ++A+ LGGA+A LD+ V Y R QF R I SFQAVKH CADMM++++A+R+ V +AA Sbjct 241 IFVSADQLGGAQASLDMTVDYLQERVQFGRTIASFQAVKHKCADMMLKVEASRSIVYYAA 300 Query 285 MSA-------ANGDELQTVAPLAKAQTAETFVLCAGSALQIHGAIAFTWEHDLHLYYRRA 337 + + +L A + KA ++ F +G +Q+ G + T E+D+ LY++RA Sbjct 301 CAIDEWLQGRYDAAQLAEAASMTKAYCSDAFFFVSGCGIQLFGGVGITEEYDIQLYFKRA 360 Query 338 KTTEALFGSSARNRALLAE 356 K+TE G+ A +R +A+ Sbjct 361 KSTETFLGAGAEHRERIAQ 379 >gi|145220949|ref|YP_001131627.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium gilvum PYR-GCK] gi|315442081|ref|YP_004074960.1| acyl-CoA dehydrogenase [Mycobacterium sp. Spyr1] gi|145213435|gb|ABP42839.1| acyl-CoA dehydrogenase domain protein [Mycobacterium gilvum PYR-GCK] gi|315260384|gb|ADT97125.1| acyl-CoA dehydrogenase [Mycobacterium sp. Spyr1] Length=389 Score = 206 bits (523), Expect = 6e-51, Method: Compositional matrix adjust. Identities = 143/368 (39%), Positives = 203/368 (56%), Gaps = 18/368 (4%) Query 2 DFRYSTEQDDFRASLRGFLGRGAPVREMAAADGSD----RRLWQRLCTELELPALHVPPE 57 ++ +S EQ+ RA++R F + AA SD ++W RL +EL + + VP Sbjct 7 EWVFSDEQNQLRAAVRAFCADHVDESSVRAAMESDPPFDAKVWSRLGSELGVLGMAVPES 66 Query 58 HGGLGATLVETAIAFAELGRALTPIPFAATVF-AIEAILRMGDDEQRKRLLAGLLTGARI 116 GG G LV+ A+A +LG AL P TV+ AI A++ ++ LL L+ G R Sbjct 67 AGGAGGNLVDQAVAVEQLGAALACGPLFGTVYLAIPALVAASGGQE---LLGPLVDGTRT 123 Query 117 GTIAV---SGHDVASATTVRAVRRDGRPALTGECTPVLHGHVADLFVVPAVADGSIVLHV 173 AV +G AS+ V+AV + AL+G V+ AD+ +V A + L V Sbjct 124 AAFAVRDDAGAFDASSVEVQAVPTEQGWALSGTVERVVDAGAADVLLVAATTPDGVGLFV 183 Query 174 VAADAPGVTVTPLPSFDITRPVATLRLAGSPAEPLTAGTPDDMERV----LDVARVLLAA 229 V AD+ GV L + D+TRP AT+ L +PA+ L AG P++ ERV L V LLA Sbjct 184 VEADSLGVQRIRLTTLDLTRPQATVGLLDAPAQ-LIAG-PEEAERVITHALQVGAALLAV 241 Query 230 EMLGGAEACLDLAVQYAGRRTQFDRPIGSFQAVKHACADMMIEIDATRATVMFAAMSAAN 289 E +G A+ LDL+V YA R QF RPIGSFQAVKH AD ++ ++ R+T A + ++ Sbjct 242 EQVGAAQHLLDLSVDYAKNRLQFGRPIGSFQAVKHRLADDLVAVEHARSTAYHAVWALSD 301 Query 290 G-DELQTVAPLAKAQTAETFVLCAGSALQIHGAIAFTWEHDLHLYYRRAKTTEALFGSSA 348 G D+ +A+A T+ FV A +Q+HG I FTWEH HLYY+RA T AL G + Sbjct 302 GSDDPALAVSIAQATTSAAFVRVATDTIQVHGGIGFTWEHQAHLYYKRAYTDAALLGGAE 361 Query 349 RNRALLAE 356 +RA +A+ Sbjct 362 EHRARVAD 369 >gi|86748810|ref|YP_485306.1| Acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris HaA2] gi|86571838|gb|ABD06395.1| Acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris HaA2] Length=375 Score = 204 bits (519), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 135/371 (37%), Positives = 194/371 (53%), Gaps = 17/371 (4%) Query 1 VDFRYSTEQDDFRASLRGFLGRGAPVREM-AAADGS---DRRLWQRLCTELELPALHVPP 56 ++F +S +Q R R FL P + + A +G DR LW+ L E+ + +P Sbjct 1 MNFDFSDDQKQLRDQARRFLAEKCPPKAVRAVLEGKADYDRDLWKGL-AEMGFLGVAIPE 59 Query 57 EHGGLGATLVETAIAFAELGRALTPIPFAATVF-AIEAILRMGDDEQRKRLLAGLLTGAR 115 E+GG GA +E + ELGRAL P+PF++TV+ A E +L G +EQ+++ L + +G Sbjct 60 EYGGTGAGHLELCVIAEELGRALAPVPFSSTVYLAAEVLLLAGSEEQKQKWLPKISSGEA 119 Query 116 IGTIAV-SGHDVASATTVRAVRRDGRPALTGECTPVLHGHVADLFVVPAVADGS-----I 169 IGT+A+ G S ++ +G LTG PV G +AD +V A + S I Sbjct 120 IGTLALFEGTGNPSPQAIKVAAANG--TLTGTKKPVADGAIADFAIVAARSGNSGRETDI 177 Query 170 VLHVVAADAPGVTVTPLPSFDITRPVATLRLAGSPAEPLTAGTP--DDMERVLDVARVLL 227 L +V A GV PL + D +R A L AG+ AEPL A + RV+D A VL+ Sbjct 178 SLFLVDLKAGGVDAKPLQNVDPSRQQAELTFAGAKAEPLGAANEGWSILSRVMDRAAVLI 237 Query 228 AAEMLGGAEACLDLAVQYAGRRTQFDRPIGSFQAVKHACADMMIEIDATRATVMFAAMS- 286 A E +GGA+ L++ YA R F RPIGSFQAVKH ADM + R+ + A + Sbjct 238 AFEQVGGADRALEMGRDYALDRIAFGRPIGSFQAVKHILADMYVSATLARSNCYYGAWAL 297 Query 287 AANGDELQTVAPLAKAQTAETFVLCAGSALQIHGAIAFTWEHDLHLYYRRAKTTEALFGS 346 + + EL A A+ + F C+ +Q+HG + FTWE D HLYYRR+ GS Sbjct 298 STDAGELPEAAAAARISATQAFQHCSKQNIQVHGGMGFTWEFDCHLYYRRSNALALALGS 357 Query 347 SARNRALLAER 357 + L +R Sbjct 358 QSYWEDQLIDR 368 >gi|167624070|ref|YP_001674364.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella halifaxensis HAW-EB4] gi|167354092|gb|ABZ76705.1| acyl-CoA dehydrogenase domain protein [Shewanella halifaxensis HAW-EB4] Length=402 Score = 204 bits (518), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 132/394 (34%), Positives = 202/394 (52%), Gaps = 39/394 (9%) Query 1 VDFRYSTEQDDFRASLRGFLGRGAPVRE----MAAADGSDRRLWQRLCTELELPALHVPP 56 +DF ++ EQ+ R + FL + + M G D+ LW+++C E+ + VP Sbjct 1 MDFTFTEEQEMIRDTAVSFLADISASNQVRLVMETQTGYDKTLWKKVCEEMFWQGVTVPE 60 Query 57 EHGGLGATLVETAIAFAELGRALTPIPFAATVFAIEAILRM-GDDEQRKRLLAGLLTGAR 115 +GGLG VE ++G L PF +T+ L + G+++Q+KR +L GA Sbjct 61 AYGGLGLGYVELVALLEKMGERLFCSPFYSTIALAANALLIAGNEQQKKRYFEIILAGA- 119 Query 116 IGTIAVSGHD---VASATTVRAVRRDGRPALTGECTPVLHGHVADLFVVPAVADGS---- 168 T+A +G + A A V+ +G+ L G V+ GH A+ +V A + GS Sbjct 120 TATVAYTGANGRWDAKAVEALCVKENGQYKLNGCYRYVVDGHSANFLIVAARSLGSVGEE 179 Query 169 -IVLHVVAADAPGVTVTPLPSFDITRPVATLRLAGSPAEPLT-----AGTPDDMERVLDV 222 I L VV A+A GV LP+ D TR A + EP ++ V+D+ Sbjct 180 GISLFVVDANAEGVQRNWLPTMDQTRKQAEVVFENVIVEPCALLGEFEQGWQNLSIVIDL 239 Query 223 ARVLLAAEMLGGAEACLDLAVQYAGRRTQFDRPIGSFQAVKHACADMMIEIDATRATVMF 282 A + +AA+ +GGA+A LD +V Y +R QF R I SFQA+KH ADMM++ +A R+++ + Sbjct 240 ATIAIAADQVGGAQAALDQSVDYTKQRVQFGRTIASFQAIKHKAADMMLKAEAARSSIYY 299 Query 283 AAMSA-----ANGD---------------ELQTVAPLAKAQTAETFVLCAGSALQIHGAI 322 AA A NG EL VA +AKA ++ + AG +Q+HG + Sbjct 300 AACVADQFLNYNGQDVDGMPTQTINPLRKELSEVASIAKAYCSDAYFFNAGCGIQLHGGV 359 Query 323 AFTWEHDLHLYYRRAKTTEALFGSSARNRALLAE 356 FT E+D+ LY++RAK+TE G+SA +R LA Sbjct 360 GFTQEYDIQLYFKRAKSTETYLGNSAYHRERLAN 393 >gi|118470069|ref|YP_890797.1| acyl-CoA dehydrogenase [Mycobacterium smegmatis str. MC2 155] gi|118171356|gb|ABK72252.1| acyl-CoA dehydrogenase [Mycobacterium smegmatis str. MC2 155] Length=423 Score = 203 bits (517), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 140/365 (39%), Positives = 191/365 (53%), Gaps = 14/365 (3%) Query 2 DFRYSTEQDDFRASLRGF----LGRGAPVREMAAADGSDRRLWQRLCTELELPALHVPPE 57 +FR++ EQ RA++R F R M + D +W RL EL + L VP Sbjct 39 EFRFTDEQGQLRAAVRKFGAEYFDEQTVRRLMESEPRFDPAVWARLGAELGVLGLAVPEA 98 Query 58 HGGLGATLVETAIAFAELGRALTPIPFAATVF-AIEAILRMGDDEQRKRLLAGLLTGARI 116 GG G TLV+ A+A ELG AL P TV+ +I A++ R LL L+ GAR Sbjct 99 DGGAGGTLVDQAVAVEELGAALACGPLIGTVYLSIPALVAASAGPVRDELLGALVEGART 158 Query 117 GTIAVSGHDVASATTVRAVRRDGRPALTGECTPVLHGHVADLFVVPAVADGSIVLHVVAA 176 AV A + V LTG ++ G AD+F+V A A + L+ V Sbjct 159 AAFAVPDRAGAFDPALVGVTASADATLTGTVERIVDGAAADVFLVAATAPDGVALYAV-- 216 Query 177 DAPGVTVTPLPSFDITRPVATLRLAGSPAEPLTAGTPDDMERV----LDVARVLLAAEML 232 DA V TPL + D+TRP AT+ L +P L +G P + ERV L V LLA E + Sbjct 217 DASDVQRTPLTTLDLTRPQATIALTDTPGR-LVSG-PGEAERVIGHALQVGAALLAVEQV 274 Query 233 GGAEACLDLAVQYAGRRTQFDRPIGSFQAVKHACADMMIEIDATRATVMFAAMSAANG-D 291 G A+ LDL+V YA R QF RPIGSFQAVKH AD +++++ R+ A + A+G D Sbjct 275 GAAQHLLDLSVDYAKSRLQFGRPIGSFQAVKHRLADDLVDLEHARSAAYHAVWALADGSD 334 Query 292 ELQTVAPLAKAQTAETFVLCAGSALQIHGAIAFTWEHDLHLYYRRAKTTEALFGSSARNR 351 + A +A+A + A +Q+HG I FTWEH HLY++RA T AL G++ +R Sbjct 335 DPALAASIAQATASAALTKIATDTIQVHGGIGFTWEHQAHLYFKRATTDAALLGTAEAHR 394 Query 352 ALLAE 356 +AE Sbjct 395 DRIAE 399 >gi|288916035|ref|ZP_06410417.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EUN1f] gi|288352664|gb|EFC86859.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EUN1f] Length=390 Score = 202 bits (515), Expect = 6e-50, Method: Compositional matrix adjust. Identities = 136/378 (36%), Positives = 193/378 (52%), Gaps = 24/378 (6%) Query 1 VDFRYSTEQDDFRASLRGFLGRGAPVRE----MAAADGSDRRLWQRLCTELELPALHVPP 56 ++ +S EQ++ R ++R FL + +P E M A+G D +W +L EL + L VP Sbjct 1 MNLAFSDEQNELRRTVRDFLEKNSPETEVRRLMETAEGYDPDVWHQLAAELGIAGLAVPE 60 Query 57 EHGGLGATLVETAIAFAELGRALTPIPFAATV-FAIEAILRMGDDEQRKRLLAGLLTGAR 115 E+GG G VE I E GRAL P +TV A +L +GD+ L G+ G Sbjct 61 EYGGAGCGFVELGIVLEEAGRALLCAPLLSTVVLAASTLLELGDEGACADYLPGIADGTT 120 Query 116 IGTIAVSGHDVASATTVRAVRRDGRPA-------------LTGECTPVLHGHVADLFVVP 162 + T+A++ AV P+ ++G + V G A L +V Sbjct 121 LATLALT-ESTGRWNDPDAVTCTASPSGGTGGGADTGGWTVSGRKSFVPDGQTAALLLVV 179 Query 163 AVADGSIVLHVVAADAPGVTVTPLPSFDITRPVATLRLAGSPAEPLT---AGTPDDMERV 219 A D + + VA D P V P + D TR A L +PA L A P +ERV Sbjct 180 ARTDAGLSVFAVAGDVPQVRREPRATLDQTRRQADLTFTAAPARLLGTDGAAWPA-LERV 238 Query 220 LDVARVLLAAEMLGGAEACLDLAVQYAGRRTQFDRPIGSFQAVKHACADMMIEIDATRAT 279 LD+A + +AAE +G A LD+AV YA R QF RPIG+FQA+KH AD+ + +++ R+ Sbjct 239 LDLAAIAVAAEQVGAASRVLDMAVDYAKTRVQFGRPIGAFQAIKHKLADLHLAVESARSA 298 Query 280 VMFAAMSAANGD-ELQTVAPLAKAQTAETFVLCAGSALQIHGAIAFTWEHDLHLYYRRAK 338 +AA EL A LAKA + FV A +Q+HG I FTWEH HLY +RA Sbjct 299 AYHGLWAAAESPLELPAAASLAKACCGDAFVTAATENIQVHGGIGFTWEHPAHLYLKRAH 358 Query 339 TTEALFGSSARNRALLAE 356 ++ LFG++A +R LA+ Sbjct 359 SSRQLFGNAAHHRQRLAQ 376 >gi|345011678|ref|YP_004814032.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces violaceusniger Tu 4113] gi|344038027|gb|AEM83752.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces violaceusniger Tu 4113] Length=379 Score = 201 bits (511), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 144/367 (40%), Positives = 190/367 (52%), Gaps = 15/367 (4%) Query 2 DFRYSTEQDDFRASLRGFLG-RGAPVREMAAADGS---DRRLWQRLCTELELPALHVPPE 57 D YS +DD RA++R L R P ++ A+ D LW L E+ L VP + Sbjct 5 DLLYSEAEDDLRAAVRSLLADRCPPATVLSQAESGRAHDVALWGALGAEMGTAGLLVPDK 64 Query 58 HGGLGATLVETAIAFAELGRALTPIPF-AATVFAIEAILRMG-DDEQRKRLLAGLLTGAR 115 GG GAT E A+ ELGRA+ P+P+ + V A A+L D E RLL L G Sbjct 65 LGGQGATAREAAVVMEELGRAVAPVPYLTSAVLAASALLGCDTDQEPVARLLGALAEGRT 124 Query 116 IGTIAVSGHDVAS--ATTVRAVRRDGRPALTGECTPVLHGHVADLFVVPAVADGSIVLHV 173 +G +A+ VA T VR DG L+G+ + V AD+ +VPA L+ Sbjct 125 VGALALPLSTVAGVPGTPAATVRADGDGTLSGQVSGVAGAAGADVLLVPATGADGYGLYA 184 Query 174 VAADAPGVTVTPLPSFDITRPVATLRLAGSPAEPLTAGTPDD----MERVLDVARVLLAA 229 V VTV PL S D+TRP+A + L G+PA L P+ M R L LLA+ Sbjct 185 VGTAETSVTVEPLTSLDLTRPLAAVTLTGAPARKLAG--PERAAAAMGRALLTGAGLLAS 242 Query 230 EMLGGAEACLDLAVQYAGRRTQFDRPIGSFQAVKHACADMMIEIDATRATVMFAAMSAAN 289 E LG AE CL V++ R QF RPIGSFQA+KH A + +E+ + RAT +AA + A Sbjct 243 EQLGVAEWCLTETVRHTKERHQFGRPIGSFQALKHRMAALWLELVSARATARYAADALAT 302 Query 290 GDELQTVA-PLAKAQTAETFVLCAGSALQIHGAIAFTWEHDLHLYYRRAKTTEALFGSSA 348 VA +A+A AE V A +Q+HG I TWEH HLY +RAK+ E G+ Sbjct 303 DSPDTPVAVAVAQAHCAEVAVRAAEECVQLHGGIGMTWEHPAHLYLKRAKSDEIALGTPG 362 Query 349 RNRALLA 355 R+R LA Sbjct 363 RHRQALA 369 >gi|120401418|ref|YP_951247.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium vanbaalenii PYR-1] gi|119954236|gb|ABM11241.1| acyl-CoA dehydrogenase domain protein [Mycobacterium vanbaalenii PYR-1] Length=390 Score = 201 bits (510), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 147/368 (40%), Positives = 201/368 (55%), Gaps = 18/368 (4%) Query 2 DFRYSTEQDDFRASLRGF----LGRGAPVREMAAADGSDRRLWQRLCTELELPALHVPPE 57 ++ ++ EQ RA++R F + A +MA+ D ++W RL +EL + + VP Sbjct 8 EYVFTEEQGQLRAAVRRFCADHIDETAVRAQMASEPRFDPKVWARLGSELGVLGMSVPES 67 Query 58 HGGLGATLVETAIAFAELGRALTPIPFAATVF-AIEAILRMGDDEQRKRLLAGLLTGARI 116 HGG G TLV+ A+A +LG AL P TV+ AI A++ Q LLA L+ G R Sbjct 68 HGGAGGTLVDQAVAVEQLGAALACGPLFGTVYLAIPALVA---SSQPGDLLAPLIEGIRT 124 Query 117 GTIAV--SGHDV-ASATTVRAVRRDGRPALTGECTPVLHGHVADLFVVPAVADGSIVLHV 173 AV +G D A A TV A+ D LTG V+ AD+ +V A + L+ Sbjct 125 AAFAVPDAGGDFDADAVTVEAIPTDQGWTLTGTVQRVVDAGAADVVLVAAAGPDGLGLYA 184 Query 174 VAADAPGVTVTPLPSFDITRPVATLRLAGSPAEPLTAGTPDDMERV----LDVARVLLAA 229 + AD GV PL + D+TRP AT+ L +PA L AG P + ERV L + LLA Sbjct 185 IEADNIGVQRIPLTTLDLTRPQATVGLFHAPAR-LVAG-PAEAERVITHALQIGAALLAV 242 Query 230 EMLGGAEACLDLAVQYAGRRTQFDRPIGSFQAVKHACADMMIEIDATRATVMFAAMSAAN 289 E +G A+ LDL V YA R QF RPIGSFQAVKH AD ++ ++ R+T A + + Sbjct 243 EQVGAAQHLLDLTVDYAKNRLQFGRPIGSFQAVKHRLADDLVALEHARSTAYHAVWALTD 302 Query 290 G-DELQTVAPLAKAQTAETFVLCAGSALQIHGAIAFTWEHDLHLYYRRAKTTEALFGSSA 348 G D+ +A+A +E V A +Q+HG I FTWEH HLYY+RA T AL GS+ Sbjct 303 GSDDPALAVSIAQATCSEALVRVATDTIQVHGGIGFTWEHQAHLYYKRAYTDAALLGSAE 362 Query 349 RNRALLAE 356 +RA +AE Sbjct 363 AHRARVAE 370 >gi|254483137|ref|ZP_05096371.1| Acyl-CoA dehydrogenase, C-terminal domain protein [marine gamma proteobacterium HTCC2148] gi|214036659|gb|EEB77332.1| Acyl-CoA dehydrogenase, C-terminal domain protein [marine gamma proteobacterium HTCC2148] Length=390 Score = 196 bits (499), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 132/380 (35%), Positives = 201/380 (53%), Gaps = 25/380 (6%) Query 1 VDFRYSTEQDDFRASLRGFL----GRGAPVREMAAADGSDRRLWQRLCTELELPALHVPP 56 ++F ++ EQ+ R + FL G A + MA G D LWQR+C E+ A+H+P Sbjct 1 MEFAFTEEQEMIRDTAAAFLAEVSGSEAIRQVMATEQGYDPALWQRICGEMYWQAIHIPE 60 Query 57 EHGGLGATLVETAIAFAELGRALTPIPFAATV-FAIEAILRMGDDEQRKRLLAGLLTGAR 115 +GG+G VE ++G+ L PF +TV A A+L G +EQ+ L L Sbjct 61 AYGGMGLGYVEVVAMMEQMGKHLLCSPFFSTVCLASNALLVAGTEEQKSLWLGKLCESGL 120 Query 116 IGTIAVSGHDV---ASATTVRAVRRDGRPALTGECTPVLHGHVADLFVVPAVADGS---- 168 T+A +G A A T R L G V+ GH ++L +V A +GS Sbjct 121 TATVAFNGGSSSWNADAITATWKRSGDDFVLNGNYRYVVDGHTSELLIVAAREEGSTAED 180 Query 169 -IVLHVVAADAPGVTVTPLPSFDITRPVATLRLA----GSPAEPLTAG-TPDDMERVLDV 222 I L ++ A GVT LP+ D R A++ L+ G+ A AG + +VLD+ Sbjct 181 GISLFLLPAATAGVTSEWLPTMDQARKQASVDLSSVTVGAEALMGEAGRGWSQLAKVLDL 240 Query 223 ARVLLAAEMLGGAEACLDLAVQYAGRRTQFDRPIGSFQAVKHACADMMIEIDATRATVMF 282 A + LAAE +GG + LD+ V+Y R QF+R I SFQAVKH ADMM++ + R+ + + Sbjct 241 AAIALAAEQVGGCQQLLDMTVEYTSERVQFNRTIASFQAVKHKAADMMLQTEVARSGIYY 300 Query 283 AAMSAAN----GD---ELQTVAPLAKAQTAETFVLCAGSALQIHGAIAFTWEHDLHLYYR 335 AA A G+ EL A +AK+ ++ + AG ++Q+ G + FTWE+D+HLY++ Sbjct 301 AACVAQEALFGGELAVELPEAASIAKSYCSDAYFAIAGDSMQLFGGVGFTWEYDVHLYFK 360 Query 336 RAKTTEALFGSSARNRALLA 355 RAK++E + G + +R +A Sbjct 361 RAKSSEQMLGGGSVHRERIA 380 >gi|119504461|ref|ZP_01626540.1| acyl-CoA dehydrogenase-like protein [marine gamma proteobacterium HTCC2080] gi|119459483|gb|EAW40579.1| acyl-CoA dehydrogenase-like protein [marine gamma proteobacterium HTCC2080] Length=373 Score = 196 bits (499), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 134/356 (38%), Positives = 186/356 (53%), Gaps = 13/356 (3%) Query 1 VDFRYSTEQDDFRASLRGFLGRGAP-VREMAAADGS---DRRLWQRLCTELELPALHVPP 56 ++F +S EQ R RGFL + P R DG D LW + E+ A +P Sbjct 1 MNFEFSEEQLMLREQARGFLAQHCPPTRVRKVFDGEQDYDAALWTSIA-EMGWTATAIPE 59 Query 57 EHGGLGATLVETAIAFAELGRALTPIPFAATVF-AIEAILRMGDDEQRKRLLAGLLTGAR 115 +GGLG E AI ELGRA+ P+PF+++V+ A EAI+ G++ Q++R L GL +G Sbjct 60 AYGGLGLGYYELAIIAEELGRAVAPVPFSSSVYLATEAIMAFGNESQKERWLPGLASGEC 119 Query 116 IGTIA-VSGHDVASATTVRAVRRDGRPALTGECTPVLHGHVADLFVVPAVA-DGSIVLHV 173 I T+A G +A ++ A DG ALTG PV G A++ +V A DGS+ L + Sbjct 120 IATLAHAEGAGQTTAKSLSAALSDG--ALTGVKKPVADGINANIAIVTTAAEDGSVTLCL 177 Query 174 VAADAPGVTVTPLPSFDITRPVATLRLAGSPAEPLTAGT--PDDMERVLDVARVLLAAEM 231 V + V +P+ + D +R ATL + AE L GT E +LD A VL+A E Sbjct 178 VELNQDNVERSPIQTLDFSRGHATLTFNNASAEALGDGTVTWSAFEALLDRAAVLMAWEQ 237 Query 232 LGGAEACLDLAVQYAGRRTQFDRPIGSFQAVKHACADMMIEIDATRATVMFAAMS-AANG 290 LG A+ L+ A YA +R F R IGSFQA+KH A M ++ R+ A + A+N Sbjct 238 LGLADKALEQACDYAQQRYAFGRAIGSFQAIKHKLAGMYVKNALARSNAYHGAWALASNS 297 Query 291 DELQTVAPLAKAQTAETFVLCAGSALQIHGAIAFTWEHDLHLYYRRAKTTEALFGS 346 D L A A+ + + + A +Q HG + FTWE D YYRRAK GS Sbjct 298 DTLPLAASTARVASIQASLNAAQENIQTHGGMGFTWEFDCQFYYRRAKLLSLAIGS 353 >gi|108802152|ref|YP_642349.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS] gi|119871305|ref|YP_941257.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp. KMS] gi|108772571|gb|ABG11293.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS] gi|119697394|gb|ABL94467.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. KMS] Length=385 Score = 195 bits (496), Expect = 8e-48, Method: Compositional matrix adjust. Identities = 140/364 (39%), Positives = 192/364 (53%), Gaps = 13/364 (3%) Query 3 FRYSTEQDDFRASLRGFLGRG---APVREMAAAD-GSDRRLWQRLCTELELPALHVPPEH 58 F ++ EQ R ++RGF VR + +D D LW RL +EL + L V Sbjct 5 FVFTEEQRQLRDAVRGFCSDHFDEQTVRRIMESDPAHDPALWARLGSELGVLGLSVSEAD 64 Query 59 GGLGATLVETAIAFAELGRALTPIPFAATVF-AIEAILRMGDDEQRKRLLAGLLTGARIG 117 GG G LV+ A+A E G +L P TV+ AI A++ R RLLA L+ G R Sbjct 65 GGAGGDLVDQAVAVEEFGASLVCGPLFGTVYLAIPALVAASAGPARDRLLADLVEGTRTA 124 Query 118 TIAVSGHDVASATTVRAVRRDGRPALTGECTPVLHGHVADLFVVPAVADGSIVLHVVAAD 177 AV+ A V +G ALTG V+ G VAD+ +V A + L+ V Sbjct 125 AFAVADRAGAFVPDAVGVTVEG-DALTGTLAQVVDGAVADVLLVAAKGSDGVGLYAVDTG 183 Query 178 APGVTVTPLPSFDITRPVATLRLAGSPAEPLTAGTPDDMERV----LDVARVLLAAEMLG 233 A G+ TPL + D+TR A+ L+G+PA L AG PD+ RV L V LLA E +G Sbjct 184 AEGLERTPLVTLDLTRTQASFTLSGAPA-TLIAG-PDEAARVIQHALHVGSALLAVEQVG 241 Query 234 GAEACLDLAVQYAGRRTQFDRPIGSFQAVKHACADMMIEIDATRATVMFAAMSAANG-DE 292 A+ LD+AV+YA R QF RPIGSFQAVKH ADM+++ + R+T A + NG D+ Sbjct 242 AAQHLLDIAVEYAKSRLQFGRPIGSFQAVKHRLADMLVDAEHARSTAYHAVWALTNGSDD 301 Query 293 LQTVAPLAKAQTAETFVLCAGSALQIHGAIAFTWEHDLHLYYRRAKTTEALFGSSARNRA 352 +A+A + A +Q+ G I FTWEH HLY++RA T L G++ +RA Sbjct 302 AALATAIAQAVCSAALSRIAADTIQVLGGIGFTWEHQAHLYFKRATTDATLLGTAEEHRA 361 Query 353 LLAE 356 +A+ Sbjct 362 RVAD 365 >gi|324999964|ref|ZP_08121076.1| acyl-CoA dehydrogenase [Pseudonocardia sp. P1] Length=365 Score = 195 bits (496), Expect = 9e-48, Method: Compositional matrix adjust. Identities = 140/362 (39%), Positives = 200/362 (56%), Gaps = 17/362 (4%) Query 2 DFRYSTEQDDFRASLRGFLGR---GAPVREMAAADGS-DRRLWQRLCTELELPALHVPPE 57 D YS +DD RA++R L + + V E +D DR LW L T++ +L +P Sbjct 4 DLLYSEIEDDLRATVRSVLDKRSAWSDVLERTESDTPVDRELWLALGTDVGCSSLAIPER 63 Query 58 HGGLGATLVETAIAFAELGRALTPIPFAATVFAIEAILRMGDDEQRKRLLAGLLTGARIG 117 GG GA+ E+A+ ELGRA+ P+PF T A +L +G++E ++ +G L A Sbjct 64 FGGAGASWRESAVVSEELGRAVAPVPFLGTAVAGALLLELGEEELLPQIASGELGAA--- 120 Query 118 TIAVSGHDVASATTVRAVRRDGRPALTGECTPVLHGHVADLFVVPAVADGSIVLHVVAAD 177 +AV A + V V DGR L G V VAD+ +VP V D L+ V ++ Sbjct 121 -VAVPFGATAGVSGV-PVTVDGR-TLYGSVRGVADALVADVLLVP-VGDA---LYAVGSE 173 Query 178 APGVTVTPLPSFDITRPVATLRLAGSPAEPLTAG--TPDDMERVLDVARVLLAAEMLGGA 235 + G+ TP+ S D+TRP+ L G A P+ G P ++ L + VLLA+E LG A Sbjct 174 SEGLVRTPVVSLDMTRPLVDLSFDGVSARPVARGPNVPAAVDAALRIGAVLLASEQLGVA 233 Query 236 EACLDLAVQYAGRRTQFDRPIGSFQAVKHACADMMIEIDATRATVMFAAMSAANGD-ELQ 294 E CLD+ V+Y G R+QF R +GS+QA+KH AD+ + I RA +AA AA G +L Sbjct 234 ERCLDMTVEYLGVRSQFARVLGSYQALKHRLADLWVLITQARAVARYAAECAAVGSPDLP 293 Query 295 TVAPLAKAQTAETFVLCAGSALQIHGAIAFTWEHDLHLYYRRAKTTEALFGSSARNRALL 354 A LA+A + A +Q+HG I FTWEH HLY +RAK++ FG+ R+RA+L Sbjct 294 VAAALAQAHCSVVVQQAAEECVQLHGGIGFTWEHPAHLYLKRAKSSAIAFGTPERHRAVL 353 Query 355 AE 356 A+ Sbjct 354 AD 355 >gi|334144984|ref|YP_004538193.1| acyl-CoA dehydrogenase domain-containing protein [Novosphingobium sp. PP1Y] gi|333936867|emb|CCA90226.1| acyl-CoA dehydrogenase domain-containing protein [Novosphingobium sp. PP1Y] Length=352 Score = 195 bits (496), Expect = 9e-48, Method: Compositional matrix adjust. Identities = 136/360 (38%), Positives = 189/360 (53%), Gaps = 21/360 (5%) Query 1 VDFRYSTEQDDFRASLRGFLGRGAP---VREMAAADGSDRRLWQRLCTELELPALHVPPE 57 ++F ++ EQ + R + A RE A DG DR LWQ C EL + +P + Sbjct 1 MEFAFTDEQHMIAETARAYFVENATSARTREAMAGDGIDRALWQGYCQELGFSGIAIPED 60 Query 58 HGGLGATLVETAIAFAELGRALTPIPFAATVFAIEAILRMGDDE-QRKRLLAGLLTGARI 116 GG G LVE AI G + +P +V + G E QR +AGLL+G Sbjct 61 RGGSGLGLVELAIIAEAAGSQVAALPMLGSVVQAAQAIAAGGSEAQRSAWIAGLLSGE-- 118 Query 117 GTIAVSGHDVASATTVRAVRRDGRPALTGECTPVLHGHVADLFVVPAVADGSIVLHVVAA 176 TIA D + +GR LTG V HG A++ VV ++G +V A Sbjct 119 -TIAAFVEDAGLKES------EGR--LTGTSRFVTHGGSAEVLVV---SNGRRAW-IVRA 165 Query 177 DAPGVTVTPLPSFDITRPVATLRLAGSPAEPLTAGTPDDMERVLDVARVLLAAEMLGGAE 236 D PGV+V S D TRP+A++RL G+ +PL + + V +AAE LGGA+ Sbjct 166 DTPGVSVDVPTSMDQTRPLASVRLDGAVGDPLAD-PAAALASSYRASLVAVAAEALGGAQ 224 Query 237 ACLDLAVQYAGRRTQFDRPIGSFQAVKHACADMMIEIDATRATVMFAAMSAANGD-ELQT 295 CLD V Y+ R QF RPIGSFQA KH ADMMIEI+ R+ V +AA + G + + Sbjct 225 ECLDRTVAYSKERVQFGRPIGSFQAYKHRLADMMIEIEQARSAVYWAACAVDEGSPDAEL 284 Query 296 VAPLAKAQTAETFVLCAGSALQIHGAIAFTWEHDLHLYYRRAKTTEALFGSSARNRALLA 355 AKA +TF CAG +Q+HG I FTWEHD HL+++RA++ +++ G+ +R +A Sbjct 285 SLHAAKAFCTDTFFRCAGDMIQLHGGIGFTWEHDAHLFFKRARSLQSMLGNGNWHRERIA 344 >gi|312138164|ref|YP_004005500.1| acyl-CoA dehydrogenase [Rhodococcus equi 103S] gi|311887503|emb|CBH46815.1| putative acyl-CoA dehydrogenase [Rhodococcus equi 103S] Length=373 Score = 195 bits (495), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 138/362 (39%), Positives = 194/362 (54%), Gaps = 26/362 (7%) Query 5 YSTEQDDFRASLRGFLGRGAPV----REMAAADGSDRRLWQRLCTELELPALHVPPEHGG 60 ++ EQ + R ++ L + A + + + + DR LW LC ++ + AL +P E GG Sbjct 2 FAEEQIELRKTVAQLLAKRADAAALRKTLESGEAFDRGLWDVLCQQVGVAALAIPEEFGG 61 Query 61 LGATLVETAIAFAELGRALTPIP-FAATVFAIEAILRMGDDEQRKRLLAGLLTGARIGTI 119 GATLVE + ELG ALTP P F + V A +AIL G+DE +RLL G+ G+ I + Sbjct 62 FGATLVEQHLVLEELGAALTPSPMFGSAVLAAQAILATGNDEACERLLPGIAEGSSIAAL 121 Query 120 AV---SGH----DVASATTVRAVRRDGRPALTGECTPVLHGHVADLFVVPAVADGS---I 169 GH DVA T DG ++G VL G AD+ +V A +GS I Sbjct 122 CWVGPEGHWRSDDVA--CTAAGSDADGY-TVSGTAHYVLDGAHADVLIVAAAVEGSDGVI 178 Query 170 VLHVVAADAPGVTVTPLPSFDITRPVATLRLAGSPAEPLTAGTPDD----MERVLDVARV 225 L V A GV LP+ D+TRP++ + +PA LTA DD +E+V +A V Sbjct 179 GLFEVDPAAGGVARRQLPTMDLTRPMSLVEFDSAPAVRLTA---DDATAALEKVRTIAIV 235 Query 226 LLAAEMLGGAEACLDLAVQYAGRRTQFDRPIGSFQAVKHACADMMIEIDATRATVMFAAM 285 L+AE +G AE C+ + V Y+ R QF R IGSFQA+KH AD+ ++ R+ A Sbjct 236 ALSAEQVGAAERCMQMTVDYSKDRVQFGRAIGSFQALKHRMADLYFLVETARSASYAAVH 295 Query 286 SAANG-DELQTVAPLAKAQTAETFVLCAGSALQIHGAIAFTWEHDLHLYYRRAKTTEALF 344 S + G A +AKA +E F+ G A+Q+HG IA TWEHD HL+++RA + L Sbjct 296 SLSEGLPTAAADALVAKAYCSEAFLAVTGDAIQLHGGIAITWEHDAHLFFKRAHGSAQLL 355 Query 345 GS 346 G Sbjct 356 GQ 357 >gi|72162709|ref|YP_290366.1| acyl-CoA dehydrogenase [Thermobifida fusca YX] gi|71916441|gb|AAZ56343.1| putative acyl-CoA dehydrogenase [Thermobifida fusca YX] Length=377 Score = 195 bits (495), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 146/372 (40%), Positives = 200/372 (54%), Gaps = 16/372 (4%) Query 1 VDFRYSTEQDDFRASLRGFLGRGAP-------VREMAAADGSDRRLWQRLCTELELPALH 53 ++ YS + + RAS+R L P V A A+ +DR LWQ L EL++ L Sbjct 6 LNLLYSEIEQELRASVRELLAHRCPWQSVLDRVSHHAPAEVTDRALWQELA-ELDVLGLF 64 Query 54 VPPEHGGLGATLVETAIAFAELGRALTPIPF-AATVFAIEAILRMGD-DEQRKRLLAGLL 111 VP GG GAT E + ELGRA+ P+PF + V A A++ +G +EQ + LL L Sbjct 65 VPETLGGAGATAREASSVAEELGRAVAPVPFLGSAVLATGALVALGTAEEQVRALLTDLA 124 Query 112 TGARIGTIAVSGHDVASATTVRAVRRDGRPALTGECTPVLHGHVADLFVVPAVADGSIVL 171 G R T+ V + VR DG LTG V+ AD+ VVPA+ L Sbjct 125 AGQRCATLVVPLPTAPGSGFPSQVRADGS-QLTGTVPGVVDALSADVLVVPALGAEGPGL 183 Query 172 HVVAADAPGVTVTPLPSFDITRPVATLRLAGSPAEPLTAGTP--DDMERVLDVARVLLAA 229 +++ AD T++P+ S D TRP+A + L G+ A + G D +E L VLLAA Sbjct 184 YLLPADQ--ATLSPVVSLDQTRPLAEVTLTGAEATRVAVGQQAVDAVEAALLTGAVLLAA 241 Query 230 EMLGGAEACLDLAVQYAGRRTQFDRPIGSFQAVKHACADMMIEIDATRATVMFAAMS-AA 288 E LG AE D V Y R QF RPIGSFQA+KH AD+ + + RA V AA + AA Sbjct 242 EQLGTAEWAFDTTVAYLKERVQFARPIGSFQALKHRVADLWVLLAQARAVVRHAASALAA 301 Query 289 NGDELQTVAPLAKAQTAETFVLCAGSALQIHGAIAFTWEHDLHLYYRRAKTTEALFGSSA 348 + ++L A LA+A +E V A+Q+HG I FTWEH +HLY +RAK+ G++ Sbjct 302 DSEDLPLAAALAQAFVSEVAVKVTEEAVQLHGGIGFTWEHPVHLYLKRAKSASLSLGTAD 361 Query 349 RNRALLAERAGL 360 R+RA +A+ GL Sbjct 362 RHRARIADLVGL 373 >gi|146338041|ref|YP_001203089.1| putative acyl-CoA dehydrogenase [Bradyrhizobium sp. ORS 278] gi|146190847|emb|CAL74852.1| putative acyl-CoA dehydrogenase [Bradyrhizobium sp. ORS 278] Length=375 Score = 195 bits (495), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 130/362 (36%), Positives = 182/362 (51%), Gaps = 21/362 (5%) Query 1 VDFRYSTEQDDFRASLRGFLGRGAPVREM-AAADGS---DRRLWQRLCTELELPALHVPP 56 ++F +S +Q R R FL P + + DG DR LW+ E+ + +P Sbjct 1 MNFDFSDDQKQLRDQARKFLAEKCPPKAVRVVLDGKEPYDRALWKGFA-EMGFLGVAIPE 59 Query 57 EHGGLGATLVETAIAFAELGRALTPIPFAATVF-AIEAILRMGDDEQRKRLLAGLLTGAR 115 E+GG GA +E + E+GRAL P+PF++TV+ A EA++ G D Q++ L + G Sbjct 60 EYGGAGAGHLELCVLAEEVGRALAPVPFSSTVYLAAEALMLAGSDAQKQAWLPKIANGET 119 Query 116 IGTIAV---SGHDVASATTVRAVRRDGRPALTGECTPVLHGHVADLFVVPAVA-----DG 167 IGT+A+ +G+ A + A G L G PV G +ADL +V A D Sbjct 120 IGTLALFEGTGNPSPKAIKLEA----GNGLLNGTKKPVADGAIADLIIVAARTASTGRDS 175 Query 168 SIVLHVVAADAPGVTVTPLPSFDITRPVATLRLAGSPAEPLTAGTP--DDMERVLDVARV 225 I L +V A GV L + D TR A L A AEPL A + +VLD A V Sbjct 176 DISLFLVDTKAGGVEAKALTNLDPTRGQAELTFANCKAEPLGAAGEGWSILTQVLDRAAV 235 Query 226 LLAAEMLGGAEACLDLAVQYAGRRTQFDRPIGSFQAVKHACADMMIEIDATRATVMFAAM 285 L A E +GG++ L++ YA R F RPIGSFQAVKH ADM + R+ + A Sbjct 236 LTAFEQVGGSDRALEMGRDYALDRIAFGRPIGSFQAVKHMLADMYVSATLARSNAYYGAW 295 Query 286 S-AANGDELQTVAPLAKAQTAETFVLCAGSALQIHGAIAFTWEHDLHLYYRRAKTTEALF 344 + + N EL A A+ + + C + +Q+HG + FTWE D H+YYRRA Sbjct 296 ALSTNAPELPEAAASARISATQAYQHCGKNNIQVHGGMGFTWEFDCHMYYRRANALALGL 355 Query 345 GS 346 GS Sbjct 356 GS 357 >gi|325674932|ref|ZP_08154619.1| acyl-CoA dehydrogenase [Rhodococcus equi ATCC 33707] gi|325554518|gb|EGD24193.1| acyl-CoA dehydrogenase [Rhodococcus equi ATCC 33707] Length=393 Score = 194 bits (494), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 138/362 (39%), Positives = 194/362 (54%), Gaps = 26/362 (7%) Query 5 YSTEQDDFRASLRGFLGRGAPV----REMAAADGSDRRLWQRLCTELELPALHVPPEHGG 60 ++ EQ + R ++ L + A + + + + DR LW LC ++ + AL +P E GG Sbjct 22 FAEEQIELRKTVAQLLAKRADAAALRKTLESGEAFDRGLWDVLCQQVGVAALAIPEEFGG 81 Query 61 LGATLVETAIAFAELGRALTPIP-FAATVFAIEAILRMGDDEQRKRLLAGLLTGARIGT- 118 GATLVE + ELG ALTP P F + V A +AIL G+DE +RLL G+ G+ I Sbjct 82 FGATLVEQHLVLEELGAALTPSPMFGSAVLAAQAILATGNDEACERLLPGIAEGSSIAAL 141 Query 119 --IAVSGH----DVASATTVRAVRRDGRPALTGECTPVLHGHVADLFVVPAVADGS---I 169 + GH DVA T DG ++G VL G AD+ +V A +GS I Sbjct 142 CWVGPEGHWRSDDVA--CTAAGSDADGY-TVSGTAHYVLDGAHADVLIVAAAVEGSDGVI 198 Query 170 VLHVVAADAPGVTVTPLPSFDITRPVATLRLAGSPAEPLTAGTPDD----MERVLDVARV 225 L V A GV LP+ D+TRP++ + +PA LTA DD +E+V +A V Sbjct 199 GLFEVDPAAGGVARRQLPTMDLTRPMSLVEFDSAPAVRLTA---DDATAALEKVRTIAIV 255 Query 226 LLAAEMLGGAEACLDLAVQYAGRRTQFDRPIGSFQAVKHACADMMIEIDATRATVMFAAM 285 L+AE +G AE C+ + V Y+ R QF R IGSFQA+KH AD+ ++ R+ A Sbjct 256 ALSAEQVGAAERCMQMTVDYSKDRVQFGRAIGSFQALKHRMADLYFLVETARSASYAAVH 315 Query 286 SAANG-DELQTVAPLAKAQTAETFVLCAGSALQIHGAIAFTWEHDLHLYYRRAKTTEALF 344 S + G A +AKA +E F+ G A+Q+HG IA TWEHD HL+++RA + L Sbjct 316 SLSEGLPTAAADALVAKAYCSEAFLAVTGDAIQLHGGIAITWEHDAHLFFKRAHGSAQLL 375 Query 345 GS 346 G Sbjct 376 GQ 377 >gi|134101885|ref|YP_001107546.1| putative acyl-CoA dehydrogenase [Saccharopolyspora erythraea NRRL 2338] gi|291008585|ref|ZP_06566558.1| putative acyl-CoA dehydrogenase [Saccharopolyspora erythraea NRRL 2338] gi|133914508|emb|CAM04621.1| putative acyl-CoA dehydrogenase [Saccharopolyspora erythraea NRRL 2338] Length=369 Score = 194 bits (494), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 143/364 (40%), Positives = 192/364 (53%), Gaps = 6/364 (1%) Query 2 DFRYSTEQDDFRASLRGFLGRGAPVREMAAADGSDR----RLWQRLCTELELPALHVPPE 57 D YS +DD RA +R L + A SD+ LW+ L L L AL VP E Sbjct 5 DLLYSEVEDDLRAGVRRLLRDRCDWTSVLARCESDQPYDLELWRTLAGGLGLAALLVPEE 64 Query 58 HGGLGATLVETAIAFAELGRALTPIPFAATVFAIEAILRMGDDEQRKRLLAGLLTGARIG 117 GG GA+ E + ELGRA+ P+PF + A A+ D E + LL L G+ +G Sbjct 65 LGGAGASARELGVVAEELGRAVAPVPFLGNLLATTALTGCADAEGVRELLPRLSDGSLVG 124 Query 118 TIAVSGHDVASATTVRAVRRDGRPALTGECTPVLHGHVADLFVVPAVADGSIVLHVVAAD 177 T+AV A AV+ +G LTG T V+ VAD +VPA + L++V Sbjct 125 TVAVPLTTAPHAPFPSAVKAEG-ATLTGTVTSVVDLEVADRVLVPATDEDGPALYLVDTS 183 Query 178 APGVTVTPLPSFDITRPVATLRLAGSPAEPLTAGTPDDMERVLDVARVLLAAEMLGGAEA 237 A GVT TP D+TR + TL L+ A+ + + R L VA LA+E G A+ Sbjct 184 AAGVTTTPATPLDLTRRIGTLDLSAVAAQRVGGDAARVLRRALTVAAGTLASEQTGLAQL 243 Query 238 CLDLAVQYAGRRTQFDRPIGSFQAVKHACADMMIEIDATRATVMFAAMS-AANGDELQTV 296 CLD V+YA R QF R IGSFQAVKH AD+ + RA AA + +G+E + Sbjct 244 CLDSTVEYALTRYQFGRQIGSFQAVKHRLADLWSGVSTARAAARGAADALTGSGEETELA 303 Query 297 APLAKAQTAETFVLCAGSALQIHGAIAFTWEHDLHLYYRRAKTTEALFGSSARNRALLAE 356 +A+A ++ VL A ALQ+HG I TWEH +HLY RAK+++ FG + R+RA +AE Sbjct 304 VAVAQAYCSDLVVLAAEEALQLHGGIGMTWEHPVHLYLGRAKSSQLAFGIAERHRARIAE 363 Query 357 RAGL 360 GL Sbjct 364 LVGL 367 >gi|148258321|ref|YP_001242906.1| putative acyl-CoA dehydrogenase [Bradyrhizobium sp. BTAi1] gi|146410494|gb|ABQ39000.1| putative acyl-CoA dehydrogenase [Bradyrhizobium sp. BTAi1] Length=375 Score = 194 bits (493), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 132/373 (36%), Positives = 189/373 (51%), Gaps = 21/373 (5%) Query 1 VDFRYSTEQDDFRASLRGFLGRGAPVREM-AAADGS---DRRLWQRLCTELELPALHVPP 56 ++F +S +Q R R FL P + + DG DR LW+ E+ + +P Sbjct 1 MNFDFSDDQKQLRDQARKFLAEKCPPKAVRVVLDGQAPYDRALWKGFA-EMGFLGVAIPE 59 Query 57 EHGGLGATLVETAIAFAELGRALTPIPFAATVF-AIEAILRMGDDEQRKRLLAGLLTGAR 115 E+GG GA +E + E+GRAL P+PF++TV+ A E ++ G D Q++ L + +G Sbjct 60 EYGGAGAGHLELCVIAEEVGRALAPVPFSSTVYLAAEVLMLAGSDAQKQAWLPKIASGEA 119 Query 116 IGTIAVSGHDVASATTVRAVRRDG-RPALTGECTPVLHGHVADLFVVPAVA-----DGSI 169 IGT A+ + + +A+R D L G TPV G +ADL +V A D I Sbjct 120 IGTFAL--FEGTGNPSPKAIRLDAANGVLNGVKTPVADGAIADLIIVAARTASTGRDSDI 177 Query 170 VLHVVAADAPGVTVTPLPSFDITRPVATLRLAGSPAEPLTAGTPDD----MERVLDVARV 225 L +V A A GV L + D TR A L AEPL G P + + +VLD A V Sbjct 178 SLFLVDAKAGGVDAKALTNLDPTRGQAELTFKTCKAEPL--GAPGEGWSIITQVLDRAAV 235 Query 226 LLAAEMLGGAEACLDLAVQYAGRRTQFDRPIGSFQAVKHACADMMIEIDATRATVMFAAM 285 L A E +GG++ L++ YA R F RPIGSFQAVKH ADM + R+ + A Sbjct 236 LTAFEQVGGSDRALEMGRDYALDRIAFGRPIGSFQAVKHMLADMYVSATLARSNAYYGAW 295 Query 286 S-AANGDELQTVAPLAKAQTAETFVLCAGSALQIHGAIAFTWEHDLHLYYRRAKTTEALF 344 + + N EL A ++ + + CA + +Q+HG + FTWE D H+YYRRA Sbjct 296 ALSTNAPELPEAAASSRISATQAYQHCAKNNIQVHGGMGFTWEFDCHMYYRRANALALGL 355 Query 345 GSSARNRALLAER 357 GS + L +R Sbjct 356 GSLSYWEDQLIDR 368 >gi|316935132|ref|YP_004110114.1| acyl-CoA dehydrogenase domain-containing protein [Rhodopseudomonas palustris DX-1] gi|315602846|gb|ADU45381.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris DX-1] Length=375 Score = 194 bits (493), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 132/371 (36%), Positives = 190/371 (52%), Gaps = 17/371 (4%) Query 1 VDFRYSTEQDDFRASLRGFLG-RGAPVREMAAADGS---DRRLWQRLCTELELPALHVPP 56 ++F +S +Q R R FL + +P A +G DR LW+ L E+ + +P Sbjct 1 MNFDFSDDQKQLRDQARRFLAEKCSPKAVRAVLEGKADYDRELWKGLA-EMGFLGVAIPE 59 Query 57 EHGGLGATLVETAIAFAELGRALTPIPFAATVFAIEAILRM-GDDEQRKRLLAGLLTGAR 115 E+GG GA +E + ELGRAL P+PF++TV+ L + G +EQ+++ L + +G Sbjct 60 EYGGTGAGHLELCVIAEELGRALAPVPFSSTVYLAAEALLLAGSEEQKQKWLPKISSGEA 119 Query 116 IGTIAV-SGHDVASATTVRAVRRDGRPALTGECTPVLHGHVADLFVVPAVA-----DGSI 169 IGT+A+ G S V+ +G L+G PV G +AD +V A D + Sbjct 120 IGTLALFEGTGNPSPAAVKLAVSNG--TLSGTKKPVADGAIADFAIVAARTGNSGRDTDV 177 Query 170 VLHVVAADAPGVTVTPLPSFDITRPVATLRLAGSPAEPLTAGTP--DDMERVLDVARVLL 227 L +V A GVT L + D +R A L AG+ AEPL A + RV+D A VL+ Sbjct 178 SLFLVDLKAGGVTAKALQNVDPSRQQAELTFAGAKAEPLGAANEGWSILSRVMDRAAVLI 237 Query 228 AAEMLGGAEACLDLAVQYAGRRTQFDRPIGSFQAVKHACADMMIEIDATRATVMFAAMS- 286 A E +GGA+ L++ YA R F R IGSFQA+KH ADM + R+ + A + Sbjct 238 AFEQVGGADRALEMGRDYALDRIAFGRQIGSFQAIKHILADMYVSATLARSNSYYGAWAL 297 Query 287 AANGDELQTVAPLAKAQTAETFVLCAGSALQIHGAIAFTWEHDLHLYYRRAKTTEALFGS 346 + + EL A A+ + F CA +Q+HG + FTWE D HLYYRRA GS Sbjct 298 STDAAELPEAAASARISATQAFQHCAKQNIQVHGGMGFTWEFDCHLYYRRANALALSLGS 357 Query 347 SARNRALLAER 357 + L +R Sbjct 358 QSYWEDQLIDR 368 >gi|90423700|ref|YP_532070.1| acyl-CoA dehydrogenase-like protein [Rhodopseudomonas palustris BisB18] gi|90105714|gb|ABD87751.1| acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris BisB18] Length=375 Score = 193 bits (491), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 136/373 (37%), Positives = 191/373 (52%), Gaps = 21/373 (5%) Query 1 VDFRYSTEQDDFRASLRGFLGRGAP---VREMAAADGS---DRRLWQRLCTELELPALHV 54 ++F +S EQ R R FL P VRE+ DG DR LWQ E+ + + Sbjct 1 MNFDFSDEQKQLREQARRFLAEKCPPKAVREVL--DGKAPYDRALWQGF-AEMGFLGVAI 57 Query 55 PPEHGGLGATLVETAIAFAELGRALTPIPFAATVF-AIEAILRMGDDEQRKRLLAGLLTG 113 P ++GG GA +E + E+GRAL P+PF++TV+ A EA+L G + Q+K+ L + G Sbjct 58 PEQYGGAGAGQLELCVLAEEVGRALAPVPFSSTVYLAAEALLMAGSEAQKKKWLPLIAAG 117 Query 114 ARIGTIAV-SGHDVASATTVRAVRRDGRPALTGECTPVLHGHVADLFVVPAVA-----DG 167 IGT+A+ G S ++ DG L+G +PV G +A+ VV A D Sbjct 118 DAIGTLALFEGRGQPSPRAIQLSATDG--MLSGTKSPVPDGAIANFAVVAARTAASGRDS 175 Query 168 SIVLHVVAADAPGVTVTPLPSFDITRPVATLRLAGSPAEPLTAGTP--DDMERVLDVARV 225 I L +V A GV L + D +R A +R A AEPL + + R+LD A V Sbjct 176 DIALFLVDLSADGVETKALANLDPSRGQAEIRFANVKAEPLGEASEGWSLVTRLLDRAAV 235 Query 226 LLAAEMLGGAEACLDLAVQYAGRRTQFDRPIGSFQAVKHACADMMIEIDATRATVMFAAM 285 L+ E +GGA+ L++ YA R F RPIGSFQA+KH ADM + R+ + A Sbjct 236 LIGFEQVGGADRALEMGRDYALDRIAFGRPIGSFQAIKHMLADMYVAATLARSNCYYGAW 295 Query 286 S-AANGDELQTVAPLAKAQTAETFVLCAGSALQIHGAIAFTWEHDLHLYYRRAKTTEALF 344 + + N EL A A+ + + CA + +Q+HG + FTWE D HLYYRRA Sbjct 296 ALSTNAAELPEAAAAARISATQAYQHCAKNNIQVHGGMGFTWEFDCHLYYRRANALALAL 355 Query 345 GSSARNRALLAER 357 GS + L ER Sbjct 356 GSQSYWEDQLIER 368 Lambda K H 0.322 0.135 0.394 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 682094012100 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40