BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv1934c Length=409 Score E Sequences producing significant alignments: (Bits) Value gi|15609071|ref|NP_216450.1| acyl-CoA dehydrogenase FADE17 [Myco... 822 0.0 gi|298525428|ref|ZP_07012837.1| FadE17 protein [Mycobacterium tu... 821 0.0 gi|289443414|ref|ZP_06433158.1| acyl-CoA dehydrogenase fadE17 [M... 821 0.0 gi|289746128|ref|ZP_06505506.1| acyl-CoA dehydrogenase FadE17 [M... 820 0.0 gi|294996853|ref|ZP_06802544.1| acyl-CoA dehydrogenase FadE17 [M... 819 0.0 gi|15841405|ref|NP_336442.1| acyl-CoA dehydrogenase, putative [M... 819 0.0 gi|167970551|ref|ZP_02552828.1| acyl-CoA dehydrogenase fadE17 [M... 805 0.0 gi|340626944|ref|YP_004745396.1| putative acyl-CoA dehydrogenase... 782 0.0 gi|183982866|ref|YP_001851157.1| acyl-CoA dehydrogenase FadE17 [... 659 0.0 gi|120404960|ref|YP_954789.1| acyl-CoA dehydrogenase domain-cont... 652 0.0 gi|118618309|ref|YP_906641.1| acyl-CoA dehydrogenase FadE17 [Myc... 624 7e-177 gi|296169405|ref|ZP_06851028.1| acyl-CoA dehydrogenase [Mycobact... 533 3e-149 gi|300785717|ref|YP_003766008.1| acyl-CoA dehydrogenase [Amycola... 450 2e-124 gi|297204633|ref|ZP_06922030.1| pimeloyl-CoA dehydrogenase, larg... 427 1e-117 gi|111221937|ref|YP_712731.1| putative acyl-CoA dehydrogenase [F... 392 4e-107 gi|111222878|ref|YP_713672.1| putative acyl-CoA dehydrogenase [F... 386 4e-105 gi|288915980|ref|ZP_06410362.1| acyl-CoA dehydrogenase domain pr... 357 2e-96 gi|269127548|ref|YP_003300918.1| acyl-CoA dehydrogenase domain-c... 339 7e-91 gi|297204615|ref|ZP_06922012.1| pimeloyl-CoA dehydrogenase, larg... 336 5e-90 gi|339628107|ref|YP_004719750.1| acyl-CoA dehydrogenase [Sulfoba... 333 3e-89 gi|311744277|ref|ZP_07718081.1| acyl-CoA dehydrogenase [Aeromicr... 327 3e-87 gi|300785755|ref|YP_003766046.1| acyl-CoA dehydrogenase [Amycola... 323 5e-86 gi|302528334|ref|ZP_07280676.1| pimeloyl-CoA dehydrogenase, larg... 322 7e-86 gi|256390567|ref|YP_003112131.1| acyl-CoA dehydrogenase domain-c... 321 2e-85 gi|269836562|ref|YP_003318790.1| acyl-CoA dehydrogenase domain-c... 320 4e-85 gi|271963623|ref|YP_003337819.1| acyl-CoA dehydrogenase domain-c... 318 1e-84 gi|111021568|ref|YP_704540.1| acyl-CoA dehydrogenase [Rhodococcu... 317 2e-84 gi|226363951|ref|YP_002781733.1| acyl-CoA dehydrogenase [Rhodoco... 315 1e-83 gi|312138169|ref|YP_004005505.1| acyl-CoA dehydrogenase [Rhodoco... 315 1e-83 gi|296141506|ref|YP_003648749.1| acyl-CoA dehydrogenase domain-c... 314 1e-83 gi|312195766|ref|YP_004015827.1| acyl-CoA dehydrogenase domain-c... 314 2e-83 gi|326328928|ref|ZP_08195259.1| putative acyl-CoA dehydrogenase ... 312 5e-83 gi|169627700|ref|YP_001701349.1| acyl-CoA dehydrogenase FadE [My... 312 7e-83 gi|119716991|ref|YP_923956.1| acyl-CoA dehydrogenase domain-cont... 310 3e-82 gi|328881715|emb|CCA54954.1| putative acyl-CoA dehydrogenase [St... 310 4e-82 gi|288916053|ref|ZP_06410434.1| acyl-CoA dehydrogenase domain pr... 309 6e-82 gi|240169775|ref|ZP_04748434.1| putative acyl-CoA dehydrogenase ... 304 2e-80 gi|41406605|ref|NP_959441.1| FadE30 [Mycobacterium avium subsp. ... 303 3e-80 gi|296166604|ref|ZP_06849034.1| acyl-CoA dehydrogenase FadE30 [M... 302 6e-80 gi|342862389|ref|ZP_08719029.1| acyl-CoA dehydrogenase [Mycobact... 302 9e-80 gi|226304380|ref|YP_002764338.1| acyl-CoA dehydrogenase [Rhodoco... 301 2e-79 gi|229494291|ref|ZP_04388054.1| acyl-CoA dehydrogenase [Rhodococ... 300 2e-79 gi|340628524|ref|YP_004746976.1| putative acyl-CoA dehydrogenase... 300 2e-79 gi|15610696|ref|NP_218077.1| acyl-CoA dehydrogenase FADE30 [Myco... 300 3e-79 gi|254822642|ref|ZP_05227643.1| putative acyl-CoA dehydrogenase ... 300 4e-79 gi|315446185|ref|YP_004079064.1| acyl-CoA dehydrogenase [Mycobac... 300 4e-79 gi|324997820|ref|ZP_08118932.1| acyl-CoA dehydrogenase domain-co... 298 9e-79 gi|304312377|ref|YP_003811975.1| Predicted acyl-CoA dehydrogenas... 298 9e-79 gi|54022448|ref|YP_116690.1| putative acyl-CoA dehydrogenase [No... 298 9e-79 gi|343924358|ref|ZP_08763908.1| putative acyl-CoA dehydrogenase ... 298 1e-78 >gi|15609071|ref|NP_216450.1| acyl-CoA dehydrogenase FADE17 [Mycobacterium tuberculosis H37Rv] gi|31793126|ref|NP_855619.1| acyl-CoA dehydrogenase FADE17 [Mycobacterium bovis AF2122/97] gi|121637839|ref|YP_978062.1| putative acyl-CoA dehydrogenase fadE17 [Mycobacterium bovis BCG str. Pasteur 1173P2] 56 more sequence titles Length=409 Score = 822 bits (2123), Expect = 0.0, Method: Compositional matrix adjust. Identities = 408/409 (99%), Positives = 409/409 (100%), Gaps = 0/409 (0%) Query 1 VDVSYPPEAEAFRDRIREFVAEHLPPGWPGPGALPPHEREEFARHWRRALAGAGLVAVSW 60 +DVSYPPEAEAFRDRIREFVAEHLPPGWPGPGALPPHEREEFARHWRRALAGAGLVAVSW Sbjct 1 MDVSYPPEAEAFRDRIREFVAEHLPPGWPGPGALPPHEREEFARHWRRALAGAGLVAVSW 60 Query 61 PTEYGGGGLSPMEQVVLAEEFARAGAPERAENDLLGIDLLGNTLIALGSEAQKRHFLPRI 120 PTEYGGGGLSPMEQVVLAEEFARAGAPERAENDLLGIDLLGNTLIALGSEAQKRHFLPRI Sbjct 61 PTEYGGGGLSPMEQVVLAEEFARAGAPERAENDLLGIDLLGNTLIALGSEAQKRHFLPRI 120 Query 121 LSGEHRWCQGFSEPEAGSDLASVRTRGVLDGDEWVINGHKIWTSAGTTANWIFLLARTDP 180 LSGEHRWCQGFSEPEAGSDLASVRTRGVLDGDEWVINGHKIWTSAGTTANWIFLLARTDP Sbjct 121 LSGEHRWCQGFSEPEAGSDLASVRTRGVLDGDEWVINGHKIWTSAGTTANWIFLLARTDP 180 Query 181 SAAKHRGLSFLLVPMDQPGVVVRPIVNAAGHSSFSEVFLTDARTSAGNVVGRVGDGWSTA 240 SAAKHRGLSFLLVPMDQPGVVVRPIVNAAGHSSFSEVFLTDARTSAGNVVGRVGDGWSTA Sbjct 181 SAAKHRGLSFLLVPMDQPGVVVRPIVNAAGHSSFSEVFLTDARTSAGNVVGRVGDGWSTA 240 Query 241 MTLLGFERGSHIATAAIDFERDLQRLCELARDRGLHTDPRVRDGLAWCYARVQIMRYRGY 300 MTLLGFERGSHIATAAIDFERDLQRLCELARDRGLHTDPRVRDGLAWCYARVQIMRYRGY Sbjct 241 MTLLGFERGSHIATAAIDFERDLQRLCELARDRGLHTDPRVRDGLAWCYARVQIMRYRGY 300 Query 301 RDLTLALTGRPPGAEAAITKVIWSEYFRRYTDLAVEILGLEALGPRGPGNGGARLVPEAG 360 RDLTLALTGRPPGAEAAITKVIWSEYFRRYTDLAVEILGLEALGPRGPGNGGARLVPEAG Sbjct 301 RDLTLALTGRPPGAEAAITKVIWSEYFRRYTDLAVEILGLEALGPRGPGNGGARLVPEAG 360 Query 361 TPNSPACWMDELLYARAATIYAGSSQIQRNVIGERLLGLPKEPRPEVLC 409 TPNSPACWMDELLYARAATIYAGSSQIQRNVIGERLLGLPKEPRPEVLC Sbjct 361 TPNSPACWMDELLYARAATIYAGSSQIQRNVIGERLLGLPKEPRPEVLC 409 >gi|298525428|ref|ZP_07012837.1| FadE17 protein [Mycobacterium tuberculosis 94_M4241A] gi|298495222|gb|EFI30516.1| FadE17 protein [Mycobacterium tuberculosis 94_M4241A] gi|326903540|gb|EGE50473.1| acyl-CoA dehydrogenase fadE17 [Mycobacterium tuberculosis W-148] gi|339294867|gb|AEJ46978.1| acyl-CoA dehydrogenase fadE17 [Mycobacterium tuberculosis CCDC5079] Length=409 Score = 821 bits (2120), Expect = 0.0, Method: Compositional matrix adjust. Identities = 407/409 (99%), Positives = 408/409 (99%), Gaps = 0/409 (0%) Query 1 VDVSYPPEAEAFRDRIREFVAEHLPPGWPGPGALPPHEREEFARHWRRALAGAGLVAVSW 60 +DVSYPPEAEAFRDRIREFVAEHLPPGWPGPGALPPHEREEFARHWRRALAGAGLVAVSW Sbjct 1 MDVSYPPEAEAFRDRIREFVAEHLPPGWPGPGALPPHEREEFARHWRRALAGAGLVAVSW 60 Query 61 PTEYGGGGLSPMEQVVLAEEFARAGAPERAENDLLGIDLLGNTLIALGSEAQKRHFLPRI 120 PTEYGGGGLSPMEQVVLAEEFARAGAPERAENDLLGIDLLGNTLIALGSEAQKRHFLPRI Sbjct 61 PTEYGGGGLSPMEQVVLAEEFARAGAPERAENDLLGIDLLGNTLIALGSEAQKRHFLPRI 120 Query 121 LSGEHRWCQGFSEPEAGSDLASVRTRGVLDGDEWVINGHKIWTSAGTTANWIFLLARTDP 180 LSGEHRWCQGFSEPEAGSDLASVRTRGVLDGDEWVINGHKIWTSAGTTANW FLLARTDP Sbjct 121 LSGEHRWCQGFSEPEAGSDLASVRTRGVLDGDEWVINGHKIWTSAGTTANWTFLLARTDP 180 Query 181 SAAKHRGLSFLLVPMDQPGVVVRPIVNAAGHSSFSEVFLTDARTSAGNVVGRVGDGWSTA 240 SAAKHRGLSFLLVPMDQPGVVVRPIVNAAGHSSFSEVFLTDARTSAGNVVGRVGDGWSTA Sbjct 181 SAAKHRGLSFLLVPMDQPGVVVRPIVNAAGHSSFSEVFLTDARTSAGNVVGRVGDGWSTA 240 Query 241 MTLLGFERGSHIATAAIDFERDLQRLCELARDRGLHTDPRVRDGLAWCYARVQIMRYRGY 300 MTLLGFERGSHIATAAIDFERDLQRLCELARDRGLHTDPRVRDGLAWCYARVQIMRYRGY Sbjct 241 MTLLGFERGSHIATAAIDFERDLQRLCELARDRGLHTDPRVRDGLAWCYARVQIMRYRGY 300 Query 301 RDLTLALTGRPPGAEAAITKVIWSEYFRRYTDLAVEILGLEALGPRGPGNGGARLVPEAG 360 RDLTLALTGRPPGAEAAITKVIWSEYFRRYTDLAVEILGLEALGPRGPGNGGARLVPEAG Sbjct 301 RDLTLALTGRPPGAEAAITKVIWSEYFRRYTDLAVEILGLEALGPRGPGNGGARLVPEAG 360 Query 361 TPNSPACWMDELLYARAATIYAGSSQIQRNVIGERLLGLPKEPRPEVLC 409 TPNSPACWMDELLYARAATIYAGSSQIQRNVIGERLLGLPKEPRPEVLC Sbjct 361 TPNSPACWMDELLYARAATIYAGSSQIQRNVIGERLLGLPKEPRPEVLC 409 >gi|289443414|ref|ZP_06433158.1| acyl-CoA dehydrogenase fadE17 [Mycobacterium tuberculosis T46] gi|289570018|ref|ZP_06450245.1| acyl-CoA dehydrogenase fadE17 [Mycobacterium tuberculosis T17] gi|289750517|ref|ZP_06509895.1| acyl-CoA dehydrogenase fadE17 [Mycobacterium tuberculosis T92] gi|289416333|gb|EFD13573.1| acyl-CoA dehydrogenase fadE17 [Mycobacterium tuberculosis T46] gi|289543772|gb|EFD47420.1| acyl-CoA dehydrogenase fadE17 [Mycobacterium tuberculosis T17] gi|289691104|gb|EFD58533.1| acyl-CoA dehydrogenase fadE17 [Mycobacterium tuberculosis T92] Length=409 Score = 821 bits (2120), Expect = 0.0, Method: Compositional matrix adjust. Identities = 407/409 (99%), Positives = 409/409 (100%), Gaps = 0/409 (0%) Query 1 VDVSYPPEAEAFRDRIREFVAEHLPPGWPGPGALPPHEREEFARHWRRALAGAGLVAVSW 60 +DVSYPPEAEAFRDRIREFVAEHLPPGWPGPGALPPHEREEFARHWRRALAGAGLVAVSW Sbjct 1 MDVSYPPEAEAFRDRIREFVAEHLPPGWPGPGALPPHEREEFARHWRRALAGAGLVAVSW 60 Query 61 PTEYGGGGLSPMEQVVLAEEFARAGAPERAENDLLGIDLLGNTLIALGSEAQKRHFLPRI 120 PTEYGGGGLSPMEQVVLAEEFARAGAPERAENDLLGIDLLGNTLIALGSEAQKRHFLPRI Sbjct 61 PTEYGGGGLSPMEQVVLAEEFARAGAPERAENDLLGIDLLGNTLIALGSEAQKRHFLPRI 120 Query 121 LSGEHRWCQGFSEPEAGSDLASVRTRGVLDGDEWVINGHKIWTSAGTTANWIFLLARTDP 180 LSGEHRWCQGFSEPEAGSDLASVRTRGVL+GDEWVINGHKIWTSAGTTANWIFLLARTDP Sbjct 121 LSGEHRWCQGFSEPEAGSDLASVRTRGVLNGDEWVINGHKIWTSAGTTANWIFLLARTDP 180 Query 181 SAAKHRGLSFLLVPMDQPGVVVRPIVNAAGHSSFSEVFLTDARTSAGNVVGRVGDGWSTA 240 SAAKHRGLSFLLVPMDQPGVVVRPIVNAAGHSSFSEVFLTDARTSAGNVVGRVGDGWSTA Sbjct 181 SAAKHRGLSFLLVPMDQPGVVVRPIVNAAGHSSFSEVFLTDARTSAGNVVGRVGDGWSTA 240 Query 241 MTLLGFERGSHIATAAIDFERDLQRLCELARDRGLHTDPRVRDGLAWCYARVQIMRYRGY 300 MTLLGFERGSHIATAAIDFERDLQRLCELARDRGLHTDPRVRDGLAWCYARVQIMRYRGY Sbjct 241 MTLLGFERGSHIATAAIDFERDLQRLCELARDRGLHTDPRVRDGLAWCYARVQIMRYRGY 300 Query 301 RDLTLALTGRPPGAEAAITKVIWSEYFRRYTDLAVEILGLEALGPRGPGNGGARLVPEAG 360 RDLTLALTGRPPGAEAAITKVIWSEYFRRYTDLAVEILGLEALGPRGPGNGGARLVPEAG Sbjct 301 RDLTLALTGRPPGAEAAITKVIWSEYFRRYTDLAVEILGLEALGPRGPGNGGARLVPEAG 360 Query 361 TPNSPACWMDELLYARAATIYAGSSQIQRNVIGERLLGLPKEPRPEVLC 409 TPNSPACWMDELLYARAATIYAGSSQIQRNVIGERLLGLPKEPRPEVLC Sbjct 361 TPNSPACWMDELLYARAATIYAGSSQIQRNVIGERLLGLPKEPRPEVLC 409 >gi|289746128|ref|ZP_06505506.1| acyl-CoA dehydrogenase FadE17 [Mycobacterium tuberculosis 02_1987] gi|289686656|gb|EFD54144.1| acyl-CoA dehydrogenase FadE17 [Mycobacterium tuberculosis 02_1987] Length=409 Score = 820 bits (2117), Expect = 0.0, Method: Compositional matrix adjust. Identities = 406/409 (99%), Positives = 408/409 (99%), Gaps = 0/409 (0%) Query 1 VDVSYPPEAEAFRDRIREFVAEHLPPGWPGPGALPPHEREEFARHWRRALAGAGLVAVSW 60 +DVSYPPEAEAFRDRIREFVAEHLPPGWPGPGALPPHEREEFARHWRRALAGAGLVAVSW Sbjct 1 MDVSYPPEAEAFRDRIREFVAEHLPPGWPGPGALPPHEREEFARHWRRALAGAGLVAVSW 60 Query 61 PTEYGGGGLSPMEQVVLAEEFARAGAPERAENDLLGIDLLGNTLIALGSEAQKRHFLPRI 120 PTEYGGGGLSPMEQVVLAEEFARAGAPERAENDLLGIDLLGNTLIALGSEAQKRHFLPRI Sbjct 61 PTEYGGGGLSPMEQVVLAEEFARAGAPERAENDLLGIDLLGNTLIALGSEAQKRHFLPRI 120 Query 121 LSGEHRWCQGFSEPEAGSDLASVRTRGVLDGDEWVINGHKIWTSAGTTANWIFLLARTDP 180 LSGEHRWCQGFSEPEAGSDLASVRTRGVLDGDEWVINGHKIWTSAGTTANW FLLARTDP Sbjct 121 LSGEHRWCQGFSEPEAGSDLASVRTRGVLDGDEWVINGHKIWTSAGTTANWTFLLARTDP 180 Query 181 SAAKHRGLSFLLVPMDQPGVVVRPIVNAAGHSSFSEVFLTDARTSAGNVVGRVGDGWSTA 240 SAAKHRGLSFLLVPMDQPGVVVRPIVNAAGHSSFSEVFLTDARTSAGNVVGRVGDGWSTA Sbjct 181 SAAKHRGLSFLLVPMDQPGVVVRPIVNAAGHSSFSEVFLTDARTSAGNVVGRVGDGWSTA 240 Query 241 MTLLGFERGSHIATAAIDFERDLQRLCELARDRGLHTDPRVRDGLAWCYARVQIMRYRGY 300 MTLLGFERGSHIATAAIDFERDLQRLCELARDRGLHTDPRVRDGLAWCYARVQIMRYRGY Sbjct 241 MTLLGFERGSHIATAAIDFERDLQRLCELARDRGLHTDPRVRDGLAWCYARVQIMRYRGY 300 Query 301 RDLTLALTGRPPGAEAAITKVIWSEYFRRYTDLAVEILGLEALGPRGPGNGGARLVPEAG 360 RDLTLALTGRPPGAEAAITKVIWSEYFRRYTDLAVEILGLEALGPRGPGNGGARLVPEAG Sbjct 301 RDLTLALTGRPPGAEAAITKVIWSEYFRRYTDLAVEILGLEALGPRGPGNGGARLVPEAG 360 Query 361 TPNSPACWMDELLYARAATIYAGSSQIQRNVIGERLLGLPKEPRPEVLC 409 TPNSPACWMDELLYARAATIYAGSSQIQRNVIG+RLLGLPKEPRPEVLC Sbjct 361 TPNSPACWMDELLYARAATIYAGSSQIQRNVIGKRLLGLPKEPRPEVLC 409 >gi|294996853|ref|ZP_06802544.1| acyl-CoA dehydrogenase FadE17 [Mycobacterium tuberculosis 210] gi|339298491|gb|AEJ50601.1| acyl-CoA dehydrogenase FadE17 [Mycobacterium tuberculosis CCDC5180] Length=409 Score = 819 bits (2115), Expect = 0.0, Method: Compositional matrix adjust. Identities = 406/409 (99%), Positives = 408/409 (99%), Gaps = 0/409 (0%) Query 1 VDVSYPPEAEAFRDRIREFVAEHLPPGWPGPGALPPHEREEFARHWRRALAGAGLVAVSW 60 +DVSYPPEAEAFRDRIREFVAEHLPPGWPGPGALPPHEREEFARHWRRALAGAGLVAVSW Sbjct 1 MDVSYPPEAEAFRDRIREFVAEHLPPGWPGPGALPPHEREEFARHWRRALAGAGLVAVSW 60 Query 61 PTEYGGGGLSPMEQVVLAEEFARAGAPERAENDLLGIDLLGNTLIALGSEAQKRHFLPRI 120 PTEYGGGGLSPMEQVVLAEEFARAGAPERAENDLLGIDLLG+TLIALGSEAQKRHFLPRI Sbjct 61 PTEYGGGGLSPMEQVVLAEEFARAGAPERAENDLLGIDLLGSTLIALGSEAQKRHFLPRI 120 Query 121 LSGEHRWCQGFSEPEAGSDLASVRTRGVLDGDEWVINGHKIWTSAGTTANWIFLLARTDP 180 LSGEHRWCQGFSEPEAGSDLASVRTRGVLDGDEWVINGHKIWTSAGTTANW FLLARTDP Sbjct 121 LSGEHRWCQGFSEPEAGSDLASVRTRGVLDGDEWVINGHKIWTSAGTTANWTFLLARTDP 180 Query 181 SAAKHRGLSFLLVPMDQPGVVVRPIVNAAGHSSFSEVFLTDARTSAGNVVGRVGDGWSTA 240 SAAKHRGLSFLLVPMDQPGVVVRPIVNAAGHSSFSEVFLTDARTSAGNVVGRVGDGWSTA Sbjct 181 SAAKHRGLSFLLVPMDQPGVVVRPIVNAAGHSSFSEVFLTDARTSAGNVVGRVGDGWSTA 240 Query 241 MTLLGFERGSHIATAAIDFERDLQRLCELARDRGLHTDPRVRDGLAWCYARVQIMRYRGY 300 MTLLGFERGSHIATAAIDFERDLQRLCELARDRGLHTDPRVRDGLAWCYARVQIMRYRGY Sbjct 241 MTLLGFERGSHIATAAIDFERDLQRLCELARDRGLHTDPRVRDGLAWCYARVQIMRYRGY 300 Query 301 RDLTLALTGRPPGAEAAITKVIWSEYFRRYTDLAVEILGLEALGPRGPGNGGARLVPEAG 360 RDLTLALTGRPPGAEAAITKVIWSEYFRRYTDLAVEILGLEALGPRGPGNGGARLVPEAG Sbjct 301 RDLTLALTGRPPGAEAAITKVIWSEYFRRYTDLAVEILGLEALGPRGPGNGGARLVPEAG 360 Query 361 TPNSPACWMDELLYARAATIYAGSSQIQRNVIGERLLGLPKEPRPEVLC 409 TPNSPACWMDELLYARAATIYAGSSQIQRNVIGERLLGLPKEPRPEVLC Sbjct 361 TPNSPACWMDELLYARAATIYAGSSQIQRNVIGERLLGLPKEPRPEVLC 409 >gi|15841405|ref|NP_336442.1| acyl-CoA dehydrogenase, putative [Mycobacterium tuberculosis CDC1551] gi|13881642|gb|AAK46256.1| acyl-CoA dehydrogenase, putative [Mycobacterium tuberculosis CDC1551] Length=409 Score = 819 bits (2115), Expect = 0.0, Method: Compositional matrix adjust. Identities = 406/409 (99%), Positives = 407/409 (99%), Gaps = 0/409 (0%) Query 1 VDVSYPPEAEAFRDRIREFVAEHLPPGWPGPGALPPHEREEFARHWRRALAGAGLVAVSW 60 +DVSYPPEAEAFRDRIREFVAEHLPPGWPGPGALPPHEREEFARHWRRALAGAGLVAVSW Sbjct 1 MDVSYPPEAEAFRDRIREFVAEHLPPGWPGPGALPPHEREEFARHWRRALAGAGLVAVSW 60 Query 61 PTEYGGGGLSPMEQVVLAEEFARAGAPERAENDLLGIDLLGNTLIALGSEAQKRHFLPRI 120 PTEY GGGLSPMEQVVLAEEFARAGAPERAENDL GIDLLGNTLIALGSEAQKRHFLPRI Sbjct 61 PTEYXGGGLSPMEQVVLAEEFARAGAPERAENDLFGIDLLGNTLIALGSEAQKRHFLPRI 120 Query 121 LSGEHRWCQGFSEPEAGSDLASVRTRGVLDGDEWVINGHKIWTSAGTTANWIFLLARTDP 180 LSGEHRWCQGFSEPEAGSDLASVRTRGVLDGDEWVINGHKIWTSAGTTANWIFLLARTDP Sbjct 121 LSGEHRWCQGFSEPEAGSDLASVRTRGVLDGDEWVINGHKIWTSAGTTANWIFLLARTDP 180 Query 181 SAAKHRGLSFLLVPMDQPGVVVRPIVNAAGHSSFSEVFLTDARTSAGNVVGRVGDGWSTA 240 SAAKHRGLSFLLVPMDQPGVVVRPIVNAAGHSSFSEVFLTDARTSAGNVVGRVGDGWSTA Sbjct 181 SAAKHRGLSFLLVPMDQPGVVVRPIVNAAGHSSFSEVFLTDARTSAGNVVGRVGDGWSTA 240 Query 241 MTLLGFERGSHIATAAIDFERDLQRLCELARDRGLHTDPRVRDGLAWCYARVQIMRYRGY 300 MTLLGFERGSHIATAAIDFERDLQRLCELARDRGLHTDPRVRDGLAWCYARVQIMRYRGY Sbjct 241 MTLLGFERGSHIATAAIDFERDLQRLCELARDRGLHTDPRVRDGLAWCYARVQIMRYRGY 300 Query 301 RDLTLALTGRPPGAEAAITKVIWSEYFRRYTDLAVEILGLEALGPRGPGNGGARLVPEAG 360 RDLTLALTGRPPGAEAAITKVIWSEYFRRYTDLAVEILGLEALGPRGPGNGGARLVPEAG Sbjct 301 RDLTLALTGRPPGAEAAITKVIWSEYFRRYTDLAVEILGLEALGPRGPGNGGARLVPEAG 360 Query 361 TPNSPACWMDELLYARAATIYAGSSQIQRNVIGERLLGLPKEPRPEVLC 409 TPNSPACWMDELLYARAATIYAGSSQIQRNVIGERLLGLPKEPRPEVLC Sbjct 361 TPNSPACWMDELLYARAATIYAGSSQIQRNVIGERLLGLPKEPRPEVLC 409 >gi|167970551|ref|ZP_02552828.1| acyl-CoA dehydrogenase fadE17 [Mycobacterium tuberculosis H37Ra] Length=409 Score = 805 bits (2079), Expect = 0.0, Method: Compositional matrix adjust. Identities = 401/409 (99%), Positives = 402/409 (99%), Gaps = 0/409 (0%) Query 1 VDVSYPPEAEAFRDRIREFVAEHLPPGWPGPGALPPHEREEFARHWRRALAGAGLVAVSW 60 +DVSYPPEAEAFRDRIREFVAEHLPPGWPGPGALPPHEREEFARHWRRALAGAGLVAVSW Sbjct 1 MDVSYPPEAEAFRDRIREFVAEHLPPGWPGPGALPPHEREEFARHWRRALAGAGLVAVSW 60 Query 61 PTEYGGGGLSPMEQVVLAEEFARAGAPERAENDLLGIDLLGNTLIALGSEAQKRHFLPRI 120 PTEYGGGGLSPMEQVVLAEEFARAGAPERAENDLLGIDLLGNTLIALGSEAQKRHFLPRI Sbjct 61 PTEYGGGGLSPMEQVVLAEEFARAGAPERAENDLLGIDLLGNTLIALGSEAQKRHFLPRI 120 Query 121 LSGEHRWCQGFSEPEAGSDLASVRTRGVLDGDEWVINGHKIWTSAGTTANWIFLLARTDP 180 LSGEHRWCQ GSDLASVRTRGVLDGDEWVINGHKIWTSAGTTANWIFLLARTDP Sbjct 121 LSGEHRWCQASPSRRPGSDLASVRTRGVLDGDEWVINGHKIWTSAGTTANWIFLLARTDP 180 Query 181 SAAKHRGLSFLLVPMDQPGVVVRPIVNAAGHSSFSEVFLTDARTSAGNVVGRVGDGWSTA 240 SAAKHRGLSFLLVPMDQPGVVVRPIVNAAGHSSFSEVFLTDARTSAGNVVGRVGDGWSTA Sbjct 181 SAAKHRGLSFLLVPMDQPGVVVRPIVNAAGHSSFSEVFLTDARTSAGNVVGRVGDGWSTA 240 Query 241 MTLLGFERGSHIATAAIDFERDLQRLCELARDRGLHTDPRVRDGLAWCYARVQIMRYRGY 300 MTLLGFERGSHIATAAIDFERDLQRLCELARDRGLHTDPRVRDGLAWCYARVQIMRYRGY Sbjct 241 MTLLGFERGSHIATAAIDFERDLQRLCELARDRGLHTDPRVRDGLAWCYARVQIMRYRGY 300 Query 301 RDLTLALTGRPPGAEAAITKVIWSEYFRRYTDLAVEILGLEALGPRGPGNGGARLVPEAG 360 RDLTLALTGRPPGAEAAITKVIWSEYFRRYTDLAVEILGLEALGPRGPGNGGARLVPEAG Sbjct 301 RDLTLALTGRPPGAEAAITKVIWSEYFRRYTDLAVEILGLEALGPRGPGNGGARLVPEAG 360 Query 361 TPNSPACWMDELLYARAATIYAGSSQIQRNVIGERLLGLPKEPRPEVLC 409 TPNSPACWMDELLYARAATIYAGSSQIQRNVIGERLLGLPKEPRPEVLC Sbjct 361 TPNSPACWMDELLYARAATIYAGSSQIQRNVIGERLLGLPKEPRPEVLC 409 >gi|340626944|ref|YP_004745396.1| putative acyl-CoA dehydrogenase FADE17 [Mycobacterium canettii CIPT 140010059] gi|340005134|emb|CCC44283.1| putative acyl-CoA dehydrogenase FADE17 [Mycobacterium canettii CIPT 140010059] Length=409 Score = 782 bits (2020), Expect = 0.0, Method: Compositional matrix adjust. Identities = 384/409 (94%), Positives = 393/409 (97%), Gaps = 0/409 (0%) Query 1 VDVSYPPEAEAFRDRIREFVAEHLPPGWPGPGALPPHEREEFARHWRRALAGAGLVAVSW 60 +D+SYPPEAEAFR RIR F+ EHLPPGW GPGALPP EREEFARHWRR LAGAGL+AVSW Sbjct 1 MDISYPPEAEAFRGRIRAFLTEHLPPGWSGPGALPPDEREEFARHWRRTLAGAGLIAVSW 60 Query 61 PTEYGGGGLSPMEQVVLAEEFARAGAPERAENDLLGIDLLGNTLIALGSEAQKRHFLPRI 120 P EYGGGGLSP++QVVLAEEFA AGAPERAENDLLGIDLLGNTLIALGSE QKRHFLPRI Sbjct 61 PAEYGGGGLSPIDQVVLAEEFAHAGAPERAENDLLGIDLLGNTLIALGSEEQKRHFLPRI 120 Query 121 LSGEHRWCQGFSEPEAGSDLASVRTRGVLDGDEWVINGHKIWTSAGTTANWIFLLARTDP 180 L+G HRWCQGFSEPEAGSDLASVRTR VLDGDEWVINGHKIWTSA TANWIFLLARTDP Sbjct 121 LAGTHRWCQGFSEPEAGSDLASVRTRAVLDGDEWVINGHKIWTSAAATANWIFLLARTDP 180 Query 181 SAAKHRGLSFLLVPMDQPGVVVRPIVNAAGHSSFSEVFLTDARTSAGNVVGRVGDGWSTA 240 SAAKHRGLSFLLVPMDQPGVVVRPIVNAAGHSSFSEVFL DARTSAGN VG+VGDGWSTA Sbjct 181 SAAKHRGLSFLLVPMDQPGVVVRPIVNAAGHSSFSEVFLADARTSAGNAVGKVGDGWSTA 240 Query 241 MTLLGFERGSHIATAAIDFERDLQRLCELARDRGLHTDPRVRDGLAWCYARVQIMRYRGY 300 +TLLGFERGSHI TAAIDFERDLQRLCELARDRGLHTDPRVRDGLAWCYARVQIMRYRGY Sbjct 241 LTLLGFERGSHITTAAIDFERDLQRLCELARDRGLHTDPRVRDGLAWCYARVQIMRYRGY 300 Query 301 RDLTLALTGRPPGAEAAITKVIWSEYFRRYTDLAVEILGLEALGPRGPGNGGARLVPEAG 360 RDLTLALTGRPPGAEAAITKVIWSEYFRRYTDLAVEILGLEALGPRGPGNGGARLVPEAG Sbjct 301 RDLTLALTGRPPGAEAAITKVIWSEYFRRYTDLAVEILGLEALGPRGPGNGGARLVPEAG 360 Query 361 TPNSPACWMDELLYARAATIYAGSSQIQRNVIGERLLGLPKEPRPEVLC 409 TPNSPACWMDELLYARAATIYAGSSQIQRNVIGERLLGLPKEPRPEVLC Sbjct 361 TPNSPACWMDELLYARAATIYAGSSQIQRNVIGERLLGLPKEPRPEVLC 409 >gi|183982866|ref|YP_001851157.1| acyl-CoA dehydrogenase FadE17 [Mycobacterium marinum M] gi|183176192|gb|ACC41302.1| acyl-CoA dehydrogenase FadE17 [Mycobacterium marinum M] Length=409 Score = 659 bits (1700), Expect = 0.0, Method: Compositional matrix adjust. Identities = 319/408 (79%), Positives = 353/408 (87%), Gaps = 0/408 (0%) Query 1 VDVSYPPEAEAFRDRIREFVAEHLPPGWPGPGALPPHEREEFARHWRRALAGAGLVAVSW 60 +DV+YPPEAE FR+R+R F+ EHLP GW GPGAL +R+ FA WR+ L AGL+AVSW Sbjct 1 MDVAYPPEAEEFRERVRAFLDEHLPCGWSGPGALAVQDRKAFAARWRQLLVAAGLIAVSW 60 Query 61 PTEYGGGGLSPMEQVVLAEEFARAGAPERAENDLLGIDLLGNTLIALGSEAQKRHFLPRI 120 P EYGGGG SP+EQVVLAEEFARAGAPER ENDL G+DLLGNTLIALG+EAQKRHFLPRI Sbjct 61 PKEYGGGGYSPVEQVVLAEEFARAGAPEREENDLFGVDLLGNTLIALGTEAQKRHFLPRI 120 Query 121 LSGEHRWCQGFSEPEAGSDLASVRTRGVLDGDEWVINGHKIWTSAGTTANWIFLLARTDP 180 L+G+ RWCQGFSEPEAGSDLASVRTR VLDGD+WVING KIWTSAG+TANWIF+LARTDP Sbjct 121 LTGDDRWCQGFSEPEAGSDLASVRTRAVLDGDQWVINGQKIWTSAGSTANWIFVLARTDP 180 Query 181 SAAKHRGLSFLLVPMDQPGVVVRPIVNAAGHSSFSEVFLTDARTSAGNVVGRVGDGWSTA 240 A KH+GLS LLVPMDQP VVVRPIVNAAGHS F+EVF DART NVVG VG GW+ A Sbjct 181 VAPKHQGLSLLLVPMDQPAVVVRPIVNAAGHSLFNEVFFADARTGVANVVGEVGSGWTAA 240 Query 241 MTLLGFERGSHIATAAIDFERDLQRLCELARDRGLHTDPRVRDGLAWCYARVQIMRYRGY 300 M+LLGFERG+ T AIDF RDL RLC+LAR RGL +DPR+RD LAWCY+R QIMRYRGY Sbjct 241 MSLLGFERGAQATTGAIDFARDLSRLCDLARARGLDSDPRIRDRLAWCYSRTQIMRYRGY 300 Query 301 RDLTLALTGRPPGAEAAITKVIWSEYFRRYTDLAVEILGLEALGPRGPGNGGARLVPEAG 360 R LT AL G PGAEAAI+KVIWSEYF+RYT+LAVEILGL+AL P GPGNG AR+VP+AG Sbjct 301 RSLTWALNGLLPGAEAAISKVIWSEYFQRYTELAVEILGLDALCPSGPGNGEARVVPQAG 360 Query 361 TPNSPACWMDELLYARAATIYAGSSQIQRNVIGERLLGLPKEPRPEVL 408 T NSPACWMDELLYARAATIYAGSSQIQRNVIGE+LLGLPKEPR E + Sbjct 361 TANSPACWMDELLYARAATIYAGSSQIQRNVIGEQLLGLPKEPRREAV 408 >gi|120404960|ref|YP_954789.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium vanbaalenii PYR-1] gi|119957778|gb|ABM14783.1| acyl-CoA dehydrogenase domain protein [Mycobacterium vanbaalenii PYR-1] Length=419 Score = 652 bits (1683), Expect = 0.0, Method: Compositional matrix adjust. Identities = 322/404 (80%), Positives = 351/404 (87%), Gaps = 0/404 (0%) Query 1 VDVSYPPEAEAFRDRIREFVAEHLPPGWPGPGALPPHEREEFARHWRRALAGAGLVAVSW 60 +DV YPP+AEAFRDRIR +AEHLPP W G GAL P ER AR WR++LA AGLVAVSW Sbjct 1 MDVDYPPQAEAFRDRIRALLAEHLPPDWSGGGALAPEERAAVARRWRQSLAAAGLVAVSW 60 Query 61 PTEYGGGGLSPMEQVVLAEEFARAGAPERAENDLLGIDLLGNTLIALGSEAQKRHFLPRI 120 P YGG GLS +EQVVL EEFARAGAPERAENDLLGI LLGNTLIALG+E QKRHFLPRI Sbjct 61 PKAYGGAGLSVIEQVVLDEEFARAGAPERAENDLLGIQLLGNTLIALGTEEQKRHFLPRI 120 Query 121 LSGEHRWCQGFSEPEAGSDLASVRTRGVLDGDEWVINGHKIWTSAGTTANWIFLLARTDP 180 LS E RWCQGFSEPEAGSDLASVRTR VLD DEWVING KIWTSAG TANWIF+LARTD Sbjct 121 LSAEDRWCQGFSEPEAGSDLASVRTRAVLDDDEWVINGQKIWTSAGPTANWIFVLARTDT 180 Query 181 SAAKHRGLSFLLVPMDQPGVVVRPIVNAAGHSSFSEVFLTDARTSAGNVVGRVGDGWSTA 240 A KH+GLS LLVP+DQPGVVVRPIVNAAGH+SFSEVF TDART A NVVGRVGDGW A Sbjct 181 EAPKHKGLSLLLVPIDQPGVVVRPIVNAAGHASFSEVFFTDARTPAVNVVGRVGDGWPAA 240 Query 241 MTLLGFERGSHIATAAIDFERDLQRLCELARDRGLHTDPRVRDGLAWCYARVQIMRYRGY 300 MT+LGFERGS + TAAI+F R++ RL ELARDRGLHTD R+RDGLAWCY+RVQIMR++GY Sbjct 241 MTVLGFERGSQVTTAAINFGREMDRLRELARDRGLHTDARIRDGLAWCYSRVQIMRFQGY 300 Query 301 RDLTLALTGRPPGAEAAITKVIWSEYFRRYTDLAVEILGLEALGPRGPGNGGARLVPEAG 360 R LT L G+ PG EAAI+KV+WSE+FRRYT+LAVEILGLEAL P GPGNG A +VPE G Sbjct 301 RGLTSLLAGQRPGREAAISKVVWSEFFRRYTELAVEILGLEALSPAGPGNGEALIVPEPG 360 Query 361 TPNSPACWMDELLYARAATIYAGSSQIQRNVIGERLLGLPKEPR 404 TPNS ACWMDELLYARA+TIYAGSSQIQRNVIGE+LLGLP+EPR Sbjct 361 TPNSAACWMDELLYARASTIYAGSSQIQRNVIGEQLLGLPREPR 404 >gi|118618309|ref|YP_906641.1| acyl-CoA dehydrogenase FadE17 [Mycobacterium ulcerans Agy99] gi|118570419|gb|ABL05170.1| acyl-CoA dehydrogenase FadE17 [Mycobacterium ulcerans Agy99] Length=390 Score = 624 bits (1610), Expect = 7e-177, Method: Compositional matrix adjust. Identities = 304/387 (79%), Positives = 333/387 (87%), Gaps = 0/387 (0%) Query 22 EHLPPGWPGPGALPPHEREEFARHWRRALAGAGLVAVSWPTEYGGGGLSPMEQVVLAEEF 81 EHLP GW GPGAL +R+ FA WR+ L AGL+AVSWP EYGGGG SP+EQVVLAEEF Sbjct 3 EHLPCGWSGPGALAVQDRKAFAARWRQLLVAAGLIAVSWPKEYGGGGYSPVEQVVLAEEF 62 Query 82 ARAGAPERAENDLLGIDLLGNTLIALGSEAQKRHFLPRILSGEHRWCQGFSEPEAGSDLA 141 ARAGAPER ENDL G+DLL NTLIALG+EAQKRHFLPRIL+G+ RWCQGFSEPEAGSDLA Sbjct 63 ARAGAPEREENDLFGVDLLCNTLIALGTEAQKRHFLPRILTGDDRWCQGFSEPEAGSDLA 122 Query 142 SVRTRGVLDGDEWVINGHKIWTSAGTTANWIFLLARTDPSAAKHRGLSFLLVPMDQPGVV 201 SVRTR VLDGD+WVING KIWTSAG+TANWIF+LARTDP A KH+GLS LLVPMDQP VV Sbjct 123 SVRTRAVLDGDQWVINGQKIWTSAGSTANWIFVLARTDPVAPKHQGLSLLLVPMDQPAVV 182 Query 202 VRPIVNAAGHSSFSEVFLTDARTSAGNVVGRVGDGWSTAMTLLGFERGSHIATAAIDFER 261 VRPIVNAAGHS F+EVF DART NVVG VG GW+ AM+LLGFERG+ T AIDF R Sbjct 183 VRPIVNAAGHSLFNEVFFADARTGVANVVGEVGSGWTAAMSLLGFERGAQATTGAIDFAR 242 Query 262 DLQRLCELARDRGLHTDPRVRDGLAWCYARVQIMRYRGYRDLTLALTGRPPGAEAAITKV 321 DL RLC+LAR RGL +DPR+RD LAWCY+R QIMRYRGY LT AL G PGAEAAI+KV Sbjct 243 DLSRLCDLARARGLDSDPRIRDRLAWCYSRTQIMRYRGYCSLTWALNGVLPGAEAAISKV 302 Query 322 IWSEYFRRYTDLAVEILGLEALGPRGPGNGGARLVPEAGTPNSPACWMDELLYARAATIY 381 IWSEYF+RYT+LAVEILGL+AL P GPGNG AR+VP+AGT NSPACWMDELLYARAATIY Sbjct 303 IWSEYFQRYTELAVEILGLDALCPSGPGNGEARVVPQAGTANSPACWMDELLYARAATIY 362 Query 382 AGSSQIQRNVIGERLLGLPKEPRPEVL 408 AGSSQIQRNVIGE+LLGLPKEPR E + Sbjct 363 AGSSQIQRNVIGEQLLGLPKEPRREAV 389 >gi|296169405|ref|ZP_06851028.1| acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295895955|gb|EFG75647.1| acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum ATCC BAA-614] Length=405 Score = 533 bits (1372), Expect = 3e-149, Method: Compositional matrix adjust. Identities = 259/404 (65%), Positives = 306/404 (76%), Gaps = 0/404 (0%) Query 1 VDVSYPPEAEAFRDRIREFVAEHLPPGWPGPGALPPHEREEFARHWRRALAGAGLVAVSW 60 +D+SYPP AEAFR R+R+F+ ++P + G GAL R+EF R WR+ LA GL+AV W Sbjct 1 MDLSYPPSAEAFRSRVRDFITANVPADFAGIGALDQTRRKEFIREWRKTLADNGLLAVLW 60 Query 61 PTEYGGGGLSPMEQVVLAEEFARAGAPERAENDLLGIDLLGNTLIALGSEAQKRHFLPRI 120 P YGG GL+P+ QVVLAEEFARAG P END+ GI LLGNTL+ G+E QK FLPRI Sbjct 61 PKRYGGAGLTPLHQVVLAEEFARAGVPAGTENDMFGIQLLGNTLVVCGTEDQKNWFLPRI 120 Query 121 LSGEHRWCQGFSEPEAGSDLASVRTRGVLDGDEWVINGHKIWTSAGTTANWIFLLARTDP 180 LSG+ RWCQGFSEP+AGSDLAS+RTR VLDGDEWVING KIWTS G ANWIF L RTD Sbjct 121 LSGDDRWCQGFSEPDAGSDLASLRTRAVLDGDEWVINGSKIWTSVGHLANWIFALCRTDM 180 Query 181 SAAKHRGLSFLLVPMDQPGVVVRPIVNAAGHSSFSEVFLTDARTSAGNVVGRVGDGWSTA 240 A KHRG+SFLLVPMDQPGV VRPI N G S F+EVF TDART+A NVVG V GWS A Sbjct 181 DAPKHRGISFLLVPMDQPGVEVRPIKNIVGQSMFNEVFFTDARTAADNVVGEVNAGWSVA 240 Query 241 MTLLGFERGSHIATAAIDFERDLQRLCELARDRGLHTDPRVRDGLAWCYARVQIMRYRGY 300 MTLLGFERG+ + T AI F+ ++ RL ELA++RG DP +R+ LAWCY RV+IMR RGY Sbjct 241 MTLLGFERGTSVTTDAIRFQAEIDRLFELAKERGKTNDPHIREQLAWCYGRVEIMRCRGY 300 Query 301 RDLTLALTGRPPGAEAAITKVIWSEYFRRYTDLAVEILGLEALGPRGPGNGGARLVPEAG 360 + LT L G PG EAA+TK++WSE+F+R T+LA+EIL + L G G GA + G Sbjct 301 QALTRFLHGEYPGPEAAMTKILWSEFFQRETELAMEILETDVLTLSGTGTNGALATADVG 360 Query 361 TPNSPACWMDELLYARAATIYAGSSQIQRNVIGERLLGLPKEPR 404 TPNS W++ L ARAATIYAGSSQ+QRN+IGE+LLGLPKEPR Sbjct 361 TPNSSLAWVESALAARAATIYAGSSQVQRNIIGEKLLGLPKEPR 404 >gi|300785717|ref|YP_003766008.1| acyl-CoA dehydrogenase [Amycolatopsis mediterranei U32] gi|299795231|gb|ADJ45606.1| putative acyl-CoA dehydrogenase [Amycolatopsis mediterranei U32] gi|340527180|gb|AEK42385.1| acyl-CoA dehydrogenase FadE17 [Amycolatopsis mediterranei S699] Length=410 Score = 450 bits (1157), Expect = 2e-124, Method: Compositional matrix adjust. Identities = 221/406 (55%), Positives = 284/406 (70%), Gaps = 0/406 (0%) Query 1 VDVSYPPEAEAFRDRIREFVAEHLPPGWPGPGALPPHEREEFARHWRRALAGAGLVAVSW 60 +D+SYPPE + FR+ +R F+A ++P GW G GAL E + F WRR LA G +A +W Sbjct 1 MDLSYPPEVQGFREEVRAFIAANVPAGWRGLGALDTDEAKAFVEQWRRVLAARGYLAPAW 60 Query 61 PTEYGGGGLSPMEQVVLAEEFARAGAPERAENDLLGIDLLGNTLIALGSEAQKRHFLPRI 120 P EYGGGGL + QVVL EE A AG P D+ GI ++GN L+ G+E QKR+FLPRI Sbjct 61 PVEYGGGGLDRLRQVVLVEELAAAGLPASGSQDVFGIKMIGNLLLRHGTEEQKRYFLPRI 120 Query 121 LSGEHRWCQGFSEPEAGSDLASVRTRGVLDGDEWVINGHKIWTSAGTTANWIFLLARTDP 180 +SGE RWCQGFSEP AGSDLA++RTR VL G EWVI+G K+WTS +A+WIFLLARTDP Sbjct 121 ISGEDRWCQGFSEPGAGSDLAALRTRAVLTGGEWVIDGQKVWTSQARSADWIFLLARTDP 180 Query 181 SAAKHRGLSFLLVPMDQPGVVVRPIVNAAGHSSFSEVFLTDARTSAGNVVGRVGDGWSTA 240 +A +HRGL+ LLVP+DQPGV +RPI G + F+EVF T RT+ NVVG G+GW+ A Sbjct 181 AAVRHRGLTMLLVPLDQPGVDIRPITMITGDTGFNEVFFTGVRTAEANVVGEAGNGWTVA 240 Query 241 MTLLGFERGSHIATAAIDFERDLQRLCELARDRGLHTDPRVRDGLAWCYARVQIMRYRGY 300 M+LLG ERG AT I F ++ RL ELAR+RG+ DP VR LA CY+R +IMR+ G Sbjct 241 MSLLGLERGDEAATNPIMFRAEIDRLIELARERGVAGDPVVRQRLARCYSRAEIMRHLGN 300 Query 301 RDLTLALTGRPPGAEAAITKVIWSEYFRRYTDLAVEILGLEALGPRGPGNGGARLVPEAG 360 R LT L G P G EA+++K+ WSE+ R T+LA++ILG EA+ P G G + G Sbjct 301 RVLTRWLRGEPTGTEASVSKLYWSEHHRAVTELAMDILGPEAMVPTGRGPLRHYRTDDPG 360 Query 361 TPNSPACWMDELLYARAATIYAGSSQIQRNVIGERLLGLPKEPRPE 406 PNS A W L+A + TIYAG+S++QRN++ E LG+P+EPRP+ Sbjct 361 APNSTASWSTVWLHAVSGTIYAGTSEVQRNILAETALGMPREPRPD 406 >gi|297204633|ref|ZP_06922030.1| pimeloyl-CoA dehydrogenase, large subunit [Streptomyces sviceus ATCC 29083] gi|197710701|gb|EDY54735.1| pimeloyl-CoA dehydrogenase, large subunit [Streptomyces sviceus ATCC 29083] Length=408 Score = 427 bits (1099), Expect = 1e-117, Method: Compositional matrix adjust. Identities = 214/404 (53%), Positives = 275/404 (69%), Gaps = 0/404 (0%) Query 1 VDVSYPPEAEAFRDRIREFVAEHLPPGWPGPGALPPHEREEFARHWRRALAGAGLVAVSW 60 +D+SYPPE EAFR +R F+AE LPP W G GAL FAR WRR LA ++++W Sbjct 1 MDISYPPETEAFRTEVRAFLAETLPPDWTGIGALDEEAAWAFARDWRRLLAERRYLSLTW 60 Query 61 PTEYGGGGLSPMEQVVLAEEFARAGAPERAENDLLGIDLLGNTLIALGSEAQKRHFLPRI 120 P +YGG GL+ + QVVL EE A AG P D G+ +L NTL+ G++ QK HFLPRI Sbjct 61 PEQYGGRGLTKLHQVVLMEELALAGVPFGLPQDTFGVKMLANTLLRWGTDEQKAHFLPRI 120 Query 121 LSGEHRWCQGFSEPEAGSDLASVRTRGVLDGDEWVINGHKIWTSAGTTANWIFLLARTDP 180 SGE WCQG+SEP+AGSDLAS+RTR V DG+EWVI+G K+WTS ++WIF+LART+P Sbjct 121 PSGEDTWCQGYSEPDAGSDLASLRTRAVRDGEEWVIDGQKVWTSGAHHSDWIFVLARTNP 180 Query 181 SAAKHRGLSFLLVPMDQPGVVVRPIVNAAGHSSFSEVFLTDARTSAGNVVGRVGDGWSTA 240 A +HRG+SFLLVP+DQPGV VRP +G F+EVF ART A VVG V +GW+ A Sbjct 181 DAPRHRGISFLLVPLDQPGVEVRPFRMMSGQLHFNEVFFNGARTRADLVVGGVDNGWTVA 240 Query 241 MTLLGFERGSHIATAAIDFERDLQRLCELARDRGLHTDPRVRDGLAWCYARVQIMRYRGY 300 +LLG ERG AT I F+ +++RL ELAR G DP +R +AWC+++V+IMRY GY Sbjct 241 QSLLGVERGEEAATNPILFKAEVERLVELARLYGKDQDPVIRQRIAWCWSKVEIMRYLGY 300 Query 301 RDLTLALTGRPPGAEAAITKVIWSEYFRRYTDLAVEILGLEALGPRGPGNGGARLVPEAG 360 R LT L G PG E++I K+ WSEY + TDLA++I+GL P G + G Sbjct 301 RILTGWLKGAEPGPESSIAKLYWSEYHTKVTDLAMDIMGLHGQVPVGRPPLRTYRTDDPG 360 Query 361 TPNSPACWMDELLYARAATIYAGSSQIQRNVIGERLLGLPKEPR 404 NS A W L AR+ T+YAG+SQ+QRN++ E++LGLP+EPR Sbjct 361 AANSSASWSTTYLIARSGTLYAGTSQVQRNILAEKVLGLPREPR 404 >gi|111221937|ref|YP_712731.1| putative acyl-CoA dehydrogenase [Frankia alni ACN14a] gi|111149469|emb|CAJ61160.1| Putative Acyl-CoA dehydrogenase [Frankia alni ACN14a] Length=401 Score = 392 bits (1008), Expect = 4e-107, Method: Compositional matrix adjust. Identities = 206/398 (52%), Positives = 263/398 (67%), Gaps = 1/398 (0%) Query 8 EAEAFRDRIREFVAEHLPPGWPGPGALPPHEREEFARHWRRALAGAGLVAVSWPTEYGGG 67 + E FR R+R +AE+LP GW G GAL E+EEF WRR L GL+AV WP EYGG Sbjct 4 DGEMFRARVRSLLAENLPAGWSGIGALSDREQEEFRTRWRRLLHENGLLAVGWPIEYGGS 63 Query 68 GLSPMEQVVLAEEFARAGAPERAENDLLGIDLLGNTLIALGSEAQKRHFLPRILSGEHRW 127 GLSP EQ++LAEE AG P+ ND G+ +LG+TL+ G+E Q+R++LPRILS + W Sbjct 64 GLSPREQLILAEECTTAGVPQGGLNDNFGVQMLGSTLLRWGTEEQRRYYLPRILSQQDIW 123 Query 128 CQGFSEPEAGSDLASVRTRGVLDGDEWVINGHKIWTSAGTTANWIFLLARTDPSAAKHRG 187 CQGFSEPEAGSDLA +RTR L W+ING KIWTS G A IF+L RTD S HRG Sbjct 124 CQGFSEPEAGSDLAGIRTRAELVEGRWMINGQKIWTSYGHLATHIFVLCRTDSSVPPHRG 183 Query 188 LSFLLVPMDQPGVVVRPIVNAAGHSSFSEVFLTDARTSAGNVVGRVGDGWSTAMTLLGFE 247 +S LL +DQPG+ +RP+ G + F+EVF TDA A VVG V GW AM+LLGFE Sbjct 184 ISLLLCALDQPGIDLRPLRTLTGEAEFNEVFFTDAECPADAVVGPVDGGWPVAMSLLGFE 243 Query 248 RGSHIATAAIDFERDLQRLCELARDRGLHTDPRVRDGLAWCYARVQIMRYRGYRDLTLAL 307 RG +AT AI F +D +RL +A D TDP + + L RV+ +R G R + + Sbjct 244 RGEAVATLAIRFRKDWERLHRIAVDPEGPTDPVIVERLGRSRQRVEELRCLGLRAVDSWV 303 Query 308 TGRPPGAEAAITKVIWSEYFRRYTDLAVEILGLEALGPRGPGNGGARL-VPEAGTPNSPA 366 GR GAE+++ K+ WSE+ + T+LA+++LG++A+ G G EAGTPN+ Sbjct 304 AGRDIGAESSLHKLFWSEWIQETTELALDVLGMDAVTAGSDGLRGVSFPAAEAGTPNTAG 363 Query 367 CWMDELLYARAATIYAGSSQIQRNVIGERLLGLPKEPR 404 W D L ARAATIYAGSS+IQRN+I ER+LGLP+EPR Sbjct 364 TWADYFLRARAATIYAGSSEIQRNIIAERMLGLPREPR 401 >gi|111222878|ref|YP_713672.1| putative acyl-CoA dehydrogenase [Frankia alni ACN14a] gi|111150410|emb|CAJ62108.1| putative acyl-CoA dehydrogenase [Frankia alni ACN14a] Length=408 Score = 386 bits (991), Expect = 4e-105, Method: Compositional matrix adjust. Identities = 210/406 (52%), Positives = 260/406 (65%), Gaps = 3/406 (0%) Query 1 VDVSYPPEAEAFRDRIREFVAEHLPPGWPGPGAL-PPHEREEFARHWRRALAGAGLVAVS 59 +D YP E E FR +R +AE LPP WPG GAL EF WRR L GL+ V+ Sbjct 1 MDTRYPAEVEQFRAEVRAVLAEELPPDWPGTGALGDAAAVREFVTGWRRTLHRRGLLGVA 60 Query 60 WPTEYGGGGLSPMEQVVLAEEFARAGAPERAE-NDLLGIDLLGNTLIALGSEAQKRHFLP 118 WP E+GG GL+ + QVVL EE RAG P + D G +LGNTL+ G+EAQK LP Sbjct 61 WPVEHGGRGLTTLHQVVLVEELTRAGVPFGVQPQDSTGFKMLGNTLLRYGTEAQKATILP 120 Query 119 RILSGEHRWCQGFSEPEAGSDLASVRTRGVLDGDEWVINGHKIWTSAGTTANWIFLLART 178 +LSGE WCQGFSEP AGSDLA+ TR L EW I+G KIWTS + IF+LART Sbjct 121 GLLSGEQIWCQGFSEPNAGSDLAAAGTRARLVDGEWHIDGQKIWTSGAHRSTGIFVLART 180 Query 179 DPSAAKHRGLSFLLVPMDQPGVVVRPIVNAAGHSSFSEVFLTDARTSAGNVVGRVGDGWS 238 +P AAKHRGLSFLLVP+DQPGV VRPI + G F EVF TDAR A +VG+ GDGW Sbjct 181 EPEAAKHRGLSFLLVPLDQPGVEVRPIRHMTGGEDFCEVFFTDARCPADAIVGKPGDGWK 240 Query 239 TAMTLLGFERGSHIATAAIDFERDLQRLCELARDRGLHTDPRVRDGLAWCYARVQIMRYR 298 A TLL +ERG AT I F +L RL ELAR RG+ +P VR LA+ +RV++MR+ Sbjct 241 VASTLLTYERGEEAATNPILFAAELDRLVELARRRGVADEPSVRRRLAYFRSRVEVMRFL 300 Query 299 GYRDLTLALTGRPPGAEAAITKVIWSEYFRRYTDLAVEILGLEALGPRGPGNGGARLVPE 358 GYR L+ L G GA ++++K+ WSEY R T LA++I GL+ L G G + Sbjct 301 GYRILSDVLAGGELGAASSVSKLYWSEYHREVTQLALDIEGLDGLVLVGKGPSRPLRTDD 360 Query 359 AGT-PNSPACWMDELLYARAATIYAGSSQIQRNVIGERLLGLPKEP 403 G P S W + L ARA T+YAG+S++QRN++ ER+LGLP+EP Sbjct 361 PGADPESTTSWWEVSLNARAGTVYAGTSEVQRNILAERVLGLPREP 406 >gi|288915980|ref|ZP_06410362.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EUN1f] gi|288352609|gb|EFC86804.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EUN1f] Length=412 Score = 357 bits (915), Expect = 2e-96, Method: Compositional matrix adjust. Identities = 196/407 (49%), Positives = 249/407 (62%), Gaps = 2/407 (0%) Query 1 VDVSYPPEAEAFRDRIREFVAEHLPPGWPGPGALPPHEREEFARHWRRALAGAGLVAVSW 60 +D+ Y +A+RD +R + LP W G GAL ER F WR L +G+ A W Sbjct 1 MDLRYSAAEQAYRDEVRSTLRSLLPADWAGYGALGTEERARFDPWWRERLLESGMFAAGW 60 Query 61 PTEYGGGGLSPMEQVVLAEEFARAGAPER-AENDLLGIDLLGNTLIALGSEAQKRHFLPR 119 P EYGGGGLS +EQ ++AEE A AGAP+ ND G+ LLG TL+ GS Q+ +FLPR Sbjct 61 PAEYGGGGLSIIEQSIVAEELAEAGAPQYPTPNDTFGLQLLGPTLMHYGSPEQRDYFLPR 120 Query 120 ILSGEHRWCQGFSEPEAGSDLASVRTRGVLDGDEWVINGHKIWTSAGTTANWIFLLARTD 179 LSGE RW QG+SEPEAGSDL +VRT GD W++NG K+W +AGTTANWIF + RTD Sbjct 121 TLSGEIRWAQGYSEPEAGSDLFNVRTVAHRSGDTWIVNGQKVWQTAGTTANWIFTVVRTD 180 Query 180 PSAAKHRGLSFLLVPMDQPGVVVRPIVNAAGHSSFSEVFLTDARTSAGNVVGRVGDGWST 239 P +GLSFLL+P+DQ GV VR I N AG + +EVF DA A +VVG VG G + Sbjct 181 PEVKGAKGLSFLLIPIDQRGVTVRGIRNMAGETELAEVFFDDAVARADHVVGGVGQGATV 240 Query 240 AMTLLGFERGSHIATAAIDFERDLQRLCELARDRGLHTDPRVRDGLAWCYARVQIMRYRG 299 AM LLGFERG+ A+ +L+RL +L + G D V LA C A +R Sbjct 241 AMALLGFERGAGGLALAVSSRIELERLAKLIVESGRADDTSVTRRLARCRADAHAIRCLA 300 Query 300 YRDLTLALTGRPPGAEAAITKVIWSEYFRRYTDLAVEILGLEALGPRGPGNGGAR-LVPE 358 R L + PGAE+++TK S Y +R T+LA+++LG +A+ GP AR P+ Sbjct 301 LRTLAAVSSKAVPGAESSVTKWFVSRYRQRVTELALDVLGPDAVALVGPDTVAARGPQPK 360 Query 359 AGTPNSPACWMDELLYARAATIYAGSSQIQRNVIGERLLGLPKEPRP 405 P S W+ L+AR T+Y GS QIQRN IGERLLGLP+E RP Sbjct 361 GVDPTSRTAWIQAALHARPITVYGGSLQIQRNTIGERLLGLPREQRP 407 >gi|269127548|ref|YP_003300918.1| acyl-CoA dehydrogenase domain-containing protein [Thermomonospora curvata DSM 43183] gi|268312506|gb|ACY98880.1| acyl-CoA dehydrogenase domain protein [Thermomonospora curvata DSM 43183] Length=393 Score = 339 bits (869), Expect = 7e-91, Method: Compositional matrix adjust. Identities = 190/402 (48%), Positives = 249/402 (62%), Gaps = 21/402 (5%) Query 10 EAFRDRIREFVAEHLP------PGWPGPGALPPHEREEFARHWRRALAGAGLVAVSWPTE 63 EAFR +R ++ E+L G GPG HE E W R LA AG + WP E Sbjct 7 EAFRAEVRAWLEENLSGEFAAARGLGGPGR--EHEGHEIRHAWERHLAKAGWTCLGWPVE 64 Query 64 YGGGGLSPMEQVVLAEEFARAGAPERAENDLLGIDLLGNTLIALGSEAQKRHFLPRILSG 123 YGG + +QVV EE+ARAGAP R + +G L+G T+I G+E QKR FLP I G Sbjct 65 YGGRNATMEQQVVFFEEYARAGAPHRVGH--IGEGLIGPTIIDFGTEEQKRRFLPPIRDG 122 Query 124 EHRWCQGFSEPEAGSDLASVRTRGVLDGDEWVINGHKIWTSAGTTANWIFLLARTDPSAA 183 E WCQG+SEP AGSDLA+V+TR L GDEWVI+G K+WTS A+W F+L RT+P + Sbjct 123 EELWCQGYSEPNAGSDLANVQTRAELVGDEWVIHGQKVWTSLAHVADWCFVLCRTEPGST 182 Query 184 KHRGLSFLLVPMDQPGVVVRPIVNAAGHSSFSEVFLTDARTSAGNVVGRVGDGWSTAMTL 243 +HRGLS+LLVPM QPGV VRPIV A G S F+EVF ART+ N++G GDGW AM Sbjct 183 RHRGLSYLLVPMRQPGVEVRPIVQATGTSEFNEVFFDGARTAKENILGAPGDGWRVAMAT 242 Query 244 LGFERGSHIATAAIDFERDLQRLCELARDRGLHTDPRVRDGLAWCYARVQIMRYRGYRDL 303 LG+ERG+ + F R+L+ + +A++ G + DP +RD LA + ++IMR+ R + Sbjct 243 LGYERGASTLGQQLLFRRELEAIIAVAKETGANRDPVLRDRLARAWIELEIMRFNALRTM 302 Query 304 TLALTGRPPGAEAAITKVIWSEYFRRYTDLAVEILGLEALGPRGPGNGGARLVPEAGTPN 363 +L PG E +I K+ WSE+ RR +LAV++ G L P G+ + +A Sbjct 303 R-SLAAGEPGPEVSIAKLYWSEWHRRLGELAVDVQGAAGLLTE-PAPVGSYELTDA---- 356 Query 364 SPACWMDELLYARAATIYAGSSQIQRNVIGERLLGLPKEPRP 405 L++RA TIYAGSS+IQRN+I ER LGLP+EPRP Sbjct 357 -----QRLFLFSRADTIYAGSSEIQRNIIAERTLGLPREPRP 393 >gi|297204615|ref|ZP_06922012.1| pimeloyl-CoA dehydrogenase, large subunit [Streptomyces sviceus ATCC 29083] gi|297148736|gb|EFH29097.1| pimeloyl-CoA dehydrogenase, large subunit [Streptomyces sviceus ATCC 29083] Length=392 Score = 336 bits (861), Expect = 5e-90, Method: Compositional matrix adjust. Identities = 190/408 (47%), Positives = 249/408 (62%), Gaps = 19/408 (4%) Query 1 VDVSYPPEAEAFRDRIREFVAEHLPPGWP---GPGALPPHEREEFARHWRRALAGAGLVA 57 +++ + PE FRD +R+++++HL + G G E W R L+ G + Sbjct 1 MELDFGPEVRDFRDEVRDWLSDHLVGEFAEHRGVGGPTDGAAWEVRLAWDRELSAGGWLG 60 Query 58 VSWPTEYGGGGLSPMEQVVLAEEFARAGAPERAENDLLGIDLLGNTLIALGSEAQKRHFL 117 V WP EYGG GL +E++V E+AR AP RA + L DLLG L+ +GSE QK+ FL Sbjct 61 VGWPREYGGRGLGLLEEIVFEYEYARVNAPYRATVNAL--DLLGPMLLKMGSETQKKRFL 118 Query 118 PRILSGEHRWCQGFSEPEAGSDLASVRTRGVLDGDEWVINGHKIWTSAGTTANWIFLLAR 177 P IL+ E W QGFSEP AGSDLASVRTR DGDEWV++G K+WTS G A+W+++L R Sbjct 119 PPILAVEELWGQGFSEPGAGSDLASVRTRAERDGDEWVVSGQKVWTSFGVHADWLYVLTR 178 Query 178 TDPSAAKHRGLSFLLVPMDQPGVVVRPIVNAAGHSSFSEVFLTDARTSAGNVVGRVGDGW 237 TDP + +H+GLS LLVP DQPGV +RPI N AG F+EVFL+DARTSA VVG VG GW Sbjct 179 TDPQSVRHKGLSLLLVPTDQPGVEIRPIRNLAGQDEFAEVFLSDARTSADMVVGEVGQGW 238 Query 238 STAMTLLGFERGSHIATAAIDFERDLQRLCELARDRGLHTDPRVRDGLAWCYARVQIMRY 297 TAM LG ERG+ + + FER+ + L +LAR+RG DP +R + + V+IMR Sbjct 239 RTAMATLGIERGTTLLPQQLTFEREAEALIDLARERGALDDPMLRRRIVDAWISVRIMRT 298 Query 298 RGYRDLTLALTGRPPGAEAAITKVIWSEYFRRYTDLAVEILGLEALGPRGPGNGGARLVP 357 R + GR PGA+A K+ S ++ LA E+ GP G ++V Sbjct 299 TNLRTIAELTAGRTPGAQATTAKLYASTRHQQLGQLATEL-----AGPAG------QIVG 347 Query 358 EAGTPNSPACWMDELLYARAATIYAGSSQIQRNVIGERLLGLPKEPRP 405 E + L A A TIY GSS+IQRN+IGE++LGLPKEPRP Sbjct 348 EDYALDRR---QRSFLLALAETIYGGSSEIQRNIIGEQVLGLPKEPRP 392 >gi|339628107|ref|YP_004719750.1| acyl-CoA dehydrogenase [Sulfobacillus acidophilus TPY] gi|339285896|gb|AEJ40007.1| acyl-CoA dehydrogenase domain protein [Sulfobacillus acidophilus TPY] Length=399 Score = 333 bits (854), Expect = 3e-89, Method: Compositional matrix adjust. Identities = 190/415 (46%), Positives = 255/415 (62%), Gaps = 26/415 (6%) Query 1 VDVSYPPEAEAFRDRIREFVAEHLPPGW---PGPGALPPHEREEFARHWRRALAGAGLVA 57 +D+ + E EAFR+R+R F+ E LP GW P P E+ E W R + GL Sbjct 1 MDIRFSAEHEAFRERVRSFLTEVLPEGWGTSKHPYPRNPQEQAEVGLCWERTVYAHGLAG 60 Query 58 VSWPTEYGGGGLSPMEQVVLAEEFARAGAPERAENDLLGIDLLGNTLIALGSEAQKRHFL 117 +SWP EYGG GL+ +E+V+ +EE ARA AP A + LG LLG TL+ G+E QKR F+ Sbjct 61 LSWPKEYGGQGLTWVEEVIFSEECARANAP--AGVNGLGKGLLGPTLLVEGTEDQKRRFI 118 Query 118 PRILSGEHRWCQGFSEPEAGSDLASVRTRGVLDGDEWVINGHKIWTSAGTTANWIFLLAR 177 P +L+G+ WCQG+SEP AGSDLAS+ TR VLDGDEWVI G KIWTS A+W F+LAR Sbjct 119 PPLLAGDEIWCQGYSEPNAGSDLASLTTRAVLDGDEWVITGQKIWTSYAHLADWCFVLAR 178 Query 178 TDPSAAKHRGLSFLLVPMDQPGVVVRPIVNAAGHSSFSEVFLTDARTSAGNVVGRVGDGW 237 TD SA KHRG++FLLVPM Q GV V P+V G + F+ V +ART+ NVVG V DGW Sbjct 179 TDASAPKHRGITFLLVPMHQVGVTVEPLVQLTGEAHFNSVTFNEARTARENVVGAVNDGW 238 Query 238 STAMTLLGFERGSHIATAAIDFERDLQRLCELARD-RG----LHTDPRVRDGLAWCYARV 292 A T+L FERG+ I + R+ L + AR RG + D R ++ + Sbjct 239 RIANTILSFERGTTIVGRHAHYRREFDTLLDAARQSRGENGPIADDAHYRQRFMELWSEI 298 Query 293 QIMRYRGYRDLTLALTGRPPGAEAAITKVIWSEYFRRYTDLAVEILGLEALGPRGPGNGG 352 +I+R+ GY+ +T T G EA++ K+ +SE +R +LA+++L GG Sbjct 299 EILRFHGYQVITQLQTKSRLGPEASMLKLYYSEMHKRLGELAMDVL------------GG 346 Query 353 ARLVPEAGTPNSPAC--WMDELLYARAATIYAGSSQIQRNVIGERLLGLPKEPRP 405 A +P AG +S A L++RA TI+AG+S+IQ+NVI ER+LGLPK+ RP Sbjct 347 A--MPFAGGLDSLAGGDLHRAFLWSRAETIFAGTSEIQKNVIAERVLGLPKDGRP 399 >gi|311744277|ref|ZP_07718081.1| acyl-CoA dehydrogenase [Aeromicrobium marinum DSM 15272] gi|311312450|gb|EFQ82363.1| acyl-CoA dehydrogenase [Aeromicrobium marinum DSM 15272] Length=397 Score = 327 bits (837), Expect = 3e-87, Method: Compositional matrix adjust. Identities = 187/402 (47%), Positives = 247/402 (62%), Gaps = 30/402 (7%) Query 11 AFRDRIREFVAEHLPPGWP------GPGALPPHEREEFARHWRRALAGAGLVAVSWPTEY 64 AFR IR+++AEHL W GPG HE + R W R LA G + WP E+ Sbjct 17 AFRTEIRDWLAEHLTGEWAALKGLGGPG--REHEAVDARRAWNRLLAEHGWTCLGWPVEH 74 Query 65 GGGGLSPMEQVVLAEEFARAGAPERAENDLLGIDLLGNTLIALGSEAQKRHFLPRILSGE 124 GG GL P +QV+ EE+ARA AP+ + LG LLG TLI G+ Q++ FLP I + + Sbjct 75 GGRGLGPAQQVIFHEEYARADAPQTVNH--LGEQLLGPTLIEFGTPEQQQRFLPGIRAVD 132 Query 125 HRWCQGFSEPEAGSDLASVRTRGVLD-GD-EWVINGHKIWTSAGTTANWIFLLARTDPSA 182 WCQG+SEP AGSDLA+V TR VLD GD EWV++G K+WTS ++W+F+LAR++P + Sbjct 133 ELWCQGYSEPGAGSDLAAVSTRAVLDEGDGEWVLDGQKVWTSLAHESDWMFVLARSEPGS 192 Query 183 AKHRGLSFLLVPMDQPGVVVRPIVNAAGHSSFSEVFLTDARTSAGNVVGRVGDGWSTAMT 242 ++H GLSFLL+P+DQ GV +RPI G S F+EVFLT ART+A +VG GDGW AM Sbjct 193 SRHHGLSFLLLPLDQDGVEIRPIEQITGGSEFNEVFLTGARTAASMIVGAPGDGWRVAMA 252 Query 243 LLGFERGSHIATAAIDFERDLQRLCELARDRGLHTDPRVRDGLAWCYARVQIMRYRGYRD 302 LLGFERG + + FER+LQ L LARD G DP +RD LA A ++MR R Sbjct 253 LLGFERGVSVLGQQVGFERELQDLLALARDNGALDDPVLRDRLARHSAEFEMMRVNAVRS 312 Query 303 LTLALTGRPPGAEAAITKVIWSEYFRRYTDLAVEILGLEALGPRGPGNGGARLVPEAGTP 362 LT A PGA+ + K++W+ + RR +LA+E+LG +L +G Sbjct 313 LTAA----TPGAD-NVAKLVWAGWHRRLGELAMEVLGAGSL-------------TTSGAT 354 Query 363 NSPACWMDELLYARAATIYAGSSQIQRNVIGERLLGLPKEPR 404 W L++RA T+Y GS +IQR ++ ER+LGLPKE R Sbjct 355 YDLDRWQRLFLFSRADTLYGGSDEIQRTILAERVLGLPKEAR 396 >gi|300785755|ref|YP_003766046.1| acyl-CoA dehydrogenase [Amycolatopsis mediterranei U32] gi|299795269|gb|ADJ45644.1| acyl-CoA dehydrogenase [Amycolatopsis mediterranei U32] gi|340527218|gb|AEK42423.1| acyl-CoA dehydrogenase [Amycolatopsis mediterranei S699] Length=392 Score = 323 bits (827), Expect = 5e-86, Method: Compositional matrix adjust. Identities = 189/408 (47%), Positives = 238/408 (59%), Gaps = 19/408 (4%) Query 1 VDVSYPPEAEAFRDRIREFVAEHLPPGWP---GPGALPPHEREEFARHWRRALAGAGLVA 57 +++ + P FR+ R ++AEHL + G G E E W R LA G + Sbjct 1 MELDFGPAVADFREEARTWLAEHLVGEFAAHRGIGGPADSEAWEVRLAWDRELAAGGWLG 60 Query 58 VSWPTEYGGGGLSPMEQVVLAEEFARAGAPERAENDLLGIDLLGNTLIALGSEAQKRHFL 117 +SWP EYGG GL+ +E+VV E+AR+GAP RA G+DL G L+ALG+ QKR FL Sbjct 61 LSWPVEYGGRGLTLLEEVVFNYEYARSGAPYRATTS--GLDLFGPMLLALGTPEQKRRFL 118 Query 118 PRILSGEHRWCQGFSEPEAGSDLASVRTRGVLDGDEWVINGHKIWTSAGTTANWIFLLAR 177 P IL E W QGFSEP AGSDLAS+R R LDG+EWVI+G K+WT+ TA+W+++L R Sbjct 119 PPILRVEQLWGQGFSEPGAGSDLASLRCRAELDGNEWVIDGQKVWTTMAHTADWLYVLVR 178 Query 178 TDPSAAKHRGLSFLLVPMDQPGVVVRPIVNAAGHSSFSEVFLTDARTSAGNVVGRVGDGW 237 TDP + +HRGL+ LLVP DQPGV VR I N AG F+EVF T ARTSA VVG VG GW Sbjct 179 TDPDSRRHRGLTMLLVPRDQPGVDVRVIRNLAGQDEFAEVFFTGARTSADLVVGEVGQGW 238 Query 238 STAMTLLGFERGSHIATAAIDFERDLQRLCELARDRGLHTDPRVRDGLAWCYARVQIMRY 297 TAM LG ERG + + FER++ L AR+ G RD + + V++MR Sbjct 239 RTAMGTLGIERGVTLLPQQLSFEREVADLIAAAREAGDAVPASTRDRIVQAWMSVRVMRT 298 Query 298 RGYRDLTLALTGRPPGAEAAITKVIWSEYFRRYTDLAVEILGLEALGPRGPGNGGARLVP 357 R L L GR PG +A I K+ S +R LA E+ GP G Sbjct 299 TNLRTLGEVLAGRTPGPQAGIAKLYASTSHQRMGHLAAEV-----AGPAG---------Q 344 Query 358 EAGTPNSPACWMDELLYARAATIYAGSSQIQRNVIGERLLGLPKEPRP 405 AG + L + A TIY GSS+IQR +IGE+LLGLPKEPRP Sbjct 345 LAGADYALDVRQRTFLLSLAETIYGGSSEIQRTIIGEQLLGLPKEPRP 392 >gi|302528334|ref|ZP_07280676.1| pimeloyl-CoA dehydrogenase, large subunit [Streptomyces sp. AA4] gi|302437229|gb|EFL09045.1| pimeloyl-CoA dehydrogenase, large subunit [Streptomyces sp. AA4] Length=392 Score = 322 bits (825), Expect = 7e-86, Method: Compositional matrix adjust. Identities = 183/411 (45%), Positives = 243/411 (60%), Gaps = 25/411 (6%) Query 1 VDVSYPPEAEAFRDRIREFVAEHLP------PGWPGPGALPPHEREEFARHWRRALAGAG 54 +D+ Y PE E FR +RE++A+HL G G G HE + + W + LA G Sbjct 1 MDLRYTPEDEQFRAEVREWLADHLAGEFAALKGLGGSGR--EHEAPQERQAWNQHLAAHG 58 Query 55 LVAVSWPTEYGGGGLSPMEQVVLAEEFARAGAPERAENDLLGIDLLGNTLIALGSEAQKR 114 + WP E+GG GLS + QV+ EE+AR+ AP R + LG +LLG TLIA G++ Q+R Sbjct 59 WTCLGWPVEHGGRGLSLLRQVIFHEEYARSNAPARVNH--LGEELLGPTLIAHGTDEQRR 116 Query 115 HFLPRILSGEHRWCQGFSEPEAGSDLASVRTRGVLDGDEWVINGHKIWTSAGTTANWIFL 174 FLP I+ WCQG+SEP AGSDLA VRTR L+G EWVI+G KIWTS A W F Sbjct 117 RFLPGIVGVTELWCQGYSEPGAGSDLAGVRTRARLEGGEWVIDGQKIWTSLAQHAQWCFA 176 Query 175 LARTDPSAAKHRGLSFLLVPMDQPGVVVRPIVNAAGHSSFSEVFLTDARTSAGNVVGRVG 234 + RT+P + +H GLS++LVPMDQPGV VRPI G S F+EVF ARTS VVG G Sbjct 177 VVRTEPGSRRHAGLSYVLVPMDQPGVEVRPIRQLTGTSEFNEVFFDGARTSESLVVGAPG 236 Query 235 DGWSTAMTLLGFERGSHIATAAIDFERDLQRLCELARDRGLHTDPRVRDGLAWCYARVQI 294 DGW AM LGFERG + F R+L + AR+ G + DP +RD LA +++ Sbjct 237 DGWRVAMATLGFERGVSTIGQQVGFARELAGVVAAARENGRYDDPVIRDRLARASVGLEV 296 Query 295 MRYRGYRDLTLALTGRPPGAEAAITKVIWSEYFRRYTDLAVEILGLEALGPRGPGNGGAR 354 +R R L+ G G EA+++K++W+ + R +LA+++ G AL G A+ Sbjct 297 LRVHALRTLSAYEAG-SQGPEASVSKLLWARWHRELGELAMDVRGGSALTAAGSYELDAQ 355 Query 355 LVPEAGTPNSPACWMDELLYARAATIYAGSSQIQRNVIGERLLGLPKEPRP 405 L++RA TIY GS +IQRN+I ER+LGLP+EPRP Sbjct 356 --------------QTLFLFSRADTIYGGSDEIQRNIIAERVLGLPREPRP 392 >gi|256390567|ref|YP_003112131.1| acyl-CoA dehydrogenase domain-containing protein [Catenulispora acidiphila DSM 44928] gi|256356793|gb|ACU70290.1| acyl-CoA dehydrogenase domain protein [Catenulispora acidiphila DSM 44928] Length=400 Score = 321 bits (822), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 189/418 (46%), Positives = 240/418 (58%), Gaps = 33/418 (7%) Query 1 VDVSYPPEAEAFRDRIREFVAEHLP------PGWPGPGALPPHEREEFARHWRRALAGAG 54 +D++Y E EAFR +R ++ +HL G GPG HE + W R LA G Sbjct 1 MDLTYTAEDEAFRAELRAWLHDHLTGEFAAAKGLGGPG--REHEAFDVRVAWDRHLAAHG 58 Query 55 LVAVSWPTEYGGGGLSPMEQVVLAEEFARAGAPERAENDLLGIDLLGNTLIALGSEAQKR 114 + WP EYGG +QV+ EE+ARA AP R + +G LLG TLIA G+E QK+ Sbjct 59 WTCLDWPKEYGGRAAGVAQQVIFHEEYARANAPIRVSH--IGEQLLGPTLIAFGTEEQKQ 116 Query 115 HFLPRILSGEHRWCQGFSEPEAGSDLASVRTRGVL--------DGDEWVINGHKIWTSAG 166 FLP I WCQG+SEP+AGSDLA+V+T VL G EW++NG K+WTS Sbjct 117 RFLPGIRDVTELWCQGYSEPDAGSDLANVKTTAVLAEPQSEAQGGGEWILNGQKVWTSLA 176 Query 167 TTANWIFLLARTDPSAAKHRGLSFLLVPMDQPGVVVRPIVNAAGHSSFSEVFLTDARTSA 226 A+W F++ARTDP A KHRGLS+LLVPM QPGV VRPI+ S F+EV+ TDART+A Sbjct 177 HLADWCFVVARTDPGAPKHRGLSYLLVPMKQPGVEVRPILQLTKTSEFNEVYFTDARTAA 236 Query 227 GNVVGRVGDGWSTAMTLLGFERGSHIATAAIDFERDLQRLCELARDRGLHTDPRVRDGLA 286 NVVG V DGW AM LGFERG I F R+L + LAR DP + D L Sbjct 237 TNVVGGVHDGWRVAMATLGFERGVSTLGQQIGFRRELDGVIALARQTTAIDDPLILDRLT 296 Query 287 WCYARVQIMRYRGYRDLTLALTGRPPGAEAAITKVIWSEYFRRYTDLAVEILGLEALGPR 346 + ++R R +T L PGAEA+I K+ W+ + R +LA+++ LG Sbjct 297 RAALGLDVLRLNALRSMT-GLADGTPGAEASIAKLAWARWHRDLGELAMDV-----LGAA 350 Query 347 GPGNGGARLVPEAGTPNSPACWMDELLYARAATIYAGSSQIQRNVIGERLLGLPKEPR 404 G G + E W L++RA TIY GS +IQRNVI ER+LGLPKEPR Sbjct 351 GTVTGADYDLDE---------WQRLWLFSRADTIYGGSDEIQRNVIAERVLGLPKEPR 399 >gi|269836562|ref|YP_003318790.1| acyl-CoA dehydrogenase domain-containing protein [Sphaerobacter thermophilus DSM 20745] gi|269785825|gb|ACZ37968.1| acyl-CoA dehydrogenase domain protein [Sphaerobacter thermophilus DSM 20745] Length=417 Score = 320 bits (819), Expect = 4e-85, Method: Compositional matrix adjust. Identities = 183/413 (45%), Positives = 241/413 (59%), Gaps = 17/413 (4%) Query 1 VDVSYPPEAEAFRDRIREFVAEHLPPGWPGPGALPPHEREEFARHWRRALAGAGLVAVSW 60 +D+ Y E E FR R+R ++ E+LP P E E R W RA+ AG + + W Sbjct 1 MDLFYTQEDEEFRRRVRAWLEENLPK--------EPLETLEQQRAWHRAVYEAGFLGMGW 52 Query 61 PTEYGGGGLSPMEQVVLAEEFARAGAPERAENDLLGIDLLGNTLIALGSEAQKRHFLPRI 120 P EYGG PMEQ ++ EE AR AP + LGI ++G TLI G+EAQK+ FL I Sbjct 53 PVEYGGRAARPMEQAIVGEEMARVQAPPTL--NPLGIAIVGPTLIHHGTEAQKKRFLRNI 110 Query 121 LSGEHRWCQGFSEPEAGSDLASVRTRGVLDGDEWVINGHKIWTSAGTTANWIFLLARTDP 180 L+ + WCQ FSEP AGSDLAS+RTR VL+GDE+VING K+WTS A+W LLARTDP Sbjct 111 LTADEIWCQLFSEPNAGSDLASLRTRAVLEGDEFVINGQKVWTSGAHRADWGLLLARTDP 170 Query 181 SAAKHRGLSFLLVPMDQPGVVVRPIVNAAGHSSFSEVFLTDARTSAGNVVGRVGDGWSTA 240 A KH G+S +LV M PGV VRP+ G + FSEVF + R A N+VG + GW A Sbjct 171 DAPKHLGISCILVDMHSPGVEVRPLTQINGSNEFSEVFFHNVRVPAENLVGELNAGWQIA 230 Query 241 MTLLGFERG----SHIATAAIDFERDLQRLCELARD-RGLHTDPRVRDGLAWCYARVQIM 295 T L +ERG S ++ F R ++ EL RD + DP VR L YA ++++ Sbjct 231 QTTLSYERGGNTLSRVSRYMAVFNRLVEAASELRRDGKRAIDDPVVRQKLGQMYAEIEVL 290 Query 296 RYRGYRDLTLALTGRPPGAEAAITKVIWSEYFRRYTDLAVEILGLEALGPRGPGNGGARL 355 RY R L+ G PG E++ITK+ +SE +R+ + +ILG G G Sbjct 291 RYGSLRILSRLEKGIRPGPESSITKLYYSEMEKRHYEFIFDILG--PYGQLIEGVPAEYA 348 Query 356 VPEAGTPNSPACWMDELLYARAATIYAGSSQIQRNVIGERLLGLPKEPRPEVL 408 + E P W Y+RA TI+AGSS+IQ+N++GER+LGLPKE R + L Sbjct 349 LKEGTAYGEPGSWAYHFAYSRAGTIFAGSSEIQKNILGERVLGLPKEVRADRL 401 >gi|271963623|ref|YP_003337819.1| acyl-CoA dehydrogenase domain-containing protein [Streptosporangium roseum DSM 43021] gi|270506798|gb|ACZ85076.1| acyl-CoA dehydrogenase domain-containing protein [Streptosporangium roseum DSM 43021] Length=381 Score = 318 bits (815), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 183/396 (47%), Positives = 232/396 (59%), Gaps = 24/396 (6%) Query 12 FRDRIREFVAEHLP------PGWPGPGALPPHEREEFARHWRRALAGAGLVAVSWPTEYG 65 R+ IR ++ EHL G GPG HE + W R L AG + WP EYG Sbjct 3 LREEIRSWLEEHLSGEFSGARGLGGPGR--EHEGHDIRLAWERRLGEAGWTCLGWPGEYG 60 Query 66 GGGLSPMEQVVLAEEFARAGAPERAENDLLGIDLLGNTLIALGSEAQKRHFLPRILSGEH 125 G + +QV EE+ARA AP R + +G L+G T+I G+E Q+R FLP I GE Sbjct 61 GRDATLEDQVAFHEEYARAAAPARVGH--IGEGLIGPTIIDHGTEEQRRRFLPPIRRGEE 118 Query 126 RWCQGFSEPEAGSDLASVRTRGVLDGDEWVINGHKIWTSAGTTANWIFLLARTDPSAAKH 185 WCQG+SEP AGSDLA V+TR L EWVI G K+WTS A+W F++ART+P + +H Sbjct 119 LWCQGYSEPGAGSDLAGVQTRARLQDGEWVITGQKVWTSLAHVADWCFVIARTEPGSQRH 178 Query 186 RGLSFLLVPMDQPGVVVRPIVNAAGHSSFSEVFLTDARTSAGNVVGRVGDGWSTAMTLLG 245 RGLS+LLVPMDQPGV VRPIV G S F+EVF ART+A NV+G G+GW AM LG Sbjct 179 RGLSYLLVPMDQPGVEVRPIVQMTGTSEFNEVFFDGARTAAANVLGAPGEGWRVAMATLG 238 Query 246 FERGSHIATAAIDFERDLQRLCELARDRGLHTDPRVRDGLAWCYARVQIMRYRGYRDLTL 305 +ERG+ I F+R+ ++ E AR G DP +RD L + +QIMR R +T Sbjct 239 YERGASTLGQQIGFQREYAKVAETARRTGAARDPVLRDRLVQSWLELQIMRLNALRTMT- 297 Query 306 ALTGRPPGAEAAITKVIWSEYFRRYTDLAVEILGLEALGPRGPGNGGARLVPEAGTPNSP 365 +L+ PG E +I K+ WSE+ RR +LA + G E L GP P Sbjct 298 SLSAGEPGPEVSIGKLYWSEWHRRLGELAQAVQGREGLVADGP-------------PYEL 344 Query 366 ACWMDELLYARAATIYAGSSQIQRNVIGERLLGLPK 401 L++RA TIYAGSS+IQRN+I ER LGLPK Sbjct 345 NDLQRLYLFSRADTIYAGSSEIQRNIIAERTLGLPK 380 >gi|111021568|ref|YP_704540.1| acyl-CoA dehydrogenase [Rhodococcus jostii RHA1] gi|110821098|gb|ABG96382.1| acyl-CoA dehydrogenase [Rhodococcus jostii RHA1] Length=426 Score = 317 bits (813), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 185/418 (45%), Positives = 246/418 (59%), Gaps = 25/418 (5%) Query 1 VDVSYPPEA----EAFRDRIREFVAEHLP------PGWPGPGALPPHEREEFARHWRRAL 50 VD S P+ + F +R ++ ++L G GPG+ HE E W R L Sbjct 21 VDQSESPDGLITDDDFAQTVRTWLNDNLTGDFARLKGKGGPGS--EHEFFEERLAWDRHL 78 Query 51 AGAGLVAVSWPTEYGGGGLSPMEQVVLAEEFARAGAPERAENDLLGIDLLGNTLIALGSE 110 A AG + WP E+GG G + +QVV +E+A++GAP R + +G +LLG TLIA G+E Sbjct 79 AAAGWTCLGWPKEHGGRGATLAQQVVFHQEYAKSGAPARVSH--VGEELLGPTLIAFGTE 136 Query 111 AQKRHFLPRILSGEHRWCQGFSEPEAGSDLASVRTRGVLDGDEWVINGHKIWTSAGTTAN 170 QKR FLP I + W QG+SEP AGSDLA+V T LDGD+WVING K+WTS A Sbjct 137 EQKRRFLPGINTVTELWAQGYSEPGAGSDLANVSTTARLDGDKWVINGQKVWTSLAHVAQ 196 Query 171 WIFLLARTDPSAAKHRGLSFLLVPMDQPGVVVRPIVNAAGHSSFSEVFLTDARTSAGNVV 230 W F+L RT+P + +H+GLSFLLVP+DQPGV VRPI G S F+EVF DA T A VV Sbjct 197 WAFVLCRTEPGSKRHQGLSFLLVPLDQPGVTVRPIQQLTGTSEFNEVFFDDAVTDADLVV 256 Query 231 GRVGDGWSTAMTLLGFERGSHIATAAIDFERDLQRLCELARDRGLHTDPRVRDGLAWCYA 290 G GDGW AM LL FERG I F R+LQ + +LA+ G TDP +R+ +A + Sbjct 257 GEPGDGWRVAMGLLTFERGVSTLGQQIGFARELQGVVDLAKANGAATDPNIREKIARAWV 316 Query 291 RVQIMRYRGYRDLTLALTGRPPGAEAAITKVIWSEYFRRYTDLAVEILGLEA-LGPRGPG 349 +++MR R L A+ GAEA++ K++W+ + R LA+E+ G + L P P Sbjct 317 GLRVMRAHALRTLE-AVDAGTSGAEASVAKLLWANWHRDLGQLAMEVQGAASLLAPADPA 375 Query 350 NGGARLVPEAGTPNSPAC--WMDELLYARAATIYAGSSQIQRNVIGERLLGLPKEPRP 405 + + P W L+ RA TIY GS++IQRN+I ER+LGLP+E RP Sbjct 376 S-------DVTDPEHLELGDWQRLFLFTRADTIYGGSNEIQRNIISERVLGLPREARP 426 >gi|226363951|ref|YP_002781733.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4] gi|226242440|dbj|BAH52788.1| putative acyl-CoA dehydrogenase [Rhodococcus opacus B4] Length=406 Score = 315 bits (806), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 185/416 (45%), Positives = 246/416 (60%), Gaps = 21/416 (5%) Query 1 VDVSYPPEA----EAFRDRIREFVAEHLP------PGWPGPGALPPHEREEFARHWRRAL 50 +D S P+ + F + +R ++ ++L G GPG+ HE E W R L Sbjct 1 MDQSESPDGLITDDDFAESVRTWLNDNLTGDFARLKGKGGPGS--EHEFFEERLAWDRHL 58 Query 51 AGAGLVAVSWPTEYGGGGLSPMEQVVLAEEFARAGAPERAENDLLGIDLLGNTLIALGSE 110 A AG + WP EYGG G + +QVV +E+A+AGAP R + +G +LLG TLIA G+E Sbjct 59 AAAGWTCLGWPKEYGGRGATLAQQVVFHQEYAKAGAPARVSH--VGEELLGPTLIAFGTE 116 Query 111 AQKRHFLPRILSGEHRWCQGFSEPEAGSDLASVRTRGVLDGDEWVINGHKIWTSAGTTAN 170 QKR FLP I + W QG+SEP AGSDLA+V T DGD+WVING K+WTS A Sbjct 117 EQKRRFLPGINTVSELWAQGYSEPGAGSDLANVATTARRDGDKWVINGQKVWTSLAHVAQ 176 Query 171 WIFLLARTDPSAAKHRGLSFLLVPMDQPGVVVRPIVNAAGHSSFSEVFLTDARTSAGNVV 230 W F+L RT+P + +H+GLSFLLVP+DQPGV VRPI G S F+EVF DA T A VV Sbjct 177 WAFVLCRTEPGSKRHQGLSFLLVPLDQPGVTVRPIQQLTGTSEFNEVFFDDAVTDADLVV 236 Query 231 GRVGDGWSTAMTLLGFERGSHIATAAIDFERDLQRLCELARDRGLHTDPRVRDGLAWCYA 290 G GDGW AM LL FERG I F R+LQ + +LA+ G +DP +R+ +A + Sbjct 237 GEPGDGWRVAMGLLTFERGVSTLGQQIGFARELQGVVDLAKATGAASDPNIREKIARAWV 296 Query 291 RVQIMRYRGYRDLTLALTGRPPGAEAAITKVIWSEYFRRYTDLAVEILGLEA-LGPRGPG 349 +++MR R L A+ G EA++ K++W+ + R LA+E+ G + L P P Sbjct 297 GLRVMRAHALRTLE-AVDAGTSGPEASVAKLLWANWHRDLGQLAMEVQGASSLLAPVAPS 355 Query 350 NGGARLVPEAGTPNSPACWMDELLYARAATIYAGSSQIQRNVIGERLLGLPKEPRP 405 + A PE W L+ RA TIY GS++IQRN+I ER+LGLP+E RP Sbjct 356 SDIAD--PEHLELGE---WQRLFLFTRADTIYGGSNEIQRNIISERVLGLPREARP 406 >gi|312138169|ref|YP_004005505.1| acyl-CoA dehydrogenase [Rhodococcus equi 103S] gi|325674927|ref|ZP_08154614.1| acyl-CoA dehydrogenase [Rhodococcus equi ATCC 33707] gi|311887508|emb|CBH46820.1| acyl-CoA dehydrogenase [Rhodococcus equi 103S] gi|325554513|gb|EGD24188.1| acyl-CoA dehydrogenase [Rhodococcus equi ATCC 33707] Length=403 Score = 315 bits (806), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 177/407 (44%), Positives = 246/407 (61%), Gaps = 31/407 (7%) Query 10 EAFRDRIREFVAEHLP------PGWPGPGALPPHEREEFARHWRRALAGAGLVAVSWPTE 63 EAF IRE++ E+L G GPG HE E W R LA AG + WP E Sbjct 17 EAFAREIREWLEENLSGKFAELKGLGGPG--REHEAFEERLEWDRHLAAAGWTCLGWPKE 74 Query 64 YGGGGLSPMEQVVLAEEFARAGAPERAENDLLGIDLLGNTLIALGSEAQKRHFLPRILSG 123 YGG + +Q++ +E+ARA AP R + +G +LLG TLIA G+E QK+ FLP I + Sbjct 75 YGGREATLSQQIIFHQEYARANAPARVSH--IGEELLGPTLIAFGTEEQKQRFLPGIKTV 132 Query 124 EHRWCQGFSEPEAGSDLASVRTRGVLDGDEWVINGHKIWTSAGTTANWIFLLARTDPSAA 183 WCQG+SEP AGSDLA+V T LDGD+WV+NG K+WTS A+W F++ART+P ++ Sbjct 133 TELWCQGYSEPGAGSDLANVSTTARLDGDQWVVNGQKVWTSLAHLADWCFVVARTEPGSS 192 Query 184 KHRGLSFLLVPMDQPGVVVRPIVNAAGHSSFSEVFLTDARTSAGNVVGRVGDGWSTAMTL 243 +H+GLS+LLVPM+Q GV VRPI+ G S F+EVF +ART A VVG G+GW TAM Sbjct 193 RHKGLSYLLVPMNQEGVEVRPIIQLTGTSEFNEVFFDNARTDADLVVGGEGNGWGTAMGT 252 Query 244 LGFERGSHIATAAIDFERDLQRLCELARDRGLHTDPRVRDGLAWCYARVQIMRYRGYRDL 303 L FERG I F R+L+ + ELA G +P +R+ ++ + +Q++R R L Sbjct 253 LTFERGVSTLGQQIGFARELESIVELAERNGAAENPAIRNKISRAWTSLQVIRAHALRTL 312 Query 304 TLALTGRPPGAEAAITKVIWSEYFRRYTDLAVEILGLEALGPRGPGNGGARLVPEAGTPN 363 ++ G EA++ K++W+ + R +LA+E+ G A L+ G N Sbjct 313 A-SVDASANGGEASVAKLLWANWHRGLGELAMEV------------QGAASLI---GVEN 356 Query 364 S-PACWMDEL----LYARAATIYAGSSQIQRNVIGERLLGLPKEPRP 405 + P +++L L+ RA TIY GS++IQRN+I ER+LGLP+E RP Sbjct 357 TEPGEELNDLQRLWLFTRADTIYGGSNEIQRNIIAERVLGLPREARP 403 >gi|296141506|ref|YP_003648749.1| acyl-CoA dehydrogenase domain-containing protein [Tsukamurella paurometabola DSM 20162] gi|296029640|gb|ADG80410.1| acyl-CoA dehydrogenase domain protein [Tsukamurella paurometabola DSM 20162] Length=382 Score = 314 bits (805), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 181/400 (46%), Positives = 234/400 (59%), Gaps = 31/400 (7%) Query 12 FRDRIREFVAEHLPPGWPG-PGALPPHEREEFARH---WRRALAGAGLVAVSWPTEYGGG 67 +R RIRE++A +L + G GA P EF W R LA AGL V WP +YGG Sbjct 8 YRARIREWLATNLAGEFAGLRGAGGPGREHEFFDERVAWERHLAAAGLNCVGWPAQYGGA 67 Query 68 GLSPMEQVVLAEEFARAGAPERAENDLLGIDLLGNTLIALGSEAQKRHFLPRILSGEHRW 127 G + +QV+ EE+ARA AP + + LG +LLG TLIA GS QK+ FLP I W Sbjct 68 GATLAQQVIFHEEYARAEAPAKVSH--LGQELLGPTLIAFGSTEQKQRFLPAIREVRELW 125 Query 128 CQGFSEPEAGSDLASVRTRGVLDGDEWVINGHKIWTSAGTTANWIFLLARTDPSAAKHRG 187 CQG+SEP AGSDLA+V T L+GDEWVI+G K+WTS A+W F++ART+P + +HRG Sbjct 126 CQGYSEPGAGSDLANVGTTARLEGDEWVISGQKVWTSLAHVADWCFVVARTEPGSVRHRG 185 Query 188 LSFLLVPMDQPGVVVRPIVNAAGHSSFSEVFLTDARTSAGNVVGRVGDGWSTAMTLLGFE 247 LS+LLVPMDQPG+ VRPIV G S F+EVF ART+A NVVG GDGW AM L FE Sbjct 186 LSYLLVPMDQPGIEVRPIVQLTGTSEFNEVFFDGARTAAANVVGDPGDGWRVAMGTLAFE 245 Query 248 RGSHIATAAIDFERDLQRLCELARDRGLHTDPRVRDGLAWCYARVQIMRYRGYRDLTLAL 307 RG + F R+LQ L +LA D G P + + L + + +MR R L A Sbjct 246 RGVATLGQQLGFRRELQHLTDLAIDSGAVDRPEIAESLRRAWTELDVMRAHALRTLGSAE 305 Query 308 TGRPPGAEAAITKVIWSEYFRRYTDLAVEILGLEALGPRGPGNGGARLVPEAGTPNSPAC 367 TG A + K++W+ + RR ++A+ + G AG P Sbjct 306 TG-----TAEVAKLLWANWHRRLGEIAMAVRG------------------AAGLLADPEF 342 Query 368 --WMDELLYARAATIYAGSSQIQRNVIGERLLGLPKEPRP 405 W L+ RA TIY GS++IQRN++ ER+LGLP+E RP Sbjct 343 DDWQRLFLFTRADTIYGGSNEIQRNILAERVLGLPREARP 382 >gi|312195766|ref|YP_004015827.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp. EuI1c] gi|311227102|gb|ADP79957.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp. EuI1c] Length=409 Score = 314 bits (804), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 181/400 (46%), Positives = 239/400 (60%), Gaps = 23/400 (5%) Query 8 EAEAFRDRIREFVAEHLPP------GWPGPGALPPHEREEFARHWRRALAGAGLVAVSWP 61 E+ FR +R ++AE L G GPG HE E W R LA AG +SWP Sbjct 26 ESAGFRAEVRGWLAEALAGEFGAARGLGGPGR--EHEAFELRAAWERHLAAAGWTCLSWP 83 Query 62 TEYGGGGLSPMEQVVLAEEFARAGAPERAENDLLGIDLLGNTLIALGSEAQKRHFLPRIL 121 YGG LS +QVV EE+ARA AP R L+G ++G TLIA G+E Q+R FLP I Sbjct 84 EAYGGRALSLADQVVFHEEYARADAPARV--GLIGDGMVGPTLIAFGTEDQRRRFLPPIR 141 Query 122 SGEHRWCQGFSEPEAGSDLASVRTRGVLDGDEWVINGHKIWTSAGTTANWIFLLARTDPS 181 +G WCQ +SEP AGSDLA++ TR DGD++VING K+W+S ++W F L RT+P Sbjct 142 AGAALWCQLYSEPGAGSDLAALTTRAHRDGDDFVINGQKVWSSLAHQSDWGFALVRTEPG 201 Query 182 AAKHRGLSFLLVPMDQPGVVVRPIVNAAGHSSFSEVFLTDARTSAGNVVGRVGDGWSTAM 241 + +H+GLS+LLVPM QPG+ +RPIV+ G S F+EVF DART N+VG GDGW M Sbjct 202 SRRHKGLSYLLVPMRQPGIDIRPIVSMTGTSEFNEVFFDDARTPTANLVGAEGDGWKIGM 261 Query 242 TLLGFERGSHIATAAIDFERDLQRLCELARDRGLHTDPRVRDGLAWCYARVQIMRYRGYR 301 LGFERG+ I F+R+L+R+ LA+ G P +RD L + V+IMR+ R Sbjct 262 ATLGFERGTFTVGQQIGFKRELERVIALAKRNGGWDRPDLRDRLVRAWIGVEIMRFTALR 321 Query 302 DLTLALTGRPPGAEAAITKVIWSEYFRRYTDLAVEILGLEALGPRGPGNGGARLVPEAGT 361 L + PPG ++I K+ WS + +R +LA+++LG + L LV G Sbjct 322 TLADSAADTPPGPASSIGKLYWSTWHQRLGELAMDVLGADGL-----------LVE--GE 368 Query 362 PNSPACWMDELLYARAATIYAGSSQIQRNVIGERLLGLPK 401 P L++RA TIYAGSS+IQRN+I ER LGLP+ Sbjct 369 PYELRPEQSLFLFSRADTIYAGSSEIQRNIIAERTLGLPR 408 >gi|326328928|ref|ZP_08195259.1| putative acyl-CoA dehydrogenase [Nocardioidaceae bacterium Broad-1] gi|325953271|gb|EGD45280.1| putative acyl-CoA dehydrogenase [Nocardioidaceae bacterium Broad-1] Length=392 Score = 312 bits (800), Expect = 5e-83, Method: Compositional matrix adjust. Identities = 179/412 (44%), Positives = 241/412 (59%), Gaps = 29/412 (7%) Query 1 VDVSYPPEAEAFRDRIREFVAEHLPPGWPG----PGALPPHEREEFARHWRRALAGAGLV 56 +D++Y E EAFR +RE++A+HL W G HE E W R LA G Sbjct 1 MDLTYSAEDEAFRAEVREWLADHLAGEWAALRGTGGNGRDHESYEGRLAWNRYLASHGWT 60 Query 57 AVSWPTEYGGGGLSPMEQVVLAEEFARAGAPERAENDLLGIDLLGNTLIALGSEAQKRHF 116 + WP E+GG GL +QV+ EE+ARA AP R + LG +LLG TLIA G+ AQ+ F Sbjct 61 CLGWPEEHGGRGLPLFQQVIFHEEYARADAPVRINH--LGEELLGPTLIAHGTVAQQERF 118 Query 117 LPRILSGEHRWCQGFSEPEAGSDLASVRTRGVLDGDEWVINGHKIWTSAGTTANWIFLLA 176 LP+I++ E WCQG+SEP AGSDLA VRTR LDGD WV++G K+WTS ++W F++ Sbjct 119 LPKIVAVEELWCQGYSEPGAGSDLAGVRTRARLDGDRWVVDGQKVWTSNAHLSDWCFVVC 178 Query 177 RTDPSAAKHRGLSFLLVPMDQPGVVVRPIVNAAGHSSFSEVFLTDARTSAGNVVGRVGDG 236 RT P + +H GLS+LLVPM Q GV VRPI G S F+EVF A T+A VVG GDG Sbjct 179 RTTPGSERHHGLSYLLVPMAQDGVDVRPIQQLTGTSEFNEVFFDGAVTAADLVVGEPGDG 238 Query 237 WSTAMTLLGFERGSHIATAAIDFERDLQRLCELARDRGLHTDPRVRDGLAWCYARVQIMR 296 W AM LGFERG + F R+L+ + E AR G DP + LA + ++++R Sbjct 239 WKVAMATLGFERGVSTIGQQVGFARELETVEEAARANGTIDDPGIAARLAQAHVGLEVLR 298 Query 297 YRGYRDLTLALTGRPPGAEAAITKVIWSEYFRRYTDLAVEILGLEALGPRGPGNGGARLV 356 R L+ +G G EA+++K++W+ + R +LA++ +GL Sbjct 299 LHALRTLSAYDSG-SSGPEASVSKLLWARWHRDLGELAMDAVGL---------------- 341 Query 357 PEAGTPNSPACWMDEL----LYARAATIYAGSSQIQRNVIGERLLGLPKEPR 404 AG +D L L++RA TIY GS +IQRN+I ER+LGLP+E R Sbjct 342 --AGLTTGDDYALDRLQSLYLFSRADTIYGGSDEIQRNIIAERVLGLPREAR 391 >gi|169627700|ref|YP_001701349.1| acyl-CoA dehydrogenase FadE [Mycobacterium abscessus ATCC 19977] gi|169239667|emb|CAM60695.1| Probable acyl-CoA dehydrogenase FadE [Mycobacterium abscessus] Length=397 Score = 312 bits (799), Expect = 7e-83, Method: Compositional matrix adjust. Identities = 176/401 (44%), Positives = 239/401 (60%), Gaps = 30/401 (7%) Query 10 EAFRDRIREFVAEHLP------PGWPGPGALPPHEREEFARHWRRALAGAGLVAVSWPTE 63 + R IRE++AE+L G GPG+ HE E W R LA AG + WP E Sbjct 21 DQVRTEIREWLAENLVGEFAELKGLGGPGS--EHEAFEERLAWNRHLAAAGWTCLGWPVE 78 Query 64 YGGGGLSPMEQVVLAEEFARAGAPERAENDLLGIDLLGNTLIALGSEAQKRHFLPRILSG 123 +GG G + ++V+ EE+ARA AP + + LG +LLG TLIA G+ Q++ FLP I Sbjct 79 HGGRGATVSQRVIFYEEYARAEAPHKVNH--LGEELLGPTLIAYGTPEQQQRFLPAIRDV 136 Query 124 EHRWCQGFSEPEAGSDLASVRTRGVLDGDEWVINGHKIWTSAGTTANWIFLLARTDPSAA 183 WCQG+SEP AGSDLA+V T VLDG +WVING K+WTS + W F++ART+P ++ Sbjct 137 TELWCQGYSEPGAGSDLANVSTSAVLDGGDWVINGQKVWTSLALQSQWCFVVARTEPGSS 196 Query 184 KHRGLSFLLVPMDQPGVVVRPIVNAAGHSSFSEVFLTDARTSAGNVVGRVGDGWSTAMTL 243 +H+GLS+LLVP+DQPGV +RPI+ G S F+EVF +ARTSA VVG GDGW AM Sbjct 197 RHKGLSYLLVPLDQPGVEIRPIIQLTGTSEFNEVFFDNARTSADLVVGEPGDGWRVAMGT 256 Query 244 LGFERGSHIATAAIDFERDLQRLCELARDRGLHTDPRVRDGLAWCYARVQIMRYRGYRDL 303 L FERG I + R+L RL ELA+ G DP +R+ LA Y ++ MR Sbjct 257 LTFERGVSTLGNQITYARELSRLAELAKSNGAADDPAIRERLAQAYVGMRTMRA-----Y 311 Query 304 TLALTGRPPGAEAAITKVIWSEYFRRYTDLAVEILGLEALGPRGPGNGGARLVPEAGTPN 363 LA + ++K++W+ + R +LA+EI+G + L+ AG + Sbjct 312 ALATMDEERPGQDNVSKLLWANWHRDLGELAMEIIGT------------STLLTNAGEMD 359 Query 364 SPACWMDELLYARAATIYAGSSQIQRNVIGERLLGLPKEPR 404 W L++RA TIY GS++IQRN+I ER+LGLP+E R Sbjct 360 E---WQRLFLFSRADTIYGGSNEIQRNIISERVLGLPREAR 397 >gi|119716991|ref|YP_923956.1| acyl-CoA dehydrogenase domain-containing protein [Nocardioides sp. JS614] gi|119537652|gb|ABL82269.1| acyl-CoA dehydrogenase domain protein [Nocardioides sp. JS614] Length=378 Score = 310 bits (793), Expect = 3e-82, Method: Compositional matrix adjust. Identities = 175/396 (45%), Positives = 241/396 (61%), Gaps = 26/396 (6%) Query 16 IREFVAEHLPPGWPG----PGALPPHEREEFARHWRRALAGAGLVAVSWPTEYGGGGLSP 71 +R ++ EHL W GA HE E W R LA G + WPTE+GG GLS Sbjct 1 MRGWLEEHLTGEWAALKGLGGAGRDHEAHEERVAWNRLLAEHGWTCLGWPTEHGGRGLSL 60 Query 72 MEQVVLAEEFARAGAPERAENDLLGIDLLGNTLIALGSEAQKRHFLPRILSGEHRWCQGF 131 ++QV+ EE+ARA AP R + LG +LLG TLIA G+ Q++ FLPRI++ E W QG+ Sbjct 61 VQQVIFHEEYARADAPGRVNH--LGEELLGPTLIAFGTPEQQQRFLPRIVAVEDLWAQGY 118 Query 132 SEPEAGSDLASVRTRGVLDGDEWVINGHKIWTSAGTTANWIFLLARTDPSAAKHRGLSFL 191 SEP+AGSDLA+V+T+ L GDEWVI+G K+WTS + W F++ RT P + +H GLSFL Sbjct 119 SEPDAGSDLANVQTKARLVGDEWVIDGQKVWTSNAHLSQWAFVVCRTVPGSTRHHGLSFL 178 Query 192 LVPMDQPGVVVRPIVNAAGHSSFSEVFLTDARTSAGNVVGRVGDGWSTAMTLLGFERGSH 251 LVP++Q GV +RPI G S F+EVF T ART+A VVG G GW AM LLGFERG Sbjct 179 LVPLEQDGVEIRPIEQLTGGSEFNEVFFTGARTAADLVVGEPGGGWRVAMALLGFERGVS 238 Query 252 IATAAIDFERDLQRLCELARDRGLHTDPRVRDGLAWCYARVQIMRYRGYRDLTLALTGRP 311 + + F R+L + +LAR+ G DP +RD LA +++MR++ R L G Sbjct 239 VLGQVVGFARELSGVVDLARETGAIDDPVLRDRLAALKVELEVMRFQALRGLASNDAG-- 296 Query 312 PGAEAAITKVIWSEYFRRYTDLAVEILGLEALGPRGPGNGGARLVPEAGTPNSPAC---W 368 A++ K++W+ + RR ++A+++ G GG +P G+P +P W Sbjct 297 ---SASVFKLVWAGWHRRLGEVAMDV----------AGAGGLTALP--GSPEAPYQLDRW 341 Query 369 MDELLYARAATIYAGSSQIQRNVIGERLLGLPKEPR 404 L++RA TIY GS ++QRN++ ER+LGLPKE R Sbjct 342 QRLFLFSRADTIYGGSDEVQRNILAERVLGLPKEAR 377 >gi|328881715|emb|CCA54954.1| putative acyl-CoA dehydrogenase [Streptomyces venezuelae ATCC 10712] Length=378 Score = 310 bits (793), Expect = 4e-82, Method: Compositional matrix adjust. Identities = 183/401 (46%), Positives = 226/401 (57%), Gaps = 32/401 (7%) Query 10 EAFRDRIREFVAEHLPPGWP---GPGALPPHEREEFARH--WRRALAGAGLVAVSWPTEY 64 E FR IR ++ HL + G G P E E FA W R LA G V WP EY Sbjct 5 EEFRTEIRGWLKTHLSGSFAALRGRGG-PGREHEAFAERLTWERHLAAHGWTCVGWPKEY 63 Query 65 GGGGLSPMEQVVLAEEFARAGAPERAENDLLGIDLLGNTLIALGSEAQKRHFLPRILSGE 124 GG G S EQ+ EE+A A AP R + +G LLG TL+ G+E QK FLP I + E Sbjct 64 GGRGASVAEQIAFHEEYALADAPARVNH--IGEQLLGPTLVDHGTEEQKARFLPPIRAVE 121 Query 125 HRWCQGFSEPEAGSDLASVRTRGVLDGDEWVINGHKIWTSAGTTANWIFLLARTDPSAAK 184 WCQG+SEP AGSDLA+VRTR L G WVI+G KIWTS A W F+LART+P + + Sbjct 122 ELWCQGYSEPGAGSDLAAVRTRATLTGGSWVIDGQKIWTSLAHEAQWCFVLARTEPGSTR 181 Query 185 HRGLSFLLVPMDQPGVVVRPIVNAAGHSSFSEVFLTDARTSAGNVVGRVGDGWSTAMTLL 244 H GLS+LLVP+DQPGV +RPIV G S F+EVF A T A +VVG GDGW AM L Sbjct 182 HTGLSYLLVPLDQPGVEIRPIVQLTGTSEFNEVFFDGAVTDAAHVVGAPGDGWRIAMATL 241 Query 245 GFERGSHIATAAIDFERDLQRLCELARDRGLHTDPRVRDGLAWCYARVQIMRYRGYRDLT 304 G+ERG + F R+L L LAR G DP +RD L +A ++ +R R Sbjct 242 GYERGVSTLGQQVGFRRELDALVALARRNGAAADPDIRDRLTRAWAGLEALRAGALR--- 298 Query 305 LALTGRPPGAEAAITKVIWSEYFRRYTDLAVEILGLEALGPRGPGNGGARLVPEAGTPNS 364 G + + K+ WS + R +LA+E+ G A AG P Sbjct 299 --------GTDPSAAKLYWSHWHRDLGELALEVCGPAA-------------TLAAGAPYE 337 Query 365 PACWMDELLYARAATIYAGSSQIQRNVIGERLLGLPKEPRP 405 W L++RA T+YAGSS+IQRN+I ER+LGLPKEPRP Sbjct 338 LDDWQRLFLFSRADTVYAGSSEIQRNIIAERVLGLPKEPRP 378 >gi|288916053|ref|ZP_06410434.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EUN1f] gi|288352449|gb|EFC86645.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EUN1f] Length=397 Score = 309 bits (791), Expect = 6e-82, Method: Compositional matrix adjust. Identities = 184/411 (45%), Positives = 241/411 (59%), Gaps = 22/411 (5%) Query 1 VDVSYPPEAEAFRDRIREFVAEHLPPGWPGPGALP----PHEREEFARHWRRALAGAGLV 56 +D++ E FR ++R+++AE+L + G L HE E W R LA AG Sbjct 1 MDLTSSVADEEFRQQVRQWLAENLVGEFAGLRGLGGSGREHEAFEARVAWNRHLAAAGWT 60 Query 57 AVSWPTEYGGGGLSPMEQVVLAEEFARAGAPERAENDLLGIDLLGNTLIALGSEAQKRHF 116 + WP E+GG GLS +QV+ EE+ARA AP R + LG +LLG TLIA G++ Q+ F Sbjct 61 CLGWPVEFGGRGLSLFQQVIFHEEYARADAPARVNH--LGEELLGPTLIAHGTDEQRARF 118 Query 117 LPRILSGEHRWCQGFSEPEAGSDLASVRTRGVLDGDEWVINGHKIWTSAGTTANWIFLLA 176 LP I + WCQG+SEP+AGSDLASVRTR LDGD+WVI+G K+WTS A+W F + Sbjct 119 LPGIAAATELWCQGYSEPDAGSDLASVRTRARLDGDQWVIDGQKVWTSLAQQADWCFAVV 178 Query 177 RTDPSAAKHRGLSFLLVPMDQPGVVVRPIVNAAGHSSFSEVFLTDARTSAGNVVGRVGDG 236 RTDP + +H GLS+LLVPMDQPGV VRPIV G S F+EVF ART+A VVG GDG Sbjct 179 RTDPGSRRHAGLSYLLVPMDQPGVQVRPIVQLTGTSEFNEVFFDGARTAADLVVGAPGDG 238 Query 237 WSTAMTLLGFERGSHIATAAIDFERDLQRLCELARDRGLHTDPRVRDGLAWCYARVQIMR 296 W AM LGFERG + F R+L + AR G DP + D LA ++++R Sbjct 239 WRVAMATLGFERGVSTVGQQVGFARELDAVVAEARRTGAVDDPVLADRLARARLGLEVLR 298 Query 297 YRGYRDLTLALTGRPP---GAEAAITKVIWSEYFRRYTDLAVEILGLEALGPRGPGNGGA 353 R L+ TG + A+++K++W + R +LA+ + G L P G Sbjct 299 THAMRTLSAHDTGSAEPVSSSAASVSKLLWGRWHRDLGELAMAVRGTAGLTVAEPPYGLD 358 Query 354 RLVPEAGTPNSPACWMDELLYARAATIYAGSSQIQRNVIGERLLGLPKEPR 404 RL L++RA TIY GS +IQRN+I ER+LGLPKEPR Sbjct 359 RL-------------QALYLFSRADTIYGGSDEIQRNIIAERVLGLPKEPR 396 >gi|240169775|ref|ZP_04748434.1| putative acyl-CoA dehydrogenase [Mycobacterium kansasii ATCC 12478] Length=385 Score = 304 bits (778), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 174/403 (44%), Positives = 232/403 (58%), Gaps = 27/403 (6%) Query 8 EAEAFRDRIREFVAEHLP------PGWPGPGALPPHEREEFARHWRRALAGAGLVAVSWP 61 + E FR +R ++ ++L G GPG HE E R W + LA AGL + WP Sbjct 3 DVEEFRAEVRRWLTDNLVGEFAALKGLGGPGR--EHEAFEERRAWNQHLAAAGLTCLGWP 60 Query 62 TEYGGGGLSPMEQVVLAEEFARAGAPERAENDLLGIDLLGNTLIALGSEAQKRHFLPRIL 121 E+GG GL +V EE+ARA AP + + G +LLG TLIA G+ Q++ FLPRIL Sbjct 61 VEHGGRGLPTAHRVAFYEEYARADAPVKVNH--FGEELLGPTLIAFGTPEQQQRFLPRIL 118 Query 122 SGEHRWCQGFSEPEAGSDLASVRTRGVLDGDEWVINGHKIWTSAGTTANWIFLLARTDPS 181 WCQG+SEP AGSDLA+V T LDGD+WVING K+WTS + W F++ART+ Sbjct 119 DVTELWCQGYSEPGAGSDLANVSTAAELDGDQWVINGQKVWTSLAHLSQWCFVVARTEKG 178 Query 182 AAKHRGLSFLLVPMDQPGVVVRPIVNAAGHSSFSEVFLTDARTSAGNVVGRVGDGWSTAM 241 + +H GLS+LLVP+DQPGV +RPIV G S F+EVF DART AG VVGR GDGW AM Sbjct 179 SKRHAGLSYLLVPLDQPGVQIRPIVQITGTSEFNEVFFDDARTDAGMVVGRPGDGWRVAM 238 Query 242 TLLGFERGSHIATAAIDFERDLQRLCELARDRGLHTDPRVRDGLAWCYARVQIMRYRGYR 301 L FERG I + R+L RL ELA+ G DP +R+ L + ++ MR Sbjct 239 ATLTFERGVSTLGQQIVYARELSRLVELAQRTGAADDPFIRERLTRAWTGLRAMRSYALA 298 Query 302 DLTLALTGRPPGAEAAITKVIWSEYFRRYTDLAVEILGLEALGPRGPGNGGARLVPEAGT 361 L +P ++K++W+ + R +LA++++G L A T Sbjct 299 TLEAPAVEQP--GPDNVSKLLWANWHRSLGELAMDVVGKPGL---------------ALT 341 Query 362 PNSPACWMDELLYARAATIYAGSSQIQRNVIGERLLGLPKEPR 404 W L+ RA TIY GS++IQRN+I ER+LGLP+E + Sbjct 342 DGEFDEWQRLYLFTRADTIYGGSNEIQRNIIAERVLGLPREVK 384 >gi|41406605|ref|NP_959441.1| FadE30 [Mycobacterium avium subsp. paratuberculosis K-10] gi|118465432|ref|YP_879881.1| acyl-CoA dehydrogenase [Mycobacterium avium 104] gi|254773558|ref|ZP_05215074.1| putative acyl-CoA dehydrogenase [Mycobacterium avium subsp. avium ATCC 25291] gi|41394954|gb|AAS02824.1| FadE30 [Mycobacterium avium subsp. paratuberculosis K-10] gi|118166719|gb|ABK67616.1| putative acyl-CoA dehydrogenase [Mycobacterium avium 104] gi|336458501|gb|EGO37474.1| acyl-CoA dehydrogenase [Mycobacterium avium subsp. paratuberculosis S397] Length=382 Score = 303 bits (776), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 173/403 (43%), Positives = 235/403 (59%), Gaps = 30/403 (7%) Query 8 EAEAFRDRIREFVAEHLP------PGWPGPGALPPHEREEFARHWRRALAGAGLVAVSWP 61 + E FR +R ++A++L G GPG HE E R W + LA AGL + WP Sbjct 3 DVEEFRAEVRSWLADNLVGEFAALKGLGGPGR--EHEAFEERRAWNQHLAKAGLTCLGWP 60 Query 62 TEYGGGGLSPMEQVVLAEEFARAGAPERAENDLLGIDLLGNTLIALGSEAQKRHFLPRIL 121 E+GG GLS +V EE+ARA AP++ + G +LLG TLIA G+ Q++ FLPRIL Sbjct 61 VEHGGRGLSTAHRVAFYEEYARADAPDKVNH--FGEELLGPTLIAFGTPEQQQRFLPRIL 118 Query 122 SGEHRWCQGFSEPEAGSDLASVRTRGVLDGDEWVINGHKIWTSAGTTANWIFLLARTDPS 181 WCQG+SEP AGSDLA+V T LDGD+WVING K+WTS + W F++ART+ Sbjct 119 DVTELWCQGYSEPGAGSDLANVSTTAELDGDQWVINGQKVWTSLAHLSQWCFVVARTEKG 178 Query 182 AAKHRGLSFLLVPMDQPGVVVRPIVNAAGHSSFSEVFLTDARTSAGNVVGRVGDGWSTAM 241 + +H GLS+LLVP+DQPGV +RPIV G + F+EVF DART A VVG+ GDGW AM Sbjct 179 SKRHAGLSYLLVPLDQPGVQIRPIVQITGTAEFNEVFFDDARTDASMVVGQPGDGWRVAM 238 Query 242 TLLGFERGSHIATAAIDFERDLQRLCELARDRGLHTDPRVRDGLAWCYARVQIMRYRGYR 301 L FERG I + R+L L ELAR G DP +R+ L + ++ M R Sbjct 239 GTLTFERGVSTLGQQIRYARELSNLAELARRNGAADDPFIRERLTRAWTGLRAM-----R 293 Query 302 DLTLALTGRPPGAEAAITKVIWSEYFRRYTDLAVEILGLEALGPRGPGNGGARLVPEAGT 361 LA + ++K++W+ + R +LA++++G PG +P+ Sbjct 294 SYALATMDVEQPGQDNVSKLLWANWHRALGELAMDVIG-------KPG----MTMPDGEF 342 Query 362 PNSPACWMDELLYARAATIYAGSSQIQRNVIGERLLGLPKEPR 404 W L+ RA TIY GS++IQRN+I ER+LGLP+E + Sbjct 343 DE----WQRLFLFTRADTIYGGSNEIQRNIIAERVLGLPREVK 381 >gi|296166604|ref|ZP_06849034.1| acyl-CoA dehydrogenase FadE30 [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295898090|gb|EFG77666.1| acyl-CoA dehydrogenase FadE30 [Mycobacterium parascrofulaceum ATCC BAA-614] Length=382 Score = 302 bits (774), Expect = 6e-80, Method: Compositional matrix adjust. Identities = 176/403 (44%), Positives = 234/403 (59%), Gaps = 30/403 (7%) Query 8 EAEAFRDRIREFVAEHLP------PGWPGPGALPPHEREEFARHWRRALAGAGLVAVSWP 61 + E FR +R ++A++L G GPG HE E R W + LA AGL + WP Sbjct 3 DVEEFRAEVRGWLADNLVGEFAALKGLGGPGR--EHEAFEERRAWNQHLAKAGLTCLGWP 60 Query 62 TEYGGGGLSPMEQVVLAEEFARAGAPERAENDLLGIDLLGNTLIALGSEAQKRHFLPRIL 121 E+GG GLS +V EE+ARA AP++ + G +LLG TLIA G+ Q+R FLP+IL Sbjct 61 VEHGGRGLSTAHRVAFYEEYARADAPDKVNH--FGEELLGPTLIAFGTPEQQRRFLPKIL 118 Query 122 SGEHRWCQGFSEPEAGSDLASVRTRGVLDGDEWVINGHKIWTSAGTTANWIFLLARTDPS 181 WCQG+SEP AGSDLA+V T LDGDEWVING K+WTS A W F++ART+ Sbjct 119 DVTELWCQGYSEPGAGSDLANVSTTAELDGDEWVINGQKVWTSLAHWAQWCFVVARTEKG 178 Query 182 AAKHRGLSFLLVPMDQPGVVVRPIVNAAGHSSFSEVFLTDARTSAGNVVGRVGDGWSTAM 241 + +H GLS+LLVP+DQPGV VRPI+ G S F+EVF DART A VVG GDGW AM Sbjct 179 SKRHAGLSYLLVPLDQPGVQVRPIIQLTGDSEFNEVFFDDARTEAQLVVGEPGDGWRVAM 238 Query 242 TLLGFERGSHIATAAIDFERDLQRLCELARDRGLHTDPRVRDGLAWCYARVQIMRYRGYR 301 L FERG I + R+L L +LAR G DP +R+ L + ++ M R Sbjct 239 GTLTFERGVSTLGQQIRYARELSNLADLARRNGAADDPFIRERLTRAWTGLRAM-----R 293 Query 302 DLTLALTGRPPGAEAAITKVIWSEYFRRYTDLAVEILGLEALGPRGPGNGGARLVPEAGT 361 LA + ++K++W+ + R +LA++++G PG L G Sbjct 294 SYALATMDVEQPGQDNVSKLLWANWHRGLGELAMDVIG-------KPG-----LTLSDGE 341 Query 362 PNSPACWMDELLYARAATIYAGSSQIQRNVIGERLLGLPKEPR 404 + W L+ RA TIY GS++IQRN+I ER+LGLP+E + Sbjct 342 FDE---WQRLFLFTRADTIYGGSNEIQRNIIAERVLGLPREVK 381 >gi|342862389|ref|ZP_08719029.1| acyl-CoA dehydrogenase [Mycobacterium colombiense CECT 3035] gi|342130060|gb|EGT83394.1| acyl-CoA dehydrogenase [Mycobacterium colombiense CECT 3035] Length=382 Score = 302 bits (773), Expect = 9e-80, Method: Compositional matrix adjust. Identities = 173/403 (43%), Positives = 235/403 (59%), Gaps = 30/403 (7%) Query 8 EAEAFRDRIREFVAEHLP------PGWPGPGALPPHEREEFARHWRRALAGAGLVAVSWP 61 + E FR +R+++A++L G GPG HE E R W + LA AGL + WP Sbjct 3 DVEEFRAEVRQWLADNLVGEFAALKGLGGPGR--EHEAFEERRAWNQHLAKAGLTCLGWP 60 Query 62 TEYGGGGLSPMEQVVLAEEFARAGAPERAENDLLGIDLLGNTLIALGSEAQKRHFLPRIL 121 E+GG GLS +V EE+A+A AP++ + G +LLG TLIA G+ Q++ FLPRIL Sbjct 61 VEHGGRGLSTAHRVAFYEEYAKADAPDKVNH--FGEELLGPTLIAFGTPEQQQRFLPRIL 118 Query 122 SGEHRWCQGFSEPEAGSDLASVRTRGVLDGDEWVINGHKIWTSAGTTANWIFLLARTDPS 181 WCQG+SEP AGSDLA+V T LDGDEWVING K+WTS A W F++ART+ Sbjct 119 DVTELWCQGYSEPGAGSDLANVATTAELDGDEWVINGQKVWTSLAHWAQWCFVVARTEKG 178 Query 182 AAKHRGLSFLLVPMDQPGVVVRPIVNAAGHSSFSEVFLTDARTSAGNVVGRVGDGWSTAM 241 + +H GLS+LLVP+DQPGV VRPI+ G S F+EVF DART+A VVG GDGW AM Sbjct 179 SKRHAGLSYLLVPLDQPGVEVRPIIQLTGDSEFNEVFFDDARTAADLVVGEPGDGWRVAM 238 Query 242 TLLGFERGSHIATAAIDFERDLQRLCELARDRGLHTDPRVRDGLAWCYARVQIMRYRGYR 301 L FERG I + R+L L ELA+ G DP +R+ L + ++ MR Sbjct 239 GTLTFERGVSTLGQQIRYARELSNLAELAQRTGAADDPFIRERLTRAWTGLRAMRSYALA 298 Query 302 DLTLALTGRPPGAEAAITKVIWSEYFRRYTDLAVEILGLEALGPRGPGNGGARLVPEAGT 361 + + PG + ++K++W+ + R +LA++++G L T Sbjct 299 TMDV----EQPGQD-NVSKLLWANWHRGLGELAMDVVGKPGL---------------TLT 338 Query 362 PNSPACWMDELLYARAATIYAGSSQIQRNVIGERLLGLPKEPR 404 W L+ RA TIY GS++IQRN+I ER+LGLP+E + Sbjct 339 DGEFDEWQRLFLFTRADTIYGGSNEIQRNIIAERVLGLPREVK 381 >gi|226304380|ref|YP_002764338.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4] gi|226183495|dbj|BAH31599.1| putative acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4] Length=409 Score = 301 bits (770), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 175/417 (42%), Positives = 243/417 (59%), Gaps = 21/417 (5%) Query 1 VDVSYPPEAEAFRDR----IREFVAEHLP------PGWPGPGALPPHEREEFARHWRRAL 50 +D S P+ + D + +++AE+L G GPG+ HE E W + L Sbjct 1 MDQSESPDGQMTDDEFAATVAQWLAENLTGKFAQLKGKGGPGS--EHEFFEQRLEWDKHL 58 Query 51 AGAGLVAVSWPTEYGGGGLSPMEQVVLAEEFARAGAPERAENDLLGIDLLGNTLIALGSE 110 A AG + WP E+GG G S +QV+ +E+A+AGAP R + +G +LLG TLIA G++ Sbjct 59 AAAGWTCLGWPKEFGGRGASISQQVIFHQEYAKAGAPARVSH--IGEELLGPTLIAYGTD 116 Query 111 AQKRHFLPRILSGEHRWCQGFSEPEAGSDLASVRTRGVLDGDEWVINGHKIWTSAGTTAN 170 QKR FLP I + W QG+SEP AGSDLA+V T L+ +W+ING K+WTS A Sbjct 117 EQKRRFLPGINTVSELWSQGYSEPGAGSDLANVSTTARLEDGKWIINGQKVWTSLAHVAQ 176 Query 171 WIFLLARTDPSAAKHRGLSFLLVPMDQPGVVVRPIVNAAGHSSFSEVFLTDARTSAGNVV 230 W F++ RT+ + +H+GLSFLLVP+DQPGV VRPI G S F+EVF DA T A VV Sbjct 177 WCFVVCRTEVGSKRHQGLSFLLVPLDQPGVTVRPIQQLTGTSEFNEVFFDDAVTDADLVV 236 Query 231 GRVGDGWSTAMTLLGFERGSHIATAAIDFERDLQRLCELARDRGLHTDPRVRDGLAWCYA 290 G G+GW AM LL FERG I F R+LQ + +LA+ G DP +R+ +A + Sbjct 237 GEPGEGWKIAMGLLTFERGVSTLGQQIGFARELQGVVDLAKANGSDQDPHIREKIARAWV 296 Query 291 RVQIMRYRGYRDLTLALTGRPPGAEAAITKVIWSEYFRRYTDLAVEILGLEAL-GPRGPG 349 +++MR R L A+ G EA++ K++W+ + R LA+++ G +L P Sbjct 297 GLRVMRAHAMRTLD-AVDAGTGGGEASVAKLLWANWHRDLGQLAMDVQGASSLVAPWADS 355 Query 350 NGGARLV--PEAGTPNSPACWMDELLYARAATIYAGSSQIQRNVIGERLLGLPKEPR 404 G A + PE + W L+ RA TIY GS++IQRN+I ER+LGLP+E R Sbjct 356 EGNASDITDPEHLELDE---WQRLFLFTRADTIYGGSNEIQRNIISERVLGLPREAR 409 >gi|229494291|ref|ZP_04388054.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis SK121] gi|229318653|gb|EEN84511.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis SK121] Length=409 Score = 300 bits (769), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 174/417 (42%), Positives = 244/417 (59%), Gaps = 21/417 (5%) Query 1 VDVSYPPEAEAFRDR----IREFVAEHLP------PGWPGPGALPPHEREEFARHWRRAL 50 +D S P+ + D + +++AE+L G GPG+ HE E W + L Sbjct 1 MDQSESPDGQMTDDEFAATVAQWLAENLTGKFAQLKGKGGPGS--EHEFFEQRLEWDKHL 58 Query 51 AGAGLVAVSWPTEYGGGGLSPMEQVVLAEEFARAGAPERAENDLLGIDLLGNTLIALGSE 110 A +G + WP E+GG G S +QV+ +E+A+AGAP R + +G +LLG TLIA G++ Sbjct 59 AASGWTCLGWPKEFGGRGASISQQVIFHQEYAKAGAPARVSH--IGEELLGPTLIAYGTD 116 Query 111 AQKRHFLPRILSGEHRWCQGFSEPEAGSDLASVRTRGVLDGDEWVINGHKIWTSAGTTAN 170 QKR FLP I + W QG+SEP AGSDLA+V T L+ +W+ING K+WTS A Sbjct 117 EQKRRFLPGINTVSELWSQGYSEPGAGSDLANVSTTARLEDGKWIINGQKVWTSLAHVAQ 176 Query 171 WIFLLARTDPSAAKHRGLSFLLVPMDQPGVVVRPIVNAAGHSSFSEVFLTDARTSAGNVV 230 W F++ RT+ + +H+GLSFLLVP+DQPGV VRPI G S F+EVF DA T A VV Sbjct 177 WCFVVCRTEVGSKRHQGLSFLLVPLDQPGVTVRPIQQLTGTSEFNEVFFDDAVTDADLVV 236 Query 231 GRVGDGWSTAMTLLGFERGSHIATAAIDFERDLQRLCELARDRGLHTDPRVRDGLAWCYA 290 G G+GW AM LL FERG I F R+LQ + +LA+ +G DP +R+ +A + Sbjct 237 GEPGEGWKIAMGLLTFERGVSTLGQQIGFARELQGVVDLAKAKGSDQDPHIREKIARAWV 296 Query 291 RVQIMRYRGYRDLTLALTGRPPGAEAAITKVIWSEYFRRYTDLAVEILGLEAL-GPRGPG 349 +++MR R L A+ G EA++ K++W+ + R LA+++ G +L P Sbjct 297 GLRVMRAHAMRTLD-AVDAGTGGGEASVAKLLWANWHRDLGQLAMDVQGASSLVAPWADS 355 Query 350 NGGARLV--PEAGTPNSPACWMDELLYARAATIYAGSSQIQRNVIGERLLGLPKEPR 404 G A + PE + W L+ RA TIY GS++IQRN+I ER+LGLP+E R Sbjct 356 EGNASDITDPEHLELDE---WQRLFLFTRADTIYGGSNEIQRNIISERVLGLPREAR 409 >gi|340628524|ref|YP_004746976.1| putative acyl-CoA dehydrogenase FADE30 [Mycobacterium canettii CIPT 140010059] gi|340006714|emb|CCC45902.1| putative acyl-CoA dehydrogenase FADE30 [Mycobacterium canettii CIPT 140010059] Length=385 Score = 300 bits (769), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 174/403 (44%), Positives = 233/403 (58%), Gaps = 27/403 (6%) Query 8 EAEAFRDRIREFVAEHLP------PGWPGPGALPPHEREEFARHWRRALAGAGLVAVSWP 61 + E FR +R ++A++L G GPG HE E R W + LA AGL + WP Sbjct 3 DVEEFRAEVRGWLADNLAGEFAALKGLGGPGR--EHEAFEERRAWNQRLAAAGLTCLGWP 60 Query 62 TEYGGGGLSPMEQVVLAEEFARAGAPERAENDLLGIDLLGNTLIALGSEAQKRHFLPRIL 121 E+GG GLS +V EE+ARA AP++ + G +LLG TLIA G+ Q+R FLPRI Sbjct 61 EEHGGRGLSTAHRVAFYEEYARADAPDKVNH--FGEELLGPTLIAFGTPQQQRRFLPRIR 118 Query 122 SGEHRWCQGFSEPEAGSDLASVRTRGVLDGDEWVINGHKIWTSAGTTANWIFLLARTDPS 181 WCQG+SEP AGSDLASV T LDGDEWVING K+WTS + W F+LART+ Sbjct 119 DVTELWCQGYSEPGAGSDLASVATTAELDGDEWVINGQKVWTSLAHLSQWCFVLARTEKG 178 Query 182 AAKHRGLSFLLVPMDQPGVVVRPIVNAAGHSSFSEVFLTDARTSAGNVVGRVGDGWSTAM 241 + +H GLS+LLVP+DQPGV +RPIV G + F+EVF DART A VVG GDGW AM Sbjct 179 SQRHAGLSYLLVPLDQPGVQIRPIVQITGTAEFNEVFFDDARTDADLVVGAPGDGWRVAM 238 Query 242 TLLGFERGSHIATAAIDFERDLQRLCELARDRGLHTDPRVRDGLAWCYARVQIMRYRGYR 301 L FERG I + R+L L ELAR DP +R+ L + ++ MR Sbjct 239 ATLTFERGVSTLGQQIVYARELSNLVELARRTAAADDPLIRERLTRAWTGLRAMRSYALA 298 Query 302 DLTLALTGRPPGAEAAITKVIWSEYFRRYTDLAVEILGLEALGPRGPGNGGARLVPEAGT 361 + +P + ++K++W+ + R +LA++++G PG +P+ Sbjct 299 TMEGPAVEQP--GQDNVSKLLWANWHRNLGELAMDVIG-------KPG----MTMPDGEF 345 Query 362 PNSPACWMDELLYARAATIYAGSSQIQRNVIGERLLGLPKEPR 404 W L+ RA TIY GS++IQRN+I ER+LGLP+E + Sbjct 346 DE----WQRLYLFTRADTIYGGSNEIQRNIIAERVLGLPREAK 384 >gi|15610696|ref|NP_218077.1| acyl-CoA dehydrogenase FADE30 [Mycobacterium tuberculosis H37Rv] gi|15843172|ref|NP_338209.1| acyl-CoA dehydrogenase, putative [Mycobacterium tuberculosis CDC1551] gi|31794736|ref|NP_857229.1| acyl-CoA dehydrogenase FADE30 [Mycobacterium bovis AF2122/97] 72 more sequence titles Length=385 Score = 300 bits (768), Expect = 3e-79, Method: Compositional matrix adjust. Identities = 173/403 (43%), Positives = 234/403 (59%), Gaps = 27/403 (6%) Query 8 EAEAFRDRIREFVAEHLP------PGWPGPGALPPHEREEFARHWRRALAGAGLVAVSWP 61 + E FR ++R ++A++L G GPG HE E R W + LA AGL + WP Sbjct 3 DVEEFRAQVRGWLADNLAGEFAALKGLGGPGR--EHEAFEERRAWNQRLAAAGLTCLGWP 60 Query 62 TEYGGGGLSPMEQVVLAEEFARAGAPERAENDLLGIDLLGNTLIALGSEAQKRHFLPRIL 121 E+GG GLS +V EE+ARA AP++ + G +LLG TLIA G+ Q+R FLPRI Sbjct 61 EEHGGRGLSTAHRVAFYEEYARADAPDKVNH--FGEELLGPTLIAFGTPQQQRRFLPRIR 118 Query 122 SGEHRWCQGFSEPEAGSDLASVRTRGVLDGDEWVINGHKIWTSAGTTANWIFLLARTDPS 181 WCQG+SEP AGSDLASV T LDGD+WVING K+WTS + W F+LART+ Sbjct 119 DVTELWCQGYSEPGAGSDLASVATTAELDGDQWVINGQKVWTSLAHLSQWCFVLARTEKG 178 Query 182 AAKHRGLSFLLVPMDQPGVVVRPIVNAAGHSSFSEVFLTDARTSAGNVVGRVGDGWSTAM 241 + +H GLS+LLVP+DQPGV +RPIV G + F+EVF DART A VVG GDGW AM Sbjct 179 SQRHAGLSYLLVPLDQPGVQIRPIVQITGTAEFNEVFFDDARTDADLVVGAPGDGWRVAM 238 Query 242 TLLGFERGSHIATAAIDFERDLQRLCELARDRGLHTDPRVRDGLAWCYARVQIMRYRGYR 301 L FERG I + R+L L ELAR DP +R+ L + ++ MR Sbjct 239 ATLTFERGVSTLGQQIVYARELSNLVELARRTAAADDPLIRERLTRAWTGLRAMRSYALA 298 Query 302 DLTLALTGRPPGAEAAITKVIWSEYFRRYTDLAVEILGLEALGPRGPGNGGARLVPEAGT 361 + +P + ++K++W+ + R +LA++++G PG +P+ Sbjct 299 TMEGPAVEQP--GQDNVSKLLWANWHRNLGELAMDVIG-------KPG----MTMPDGEF 345 Query 362 PNSPACWMDELLYARAATIYAGSSQIQRNVIGERLLGLPKEPR 404 W L+ RA TIY GS++IQRN+I ER+LGLP+E + Sbjct 346 DE----WQRLYLFTRADTIYGGSNEIQRNIIAERVLGLPREAK 384 >gi|254822642|ref|ZP_05227643.1| putative acyl-CoA dehydrogenase [Mycobacterium intracellulare ATCC 13950] Length=382 Score = 300 bits (767), Expect = 4e-79, Method: Compositional matrix adjust. Identities = 174/403 (44%), Positives = 236/403 (59%), Gaps = 30/403 (7%) Query 8 EAEAFRDRIREFVAEHLP------PGWPGPGALPPHEREEFARHWRRALAGAGLVAVSWP 61 + E FR +R ++A++L G GPG HE E R W + LA AGL + WP Sbjct 3 DVEEFRAEVRSWLADNLVGEFAALKGLGGPGR--EHEAFEERRAWNQHLAKAGLTCLGWP 60 Query 62 TEYGGGGLSPMEQVVLAEEFARAGAPERAENDLLGIDLLGNTLIALGSEAQKRHFLPRIL 121 E+GG GLS +V EE+ARA AP++ + G +LLG TLIA G+ Q++ FLP+IL Sbjct 61 VEHGGRGLSTAHRVAFYEEYARADAPDKVNH--FGEELLGPTLIAFGTPEQQQRFLPKIL 118 Query 122 SGEHRWCQGFSEPEAGSDLASVRTRGVLDGDEWVINGHKIWTSAGTTANWIFLLARTDPS 181 WCQG+SEP AGSDLA+V T LDGD WVING K+WTS A W F++ART+ Sbjct 119 DVTELWCQGYSEPGAGSDLANVATTAELDGDHWVINGQKVWTSLAHWAQWCFVVARTEKG 178 Query 182 AAKHRGLSFLLVPMDQPGVVVRPIVNAAGHSSFSEVFLTDARTSAGNVVGRVGDGWSTAM 241 + +H GLS+LLVP+DQPGV VRPI+ G S F+EVF DART A VVG GDGW AM Sbjct 179 SKRHAGLSYLLVPLDQPGVEVRPIIQLTGDSEFNEVFFDDARTEANLVVGEPGDGWRVAM 238 Query 242 TLLGFERGSHIATAAIDFERDLQRLCELARDRGLHTDPRVRDGLAWCYARVQIMRYRGYR 301 L FERG I + R+L L ELA+ G DP +R+ L + ++ MR Sbjct 239 GTLTFERGVSTLGQQIRYARELSNLAELAQRTGAADDPFIRERLTRAWTGLRAMRSYALA 298 Query 302 DLTLALTGRPPGAEAAITKVIWSEYFRRYTDLAVEILGLEALGPRGPGNGGARLVPEAGT 361 + + PG + ++K++W+ + R +LA++++G PG L G Sbjct 299 TMDV----EQPGQD-NVSKLLWANWHRDLGELAMDVVG-------KPG-----LTLADGE 341 Query 362 PNSPACWMDELLYARAATIYAGSSQIQRNVIGERLLGLPKEPR 404 + W L++RA TIY GS++IQRN+I ER+LGLP+E + Sbjct 342 FDE---WQRLFLFSRADTIYGGSNEIQRNIIAERVLGLPREVK 381 >gi|315446185|ref|YP_004079064.1| acyl-CoA dehydrogenase [Mycobacterium sp. Spyr1] gi|315264488|gb|ADU01230.1| acyl-CoA dehydrogenase [Mycobacterium sp. Spyr1] Length=386 Score = 300 bits (767), Expect = 4e-79, Method: Compositional matrix adjust. Identities = 177/407 (44%), Positives = 240/407 (59%), Gaps = 34/407 (8%) Query 8 EAEAFRDRIREFVAEHLP------PGWPGPGALPPHEREEFARHWRRALAGAGLVAVSWP 61 E + FR +R+++AE+L G GPG HE E W + LA AGL + WP Sbjct 3 EVQKFRAEVRDWLAENLVGDFAALKGLGGPG--REHEAFEERLAWNQHLAAAGLTCLGWP 60 Query 62 TEYGGGGLSPMEQVVLAEEFARAGAPERAENDLLGIDLLGNTLIALGSEAQKRHFLPRIL 121 E+GG GLS +V EE+A+A AP++ + LG +LLG TLIA G+ Q++ FLPRIL Sbjct 61 EEHGGRGLSVAHRVAFYEEYAKANAPDKVNH--LGEELLGPTLIAYGTPEQQQRFLPRIL 118 Query 122 SGEHRWCQGFSEPEAGSDLASVRTRGVLDGDEWVINGHKIWTSAGTTANWIFLLARTDPS 181 W QG+SEP AGSDLA+V T LDGDEWVING K+WTS A W F++ART+ Sbjct 119 DVTELWSQGYSEPGAGSDLANVSTTATLDGDEWVINGQKVWTSLAHWAQWCFVVARTEKG 178 Query 182 AAKHRGLSFLLVPMDQPGVVVRPIVNAAGHSSFSEVFLTDARTSAGNVVGRVGDGWSTAM 241 + +H GLS+LLVP+ QPGV +RPI+ G S F+EVF DART+A VVG GDGW AM Sbjct 179 SKRHAGLSYLLVPLQQPGVEIRPIIQLTGDSEFNEVFFDDARTAADLVVGEPGDGWRVAM 238 Query 242 TLLGFERGSHIATAAIDFERDLQRLCELARDRGLHTDPRVRDGLAWCYARVQIMRYRGYR 301 L FERG I + R+ L ELA G DP +R+ L +A ++ M R Y Sbjct 239 GTLTFERGVSTLGQQIRYAREHSNLVELAEKTGAADDPLIRERLVRSWAGLKAM--RSYA 296 Query 302 DLTLALTGRPPGAEAA----ITKVIWSEYFRRYTDLAVEILGLEALGPRGPGNGGARLVP 357 T+ L G G+EAA ++K++W+ + R ++A++I G L +P Sbjct 297 LATMDLEG---GSEAAGKDSVSKLLWANWHRELGEIAMDIEGAAGL-----------TLP 342 Query 358 EAGTPNSPACWMDELLYARAATIYAGSSQIQRNVIGERLLGLPKEPR 404 + + W L++R+ TIY GS++IQRN+I ER+LGLP+E R Sbjct 343 DG----EFSEWQRLYLFSRSDTIYGGSNEIQRNIIAERVLGLPREAR 385 >gi|324997820|ref|ZP_08118932.1| acyl-CoA dehydrogenase domain-containing protein [Pseudonocardia sp. P1] Length=390 Score = 298 bits (764), Expect = 9e-79, Method: Compositional matrix adjust. Identities = 162/404 (41%), Positives = 232/404 (58%), Gaps = 17/404 (4%) Query 1 VDVSYPPEAEAFRDRIREFVAEHLPPGWPGPG---ALPPHEREEFARHWRRALAGAGLVA 57 +D+++ E FR +R +++ ++P W G +L E R W R A AG Sbjct 1 MDLTFTAAEEEFRSELRSWLSANIPQEWTRSGFWESLDDDESFRLRRDWERDKADAGFAG 60 Query 58 VSWPTEYGGGGLSPMEQVVLAEEFARAGAPERAENDLLGIDLLGNTLIALGSEAQKRHFL 117 + WPTEYGG G +P + + EE RA AP + LG+ L T++A+G++AQK+ + Sbjct 61 IQWPTEYGGRGGTPGMKAIYDEEMVRAHAPRTV--NPLGLTFLAPTVMAIGTDAQKKEII 118 Query 118 PRILSGEHRWCQGFSEPEAGSDLASVRTRGVLDGDEWVINGHKIWTSAGTTANWIFLLAR 177 +L E WCQGFSEP AGSDLA++ T+GV DGD++V+NG K+WT+ + IF + R Sbjct 119 GPLLRNEVVWCQGFSEPGAGSDLAALSTKGVRDGDDFVVNGQKVWTTNAVHGDKIFTMVR 178 Query 178 TDPSAAKHRGLSFLLVPMDQPGVVVRPIVNAAGHSSFSEVFLTDARTSAGNVVGRVGDGW 237 T+ + KHRG+S LL+ MDQPGV RP+ +G S F EVF DAR +A + +G +GDGW Sbjct 179 TEAGSEKHRGISMLLIDMDQPGVTARPLRQMSGASEFGEVFFDDARVAAADCLGEIGDGW 238 Query 238 STAMTLLGFERGSHIATAAIDFERDLQRLCELARDRGLHTDPRVRDGLAWCYARVQIMRY 297 TAM LL FERG+ + +F R + +AR G TDP VRD LA ++ ++ Sbjct 239 RTAMLLLSFERGASGISQYTEFRRQYDEIAAVARTLGRDTDPVVRDDLARVLTELECLKL 298 Query 298 RGYRDLTLALTGRPPGAEAAITKVIWSEYFRRYTDLAVEILGLEALGPRGPGNGGARLVP 357 LT GR G EA++TK+ WSE F+ ++ ILG A P G L P Sbjct 299 HSMHVLTQVEQGRDLGFEASMTKLQWSEAFQDLWEVYDRILGEHATLDTLP--DGTDLRP 356 Query 358 EAGTPNSPACWMDELLYARAATIYAGSSQIQRNVIGERLLGLPK 401 G + +++R+ TI+ GSSQ+QRN+ ER+LGLP+ Sbjct 357 LHG----------QAMWSRSVTIWGGSSQVQRNITAERVLGLPR 390 >gi|304312377|ref|YP_003811975.1| Predicted acyl-CoA dehydrogenase [gamma proteobacterium HdN1] gi|301798110|emb|CBL46332.1| Predicted acyl-CoA dehydrogenase [gamma proteobacterium HdN1] Length=398 Score = 298 bits (764), Expect = 9e-79, Method: Compositional matrix adjust. Identities = 166/415 (40%), Positives = 239/415 (58%), Gaps = 30/415 (7%) Query 1 VDVSYPPEAEAFRDRIREFVAEHLPP--------GWPGPGALPPHEREEFARHWRRALAG 52 + +S+ + E FR + ++ +L G PG + P ER +HW + LA Sbjct 1 MKLSFSDQDELFRKEVAAWLTTNLSGEFTKLRFRGGPGDEHMFPEER----KHWEQKLAE 56 Query 53 AGLVAVSWPTEYGGGGLSPMEQVVLAEEFARAGAPERAENDLLGIDLLGNTLIALGSEAQ 112 G + WP EYGG G + +QV+ EE+ARAGAP R + +G L G TLIA GSEAQ Sbjct 57 GGWTCIGWPKEYGGRGCTIEKQVIFFEEYARAGAPGRVGH--IGEGLAGPTLIAFGSEAQ 114 Query 113 KRHFLPRILSGEHRWCQGFSEPEAGSDLASVRTRGVLDGDE--WVINGHKIWTSAGTTAN 170 K+ +LP I +G+ WCQG+SEP AGSDLA+V+TR D ++ W++NG K+WTS A+ Sbjct 115 KQKYLPGIRAGKELWCQGYSEPSAGSDLANVKTRARFDAEKGKWILNGQKVWTSLAHEAD 174 Query 171 WIFLLARTDPSAAKHRGLSFLLVPMDQPGVVVRPIVNAAGHSSFSEVFLTDARTSAGNVV 230 + F++ARTDP + H+GL F LV M QPG+ VRPI G S F+EVF +A A ++V Sbjct 175 YCFVIARTDPESKAHKGLGFFLVNMHQPGIEVRPIQQITGTSEFNEVFFDNAECDADDIV 234 Query 231 GRVGDGWSTAMTLLGFERGSHIATAAIDFERDLQRLCELARDRGLHTDPRVRDGLAWCYA 290 G G+GW AM LLGFERG + F+ +L + +AR+ G +P +R +A +A Sbjct 235 GAPGEGWKVAMGLLGFERGVSTLGQQMQFQNELNEIIRIARENGASKNPVLRQRIAKAHA 294 Query 291 RVQIMRYRGYRDLT-LALTGRPPGAEAAITKVIWSEYFRRYTDLAVEILGLEALGPRGPG 349 ++IMRY R L+ A + EA I K+ W+ + R +LA+++LG E Sbjct 295 ELKIMRYNSMRMLSGSAWSDGSLQKEALIYKLFWASWHRELGELAMDVLGPEC------- 347 Query 350 NGGARLVPEAGTPNSPACWMDELLYARAATIYAGSSQIQRNVIGERLLGLPKEPR 404 + EA P + L+ R+ TIY G+++IQRN+I ER LG+PKE + Sbjct 348 -----EILEA-APYQLSRLQAMYLFVRSDTIYGGTNEIQRNIIAERGLGMPKEAK 396 >gi|54022448|ref|YP_116690.1| putative acyl-CoA dehydrogenase [Nocardia farcinica IFM 10152] gi|54013956|dbj|BAD55326.1| putative acyl-CoA dehydrogenase [Nocardia farcinica IFM 10152] Length=396 Score = 298 bits (764), Expect = 9e-79, Method: Compositional matrix adjust. Identities = 174/401 (44%), Positives = 233/401 (59%), Gaps = 27/401 (6%) Query 11 AFRDRIREFVAEHLPP------GWPGPGALPPHEREEFARHWRRALAGAGLVAVSWPTEY 64 AF +RE++AE+L G GPG HE + W R LA AG + WP EY Sbjct 17 AFCAEVREWLAENLDGEFRELRGLGGPG--REHEAFDERLAWDRHLAAAGWTCLGWPKEY 74 Query 65 GGGGLSPMEQVVLAEEFARAGAPERAENDLLGIDLLGNTLIALGSEAQKRHFLPRILSGE 124 GG S +QV+ EE+ARA AP R + +G +LLG TL+A G+EAQK+ FLP I + Sbjct 75 GGREASVRQQVIFHEEYARANAPARVSH--VGEELLGPTLLAFGTEAQKQRFLPGIRTVS 132 Query 125 HRWCQGFSEPEAGSDLASVRTRGVLDGDEWVINGHKIWTSAGTTANWIFLLARTDPSAAK 184 WCQG+SEP AGSDLA++ T LDGD+W ING KIWTS A+W F++ART+ +++ Sbjct 133 ELWCQGYSEPGAGSDLAAITTAAHLDGDQWSINGQKIWTSLAHVADWCFVVARTEKGSSR 192 Query 185 HRGLSFLLVPMDQPGVVVRPIVNAAGHSSFSEVFLTDARTSAGNVVGRVGDGWSTAMTLL 244 H+GLS+LLVPM QPGV VRPI+ G S F+EVF DART A VVG GDGW AM L Sbjct 193 HKGLSYLLVPMKQPGVEVRPIIQLTGTSEFNEVFFDDARTDADLVVGEPGDGWKVAMGTL 252 Query 245 GFERGSHIATAAIDFERDLQRLCELARDRGLHTDPRVRDGLAWCYARVQIMRYRGYRDLT 304 ERG I F R+L + LAR G DP + D + + ++++R R T Sbjct 253 AVERGISTLGQQIRFARELADIEALARRTGAADDPLIADRIDRAWVGLRVLRAHALR--T 310 Query 305 LALTGRPPGAEAAITKVIWSEYFRRYTDLAVEILGLEALGPRGPGNGGARLVPEAGTPNS 364 + G +A++ K++W+ + R +LA+ + G E LV G + Sbjct 311 MEGGGIDESGQASVAKLLWANWHRGLGELAMAVRGAEG------------LVAGEGDLDE 358 Query 365 PACWMDELLYARAATIYAGSSQIQRNVIGERLLGLPKEPRP 405 W L+ RA TIY GS+++QRN+I ER+LGLP+E RP Sbjct 359 ---WQRLYLFTRADTIYGGSNEVQRNIIAERVLGLPREARP 396 >gi|343924358|ref|ZP_08763908.1| putative acyl-CoA dehydrogenase [Gordonia alkanivorans NBRC 16433] gi|343765690|dbj|GAA10834.1| putative acyl-CoA dehydrogenase [Gordonia alkanivorans NBRC 16433] Length=419 Score = 298 bits (763), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 176/412 (43%), Positives = 238/412 (58%), Gaps = 22/412 (5%) Query 4 SYPPEAEAFRDRIREFVAEHLP------PGWPGPGALPPHEREEFARH--WRRALAGAGL 55 S P A+ F +R ++ E+L G GPG+ E E FA W R LA AG Sbjct 19 STPNAADEFAAAVRSWLDENLTGDFAHLKGRGGPGS----EHEFFAERLAWDRHLASAGW 74 Query 56 VAVSWPTEYGGGGLSPMEQVVLAEEFARAGAPERAENDLLGIDLLGNTLIALGSEAQKRH 115 + WPTEYGG G + ++++ E+ARA AP R + LG +LLG TLI G++ QK Sbjct 75 TCIGWPTEYGGRGATLEQRIIFHREYARANAPARVNH--LGEELLGPTLIEYGTDEQKER 132 Query 116 FLPRILSGEHRWCQGFSEPEAGSDLASVRTRGVLDGDEWVINGHKIWTSAGTTANWIFLL 175 FLP I+ W QG+SEP AGSDLA V T LD +W+ING KIWTS A W+F++ Sbjct 133 FLPGIVDVTELWSQGYSEPGAGSDLAGVSTSARLDDGKWIINGQKIWTSLAHVAQWVFVI 192 Query 176 ARTDPSAAKHRGLSFLLVPMDQPGVVVRPIVNAAGHSSFSEVFLTDARTSAGNVVGRVGD 235 ART+ +A+H GLSFLLVP++QPGV VRPI G S F+EVF DA T A +VG GD Sbjct 193 ARTEKGSARHAGLSFLLVPLEQPGVTVRPIQQLTGTSEFNEVFFDDATTDADLIVGEPGD 252 Query 236 GWSTAMTLLGFERGSHIATAAIDFERDLQRLCELARDRGLHTDPRVRDGLAWCYARVQIM 295 GW AM LL FERG + F R+L+ L E+AR G DP + LA +++M Sbjct 253 GWKVAMGLLQFERGVSTLGQQVGFARELENLTEVARASGAVADPELASRLARADIGLKVM 312 Query 296 RYRGYRDLTLALTGRPPGAEAAITKVIWSEYFRRYTDLAVEILGLEAL-GPRGPGNGGAR 354 R R L +T + A+++K++W+ + R +LA++++G AL GP G Sbjct 313 RAHAQRTLDGDVTSQ--AGAASVSKLLWANWHRDLGELAMDVVGAPALIGPDATAEGQPN 370 Query 355 LV--PEAGTPNSPACWMDELLYARAATIYAGSSQIQRNVIGERLLGLPKEPR 404 + PE + W L+ RA TIY GS+++QRN+I ER+LGLP+E R Sbjct 371 DIADPEHVELDE---WQRLYLFTRADTIYGGSNEVQRNIIAERVLGLPREAR 419 Lambda K H 0.320 0.138 0.435 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 816290083944 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40