BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv1942c
Length=109
Score E
Sequences producing significant alignments: (Bits) Value
gi|15841413|ref|NP_336450.1| hypothetical protein MT1992 [Mycoba... 207 5e-52
gi|15609079|ref|NP_216458.1| hypothetical protein Rv1942c [Mycob... 206 8e-52
gi|308369568|ref|ZP_07418288.2| toxin [Mycobacterium tuberculosi... 190 7e-47
gi|323719559|gb|EGB28684.1| toxin protein [Mycobacterium tubercu... 178 2e-43
gi|284991043|ref|YP_003409597.1| transcriptional modulator of Ma... 176 7e-43
gi|108802468|ref|YP_642664.1| transcriptional modulator of MazE/... 140 5e-32
gi|289570028|ref|ZP_06450255.1| conserved hypothetical protein [... 84.7 4e-15
gi|333992022|ref|YP_004524636.1| PemK-like protein [Mycobacteriu... 80.1 1e-13
gi|94266554|ref|ZP_01290240.1| PemK-like protein [delta proteoba... 68.9 2e-10
gi|167044217|gb|ABZ08898.1| putative PemK-like protein [uncultur... 67.8 5e-10
gi|297568724|ref|YP_003690068.1| transcriptional modulator of Ma... 61.2 5e-08
gi|340625678|ref|YP_004744130.1| hypothetical protein MCAN_06581... 58.2 4e-07
gi|15607799|ref|NP_215173.1| hypothetical protein Rv0659c [Mycob... 55.1 3e-06
gi|308379835|ref|ZP_07487770.2| toxin [Mycobacterium tuberculosi... 54.7 4e-06
gi|111025169|ref|YP_707589.1| growth inhibitor PemK [Rhodococcus... 53.1 1e-05
gi|333989865|ref|YP_004522479.1| hypothetical protein JDM601_122... 52.0 3e-05
gi|284030849|ref|YP_003380780.1| transcriptional modulator of Ma... 50.4 9e-05
gi|31792295|ref|NP_854788.1| hypothetical protein Mb1132c [Mycob... 48.5 3e-04
gi|289583045|ref|YP_003481511.1| MazF family transcriptional reg... 48.1 5e-04
gi|308370063|ref|ZP_07420166.2| toxin [Mycobacterium tuberculosi... 47.8 6e-04
gi|15608242|ref|NP_215618.1| hypothetical protein Rv1102c [Mycob... 47.8 6e-04
gi|320326762|gb|EFW82805.1| plasmid maintenance protein [Pseudom... 47.4 7e-04
gi|284042400|ref|YP_003392740.1| MazF family transcriptional reg... 47.4 8e-04
gi|317125701|ref|YP_004099813.1| PemK family protein [Intraspora... 47.0 9e-04
gi|313677683|ref|YP_004055679.1| transcriptional modulator of ma... 47.0 0.001
gi|345005711|ref|YP_004808564.1| transcriptional modulator of Ma... 47.0 0.001
gi|311745739|ref|ZP_07719524.1| toxin-antitoxin system, toxin co... 46.2 0.002
gi|110668140|ref|YP_657951.1| PemK-like growth inhibitor protein... 45.1 0.004
gi|339729055|emb|CCC40264.1| PemK domain protein [Haloquadratum ... 44.7 0.005
gi|166363781|ref|YP_001656054.1| PemK-like protein [Microcystis ... 44.3 0.007
gi|344219327|gb|AEM99957.1| hypothetical protein MTCTRI2_1534 [M... 43.9 0.007
gi|344201304|ref|YP_004785630.1| transcriptional modulator of Ma... 43.5 0.009
gi|159027339|emb|CAO90524.1| unnamed protein product [Microcysti... 43.5 0.010
gi|111225278|ref|YP_716072.1| hypothetical protein FRAAL5929 [Fr... 43.5 0.010
gi|153869667|ref|ZP_01999211.1| conserved hypothetical protein [... 43.1 0.012
gi|256848378|ref|ZP_05553821.1| regulatory protein [Lactobacillu... 43.1 0.014
gi|158335749|ref|YP_001516921.1| hypothetical protein AM1_2600 [... 43.1 0.014
gi|186682027|ref|YP_001865223.1| MazF family transcripitonal reg... 43.1 0.014
gi|148264060|ref|YP_001230766.1| transcriptional modulator of Ma... 42.7 0.016
gi|282882941|ref|ZP_06291546.1| toxin-antitoxin system, toxin co... 42.7 0.018
gi|15608633|ref|NP_216011.1| hypothetical protein Rv1495 [Mycoba... 42.7 0.020
gi|289753579|ref|ZP_06512957.1| conserved hypothetical protein [... 42.7 0.020
gi|308270639|emb|CBX27251.1| Uncharacterized protein Rv1991c/MT2... 42.4 0.021
gi|251772678|gb|EES53242.1| transcriptional modulator of MazE/to... 42.4 0.024
gi|336173464|ref|YP_004580602.1| transcriptional modulator of Ma... 42.0 0.028
gi|302547010|ref|ZP_07299352.1| conserved hypothetical protein [... 42.0 0.029
gi|333979032|ref|YP_004516977.1| transcriptional modulator of Ma... 42.0 0.033
gi|17227833|ref|NP_484381.1| hypothetical protein all0337 [Nosto... 41.6 0.037
gi|302546980|ref|ZP_07299322.1| conserved hypothetical protein [... 41.6 0.044
gi|302555807|ref|ZP_07308149.1| conserved hypothetical protein [... 41.2 0.050
>gi|15841413|ref|NP_336450.1| hypothetical protein MT1992 [Mycobacterium tuberculosis CDC1551]
gi|254232113|ref|ZP_04925440.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
gi|13881650|gb|AAK46264.1| hypothetical protein MT1992 [Mycobacterium tuberculosis CDC1551]
gi|124601172|gb|EAY60182.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
Length=117
Score = 207 bits (526), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 109/109 (100%), Positives = 109/109 (100%), Gaps = 0/109 (0%)
Query 1 VTALPARGEVWWCEMAEIGRRPVVVLSRDAAIPRLRRALVAPCTTTIRGLASEVVLEPGS 60
VTALPARGEVWWCEMAEIGRRPVVVLSRDAAIPRLRRALVAPCTTTIRGLASEVVLEPGS
Sbjct 9 VTALPARGEVWWCEMAEIGRRPVVVLSRDAAIPRLRRALVAPCTTTIRGLASEVVLEPGS 68
Query 61 DPIPRRSAVNLDSVESVSVAVLVNRLGRLADIRMRAICTALEVAVDCSR 109
DPIPRRSAVNLDSVESVSVAVLVNRLGRLADIRMRAICTALEVAVDCSR
Sbjct 69 DPIPRRSAVNLDSVESVSVAVLVNRLGRLADIRMRAICTALEVAVDCSR 117
>gi|15609079|ref|NP_216458.1| hypothetical protein Rv1942c [Mycobacterium tuberculosis H37Rv]
gi|31793134|ref|NP_855627.1| hypothetical protein Mb1977c [Mycobacterium bovis AF2122/97]
gi|121637847|ref|YP_978070.1| hypothetical protein BCG_1981c [Mycobacterium bovis BCG str.
Pasteur 1173P2]
67 more sequence titles
Length=109
Score = 206 bits (525), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 108/109 (99%), Positives = 109/109 (100%), Gaps = 0/109 (0%)
Query 1 VTALPARGEVWWCEMAEIGRRPVVVLSRDAAIPRLRRALVAPCTTTIRGLASEVVLEPGS 60
+TALPARGEVWWCEMAEIGRRPVVVLSRDAAIPRLRRALVAPCTTTIRGLASEVVLEPGS
Sbjct 1 MTALPARGEVWWCEMAEIGRRPVVVLSRDAAIPRLRRALVAPCTTTIRGLASEVVLEPGS 60
Query 61 DPIPRRSAVNLDSVESVSVAVLVNRLGRLADIRMRAICTALEVAVDCSR 109
DPIPRRSAVNLDSVESVSVAVLVNRLGRLADIRMRAICTALEVAVDCSR
Sbjct 61 DPIPRRSAVNLDSVESVSVAVLVNRLGRLADIRMRAICTALEVAVDCSR 109
>gi|308369568|ref|ZP_07418288.2| toxin [Mycobacterium tuberculosis SUMu002]
gi|308370871|ref|ZP_07423023.2| toxin [Mycobacterium tuberculosis SUMu003]
gi|308402959|ref|ZP_07493677.2| toxin [Mycobacterium tuberculosis SUMu012]
gi|308327162|gb|EFP16013.1| toxin [Mycobacterium tuberculosis SUMu002]
gi|308330598|gb|EFP19449.1| toxin [Mycobacterium tuberculosis SUMu003]
gi|308365868|gb|EFP54719.1| toxin [Mycobacterium tuberculosis SUMu012]
Length=100
Score = 190 bits (482), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 99/100 (99%), Positives = 100/100 (100%), Gaps = 0/100 (0%)
Query 10 VWWCEMAEIGRRPVVVLSRDAAIPRLRRALVAPCTTTIRGLASEVVLEPGSDPIPRRSAV 69
+WWCEMAEIGRRPVVVLSRDAAIPRLRRALVAPCTTTIRGLASEVVLEPGSDPIPRRSAV
Sbjct 1 MWWCEMAEIGRRPVVVLSRDAAIPRLRRALVAPCTTTIRGLASEVVLEPGSDPIPRRSAV 60
Query 70 NLDSVESVSVAVLVNRLGRLADIRMRAICTALEVAVDCSR 109
NLDSVESVSVAVLVNRLGRLADIRMRAICTALEVAVDCSR
Sbjct 61 NLDSVESVSVAVLVNRLGRLADIRMRAICTALEVAVDCSR 100
>gi|323719559|gb|EGB28684.1| toxin protein [Mycobacterium tuberculosis CDC1551A]
Length=95
Score = 178 bits (452), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 95/95 (100%), Positives = 95/95 (100%), Gaps = 0/95 (0%)
Query 15 MAEIGRRPVVVLSRDAAIPRLRRALVAPCTTTIRGLASEVVLEPGSDPIPRRSAVNLDSV 74
MAEIGRRPVVVLSRDAAIPRLRRALVAPCTTTIRGLASEVVLEPGSDPIPRRSAVNLDSV
Sbjct 1 MAEIGRRPVVVLSRDAAIPRLRRALVAPCTTTIRGLASEVVLEPGSDPIPRRSAVNLDSV 60
Query 75 ESVSVAVLVNRLGRLADIRMRAICTALEVAVDCSR 109
ESVSVAVLVNRLGRLADIRMRAICTALEVAVDCSR
Sbjct 61 ESVSVAVLVNRLGRLADIRMRAICTALEVAVDCSR 95
>gi|284991043|ref|YP_003409597.1| transcriptional modulator of MazE/toxin, MazF [Geodermatophilus
obscurus DSM 43160]
gi|284064288|gb|ADB75226.1| transcriptional modulator of MazE/toxin, MazF [Geodermatophilus
obscurus DSM 43160]
Length=109
Score = 176 bits (447), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 91/108 (85%), Positives = 95/108 (88%), Gaps = 0/108 (0%)
Query 1 VTALPARGEVWWCEMAEIGRRPVVVLSRDAAIPRLRRALVAPCTTTIRGLASEVVLEPGS 60
+T LPARGEVWWCEMAEIGRRPVVVLSRDA IPR RRALVAPCTTTIRGL SEV LEPG
Sbjct 1 MTTLPARGEVWWCEMAEIGRRPVVVLSRDAVIPRHRRALVAPCTTTIRGLVSEVGLEPGE 60
Query 61 DPIPRRSAVNLDSVESVSVAVLVNRLGRLADIRMRAICTALEVAVDCS 108
DP+PRR VN+DSVESVSVAVLV RLGRLAD RMR IC AL VAVDC+
Sbjct 61 DPVPRRCVVNMDSVESVSVAVLVERLGRLADTRMRQICGALAVAVDCA 108
>gi|108802468|ref|YP_642664.1| transcriptional modulator of MazE/toxin, MazF [Mycobacterium
sp. MCS]
gi|119855295|ref|YP_935898.1| transcriptional modulator of MazE/toxin, MazF [Mycobacterium
sp. KMS]
gi|108772887|gb|ABG11608.1| transcriptional modulator of MazE/toxin, MazF [Mycobacterium
sp. MCS]
gi|119698012|gb|ABL95083.1| transcriptional modulator of MazE/toxin, MazF [Mycobacterium
sp. KMS]
Length=107
Score = 140 bits (354), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 73/92 (80%), Positives = 78/92 (85%), Gaps = 0/92 (0%)
Query 4 LPARGEVWWCEMAEIGRRPVVVLSRDAAIPRLRRALVAPCTTTIRGLASEVVLEPGSDPI 63
LPARGE+WWCE AE RPVVVLSRD AIPRLRR LVAPCTTT+RGLASEVVL PG DP+
Sbjct 3 LPARGELWWCETAEAEPRPVVVLSRDVAIPRLRRVLVAPCTTTVRGLASEVVLTPGDDPV 62
Query 64 PRRSAVNLDSVESVSVAVLVNRLGRLADIRMR 95
P+R+AVNLD VESV VA L RLGRLAD RMR
Sbjct 63 PQRAAVNLDLVESVPVAALGTRLGRLADERMR 94
>gi|289570028|ref|ZP_06450255.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
gi|289543782|gb|EFD47430.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
Length=47
Score = 84.7 bits (208), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/47 (92%), Positives = 44/47 (94%), Gaps = 0/47 (0%)
Query 1 VTALPARGEVWWCEMAEIGRRPVVVLSRDAAIPRLRRALVAPCTTTI 47
+TALPARGEVWWCEMAEIGRRPVVVLSRDAAIPRLRRALVAP T I
Sbjct 1 MTALPARGEVWWCEMAEIGRRPVVVLSRDAAIPRLRRALVAPPATRI 47
>gi|333992022|ref|YP_004524636.1| PemK-like protein [Mycobacterium sp. JDM601]
gi|333487990|gb|AEF37382.1| PemK-like protein [Mycobacterium sp. JDM601]
Length=103
Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/101 (43%), Positives = 62/101 (62%), Gaps = 1/101 (0%)
Query 7 RGEVWWCEMAEIGRRPVVVLSRDAAIPRLRRALVAPCTTTIRGLASEVVLEPGSDPIPRR 66
RGEVWW ++ RPV+VL+R RL LVAP TTT+R + +EV L+ +D +PR+
Sbjct 4 RGEVWWADVPGDKIRPVLVLTRQRFTSRLTSLLVAPVTTTVRNIPTEVALDR-ADGLPRQ 62
Query 67 SAVNLDSVESVSVAVLVNRLGRLADIRMRAICTALEVAVDC 107
A N D+V ++ + +R+ RLAD R+ +C A AV C
Sbjct 63 CAANFDNVFTLGRSRFTSRIARLADERLSEVCRAYRFAVGC 103
>gi|94266554|ref|ZP_01290240.1| PemK-like protein [delta proteobacterium MLMS-1]
gi|93452829|gb|EAT03355.1| PemK-like protein [delta proteobacterium MLMS-1]
Length=103
Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/101 (41%), Positives = 62/101 (62%), Gaps = 2/101 (1%)
Query 7 RGEVWWCEMAE-IGRRPVVVLSRDAAIPRLRRALVAPCTTTIRGLASEVVLEPGSDPIPR 65
RGEV W + +RPV++LSRD+ I L VAP T TIR + SEV+L +D +P+
Sbjct 3 RGEVRWYKFGRPDKKRPVLILSRDSIIEYLGEVTVAPITGTIRDIPSEVLLS-RADGLPK 61
Query 66 RSAVNLDSVESVSVAVLVNRLGRLADIRMRAICTALEVAVD 106
AVN D +++V+ + L +RL L +RM+ + A+ A+D
Sbjct 62 ECAVNCDHLQTVTKSKLGSRLATLPAVRMQEVGRAIHFALD 102
>gi|167044217|gb|ABZ08898.1| putative PemK-like protein [uncultured marine microorganism HF4000_APKG5H11]
Length=105
Score = 67.8 bits (164), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 61/100 (61%), Gaps = 2/100 (2%)
Query 7 RGEVWWCEMAEIG-RRPVVVLSRDAAIPRLRRALVAPCTTTIRGLASEVVLEPGSDPIPR 65
RG++WW E+ G RPVV++SRD+A VAP T +R L EV+L P D +P+
Sbjct 3 RGQLWWAELPPPGGHRPVVLISRDSAYSVREFITVAPVTARVRRLPIEVLLGP-HDGLPQ 61
Query 66 RSAVNLDSVESVSVAVLVNRLGRLADIRMRAICTALEVAV 105
SA NLDS+ ++ + + + + L+D ++RA+ A+ A+
Sbjct 62 NSAANLDSMLTIPKSSIHDYIASLSDDKVRAVDAAIHFAL 101
>gi|297568724|ref|YP_003690068.1| transcriptional modulator of MazE/toxin, MazF [Desulfurivibrio
alkaliphilus AHT2]
gi|296924639|gb|ADH85449.1| transcriptional modulator of MazE/toxin, MazF [Desulfurivibrio
alkaliphilus AHT2]
Length=104
Score = 61.2 bits (147), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/101 (35%), Positives = 58/101 (58%), Gaps = 1/101 (0%)
Query 7 RGEVWWCEMAE-IGRRPVVVLSRDAAIPRLRRALVAPCTTTIRGLASEVVLEPGSDPIPR 65
RGE+ W + A +RPV++L+RD+ + L +AP TTT+R + SEV L +D +PR
Sbjct 3 RGEIRWYKFAAPDKKRPVLILTRDSVLEYLGEVTIAPITTTVRDIPSEVFLSAVNDGVPR 62
Query 66 RSAVNLDSVESVSVAVLVNRLGRLADIRMRAICTALEVAVD 106
A+N D +++VS + + L +M + A+ A+D
Sbjct 63 DCALNCDHLQTVSKGKIGPLVTSLPRNKMLEVGRAIRFALD 103
>gi|340625678|ref|YP_004744130.1| hypothetical protein MCAN_06581 [Mycobacterium canettii CIPT
140010059]
gi|340003868|emb|CCC42998.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059]
Length=102
Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/101 (34%), Positives = 50/101 (50%), Gaps = 1/101 (0%)
Query 7 RGEVWWCEMAEIGRRPVVVLSRDAAIPRLRRALVAPCTTTIRGLASEVVLEPGSDPIPRR 66
RGE+W+ G RPV+VL+RD R+ +V T T RGL SE+ L D +P
Sbjct 3 RGELWFAATPG-GDRPVLVLTRDPVADRIGAVVVVALTRTRRGLVSELELTAAEDRVPSD 61
Query 67 SAVNLDSVESVSVAVLVNRLGRLADIRMRAICTALEVAVDC 107
VN D++ ++ R+ RL+ R+ C L + C
Sbjct 62 CVVNFDNIHTLPRTAFRRRITRLSPARLHEACQTLRASTGC 102
>gi|15607799|ref|NP_215173.1| hypothetical protein Rv0659c [Mycobacterium tuberculosis H37Rv]
gi|15840062|ref|NP_335099.1| hypothetical protein MT0688 [Mycobacterium tuberculosis CDC1551]
gi|31791843|ref|NP_854336.1| hypothetical protein Mb0678c [Mycobacterium bovis AF2122/97]
75 more sequence titles
Length=102
Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/101 (33%), Positives = 50/101 (50%), Gaps = 1/101 (0%)
Query 7 RGEVWWCEMAEIGRRPVVVLSRDAAIPRLRRALVAPCTTTIRGLASEVVLEPGSDPIPRR 66
RGE+W+ G RPV+VL+RD R+ +V T T RGL SE+ L + +P
Sbjct 3 RGELWFAATPG-GDRPVLVLTRDPVADRIGAVVVVALTRTRRGLVSELELTAVENRVPSD 61
Query 67 SAVNLDSVESVSVAVLVNRLGRLADIRMRAICTALEVAVDC 107
VN D++ ++ R+ RL+ R+ C L + C
Sbjct 62 CVVNFDNIHTLPRTAFRRRITRLSPARLHEACQTLRASTGC 102
>gi|308379835|ref|ZP_07487770.2| toxin [Mycobacterium tuberculosis SUMu011]
gi|308363397|gb|EFP52248.1| toxin [Mycobacterium tuberculosis SUMu011]
Length=118
Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/101 (33%), Positives = 50/101 (50%), Gaps = 1/101 (0%)
Query 7 RGEVWWCEMAEIGRRPVVVLSRDAAIPRLRRALVAPCTTTIRGLASEVVLEPGSDPIPRR 66
RGE+W+ G RPV+VL+RD R+ +V T T RGL SE+ L + +P
Sbjct 19 RGELWFAATPG-GDRPVLVLTRDPVADRIGAVVVVALTRTRRGLVSELELTAVENRVPSD 77
Query 67 SAVNLDSVESVSVAVLVNRLGRLADIRMRAICTALEVAVDC 107
VN D++ ++ R+ RL+ R+ C L + C
Sbjct 78 CVVNFDNIHTLPRTAFRRRITRLSPARLHEACQTLRASTGC 118
>gi|111025169|ref|YP_707589.1| growth inhibitor PemK [Rhodococcus jostii RHA1]
gi|110824148|gb|ABG99431.1| probable growth inhibitor PemK [Rhodococcus jostii RHA1]
Length=99
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/86 (38%), Positives = 52/86 (61%), Gaps = 1/86 (1%)
Query 21 RPVVVLSRDAAIPRLRRALVAPCTTTIRGLASEVVLEPGSDPIPRRSAVNLDSVESVSVA 80
RPV+VL+R+ P L R VAP T T+RGL++EV + P ++ + + S V+ D++ ++ V+
Sbjct 13 RPVLVLTRELVRPHLSRVTVAPITGTVRGLSTEVPVGP-ANGLEKESVVSCDNIVTIPVS 71
Query 81 VLVNRLGRLADIRMRAICTALEVAVD 106
L LG + A+ TA+ A D
Sbjct 72 ALGRGLGFFFPSQEAALTTAIRAAFD 97
>gi|333989865|ref|YP_004522479.1| hypothetical protein JDM601_1225 [Mycobacterium sp. JDM601]
gi|333485833|gb|AEF35225.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=103
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/94 (35%), Positives = 57/94 (61%), Gaps = 2/94 (2%)
Query 14 EMAEIGR-RPVVVLSRDAAIPRLRRALVAPCTTTIRGLASEVVLEPGSDPIPRRSAVNLD 72
+A++ R RPV++L+ + P L VAP TTT+RGL++E + ++ + + S V+ D
Sbjct 5 HIAQLDRARPVLILTHEVVRPHLTNVTVAPITTTVRGLSTEFPVG-AANGLNQPSVVSCD 63
Query 73 SVESVSVAVLVNRLGRLADIRMRAICTALEVAVD 106
++++V VA L ++G L D + A+ A+ A D
Sbjct 64 NIQTVPVADLGRQIGYLFDSQEPALADAIGNAFD 97
>gi|284030849|ref|YP_003380780.1| transcriptional modulator of MazE/toxin, MazF [Kribbella flavida
DSM 17836]
gi|283810142|gb|ADB31981.1| transcriptional modulator of MazE/toxin, MazF [Kribbella flavida
DSM 17836]
Length=101
Score = 50.4 bits (119), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/88 (36%), Positives = 53/88 (61%), Gaps = 1/88 (1%)
Query 21 RPVVVLSRDAAIPRLRRALVAPCTTTIRGLASEVVLEPGSDPIPRRSAVNLDSVESVSVA 80
RPVVVL+R+ PRL VAP T+T+RGL++EV++ P + + SA++ D+++++
Sbjct 13 RPVVVLTRELIRPRLTNVTVAPITSTVRGLSTEVLVGPQNG-LDHPSAISCDNIQTIPKL 71
Query 81 VLVNRLGRLADIRMRAICTALEVAVDCS 108
L +G L + A+ A+ +A D
Sbjct 72 QLGRLIGYLLPDQEPALTEAVTLAFDLD 99
>gi|31792295|ref|NP_854788.1| hypothetical protein Mb1132c [Mycobacterium bovis AF2122/97]
gi|121637033|ref|YP_977256.1| hypothetical protein BCG_1162c [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|224989506|ref|YP_002644193.1| hypothetical protein JTY_1135 [Mycobacterium bovis BCG str. Tokyo
172]
27 more sequence titles
Length=103
Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/94 (33%), Positives = 57/94 (61%), Gaps = 2/94 (2%)
Query 14 EMAEIGR-RPVVVLSRDAAIPRLRRALVAPCTTTIRGLASEVVLEPGSDPIPRRSAVNLD 72
+A++ + RPV++L+R+ P L VAP TTT+RGLA+EV ++ + + + S V+ D
Sbjct 5 HIAQLDKARPVLILTREVVRPHLTNVTVAPITTTVRGLATEVPVD-AVNGLNQPSVVSCD 63
Query 73 SVESVSVAVLVNRLGRLADIRMRAICTALEVAVD 106
+++++ V L ++G L + A+ A+ A D
Sbjct 64 NIQTIPVCDLGRQIGYLLASQEPALAEAIGNAFD 97
>gi|289583045|ref|YP_003481511.1| MazF family transcriptional regulator [Natrialba magadii ATCC
43099]
gi|289532598|gb|ADD06949.1| transcriptional modulator of MazE/toxin, MazF [Natrialba magadii
ATCC 43099]
Length=117
Score = 48.1 bits (113), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/102 (34%), Positives = 50/102 (50%), Gaps = 7/102 (6%)
Query 5 PARGEVWWCEMAEIGRRPVVVLSRDAAIPRLRRALVAPCTTTIRGLASEVVLEPGSDPIP 64
PA G EM + RP VV+ D +VAP T T RG EV++E P
Sbjct 19 PAEGH----EMKKT--RPAVVVQNDVGNKNASTTIVAPATGTYRGYPFEVLVEAAKSPFE 72
Query 65 RRSAVNLDSVESVSVAVLVNR-LGRLADIRMRAICTALEVAV 105
+ S++ LD V VS+ ++ LG L M A+ AL++++
Sbjct 73 KDSSIRLDQVRVVSIEKRIHSVLGSLDTETMEAVDEALKLSL 114
>gi|308370063|ref|ZP_07420166.2| toxin [Mycobacterium tuberculosis SUMu002]
gi|308373036|ref|ZP_07430806.2| toxin [Mycobacterium tuberculosis SUMu005]
gi|308325465|gb|EFP14316.1| toxin [Mycobacterium tuberculosis SUMu002]
gi|308338998|gb|EFP27849.1| toxin [Mycobacterium tuberculosis SUMu005]
Length=104
Score = 47.8 bits (112), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/94 (33%), Positives = 56/94 (60%), Gaps = 2/94 (2%)
Query 14 EMAEIGR-RPVVVLSRDAAIPRLRRALVAPCTTTIRGLASEVVLEPGSDPIPRRSAVNLD 72
+A++ + RPV++L+R+ P L VAP TTT+RGLA+EV ++ + + + S V+ D
Sbjct 6 HIAQLDKARPVLILTREVVRPHLTNVTVAPITTTVRGLATEVPVD-AVNGLNQPSVVSCD 64
Query 73 SVESVSVAVLVNRLGRLADIRMRAICTALEVAVD 106
+ +++ V L ++G L + A+ A+ A D
Sbjct 65 NTQTIPVCDLGRQIGYLLASQEPALAEAIGNAFD 98
>gi|15608242|ref|NP_215618.1| hypothetical protein Rv1102c [Mycobacterium tuberculosis H37Rv]
gi|15840541|ref|NP_335578.1| hypothetical protein MT1134 [Mycobacterium tuberculosis CDC1551]
gi|148660888|ref|YP_001282411.1| hypothetical protein MRA_1113 [Mycobacterium tuberculosis H37Ra]
44 more sequence titles
Length=103
Score = 47.8 bits (112), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/94 (33%), Positives = 56/94 (60%), Gaps = 2/94 (2%)
Query 14 EMAEIGR-RPVVVLSRDAAIPRLRRALVAPCTTTIRGLASEVVLEPGSDPIPRRSAVNLD 72
+A++ + RPV++L+R+ P L VAP TTT+RGLA+EV ++ + + + S V+ D
Sbjct 5 HIAQLDKARPVLILTREVVRPHLTNVTVAPITTTVRGLATEVPVD-AVNGLNQPSVVSCD 63
Query 73 SVESVSVAVLVNRLGRLADIRMRAICTALEVAVD 106
+ +++ V L ++G L + A+ A+ A D
Sbjct 64 NTQTIPVCDLGRQIGYLLASQEPALAEAIGNAFD 97
>gi|320326762|gb|EFW82805.1| plasmid maintenance protein [Pseudomonas syringae pv. glycinea
str. race 4]
gi|330892210|gb|EGH24871.1| plasmid maintenance protein [Pseudomonas syringae pv. mori str.
301020]
Length=108
Score = 47.4 bits (111), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/108 (36%), Positives = 54/108 (50%), Gaps = 15/108 (13%)
Query 7 RGEVWWCEM-----AEIGR-RPVVVLSRDAAIPRLRRALVAPCT-TTIRGLASE--VVLE 57
RGEVWW E +EI + RP V++S D+A L R +V P T +T R E + LE
Sbjct 3 RGEVWWVEFDPSVGSEIKKTRPAVIVSNDSANRHLARVVVVPLTSSTERTYPGEALITLE 62
Query 58 PGSDPIPRRSAVNLDSVESVSVAVLVNRLGRLADIRMRAICTALEVAV 105
S S D + + L NRLG+L+ + M A+ A+ V +
Sbjct 63 GQS------SKAMADQIMAADKKRLKNRLGKLSKVDMVAVENAISVHL 104
>gi|284042400|ref|YP_003392740.1| MazF family transcriptional regulator [Conexibacter woesei DSM
14684]
gi|283946621|gb|ADB49365.1| transcriptional modulator of MazE/toxin, MazF [Conexibacter woesei
DSM 14684]
Length=82
Score = 47.4 bits (111), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/104 (35%), Positives = 48/104 (47%), Gaps = 26/104 (25%)
Query 5 PARGEVWWCEMAEIGRRPVVVLSRDAAIPRLRRALVAPCTTTIRGLASEVVLEPGSDP-I 63
P +GEVWW E AE RRPV+V++R AIP G+D +
Sbjct 4 PRQGEVWWAE-AEDKRRPVLVVTRTEAIPL------------------------GADEGL 38
Query 64 PRRSAVNLDSVESVSVAVLVNRLGRLADIRMRAICTALEVAVDC 107
P A + D+V+ V +L R+G L R IC AL+ DC
Sbjct 39 PVDCAASFDNVQPVERRLLTRRVGVLPPQRRHEICRALDALADC 82
>gi|317125701|ref|YP_004099813.1| PemK family protein [Intrasporangium calvum DSM 43043]
gi|315589789|gb|ADU49086.1| PemK family protein [Intrasporangium calvum DSM 43043]
Length=104
Score = 47.0 bits (110), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 33/86 (39%), Positives = 51/86 (60%), Gaps = 1/86 (1%)
Query 21 RPVVVLSRDAAIPRLRRALVAPCTTTIRGLASEVVLEPGSDPIPRRSAVNLDSVESVSVA 80
RP +VL+R+AA + + VAP TTT++GL+SEV + P + + AV LD+V +V V
Sbjct 13 RPALVLTREAARGAMTKVTVAPITTTVKGLSSEVRVGP-DNGLDHECAVALDNVVTVPVE 71
Query 81 VLVNRLGRLADIRMRAICTALEVAVD 106
+L +G L + + AL +A D
Sbjct 72 LLGRTIGFLKAEQEVELARALVLAYD 97
>gi|313677683|ref|YP_004055679.1| transcriptional modulator of maze/toxin, mazf [Marivirga tractuosa
DSM 4126]
gi|312944381|gb|ADR23571.1| transcriptional modulator of MazE/toxin, MazF [Marivirga tractuosa
DSM 4126]
Length=110
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/91 (32%), Positives = 46/91 (51%), Gaps = 7/91 (7%)
Query 6 ARGEVWWCEM------AEIGRRPVVVLSRDAAIPRLRRALVAPCTTTIRGLASEVVLEPG 59
+ E+W + + G RPVV+LS + A LR +V P TT ++G VLEP
Sbjct 2 KQAEIWNVNLNPVKGSEQAGFRPVVILSGNLANEFLRTIIVCPLTTKVKGYKGNPVLEPD 61
Query 60 -SDPIPRRSAVNLDSVESVSVAVLVNRLGRL 89
+ + +S V + + S+S VN+LG +
Sbjct 62 IKNGLKEKSEVLVFHIRSISKDRFVNKLGEV 92
>gi|345005711|ref|YP_004808564.1| transcriptional modulator of MazE/toxin, MazF [halophilic archaeon
DL31]
gi|344321337|gb|AEN06191.1| transcriptional modulator of MazE/toxin, MazF [halophilic archaeon
DL31]
Length=117
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/102 (34%), Positives = 50/102 (50%), Gaps = 7/102 (6%)
Query 5 PARGEVWWCEMAEIGRRPVVVLSRDAAIPRLRRALVAPCTTTIRGLASEVVLEPGSDPIP 64
PA G EM + RP VV+ D +VAP T T RG EV++E P
Sbjct 19 PAEGH----EMKKT--RPAVVVQNDVGNNNSTTTIVAPATGTYRGYPFEVLVEADESPFR 72
Query 65 RRSAVNLDSVESVSVAVLVNRL-GRLADIRMRAICTALEVAV 105
+ S+V LD + VS+ ++ + GRL M + AL+++V
Sbjct 73 KDSSVRLDQIRVVSIETRIHSVAGRLDSETMDDVDEALKLSV 114
>gi|311745739|ref|ZP_07719524.1| toxin-antitoxin system, toxin component, MazF family [Algoriphagus
sp. PR1]
gi|126575182|gb|EAZ79532.1| toxin-antitoxin system, toxin component, MazF family [Algoriphagus
sp. PR1]
Length=110
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/103 (26%), Positives = 53/103 (52%), Gaps = 7/103 (6%)
Query 7 RGEVWWCEM------AEIGRRPVVVLSRDAAIPRLRRALVAPCTTTIRGLASEVVLEPGS 60
+GE+W ++ + GRRPVV+LS + L+ + AP TT I+ +L+P +
Sbjct 3 QGEIWMSDLNPSVGSEQAGRRPVVILSGNLMNKFLQVVITAPLTTKIKNYQGNPILKPST 62
Query 61 -DPIPRRSAVNLDSVESVSVAVLVNRLGRLADIRMRAICTALE 102
+ + S + + + S+S L+ ++G ++ ++ T L+
Sbjct 63 KNGLKLESELLVFHIRSISKKRLIEKVGEISSDELKIALTTLQ 105
>gi|110668140|ref|YP_657951.1| PemK-like growth inhibitor protein (MazF protein) [Haloquadratum
walsbyi DSM 16790]
gi|109625887|emb|CAJ52328.1| PemK-like growth inhibitor protein (MazF protein) [Haloquadratum
walsbyi DSM 16790]
Length=117
Score = 45.1 bits (105), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/102 (34%), Positives = 50/102 (50%), Gaps = 7/102 (6%)
Query 5 PARGEVWWCEMAEIGRRPVVVLSRDAAIPRLRRALVAPCTTTIRGLASEVVLEPGSDPIP 64
PA G EM + RP VV+ D + +VAP T T R EV++E P
Sbjct 19 PAEGH----EMRKT--RPAVVVQNDVGNKNSKTTIVAPATGTYRSYPFEVLVEASDSPFE 72
Query 65 RRSAVNLDSVESVSVAVLVNRL-GRLADIRMRAICTALEVAV 105
+ +V LD + VSV ++ + G LAD + I AL+V++
Sbjct 73 KDFSVRLDQIRVVSVEKRIHSVAGSLADSTVGEIDDALKVSL 114
>gi|339729055|emb|CCC40264.1| PemK domain protein [Haloquadratum walsbyi C23]
Length=117
Score = 44.7 bits (104), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/102 (33%), Positives = 50/102 (50%), Gaps = 7/102 (6%)
Query 5 PARGEVWWCEMAEIGRRPVVVLSRDAAIPRLRRALVAPCTTTIRGLASEVVLEPGSDPIP 64
PA G EM + RP VV+ D + +VAP T T R EV++E P
Sbjct 19 PAEGH----EMQKT--RPAVVVQNDVGNKNSKITIVAPATGTYRSYPFEVLVEASDSPFE 72
Query 65 RRSAVNLDSVESVSVAVLVNRL-GRLADIRMRAICTALEVAV 105
+ +V LD + VSV ++ + G LAD + I AL++++
Sbjct 73 KDFSVRLDQIRVVSVEKQIHSVAGSLADSTVGEIDDALKLSL 114
>gi|166363781|ref|YP_001656054.1| PemK-like protein [Microcystis aeruginosa NIES-843]
gi|166368557|ref|YP_001660830.1| PemK family protein [Microcystis aeruginosa NIES-843]
gi|166086154|dbj|BAG00862.1| PemK-like protein [Microcystis aeruginosa NIES-843]
gi|166090930|dbj|BAG05638.1| PemK family protein [Microcystis aeruginosa NIES-843]
Length=118
Score = 44.3 bits (103), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/109 (27%), Positives = 53/109 (49%), Gaps = 9/109 (8%)
Query 7 RGEVWWCEMAE------IGRRPVVVLSRDA-AIPRLRRALVAPCTTTIR--GLASEVVLE 57
+GE++W ++ E RP VV+ DA ++ +V P TT +R V+L
Sbjct 5 QGEIYWIDLGEPQGSEPAYLRPCVVVQNDALNQSQIGTVIVCPLTTNLRRAKAIGNVLLN 64
Query 58 PGSDPIPRRSAVNLDSVESVSVAVLVNRLGRLADIRMRAICTALEVAVD 106
G +P S VN+ V +V +L +GRL+ +++ I + + ++
Sbjct 65 EGEGNLPESSVVNVSQVFTVDKRLLTESIGRLSREKIKLIIQGINLVIE 113
>gi|344219327|gb|AEM99957.1| hypothetical protein MTCTRI2_1534 [Mycobacterium tuberculosis
CTRI-2]
Length=105
Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/101 (32%), Positives = 53/101 (53%), Gaps = 4/101 (3%)
Query 5 PARGEVWWCEMAEIGRRPVVVLSRDAAIPRLRRALVAPCTTTIRGLASEVVLEPGSDPIP 64
P RG+V+ C++ G +P +++S +A + TTT R + + V + P SDP+
Sbjct 4 PLRGQVYRCDLG-YGAKPWLIVSNNARNRHTADVVAVRLTTTRRTIPTWVAMGP-SDPLT 61
Query 65 RRSAVNLDSVESVSVAVLVNRLGRLADIRMRAICTALEVAV 105
R VN D++E++ L + LG + M I TAL A+
Sbjct 62 RY--VNADNIETLGKDELGDYLGEVTPATMNKINTALATAL 100
>gi|344201304|ref|YP_004785630.1| transcriptional modulator of MazE/toxin, MazF [Acidithiobacillus
ferrivorans SS3]
gi|343776748|gb|AEM49304.1| transcriptional modulator of MazE/toxin, MazF [Acidithiobacillus
ferrivorans SS3]
Length=108
Score = 43.5 bits (101), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/110 (32%), Positives = 51/110 (47%), Gaps = 11/110 (10%)
Query 7 RGEVWWCEM-----AEIGR-RPVVVLSRDAAIPRLRRALVAPCTT-TIRGLASEVVLEPG 59
RGEVWW E EI + RP V++S DAA L R +V P T+ T R E ++
Sbjct 3 RGEVWWVEFDPSVGGEIRKTRPAVIVSNDAANRNLARVVVVPLTSNTGRQYPGEALVTLA 62
Query 60 SDPIPRRSAVNLDSVESVSVAVLVNRLGRLADIRMRAICTALEVAVDCSR 109
P D + + + L N +G L+ M A+ TA+ + + R
Sbjct 63 GKP----GKAMADQIMAADKSRLKNPMGSLSKAEMTAVETAILIHLGMPR 108
>gi|159027339|emb|CAO90524.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
Length=115
Score = 43.5 bits (101), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/114 (29%), Positives = 57/114 (50%), Gaps = 11/114 (9%)
Query 4 LPARGEVWWCEM-----AEIGR-RPVVVLSRDAAIPRLRRALVAPCT---TTIRGLASEV 54
+P RGE+W AEI + RP VV+S D+ + +L L+AP T T V
Sbjct 1 MPKRGEIWLVNFDPTVGAEIKKVRPAVVISSDS-VGKLPIKLIAPITDWKTYFSANFWHV 59
Query 55 VLEPGS-DPIPRRSAVNLDSVESVSVAVLVNRLGRLADIRMRAICTALEVAVDC 107
+EP S + + + SA++ + V + + +LG +++I M I A+ ++
Sbjct 60 KIEPNSINGLNKASAIDTLQLRGVDLQRFIRKLGSVSEITMLEIVAAIATVIEF 113
>gi|111225278|ref|YP_716072.1| hypothetical protein FRAAL5929 [Frankia alni ACN14a]
gi|111152810|emb|CAJ64554.1| Hypothetical protein FRAAL5929 [Frankia alni ACN14a]
Length=103
Score = 43.5 bits (101), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/93 (36%), Positives = 46/93 (50%), Gaps = 9/93 (9%)
Query 20 RRPVVVLSRDAAIPRLRRA-----LVAPCTTTIRGLASEVVLEPGSDPIPRRSAVNLDSV 74
RRP VV+S D RL R+ +V P T T RGL S V L PG + + S ++ V
Sbjct 15 RRPAVVVSAD----RLNRSRAGLSIVVPVTRTRRGLPSHVELAPGGTGLHQTSFAKVEDV 70
Query 75 ESVSVAVLVNRLGRLADIRMRAICTALEVAVDC 107
+SVS RLG + + + AL+ +D
Sbjct 71 KSVSQQRFARRLGVVGPDHLLRMTEALKFLLDM 103
>gi|153869667|ref|ZP_01999211.1| conserved hypothetical protein [Beggiatoa sp. PS]
gi|152073872|gb|EDN70794.1| conserved hypothetical protein [Beggiatoa sp. PS]
Length=105
Score = 43.1 bits (100), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/104 (31%), Positives = 49/104 (48%), Gaps = 2/104 (1%)
Query 5 PARGEVWWCEMAEIGR-RPVVVLSRDAAIPRLRRALVAPCTTTIRGLASEVVLEPGSDPI 63
P G++W ++ + RPVV++SR P + P TT R A EVVL P +
Sbjct 3 PKYGDIWLADLGLAAKTRPVVIVSRYDPEPPRALTIYIPLTTQYRNSAYEVVL-PKLRFL 61
Query 64 PRRSAVNLDSVESVSVAVLVNRLGRLADIRMRAICTALEVAVDC 107
+ S N+ + S+ L +LG L + M I A+ A+D
Sbjct 62 NQNSVANVQGIGSLPTIRLERKLGELPNEIMLKIKQAILFALDM 105
>gi|256848378|ref|ZP_05553821.1| regulatory protein [Lactobacillus coleohominis 101-4-CHN]
gi|256714976|gb|EEU29954.1| regulatory protein [Lactobacillus coleohominis 101-4-CHN]
Length=116
Score = 43.1 bits (100), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/110 (24%), Positives = 55/110 (50%), Gaps = 8/110 (7%)
Query 7 RGEVWWCEMAEI------GRRPVVVLSRDAAIPRLRRALVAPCTTTIRG--LASEVVLEP 58
RG +++ ++ + G RPVV++ D +VAP T ++ L + V ++
Sbjct 7 RGAIYYARLSPVIGSEQGGFRPVVIVQNDVGNLHSPTMIVAPITAQMQKHRLPTHVPIKQ 66
Query 59 GSDPIPRRSAVNLDSVESVSVAVLVNRLGRLADIRMRAICTALEVAVDCS 108
I R S + L+ + ++ L +++G+L M+A+ AL+V++ +
Sbjct 67 NVKGIKRDSQILLEQIRTIDKQRLADQIGQLNQATMKAVNQALQVSLSLN 116
>gi|158335749|ref|YP_001516921.1| hypothetical protein AM1_2600 [Acaryochloris marina MBIC11017]
gi|158305990|gb|ABW27607.1| conserved hypothetical protein [Acaryochloris marina MBIC11017]
Length=121
Score = 43.1 bits (100), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 39/115 (34%), Positives = 57/115 (50%), Gaps = 11/115 (9%)
Query 3 ALPARGEVWWCEM-----AEIGR-RPVVVLSRDAAIPRLRRALVAPCTTTIRGLAS---E 53
A+P RGEVW EI + RP +V+S D A+ +L LVAP T A
Sbjct 8 AVPKRGEVWLVNFDPTLGTEIKKTRPAIVISSD-AVGKLPIKLVAPVTDWKPYFAKNIWH 66
Query 54 VVLEPGSDP-IPRRSAVNLDSVESVSVAVLVNRLGRLADIRMRAICTALEVAVDC 107
V LEP +D + + S+V+ + V L+ RLG L+D M +I A+ ++
Sbjct 67 VKLEPSADNGLSKLSSVDALQLRGVDQQRLIRRLGYLSDEIMASIEIAIMTIIEA 121
>gi|186682027|ref|YP_001865223.1| MazF family transcripitonal regulator [Nostoc punctiforme PCC
73102]
gi|186464479|gb|ACC80280.1| transcriptional modulator of MazE/toxin, MazF [Nostoc punctiforme
PCC 73102]
Length=117
Score = 43.1 bits (100), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 35/112 (32%), Positives = 55/112 (50%), Gaps = 9/112 (8%)
Query 7 RGEVWWCEM-----AEIGRRPVVVLSRDAAIPRLRRALVAPCTTTIRGLASE---VVLEP 58
RGEVW + EI ++ ++ D AI L ++ P T A V LEP
Sbjct 3 RGEVWLVNLDPTVGTEISKKRPCIIVNDDAIGILPLKVIVPVTDWKERYAVRPWMVRLEP 62
Query 59 GS-DPIPRRSAVNLDSVESVSVAVLVNRLGRLADIRMRAICTALEVAVDCSR 109
+ + + + S V+ + SVS LV +LG+++D M+ IC AL V ++ S
Sbjct 63 STENSLAKVSGVDTFQIRSVSETRLVRKLGQISDSEMQLICQALAVVLNISH 114
>gi|148264060|ref|YP_001230766.1| transcriptional modulator of MazE/toxin, MazF [Geobacter uraniireducens
Rf4]
gi|146397560|gb|ABQ26193.1| transcriptional modulator of MazE/toxin, MazF [Geobacter uraniireducens
Rf4]
Length=118
Score = 42.7 bits (99), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 28/109 (26%), Positives = 55/109 (51%), Gaps = 9/109 (8%)
Query 7 RGEVWWCEM-----AEIGRRPVVVLSRDAAIPR--LRRALVAPCTTTIR--GLASEVVLE 57
+G+++W E+ +E G + V+ ++ R +R LV P TT ++ V+L+
Sbjct 5 QGDIYWIELDEPEGSEPGYKHPHVIVQNNLFNRSQIRTVLVCPLTTNLKRASAPGNVLLD 64
Query 58 PGSDPIPRRSAVNLDSVESVSVAVLVNRLGRLADIRMRAICTALEVAVD 106
+P++S VN+ V +V A L +G L+ R+ I +++ +D
Sbjct 65 KKESNLPKQSVVNVTQVFTVDKAQLDEYVGTLSSKRITEILNGIKLVLD 113
>gi|282882941|ref|ZP_06291546.1| toxin-antitoxin system, toxin component, MazF family [Peptoniphilus
lacrimalis 315-B]
gi|281297352|gb|EFA89843.1| toxin-antitoxin system, toxin component, MazF family [Peptoniphilus
lacrimalis 315-B]
Length=114
Score = 42.7 bits (99), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 27/107 (26%), Positives = 55/107 (52%), Gaps = 8/107 (7%)
Query 7 RGEVWWCEMAEI------GRRPVVVLSRDAAIPRLRRALVAPCTTTIRG--LASEVVLEP 58
RG++++ +++ + G RPVVV+ D +VA T+ + L + V ++
Sbjct 5 RGDIFYADLSPVIGSEQGGVRPVVVVQNDVGNKYSPTIIVAAITSQLNKAKLPTHVNVKA 64
Query 59 GSDPIPRRSAVNLDSVESVSVAVLVNRLGRLADIRMRAICTALEVAV 105
+ P+P+ S + L+ + ++ L R+GR D M I A++V++
Sbjct 65 KTVPLPKNSVILLEQIRTIDKKRLRERIGRFGDDVMTVIDDAIKVSL 111
>gi|15608633|ref|NP_216011.1| hypothetical protein Rv1495 [Mycobacterium tuberculosis H37Rv]
gi|15840958|ref|NP_335995.1| hypothetical protein MT1542 [Mycobacterium tuberculosis CDC1551]
gi|31792691|ref|NP_855184.1| hypothetical protein Mb1532 [Mycobacterium bovis AF2122/97]
77 more sequence titles
Length=105
Score = 42.7 bits (99), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 31/101 (31%), Positives = 52/101 (52%), Gaps = 4/101 (3%)
Query 5 PARGEVWWCEMAEIGRRPVVVLSRDAAIPRLRRALVAPCTTTIRGLASEVVLEPGSDPIP 64
P RG+V+ C++ G +P +++S +A + TTT R + + V + P SDP+
Sbjct 4 PLRGQVYRCDLG-YGAKPWLIVSNNARNRHTADVVAVRLTTTRRTIPTWVAMGP-SDPL- 60
Query 65 RRSAVNLDSVESVSVAVLVNRLGRLADIRMRAICTALEVAV 105
VN D++E++ L + LG + M I TAL A+
Sbjct 61 -TGYVNADNIETLGKDELGDYLGEVTPATMNKINTALATAL 100
>gi|289753579|ref|ZP_06512957.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
gi|289694166|gb|EFD61595.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
Length=105
Score = 42.7 bits (99), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 31/101 (31%), Positives = 51/101 (51%), Gaps = 4/101 (3%)
Query 5 PARGEVWWCEMAEIGRRPVVVLSRDAAIPRLRRALVAPCTTTIRGLASEVVLEPGSDPIP 64
P RG+V+ C++ G +P +++S +A + TTT R + + V + P SDP+
Sbjct 4 PLRGQVYRCDLG-YGAKPWLIVSNNARNRHTADVVAVRLTTTRRTIPTWVAMGP-SDPL- 60
Query 65 RRSAVNLDSVESVSVAVLVNRLGRLADIRMRAICTALEVAV 105
VN D++E+ L + LG + M I TAL A+
Sbjct 61 -TGYVNADNIETFGKDELGDYLGEVTPATMNKINTALATAL 100
>gi|308270639|emb|CBX27251.1| Uncharacterized protein Rv1991c/MT2046 [uncultured Desulfobacterium
sp.]
Length=131
Score = 42.4 bits (98), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 27/109 (25%), Positives = 57/109 (53%), Gaps = 9/109 (8%)
Query 7 RGEVWWCEMAEIG------RRPVVVLSRD-AAIPRLRRALVAPCTTTI-RGLA-SEVVLE 57
+GE++W ++AE R P +V+ + R+ +V T + R A V+L
Sbjct 19 QGEIFWIDLAEPKGSEPGYRHPYIVIQNNLFNASRINTVVVCSLTGNLNRAKAPGNVLLN 78
Query 58 PGSDPIPRRSAVNLDSVESVSVAVLVNRLGRLADIRMRAICTALEVAVD 106
G +P+++ VN+ + +V+ + LV +LG++++ RM I +++ +
Sbjct 79 KGEANLPQKNVVNISQIFTVNKSDLVEKLGQVSEKRMTEILDGIKLLTE 127
>gi|251772678|gb|EES53242.1| transcriptional modulator of MazE/toxin, MazF [Leptospirillum
ferrodiazotrophum]
Length=108
Score = 42.4 bits (98), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 36/110 (33%), Positives = 51/110 (47%), Gaps = 11/110 (10%)
Query 7 RGEVWWCEM-----AEIGR-RPVVVLSRDAAIPRLRRALVAPCTT-TIRGLASEVVLEPG 59
RGEVWW E +EI + RP V++S DAA L R +V P T+ T R E +
Sbjct 3 RGEVWWVEFDPSVGSEIRKTRPAVIVSNDAANRNLARVVVVPLTSNTGRLYPGEAFVTLS 62
Query 60 SDPIPRRSAVNLDSVESVSVAVLVNRLGRLADIRMRAICTALEVAVDCSR 109
P D + + + L N +G L+ M A+ TA+ V + R
Sbjct 63 GKP----GKAMADQIMAADKSRLKNLMGTLSKTDMTALETAILVHLGMPR 108
>gi|336173464|ref|YP_004580602.1| transcriptional modulator of MazE/toxin, MazF [Lacinutrix sp.
5H-3-7-4]
gi|334728036|gb|AEH02174.1| transcriptional modulator of MazE/toxin, MazF [Lacinutrix sp.
5H-3-7-4]
Length=110
Score = 42.0 bits (97), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 25/90 (28%), Positives = 47/90 (53%), Gaps = 7/90 (7%)
Query 7 RGEVWWCEM------AEIGRRPVVVLSRDAAIPRLRRALVAPCTTTIRGLASEVVLEPGS 60
+GE+W + + GRRP V++S + L+ +V P TT+++ ++LEP +
Sbjct 3 QGEIWELYLNPTKGSEQSGRRPAVIISGNMLNTYLQVVIVCPLTTSVKNYKGNLILEPNA 62
Query 61 -DPIPRRSAVNLDSVESVSVAVLVNRLGRL 89
+ + + S V V SVS L ++G++
Sbjct 63 INGLAKTSEVLTFHVRSVSKTRLDKKIGKI 92
>gi|302547010|ref|ZP_07299352.1| conserved hypothetical protein [Streptomyces hygroscopicus ATCC
53653]
gi|302464628|gb|EFL27721.1| conserved hypothetical protein [Streptomyces himastatinicus ATCC
53653]
Length=134
Score = 42.0 bits (97), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 35/107 (33%), Positives = 49/107 (46%), Gaps = 11/107 (10%)
Query 7 RGEVWWCEMAEIGRRPVVVLSRDAAIPRLRRALVAPCTTTIRGLASEV-VLEPGSDP--- 62
RGEVWW + E RRPVV+LS + + +VAP I GL EV V P P
Sbjct 3 RGEVWWVDFDE--RRPVVLLSDEESSGFQAMQVVAPAGVDISGLGVEVAVGAPEGLPFEG 60
Query 63 -----IPRRSAVNLDSVESVSVAVLVNRLGRLADIRMRAICTALEVA 104
PR + +V+ L+ R G L+ +++ + AL A
Sbjct 61 VLRFAFPRPGFTPCTWLTTVAQDDLIERAGVLSSVKLSEVGEALRAA 107
>gi|333979032|ref|YP_004516977.1| transcriptional modulator of MazE/toxin, MazF [Desulfotomaculum
kuznetsovii DSM 6115]
gi|333822513|gb|AEG15176.1| transcriptional modulator of MazE/toxin, MazF [Desulfotomaculum
kuznetsovii DSM 6115]
Length=113
Score = 42.0 bits (97), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 31/95 (33%), Positives = 46/95 (49%), Gaps = 7/95 (7%)
Query 3 ALPARGEVWWCEM------AEIGRRPVVVLSRDAAIPR-LRRALVAPCTTTIRGLASEVV 55
A P RGEVW ++ + GRRP +V+S D +V P TT +G+ V
Sbjct 2 ATPLRGEVWLVDLNPVRGHEQAGRRPALVVSVDMFNSGPAELVVVLPITTKDKGIPLHVR 61
Query 56 LEPGSDPIPRRSAVNLDSVESVSVAVLVNRLGRLA 90
++P + S V + + SVS L RLGR++
Sbjct 62 IDPPEGGVKETSFVKCEDIRSVSTERLTARLGRVS 96
>gi|17227833|ref|NP_484381.1| hypothetical protein all0337 [Nostoc sp. PCC 7120]
gi|17129682|dbj|BAB72295.1| all0337 [Nostoc sp. PCC 7120]
Length=121
Score = 41.6 bits (96), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 34/104 (33%), Positives = 48/104 (47%), Gaps = 2/104 (1%)
Query 5 PARGEVWWCEMAEIGR-RPVVVLSRDAAIPRLRRALVAPCTTTIRGLASEVVLEPGSDPI 63
P GEVW ++ + RPVV++SR P + P TT RG A EV L P +
Sbjct 3 PKPGEVWLVDLGLAAKARPVVIVSRYDLTPPRALVIYIPITTQNRGSAYEVEL-PVLSFL 61
Query 64 PRRSAVNLDSVESVSVAVLVNRLGRLADIRMRAICTALEVAVDC 107
+ S N+ + S+ L +LG L+ M I AL +D
Sbjct 62 RQGSVANVQGLGSIPSVRLERKLGELSKETMLEIKQALMFTLDL 105
>gi|302546980|ref|ZP_07299322.1| conserved hypothetical protein [Streptomyces hygroscopicus ATCC
53653]
gi|302464598|gb|EFL27691.1| conserved hypothetical protein [Streptomyces himastatinicus ATCC
53653]
Length=134
Score = 41.6 bits (96), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 25/48 (53%), Positives = 27/48 (57%), Gaps = 2/48 (4%)
Query 7 RGEVWWCEMAEIGRRPVVVLSRDAAIPRLRRALVAPCTTTIRGLASEV 54
RGEVWW E E RRPVV+LS D A +VAP I GL EV
Sbjct 27 RGEVWWVEFDE--RRPVVLLSGDDASGIQVMQVVAPAGVDISGLGVEV 72
>gi|302555807|ref|ZP_07308149.1| conserved hypothetical protein [Streptomyces viridochromogenes
DSM 40736]
gi|302473425|gb|EFL36518.1| conserved hypothetical protein [Streptomyces viridochromogenes
DSM 40736]
Length=134
Score = 41.2 bits (95), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 35/107 (33%), Positives = 49/107 (46%), Gaps = 11/107 (10%)
Query 7 RGEVWWCEMAEIGRRPVVVLSRDAAIPRLRRALVAPCTTTIRGLASEV-VLEPGSDP--- 62
RGEVWW + E RRPVV+LS + + +VAP I GL EV V P P
Sbjct 3 RGEVWWVDFDE--RRPVVLLSDEESSGFQAMQVVAPAGVDISGLGVEVAVGAPEGLPFEG 60
Query 63 -----IPRRSAVNLDSVESVSVAVLVNRLGRLADIRMRAICTALEVA 104
PR + +V+ L+ R G L+ +++ + AL A
Sbjct 61 VLRFAFPRPGFTPCTWLTTVARDDLIERAGVLSSVKLSEVGEALRAA 107
Lambda K H
0.324 0.135 0.404
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 129509500864
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40