BLASTP 2.2.25+


Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           15,229,318 sequences; 5,219,829,388 total letters



Query= Rv1942c

Length=109
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|15841413|ref|NP_336450.1|  hypothetical protein MT1992 [Mycoba...   207    5e-52
gi|15609079|ref|NP_216458.1|  hypothetical protein Rv1942c [Mycob...   206    8e-52
gi|308369568|ref|ZP_07418288.2|  toxin [Mycobacterium tuberculosi...   190    7e-47
gi|323719559|gb|EGB28684.1|  toxin protein [Mycobacterium tubercu...   178    2e-43
gi|284991043|ref|YP_003409597.1|  transcriptional modulator of Ma...   176    7e-43
gi|108802468|ref|YP_642664.1|  transcriptional modulator of MazE/...   140    5e-32
gi|289570028|ref|ZP_06450255.1|  conserved hypothetical protein [...  84.7    4e-15
gi|333992022|ref|YP_004524636.1|  PemK-like protein [Mycobacteriu...  80.1    1e-13
gi|94266554|ref|ZP_01290240.1|  PemK-like protein [delta proteoba...  68.9    2e-10
gi|167044217|gb|ABZ08898.1|  putative PemK-like protein [uncultur...  67.8    5e-10
gi|297568724|ref|YP_003690068.1|  transcriptional modulator of Ma...  61.2    5e-08
gi|340625678|ref|YP_004744130.1|  hypothetical protein MCAN_06581...  58.2    4e-07
gi|15607799|ref|NP_215173.1|  hypothetical protein Rv0659c [Mycob...  55.1    3e-06
gi|308379835|ref|ZP_07487770.2|  toxin [Mycobacterium tuberculosi...  54.7    4e-06
gi|111025169|ref|YP_707589.1|  growth inhibitor PemK [Rhodococcus...  53.1    1e-05
gi|333989865|ref|YP_004522479.1|  hypothetical protein JDM601_122...  52.0    3e-05
gi|284030849|ref|YP_003380780.1|  transcriptional modulator of Ma...  50.4    9e-05
gi|31792295|ref|NP_854788.1|  hypothetical protein Mb1132c [Mycob...  48.5    3e-04
gi|289583045|ref|YP_003481511.1|  MazF family transcriptional reg...  48.1    5e-04
gi|308370063|ref|ZP_07420166.2|  toxin [Mycobacterium tuberculosi...  47.8    6e-04
gi|15608242|ref|NP_215618.1|  hypothetical protein Rv1102c [Mycob...  47.8    6e-04
gi|320326762|gb|EFW82805.1|  plasmid maintenance protein [Pseudom...  47.4    7e-04
gi|284042400|ref|YP_003392740.1|  MazF family transcriptional reg...  47.4    8e-04
gi|317125701|ref|YP_004099813.1|  PemK family protein [Intraspora...  47.0    9e-04
gi|313677683|ref|YP_004055679.1|  transcriptional modulator of ma...  47.0    0.001
gi|345005711|ref|YP_004808564.1|  transcriptional modulator of Ma...  47.0    0.001
gi|311745739|ref|ZP_07719524.1|  toxin-antitoxin system, toxin co...  46.2    0.002
gi|110668140|ref|YP_657951.1|  PemK-like growth inhibitor protein...  45.1    0.004
gi|339729055|emb|CCC40264.1|  PemK domain protein [Haloquadratum ...  44.7    0.005
gi|166363781|ref|YP_001656054.1|  PemK-like protein [Microcystis ...  44.3    0.007
gi|344219327|gb|AEM99957.1|  hypothetical protein MTCTRI2_1534 [M...  43.9    0.007
gi|344201304|ref|YP_004785630.1|  transcriptional modulator of Ma...  43.5    0.009
gi|159027339|emb|CAO90524.1|  unnamed protein product [Microcysti...  43.5    0.010
gi|111225278|ref|YP_716072.1|  hypothetical protein FRAAL5929 [Fr...  43.5    0.010
gi|153869667|ref|ZP_01999211.1|  conserved hypothetical protein [...  43.1    0.012
gi|256848378|ref|ZP_05553821.1|  regulatory protein [Lactobacillu...  43.1    0.014
gi|158335749|ref|YP_001516921.1|  hypothetical protein AM1_2600 [...  43.1    0.014
gi|186682027|ref|YP_001865223.1|  MazF family transcripitonal reg...  43.1    0.014
gi|148264060|ref|YP_001230766.1|  transcriptional modulator of Ma...  42.7    0.016
gi|282882941|ref|ZP_06291546.1|  toxin-antitoxin system, toxin co...  42.7    0.018
gi|15608633|ref|NP_216011.1|  hypothetical protein Rv1495 [Mycoba...  42.7    0.020
gi|289753579|ref|ZP_06512957.1|  conserved hypothetical protein [...  42.7    0.020
gi|308270639|emb|CBX27251.1|  Uncharacterized protein Rv1991c/MT2...  42.4    0.021
gi|251772678|gb|EES53242.1|  transcriptional modulator of MazE/to...  42.4    0.024
gi|336173464|ref|YP_004580602.1|  transcriptional modulator of Ma...  42.0    0.028
gi|302547010|ref|ZP_07299352.1|  conserved hypothetical protein [...  42.0    0.029
gi|333979032|ref|YP_004516977.1|  transcriptional modulator of Ma...  42.0    0.033
gi|17227833|ref|NP_484381.1|  hypothetical protein all0337 [Nosto...  41.6    0.037
gi|302546980|ref|ZP_07299322.1|  conserved hypothetical protein [...  41.6    0.044
gi|302555807|ref|ZP_07308149.1|  conserved hypothetical protein [...  41.2    0.050


>gi|15841413|ref|NP_336450.1| hypothetical protein MT1992 [Mycobacterium tuberculosis CDC1551]
 gi|254232113|ref|ZP_04925440.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
 gi|13881650|gb|AAK46264.1| hypothetical protein MT1992 [Mycobacterium tuberculosis CDC1551]
 gi|124601172|gb|EAY60182.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
Length=117

 Score =  207 bits (526),  Expect = 5e-52, Method: Compositional matrix adjust.
 Identities = 109/109 (100%), Positives = 109/109 (100%), Gaps = 0/109 (0%)

Query  1    VTALPARGEVWWCEMAEIGRRPVVVLSRDAAIPRLRRALVAPCTTTIRGLASEVVLEPGS  60
            VTALPARGEVWWCEMAEIGRRPVVVLSRDAAIPRLRRALVAPCTTTIRGLASEVVLEPGS
Sbjct  9    VTALPARGEVWWCEMAEIGRRPVVVLSRDAAIPRLRRALVAPCTTTIRGLASEVVLEPGS  68

Query  61   DPIPRRSAVNLDSVESVSVAVLVNRLGRLADIRMRAICTALEVAVDCSR  109
            DPIPRRSAVNLDSVESVSVAVLVNRLGRLADIRMRAICTALEVAVDCSR
Sbjct  69   DPIPRRSAVNLDSVESVSVAVLVNRLGRLADIRMRAICTALEVAVDCSR  117


>gi|15609079|ref|NP_216458.1| hypothetical protein Rv1942c [Mycobacterium tuberculosis H37Rv]
 gi|31793134|ref|NP_855627.1| hypothetical protein Mb1977c [Mycobacterium bovis AF2122/97]
 gi|121637847|ref|YP_978070.1| hypothetical protein BCG_1981c [Mycobacterium bovis BCG str. 
Pasteur 1173P2]
 67 more sequence titles
 Length=109

 Score =  206 bits (525),  Expect = 8e-52, Method: Compositional matrix adjust.
 Identities = 108/109 (99%), Positives = 109/109 (100%), Gaps = 0/109 (0%)

Query  1    VTALPARGEVWWCEMAEIGRRPVVVLSRDAAIPRLRRALVAPCTTTIRGLASEVVLEPGS  60
            +TALPARGEVWWCEMAEIGRRPVVVLSRDAAIPRLRRALVAPCTTTIRGLASEVVLEPGS
Sbjct  1    MTALPARGEVWWCEMAEIGRRPVVVLSRDAAIPRLRRALVAPCTTTIRGLASEVVLEPGS  60

Query  61   DPIPRRSAVNLDSVESVSVAVLVNRLGRLADIRMRAICTALEVAVDCSR  109
            DPIPRRSAVNLDSVESVSVAVLVNRLGRLADIRMRAICTALEVAVDCSR
Sbjct  61   DPIPRRSAVNLDSVESVSVAVLVNRLGRLADIRMRAICTALEVAVDCSR  109


>gi|308369568|ref|ZP_07418288.2| toxin [Mycobacterium tuberculosis SUMu002]
 gi|308370871|ref|ZP_07423023.2| toxin [Mycobacterium tuberculosis SUMu003]
 gi|308402959|ref|ZP_07493677.2| toxin [Mycobacterium tuberculosis SUMu012]
 gi|308327162|gb|EFP16013.1| toxin [Mycobacterium tuberculosis SUMu002]
 gi|308330598|gb|EFP19449.1| toxin [Mycobacterium tuberculosis SUMu003]
 gi|308365868|gb|EFP54719.1| toxin [Mycobacterium tuberculosis SUMu012]
Length=100

 Score =  190 bits (482),  Expect = 7e-47, Method: Compositional matrix adjust.
 Identities = 99/100 (99%), Positives = 100/100 (100%), Gaps = 0/100 (0%)

Query  10   VWWCEMAEIGRRPVVVLSRDAAIPRLRRALVAPCTTTIRGLASEVVLEPGSDPIPRRSAV  69
            +WWCEMAEIGRRPVVVLSRDAAIPRLRRALVAPCTTTIRGLASEVVLEPGSDPIPRRSAV
Sbjct  1    MWWCEMAEIGRRPVVVLSRDAAIPRLRRALVAPCTTTIRGLASEVVLEPGSDPIPRRSAV  60

Query  70   NLDSVESVSVAVLVNRLGRLADIRMRAICTALEVAVDCSR  109
            NLDSVESVSVAVLVNRLGRLADIRMRAICTALEVAVDCSR
Sbjct  61   NLDSVESVSVAVLVNRLGRLADIRMRAICTALEVAVDCSR  100


>gi|323719559|gb|EGB28684.1| toxin protein [Mycobacterium tuberculosis CDC1551A]
Length=95

 Score =  178 bits (452),  Expect = 2e-43, Method: Compositional matrix adjust.
 Identities = 95/95 (100%), Positives = 95/95 (100%), Gaps = 0/95 (0%)

Query  15   MAEIGRRPVVVLSRDAAIPRLRRALVAPCTTTIRGLASEVVLEPGSDPIPRRSAVNLDSV  74
            MAEIGRRPVVVLSRDAAIPRLRRALVAPCTTTIRGLASEVVLEPGSDPIPRRSAVNLDSV
Sbjct  1    MAEIGRRPVVVLSRDAAIPRLRRALVAPCTTTIRGLASEVVLEPGSDPIPRRSAVNLDSV  60

Query  75   ESVSVAVLVNRLGRLADIRMRAICTALEVAVDCSR  109
            ESVSVAVLVNRLGRLADIRMRAICTALEVAVDCSR
Sbjct  61   ESVSVAVLVNRLGRLADIRMRAICTALEVAVDCSR  95


>gi|284991043|ref|YP_003409597.1| transcriptional modulator of MazE/toxin, MazF [Geodermatophilus 
obscurus DSM 43160]
 gi|284064288|gb|ADB75226.1| transcriptional modulator of MazE/toxin, MazF [Geodermatophilus 
obscurus DSM 43160]
Length=109

 Score =  176 bits (447),  Expect = 7e-43, Method: Compositional matrix adjust.
 Identities = 91/108 (85%), Positives = 95/108 (88%), Gaps = 0/108 (0%)

Query  1    VTALPARGEVWWCEMAEIGRRPVVVLSRDAAIPRLRRALVAPCTTTIRGLASEVVLEPGS  60
            +T LPARGEVWWCEMAEIGRRPVVVLSRDA IPR RRALVAPCTTTIRGL SEV LEPG 
Sbjct  1    MTTLPARGEVWWCEMAEIGRRPVVVLSRDAVIPRHRRALVAPCTTTIRGLVSEVGLEPGE  60

Query  61   DPIPRRSAVNLDSVESVSVAVLVNRLGRLADIRMRAICTALEVAVDCS  108
            DP+PRR  VN+DSVESVSVAVLV RLGRLAD RMR IC AL VAVDC+
Sbjct  61   DPVPRRCVVNMDSVESVSVAVLVERLGRLADTRMRQICGALAVAVDCA  108


>gi|108802468|ref|YP_642664.1| transcriptional modulator of MazE/toxin, MazF [Mycobacterium 
sp. MCS]
 gi|119855295|ref|YP_935898.1| transcriptional modulator of MazE/toxin, MazF [Mycobacterium 
sp. KMS]
 gi|108772887|gb|ABG11608.1| transcriptional modulator of MazE/toxin, MazF [Mycobacterium 
sp. MCS]
 gi|119698012|gb|ABL95083.1| transcriptional modulator of MazE/toxin, MazF [Mycobacterium 
sp. KMS]
Length=107

 Score =  140 bits (354),  Expect = 5e-32, Method: Compositional matrix adjust.
 Identities = 73/92 (80%), Positives = 78/92 (85%), Gaps = 0/92 (0%)

Query  4   LPARGEVWWCEMAEIGRRPVVVLSRDAAIPRLRRALVAPCTTTIRGLASEVVLEPGSDPI  63
           LPARGE+WWCE AE   RPVVVLSRD AIPRLRR LVAPCTTT+RGLASEVVL PG DP+
Sbjct  3   LPARGELWWCETAEAEPRPVVVLSRDVAIPRLRRVLVAPCTTTVRGLASEVVLTPGDDPV  62

Query  64  PRRSAVNLDSVESVSVAVLVNRLGRLADIRMR  95
           P+R+AVNLD VESV VA L  RLGRLAD RMR
Sbjct  63  PQRAAVNLDLVESVPVAALGTRLGRLADERMR  94


>gi|289570028|ref|ZP_06450255.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
 gi|289543782|gb|EFD47430.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
Length=47

 Score = 84.7 bits (208),  Expect = 4e-15, Method: Compositional matrix adjust.
 Identities = 43/47 (92%), Positives = 44/47 (94%), Gaps = 0/47 (0%)

Query  1   VTALPARGEVWWCEMAEIGRRPVVVLSRDAAIPRLRRALVAPCTTTI  47
           +TALPARGEVWWCEMAEIGRRPVVVLSRDAAIPRLRRALVAP  T I
Sbjct  1   MTALPARGEVWWCEMAEIGRRPVVVLSRDAAIPRLRRALVAPPATRI  47


>gi|333992022|ref|YP_004524636.1| PemK-like protein [Mycobacterium sp. JDM601]
 gi|333487990|gb|AEF37382.1| PemK-like protein [Mycobacterium sp. JDM601]
Length=103

 Score = 80.1 bits (196),  Expect = 1e-13, Method: Compositional matrix adjust.
 Identities = 43/101 (43%), Positives = 62/101 (62%), Gaps = 1/101 (0%)

Query  7    RGEVWWCEMAEIGRRPVVVLSRDAAIPRLRRALVAPCTTTIRGLASEVVLEPGSDPIPRR  66
            RGEVWW ++     RPV+VL+R     RL   LVAP TTT+R + +EV L+  +D +PR+
Sbjct  4    RGEVWWADVPGDKIRPVLVLTRQRFTSRLTSLLVAPVTTTVRNIPTEVALDR-ADGLPRQ  62

Query  67   SAVNLDSVESVSVAVLVNRLGRLADIRMRAICTALEVAVDC  107
             A N D+V ++  +   +R+ RLAD R+  +C A   AV C
Sbjct  63   CAANFDNVFTLGRSRFTSRIARLADERLSEVCRAYRFAVGC  103


>gi|94266554|ref|ZP_01290240.1| PemK-like protein [delta proteobacterium MLMS-1]
 gi|93452829|gb|EAT03355.1| PemK-like protein [delta proteobacterium MLMS-1]
Length=103

 Score = 68.9 bits (167),  Expect = 2e-10, Method: Compositional matrix adjust.
 Identities = 41/101 (41%), Positives = 62/101 (62%), Gaps = 2/101 (1%)

Query  7    RGEVWWCEMAE-IGRRPVVVLSRDAAIPRLRRALVAPCTTTIRGLASEVVLEPGSDPIPR  65
            RGEV W +      +RPV++LSRD+ I  L    VAP T TIR + SEV+L   +D +P+
Sbjct  3    RGEVRWYKFGRPDKKRPVLILSRDSIIEYLGEVTVAPITGTIRDIPSEVLLS-RADGLPK  61

Query  66   RSAVNLDSVESVSVAVLVNRLGRLADIRMRAICTALEVAVD  106
              AVN D +++V+ + L +RL  L  +RM+ +  A+  A+D
Sbjct  62   ECAVNCDHLQTVTKSKLGSRLATLPAVRMQEVGRAIHFALD  102


>gi|167044217|gb|ABZ08898.1| putative PemK-like protein [uncultured marine microorganism HF4000_APKG5H11]
Length=105

 Score = 67.8 bits (164),  Expect = 5e-10, Method: Compositional matrix adjust.
 Identities = 38/100 (38%), Positives = 61/100 (61%), Gaps = 2/100 (2%)

Query  7    RGEVWWCEMAEIG-RRPVVVLSRDAAIPRLRRALVAPCTTTIRGLASEVVLEPGSDPIPR  65
            RG++WW E+   G  RPVV++SRD+A        VAP T  +R L  EV+L P  D +P+
Sbjct  3    RGQLWWAELPPPGGHRPVVLISRDSAYSVREFITVAPVTARVRRLPIEVLLGP-HDGLPQ  61

Query  66   RSAVNLDSVESVSVAVLVNRLGRLADIRMRAICTALEVAV  105
             SA NLDS+ ++  + + + +  L+D ++RA+  A+  A+
Sbjct  62   NSAANLDSMLTIPKSSIHDYIASLSDDKVRAVDAAIHFAL  101


>gi|297568724|ref|YP_003690068.1| transcriptional modulator of MazE/toxin, MazF [Desulfurivibrio 
alkaliphilus AHT2]
 gi|296924639|gb|ADH85449.1| transcriptional modulator of MazE/toxin, MazF [Desulfurivibrio 
alkaliphilus AHT2]
Length=104

 Score = 61.2 bits (147),  Expect = 5e-08, Method: Compositional matrix adjust.
 Identities = 35/101 (35%), Positives = 58/101 (58%), Gaps = 1/101 (0%)

Query  7    RGEVWWCEMAE-IGRRPVVVLSRDAAIPRLRRALVAPCTTTIRGLASEVVLEPGSDPIPR  65
            RGE+ W + A    +RPV++L+RD+ +  L    +AP TTT+R + SEV L   +D +PR
Sbjct  3    RGEIRWYKFAAPDKKRPVLILTRDSVLEYLGEVTIAPITTTVRDIPSEVFLSAVNDGVPR  62

Query  66   RSAVNLDSVESVSVAVLVNRLGRLADIRMRAICTALEVAVD  106
              A+N D +++VS   +   +  L   +M  +  A+  A+D
Sbjct  63   DCALNCDHLQTVSKGKIGPLVTSLPRNKMLEVGRAIRFALD  103


>gi|340625678|ref|YP_004744130.1| hypothetical protein MCAN_06581 [Mycobacterium canettii CIPT 
140010059]
 gi|340003868|emb|CCC42998.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059]
Length=102

 Score = 58.2 bits (139),  Expect = 4e-07, Method: Compositional matrix adjust.
 Identities = 34/101 (34%), Positives = 50/101 (50%), Gaps = 1/101 (0%)

Query  7    RGEVWWCEMAEIGRRPVVVLSRDAAIPRLRRALVAPCTTTIRGLASEVVLEPGSDPIPRR  66
            RGE+W+      G RPV+VL+RD    R+   +V   T T RGL SE+ L    D +P  
Sbjct  3    RGELWFAATPG-GDRPVLVLTRDPVADRIGAVVVVALTRTRRGLVSELELTAAEDRVPSD  61

Query  67   SAVNLDSVESVSVAVLVNRLGRLADIRMRAICTALEVAVDC  107
              VN D++ ++       R+ RL+  R+   C  L  +  C
Sbjct  62   CVVNFDNIHTLPRTAFRRRITRLSPARLHEACQTLRASTGC  102


>gi|15607799|ref|NP_215173.1| hypothetical protein Rv0659c [Mycobacterium tuberculosis H37Rv]
 gi|15840062|ref|NP_335099.1| hypothetical protein MT0688 [Mycobacterium tuberculosis CDC1551]
 gi|31791843|ref|NP_854336.1| hypothetical protein Mb0678c [Mycobacterium bovis AF2122/97]
 75 more sequence titles
 Length=102

 Score = 55.1 bits (131),  Expect = 3e-06, Method: Compositional matrix adjust.
 Identities = 33/101 (33%), Positives = 50/101 (50%), Gaps = 1/101 (0%)

Query  7    RGEVWWCEMAEIGRRPVVVLSRDAAIPRLRRALVAPCTTTIRGLASEVVLEPGSDPIPRR  66
            RGE+W+      G RPV+VL+RD    R+   +V   T T RGL SE+ L    + +P  
Sbjct  3    RGELWFAATPG-GDRPVLVLTRDPVADRIGAVVVVALTRTRRGLVSELELTAVENRVPSD  61

Query  67   SAVNLDSVESVSVAVLVNRLGRLADIRMRAICTALEVAVDC  107
              VN D++ ++       R+ RL+  R+   C  L  +  C
Sbjct  62   CVVNFDNIHTLPRTAFRRRITRLSPARLHEACQTLRASTGC  102


>gi|308379835|ref|ZP_07487770.2| toxin [Mycobacterium tuberculosis SUMu011]
 gi|308363397|gb|EFP52248.1| toxin [Mycobacterium tuberculosis SUMu011]
Length=118

 Score = 54.7 bits (130),  Expect = 4e-06, Method: Compositional matrix adjust.
 Identities = 33/101 (33%), Positives = 50/101 (50%), Gaps = 1/101 (0%)

Query  7    RGEVWWCEMAEIGRRPVVVLSRDAAIPRLRRALVAPCTTTIRGLASEVVLEPGSDPIPRR  66
            RGE+W+      G RPV+VL+RD    R+   +V   T T RGL SE+ L    + +P  
Sbjct  19   RGELWFAATPG-GDRPVLVLTRDPVADRIGAVVVVALTRTRRGLVSELELTAVENRVPSD  77

Query  67   SAVNLDSVESVSVAVLVNRLGRLADIRMRAICTALEVAVDC  107
              VN D++ ++       R+ RL+  R+   C  L  +  C
Sbjct  78   CVVNFDNIHTLPRTAFRRRITRLSPARLHEACQTLRASTGC  118


>gi|111025169|ref|YP_707589.1| growth inhibitor PemK [Rhodococcus jostii RHA1]
 gi|110824148|gb|ABG99431.1| probable growth inhibitor PemK [Rhodococcus jostii RHA1]
Length=99

 Score = 53.1 bits (126),  Expect = 1e-05, Method: Compositional matrix adjust.
 Identities = 32/86 (38%), Positives = 52/86 (61%), Gaps = 1/86 (1%)

Query  21   RPVVVLSRDAAIPRLRRALVAPCTTTIRGLASEVVLEPGSDPIPRRSAVNLDSVESVSVA  80
            RPV+VL+R+   P L R  VAP T T+RGL++EV + P ++ + + S V+ D++ ++ V+
Sbjct  13   RPVLVLTRELVRPHLSRVTVAPITGTVRGLSTEVPVGP-ANGLEKESVVSCDNIVTIPVS  71

Query  81   VLVNRLGRLADIRMRAICTALEVAVD  106
             L   LG     +  A+ TA+  A D
Sbjct  72   ALGRGLGFFFPSQEAALTTAIRAAFD  97


>gi|333989865|ref|YP_004522479.1| hypothetical protein JDM601_1225 [Mycobacterium sp. JDM601]
 gi|333485833|gb|AEF35225.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=103

 Score = 52.0 bits (123),  Expect = 3e-05, Method: Compositional matrix adjust.
 Identities = 32/94 (35%), Positives = 57/94 (61%), Gaps = 2/94 (2%)

Query  14   EMAEIGR-RPVVVLSRDAAIPRLRRALVAPCTTTIRGLASEVVLEPGSDPIPRRSAVNLD  72
             +A++ R RPV++L+ +   P L    VAP TTT+RGL++E  +   ++ + + S V+ D
Sbjct  5    HIAQLDRARPVLILTHEVVRPHLTNVTVAPITTTVRGLSTEFPVG-AANGLNQPSVVSCD  63

Query  73   SVESVSVAVLVNRLGRLADIRMRAICTALEVAVD  106
            ++++V VA L  ++G L D +  A+  A+  A D
Sbjct  64   NIQTVPVADLGRQIGYLFDSQEPALADAIGNAFD  97


>gi|284030849|ref|YP_003380780.1| transcriptional modulator of MazE/toxin, MazF [Kribbella flavida 
DSM 17836]
 gi|283810142|gb|ADB31981.1| transcriptional modulator of MazE/toxin, MazF [Kribbella flavida 
DSM 17836]
Length=101

 Score = 50.4 bits (119),  Expect = 9e-05, Method: Compositional matrix adjust.
 Identities = 31/88 (36%), Positives = 53/88 (61%), Gaps = 1/88 (1%)

Query  21   RPVVVLSRDAAIPRLRRALVAPCTTTIRGLASEVVLEPGSDPIPRRSAVNLDSVESVSVA  80
            RPVVVL+R+   PRL    VAP T+T+RGL++EV++ P +  +   SA++ D+++++   
Sbjct  13   RPVVVLTRELIRPRLTNVTVAPITSTVRGLSTEVLVGPQNG-LDHPSAISCDNIQTIPKL  71

Query  81   VLVNRLGRLADIRMRAICTALEVAVDCS  108
             L   +G L   +  A+  A+ +A D  
Sbjct  72   QLGRLIGYLLPDQEPALTEAVTLAFDLD  99


>gi|31792295|ref|NP_854788.1| hypothetical protein Mb1132c [Mycobacterium bovis AF2122/97]
 gi|121637033|ref|YP_977256.1| hypothetical protein BCG_1162c [Mycobacterium bovis BCG str. 
Pasteur 1173P2]
 gi|224989506|ref|YP_002644193.1| hypothetical protein JTY_1135 [Mycobacterium bovis BCG str. Tokyo 
172]
 27 more sequence titles
 Length=103

 Score = 48.5 bits (114),  Expect = 3e-04, Method: Compositional matrix adjust.
 Identities = 31/94 (33%), Positives = 57/94 (61%), Gaps = 2/94 (2%)

Query  14   EMAEIGR-RPVVVLSRDAAIPRLRRALVAPCTTTIRGLASEVVLEPGSDPIPRRSAVNLD  72
             +A++ + RPV++L+R+   P L    VAP TTT+RGLA+EV ++   + + + S V+ D
Sbjct  5    HIAQLDKARPVLILTREVVRPHLTNVTVAPITTTVRGLATEVPVD-AVNGLNQPSVVSCD  63

Query  73   SVESVSVAVLVNRLGRLADIRMRAICTALEVAVD  106
            +++++ V  L  ++G L   +  A+  A+  A D
Sbjct  64   NIQTIPVCDLGRQIGYLLASQEPALAEAIGNAFD  97


>gi|289583045|ref|YP_003481511.1| MazF family transcriptional regulator [Natrialba magadii ATCC 
43099]
 gi|289532598|gb|ADD06949.1| transcriptional modulator of MazE/toxin, MazF [Natrialba magadii 
ATCC 43099]
Length=117

 Score = 48.1 bits (113),  Expect = 5e-04, Method: Compositional matrix adjust.
 Identities = 34/102 (34%), Positives = 50/102 (50%), Gaps = 7/102 (6%)

Query  5    PARGEVWWCEMAEIGRRPVVVLSRDAAIPRLRRALVAPCTTTIRGLASEVVLEPGSDPIP  64
            PA G     EM +   RP VV+  D         +VAP T T RG   EV++E    P  
Sbjct  19   PAEGH----EMKKT--RPAVVVQNDVGNKNASTTIVAPATGTYRGYPFEVLVEAAKSPFE  72

Query  65   RRSAVNLDSVESVSVAVLVNR-LGRLADIRMRAICTALEVAV  105
            + S++ LD V  VS+   ++  LG L    M A+  AL++++
Sbjct  73   KDSSIRLDQVRVVSIEKRIHSVLGSLDTETMEAVDEALKLSL  114


>gi|308370063|ref|ZP_07420166.2| toxin [Mycobacterium tuberculosis SUMu002]
 gi|308373036|ref|ZP_07430806.2| toxin [Mycobacterium tuberculosis SUMu005]
 gi|308325465|gb|EFP14316.1| toxin [Mycobacterium tuberculosis SUMu002]
 gi|308338998|gb|EFP27849.1| toxin [Mycobacterium tuberculosis SUMu005]
Length=104

 Score = 47.8 bits (112),  Expect = 6e-04, Method: Compositional matrix adjust.
 Identities = 31/94 (33%), Positives = 56/94 (60%), Gaps = 2/94 (2%)

Query  14   EMAEIGR-RPVVVLSRDAAIPRLRRALVAPCTTTIRGLASEVVLEPGSDPIPRRSAVNLD  72
             +A++ + RPV++L+R+   P L    VAP TTT+RGLA+EV ++   + + + S V+ D
Sbjct  6    HIAQLDKARPVLILTREVVRPHLTNVTVAPITTTVRGLATEVPVD-AVNGLNQPSVVSCD  64

Query  73   SVESVSVAVLVNRLGRLADIRMRAICTALEVAVD  106
            + +++ V  L  ++G L   +  A+  A+  A D
Sbjct  65   NTQTIPVCDLGRQIGYLLASQEPALAEAIGNAFD  98


>gi|15608242|ref|NP_215618.1| hypothetical protein Rv1102c [Mycobacterium tuberculosis H37Rv]
 gi|15840541|ref|NP_335578.1| hypothetical protein MT1134 [Mycobacterium tuberculosis CDC1551]
 gi|148660888|ref|YP_001282411.1| hypothetical protein MRA_1113 [Mycobacterium tuberculosis H37Ra]
 44 more sequence titles
 Length=103

 Score = 47.8 bits (112),  Expect = 6e-04, Method: Compositional matrix adjust.
 Identities = 31/94 (33%), Positives = 56/94 (60%), Gaps = 2/94 (2%)

Query  14   EMAEIGR-RPVVVLSRDAAIPRLRRALVAPCTTTIRGLASEVVLEPGSDPIPRRSAVNLD  72
             +A++ + RPV++L+R+   P L    VAP TTT+RGLA+EV ++   + + + S V+ D
Sbjct  5    HIAQLDKARPVLILTREVVRPHLTNVTVAPITTTVRGLATEVPVD-AVNGLNQPSVVSCD  63

Query  73   SVESVSVAVLVNRLGRLADIRMRAICTALEVAVD  106
            + +++ V  L  ++G L   +  A+  A+  A D
Sbjct  64   NTQTIPVCDLGRQIGYLLASQEPALAEAIGNAFD  97


>gi|320326762|gb|EFW82805.1| plasmid maintenance protein [Pseudomonas syringae pv. glycinea 
str. race 4]
 gi|330892210|gb|EGH24871.1| plasmid maintenance protein [Pseudomonas syringae pv. mori str. 
301020]
Length=108

 Score = 47.4 bits (111),  Expect = 7e-04, Method: Compositional matrix adjust.
 Identities = 38/108 (36%), Positives = 54/108 (50%), Gaps = 15/108 (13%)

Query  7    RGEVWWCEM-----AEIGR-RPVVVLSRDAAIPRLRRALVAPCT-TTIRGLASE--VVLE  57
            RGEVWW E      +EI + RP V++S D+A   L R +V P T +T R    E  + LE
Sbjct  3    RGEVWWVEFDPSVGSEIKKTRPAVIVSNDSANRHLARVVVVPLTSSTERTYPGEALITLE  62

Query  58   PGSDPIPRRSAVNLDSVESVSVAVLVNRLGRLADIRMRAICTALEVAV  105
              S      S    D + +     L NRLG+L+ + M A+  A+ V +
Sbjct  63   GQS------SKAMADQIMAADKKRLKNRLGKLSKVDMVAVENAISVHL  104


>gi|284042400|ref|YP_003392740.1| MazF family transcriptional regulator [Conexibacter woesei DSM 
14684]
 gi|283946621|gb|ADB49365.1| transcriptional modulator of MazE/toxin, MazF [Conexibacter woesei 
DSM 14684]
Length=82

 Score = 47.4 bits (111),  Expect = 8e-04, Method: Compositional matrix adjust.
 Identities = 36/104 (35%), Positives = 48/104 (47%), Gaps = 26/104 (25%)

Query  5    PARGEVWWCEMAEIGRRPVVVLSRDAAIPRLRRALVAPCTTTIRGLASEVVLEPGSDP-I  63
            P +GEVWW E AE  RRPV+V++R  AIP                         G+D  +
Sbjct  4    PRQGEVWWAE-AEDKRRPVLVVTRTEAIPL------------------------GADEGL  38

Query  64   PRRSAVNLDSVESVSVAVLVNRLGRLADIRMRAICTALEVAVDC  107
            P   A + D+V+ V   +L  R+G L   R   IC AL+   DC
Sbjct  39   PVDCAASFDNVQPVERRLLTRRVGVLPPQRRHEICRALDALADC  82


>gi|317125701|ref|YP_004099813.1| PemK family protein [Intrasporangium calvum DSM 43043]
 gi|315589789|gb|ADU49086.1| PemK family protein [Intrasporangium calvum DSM 43043]
Length=104

 Score = 47.0 bits (110),  Expect = 9e-04, Method: Compositional matrix adjust.
 Identities = 33/86 (39%), Positives = 51/86 (60%), Gaps = 1/86 (1%)

Query  21   RPVVVLSRDAAIPRLRRALVAPCTTTIRGLASEVVLEPGSDPIPRRSAVNLDSVESVSVA  80
            RP +VL+R+AA   + +  VAP TTT++GL+SEV + P  + +    AV LD+V +V V 
Sbjct  13   RPALVLTREAARGAMTKVTVAPITTTVKGLSSEVRVGP-DNGLDHECAVALDNVVTVPVE  71

Query  81   VLVNRLGRLADIRMRAICTALEVAVD  106
            +L   +G L   +   +  AL +A D
Sbjct  72   LLGRTIGFLKAEQEVELARALVLAYD  97


>gi|313677683|ref|YP_004055679.1| transcriptional modulator of maze/toxin, mazf [Marivirga tractuosa 
DSM 4126]
 gi|312944381|gb|ADR23571.1| transcriptional modulator of MazE/toxin, MazF [Marivirga tractuosa 
DSM 4126]
Length=110

 Score = 47.0 bits (110),  Expect = 0.001, Method: Compositional matrix adjust.
 Identities = 29/91 (32%), Positives = 46/91 (51%), Gaps = 7/91 (7%)

Query  6   ARGEVWWCEM------AEIGRRPVVVLSRDAAIPRLRRALVAPCTTTIRGLASEVVLEPG  59
            + E+W   +       + G RPVV+LS + A   LR  +V P TT ++G     VLEP 
Sbjct  2   KQAEIWNVNLNPVKGSEQAGFRPVVILSGNLANEFLRTIIVCPLTTKVKGYKGNPVLEPD  61

Query  60  -SDPIPRRSAVNLDSVESVSVAVLVNRLGRL  89
             + +  +S V +  + S+S    VN+LG +
Sbjct  62  IKNGLKEKSEVLVFHIRSISKDRFVNKLGEV  92


>gi|345005711|ref|YP_004808564.1| transcriptional modulator of MazE/toxin, MazF [halophilic archaeon 
DL31]
 gi|344321337|gb|AEN06191.1| transcriptional modulator of MazE/toxin, MazF [halophilic archaeon 
DL31]
Length=117

 Score = 47.0 bits (110),  Expect = 0.001, Method: Compositional matrix adjust.
 Identities = 34/102 (34%), Positives = 50/102 (50%), Gaps = 7/102 (6%)

Query  5    PARGEVWWCEMAEIGRRPVVVLSRDAAIPRLRRALVAPCTTTIRGLASEVVLEPGSDPIP  64
            PA G     EM +   RP VV+  D         +VAP T T RG   EV++E    P  
Sbjct  19   PAEGH----EMKKT--RPAVVVQNDVGNNNSTTTIVAPATGTYRGYPFEVLVEADESPFR  72

Query  65   RRSAVNLDSVESVSVAVLVNRL-GRLADIRMRAICTALEVAV  105
            + S+V LD +  VS+   ++ + GRL    M  +  AL+++V
Sbjct  73   KDSSVRLDQIRVVSIETRIHSVAGRLDSETMDDVDEALKLSV  114


>gi|311745739|ref|ZP_07719524.1| toxin-antitoxin system, toxin component, MazF family [Algoriphagus 
sp. PR1]
 gi|126575182|gb|EAZ79532.1| toxin-antitoxin system, toxin component, MazF family [Algoriphagus 
sp. PR1]
Length=110

 Score = 46.2 bits (108),  Expect = 0.002, Method: Compositional matrix adjust.
 Identities = 26/103 (26%), Positives = 53/103 (52%), Gaps = 7/103 (6%)

Query  7    RGEVWWCEM------AEIGRRPVVVLSRDAAIPRLRRALVAPCTTTIRGLASEVVLEPGS  60
            +GE+W  ++       + GRRPVV+LS +     L+  + AP TT I+      +L+P +
Sbjct  3    QGEIWMSDLNPSVGSEQAGRRPVVILSGNLMNKFLQVVITAPLTTKIKNYQGNPILKPST  62

Query  61   -DPIPRRSAVNLDSVESVSVAVLVNRLGRLADIRMRAICTALE  102
             + +   S + +  + S+S   L+ ++G ++   ++   T L+
Sbjct  63   KNGLKLESELLVFHIRSISKKRLIEKVGEISSDELKIALTTLQ  105


>gi|110668140|ref|YP_657951.1| PemK-like growth inhibitor protein (MazF protein) [Haloquadratum 
walsbyi DSM 16790]
 gi|109625887|emb|CAJ52328.1| PemK-like growth inhibitor protein (MazF protein) [Haloquadratum 
walsbyi DSM 16790]
Length=117

 Score = 45.1 bits (105),  Expect = 0.004, Method: Compositional matrix adjust.
 Identities = 34/102 (34%), Positives = 50/102 (50%), Gaps = 7/102 (6%)

Query  5    PARGEVWWCEMAEIGRRPVVVLSRDAAIPRLRRALVAPCTTTIRGLASEVVLEPGSDPIP  64
            PA G     EM +   RP VV+  D      +  +VAP T T R    EV++E    P  
Sbjct  19   PAEGH----EMRKT--RPAVVVQNDVGNKNSKTTIVAPATGTYRSYPFEVLVEASDSPFE  72

Query  65   RRSAVNLDSVESVSVAVLVNRL-GRLADIRMRAICTALEVAV  105
            +  +V LD +  VSV   ++ + G LAD  +  I  AL+V++
Sbjct  73   KDFSVRLDQIRVVSVEKRIHSVAGSLADSTVGEIDDALKVSL  114


>gi|339729055|emb|CCC40264.1| PemK domain protein [Haloquadratum walsbyi C23]
Length=117

 Score = 44.7 bits (104),  Expect = 0.005, Method: Compositional matrix adjust.
 Identities = 33/102 (33%), Positives = 50/102 (50%), Gaps = 7/102 (6%)

Query  5    PARGEVWWCEMAEIGRRPVVVLSRDAAIPRLRRALVAPCTTTIRGLASEVVLEPGSDPIP  64
            PA G     EM +   RP VV+  D      +  +VAP T T R    EV++E    P  
Sbjct  19   PAEGH----EMQKT--RPAVVVQNDVGNKNSKITIVAPATGTYRSYPFEVLVEASDSPFE  72

Query  65   RRSAVNLDSVESVSVAVLVNRL-GRLADIRMRAICTALEVAV  105
            +  +V LD +  VSV   ++ + G LAD  +  I  AL++++
Sbjct  73   KDFSVRLDQIRVVSVEKQIHSVAGSLADSTVGEIDDALKLSL  114


>gi|166363781|ref|YP_001656054.1| PemK-like protein [Microcystis aeruginosa NIES-843]
 gi|166368557|ref|YP_001660830.1| PemK family protein [Microcystis aeruginosa NIES-843]
 gi|166086154|dbj|BAG00862.1| PemK-like protein [Microcystis aeruginosa NIES-843]
 gi|166090930|dbj|BAG05638.1| PemK family protein [Microcystis aeruginosa NIES-843]
Length=118

 Score = 44.3 bits (103),  Expect = 0.007, Method: Compositional matrix adjust.
 Identities = 29/109 (27%), Positives = 53/109 (49%), Gaps = 9/109 (8%)

Query  7    RGEVWWCEMAE------IGRRPVVVLSRDA-AIPRLRRALVAPCTTTIR--GLASEVVLE  57
            +GE++W ++ E         RP VV+  DA    ++   +V P TT +R       V+L 
Sbjct  5    QGEIYWIDLGEPQGSEPAYLRPCVVVQNDALNQSQIGTVIVCPLTTNLRRAKAIGNVLLN  64

Query  58   PGSDPIPRRSAVNLDSVESVSVAVLVNRLGRLADIRMRAICTALEVAVD  106
             G   +P  S VN+  V +V   +L   +GRL+  +++ I   + + ++
Sbjct  65   EGEGNLPESSVVNVSQVFTVDKRLLTESIGRLSREKIKLIIQGINLVIE  113


>gi|344219327|gb|AEM99957.1| hypothetical protein MTCTRI2_1534 [Mycobacterium tuberculosis 
CTRI-2]
Length=105

 Score = 43.9 bits (102),  Expect = 0.007, Method: Compositional matrix adjust.
 Identities = 32/101 (32%), Positives = 53/101 (53%), Gaps = 4/101 (3%)

Query  5    PARGEVWWCEMAEIGRRPVVVLSRDAAIPRLRRALVAPCTTTIRGLASEVVLEPGSDPIP  64
            P RG+V+ C++   G +P +++S +A        +    TTT R + + V + P SDP+ 
Sbjct  4    PLRGQVYRCDLG-YGAKPWLIVSNNARNRHTADVVAVRLTTTRRTIPTWVAMGP-SDPLT  61

Query  65   RRSAVNLDSVESVSVAVLVNRLGRLADIRMRAICTALEVAV  105
            R   VN D++E++    L + LG +    M  I TAL  A+
Sbjct  62   RY--VNADNIETLGKDELGDYLGEVTPATMNKINTALATAL  100


>gi|344201304|ref|YP_004785630.1| transcriptional modulator of MazE/toxin, MazF [Acidithiobacillus 
ferrivorans SS3]
 gi|343776748|gb|AEM49304.1| transcriptional modulator of MazE/toxin, MazF [Acidithiobacillus 
ferrivorans SS3]
Length=108

 Score = 43.5 bits (101),  Expect = 0.009, Method: Compositional matrix adjust.
 Identities = 35/110 (32%), Positives = 51/110 (47%), Gaps = 11/110 (10%)

Query  7    RGEVWWCEM-----AEIGR-RPVVVLSRDAAIPRLRRALVAPCTT-TIRGLASEVVLEPG  59
            RGEVWW E       EI + RP V++S DAA   L R +V P T+ T R    E ++   
Sbjct  3    RGEVWWVEFDPSVGGEIRKTRPAVIVSNDAANRNLARVVVVPLTSNTGRQYPGEALVTLA  62

Query  60   SDPIPRRSAVNLDSVESVSVAVLVNRLGRLADIRMRAICTALEVAVDCSR  109
              P         D + +   + L N +G L+   M A+ TA+ + +   R
Sbjct  63   GKP----GKAMADQIMAADKSRLKNPMGSLSKAEMTAVETAILIHLGMPR  108


>gi|159027339|emb|CAO90524.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
Length=115

 Score = 43.5 bits (101),  Expect = 0.010, Method: Compositional matrix adjust.
 Identities = 33/114 (29%), Positives = 57/114 (50%), Gaps = 11/114 (9%)

Query  4    LPARGEVWWCEM-----AEIGR-RPVVVLSRDAAIPRLRRALVAPCT---TTIRGLASEV  54
            +P RGE+W         AEI + RP VV+S D+ + +L   L+AP T   T        V
Sbjct  1    MPKRGEIWLVNFDPTVGAEIKKVRPAVVISSDS-VGKLPIKLIAPITDWKTYFSANFWHV  59

Query  55   VLEPGS-DPIPRRSAVNLDSVESVSVAVLVNRLGRLADIRMRAICTALEVAVDC  107
             +EP S + + + SA++   +  V +   + +LG +++I M  I  A+   ++ 
Sbjct  60   KIEPNSINGLNKASAIDTLQLRGVDLQRFIRKLGSVSEITMLEIVAAIATVIEF  113


>gi|111225278|ref|YP_716072.1| hypothetical protein FRAAL5929 [Frankia alni ACN14a]
 gi|111152810|emb|CAJ64554.1| Hypothetical protein FRAAL5929 [Frankia alni ACN14a]
Length=103

 Score = 43.5 bits (101),  Expect = 0.010, Method: Compositional matrix adjust.
 Identities = 33/93 (36%), Positives = 46/93 (50%), Gaps = 9/93 (9%)

Query  20   RRPVVVLSRDAAIPRLRRA-----LVAPCTTTIRGLASEVVLEPGSDPIPRRSAVNLDSV  74
            RRP VV+S D    RL R+     +V P T T RGL S V L PG   + + S   ++ V
Sbjct  15   RRPAVVVSAD----RLNRSRAGLSIVVPVTRTRRGLPSHVELAPGGTGLHQTSFAKVEDV  70

Query  75   ESVSVAVLVNRLGRLADIRMRAICTALEVAVDC  107
            +SVS      RLG +    +  +  AL+  +D 
Sbjct  71   KSVSQQRFARRLGVVGPDHLLRMTEALKFLLDM  103


>gi|153869667|ref|ZP_01999211.1| conserved hypothetical protein [Beggiatoa sp. PS]
 gi|152073872|gb|EDN70794.1| conserved hypothetical protein [Beggiatoa sp. PS]
Length=105

 Score = 43.1 bits (100),  Expect = 0.012, Method: Compositional matrix adjust.
 Identities = 32/104 (31%), Positives = 49/104 (48%), Gaps = 2/104 (1%)

Query  5    PARGEVWWCEMAEIGR-RPVVVLSRDAAIPRLRRALVAPCTTTIRGLASEVVLEPGSDPI  63
            P  G++W  ++    + RPVV++SR    P     +  P TT  R  A EVVL P    +
Sbjct  3    PKYGDIWLADLGLAAKTRPVVIVSRYDPEPPRALTIYIPLTTQYRNSAYEVVL-PKLRFL  61

Query  64   PRRSAVNLDSVESVSVAVLVNRLGRLADIRMRAICTALEVAVDC  107
             + S  N+  + S+    L  +LG L +  M  I  A+  A+D 
Sbjct  62   NQNSVANVQGIGSLPTIRLERKLGELPNEIMLKIKQAILFALDM  105


>gi|256848378|ref|ZP_05553821.1| regulatory protein [Lactobacillus coleohominis 101-4-CHN]
 gi|256714976|gb|EEU29954.1| regulatory protein [Lactobacillus coleohominis 101-4-CHN]
Length=116

 Score = 43.1 bits (100),  Expect = 0.014, Method: Compositional matrix adjust.
 Identities = 26/110 (24%), Positives = 55/110 (50%), Gaps = 8/110 (7%)

Query  7    RGEVWWCEMAEI------GRRPVVVLSRDAAIPRLRRALVAPCTTTIRG--LASEVVLEP  58
            RG +++  ++ +      G RPVV++  D         +VAP T  ++   L + V ++ 
Sbjct  7    RGAIYYARLSPVIGSEQGGFRPVVIVQNDVGNLHSPTMIVAPITAQMQKHRLPTHVPIKQ  66

Query  59   GSDPIPRRSAVNLDSVESVSVAVLVNRLGRLADIRMRAICTALEVAVDCS  108
                I R S + L+ + ++    L +++G+L    M+A+  AL+V++  +
Sbjct  67   NVKGIKRDSQILLEQIRTIDKQRLADQIGQLNQATMKAVNQALQVSLSLN  116


>gi|158335749|ref|YP_001516921.1| hypothetical protein AM1_2600 [Acaryochloris marina MBIC11017]
 gi|158305990|gb|ABW27607.1| conserved hypothetical protein [Acaryochloris marina MBIC11017]
Length=121

 Score = 43.1 bits (100),  Expect = 0.014, Method: Compositional matrix adjust.
 Identities = 39/115 (34%), Positives = 57/115 (50%), Gaps = 11/115 (9%)

Query  3    ALPARGEVWWCEM-----AEIGR-RPVVVLSRDAAIPRLRRALVAPCTTTIRGLAS---E  53
            A+P RGEVW          EI + RP +V+S D A+ +L   LVAP T      A     
Sbjct  8    AVPKRGEVWLVNFDPTLGTEIKKTRPAIVISSD-AVGKLPIKLVAPVTDWKPYFAKNIWH  66

Query  54   VVLEPGSDP-IPRRSAVNLDSVESVSVAVLVNRLGRLADIRMRAICTALEVAVDC  107
            V LEP +D  + + S+V+   +  V    L+ RLG L+D  M +I  A+   ++ 
Sbjct  67   VKLEPSADNGLSKLSSVDALQLRGVDQQRLIRRLGYLSDEIMASIEIAIMTIIEA  121


>gi|186682027|ref|YP_001865223.1| MazF family transcripitonal regulator [Nostoc punctiforme PCC 
73102]
 gi|186464479|gb|ACC80280.1| transcriptional modulator of MazE/toxin, MazF [Nostoc punctiforme 
PCC 73102]
Length=117

 Score = 43.1 bits (100),  Expect = 0.014, Method: Compositional matrix adjust.
 Identities = 35/112 (32%), Positives = 55/112 (50%), Gaps = 9/112 (8%)

Query  7    RGEVWWCEM-----AEIGRRPVVVLSRDAAIPRLRRALVAPCTTTIRGLASE---VVLEP  58
            RGEVW   +      EI ++   ++  D AI  L   ++ P T      A     V LEP
Sbjct  3    RGEVWLVNLDPTVGTEISKKRPCIIVNDDAIGILPLKVIVPVTDWKERYAVRPWMVRLEP  62

Query  59   GS-DPIPRRSAVNLDSVESVSVAVLVNRLGRLADIRMRAICTALEVAVDCSR  109
             + + + + S V+   + SVS   LV +LG+++D  M+ IC AL V ++ S 
Sbjct  63   STENSLAKVSGVDTFQIRSVSETRLVRKLGQISDSEMQLICQALAVVLNISH  114


>gi|148264060|ref|YP_001230766.1| transcriptional modulator of MazE/toxin, MazF [Geobacter uraniireducens 
Rf4]
 gi|146397560|gb|ABQ26193.1| transcriptional modulator of MazE/toxin, MazF [Geobacter uraniireducens 
Rf4]
Length=118

 Score = 42.7 bits (99),  Expect = 0.016, Method: Compositional matrix adjust.
 Identities = 28/109 (26%), Positives = 55/109 (51%), Gaps = 9/109 (8%)

Query  7    RGEVWWCEM-----AEIGRRPVVVLSRDAAIPR--LRRALVAPCTTTIR--GLASEVVLE  57
            +G+++W E+     +E G +   V+ ++    R  +R  LV P TT ++       V+L+
Sbjct  5    QGDIYWIELDEPEGSEPGYKHPHVIVQNNLFNRSQIRTVLVCPLTTNLKRASAPGNVLLD  64

Query  58   PGSDPIPRRSAVNLDSVESVSVAVLVNRLGRLADIRMRAICTALEVAVD  106
                 +P++S VN+  V +V  A L   +G L+  R+  I   +++ +D
Sbjct  65   KKESNLPKQSVVNVTQVFTVDKAQLDEYVGTLSSKRITEILNGIKLVLD  113


>gi|282882941|ref|ZP_06291546.1| toxin-antitoxin system, toxin component, MazF family [Peptoniphilus 
lacrimalis 315-B]
 gi|281297352|gb|EFA89843.1| toxin-antitoxin system, toxin component, MazF family [Peptoniphilus 
lacrimalis 315-B]
Length=114

 Score = 42.7 bits (99),  Expect = 0.018, Method: Compositional matrix adjust.
 Identities = 27/107 (26%), Positives = 55/107 (52%), Gaps = 8/107 (7%)

Query  7    RGEVWWCEMAEI------GRRPVVVLSRDAAIPRLRRALVAPCTTTIRG--LASEVVLEP  58
            RG++++ +++ +      G RPVVV+  D         +VA  T+ +    L + V ++ 
Sbjct  5    RGDIFYADLSPVIGSEQGGVRPVVVVQNDVGNKYSPTIIVAAITSQLNKAKLPTHVNVKA  64

Query  59   GSDPIPRRSAVNLDSVESVSVAVLVNRLGRLADIRMRAICTALEVAV  105
             + P+P+ S + L+ + ++    L  R+GR  D  M  I  A++V++
Sbjct  65   KTVPLPKNSVILLEQIRTIDKKRLRERIGRFGDDVMTVIDDAIKVSL  111


>gi|15608633|ref|NP_216011.1| hypothetical protein Rv1495 [Mycobacterium tuberculosis H37Rv]
 gi|15840958|ref|NP_335995.1| hypothetical protein MT1542 [Mycobacterium tuberculosis CDC1551]
 gi|31792691|ref|NP_855184.1| hypothetical protein Mb1532 [Mycobacterium bovis AF2122/97]
 77 more sequence titles
 Length=105

 Score = 42.7 bits (99),  Expect = 0.020, Method: Compositional matrix adjust.
 Identities = 31/101 (31%), Positives = 52/101 (52%), Gaps = 4/101 (3%)

Query  5    PARGEVWWCEMAEIGRRPVVVLSRDAAIPRLRRALVAPCTTTIRGLASEVVLEPGSDPIP  64
            P RG+V+ C++   G +P +++S +A        +    TTT R + + V + P SDP+ 
Sbjct  4    PLRGQVYRCDLG-YGAKPWLIVSNNARNRHTADVVAVRLTTTRRTIPTWVAMGP-SDPL-  60

Query  65   RRSAVNLDSVESVSVAVLVNRLGRLADIRMRAICTALEVAV  105
                VN D++E++    L + LG +    M  I TAL  A+
Sbjct  61   -TGYVNADNIETLGKDELGDYLGEVTPATMNKINTALATAL  100


>gi|289753579|ref|ZP_06512957.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
 gi|289694166|gb|EFD61595.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
Length=105

 Score = 42.7 bits (99),  Expect = 0.020, Method: Compositional matrix adjust.
 Identities = 31/101 (31%), Positives = 51/101 (51%), Gaps = 4/101 (3%)

Query  5    PARGEVWWCEMAEIGRRPVVVLSRDAAIPRLRRALVAPCTTTIRGLASEVVLEPGSDPIP  64
            P RG+V+ C++   G +P +++S +A        +    TTT R + + V + P SDP+ 
Sbjct  4    PLRGQVYRCDLG-YGAKPWLIVSNNARNRHTADVVAVRLTTTRRTIPTWVAMGP-SDPL-  60

Query  65   RRSAVNLDSVESVSVAVLVNRLGRLADIRMRAICTALEVAV  105
                VN D++E+     L + LG +    M  I TAL  A+
Sbjct  61   -TGYVNADNIETFGKDELGDYLGEVTPATMNKINTALATAL  100


>gi|308270639|emb|CBX27251.1| Uncharacterized protein Rv1991c/MT2046 [uncultured Desulfobacterium 
sp.]
Length=131

 Score = 42.4 bits (98),  Expect = 0.021, Method: Compositional matrix adjust.
 Identities = 27/109 (25%), Positives = 57/109 (53%), Gaps = 9/109 (8%)

Query  7    RGEVWWCEMAEIG------RRPVVVLSRD-AAIPRLRRALVAPCTTTI-RGLA-SEVVLE  57
            +GE++W ++AE        R P +V+  +     R+   +V   T  + R  A   V+L 
Sbjct  19   QGEIFWIDLAEPKGSEPGYRHPYIVIQNNLFNASRINTVVVCSLTGNLNRAKAPGNVLLN  78

Query  58   PGSDPIPRRSAVNLDSVESVSVAVLVNRLGRLADIRMRAICTALEVAVD  106
             G   +P+++ VN+  + +V+ + LV +LG++++ RM  I   +++  +
Sbjct  79   KGEANLPQKNVVNISQIFTVNKSDLVEKLGQVSEKRMTEILDGIKLLTE  127


>gi|251772678|gb|EES53242.1| transcriptional modulator of MazE/toxin, MazF [Leptospirillum 
ferrodiazotrophum]
Length=108

 Score = 42.4 bits (98),  Expect = 0.024, Method: Compositional matrix adjust.
 Identities = 36/110 (33%), Positives = 51/110 (47%), Gaps = 11/110 (10%)

Query  7    RGEVWWCEM-----AEIGR-RPVVVLSRDAAIPRLRRALVAPCTT-TIRGLASEVVLEPG  59
            RGEVWW E      +EI + RP V++S DAA   L R +V P T+ T R    E  +   
Sbjct  3    RGEVWWVEFDPSVGSEIRKTRPAVIVSNDAANRNLARVVVVPLTSNTGRLYPGEAFVTLS  62

Query  60   SDPIPRRSAVNLDSVESVSVAVLVNRLGRLADIRMRAICTALEVAVDCSR  109
              P         D + +   + L N +G L+   M A+ TA+ V +   R
Sbjct  63   GKP----GKAMADQIMAADKSRLKNLMGTLSKTDMTALETAILVHLGMPR  108


>gi|336173464|ref|YP_004580602.1| transcriptional modulator of MazE/toxin, MazF [Lacinutrix sp. 
5H-3-7-4]
 gi|334728036|gb|AEH02174.1| transcriptional modulator of MazE/toxin, MazF [Lacinutrix sp. 
5H-3-7-4]
Length=110

 Score = 42.0 bits (97),  Expect = 0.028, Method: Compositional matrix adjust.
 Identities = 25/90 (28%), Positives = 47/90 (53%), Gaps = 7/90 (7%)

Query  7   RGEVWWCEM------AEIGRRPVVVLSRDAAIPRLRRALVAPCTTTIRGLASEVVLEPGS  60
           +GE+W   +       + GRRP V++S +     L+  +V P TT+++     ++LEP +
Sbjct  3   QGEIWELYLNPTKGSEQSGRRPAVIISGNMLNTYLQVVIVCPLTTSVKNYKGNLILEPNA  62

Query  61  -DPIPRRSAVNLDSVESVSVAVLVNRLGRL  89
            + + + S V    V SVS   L  ++G++
Sbjct  63  INGLAKTSEVLTFHVRSVSKTRLDKKIGKI  92


>gi|302547010|ref|ZP_07299352.1| conserved hypothetical protein [Streptomyces hygroscopicus ATCC 
53653]
 gi|302464628|gb|EFL27721.1| conserved hypothetical protein [Streptomyces himastatinicus ATCC 
53653]
Length=134

 Score = 42.0 bits (97),  Expect = 0.029, Method: Compositional matrix adjust.
 Identities = 35/107 (33%), Positives = 49/107 (46%), Gaps = 11/107 (10%)

Query  7    RGEVWWCEMAEIGRRPVVVLSRDAAIPRLRRALVAPCTTTIRGLASEV-VLEPGSDP---  62
            RGEVWW +  E  RRPVV+LS + +       +VAP    I GL  EV V  P   P   
Sbjct  3    RGEVWWVDFDE--RRPVVLLSDEESSGFQAMQVVAPAGVDISGLGVEVAVGAPEGLPFEG  60

Query  63   -----IPRRSAVNLDSVESVSVAVLVNRLGRLADIRMRAICTALEVA  104
                  PR        + +V+   L+ R G L+ +++  +  AL  A
Sbjct  61   VLRFAFPRPGFTPCTWLTTVAQDDLIERAGVLSSVKLSEVGEALRAA  107


>gi|333979032|ref|YP_004516977.1| transcriptional modulator of MazE/toxin, MazF [Desulfotomaculum 
kuznetsovii DSM 6115]
 gi|333822513|gb|AEG15176.1| transcriptional modulator of MazE/toxin, MazF [Desulfotomaculum 
kuznetsovii DSM 6115]
Length=113

 Score = 42.0 bits (97),  Expect = 0.033, Method: Compositional matrix adjust.
 Identities = 31/95 (33%), Positives = 46/95 (49%), Gaps = 7/95 (7%)

Query  3   ALPARGEVWWCEM------AEIGRRPVVVLSRDAAIPR-LRRALVAPCTTTIRGLASEVV  55
           A P RGEVW  ++       + GRRP +V+S D          +V P TT  +G+   V 
Sbjct  2   ATPLRGEVWLVDLNPVRGHEQAGRRPALVVSVDMFNSGPAELVVVLPITTKDKGIPLHVR  61

Query  56  LEPGSDPIPRRSAVNLDSVESVSVAVLVNRLGRLA  90
           ++P    +   S V  + + SVS   L  RLGR++
Sbjct  62  IDPPEGGVKETSFVKCEDIRSVSTERLTARLGRVS  96


>gi|17227833|ref|NP_484381.1| hypothetical protein all0337 [Nostoc sp. PCC 7120]
 gi|17129682|dbj|BAB72295.1| all0337 [Nostoc sp. PCC 7120]
Length=121

 Score = 41.6 bits (96),  Expect = 0.037, Method: Compositional matrix adjust.
 Identities = 34/104 (33%), Positives = 48/104 (47%), Gaps = 2/104 (1%)

Query  5    PARGEVWWCEMAEIGR-RPVVVLSRDAAIPRLRRALVAPCTTTIRGLASEVVLEPGSDPI  63
            P  GEVW  ++    + RPVV++SR    P     +  P TT  RG A EV L P    +
Sbjct  3    PKPGEVWLVDLGLAAKARPVVIVSRYDLTPPRALVIYIPITTQNRGSAYEVEL-PVLSFL  61

Query  64   PRRSAVNLDSVESVSVAVLVNRLGRLADIRMRAICTALEVAVDC  107
             + S  N+  + S+    L  +LG L+   M  I  AL   +D 
Sbjct  62   RQGSVANVQGLGSIPSVRLERKLGELSKETMLEIKQALMFTLDL  105


>gi|302546980|ref|ZP_07299322.1| conserved hypothetical protein [Streptomyces hygroscopicus ATCC 
53653]
 gi|302464598|gb|EFL27691.1| conserved hypothetical protein [Streptomyces himastatinicus ATCC 
53653]
Length=134

 Score = 41.6 bits (96),  Expect = 0.044, Method: Compositional matrix adjust.
 Identities = 25/48 (53%), Positives = 27/48 (57%), Gaps = 2/48 (4%)

Query  7   RGEVWWCEMAEIGRRPVVVLSRDAAIPRLRRALVAPCTTTIRGLASEV  54
           RGEVWW E  E  RRPVV+LS D A       +VAP    I GL  EV
Sbjct  27  RGEVWWVEFDE--RRPVVLLSGDDASGIQVMQVVAPAGVDISGLGVEV  72


>gi|302555807|ref|ZP_07308149.1| conserved hypothetical protein [Streptomyces viridochromogenes 
DSM 40736]
 gi|302473425|gb|EFL36518.1| conserved hypothetical protein [Streptomyces viridochromogenes 
DSM 40736]
Length=134

 Score = 41.2 bits (95),  Expect = 0.050, Method: Compositional matrix adjust.
 Identities = 35/107 (33%), Positives = 49/107 (46%), Gaps = 11/107 (10%)

Query  7    RGEVWWCEMAEIGRRPVVVLSRDAAIPRLRRALVAPCTTTIRGLASEV-VLEPGSDP---  62
            RGEVWW +  E  RRPVV+LS + +       +VAP    I GL  EV V  P   P   
Sbjct  3    RGEVWWVDFDE--RRPVVLLSDEESSGFQAMQVVAPAGVDISGLGVEVAVGAPEGLPFEG  60

Query  63   -----IPRRSAVNLDSVESVSVAVLVNRLGRLADIRMRAICTALEVA  104
                  PR        + +V+   L+ R G L+ +++  +  AL  A
Sbjct  61   VLRFAFPRPGFTPCTWLTTVARDDLIERAGVLSSVKLSEVGEALRAA  107



Lambda     K      H
   0.324    0.135    0.404 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 129509500864


  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
    Posted date:  Sep 5, 2011  4:36 AM
  Number of letters in database: 5,219,829,388
  Number of sequences in database:  15,229,318



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40