BLASTP 2.2.25+


Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           15,229,318 sequences; 5,219,829,388 total letters



Query= Rv1944c

Length=196
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|15609081|ref|NP_216460.1|  hypothetical protein Rv1944c [Mycob...   398    2e-109
gi|340626954|ref|YP_004745406.1|  hypothetical protein MCAN_19611...   395    1e-108
gi|121637849|ref|YP_978072.1|  hypothetical protein BCG_1983c [My...   395    2e-108
gi|289447560|ref|ZP_06437304.1|  conserved hypothetical protein [...   394    3e-108
gi|167970541|ref|ZP_02552818.1|  hypothetical protein MtubH3_2190...   328    2e-88 
gi|294996863|ref|ZP_06802554.1|  hypothetical protein Mtub2_20753...   168    4e-40 
gi|328882686|emb|CCA55925.1|  hypothetical protein SVEN_2639 [Str...  63.2    2e-08 
gi|294629548|ref|ZP_06708108.1|  SEC-C domain-containing protein ...  60.8    1e-07 
gi|302551686|ref|ZP_07304028.1|  conserved hypothetical protein [...  58.2    7e-07 
gi|21221305|ref|NP_627084.1|  hypothetical protein SCO2855 [Strep...  57.8    9e-07 
gi|289771405|ref|ZP_06530783.1|  conserved hypothetical protein [...  57.4    1e-06 
gi|344999905|ref|YP_004802759.1|  SEC-C motif domain-containing p...  55.5    4e-06 
gi|290960101|ref|YP_003491283.1|  hypothetical protein SCAB_57151...  55.5    4e-06 
gi|254389836|ref|ZP_05005060.1|  conserved hypothetical protein [...  54.7    6e-06 
gi|29831747|ref|NP_826381.1|  hypothetical protein SAV_5204 [Stre...  54.7    8e-06 
gi|239988001|ref|ZP_04708665.1|  hypothetical protein SrosN1_1189...  54.3    8e-06 
gi|291444982|ref|ZP_06584372.1|  conserved hypothetical protein [...  54.3    9e-06 
gi|297199954|ref|ZP_06917351.1|  conserved hypothetical protein [...  53.1    2e-05 
gi|291453881|ref|ZP_06593271.1|  conserved hypothetical protein [...  52.4    4e-05 
gi|320010615|gb|ADW05465.1|  hypothetical protein Sfla_4053 [Stre...  52.0    5e-05 
gi|297194181|ref|ZP_06911579.1|  conserved hypothetical protein [...  52.0    5e-05 
gi|297561634|ref|YP_003680608.1|  SEC-C motif domain-containing p...  51.6    6e-05 
gi|329937992|ref|ZP_08287474.1|  hypothetical protein SGM_2966 [S...  51.6    6e-05 
gi|318057145|ref|ZP_07975868.1|  hypothetical protein SSA3_04355 ...  49.3    3e-04 
gi|302521592|ref|ZP_07273934.1|  conserved hypothetical protein [...  49.3    3e-04 
gi|333024767|ref|ZP_08452831.1|  hypothetical protein STTU_2271 [...  48.5    5e-04 
gi|302560467|ref|ZP_07312809.1|  SEC-C domain-containing protein ...  46.6    0.002 
gi|332702748|ref|ZP_08422836.1|  Protein translocase subunit secA...  46.6    0.002 
gi|345038776|gb|EGW43161.1|  translocase subunit secA [Bilophila ...  45.1    0.005 
gi|317487372|ref|ZP_07946162.1|  preprotein translocase [Bilophil...  45.1    0.005 
gi|182438473|ref|YP_001826192.1|  hypothetical protein SGR_4680 [...  44.3    0.009 
gi|89895085|ref|YP_518572.1|  hypothetical protein DSY2339 [Desul...  44.3    0.010 
gi|345361123|gb|EGW93284.1|  SEC-C motif family protein [Escheric...  44.3    0.010 
gi|326779119|ref|ZP_08238384.1|  SEC-C motif domain protein [Stre...  44.3    0.010 
gi|161485608|ref|YP_387578.2|  preprotein translocase subunit Sec...  43.9    0.011 
gi|290961946|ref|YP_003493128.1|  hypothetical protein SCAB_76191...  43.9    0.012 
gi|239908281|ref|YP_002955022.1|  hypothetical protein DMR_36450 ...  42.7    0.025 
gi|114567166|ref|YP_754320.1|  hypothetical protein Swol_1651 [Sy...  42.7    0.025 
gi|289446169|ref|ZP_06435913.1|  conserved hypothetical protein [...  42.7    0.026 
gi|254480701|ref|ZP_05093948.1|  SEC-C motif domain protein [mari...  42.7    0.026 
gi|257792097|ref|YP_003182703.1|  methionine aminopeptidase, type...  42.7    0.028 
gi|340625636|ref|YP_004744088.1|  hypothetical protein MCAN_06151...  42.7    0.031 
gi|289744327|ref|ZP_06503705.1|  conserved hypothetical protein [...  42.7    0.031 
gi|148821815|ref|YP_001286569.1|  hypothetical protein TBFG_10624...  42.7    0.031 
gi|15607753|ref|NP_215127.1|  hypothetical protein Rv0613c [Mycob...  42.7    0.031 
gi|325831651|ref|ZP_08164868.1|  methionine aminopeptidase, type ...  42.4    0.033 
gi|21674062|ref|NP_662127.1|  preprotein translocase subunit SecA...  42.4    0.033 
gi|219669498|ref|YP_002459933.1|  methionine aminopeptidase, type...  42.4    0.036 
gi|338999764|ref|ZP_08638401.1|  hypothetical protein GME_16957 [...  42.4    0.038 
gi|339444461|ref|YP_004710465.1|  methionine aminopeptidase [Egge...  42.4    0.039 


>gi|15609081|ref|NP_216460.1| hypothetical protein Rv1944c [Mycobacterium tuberculosis H37Rv]
 gi|15841415|ref|NP_336452.1| hypothetical protein MT1994 [Mycobacterium tuberculosis CDC1551]
 gi|31793136|ref|NP_855629.1| hypothetical protein Mb1979c [Mycobacterium bovis AF2122/97]
 37 more sequence titles
 Length=196

 Score =  398 bits (1023),  Expect = 2e-109, Method: Compositional matrix adjust.
 Identities = 196/196 (100%), Positives = 196/196 (100%), Gaps = 0/196 (0%)

Query  1    MISDTEDFAHGDKAAPPRLRASYAACGGDAAGCWTMSDNGASRVPPVDETPAAESAEPIT  60
            MISDTEDFAHGDKAAPPRLRASYAACGGDAAGCWTMSDNGASRVPPVDETPAAESAEPIT
Sbjct  1    MISDTEDFAHGDKAAPPRLRASYAACGGDAAGCWTMSDNGASRVPPVDETPAAESAEPIT  60

Query  61   AVSLAWLPAGDYERALDLWPDFAGSDLVTGPDGPVAHPLYCRRMQQKLVEFAEAGFPGLA  120
            AVSLAWLPAGDYERALDLWPDFAGSDLVTGPDGPVAHPLYCRRMQQKLVEFAEAGFPGLA
Sbjct  61   AVSLAWLPAGDYERALDLWPDFAGSDLVTGPDGPVAHPLYCRRMQQKLVEFAEAGFPGLA  120

Query  121  VAAIRVAPFAAWCAEQGQEPDSPEARAEYAAYLTAHGDHDVMAWPPGRNQQCWCGSGHKY  180
            VAAIRVAPFAAWCAEQGQEPDSPEARAEYAAYLTAHGDHDVMAWPPGRNQQCWCGSGHKY
Sbjct  121  VAAIRVAPFAAWCAEQGQEPDSPEARAEYAAYLTAHGDHDVMAWPPGRNQQCWCGSGHKY  180

Query  181  KKCCAAASFIDTEPAP  196
            KKCCAAASFIDTEPAP
Sbjct  181  KKCCAAASFIDTEPAP  196


>gi|340626954|ref|YP_004745406.1| hypothetical protein MCAN_19611 [Mycobacterium canettii CIPT 
140010059]
 gi|340005144|emb|CCC44293.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059]
Length=196

 Score =  395 bits (1016),  Expect = 1e-108, Method: Compositional matrix adjust.
 Identities = 194/196 (99%), Positives = 195/196 (99%), Gaps = 0/196 (0%)

Query  1    MISDTEDFAHGDKAAPPRLRASYAACGGDAAGCWTMSDNGASRVPPVDETPAAESAEPIT  60
            MISDTEDFAHGDKAAPPRLRASYAACGGDA GCWTMSDNGASRVPPVDETPAAESAEPIT
Sbjct  1    MISDTEDFAHGDKAAPPRLRASYAACGGDATGCWTMSDNGASRVPPVDETPAAESAEPIT  60

Query  61   AVSLAWLPAGDYERALDLWPDFAGSDLVTGPDGPVAHPLYCRRMQQKLVEFAEAGFPGLA  120
            AVSLAWLPAGDYERALDLWPDFAGSDLVTGPDGPVAHPLYCRRMQQKLVEFAEAGFPGLA
Sbjct  61   AVSLAWLPAGDYERALDLWPDFAGSDLVTGPDGPVAHPLYCRRMQQKLVEFAEAGFPGLA  120

Query  121  VAAIRVAPFAAWCAEQGQEPDSPEARAEYAAYLTAHGDHDVMAWPPGRNQQCWCGSGHKY  180
            VAA+RVAPFAAWCAEQGQEPDSPEARAEYAAYLTAHGDHDVMAWPPGRNQQCWCGSGHKY
Sbjct  121  VAAMRVAPFAAWCAEQGQEPDSPEARAEYAAYLTAHGDHDVMAWPPGRNQQCWCGSGHKY  180

Query  181  KKCCAAASFIDTEPAP  196
            KKCCAAASFIDTEPAP
Sbjct  181  KKCCAAASFIDTEPAP  196


>gi|121637849|ref|YP_978072.1| hypothetical protein BCG_1983c [Mycobacterium bovis BCG str. 
Pasteur 1173P2]
 gi|224990333|ref|YP_002645020.1| hypothetical protein JTY_1967 [Mycobacterium bovis BCG str. Tokyo 
172]
 gi|289574627|ref|ZP_06454854.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
 6 more sequence titles
 Length=196

 Score =  395 bits (1014),  Expect = 2e-108, Method: Compositional matrix adjust.
 Identities = 194/196 (99%), Positives = 195/196 (99%), Gaps = 0/196 (0%)

Query  1    MISDTEDFAHGDKAAPPRLRASYAACGGDAAGCWTMSDNGASRVPPVDETPAAESAEPIT  60
            MIS+ EDFAHGDKAAPPRLRASYAACGGDAAGCWTMSDNGASRVPPVDETPAAESAEPIT
Sbjct  1    MISEAEDFAHGDKAAPPRLRASYAACGGDAAGCWTMSDNGASRVPPVDETPAAESAEPIT  60

Query  61   AVSLAWLPAGDYERALDLWPDFAGSDLVTGPDGPVAHPLYCRRMQQKLVEFAEAGFPGLA  120
            AVSLAWLPAGDYERALDLWPDFAGSDLVTGPDGPVAHPLYCRRMQQKLVEFAEAGFPGLA
Sbjct  61   AVSLAWLPAGDYERALDLWPDFAGSDLVTGPDGPVAHPLYCRRMQQKLVEFAEAGFPGLA  120

Query  121  VAAIRVAPFAAWCAEQGQEPDSPEARAEYAAYLTAHGDHDVMAWPPGRNQQCWCGSGHKY  180
            VAAIRVAPFAAWCAEQGQEPDSPEARAEYAAYLTAHGDHDVMAWPPGRNQQCWCGSGHKY
Sbjct  121  VAAIRVAPFAAWCAEQGQEPDSPEARAEYAAYLTAHGDHDVMAWPPGRNQQCWCGSGHKY  180

Query  181  KKCCAAASFIDTEPAP  196
            KKCCAAASFIDTEPAP
Sbjct  181  KKCCAAASFIDTEPAP  196


>gi|289447560|ref|ZP_06437304.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
 gi|289420518|gb|EFD17719.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
Length=196

 Score =  394 bits (1013),  Expect = 3e-108, Method: Compositional matrix adjust.
 Identities = 195/196 (99%), Positives = 195/196 (99%), Gaps = 0/196 (0%)

Query  1    MISDTEDFAHGDKAAPPRLRASYAACGGDAAGCWTMSDNGASRVPPVDETPAAESAEPIT  60
            MISDTEDFAHGDKAAPPRLRASYAACGGDAAGCWTMSDNGASRVPPVDETPAAESAEPIT
Sbjct  1    MISDTEDFAHGDKAAPPRLRASYAACGGDAAGCWTMSDNGASRVPPVDETPAAESAEPIT  60

Query  61   AVSLAWLPAGDYERALDLWPDFAGSDLVTGPDGPVAHPLYCRRMQQKLVEFAEAGFPGLA  120
            AVSLAWLPAGDYERALDLWPDFAGSDLVTGPDGPVAHPL CRRMQQKLVEFAEAGFPGLA
Sbjct  61   AVSLAWLPAGDYERALDLWPDFAGSDLVTGPDGPVAHPLDCRRMQQKLVEFAEAGFPGLA  120

Query  121  VAAIRVAPFAAWCAEQGQEPDSPEARAEYAAYLTAHGDHDVMAWPPGRNQQCWCGSGHKY  180
            VAAIRVAPFAAWCAEQGQEPDSPEARAEYAAYLTAHGDHDVMAWPPGRNQQCWCGSGHKY
Sbjct  121  VAAIRVAPFAAWCAEQGQEPDSPEARAEYAAYLTAHGDHDVMAWPPGRNQQCWCGSGHKY  180

Query  181  KKCCAAASFIDTEPAP  196
            KKCCAAASFIDTEPAP
Sbjct  181  KKCCAAASFIDTEPAP  196


>gi|167970541|ref|ZP_02552818.1| hypothetical protein MtubH3_21908 [Mycobacterium tuberculosis 
H37Ra]
 gi|254550961|ref|ZP_05141408.1| hypothetical protein Mtube_10951 [Mycobacterium tuberculosis 
'98-R604 INH-RIF-EM']
 gi|308231988|ref|ZP_07414508.2| hypothetical protein TMAG_02125 [Mycobacterium tuberculosis SUMu001]
 26 more sequence titles
 Length=161

 Score =  328 bits (841),  Expect = 2e-88, Method: Compositional matrix adjust.
 Identities = 161/161 (100%), Positives = 161/161 (100%), Gaps = 0/161 (0%)

Query  36   MSDNGASRVPPVDETPAAESAEPITAVSLAWLPAGDYERALDLWPDFAGSDLVTGPDGPV  95
            MSDNGASRVPPVDETPAAESAEPITAVSLAWLPAGDYERALDLWPDFAGSDLVTGPDGPV
Sbjct  1    MSDNGASRVPPVDETPAAESAEPITAVSLAWLPAGDYERALDLWPDFAGSDLVTGPDGPV  60

Query  96   AHPLYCRRMQQKLVEFAEAGFPGLAVAAIRVAPFAAWCAEQGQEPDSPEARAEYAAYLTA  155
            AHPLYCRRMQQKLVEFAEAGFPGLAVAAIRVAPFAAWCAEQGQEPDSPEARAEYAAYLTA
Sbjct  61   AHPLYCRRMQQKLVEFAEAGFPGLAVAAIRVAPFAAWCAEQGQEPDSPEARAEYAAYLTA  120

Query  156  HGDHDVMAWPPGRNQQCWCGSGHKYKKCCAAASFIDTEPAP  196
            HGDHDVMAWPPGRNQQCWCGSGHKYKKCCAAASFIDTEPAP
Sbjct  121  HGDHDVMAWPPGRNQQCWCGSGHKYKKCCAAASFIDTEPAP  161


>gi|294996863|ref|ZP_06802554.1| hypothetical protein Mtub2_20753 [Mycobacterium tuberculosis 
210]
Length=117

 Score =  168 bits (425),  Expect = 4e-40, Method: Compositional matrix adjust.
 Identities = 82/82 (100%), Positives = 82/82 (100%), Gaps = 0/82 (0%)

Query  36   MSDNGASRVPPVDETPAAESAEPITAVSLAWLPAGDYERALDLWPDFAGSDLVTGPDGPV  95
            MSDNGASRVPPVDETPAAESAEPITAVSLAWLPAGDYERALDLWPDFAGSDLVTGPDGPV
Sbjct  1    MSDNGASRVPPVDETPAAESAEPITAVSLAWLPAGDYERALDLWPDFAGSDLVTGPDGPV  60

Query  96   AHPLYCRRMQQKLVEFAEAGFP  117
            AHPLYCRRMQQKLVEFAEAGFP
Sbjct  61   AHPLYCRRMQQKLVEFAEAGFP  82


>gi|328882686|emb|CCA55925.1| hypothetical protein SVEN_2639 [Streptomyces venezuelae ATCC 
10712]
Length=334

 Score = 63.2 bits (152),  Expect = 2e-08, Method: Compositional matrix adjust.
 Identities = 35/109 (33%), Positives = 53/109 (49%), Gaps = 6/109 (5%)

Query  79   WPDFAGSDLVTG-PDGPVAHPLY---CRRMQQKLVEFAEAGFPGLAVAAIRVAPFAAWCA  134
            WP+    +L+T  P+    +P Y      ++  L E ++AG P L +    V  + A+ A
Sbjct  221  WPERELDELLTAYPELEAEYPTYRAHLTDIEASLRELSQAGTPNLGIVRATVPSYEAFAA  280

Query  135  EQGQEPDSPEARAEYAAYLTAHGDHDVMAWPPGRNQQCWCGSGHKYKKC  183
             +  +P + +   +YA  L A G     AWPP R   CWCGSG  Y +C
Sbjct  281  SESTKPSNADLLPQYATTLAARGR--ATAWPPARGADCWCGSGRTYGEC  327


>gi|294629548|ref|ZP_06708108.1| SEC-C domain-containing protein [Streptomyces sp. e14]
 gi|292832881|gb|EFF91230.1| SEC-C domain-containing protein [Streptomyces sp. e14]
Length=348

 Score = 60.8 bits (146),  Expect = 1e-07, Method: Compositional matrix adjust.
 Identities = 30/92 (33%), Positives = 45/92 (49%), Gaps = 2/92 (2%)

Query  97   HPLYCRRMQQKLVEFAEAGFPGLAVAAIRVAPFAAWCAEQGQEPDSPEARAEYAAYLTAH  156
            H  +   ++  L E + +G P L +    V  + A+ A +   P  P    +YA  L A 
Sbjct  254  HETHLATIEASLRELSASGTPNLGIVTGTVPSYEAFAASEATSPSDPTLLPQYATTLAAR  313

Query  157  GDHDVMAWPPGRNQQCWCGSGHKYKKCCAAAS  188
            G    +AWPP R ++CWCGSG  Y +C   A+
Sbjct  314  GR--AVAWPPQRAEECWCGSGTAYGECHGTAT  343


>gi|302551686|ref|ZP_07304028.1| conserved hypothetical protein [Streptomyces viridochromogenes 
DSM 40736]
 gi|302469304|gb|EFL32397.1| conserved hypothetical protein [Streptomyces viridochromogenes 
DSM 40736]
Length=339

 Score = 58.2 bits (139),  Expect = 7e-07, Method: Compositional matrix adjust.
 Identities = 39/133 (30%), Positives = 58/133 (44%), Gaps = 11/133 (8%)

Query  56   AEPITAVSLAWLPAGDYERALDLWPDFAGSDLVTGPDGPVAHPLYCRRMQQKLVEFAEAG  115
            + P     L W PA +    L+ +P  A        + P +H  +   ++  L E A +G
Sbjct  217  SRPFPVAILHW-PATELTELLEAYPALAS-------EYP-SHETHLATIEAALRELASSG  267

Query  116  FPGLAVAAIRVAPFAAWCAEQGQEPDSPEARAEYAAYLTAHGDHDVMAWPPGRNQQCWCG  175
             P L +    V  + A+ A +   P  P    +YA  L A G    +AWPP +   CWCG
Sbjct  268  TPNLGIVTGTVPSYEAFAASELSSPSDPTLLPQYATTLAARGR--AVAWPPQQGSACWCG  325

Query  176  SGHKYKKCCAAAS  188
            SG  Y +C  A +
Sbjct  326  SGRPYGQCHGAVA  338


>gi|21221305|ref|NP_627084.1| hypothetical protein SCO2855 [Streptomyces coelicolor A3(2)]
 gi|6689188|emb|CAB65585.1| hypothetical protein SCE20.29 [Streptomyces coelicolor A3(2)]
Length=338

 Score = 57.8 bits (138),  Expect = 9e-07, Method: Compositional matrix adjust.
 Identities = 31/80 (39%), Positives = 40/80 (50%), Gaps = 2/80 (2%)

Query  104  MQQKLVEFAEAGFPGLAVAAIRVAPFAAWCAEQGQEPDSPEARAEYAAYLTAHGDHDVMA  163
            ++  L E A +G P L V    V  + A+ A +G  P  P    +YA  L A G    +A
Sbjct  258  IEAALRELASSGTPNLGVVPGTVPSYEAFAASEGASPADPVLLPQYATTLAARGL--AVA  315

Query  164  WPPGRNQQCWCGSGHKYKKC  183
            WPP R   CWCGSG  Y +C
Sbjct  316  WPPQRGADCWCGSGRAYGEC  335


>gi|289771405|ref|ZP_06530783.1| conserved hypothetical protein [Streptomyces lividans TK24]
 gi|289701604|gb|EFD69033.1| conserved hypothetical protein [Streptomyces lividans TK24]
Length=243

 Score = 57.4 bits (137),  Expect = 1e-06, Method: Compositional matrix adjust.
 Identities = 31/80 (39%), Positives = 40/80 (50%), Gaps = 2/80 (2%)

Query  104  MQQKLVEFAEAGFPGLAVAAIRVAPFAAWCAEQGQEPDSPEARAEYAAYLTAHGDHDVMA  163
            ++  L E A +G P L V    V  + A+ A +G  P  P    +YA  L A G    +A
Sbjct  163  IEAALRELASSGTPNLGVVPGTVPSYEAFAASEGASPADPVLLPQYATTLAARGL--AVA  220

Query  164  WPPGRNQQCWCGSGHKYKKC  183
            WPP R   CWCGSG  Y +C
Sbjct  221  WPPQRGADCWCGSGRAYGEC  240


>gi|344999905|ref|YP_004802759.1| SEC-C motif domain-containing protein [Streptomyces sp. SirexAA-E]
 gi|344315531|gb|AEN10219.1| SEC-C motif domain protein [Streptomyces sp. SirexAA-E]
Length=337

 Score = 55.5 bits (132),  Expect = 4e-06, Method: Compositional matrix adjust.
 Identities = 36/128 (29%), Positives = 55/128 (43%), Gaps = 11/128 (8%)

Query  56   AEPITAVSLAWLPAGDYERALDLWPDFAGSDLVTGPDGPVAHPLYCRRMQQKLVEFAEAG  115
            + P     L W P  +    LD++P+          +  V H  +  R++  L +   AG
Sbjct  215  SRPFPVAVLHW-PEKELAELLDVYPELR--------EEYVDHATHLSRLENSLRDLHAAG  265

Query  116  FPGLAVAAIRVAPFAAWCAEQGQEPDSPEARAEYAAYLTAHGDHDVMAWPPGRNQQCWCG  175
             P L +    V  + A+ A +   P  P    +YA  L A G    + WPP R+  CWCG
Sbjct  266  TPNLGIVTGTVPSYEAFAASEAASPSDPGLLPQYATTLAARGR--AVPWPPARSAACWCG  323

Query  176  SGHKYKKC  183
            +G  Y+ C
Sbjct  324  TGRPYRDC  331


>gi|290960101|ref|YP_003491283.1| hypothetical protein SCAB_57151 [Streptomyces scabiei 87.22]
 gi|260649627|emb|CBG72742.1| conserved hypothetical protein [Streptomyces scabiei 87.22]
Length=336

 Score = 55.5 bits (132),  Expect = 4e-06, Method: Compositional matrix adjust.
 Identities = 37/131 (29%), Positives = 56/131 (43%), Gaps = 11/131 (8%)

Query  56   AEPITAVSLAWLPAGDYERALDLWPDFAGSDLVTGPDGPVAHPLYCRRMQQKLVEFAEAG  115
            + P     L W PAG+    +  +P  A        + P +H  +   ++  L E + +G
Sbjct  217  SRPFPVAVLHW-PAGELAELIAAYPGLAA-------EYP-SHEEHLATIEASLRELSSSG  267

Query  116  FPGLAVAAIRVAPFAAWCAEQGQEPDSPEARAEYAAYLTAHGDHDVMAWPPGRNQQCWCG  175
             P L +    V  + A+ A +   P       +YA  L A G    ++WPP R   CWCG
Sbjct  268  TPNLGIVTGTVPSYEAFAASESSSPSDATLLPQYATTLAARGL--AVSWPPQRGAACWCG  325

Query  176  SGHKYKKCCAA  186
            SG  Y+ C  A
Sbjct  326  SGETYETCHGA  336


>gi|254389836|ref|ZP_05005060.1| conserved hypothetical protein [Streptomyces clavuligerus ATCC 
27064]
 gi|294812828|ref|ZP_06771471.1| Hypothetical protein SCLAV_1997 [Streptomyces clavuligerus ATCC 
27064]
 gi|326441221|ref|ZP_08215955.1| hypothetical protein SclaA2_09146 [Streptomyces clavuligerus 
ATCC 27064]
 gi|197703547|gb|EDY49359.1| conserved hypothetical protein [Streptomyces clavuligerus ATCC 
27064]
 gi|294325427|gb|EFG07070.1| Hypothetical protein SCLAV_1997 [Streptomyces clavuligerus ATCC 
27064]
Length=337

 Score = 54.7 bits (130),  Expect = 6e-06, Method: Compositional matrix adjust.
 Identities = 28/93 (31%), Positives = 42/93 (46%), Gaps = 2/93 (2%)

Query  97   HPLYCRRMQQKLVEFAEAGFPGLAVAAIRVAPFAAWCAEQGQEPDSPEARAEYAAYLTAH  156
            H  +   ++  L + A  G   L +    V  + A+ A +G  P   +   ++   L A 
Sbjct  247  HAAHLTDIEASLRDLASTGTANLGIVTAAVPSYEAFAASEGSSPADADLLPQFTTTLAAR  306

Query  157  GDHDVMAWPPGRNQQCWCGSGHKYKKCCAAASF  189
            G    +AWPP R   CWCGSG  Y++C   A F
Sbjct  307  GH--AVAWPPHRTAPCWCGSGTGYRECHGGADF  337


>gi|29831747|ref|NP_826381.1| hypothetical protein SAV_5204 [Streptomyces avermitilis MA-4680]
 gi|29608864|dbj|BAC72916.1| hypothetical protein [Streptomyces avermitilis MA-4680]
Length=337

 Score = 54.7 bits (130),  Expect = 8e-06, Method: Compositional matrix adjust.
 Identities = 29/91 (32%), Positives = 43/91 (48%), Gaps = 2/91 (2%)

Query  96   AHPLYCRRMQQKLVEFAEAGFPGLAVAAIRVAPFAAWCAEQGQEPDSPEARAEYAAYLTA  155
            +H  +   ++  L E + +G P L +    V  + A+ A +   P       +YA  L A
Sbjct  248  SHEQHLATIEASLRELSASGTPNLGIVTGTVPSYEAFAASEASSPADGSLLPQYATTLAA  307

Query  156  HGDHDVMAWPPGRNQQCWCGSGHKYKKCCAA  186
             G    +AWPP R  +CWCGSG  Y +C  A
Sbjct  308  RGL--AVAWPPQRTGECWCGSGRVYGECHGA  336


>gi|239988001|ref|ZP_04708665.1| hypothetical protein SrosN1_11893 [Streptomyces roseosporus NRRL 
11379]
Length=334

 Score = 54.3 bits (129),  Expect = 8e-06, Method: Compositional matrix adjust.
 Identities = 32/109 (30%), Positives = 46/109 (43%), Gaps = 6/109 (5%)

Query  79   WPDFAGSDLVTG----PDGPVAHPLYCRRMQQKLVEFAEAGFPGLAVAAIRVAPFAAWCA  134
            WP+    +L+T      +  V    +  R++  L +    G P L +    V  + A+ A
Sbjct  225  WPEQELRELLTTYPELTEEYVDRTTHLARLEASLRDLHATGTPNLGIVTGTVPSYEAFAA  284

Query  135  EQGQEPDSPEARAEYAAYLTAHGDHDVMAWPPGRNQQCWCGSGHKYKKC  183
             +   P  P    +YA  L A G    + WPP R   CWCGSG  Y  C
Sbjct  285  SESASPSDPGLLPQYATTLAARGR--AIPWPPSRTAACWCGSGEAYGGC  331


>gi|291444982|ref|ZP_06584372.1| conserved hypothetical protein [Streptomyces roseosporus NRRL 
15998]
 gi|291347929|gb|EFE74833.1| conserved hypothetical protein [Streptomyces roseosporus NRRL 
15998]
Length=337

 Score = 54.3 bits (129),  Expect = 9e-06, Method: Compositional matrix adjust.
 Identities = 32/109 (30%), Positives = 46/109 (43%), Gaps = 6/109 (5%)

Query  79   WPDFAGSDLVTG----PDGPVAHPLYCRRMQQKLVEFAEAGFPGLAVAAIRVAPFAAWCA  134
            WP+    +L+T      +  V    +  R++  L +    G P L +    V  + A+ A
Sbjct  228  WPEQELRELLTTYPELTEEYVDRTTHLARLEASLRDLHATGTPNLGIVTGTVPSYEAFAA  287

Query  135  EQGQEPDSPEARAEYAAYLTAHGDHDVMAWPPGRNQQCWCGSGHKYKKC  183
             +   P  P    +YA  L A G    + WPP R   CWCGSG  Y  C
Sbjct  288  SESASPSDPGLLPQYATTLAARGR--AIPWPPSRTAACWCGSGEAYGGC  334


>gi|297199954|ref|ZP_06917351.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
 gi|197710424|gb|EDY54458.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
Length=336

 Score = 53.1 bits (126),  Expect = 2e-05, Method: Compositional matrix adjust.
 Identities = 28/88 (32%), Positives = 41/88 (47%), Gaps = 2/88 (2%)

Query  96   AHPLYCRRMQQKLVEFAEAGFPGLAVAAIRVAPFAAWCAEQGQEPDSPEARAEYAAYLTA  155
            +H  +   ++  L E A +G   L + +  V  + A+ A +G  P       +YA  L A
Sbjct  248  SHEEHLATIEASLRELAASGTANLGIVSGTVPSYEAFAASEGMSPAETSLLPQYATTLAA  307

Query  156  HGDHDVMAWPPGRNQQCWCGSGHKYKKC  183
             G    + WPP R   CWCGSG  Y +C
Sbjct  308  RGR--AVEWPPQRGTACWCGSGRGYGEC  333


>gi|291453881|ref|ZP_06593271.1| conserved hypothetical protein [Streptomyces albus J1074]
 gi|291356830|gb|EFE83732.1| conserved hypothetical protein [Streptomyces albus J1074]
Length=337

 Score = 52.4 bits (124),  Expect = 4e-05, Method: Compositional matrix adjust.
 Identities = 28/91 (31%), Positives = 41/91 (46%), Gaps = 2/91 (2%)

Query  96   AHPLYCRRMQQKLVEFAEAGFPGLAVAAIRVAPFAAWCAEQGQEPDSPEARAEYAAYLTA  155
            +H  +   ++  L E A +G P L   +  +  + A+ A +   P  P     YA  L A
Sbjct  249  SHEAHLAAVESSLRELATSGTPHLGTVSATLPSYEAFAASESTTPTDPSLLPLYATTLAA  308

Query  156  HGDHDVMAWPPGRNQQCWCGSGHKYKKCCAA  186
             G     AWPP +   CWCGS  +Y +C  A
Sbjct  309  RGR--AKAWPPAKEGACWCGSDRRYGECHGA  337


>gi|320010615|gb|ADW05465.1| hypothetical protein Sfla_4053 [Streptomyces flavogriseus ATCC 
33331]
Length=335

 Score = 52.0 bits (123),  Expect = 5e-05, Method: Compositional matrix adjust.
 Identities = 34/112 (31%), Positives = 50/112 (45%), Gaps = 6/112 (5%)

Query  79   WPDFAGSDLVTG----PDGPVAHPLYCRRMQQKLVEFAEAGFPGLAVAAIRVAPFAAWCA  134
            WP     +L+T         V+H  +  R++  L +   AG P L +    V  + A+ A
Sbjct  225  WPQDELRELLTAYPELSQEYVSHEDHLARLEAALRDLHAAGTPNLGIVTGTVPSYEAFAA  284

Query  135  EQGQEPDSPEARAEYAAYLTAHGDHDVMAWPPGRNQQCWCGSGHKYKKCCAA  186
             +   P  P+   +YA  L A G    + WPP R+  CWCGS   Y+ C  A
Sbjct  285  SEAASPSDPDLLPQYATTLAARGR--AVPWPPARSAACWCGSERPYRSCHGA  334


>gi|297194181|ref|ZP_06911579.1| conserved hypothetical protein [Streptomyces pristinaespiralis 
ATCC 25486]
 gi|297152152|gb|EFH31557.1| conserved hypothetical protein [Streptomyces pristinaespiralis 
ATCC 25486]
Length=346

 Score = 52.0 bits (123),  Expect = 5e-05, Method: Compositional matrix adjust.
 Identities = 27/98 (28%), Positives = 43/98 (44%), Gaps = 2/98 (2%)

Query  97   HPLYCRRMQQKLVEFAEAGFPGLAVAAIRVAPFAAWCAEQGQEPDSPEARAEYAAYLTAH  156
            H  +   ++  L + +  G   L +    V  + A+ A +   P + +   +YA  L A 
Sbjct  249  HRAHLTDIEASLRDLSATGTENLGIVTATVPSYEAFAASEQSSPANADLLPQYATTLAAR  308

Query  157  GDHDVMAWPPGRNQQCWCGSGHKYKKCCAAASFIDTEP  194
            G    +AWPP ++  CWCGSG  Y +C   A      P
Sbjct  309  GR--AVAWPPSKSAACWCGSGRTYGECHGVAELSRASP  344


>gi|297561634|ref|YP_003680608.1| SEC-C motif domain-containing protein [Nocardiopsis dassonvillei 
subsp. dassonvillei DSM 43111]
 gi|296846082|gb|ADH68102.1| SEC-C motif domain protein [Nocardiopsis dassonvillei subsp. 
dassonvillei DSM 43111]
Length=337

 Score = 51.6 bits (122),  Expect = 6e-05, Method: Compositional matrix adjust.
 Identities = 18/28 (65%), Positives = 22/28 (79%), Gaps = 0/28 (0%)

Query  161  VMAWPPGRNQQCWCGSGHKYKKCCAAAS  188
            + +WPPGRN+ CWC SG KYKKCC + S
Sbjct  308  LRSWPPGRNEPCWCASGRKYKKCCGSPS  335


>gi|329937992|ref|ZP_08287474.1| hypothetical protein SGM_2966 [Streptomyces griseoaurantiacus 
M045]
 gi|329302949|gb|EGG46838.1| hypothetical protein SGM_2966 [Streptomyces griseoaurantiacus 
M045]
Length=348

 Score = 51.6 bits (122),  Expect = 6e-05, Method: Compositional matrix adjust.
 Identities = 28/88 (32%), Positives = 39/88 (45%), Gaps = 2/88 (2%)

Query  96   AHPLYCRRMQQKLVEFAEAGFPGLAVAAIRVAPFAAWCAEQGQEPDSPEARAEYAAYLTA  155
            +H  +    ++ L E A +G P L + A  V  + A+ A +   P  P    +YA  L A
Sbjct  258  SHEEHLATTERSLRELAASGTPNLGIVAGTVPSYEAFAASEASSPSDPALLPQYATTLAA  317

Query  156  HGDHDVMAWPPGRNQQCWCGSGHKYKKC  183
             G      WPP     CWCGS   Y+ C
Sbjct  318  RG--RARQWPPQHGTACWCGSDAPYETC  343


>gi|318057145|ref|ZP_07975868.1| hypothetical protein SSA3_04355 [Streptomyces sp. SA3_actG]
 gi|318080023|ref|ZP_07987355.1| hypothetical protein SSA3_25893 [Streptomyces sp. SA3_actF]
Length=356

 Score = 49.3 bits (116),  Expect = 3e-04, Method: Compositional matrix adjust.
 Identities = 32/112 (29%), Positives = 48/112 (43%), Gaps = 6/112 (5%)

Query  79   WPDFAGSDLVTG-PDGPVAHPLY---CRRMQQKLVEFAEAGFPGLAVAAIRVAPFAAWCA  134
            WP+   ++L+T  P     +P Y    R ++  L + A +G P L +    V  + A+ A
Sbjct  246  WPEPELTELLTSYPALATEYPSYEAHTRSIESALRDLAASGIPNLGIVRATVPSYEAFAA  305

Query  135  EQGQEPDSPEARAEYAAYLTAHGDHDVMAWPPGRNQQCWCGSGHKYKKCCAA  186
             +   P +P     Y   L          WPP    +CWCGSG  Y+ C  A
Sbjct  306  AESTAPTTPALLPLYTTTLATRAL--ATPWPPHPGAECWCGSGAGYEGCHGA  355


>gi|302521592|ref|ZP_07273934.1| conserved hypothetical protein [Streptomyces sp. SPB78]
 gi|302430487|gb|EFL02303.1| conserved hypothetical protein [Streptomyces sp. SPB78]
Length=354

 Score = 49.3 bits (116),  Expect = 3e-04, Method: Compositional matrix adjust.
 Identities = 32/112 (29%), Positives = 48/112 (43%), Gaps = 6/112 (5%)

Query  79   WPDFAGSDLVTG-PDGPVAHPLY---CRRMQQKLVEFAEAGFPGLAVAAIRVAPFAAWCA  134
            WP+   ++L+T  P     +P Y    R ++  L + A +G P L +    V  + A+ A
Sbjct  244  WPEPELTELLTSYPALATEYPSYEAHTRSIESALRDLAASGIPNLGIVRATVPSYEAFAA  303

Query  135  EQGQEPDSPEARAEYAAYLTAHGDHDVMAWPPGRNQQCWCGSGHKYKKCCAA  186
             +   P +P     Y   L          WPP    +CWCGSG  Y+ C  A
Sbjct  304  AESTAPTTPALLPLYTTTLATRAL--ATPWPPHPGAECWCGSGAGYEGCHGA  353


>gi|333024767|ref|ZP_08452831.1| hypothetical protein STTU_2271 [Streptomyces sp. Tu6071]
 gi|332744619|gb|EGJ75060.1| hypothetical protein STTU_2271 [Streptomyces sp. Tu6071]
Length=522

 Score = 48.5 bits (114),  Expect = 5e-04, Method: Compositional matrix adjust.
 Identities = 32/112 (29%), Positives = 48/112 (43%), Gaps = 6/112 (5%)

Query  79   WPDFAGSDLVTG-PDGPVAHPLY---CRRMQQKLVEFAEAGFPGLAVAAIRVAPFAAWCA  134
            WP+   ++L+T  P     +P Y    R ++  L + A +G P L +    V  + A+ A
Sbjct  412  WPEPELTELLTSYPALATEYPSYEAHTRSIESALRDLAASGIPNLGIVRATVPSYEAFAA  471

Query  135  EQGQEPDSPEARAEYAAYLTAHGDHDVMAWPPGRNQQCWCGSGHKYKKCCAA  186
             +   P +P     Y   L          WPP    +CWCGSG  Y+ C  A
Sbjct  472  AESTAPTTPALLPLYTTTLATRAL--ATPWPPHPGAECWCGSGTGYEGCHGA  521


>gi|302560467|ref|ZP_07312809.1| SEC-C domain-containing protein [Streptomyces griseoflavus Tu4000]
 gi|302478085|gb|EFL41178.1| SEC-C domain-containing protein [Streptomyces griseoflavus Tu4000]
Length=337

 Score = 46.6 bits (109),  Expect = 0.002, Method: Compositional matrix adjust.
 Identities = 34/112 (31%), Positives = 47/112 (42%), Gaps = 6/112 (5%)

Query  79   WPDFAGSDLVTG-PDGPVAHPLY---CRRMQQKLVEFAEAGFPGLAVAAIRVAPFAAWCA  134
            WP    ++L    PD    +P Y      ++  L E A +G   L +    V  + A+ A
Sbjct  227  WPADELAELTEAYPDLTREYPSYDAHLATIEAALRELASSGTANLGIVTGTVPSYEAFAA  286

Query  135  EQGQEPDSPEARAEYAAYLTAHGDHDVMAWPPGRNQQCWCGSGHKYKKCCAA  186
             +   P       +YA  L A G    +AWPP  +  CWCGSG  Y  C  A
Sbjct  287  SELSSPADATLLPQYATTLAARGR--AVAWPPEPSAACWCGSGRTYGDCHGA  336


>gi|332702748|ref|ZP_08422836.1| Protein translocase subunit secA [Desulfovibrio africanus str. 
Walvis Bay]
 gi|332552897|gb|EGJ49941.1| Protein translocase subunit secA [Desulfovibrio africanus str. 
Walvis Bay]
Length=838

 Score = 46.6 bits (109),  Expect = 0.002, Method: Composition-based stats.
 Identities = 25/55 (46%), Positives = 28/55 (51%), Gaps = 2/55 (3%)

Query  135  EQGQEPDSPEARAEYAAYLTAHGDHDVMAWPP--GRNQQCWCGSGHKYKKCCAAA  187
            E+ Q  + P+      A  TA G   V    P  GRN  C CGSG KYKKCC AA
Sbjct  783  EEFQHKEEPKNVQYSGAEKTAAGKQPVKREAPKVGRNDPCPCGSGKKYKKCCGAA  837


>gi|345038776|gb|EGW43161.1| translocase subunit secA [Bilophila sp. 4_1_30]
Length=852

 Score = 45.1 bits (105),  Expect = 0.005, Method: Composition-based stats.
 Identities = 32/94 (35%), Positives = 41/94 (44%), Gaps = 14/94 (14%)

Query  105  QQKLVEFAEAGFPGLAVAAIRVAPFAAWCAEQ---GQEPDSPEARAEYAAYLTAHGD-HD  160
            Q+ LV   E  F   A+  +RV       AE+     EP+      E    L+   +  D
Sbjct  758  QELLVHIREGAFR--ALTRVRVEQRPTEVAEEVVAAPEPEPMFQHKEQPQQLSYSNEPED  815

Query  161  VMAWP--------PGRNQQCWCGSGHKYKKCCAA  186
            ++  P        PGRN  C CGSG KYKKCC A
Sbjct  816  LLGAPAQAKAENKPGRNDPCPCGSGKKYKKCCGA  849


>gi|317487372|ref|ZP_07946162.1| preprotein translocase [Bilophila wadsworthia 3_1_6]
 gi|316921368|gb|EFV42664.1| preprotein translocase [Bilophila wadsworthia 3_1_6]
Length=852

 Score = 45.1 bits (105),  Expect = 0.005, Method: Composition-based stats.
 Identities = 32/94 (35%), Positives = 41/94 (44%), Gaps = 14/94 (14%)

Query  105  QQKLVEFAEAGFPGLAVAAIRVAPFAAWCAEQ---GQEPDSPEARAEYAAYLTAHGD-HD  160
            Q+ LV   E  F   A+  +RV       AE+     EP+      E    L+   +  D
Sbjct  758  QELLVHIREGAFR--ALTRVRVEQRPTEVAEEVVAAPEPEPMFQHKEQPQQLSYSNEPED  815

Query  161  VMAWP--------PGRNQQCWCGSGHKYKKCCAA  186
            ++  P        PGRN  C CGSG KYKKCC A
Sbjct  816  LLGAPAQAKAENKPGRNDPCPCGSGKKYKKCCGA  849


>gi|182438473|ref|YP_001826192.1| hypothetical protein SGR_4680 [Streptomyces griseus subsp. griseus 
NBRC 13350]
 gi|178466989|dbj|BAG21509.1| conserved hypothetical protein [Streptomyces griseus subsp. griseus 
NBRC 13350]
Length=334

 Score = 44.3 bits (103),  Expect = 0.009, Method: Compositional matrix adjust.
 Identities = 28/84 (34%), Positives = 40/84 (48%), Gaps = 2/84 (2%)

Query  100  YCRRMQQKLVEFAEAGFPGLAVAAIRVAPFAAWCAEQGQEPDSPEARAEYAAYLTAHGDH  159
            +  R++  L +   AG P L +    V  + A+ A +   P +P    +YA  L A G  
Sbjct  250  HLDRLEAALRDLHAAGTPNLGIVTGTVPSYEAFAASEAASPAAPGLLPQYATTLAARGR-  308

Query  160  DVMAWPPGRNQQCWCGSGHKYKKC  183
              + WPP R   CWCGSG  Y +C
Sbjct  309  -AIPWPPSRTAACWCGSGETYGRC  331


>gi|89895085|ref|YP_518572.1| hypothetical protein DSY2339 [Desulfitobacterium hafniense Y51]
 gi|89334533|dbj|BAE84128.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length=303

 Score = 44.3 bits (103),  Expect = 0.010, Method: Compositional matrix adjust.
 Identities = 17/27 (63%), Positives = 21/27 (78%), Gaps = 0/27 (0%)

Query  160  DVMAWPPGRNQQCWCGSGHKYKKCCAA  186
            D M+   GRN++CWCGSG KYKKC A+
Sbjct  11   DFMSDKLGRNEECWCGSGQKYKKCHAS  37


>gi|345361123|gb|EGW93284.1| SEC-C motif family protein [Escherichia coli STEC_EH250]
Length=695

 Score = 44.3 bits (103),  Expect = 0.010, Method: Composition-based stats.
 Identities = 15/19 (79%), Positives = 17/19 (90%), Gaps = 0/19 (0%)

Query  166  PGRNQQCWCGSGHKYKKCC  184
            PGRN+ C+CGSG KYKKCC
Sbjct  675  PGRNEPCFCGSGKKYKKCC  693


>gi|326779119|ref|ZP_08238384.1| SEC-C motif domain protein [Streptomyces cf. griseus XylebKG-1]
 gi|326659452|gb|EGE44298.1| SEC-C motif domain protein [Streptomyces griseus XylebKG-1]
Length=334

 Score = 44.3 bits (103),  Expect = 0.010, Method: Compositional matrix adjust.
 Identities = 28/84 (34%), Positives = 40/84 (48%), Gaps = 2/84 (2%)

Query  100  YCRRMQQKLVEFAEAGFPGLAVAAIRVAPFAAWCAEQGQEPDSPEARAEYAAYLTAHGDH  159
            +  R++  L +   AG P L +    V  + A+ A +   P +P    +YA  L A G  
Sbjct  250  HLDRLEAALRDLHAAGTPNLGIVTGTVPSYEAFAASEAASPAAPGLLPQYATTLAARGR-  308

Query  160  DVMAWPPGRNQQCWCGSGHKYKKC  183
              + WPP R   CWCGSG  Y +C
Sbjct  309  -AIPWPPSRTAACWCGSGETYGRC  331


>gi|161485608|ref|YP_387578.2| preprotein translocase subunit SecA [Desulfovibrio alaskensis 
G20]
 gi|166918872|sp|Q313L3.2|SECA_DESDG RecName: Full=Protein translocase subunit secA
 gi|342906371|gb|ABB37883.2| preprotein translocase, SecA subunit [Desulfovibrio alaskensis 
G20]
Length=864

 Score = 43.9 bits (102),  Expect = 0.011, Method: Composition-based stats.
 Identities = 35/96 (37%), Positives = 42/96 (44%), Gaps = 14/96 (14%)

Query  105  QQKLVEFAEAGFPGLAVAAIRVAPFAAWCAEQGQEPDSPEARA------EYAAYLT-AHG  157
            Q  L    E+ F  L    ++    AA  AEQ +     EA+A      E  A L+ + G
Sbjct  769  QNMLWSIKESVFRALTRLRLQRVEEAADPAEQPEAAGLQEAKATELRHKEQPAELSYSGG  828

Query  158  DHDVMAWPP-------GRNQQCWCGSGHKYKKCCAA  186
            D D    P        GRN  C CGSG KYKKCC A
Sbjct  829  DEDGAKTPSRRNAPKVGRNDPCPCGSGKKYKKCCGA  864


>gi|290961946|ref|YP_003493128.1| hypothetical protein SCAB_76191 [Streptomyces scabiei 87.22]
 gi|260651472|emb|CBG74594.1| conserved hypothetical protein [Streptomyces scabiei 87.22]
Length=314

 Score = 43.9 bits (102),  Expect = 0.012, Method: Compositional matrix adjust.
 Identities = 29/84 (35%), Positives = 40/84 (48%), Gaps = 11/84 (13%)

Query  74   RALDLWPDFAGSDLVTGPDGPVAHPLYCRRMQQKLVEFAEAGFPGLAVAAIRVAPFAAWC  133
            RA+  +  FA  D          HP Y R+++  L   AE G     VA      +AA+C
Sbjct  43   RAMRRYRSFAFDD----------HPTYLRQVEALLRTLAEQG-NHTTVALFDPEEYAAFC  91

Query  134  AEQGQEPDSPEARAEYAAYLTAHG  157
            A+ G EPD+P +R  + A L A G
Sbjct  92   ADTGLEPDTPSSRTRFTAELAATG  115


>gi|239908281|ref|YP_002955022.1| hypothetical protein DMR_36450 [Desulfovibrio magneticus RS-1]
 gi|239798147|dbj|BAH77136.1| hypothetical protein [Desulfovibrio magneticus RS-1]
Length=703

 Score = 42.7 bits (99),  Expect = 0.025, Method: Composition-based stats.
 Identities = 14/20 (70%), Positives = 18/20 (90%), Gaps = 0/20 (0%)

Query  166  PGRNQQCWCGSGHKYKKCCA  185
            PGRN++C+CGSG KYK+CC 
Sbjct  89   PGRNEKCFCGSGKKYKQCCG  108


>gi|114567166|ref|YP_754320.1| hypothetical protein Swol_1651 [Syntrophomonas wolfei subsp. 
wolfei str. Goettingen]
 gi|114338101|gb|ABI68949.1| hypothetical protein Swol_1651 [Syntrophomonas wolfei subsp. 
wolfei str. Goettingen]
Length=420

 Score = 42.7 bits (99),  Expect = 0.025, Method: Compositional matrix adjust.
 Identities = 17/24 (71%), Positives = 17/24 (71%), Gaps = 0/24 (0%)

Query  163  AWPPGRNQQCWCGSGHKYKKCCAA  186
            A  PGRN  C CGSG KYKKCC A
Sbjct  4    ALKPGRNDPCLCGSGKKYKKCCGA  27


>gi|289446169|ref|ZP_06435913.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
 gi|289419127|gb|EFD16328.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
Length=855

 Score = 42.7 bits (99),  Expect = 0.026, Method: Compositional matrix adjust.
 Identities = 23/54 (43%), Positives = 26/54 (49%), Gaps = 7/54 (12%)

Query  130  AAWCAEQGQEPDSPEARAEYAAYLTAHGDHDVMAWPPGRNQQCWCGSGHKYKKC  183
            +A     G EPD P  R        A    D+     GRN+ CWCGSG KYKKC
Sbjct  418  SALLRRAGTEPDHPLVR--LLERHRAQPRRDL-----GRNEACWCGSGRKYKKC  464


>gi|254480701|ref|ZP_05093948.1| SEC-C motif domain protein [marine gamma proteobacterium HTCC2148]
 gi|214039284|gb|EEB79944.1| SEC-C motif domain protein [marine gamma proteobacterium HTCC2148]
Length=113

 Score = 42.7 bits (99),  Expect = 0.026, Method: Compositional matrix adjust.
 Identities = 27/68 (40%), Positives = 32/68 (48%), Gaps = 9/68 (13%)

Query  125  RVAPFAAWCAEQ--------GQEPDSPEARAEYAAYLTAHGDHDVMAWPPGRNQQCWCGS  176
            R A  AA  AE          +E +  E  AE  A L    D   ++  P RN+ C CGS
Sbjct  46   RKAEVAALVAEHALFADIQINEEAEEQENIAELMA-LVNRTDTVSVSKTPNRNEPCSCGS  104

Query  177  GHKYKKCC  184
            G KYKKCC
Sbjct  105  GKKYKKCC  112


>gi|257792097|ref|YP_003182703.1| methionine aminopeptidase, type I [Eggerthella lenta DSM 2243]
 gi|317488717|ref|ZP_07947254.1| methionine aminopeptidase [Eggerthella sp. 1_3_56FAA]
 gi|257475994|gb|ACV56314.1| methionine aminopeptidase, type I [Eggerthella lenta DSM 2243]
 gi|316912184|gb|EFV33756.1| methionine aminopeptidase [Eggerthella sp. 1_3_56FAA]
Length=294

 Score = 42.7 bits (99),  Expect = 0.028, Method: Compositional matrix adjust.
 Identities = 16/21 (77%), Positives = 17/21 (81%), Gaps = 0/21 (0%)

Query  166  PGRNQQCWCGSGHKYKKCCAA  186
            PGRN +CWCGSG KYKKC  A
Sbjct  8    PGRNDECWCGSGKKYKKCHLA  28


>gi|340625636|ref|YP_004744088.1| hypothetical protein MCAN_06151 [Mycobacterium canettii CIPT 
140010059]
 gi|340003826|emb|CCC42955.1| hypothetical protein MCAN_06151 [Mycobacterium canettii CIPT 
140010059]
Length=855

 Score = 42.7 bits (99),  Expect = 0.031, Method: Compositional matrix adjust.
 Identities = 23/53 (44%), Positives = 25/53 (48%), Gaps = 7/53 (13%)

Query  131  AWCAEQGQEPDSPEARAEYAAYLTAHGDHDVMAWPPGRNQQCWCGSGHKYKKC  183
            A     G EPD P  R        A    D+     GRN+ CWCGSG KYKKC
Sbjct  419  ALLRRAGTEPDHPLVR--LLERHRAQPRRDL-----GRNEACWCGSGRKYKKC  464


>gi|289744327|ref|ZP_06503705.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
 gi|289756694|ref|ZP_06516072.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
 gi|294996128|ref|ZP_06801819.1| hypothetical protein Mtub2_16910 [Mycobacterium tuberculosis 
210]
 gi|289684855|gb|EFD52343.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
 gi|289712258|gb|EFD76270.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
 gi|326905164|gb|EGE52097.1| preprotein translocase subunit SecA [Mycobacterium tuberculosis 
W-148]
 gi|339293652|gb|AEJ45763.1| hypothetical protein CCDC5079_0573 [Mycobacterium tuberculosis 
CCDC5079]
 gi|339297293|gb|AEJ49403.1| hypothetical protein CCDC5180_0566 [Mycobacterium tuberculosis 
CCDC5180]
Length=855

 Score = 42.7 bits (99),  Expect = 0.031, Method: Compositional matrix adjust.
 Identities = 23/53 (44%), Positives = 25/53 (48%), Gaps = 7/53 (13%)

Query  131  AWCAEQGQEPDSPEARAEYAAYLTAHGDHDVMAWPPGRNQQCWCGSGHKYKKC  183
            A     G EPD P  R        A    D+     GRN+ CWCGSG KYKKC
Sbjct  419  ALLRRAGTEPDHPLVR--LLERHRAQPRRDL-----GRNEACWCGSGRKYKKC  464


>gi|148821815|ref|YP_001286569.1| hypothetical protein TBFG_10624 [Mycobacterium tuberculosis F11]
 gi|253797550|ref|YP_003030551.1| hypothetical protein TBMG_00621 [Mycobacterium tuberculosis KZN 
1435]
 gi|254549571|ref|ZP_05140018.1| hypothetical protein Mtube_03760 [Mycobacterium tuberculosis 
'98-R604 INH-RIF-EM']
 9 more sequence titles
 Length=855

 Score = 42.7 bits (99),  Expect = 0.031, Method: Compositional matrix adjust.
 Identities = 23/53 (44%), Positives = 25/53 (48%), Gaps = 7/53 (13%)

Query  131  AWCAEQGQEPDSPEARAEYAAYLTAHGDHDVMAWPPGRNQQCWCGSGHKYKKC  183
            A     G EPD P  R        A    D+     GRN+ CWCGSG KYKKC
Sbjct  419  ALLRRAGTEPDHPLVR--LLERHRAQPRRDL-----GRNEACWCGSGRKYKKC  464


>gi|15607753|ref|NP_215127.1| hypothetical protein Rv0613c [Mycobacterium tuberculosis H37Rv]
 gi|15840015|ref|NP_335052.1| hypothetical protein MT0643 [Mycobacterium tuberculosis CDC1551]
 gi|31791796|ref|NP_854289.1| hypothetical protein Mb0630c [Mycobacterium bovis AF2122/97]
 37 more sequence titles
 Length=855

 Score = 42.7 bits (99),  Expect = 0.031, Method: Compositional matrix adjust.
 Identities = 23/53 (44%), Positives = 25/53 (48%), Gaps = 7/53 (13%)

Query  131  AWCAEQGQEPDSPEARAEYAAYLTAHGDHDVMAWPPGRNQQCWCGSGHKYKKC  183
            A     G EPD P  R        A    D+     GRN+ CWCGSG KYKKC
Sbjct  419  ALLRRAGTEPDHPLVR--LLERHRAQPRRDL-----GRNEACWCGSGRKYKKC  464


>gi|325831651|ref|ZP_08164868.1| methionine aminopeptidase, type I [Eggerthella sp. HGA1]
 gi|325486522|gb|EGC88971.1| methionine aminopeptidase, type I [Eggerthella sp. HGA1]
Length=294

 Score = 42.4 bits (98),  Expect = 0.033, Method: Compositional matrix adjust.
 Identities = 16/21 (77%), Positives = 17/21 (81%), Gaps = 0/21 (0%)

Query  166  PGRNQQCWCGSGHKYKKCCAA  186
            PGRN +CWCGSG KYKKC  A
Sbjct  8    PGRNDECWCGSGKKYKKCHLA  28


>gi|21674062|ref|NP_662127.1| preprotein translocase subunit SecA [Chlorobium tepidum TLS]
 gi|81860066|sp|Q8KD18.1|SECA_CHLTE RecName: Full=Protein translocase subunit secA
 gi|21647214|gb|AAM72469.1| preprotein translocase SecA subunit [Chlorobium tepidum TLS]
Length=1031

 Score = 42.4 bits (98),  Expect = 0.033, Method: Composition-based stats.
 Identities = 21/42 (50%), Positives = 22/42 (53%), Gaps = 6/42 (14%)

Query  151   AYLTAHGDHDVMAWP------PGRNQQCWCGSGHKYKKCCAA  186
             A L   GD  V+  P      PGRN  C CGSG KYK CC A
Sbjct  988   ATLWMPGDEIVVQQPVRTEKKPGRNDDCPCGSGKKYKNCCGA  1029


>gi|219669498|ref|YP_002459933.1| methionine aminopeptidase, type I [Desulfitobacterium hafniense 
DCB-2]
 gi|219539758|gb|ACL21497.1| methionine aminopeptidase, type I [Desulfitobacterium hafniense 
DCB-2]
Length=291

 Score = 42.4 bits (98),  Expect = 0.036, Method: Compositional matrix adjust.
 Identities = 16/25 (64%), Positives = 20/25 (80%), Gaps = 0/25 (0%)

Query  162  MAWPPGRNQQCWCGSGHKYKKCCAA  186
            M+   GRN++CWCGSG KYKKC A+
Sbjct  1    MSDKLGRNEECWCGSGQKYKKCHAS  25


>gi|338999764|ref|ZP_08638401.1| hypothetical protein GME_16957 [Halomonas sp. TD01]
 gi|338763385|gb|EGP18380.1| hypothetical protein GME_16957 [Halomonas sp. TD01]
Length=606

 Score = 42.4 bits (98),  Expect = 0.038, Method: Compositional matrix adjust.
 Identities = 14/24 (59%), Positives = 17/24 (71%), Gaps = 0/24 (0%)

Query  166  PGRNQQCWCGSGHKYKKCCAAASF  189
            PGRN+ CWC SG K+K+CC    F
Sbjct  74   PGRNEPCWCDSGRKFKQCCYRVDF  97


>gi|339444461|ref|YP_004710465.1| methionine aminopeptidase [Eggerthella sp. YY7918]
 gi|338904213|dbj|BAK44064.1| methionine aminopeptidase [Eggerthella sp. YY7918]
Length=294

 Score = 42.4 bits (98),  Expect = 0.039, Method: Compositional matrix adjust.
 Identities = 15/18 (84%), Positives = 16/18 (89%), Gaps = 0/18 (0%)

Query  166  PGRNQQCWCGSGHKYKKC  183
            PGRN +CWCGSG KYKKC
Sbjct  8    PGRNDECWCGSGRKYKKC  25



Lambda     K      H
   0.318    0.133    0.443 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 205411802368


  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
    Posted date:  Sep 5, 2011  4:36 AM
  Number of letters in database: 5,219,829,388
  Number of sequences in database:  15,229,318



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40