BLASTP 2.2.25+


Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           15,229,318 sequences; 5,219,829,388 total letters



Query= Rv1949c

Length=319
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|15609086|ref|NP_216465.1|  hypothetical protein Rv1949c [Mycob...   646    0.0   
gi|289762103|ref|ZP_06521481.1|  conserved hypothetical protein [...   642    0.0   
gi|289570036|ref|ZP_06450263.1|  conserved hypothetical protein [...   640    0.0   
gi|340626959|ref|YP_004745411.1|  hypothetical protein MCAN_19661...   633    1e-179
gi|15841420|ref|NP_336457.1|  hypothetical protein MT1999 [Mycoba...   607    7e-172
gi|31793141|ref|NP_855634.1|  hypothetical protein Mb1984c [Mycob...   605    3e-171
gi|183980511|ref|YP_001848802.1|  hypothetical protein MMAR_0482 ...   220    2e-55 
gi|118616854|ref|YP_905186.1|  hypothetical protein MUL_1133 [Myc...   214    1e-53 
gi|308374447|ref|ZP_07667786.1|  hypothetical protein TMFG_03452 ...   207    2e-51 
gi|118464810|ref|YP_882824.1|  hypothetical protein MAV_3647 [Myc...   147    2e-33 
gi|183984032|ref|YP_001852323.1|  hypothetical protein MMAR_4061 ...   144    2e-32 
gi|240172763|ref|ZP_04751422.1|  hypothetical protein MkanA1_2583...   135    6e-30 
gi|342858515|ref|ZP_08715170.1|  hypothetical protein MCOL_06556 ...   128    9e-28 
gi|336460919|gb|EGO39802.1|  hypothetical protein MAPs_35850 [Myc...   125    9e-27 
gi|41408570|ref|NP_961406.1|  hypothetical protein MAP2472 [Mycob...   125    9e-27 
gi|183980150|ref|YP_001848441.1|  hypothetical protein MMAR_0116 ...   120    2e-25 
gi|15609214|ref|NP_216593.1|  transmembrane protein [Mycobacteriu...   118    1e-24 
gi|342860790|ref|ZP_08717440.1|  hypothetical protein MCOL_18003 ...   111    2e-22 
gi|118466269|ref|YP_881458.1|  hypothetical protein MAV_2254 [Myc...   110    3e-22 
gi|118464060|ref|YP_880692.1|  hypothetical protein MAV_1450 [Myc...   109    7e-22 
gi|254774328|ref|ZP_05215844.1|  hypothetical protein MaviaA2_066...   107    2e-21 
gi|118464941|ref|YP_880720.1|  hypothetical protein MAV_1479 [Myc...   104    2e-20 
gi|183980513|ref|YP_001848804.1|  hypothetical protein MMAR_0484 ...   103    3e-20 
gi|118616857|ref|YP_905189.1|  hypothetical protein MUL_1136 [Myc...   100    3e-19 
gi|118466271|ref|YP_880360.1|  hypothetical protein MAV_1108 [Myc...  99.8    5e-19 
gi|118465678|ref|YP_879971.1|  hypothetical protein MAV_0692 [Myc...  99.4    7e-19 
gi|336457784|gb|EGO36778.1|  hypothetical protein MAPs_18830 [Myc...  95.1    1e-17 
gi|41407431|ref|NP_960267.1|  hypothetical protein MAP1333 [Mycob...  95.1    1e-17 
gi|342860951|ref|ZP_08717600.1|  hypothetical protein MCOL_18807 ...  94.4    2e-17 
gi|183983552|ref|YP_001851843.1|  hypothetical protein MMAR_3572 ...  93.6    4e-17 
gi|254775594|ref|ZP_05217110.1|  hypothetical protein MaviaA2_131...  92.4    9e-17 
gi|118464597|ref|YP_882327.1|  hypothetical protein MAV_3143 [Myc...  91.7    2e-16 
gi|240170349|ref|ZP_04749008.1|  hypothetical protein MkanA1_1363...  91.3    2e-16 
gi|118469187|ref|YP_889834.1|  hypothetical protein MSMEG_5600 [M...  90.9    2e-16 
gi|296170642|ref|ZP_06852217.1|  conserved hypothetical protein [...  87.8    2e-15 
gi|41407315|ref|NP_960151.1|  hypothetical protein MAP1217c [Myco...  87.8    2e-15 
gi|118464287|ref|YP_882469.1|  hypothetical protein MAV_3287 [Myc...  86.7    4e-15 
gi|296164510|ref|ZP_06847081.1|  conserved hypothetical protein [...  81.3    2e-13 
gi|340627558|ref|YP_004746010.1|  hypothetical protein MCAN_25831...  62.0    1e-07 
gi|254551592|ref|ZP_05142039.1|  hypothetical protein Mtube_14227...  59.7    5e-07 
gi|31793724|ref|NP_856217.1|  hypothetical protein Mb2571 [Mycoba...  59.7    5e-07 
gi|15609679|ref|NP_217058.1|  hypothetical protein Rv2542 [Mycoba...  59.7    6e-07 
gi|307085228|ref|ZP_07494341.1|  hypothetical protein TMLG_02269 ...  59.7    6e-07 
gi|15607754|ref|NP_215128.1|  hypothetical protein Rv0614 [Mycoba...  54.3    2e-05 
gi|289568550|ref|ZP_06448777.1|  conserved hypothetical protein [...  54.3    2e-05 
gi|15840016|ref|NP_335053.1|  hypothetical protein MT0644 [Mycoba...  54.3    3e-05 
gi|340625637|ref|YP_004744089.1|  hypothetical protein MCAN_06161...  54.3    3e-05 
gi|289749113|ref|ZP_06508491.1|  conserved hypothetical protein [...  53.9    4e-05 
gi|326905163|gb|EGE52096.1|  hypothetical protein TBPG_03095 [Myc...  53.1    6e-05 
gi|148821816|ref|YP_001286570.1|  hypothetical protein TBFG_10625...  52.8    8e-05 


>gi|15609086|ref|NP_216465.1| hypothetical protein Rv1949c [Mycobacterium tuberculosis H37Rv]
 gi|1806213|emb|CAB06512.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium tuberculosis H37Rv]
 gi|326903555|gb|EGE50488.1| LOW QUALITY PROTEIN: hypothetical protein TBPG_01431 [Mycobacterium 
tuberculosis W-148]
Length=319

 Score =  646 bits (1666),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 319/319 (100%), Positives = 319/319 (100%), Gaps = 0/319 (0%)

Query  1    WLRQRTGADLQIVSGIAEHLRQASGLAREGAGTIGAAQRRVIYAVQDAHNAGFNVEEDLS  60
            WLRQRTGADLQIVSGIAEHLRQASGLAREGAGTIGAAQRRVIYAVQDAHNAGFNVEEDLS
Sbjct  1    WLRQRTGADLQIVSGIAEHLRQASGLAREGAGTIGAAQRRVIYAVQDAHNAGFNVEEDLS  60

Query  61   VTDTRTSRTFAEQAARQAQAQALAGDIRQRATQLIGVEHEVAAKIATATAPLNTVGFHEP  120
            VTDTRTSRTFAEQAARQAQAQALAGDIRQRATQLIGVEHEVAAKIATATAPLNTVGFHEP
Sbjct  61   VTDTRTSRTFAEQAARQAQAQALAGDIRQRATQLIGVEHEVAAKIATATAPLNTVGFHEP  120

Query  121  PIAPSLPTPVPHNEKPQIHAVDRSWKQDPPSPMPGDPKDMTAVQARAAWDAVNADIARYN  180
            PIAPSLPTPVPHNEKPQIHAVDRSWKQDPPSPMPGDPKDMTAVQARAAWDAVNADIARYN
Sbjct  121  PIAPSLPTPVPHNEKPQIHAVDRSWKQDPPSPMPGDPKDMTAVQARAAWDAVNADIARYN  180

Query  181  ARCGRTFVLPNEQAAYDACIADKGSLFERQAAIRARLGELGVPVEGEPPPAPDPAGPQPN  240
            ARCGRTFVLPNEQAAYDACIADKGSLFERQAAIRARLGELGVPVEGEPPPAPDPAGPQPN
Sbjct  181  ARCGRTFVLPNEQAAYDACIADKGSLFERQAAIRARLGELGVPVEGEPPPAPDPAGPQPN  240

Query  241  EGLPPPGVSPPAESNLTVGPPSRPIQQARGGESLWDENGGEWRYFPGDNYRYPHWDYNPH  300
            EGLPPPGVSPPAESNLTVGPPSRPIQQARGGESLWDENGGEWRYFPGDNYRYPHWDYNPH
Sbjct  241  EGLPPPGVSPPAESNLTVGPPSRPIQQARGGESLWDENGGEWRYFPGDNYRYPHWDYNPH  300

Query  301  DSPTARWQNIPIGDLPTHK  319
            DSPTARWQNIPIGDLPTHK
Sbjct  301  DSPTARWQNIPIGDLPTHK  319


>gi|289762103|ref|ZP_06521481.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 
1503]
 gi|289709609|gb|EFD73625.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 
1503]
Length=318

 Score =  642 bits (1657),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 317/318 (99%), Positives = 318/318 (100%), Gaps = 0/318 (0%)

Query  2    LRQRTGADLQIVSGIAEHLRQASGLAREGAGTIGAAQRRVIYAVQDAHNAGFNVEEDLSV  61
            +RQRTGADLQIVSGIAEHLRQASGLAREGAGTIGAAQRRVIYAVQDAHNAGFNVEEDLSV
Sbjct  1    MRQRTGADLQIVSGIAEHLRQASGLAREGAGTIGAAQRRVIYAVQDAHNAGFNVEEDLSV  60

Query  62   TDTRTSRTFAEQAARQAQAQALAGDIRQRATQLIGVEHEVAAKIATATAPLNTVGFHEPP  121
            TDTRTSRTFAEQAARQAQAQALAGDIRQRATQLIGVEHEVAAKIATATAPLNTVGFHEPP
Sbjct  61   TDTRTSRTFAEQAARQAQAQALAGDIRQRATQLIGVEHEVAAKIATATAPLNTVGFHEPP  120

Query  122  IAPSLPTPVPHNEKPQIHAVDRSWKQDPPSPMPGDPKDMTAVQARAAWDAVNADIARYNA  181
            IAPSLPTPVPHNEKPQIHAVDRSWKQDPPSPMPGDPKDMTAVQARAAWDAVNADIARYNA
Sbjct  121  IAPSLPTPVPHNEKPQIHAVDRSWKQDPPSPMPGDPKDMTAVQARAAWDAVNADIARYNA  180

Query  182  RCGRTFVLPNEQAAYDACIADKGSLFERQAAIRARLGELGVPVEGEPPPAPDPAGPQPNE  241
            RCGRTFVLPNEQAAYDACIADKGSLFERQAAIRARLGELGVPVEGEPPPAPDPAGPQPNE
Sbjct  181  RCGRTFVLPNEQAAYDACIADKGSLFERQAAIRARLGELGVPVEGEPPPAPDPAGPQPNE  240

Query  242  GLPPPGVSPPAESNLTVGPPSRPIQQARGGESLWDENGGEWRYFPGDNYRYPHWDYNPHD  301
            GLPPPGVSPPAESNLTVGPPSRPIQQARGGESLWDENGGEWRYFPGDNYRYPHWDYNPHD
Sbjct  241  GLPPPGVSPPAESNLTVGPPSRPIQQARGGESLWDENGGEWRYFPGDNYRYPHWDYNPHD  300

Query  302  SPTARWQNIPIGDLPTHK  319
            SPTARWQNIPIGDLPTHK
Sbjct  301  SPTARWQNIPIGDLPTHK  318


>gi|289570036|ref|ZP_06450263.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
 gi|289543790|gb|EFD47438.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
Length=318

 Score =  640 bits (1651),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 316/318 (99%), Positives = 317/318 (99%), Gaps = 0/318 (0%)

Query  2    LRQRTGADLQIVSGIAEHLRQASGLAREGAGTIGAAQRRVIYAVQDAHNAGFNVEEDLSV  61
            +RQRTGADLQIVSGIAEHLRQASGLAREGAGTIGAAQRRVIYAVQDAHNAGFNVEEDLSV
Sbjct  1    MRQRTGADLQIVSGIAEHLRQASGLAREGAGTIGAAQRRVIYAVQDAHNAGFNVEEDLSV  60

Query  62   TDTRTSRTFAEQAARQAQAQALAGDIRQRATQLIGVEHEVAAKIATATAPLNTVGFHEPP  121
            TDTRTSRTFAEQAARQAQAQALAGDIRQRATQLIGVEHEVAAKIATATAPLNTVGFHEPP
Sbjct  61   TDTRTSRTFAEQAARQAQAQALAGDIRQRATQLIGVEHEVAAKIATATAPLNTVGFHEPP  120

Query  122  IAPSLPTPVPHNEKPQIHAVDRSWKQDPPSPMPGDPKDMTAVQARAAWDAVNADIARYNA  181
            IAPSLPTPVPHNEKPQIHAVDRSWKQDPPSPMPGDPKDMTAVQARAAWDAVNADIARYNA
Sbjct  121  IAPSLPTPVPHNEKPQIHAVDRSWKQDPPSPMPGDPKDMTAVQARAAWDAVNADIARYNA  180

Query  182  RCGRTFVLPNEQAAYDACIADKGSLFERQAAIRARLGELGVPVEGEPPPAPDPAGPQPNE  241
            RCGRTFVLPNEQAAYDACIADKGSL ERQAAIRARLGELGVPVEGEPPPAPDPAGPQPNE
Sbjct  181  RCGRTFVLPNEQAAYDACIADKGSLLERQAAIRARLGELGVPVEGEPPPAPDPAGPQPNE  240

Query  242  GLPPPGVSPPAESNLTVGPPSRPIQQARGGESLWDENGGEWRYFPGDNYRYPHWDYNPHD  301
            GLPPPGVSPPAESNLTVGPPSRPIQQARGGESLWDENGGEWRYFPGDNYRYPHWDYNPHD
Sbjct  241  GLPPPGVSPPAESNLTVGPPSRPIQQARGGESLWDENGGEWRYFPGDNYRYPHWDYNPHD  300

Query  302  SPTARWQNIPIGDLPTHK  319
            SPTARWQNIPIGDLPTHK
Sbjct  301  SPTARWQNIPIGDLPTHK  318


>gi|340626959|ref|YP_004745411.1| hypothetical protein MCAN_19661 [Mycobacterium canettii CIPT 
140010059]
 gi|340005149|emb|CCC44298.1| putative uncharacterized protein flags: fragment [Mycobacterium 
canettii CIPT 140010059]
Length=371

 Score =  633 bits (1632),  Expect = 1e-179, Method: Compositional matrix adjust.
 Identities = 314/318 (99%), Positives = 314/318 (99%), Gaps = 0/318 (0%)

Query  2    LRQRTGADLQIVSGIAEHLRQASGLAREGAGTIGAAQRRVIYAVQDAHNAGFNVEEDLSV  61
            LRQRTGADLQIVSGIAEHLRQASGLAREGAGTIGAAQRRVIYAVQDAHNAGFNVEEDLSV
Sbjct  54   LRQRTGADLQIVSGIAEHLRQASGLAREGAGTIGAAQRRVIYAVQDAHNAGFNVEEDLSV  113

Query  62   TDTRTSRTFAEQAARQAQAQALAGDIRQRATQLIGVEHEVAAKIATATAPLNTVGFHEPP  121
            TDTRTSRT AEQAARQAQAQALAGDIRQRATQLIGVEHEVAAKIATATAPLNTVGFHEPP
Sbjct  114  TDTRTSRTAAEQAARQAQAQALAGDIRQRATQLIGVEHEVAAKIATATAPLNTVGFHEPP  173

Query  122  IAPSLPTPVPHNEKPQIHAVDRSWKQDPPSPMPGDPKDMTAVQARAAWDAVNADIARYNA  181
            IAPSLPTPVPHNEKPQIHAVDRSWKQDPPSPMPGDPKDMTA QARAAWDAVNADIARYNA
Sbjct  174  IAPSLPTPVPHNEKPQIHAVDRSWKQDPPSPMPGDPKDMTAAQARAAWDAVNADIARYNA  233

Query  182  RCGRTFVLPNEQAAYDACIADKGSLFERQAAIRARLGELGVPVEGEPPPAPDPAGPQPNE  241
            RCGRTFVLPNEQAAYDACIADKGSL ERQAAIRARLGELGVPVEGEPPPAPDPAGPQPNE
Sbjct  234  RCGRTFVLPNEQAAYDACIADKGSLLERQAAIRARLGELGVPVEGEPPPAPDPAGPQPNE  293

Query  242  GLPPPGVSPPAESNLTVGPPSRPIQQARGGESLWDENGGEWRYFPGDNYRYPHWDYNPHD  301
            GLPPPGVSPPAESNLTVGPPSRP QQARGGESLWDENGGEWRYFPGDNYRYPHWDYNPHD
Sbjct  294  GLPPPGVSPPAESNLTVGPPSRPSQQARGGESLWDENGGEWRYFPGDNYRYPHWDYNPHD  353

Query  302  SPTARWQNIPIGDLPTHK  319
            SPTARWQNIPIGDLPTHK
Sbjct  354  SPTARWQNIPIGDLPTHK  371


>gi|15841420|ref|NP_336457.1| hypothetical protein MT1999 [Mycobacterium tuberculosis CDC1551]
 gi|148661757|ref|YP_001283280.1| hypothetical protein MRA_1959 [Mycobacterium tuberculosis H37Ra]
 gi|148823161|ref|YP_001287915.1| hypothetical protein TBFG_11978 [Mycobacterium tuberculosis F11]
 48 more sequence titles
 
gi|167970535|ref|ZP_02552812.1| hypothetical protein MtubH3_21878 [Mycobacterium tuberculosis 
H37Ra]
 gi|253799004|ref|YP_003032005.1| hypothetical protein TBMG_02043 [Mycobacterium tuberculosis KZN 
1435]
 gi|254232120|ref|ZP_04925447.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
 gi|254364769|ref|ZP_04980815.1| conserved hypothetical protein [Mycobacterium tuberculosis str. 
Haarlem]
 gi|254550968|ref|ZP_05141415.1| hypothetical protein Mtube_10986 [Mycobacterium tuberculosis 
'98-R604 INH-RIF-EM']
 gi|289554275|ref|ZP_06443485.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
605]
 gi|289746113|ref|ZP_06505491.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
 gi|289758058|ref|ZP_06517436.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
 gi|294996870|ref|ZP_06802561.1| hypothetical protein Mtub2_20788 [Mycobacterium tuberculosis 
210]
 gi|297634517|ref|ZP_06952297.1| hypothetical protein MtubK4_10361 [Mycobacterium tuberculosis 
KZN 4207]
 gi|297731505|ref|ZP_06960623.1| hypothetical protein MtubKR_10466 [Mycobacterium tuberculosis 
KZN R506]
 gi|298525443|ref|ZP_07012852.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
 gi|306779962|ref|ZP_07418299.1| hypothetical protein TMBG_00484 [Mycobacterium tuberculosis SUMu002]
 gi|306784711|ref|ZP_07423033.1| hypothetical protein TMCG_00033 [Mycobacterium tuberculosis SUMu003]
 gi|306789068|ref|ZP_07427390.1| hypothetical protein TMDG_02770 [Mycobacterium tuberculosis SUMu004]
 gi|306793403|ref|ZP_07431705.1| hypothetical protein TMEG_01843 [Mycobacterium tuberculosis SUMu005]
 gi|306803667|ref|ZP_07440335.1| hypothetical protein TMHG_01126 [Mycobacterium tuberculosis SUMu008]
 gi|306808241|ref|ZP_07444909.1| hypothetical protein TMGG_00493 [Mycobacterium tuberculosis SUMu007]
 gi|306968064|ref|ZP_07480725.1| hypothetical protein TMIG_00602 [Mycobacterium tuberculosis SUMu009]
 gi|306972289|ref|ZP_07484950.1| hypothetical protein TMJG_00197 [Mycobacterium tuberculosis SUMu010]
 gi|307080000|ref|ZP_07489170.1| hypothetical protein TMKG_00201 [Mycobacterium tuberculosis SUMu011]
 gi|307084574|ref|ZP_07493687.1| hypothetical protein TMLG_01227 [Mycobacterium tuberculosis SUMu012]
 gi|313658838|ref|ZP_07815718.1| hypothetical protein MtubKV_10476 [Mycobacterium tuberculosis 
KZN V2475]
 gi|13881658|gb|AAK46271.1| hypothetical protein MT1999 [Mycobacterium tuberculosis CDC1551]
 gi|124601179|gb|EAY60189.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
 gi|134150283|gb|EBA42328.1| conserved hypothetical protein [Mycobacterium tuberculosis str. 
Haarlem]
 gi|148505909|gb|ABQ73718.1| hypothetical protein MRA_1959 [Mycobacterium tuberculosis H37Ra]
 gi|148721688|gb|ABR06313.1| conserved hypothetical protein [Mycobacterium tuberculosis F11]
 gi|253320507|gb|ACT25110.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
1435]
 gi|289438907|gb|EFD21400.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
605]
 gi|289686641|gb|EFD54129.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
 gi|289713622|gb|EFD77634.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
 gi|298495237|gb|EFI30531.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
 gi|308327116|gb|EFP15967.1| hypothetical protein TMBG_00484 [Mycobacterium tuberculosis SUMu002]
 gi|308330552|gb|EFP19403.1| hypothetical protein TMCG_00033 [Mycobacterium tuberculosis SUMu003]
 gi|308334386|gb|EFP23237.1| hypothetical protein TMDG_02770 [Mycobacterium tuberculosis SUMu004]
 gi|308338182|gb|EFP27033.1| hypothetical protein TMEG_01843 [Mycobacterium tuberculosis SUMu005]
 gi|308345366|gb|EFP34217.1| hypothetical protein TMGG_00493 [Mycobacterium tuberculosis SUMu007]
 gi|308349669|gb|EFP38520.1| hypothetical protein TMHG_01126 [Mycobacterium tuberculosis SUMu008]
 gi|308354298|gb|EFP43149.1| hypothetical protein TMIG_00602 [Mycobacterium tuberculosis SUMu009]
 gi|308358240|gb|EFP47091.1| hypothetical protein TMJG_00197 [Mycobacterium tuberculosis SUMu010]
 gi|308362170|gb|EFP51021.1| hypothetical protein TMKG_00201 [Mycobacterium tuberculosis SUMu011]
 gi|308365826|gb|EFP54677.1| hypothetical protein TMLG_01227 [Mycobacterium tuberculosis SUMu012]
 gi|323719513|gb|EGB28639.1| hypothetical protein TMMG_01209 [Mycobacterium tuberculosis CDC1551A]
 gi|328458759|gb|AEB04182.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
4207]
 gi|339294881|gb|AEJ46992.1| hypothetical protein CCDC5079_1802 [Mycobacterium tuberculosis 
CCDC5079]
 gi|339298504|gb|AEJ50614.1| hypothetical protein CCDC5180_1777 [Mycobacterium tuberculosis 
CCDC5180]
 gi|344219771|gb|AEN00402.1| hypothetical protein MTCTRI2_1982 [Mycobacterium tuberculosis 
CTRI-2]
Length=300

 Score =  607 bits (1565),  Expect = 7e-172, Method: Compositional matrix adjust.
 Identities = 299/300 (99%), Positives = 300/300 (100%), Gaps = 0/300 (0%)

Query  20   LRQASGLAREGAGTIGAAQRRVIYAVQDAHNAGFNVEEDLSVTDTRTSRTFAEQAARQAQ  79
            +RQASGLAREGAGTIGAAQRRVIYAVQDAHNAGFNVEEDLSVTDTRTSRTFAEQAARQAQ
Sbjct  1    MRQASGLAREGAGTIGAAQRRVIYAVQDAHNAGFNVEEDLSVTDTRTSRTFAEQAARQAQ  60

Query  80   AQALAGDIRQRATQLIGVEHEVAAKIATATAPLNTVGFHEPPIAPSLPTPVPHNEKPQIH  139
            AQALAGDIRQRATQLIGVEHEVAAKIATATAPLNTVGFHEPPIAPSLPTPVPHNEKPQIH
Sbjct  61   AQALAGDIRQRATQLIGVEHEVAAKIATATAPLNTVGFHEPPIAPSLPTPVPHNEKPQIH  120

Query  140  AVDRSWKQDPPSPMPGDPKDMTAVQARAAWDAVNADIARYNARCGRTFVLPNEQAAYDAC  199
            AVDRSWKQDPPSPMPGDPKDMTAVQARAAWDAVNADIARYNARCGRTFVLPNEQAAYDAC
Sbjct  121  AVDRSWKQDPPSPMPGDPKDMTAVQARAAWDAVNADIARYNARCGRTFVLPNEQAAYDAC  180

Query  200  IADKGSLFERQAAIRARLGELGVPVEGEPPPAPDPAGPQPNEGLPPPGVSPPAESNLTVG  259
            IADKGSLFERQAAIRARLGELGVPVEGEPPPAPDPAGPQPNEGLPPPGVSPPAESNLTVG
Sbjct  181  IADKGSLFERQAAIRARLGELGVPVEGEPPPAPDPAGPQPNEGLPPPGVSPPAESNLTVG  240

Query  260  PPSRPIQQARGGESLWDENGGEWRYFPGDNYRYPHWDYNPHDSPTARWQNIPIGDLPTHK  319
            PPSRPIQQARGGESLWDENGGEWRYFPGDNYRYPHWDYNPHDSPTARWQNIPIGDLPTHK
Sbjct  241  PPSRPIQQARGGESLWDENGGEWRYFPGDNYRYPHWDYNPHDSPTARWQNIPIGDLPTHK  300


>gi|31793141|ref|NP_855634.1| hypothetical protein Mb1984c [Mycobacterium bovis AF2122/97]
 gi|121637854|ref|YP_978077.1| hypothetical protein BCG_1988c [Mycobacterium bovis BCG str. 
Pasteur 1173P2]
 gi|224990338|ref|YP_002645025.1| hypothetical protein JTY_1972 [Mycobacterium bovis BCG str. Tokyo 
172]
 16 more sequence titles
 
gi|289443430|ref|ZP_06433174.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
 gi|289447565|ref|ZP_06437309.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
 gi|289574632|ref|ZP_06454859.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
 gi|289750532|ref|ZP_06509910.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
 gi|289754045|ref|ZP_06513423.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
 gi|339632001|ref|YP_004723643.1| hypothetical protein MAF_19720 [Mycobacterium africanum GM041182]
 gi|31618732|emb|CAD94686.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium bovis AF2122/97]
 gi|121493501|emb|CAL71975.1| Conserved hypothetical protein [Mycobacterium bovis BCG str. 
Pasteur 1173P2]
 gi|224773451|dbj|BAH26257.1| hypothetical protein JTY_1972 [Mycobacterium bovis BCG str. Tokyo 
172]
 gi|289416349|gb|EFD13589.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
 gi|289420523|gb|EFD17724.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
 gi|289539063|gb|EFD43641.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
 gi|289691119|gb|EFD58548.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
 gi|289694632|gb|EFD62061.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
 gi|339331357|emb|CCC27042.1| conserved hypothetical protein [Mycobacterium africanum GM041182]
 gi|341601881|emb|CCC64555.1| conserved hypothetical protein [Mycobacterium bovis BCG str. 
Moreau RDJ]
Length=300

 Score =  605 bits (1560),  Expect = 3e-171, Method: Compositional matrix adjust.
 Identities = 298/300 (99%), Positives = 299/300 (99%), Gaps = 0/300 (0%)

Query  20   LRQASGLAREGAGTIGAAQRRVIYAVQDAHNAGFNVEEDLSVTDTRTSRTFAEQAARQAQ  79
            +RQASGLAREGAGTIGAAQRRVIYAVQDAHNAGFNVEEDLSVTDTRTSRTFAEQAARQAQ
Sbjct  1    MRQASGLAREGAGTIGAAQRRVIYAVQDAHNAGFNVEEDLSVTDTRTSRTFAEQAARQAQ  60

Query  80   AQALAGDIRQRATQLIGVEHEVAAKIATATAPLNTVGFHEPPIAPSLPTPVPHNEKPQIH  139
            AQALAGDIRQRATQLIGVEHEVAAKIATATAPLNTVGFHEPPIAPSLPTPVPHNEKPQIH
Sbjct  61   AQALAGDIRQRATQLIGVEHEVAAKIATATAPLNTVGFHEPPIAPSLPTPVPHNEKPQIH  120

Query  140  AVDRSWKQDPPSPMPGDPKDMTAVQARAAWDAVNADIARYNARCGRTFVLPNEQAAYDAC  199
            AVDRSWKQDPPSPMPGDPKDMTAVQARAAWDAVNADIARYNARCGRTFVLPNEQAAYDAC
Sbjct  121  AVDRSWKQDPPSPMPGDPKDMTAVQARAAWDAVNADIARYNARCGRTFVLPNEQAAYDAC  180

Query  200  IADKGSLFERQAAIRARLGELGVPVEGEPPPAPDPAGPQPNEGLPPPGVSPPAESNLTVG  259
            IADKGSL ERQAAIRARLGELGVPVEGEPPPAPDPAGPQPNEGLPPPGVSPPAESNLTVG
Sbjct  181  IADKGSLLERQAAIRARLGELGVPVEGEPPPAPDPAGPQPNEGLPPPGVSPPAESNLTVG  240

Query  260  PPSRPIQQARGGESLWDENGGEWRYFPGDNYRYPHWDYNPHDSPTARWQNIPIGDLPTHK  319
            PPSRPIQQARGGESLWDENGGEWRYFPGDNYRYPHWDYNPHDSPTARWQNIPIGDLPTHK
Sbjct  241  PPSRPIQQARGGESLWDENGGEWRYFPGDNYRYPHWDYNPHDSPTARWQNIPIGDLPTHK  300


>gi|183980511|ref|YP_001848802.1| hypothetical protein MMAR_0482 [Mycobacterium marinum M]
 gi|183173837|gb|ACC38947.1| conserved hypothetical protein [Mycobacterium marinum M]
Length=371

 Score =  220 bits (561),  Expect = 2e-55, Method: Compositional matrix adjust.
 Identities = 150/304 (50%), Positives = 187/304 (62%), Gaps = 32/304 (10%)

Query  2    LRQRTGADLQIVSGIAEHLRQASGLAREGAGTIGAAQRRVIYAVQDAHNAGFNVEEDLSV  61
            LR  T ADLQ  S   + L++A+ +AR GA  + AA+ RV YAV DA  AGF VEEDLSV
Sbjct  58   LRAATHADLQTTSAAVDQLQEAARVARNGASDLYAARSRVRYAVTDAQAAGFQVEEDLSV  117

Query  62   TDTRTSRTFAEQAARQAQAQALAGDIRQRATQLIGVEHEVAAKIATATAPLNTVGFHEPP  121
            TD  T  + A++AARQAQAQA AGD+RQRA QL+G++ +VA K+   TA +  +G   P 
Sbjct  118  TDRMTGGSAAQRAARQAQAQAFAGDLRQRAAQLVGLDAQVATKV---TAAVAGIGSSFPQ  174

Query  122  IAPSLPTPVPHNEKPQIHAVD-RSWKQDPPSPMPGDPKDMTAVQARAAWDAVNADIARYN  180
            I      P+ +     + AVD R++KQ+PP P P DPKDMTA +ARAAW  +N++I +YN
Sbjct  175  IPAPAAPPMGN----PVRAVDNRTFKQNPP-PAPVDPKDMTAEEARAAWADINSEIGKYN  229

Query  181  ARCGRTFVLPNEQAAYDACIADKGSLFERQAAIRARLGELGVPVEGEPPPAPDPA-----  235
            ARCGRTFVLP EQ AYDACIADKG L +RQAAIRARLG+LG+PVEGE P  P  A     
Sbjct  230  ARCGRTFVLPTEQGAYDACIADKGPLLDRQAAIRARLGQLGIPVEGEDPTHPGTAEPPFP  289

Query  236  -----------GPQPNEGLPPPGVSPPAESNLTVGPPSRPIQQARGGESLWDENGGEWRY  284
                       G Q  EG    GV+  A  +    P   P       + + D+ GG WRY
Sbjct  290  PPTRINGLTEHGAQRVEGRDGHGVNDNAMQDAVAHPIEPP-------QFMPDQYGGTWRY  342

Query  285  FPGD  288
               D
Sbjct  343  IGKD  346


>gi|118616854|ref|YP_905186.1| hypothetical protein MUL_1133 [Mycobacterium ulcerans Agy99]
 gi|118568964|gb|ABL03715.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99]
Length=314

 Score =  214 bits (546),  Expect = 1e-53, Method: Compositional matrix adjust.
 Identities = 147/304 (49%), Positives = 185/304 (61%), Gaps = 32/304 (10%)

Query  2    LRQRTGADLQIVSGIAEHLRQASGLAREGAGTIGAAQRRVIYAVQDAHNAGFNVEEDLSV  61
            +R  T ADLQ  S   + L++A+ +AR GA  + AA+ RV YAV DA  AGF VEEDLSV
Sbjct  1    MRAATHADLQTTSAAVDQLQEAARVARNGASDLYAARSRVRYAVTDAQAAGFQVEEDLSV  60

Query  62   TDTRTSRTFAEQAARQAQAQALAGDIRQRATQLIGVEHEVAAKIATATAPLNTVGFHEPP  121
            TD  T  + A++AARQAQAQA AGD+ QRA QL+G++ +VA K+   TA +  +G   P 
Sbjct  61   TDRMTGGSAAQRAARQAQAQAFAGDLPQRAAQLVGLDAQVATKV---TAAVAGIGSSFPQ  117

Query  122  IAPSLPTPVPHNEKPQIHAVD-RSWKQDPPSPMPGDPKDMTAVQARAAWDAVNADIARYN  180
            I      P+ +     + AVD R++KQ+PP P P DPKDMTA +ARAAW  +N++I +YN
Sbjct  118  IPAPAAPPMGN----PVRAVDNRTFKQNPP-PAPVDPKDMTAEEARAAWADINSEIGKYN  172

Query  181  ARCGRTFVLPNEQAAYDACIADKGSLFERQAAIRARLGELGVPVEGEPPPAPDPA-----  235
            ARCGRTFVLP EQ AYDACIADKG L +RQA IRARLG+LG+PVEGE P  P  A     
Sbjct  173  ARCGRTFVLPTEQGAYDACIADKGPLLDRQAVIRARLGQLGIPVEGEDPTHPGTAEPPFP  232

Query  236  -----------GPQPNEGLPPPGVSPPAESNLTVGPPSRPIQQARGGESLWDENGGEWRY  284
                       G Q  EG    GV+  A  +    P   P       + + D+ GG WRY
Sbjct  233  PPTRINGLTEHGAQRVEGRDGHGVNDNAMQDAVAHPIEPP-------QFMPDQYGGTWRY  285

Query  285  FPGD  288
               D
Sbjct  286  IGKD  289


>gi|308374447|ref|ZP_07667786.1| hypothetical protein TMFG_03452 [Mycobacterium tuberculosis SUMu006]
 gi|308341899|gb|EFP30750.1| hypothetical protein TMFG_03452 [Mycobacterium tuberculosis SUMu006]
Length=100

 Score =  207 bits (527),  Expect = 2e-51, Method: Compositional matrix adjust.
 Identities = 99/100 (99%), Positives = 100/100 (100%), Gaps = 0/100 (0%)

Query  220  LGVPVEGEPPPAPDPAGPQPNEGLPPPGVSPPAESNLTVGPPSRPIQQARGGESLWDENG  279
            +GVPVEGEPPPAPDPAGPQPNEGLPPPGVSPPAESNLTVGPPSRPIQQARGGESLWDENG
Sbjct  1    MGVPVEGEPPPAPDPAGPQPNEGLPPPGVSPPAESNLTVGPPSRPIQQARGGESLWDENG  60

Query  280  GEWRYFPGDNYRYPHWDYNPHDSPTARWQNIPIGDLPTHK  319
            GEWRYFPGDNYRYPHWDYNPHDSPTARWQNIPIGDLPTHK
Sbjct  61   GEWRYFPGDNYRYPHWDYNPHDSPTARWQNIPIGDLPTHK  100


>gi|118464810|ref|YP_882824.1| hypothetical protein MAV_3647 [Mycobacterium avium 104]
 gi|118166097|gb|ABK66994.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=235

 Score =  147 bits (372),  Expect = 2e-33, Method: Compositional matrix adjust.
 Identities = 78/115 (68%), Positives = 93/115 (81%), Gaps = 0/115 (0%)

Query  2    LRQRTGADLQIVSGIAEHLRQASGLAREGAGTIGAAQRRVIYAVQDAHNAGFNVEEDLSV  61
            LRQRTGADL +VSG A+ LR+A+G+AR GA  IGAAQRRV+YAV+DA NAGF V EDLSV
Sbjct  54   LRQRTGADLSVVSGKADQLRKAAGIARNGASDIGAAQRRVLYAVEDAQNAGFTVGEDLSV  113

Query  62   TDTRTSRTFAEQAARQAQAQALAGDIRQRATQLIGVEHEVAAKIATATAPLNTVG  116
            TDTR+S T A+ AARQA+A+A AGDIR RA QL GV+ +VA ++ T TA L TVG
Sbjct  114  TDTRSSTTPADHAARQARAEAFAGDIRARAEQLEGVDRKVARELTTTTADLGTVG  168


>gi|183984032|ref|YP_001852323.1| hypothetical protein MMAR_4061 [Mycobacterium marinum M]
 gi|183177358|gb|ACC42468.1| conserved hypothetical transmembrane protein [Mycobacterium marinum 
M]
Length=336

 Score =  144 bits (363),  Expect = 2e-32, Method: Compositional matrix adjust.
 Identities = 85/158 (54%), Positives = 104/158 (66%), Gaps = 4/158 (2%)

Query  2    LRQRTGADLQIVSGIAEHLRQASGLAREGAGTIGAAQRRVIYAVQDAHNAGFNVEEDLSV  61
            LR+RT ADL +VS  A+ LRQA+G+AR+GA  I AAQRRV+YA++DA N GF V EDLSV
Sbjct  54   LRERTSADLPLVSAKADVLRQAAGIARDGASGISAAQRRVLYAIEDAQNVGFTVGEDLSV  113

Query  62   TDTRTSRTFAEQAARQAQAQALAGDIRQRATQLIGVEHEVAAKIATATAPLNTVGFHEPP  121
            TDTR+S T AEQ AR AQAQA AGDIR RA QL   E +VA +++   A L+ +GF E P
Sbjct  114  TDTRSSGTAAEQVARHAQAQAFAGDIRLRAEQLDAAEVKVAGQLSAIRAGLSGIGFAENP  173

Query  122  IAPSLPTPVPHNEKPQIHAVDRSWKQDPPSPMPGDPKD  159
            I      PV H    +I      +KQD  +P P  P D
Sbjct  174  IF----NPVAHAPANRIGIQPVDFKQDSGAPPPFAPWD  207


>gi|240172763|ref|ZP_04751422.1| hypothetical protein MkanA1_25837 [Mycobacterium kansasii ATCC 
12478]
Length=354

 Score =  135 bits (341),  Expect = 6e-30, Method: Compositional matrix adjust.
 Identities = 93/144 (65%), Positives = 103/144 (72%), Gaps = 11/144 (7%)

Query  2    LRQRTGADLQIVSGIAEHLRQASGLAREGAGTIGAAQRRVIYAVQDAHNAGFNVEEDLSV  61
            LR RTG DL IV+  A+ LRQA+ +AREGAGTIGAAQRRVIYAVQDA++AGFNV EDLSV
Sbjct  54   LRARTGGDLVIVTAKADQLRQAAVIAREGAGTIGAAQRRVIYAVQDANDAGFNVGEDLSV  113

Query  62   TDTRTSRTFAEQAARQAQAQALAGDIRQRATQLIGVEHEVAAKIATATAPLNTVGFHEPP  121
             DTRTSRT AEQA+RQAQAQA A DIRQRATQLIG EHE  AK  TA        F E  
Sbjct  114  ADTRTSRTAAEQASRQAQAQAFAADIRQRATQLIGAEHEAGAK-ITAATAGIATTFPE--  170

Query  122  IAPSLPTPVPHNEKPQIHAVDRSW  145
                     PH+ KP + AVD +W
Sbjct  171  --------TPHDHKPHVQAVDHTW  186


>gi|342858515|ref|ZP_08715170.1| hypothetical protein MCOL_06556 [Mycobacterium colombiense CECT 
3035]
 gi|342134219|gb|EGT87399.1| hypothetical protein MCOL_06556 [Mycobacterium colombiense CECT 
3035]
Length=358

 Score =  128 bits (322),  Expect = 9e-28, Method: Compositional matrix adjust.
 Identities = 75/135 (56%), Positives = 94/135 (70%), Gaps = 2/135 (1%)

Query  2    LRQRTGADLQIVSGIAEHLRQASGLAREGAGTIGAAQRRVIYAVQDAHNAGFNVEEDLSV  61
            LRQRTGAD+ +VS  A+ LRQA+G+AR GA  I AAQRRV+Y V+DA NAGF V EDLSV
Sbjct  54   LRQRTGADVSVVSDKADLLRQAAGIARNGASDISAAQRRVLYGVEDAQNAGFAVGEDLSV  113

Query  62   TDTRTSRTFAEQAARQAQAQALAGDIRQRATQLIGVEHEVAAKIATATAPLNTVGFHEPP  121
            TDTR S + AE+AARQ QA+A A D+R RA QL G + +V+ ++  ATA L+  GF  P 
Sbjct  114  TDTR-STSPAERAARQTQAEAFAADLRLRAEQLEGADVKVSGQLTAATAGLSGGGF-APG  171

Query  122  IAPSLPTPVPHNEKP  136
               S  +P  H+  P
Sbjct  172  SGSSHGSPADHHTTP  186


>gi|336460919|gb|EGO39802.1| hypothetical protein MAPs_35850 [Mycobacterium avium subsp. paratuberculosis 
S397]
Length=362

 Score =  125 bits (314),  Expect = 9e-27, Method: Compositional matrix adjust.
 Identities = 70/116 (61%), Positives = 86/116 (75%), Gaps = 1/116 (0%)

Query  2    LRQRTGADLQIVSGIAEHLRQASGLAREGAGTIGAAQRRVIYAVQDAHNAGFNVEEDLSV  61
            LR+RT ADL +VS  A+ LRQA+G+AR GA  I AAQRRV++ V+DA NAGF V EDLSV
Sbjct  54   LRERTQADLSVVSAKADLLRQAAGIARNGASDISAAQRRVLFGVEDAQNAGFTVGEDLSV  113

Query  62   TDTRTSRTFAEQAARQAQAQALAGDIRQRATQLIGVEHEVAAKIATATAPLNTVGF  117
            TDTR S + AE+ ARQA+A+A A DIR RA QL G + +VAA++  ATA L   GF
Sbjct  114  TDTR-STSPAERPARQAEAEAFAADIRLRAEQLDGADTKVAAQLTAATAGLGGSGF  168


>gi|41408570|ref|NP_961406.1| hypothetical protein MAP2472 [Mycobacterium avium subsp. paratuberculosis 
K-10]
 gi|41396928|gb|AAS04789.1| hypothetical protein MAP_2472 [Mycobacterium avium subsp. paratuberculosis 
K-10]
Length=362

 Score =  125 bits (314),  Expect = 9e-27, Method: Compositional matrix adjust.
 Identities = 70/116 (61%), Positives = 86/116 (75%), Gaps = 1/116 (0%)

Query  2    LRQRTGADLQIVSGIAEHLRQASGLAREGAGTIGAAQRRVIYAVQDAHNAGFNVEEDLSV  61
            LR+RT ADL +VS  A+ LRQA+G+AR GA  I AAQRRV++ V+DA NAGF V EDLSV
Sbjct  54   LRERTQADLSVVSAKADLLRQAAGIARNGASDISAAQRRVLFGVEDAQNAGFTVGEDLSV  113

Query  62   TDTRTSRTFAEQAARQAQAQALAGDIRQRATQLIGVEHEVAAKIATATAPLNTVGF  117
            TDTR S + AE+ ARQA+A+A A DIR RA QL G + +VAA++  ATA L   GF
Sbjct  114  TDTR-STSPAERPARQAEAEAFAADIRLRAEQLDGADTKVAAQLTAATAGLGGSGF  168


>gi|183980150|ref|YP_001848441.1| hypothetical protein MMAR_0116 [Mycobacterium marinum M]
 gi|183173476|gb|ACC38586.1| conserved hypothetical membrane protein [Mycobacterium marinum 
M]
Length=339

 Score =  120 bits (302),  Expect = 2e-25, Method: Compositional matrix adjust.
 Identities = 90/158 (57%), Positives = 107/158 (68%), Gaps = 5/158 (3%)

Query  2    LRQRTGADLQIVSGIAEHLRQASGLAREGAGTIGAAQRRVIYAVQDAHNAGFNVEEDLSV  61
            LR+RT ADL IV   A+ LRQA+G+A  GA  I AAQRRV+YAV+DAHNAGF V EDLSV
Sbjct  54   LRERTSADLPIVGAKADMLRQAAGIAGNGASDISAAQRRVLYAVEDAHNAGFTVGEDLSV  113

Query  62   TDTRTSRTFAEQAARQAQAQALAGDIRQRATQLIGVEHEVAAKIATATAPLNTVGFHEPP  121
            TDT  S T AEQAARQAQAQA AGDIR  A QL G + +VA ++  ATA L++VGF + P
Sbjct  114  TDTHRSGTPAEQAARQAQAQAFAGDIRLHARQLDGADAKVAGQLTAATADLSSVGFAQNP  173

Query  122  IAPSLPTPVPHNEKPQIHAVDRSWKQDPPSPMPGDPKD  159
            I P+   P  H    Q+  VD  +KQ+   P P  P D
Sbjct  174  I-PATQAPTTHRNGVQL--VD--FKQNGGEPPPFAPWD  206


>gi|15609214|ref|NP_216593.1| transmembrane protein [Mycobacterium tuberculosis H37Rv]
 gi|15841566|ref|NP_336603.1| hypothetical protein MT2137 [Mycobacterium tuberculosis CDC1551]
 gi|31793259|ref|NP_855752.1| transmembrane protein [Mycobacterium bovis AF2122/97]
 80 more sequence titles
 
gi|121637961|ref|YP_978185.1| putative transmembrane protein [Mycobacterium bovis BCG str. 
Pasteur 1173P2]
 gi|148661891|ref|YP_001283414.1| putative transmembrane protein [Mycobacterium tuberculosis H37Ra]
 gi|148823291|ref|YP_001288045.1| transmembrane protein [Mycobacterium tuberculosis F11]
 gi|167967782|ref|ZP_02550059.1| conserved transmembrane protein [Mycobacterium tuberculosis H37Ra]
 gi|224990455|ref|YP_002645142.1| putative transmembrane protein [Mycobacterium bovis BCG str. 
Tokyo 172]
 gi|253798866|ref|YP_003031867.1| hypothetical protein TBMG_01905 [Mycobacterium tuberculosis KZN 
1435]
 gi|254232243|ref|ZP_04925570.1| hypothetical protein TBCG_02028 [Mycobacterium tuberculosis C]
 gi|254364889|ref|ZP_04980935.1| conserved transmembrane protein [Mycobacterium tuberculosis str. 
Haarlem]
 gi|254551104|ref|ZP_05141551.1| hypothetical protein Mtube_11681 [Mycobacterium tuberculosis 
'98-R604 INH-RIF-EM']
 gi|289443581|ref|ZP_06433325.1| conserved membrane protein [Mycobacterium tuberculosis T46]
 gi|289447696|ref|ZP_06437440.1| conserved membrane protein [Mycobacterium tuberculosis CPHL_A]
 gi|289554139|ref|ZP_06443349.1| conserved membrane protein [Mycobacterium tuberculosis KZN 605]
 gi|289570187|ref|ZP_06450414.1| conserved membrane protein [Mycobacterium tuberculosis T17]
 gi|289574755|ref|ZP_06454982.1| transmembrane protein [Mycobacterium tuberculosis K85]
 gi|289745351|ref|ZP_06504729.1| transmembrane protein [Mycobacterium tuberculosis 02_1987]
 gi|289750671|ref|ZP_06510049.1| conserved membrane protein [Mycobacterium tuberculosis T92]
 gi|289754187|ref|ZP_06513565.1| transmembrane protein [Mycobacterium tuberculosis EAS054]
 gi|289758196|ref|ZP_06517574.1| transmembrane protein [Mycobacterium tuberculosis T85]
 gi|289762234|ref|ZP_06521612.1| conserved transmembrane protein [Mycobacterium tuberculosis GM 
1503]
 gi|294997016|ref|ZP_06802707.1| hypothetical protein Mtub2_21558 [Mycobacterium tuberculosis 
210]
 gi|297634654|ref|ZP_06952434.1| hypothetical protein MtubK4_11056 [Mycobacterium tuberculosis 
KZN 4207]
 gi|297731641|ref|ZP_06960759.1| hypothetical protein MtubKR_11156 [Mycobacterium tuberculosis 
KZN R506]
 gi|298525579|ref|ZP_07012988.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
 gi|306776315|ref|ZP_07414652.1| conserved membrane protein [Mycobacterium tuberculosis SUMu001]
 gi|306780101|ref|ZP_07418438.1| conserved membrane protein [Mycobacterium tuberculosis SUMu002]
 gi|306784847|ref|ZP_07423169.1| conserved membrane protein [Mycobacterium tuberculosis SUMu003]
 gi|306789211|ref|ZP_07427533.1| conserved membrane protein [Mycobacterium tuberculosis SUMu004]
 gi|306793543|ref|ZP_07431845.1| conserved membrane protein [Mycobacterium tuberculosis SUMu005]
 gi|306797928|ref|ZP_07436230.1| conserved membrane protein [Mycobacterium tuberculosis SUMu006]
 gi|306803807|ref|ZP_07440475.1| conserved membrane protein [Mycobacterium tuberculosis SUMu008]
 gi|306808380|ref|ZP_07445048.1| conserved membrane protein [Mycobacterium tuberculosis SUMu007]
 gi|306968202|ref|ZP_07480863.1| conserved membrane protein [Mycobacterium tuberculosis SUMu009]
 gi|306972429|ref|ZP_07485090.1| conserved membrane protein [Mycobacterium tuberculosis SUMu010]
 gi|307080137|ref|ZP_07489307.1| conserved membrane protein [Mycobacterium tuberculosis SUMu011]
 gi|307084718|ref|ZP_07493831.1| conserved membrane protein [Mycobacterium tuberculosis SUMu012]
 gi|313658976|ref|ZP_07815856.1| hypothetical protein MtubKV_11171 [Mycobacterium tuberculosis 
KZN V2475]
 gi|339632112|ref|YP_004723754.1| hypothetical protein MAF_20900 [Mycobacterium africanum GM041182]
 gi|54040435|sp|P64934.1|Y2102_MYCBO RecName: Full=Uncharacterized protein Mb2102c; Flags: Precursor
 gi|54042572|sp|P64933.1|Y2077_MYCTU RecName: Full=Uncharacterized protein Rv2077c/MT2137; Flags: 
Precursor
 gi|1370243|emb|CAA98222.1| POSSIBLE CONSERVED TRANSMEMBRANE PROTEIN [Mycobacterium tuberculosis 
H37Rv]
 gi|13881813|gb|AAK46417.1| hypothetical protein MT2137 [Mycobacterium tuberculosis CDC1551]
 gi|31618851|emb|CAD96955.1| POSSIBLE CONSERVED TRANSMEMBRANE PROTEIN [Mycobacterium bovis 
AF2122/97]
 gi|121493609|emb|CAL72083.1| Possible conserved transmembrane protein [Mycobacterium bovis 
BCG str. Pasteur 1173P2]
 gi|124601302|gb|EAY60312.1| hypothetical protein TBCG_02028 [Mycobacterium tuberculosis C]
 gi|134150403|gb|EBA42448.1| conserved transmembrane protein [Mycobacterium tuberculosis str. 
Haarlem]
 gi|148506043|gb|ABQ73852.1| putative conserved transmembrane protein [Mycobacterium tuberculosis 
H37Ra]
 gi|148721818|gb|ABR06443.1| conserved transmembrane protein [Mycobacterium tuberculosis F11]
 gi|224773568|dbj|BAH26374.1| putative transmembrane protein [Mycobacterium bovis BCG str. 
Tokyo 172]
 gi|253320369|gb|ACT24972.1| conserved membrane protein [Mycobacterium tuberculosis KZN 1435]
 gi|289416500|gb|EFD13740.1| conserved membrane protein [Mycobacterium tuberculosis T46]
 gi|289420654|gb|EFD17855.1| conserved membrane protein [Mycobacterium tuberculosis CPHL_A]
 gi|289438771|gb|EFD21264.1| conserved membrane protein [Mycobacterium tuberculosis KZN 605]
 gi|289539186|gb|EFD43764.1| transmembrane protein [Mycobacterium tuberculosis K85]
 gi|289543941|gb|EFD47589.1| conserved membrane protein [Mycobacterium tuberculosis T17]
 gi|289685879|gb|EFD53367.1| transmembrane protein [Mycobacterium tuberculosis 02_1987]
 gi|289691258|gb|EFD58687.1| conserved membrane protein [Mycobacterium tuberculosis T92]
 gi|289694774|gb|EFD62203.1| transmembrane protein [Mycobacterium tuberculosis EAS054]
 gi|289709740|gb|EFD73756.1| conserved transmembrane protein [Mycobacterium tuberculosis GM 
1503]
 gi|289713760|gb|EFD77772.1| transmembrane protein [Mycobacterium tuberculosis T85]
 gi|298495373|gb|EFI30667.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
 gi|308215270|gb|EFO74669.1| conserved membrane protein [Mycobacterium tuberculosis SUMu001]
 gi|308327008|gb|EFP15859.1| conserved membrane protein [Mycobacterium tuberculosis SUMu002]
 gi|308330443|gb|EFP19294.1| conserved membrane protein [Mycobacterium tuberculosis SUMu003]
 gi|308334276|gb|EFP23127.1| conserved membrane protein [Mycobacterium tuberculosis SUMu004]
 gi|308338077|gb|EFP26928.1| conserved membrane protein [Mycobacterium tuberculosis SUMu005]
 gi|308341769|gb|EFP30620.1| conserved membrane protein [Mycobacterium tuberculosis SUMu006]
 gi|308345254|gb|EFP34105.1| conserved membrane protein [Mycobacterium tuberculosis SUMu007]
 gi|308349555|gb|EFP38406.1| conserved membrane protein [Mycobacterium tuberculosis SUMu008]
 gi|308354185|gb|EFP43036.1| conserved membrane protein [Mycobacterium tuberculosis SUMu009]
 gi|308358138|gb|EFP46989.1| conserved membrane protein [Mycobacterium tuberculosis SUMu010]
 gi|308362065|gb|EFP50916.1| conserved membrane protein [Mycobacterium tuberculosis SUMu011]
 gi|308365704|gb|EFP54555.1| conserved membrane protein [Mycobacterium tuberculosis SUMu012]
 gi|323719372|gb|EGB28511.1| membrane protein [Mycobacterium tuberculosis CDC1551A]
 gi|326903690|gb|EGE50623.1| conserved membrane protein [Mycobacterium tuberculosis W-148]
 gi|328458623|gb|AEB04046.1| conserved membrane protein [Mycobacterium tuberculosis KZN 4207]
 gi|339294999|gb|AEJ47110.1| transmembrane protein [Mycobacterium tuberculosis CCDC5079]
 gi|339298623|gb|AEJ50733.1| transmembrane protein [Mycobacterium tuberculosis CCDC5180]
 gi|339331468|emb|CCC27160.1| putative conserved transmembrane protein [Mycobacterium africanum 
GM041182]
 gi|341601999|emb|CCC64673.1| possible conserved transmembrane protein [Mycobacterium bovis 
BCG str. Moreau RDJ]
 gi|344219903|gb|AEN00534.1| transmembrane protein [Mycobacterium tuberculosis CTRI-2]
Length=323

 Score =  118 bits (295),  Expect = 1e-24, Method: Compositional matrix adjust.
 Identities = 74/121 (62%), Positives = 91/121 (76%), Gaps = 0/121 (0%)

Query  2    LRQRTGADLQIVSGIAEHLRQASGLAREGAGTIGAAQRRVIYAVQDAHNAGFNVEEDLSV  61
            LRQRT AD   VSGIA+ LR+A+ +AR GAGTI AAQRRV+YAV+DA +AGFNV EDLSV
Sbjct  54   LRQRTRADFSTVSGIADQLRRAATIARNGAGTIDAAQRRVMYAVEDAQDAGFNVGEDLSV  113

Query  62   TDTRTSRTFAEQAARQAQAQALAGDIRQRATQLIGVEHEVAAKIATATAPLNTVGFHEPP  121
            TDT+T++  A QAAR AQAQALAGDIR R  QL+  E+EV+ ++A  T  +  V F   P
Sbjct  114  TDTKTTQPAAVQAARLAQAQALAGDIRLRVGQLVAAENEVSGQLAATTGDVGNVRFAGAP  173

Query  122  I  122
            +
Sbjct  174  V  174


>gi|342860790|ref|ZP_08717440.1| hypothetical protein MCOL_18003 [Mycobacterium colombiense CECT 
3035]
 gi|342131814|gb|EGT85071.1| hypothetical protein MCOL_18003 [Mycobacterium colombiense CECT 
3035]
Length=356

 Score =  111 bits (277),  Expect = 2e-22, Method: Compositional matrix adjust.
 Identities = 66/150 (44%), Positives = 92/150 (62%), Gaps = 8/150 (5%)

Query  2    LRQRTGADLQIVSGIAEHLRQASGLAREGAGTIGAAQRRVIYAVQDAHNAGFNVEEDLSV  61
            L   T  DLQ  S +A+ L+ A+ +AR GA  + AA+ RV Y V+DA  AGF+V ED+SV
Sbjct  59   LHAATHGDLQKTSAVADQLQAAAKVARSGAADLSAARSRVRYVVEDAFGAGFDVREDMSV  118

Query  62   TDTRTSRTFAEQAARQAQAQALAGDIRQRATQLIGVEHEVAAKIATATAPLNTVGFHEPP  121
            TD  T  + A++A R+AQAQ  AGDIRQRATQL+ ++ +VA ++ +A A +         
Sbjct  119  TDPSTGGSTAQRATRRAQAQGYAGDIRQRATQLVALDQQVAERVTSAMAGIRDT------  172

Query  122  IAPSLPTPVPHNEKPQIHAVD-RSWKQDPP  150
              PS   P    E+ +  AVD  S+K+DPP
Sbjct  173  -FPSATGPDGPGERSRFRAVDNHSFKEDPP  201


>gi|118466269|ref|YP_881458.1| hypothetical protein MAV_2254 [Mycobacterium avium 104]
 gi|118167556|gb|ABK68453.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=354

 Score =  110 bits (275),  Expect = 3e-22, Method: Compositional matrix adjust.
 Identities = 74/118 (63%), Positives = 90/118 (77%), Gaps = 1/118 (0%)

Query  2    LRQRTGADLQIVSGIAEHLRQASGLAREGAGTIGAAQRRVIYAVQDAHNAGFNVEEDLSV  61
            LRQRTGADL +VSG A+ LRQA+G+AR GA  I AAQRRV+Y V+DA NAGF V EDLSV
Sbjct  54   LRQRTGADLSVVSGKADLLRQAAGIARNGASDISAAQRRVLYGVEDALNAGFTVGEDLSV  113

Query  62   TDTRTSRTFAEQAARQAQAQALAGDIRQRATQLIGVEHEVAAKIATATAPLNTVGFHE  119
            TDTR S + AE+AARQAQA+A A DIR RA QL G + +V+ ++  ATA L+  GF +
Sbjct  114  TDTR-STSPAERAARQAQAEAFAADIRLRAEQLDGADTKVSGQLTAATAGLSGGGFAQ  170


>gi|118464060|ref|YP_880692.1| hypothetical protein MAV_1450 [Mycobacterium avium 104]
 gi|118165347|gb|ABK66244.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=353

 Score =  109 bits (272),  Expect = 7e-22, Method: Compositional matrix adjust.
 Identities = 75/170 (45%), Positives = 97/170 (58%), Gaps = 20/170 (11%)

Query  2    LRQRTGADLQIVSGIAEHLRQASGLAREGAGTIGAAQRRVIYAVQDAHNAGFNVEEDLSV  61
            LR+RT ADL +VS  A+ LRQA+G+AR GA  I AAQRRV+Y ++DA NAGF V EDLSV
Sbjct  54   LRERTQADLSVVSAKADLLRQAAGIARNGASDISAAQRRVVYGIEDAQNAGFTVGEDLSV  113

Query  62   TDTRTSRTFAEQAARQAQAQALAGDIRQRATQLIGVEHEVAAKIATATAPLNTVGF----  117
            TD R++      A +       A DIR RA QL G + +VA ++  ATA L   GF    
Sbjct  114  TDMRSTSPAERAARQAQAEAFAA-DIRLRAEQLDGADTKVAGQLTAATAGLGGDGFAPAS  172

Query  118  ---HEPPIAPS-------LPTPVPHNEKPQIHAVDRSWKQD---PPSPMP  154
                  P A           + VP++++  +H VD  +KQD    PSPMP
Sbjct  173  SHNSRQPSAQKDGGQNRRSTSGVPNSQRGGVHLVD--FKQDGGADPSPMP  220


>gi|254774328|ref|ZP_05215844.1| hypothetical protein MaviaA2_06625 [Mycobacterium avium subsp. 
avium ATCC 25291]
Length=362

 Score =  107 bits (267),  Expect = 2e-21, Method: Compositional matrix adjust.
 Identities = 62/116 (54%), Positives = 77/116 (67%), Gaps = 1/116 (0%)

Query  2    LRQRTGADLQIVSGIAEHLRQASGLAREGAGTIGAAQRRVIYAVQDAHNAGFNVEEDLSV  61
            LR+RT ADL +VS  A+ LRQA+G+AR GA  I AAQRRV+Y ++DA NAGF V EDLSV
Sbjct  54   LRERTQADLSVVSAKADLLRQAAGIARNGASDISAAQRRVVYGIEDAQNAGFTVGEDLSV  113

Query  62   TDTRTSRTFAEQAARQAQAQALAGDIRQRATQLIGVEHEVAAKIATATAPLNTVGF  117
            TDTR++      A +       A DIR RA QL G + +VAA++  ATA L   GF
Sbjct  114  TDTRSTSPAERAARQAQAEAFAA-DIRLRAEQLDGADTKVAAQLTAATAGLGGSGF  168


>gi|118464941|ref|YP_880720.1| hypothetical protein MAV_1479 [Mycobacterium avium 104]
 gi|118166228|gb|ABK67125.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=362

 Score =  104 bits (259),  Expect = 2e-20, Method: Compositional matrix adjust.
 Identities = 60/116 (52%), Positives = 75/116 (65%), Gaps = 1/116 (0%)

Query  2    LRQRTGADLQIVSGIAEHLRQASGLAREGAGTIGAAQRRVIYAVQDAHNAGFNVEEDLSV  61
            LR+RT ADL +VS  A+ LRQA+G+AR GA  I AAQRRV+Y ++DA NAGF V EDLSV
Sbjct  54   LRERTQADLSVVSAKADLLRQAAGIARNGASDISAAQRRVVYGIEDAQNAGFTVGEDLSV  113

Query  62   TDTRTSRTFAEQAARQAQAQALAGDIRQRATQLIGVEHEVAAKIATATAPLNTVGF  117
            TD R++      A +       A DIR RA QL G + +VA ++  ATA L   GF
Sbjct  114  TDMRSTSPAERAARQAQAEAFAA-DIRLRAEQLDGADTKVAGQLTAATAGLGGSGF  168


>gi|183980513|ref|YP_001848804.1| hypothetical protein MMAR_0484 [Mycobacterium marinum M]
 gi|183173839|gb|ACC38949.1| conserved hypothetical transmembrane protein [Mycobacterium marinum 
M]
Length=204

 Score =  103 bits (258),  Expect = 3e-20, Method: Compositional matrix adjust.
 Identities = 65/94 (70%), Positives = 73/94 (78%), Gaps = 2/94 (2%)

Query  2    LRQRTGADLQIVSGIAEHLRQASGLAREGAGTIGAAQRRVIYAVQDAHNAGFNVEEDLSV  61
            LRQRTGADL IVS  A+ LRQAS +AR+GAGTIG AQRRV++AV+DAHNAGF V ED SV
Sbjct  54   LRQRTGADLAIVSTKADELRQASKIARDGAGTIGIAQRRVLHAVEDAHNAGFTVGEDFSV  113

Query  62   TDTRTSRT--FAEQAARQAQAQALAGDIRQRATQ  93
            TD RTSR+         QAQAQALA DIRQRA +
Sbjct  114  TDIRTSRSSAEQAARQAQAQAQALATDIRQRAVE  147


>gi|118616857|ref|YP_905189.1| hypothetical protein MUL_1136 [Mycobacterium ulcerans Agy99]
 gi|118568967|gb|ABL03718.1| conserved hypothetical transmembrane protein [Mycobacterium ulcerans 
Agy99]
Length=248

 Score =  100 bits (250),  Expect = 3e-19, Method: Compositional matrix adjust.
 Identities = 51/67 (77%), Positives = 57/67 (86%), Gaps = 0/67 (0%)

Query  2    LRQRTGADLQIVSGIAEHLRQASGLAREGAGTIGAAQRRVIYAVQDAHNAGFNVEEDLSV  61
            LRQRTGADL IVS  A+ LRQAS +AR+GAGTIG AQRRV++AV+DAHNAGF V ED SV
Sbjct  54   LRQRTGADLAIVSTKADELRQASKIARDGAGTIGIAQRRVLHAVEDAHNAGFTVGEDFSV  113

Query  62   TDTRTSR  68
            TD RTSR
Sbjct  114  TDIRTSR  120


>gi|118466271|ref|YP_880360.1| hypothetical protein MAV_1108 [Mycobacterium avium 104]
 gi|118167558|gb|ABK68455.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=348

 Score = 99.8 bits (247),  Expect = 5e-19, Method: Compositional matrix adjust.
 Identities = 77/179 (44%), Positives = 104/179 (59%), Gaps = 13/179 (7%)

Query  2    LRQRTGADLQIVSGIAEHLRQASGLAREGAGTIGAAQRRVIYAVQDAHNAGFNVEEDLSV  61
            LR  T AD+   S +A+ LR A+ +AR GA  + AA+ RV YAV+DAH+AGF+V EDLS+
Sbjct  46   LRGATHADMTSTSAVADQLRAAASVARGGASDLSAARSRVRYAVEDAHSAGFDVGEDLSI  105

Query  62   TDTRTSRTFAEQAARQAQAQALAGDIRQRATQLIGVEHEVAAKIATATAPLNTVGFHEPP  121
             D     + A++AARQAQA+ALAGDIRQRA QL+ ++ EVA KI  A A +     H+P 
Sbjct  106  RDRTVGGSTAQRAARQAQARALAGDIRQRAAQLVSLDQEVAGKITAAVAGVRDTFPHDP-  164

Query  122  IAPSLPTPVPHNEKPQIHAVDRSWKQDPPSPMPGDPKDMTAVQARAAWDAVNADIARYN  180
               + P+   H     +  VD    +D PS        M+  QA+A    VN  I  +N
Sbjct  165  -TANRPSTDGH-----VRGVDNHTFKDAPS------SGMSREQAKAGLKDVNKRIWEHN  211


>gi|118465678|ref|YP_879971.1| hypothetical protein MAV_0692 [Mycobacterium avium 104]
 gi|118166965|gb|ABK67862.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=256

 Score = 99.4 bits (246),  Expect = 7e-19, Method: Compositional matrix adjust.
 Identities = 70/109 (65%), Positives = 84/109 (78%), Gaps = 2/109 (1%)

Query  2    LRQRTGADLQIVSGIAEHLRQASGLAREGAGTIGAAQRRVIYAVQDAHNAGFNVEEDLSV  61
            LRQRTGAD+ +VSG A+ LRQA+G+AR GA  I AAQRRV+Y V+DA NAGF V EDLSV
Sbjct  54   LRQRTGADVSVVSGKADQLRQAAGIARNGASEISAAQRRVLYGVEDAQNAGFTVGEDLSV  113

Query  62   TDTRTSRTFAEQAARQAQAQALAGDIRQRATQLIGVEHEVAAKIATATA  110
            TDTR S + AE+AARQAQA+A A D+R RA QL   + + A +I TATA
Sbjct  114  TDTR-STSPAERAARQAQAEAFAADLRLRAEQLEAADTKAAGQI-TATA  160


>gi|336457784|gb|EGO36778.1| hypothetical protein MAPs_18830 [Mycobacterium avium subsp. paratuberculosis 
S397]
Length=356

 Score = 95.1 bits (235),  Expect = 1e-17, Method: Compositional matrix adjust.
 Identities = 67/150 (45%), Positives = 94/150 (63%), Gaps = 8/150 (5%)

Query  2    LRQRTGADLQIVSGIAEHLRQASGLAREGAGTIGAAQRRVIYAVQDAHNAGFNVEEDLSV  61
            L   T  D+   SG+A+ LR A+G+AR GA  + AA+ RV YAV+DA  +GF+V ED+SV
Sbjct  59   LHAATHDDVGKTSGVADQLRAAAGVARSGACELVAARSRVRYAVEDAMRSGFDVYEDMSV  118

Query  62   TDTRTSRTFAEQAARQAQAQALAGDIRQRATQLIGVEHEVAAKIATATAPLNTVGFHEPP  121
             D  T  + A++AARQAQAQA AGDIR+RA +L+ ++ +VA ++  ATA +         
Sbjct  119  ADRSTGGSAAQRAARQAQAQAFAGDIRRRAAELVALDQQVAGRVTAATAGIRDT------  172

Query  122  IAPSLPTPVPHNEKPQIHAVD-RSWKQDPP  150
              P  P       KP+ HAVD  ++K+DPP
Sbjct  173  -FPQTPDSDAPQRKPKFHAVDHHTFKEDPP  201


>gi|41407431|ref|NP_960267.1| hypothetical protein MAP1333 [Mycobacterium avium subsp. paratuberculosis 
K-10]
 gi|41395783|gb|AAS03650.1| hypothetical protein MAP_1333 [Mycobacterium avium subsp. paratuberculosis 
K-10]
Length=261

 Score = 95.1 bits (235),  Expect = 1e-17, Method: Compositional matrix adjust.
 Identities = 67/150 (45%), Positives = 94/150 (63%), Gaps = 8/150 (5%)

Query  2    LRQRTGADLQIVSGIAEHLRQASGLAREGAGTIGAAQRRVIYAVQDAHNAGFNVEEDLSV  61
            L   T  D+   SG+A+ LR A+G+AR GA  + AA+ RV YAV+DA  +GF+V ED+SV
Sbjct  59   LHAATHDDVGKTSGVADQLRAAAGVARSGACELVAARSRVRYAVEDAMRSGFDVYEDMSV  118

Query  62   TDTRTSRTFAEQAARQAQAQALAGDIRQRATQLIGVEHEVAAKIATATAPLNTVGFHEPP  121
             D  T  + A++AARQAQAQA AGDIR+RA +L+ ++ +VA ++  ATA +         
Sbjct  119  ADRSTGGSAAQRAARQAQAQAFAGDIRRRAAELVALDQQVAGRVTAATAGIRDT------  172

Query  122  IAPSLPTPVPHNEKPQIHAVD-RSWKQDPP  150
              P  P       KP+ HAVD  ++K+DPP
Sbjct  173  -FPQTPDSDAPQRKPKFHAVDHHTFKEDPP  201


>gi|342860951|ref|ZP_08717600.1| hypothetical protein MCOL_18807 [Mycobacterium colombiense CECT 
3035]
 gi|342131395|gb|EGT84665.1| hypothetical protein MCOL_18807 [Mycobacterium colombiense CECT 
3035]
Length=403

 Score = 94.4 bits (233),  Expect = 2e-17, Method: Compositional matrix adjust.
 Identities = 65/116 (57%), Positives = 78/116 (68%), Gaps = 0/116 (0%)

Query  2    LRQRTGADLQIVSGIAEHLRQASGLAREGAGTIGAAQRRVIYAVQDAHNAGFNVEEDLSV  61
            LRQRT ADL  VS  A+ LRQA+G+AR GA  I AAQR V+ AV DA NAGF+V EDLSV
Sbjct  55   LRQRTAADLSTVSSKADQLRQAAGIARSGASDISAAQRSVLNAVADAENAGFDVGEDLSV  114

Query  62   TDTRTSRTFAEQAARQAQAQALAGDIRQRATQLIGVEHEVAAKIATATAPLNTVGF  117
            + T    T ++QAARQAQA+ +A  I  RA QL G E +VA ++ TAT  L    F
Sbjct  115  SYTDHGGTASQQAARQAQAEQMASQIWSRAKQLDGTEVKVADQLTTATTGLGNATF  170


>gi|183983552|ref|YP_001851843.1| hypothetical protein MMAR_3572 [Mycobacterium marinum M]
 gi|183176878|gb|ACC41988.1| conserved hypothetical membrane protein [Mycobacterium marinum 
M]
Length=301

 Score = 93.6 bits (231),  Expect = 4e-17, Method: Compositional matrix adjust.
 Identities = 61/114 (54%), Positives = 78/114 (69%), Gaps = 0/114 (0%)

Query  2    LRQRTGADLQIVSGIAEHLRQASGLAREGAGTIGAAQRRVIYAVQDAHNAGFNVEEDLSV  61
            L  RT AD   VSG+ + L +A+ +AR GA  + AA+ RV YAV+DAH+AGF V EDLSV
Sbjct  60   LHTRTHADHTKVSGLVDQLHEAARIARVGASDLYAARSRVRYAVEDAHDAGFVVGEDLSV  119

Query  62   TDTRTSRTFAEQAARQAQAQALAGDIRQRATQLIGVEHEVAAKIATATAPLNTV  115
            TD  T  +  E+A RQAQAQALA DIRQRA  LI ++ ++A K+ TA A +  V
Sbjct  120  TDYSTGGSLVERATRQAQAQALAADIRQRAGLLISLDGQLAGKVTTAMAGIGNV  173


>gi|254775594|ref|ZP_05217110.1| hypothetical protein MaviaA2_13128 [Mycobacterium avium subsp. 
avium ATCC 25291]
Length=298

 Score = 92.4 bits (228),  Expect = 9e-17, Method: Compositional matrix adjust.
 Identities = 76/186 (41%), Positives = 105/186 (57%), Gaps = 14/186 (7%)

Query  6    TGADLQIVSGIAEHLRQASGLAREGAGTIGAAQRRVIYAVQDAHNAGFNVEEDLSVTDTR  65
            T  D    SG+A+ LR A+G+AR GA  + AA+ RV YAV+DA  +GF+V ED+SV D  
Sbjct  5    THDDAGKTSGVADQLRAAAGVARSGASELVAARSRVRYAVEDAMRSGFDVYEDMSVADRS  64

Query  66   TSRTFAEQAARQAQAQALAGDIRQRATQLIGVEHEVAAKIATATAPLNTVGFHEPPIAPS  125
            T  + A++AARQAQAQA AGDIR+RA +L+ ++ +VA ++  ATA +           P 
Sbjct  65   TGGSAAQRAARQAQAQAFAGDIRRRAAELVALDQQVAGRVTAATAGIRDT-------FPQ  117

Query  126  LPTPVPHNEKPQIHAVD-RSWKQDPPSPMPGDPKDMTAVQARAAWDAVNADIAR---YNA  181
             P       KP+  AVD  ++K+DPP   P     +  V A A     N  + R   YNA
Sbjct  118  TPDSDAPQRKPKFQAVDHHTFKEDPP---PNGSYPVNEVVAEATDLDGNHVVLRRGYYNA  174

Query  182  RCGRTF  187
            +  R F
Sbjct  175  KTDRGF  180


>gi|118464597|ref|YP_882327.1| hypothetical protein MAV_3143 [Mycobacterium avium 104]
 gi|118165884|gb|ABK66781.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=353

 Score = 91.7 bits (226),  Expect = 2e-16, Method: Compositional matrix adjust.
 Identities = 66/150 (44%), Positives = 92/150 (62%), Gaps = 8/150 (5%)

Query  2    LRQRTGADLQIVSGIAEHLRQASGLAREGAGTIGAAQRRVIYAVQDAHNAGFNVEEDLSV  61
            L   T  D    SG+A+ LR A+G+AR GA  + AA+ RV YAV+DA  +GF+V ED+SV
Sbjct  56   LHAATHDDAGKTSGVADQLRAAAGVARSGASELVAARSRVRYAVEDAMRSGFDVYEDMSV  115

Query  62   TDTRTSRTFAEQAARQAQAQALAGDIRQRATQLIGVEHEVAAKIATATAPLNTVGFHEPP  121
             D  T  + A++AARQAQAQA AGDIR+RA +L+ ++ +VA ++  ATA +         
Sbjct  116  ADRSTGGSAAQRAARQAQAQAFAGDIRRRAAELVALDQQVAGRVTAATAGIRDT------  169

Query  122  IAPSLPTPVPHNEKPQIHAVD-RSWKQDPP  150
              P  P       KP+  AVD  ++K+DPP
Sbjct  170  -FPQTPDSDAPQRKPKFQAVDHHTFKEDPP  198


>gi|240170349|ref|ZP_04749008.1| hypothetical protein MkanA1_13635 [Mycobacterium kansasii ATCC 
12478]
Length=346

 Score = 91.3 bits (225),  Expect = 2e-16, Method: Compositional matrix adjust.
 Identities = 66/165 (40%), Positives = 87/165 (53%), Gaps = 7/165 (4%)

Query  2    LRQRTGADLQIVSGIAEHL-RQASGLAREGAGTIGAAQRRVIYAVQDAHNAGFNVEEDLS  60
            LR  TGAD  I + + + + +QA   AR GA  I  A+ R+ Y VQDA  AGF+V ED+S
Sbjct  57   LRAATGADKTIAANVYDQVTQQACKEARSGASQILDARNRLKYKVQDAEEAGFSVSEDMS  116

Query  61   VTDTRTSRTFAEQAARQAQAQALAGDIRQRATQLIGVEHEVAAKIATATAPLNTVGFHEP  120
            V DT T+    E A RQAQAQA A DIR RA +L+  + +VA K+    A +    F EP
Sbjct  117  VYDTHTTANPVELADRQAQAQAFAEDIRLRAAKLVTADTDVAQKVTATMAGIGPQAFGEP  176

Query  121  PIAPSLPTPVPHNEKPQIHAVDRSWKQ----DPPSPMPGDPKDMT  161
              A    T +  N+   +  VD +       +PP   P D  D T
Sbjct  177  INADD--TIIGDNKHNGVQLVDFTQDNAAGTNPPPFAPWDTPDGT  219


>gi|118469187|ref|YP_889834.1| hypothetical protein MSMEG_5600 [Mycobacterium smegmatis str. 
MC2 155]
 gi|118170474|gb|ABK71370.1| conserved hypothetical protein [Mycobacterium smegmatis str. 
MC2 155]
Length=383

 Score = 90.9 bits (224),  Expect = 2e-16, Method: Compositional matrix adjust.
 Identities = 73/234 (32%), Positives = 107/234 (46%), Gaps = 21/234 (8%)

Query  4    QRTGADLQIVSGIAEHLRQASGLAREGAGTIGAAQRRVIYAVQDAHNAGFNVEEDLSVTD  63
            +R   +L  V    +  R A+ LA   +  I AA+R  + ++ DA   GF V EDLSV D
Sbjct  70   ERATQNLNTVRAAGDIARSAADLAENSSADISAAKRDALQSISDAEADGFEVNEDLSVRD  129

Query  64   TRTSRT-FAEQAARQAQAQALAGDIRQRATQLIGVEHEVAAKIATATAPLNTVGFHEPPI  122
            T  SR   +  AAR   A+  A +I+  A QL+  +  +  ++    A LN V F + P 
Sbjct  130  T--SRVDVSTMAARYTAAREHAENIQWNANQLLATDTLIGRRLTAKAAELNGVRFDDEP-  186

Query  123  APSLPTPVPHNEKPQIHAVDRSWKQDPPSPMPGDPKDMTAVQARAAWDAVNADIARYNAR  182
                          +  +    +KQ P   +      +T  QA AAW+ +  DIA YN+R
Sbjct  187  ----------EGTIRAASFGDGFKQSPFDDL------LTKEQALAAWEKLQTDIASYNSR  230

Query  183  CGRTFVLPNEQAAYDACIADKGSLFERQAAIRARLGELGVPVEGEPPPAPDPAG  236
            C    V P     Y AC  +   L  ++AA+RARL + G+   GE P +    G
Sbjct  231  CAVNIVGPLPPPQYAACQQELAFLQGQEAALRARLADFGIH-PGEAPSSTSSGG  283


>gi|296170642|ref|ZP_06852217.1| conserved hypothetical protein [Mycobacterium parascrofulaceum 
ATCC BAA-614]
 gi|295894631|gb|EFG74365.1| conserved hypothetical protein [Mycobacterium parascrofulaceum 
ATCC BAA-614]
Length=281

 Score = 87.8 bits (216),  Expect = 2e-15, Method: Compositional matrix adjust.
 Identities = 61/114 (54%), Positives = 80/114 (71%), Gaps = 0/114 (0%)

Query  2    LRQRTGADLQIVSGIAEHLRQASGLAREGAGTIGAAQRRVIYAVQDAHNAGFNVEEDLSV  61
            L+ RT AD   VSG+ + L +A+ +AR GA  + AA+ RV YAV+DA +AGF V EDLSV
Sbjct  46   LQTRTYADKLKVSGLVDQLHEAAKVARAGASDLYAARSRVRYAVEDARDAGFAVGEDLSV  105

Query  62   TDTRTSRTFAEQAARQAQAQALAGDIRQRATQLIGVEHEVAAKIATATAPLNTV  115
            TD  T  + A ++ARQAQAQA A DIRQRA QLIG++ +VA+K+  A A +  V
Sbjct  106  TDRSTGGSSAARSARQAQAQAFAADIRQRAVQLIGLDEQVASKVNAAMAGVGNV  159


>gi|41407315|ref|NP_960151.1| hypothetical protein MAP1217c [Mycobacterium avium subsp. paratuberculosis 
K-10]
 gi|41395667|gb|AAS03534.1| hypothetical protein MAP_1217c [Mycobacterium avium subsp. paratuberculosis 
K-10]
 gi|336458045|gb|EGO37032.1| hypothetical protein MAPs_17430 [Mycobacterium avium subsp. paratuberculosis 
S397]
Length=259

 Score = 87.8 bits (216),  Expect = 2e-15, Method: Compositional matrix adjust.
 Identities = 81/234 (35%), Positives = 115/234 (50%), Gaps = 33/234 (14%)

Query  2    LRQRTGADLQIVSGIAEHLRQASGLAREGAGTIGAAQRRVIYAVQDAHNAGFNVEEDLSV  61
            LR RT AD   VS + + L +A+ +AR GA  + AA+ R+  AV DAH AGF V EDLSV
Sbjct  58   LRSRTYADKVKVSDMVDQLHEAAKVARAGATDLSAARSRMRNAVVDAHEAGFYVHEDLSV  117

Query  62   TDTRTSRTFAEQAARQAQAQALAGDIRQRATQLIGVEHEVAAKIATATAPLNTVGFHEPP  121
            TD  T  + A++A R+A+A+A A DI QRA  LI  +   A +I+ A A LN     + P
Sbjct  118  TDLSTGNSSADRAIREAEAEAYAADIHQRAADLIRADVRTADRISNAMAGLNG----QVP  173

Query  122  IAPSLPTPVPHNEKPQIHAVDRSWKQDPPSPMPGDPKDMTAVQARAAWDAVNADIARYNA  181
             +PS PTP P                        DP ++        W  +  +I  +N 
Sbjct  174  ESPSTPTPQPSE--------------------CADPTELLH-----DWSELINEINEHNE  208

Query  182  RCGRTFVLPNEQAAYDACIADKGSLFERQAAIRARLGELGVPVEGEPPPAPDPA  235
            R    +  P E AAY+    +  +L  +   + + L + G+P    P PAP P+
Sbjct  209  RQYNPYD-PAEVAAYEE---EYLNLNAKLLKLSSELLDCGIPTSVTPAPAPTPS  258


>gi|118464287|ref|YP_882469.1| hypothetical protein MAV_3287 [Mycobacterium avium 104]
 gi|118165574|gb|ABK66471.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=232

 Score = 86.7 bits (213),  Expect = 4e-15, Method: Compositional matrix adjust.
 Identities = 81/234 (35%), Positives = 115/234 (50%), Gaps = 33/234 (14%)

Query  2    LRQRTGADLQIVSGIAEHLRQASGLAREGAGTIGAAQRRVIYAVQDAHNAGFNVEEDLSV  61
            LR RT AD   VS + + L +A+ +AR GA  + AA+ R+  AV DAH AGF V EDLSV
Sbjct  31   LRSRTYADKVKVSDMVDQLHEAARVARAGATDLSAARSRMRNAVVDAHEAGFYVHEDLSV  90

Query  62   TDTRTSRTFAEQAARQAQAQALAGDIRQRATQLIGVEHEVAAKIATATAPLNTVGFHEPP  121
            TD  T  + A++A R+A+A+A A DI QRA  LI  +   A +I+ A A LN     + P
Sbjct  91   TDLSTGNSSADRAIREAEAEAYAADIHQRAADLIRADVRTADRISNAMAGLNG----QVP  146

Query  122  IAPSLPTPVPHNEKPQIHAVDRSWKQDPPSPMPGDPKDMTAVQARAAWDAVNADIARYNA  181
             +PS PTP P                        DP ++        W  +  +I  +N 
Sbjct  147  ESPSTPTPQPSE--------------------CADPTELLH-----DWSELINEINEHNE  181

Query  182  RCGRTFVLPNEQAAYDACIADKGSLFERQAAIRARLGELGVPVEGEPPPAPDPA  235
            R    +  P E AAY+    +  +L  +   + + L + G+P    P PAP P+
Sbjct  182  RQYNPYD-PAEVAAYEE---EYLNLNAKLLKLSSELLDCGIPTSVTPAPAPTPS  231


>gi|296164510|ref|ZP_06847081.1| conserved hypothetical protein [Mycobacterium parascrofulaceum 
ATCC BAA-614]
 gi|295900110|gb|EFG79545.1| conserved hypothetical protein [Mycobacterium parascrofulaceum 
ATCC BAA-614]
Length=406

 Score = 81.3 bits (199),  Expect = 2e-13, Method: Compositional matrix adjust.
 Identities = 67/156 (43%), Positives = 93/156 (60%), Gaps = 8/156 (5%)

Query  2    LRQRTGADLQIVSGIAEHLRQASGLAREGAGTIGAAQRRVIYAVQDAHNAGFNVEEDLSV  61
            LR  T AD+   S  A+ L  A+ +AR GA  +  A+ R+ YAV+DA  AGF+V +DLSV
Sbjct  59   LRTGTHADMMATSRAADQLLLAAKVARNGATDLYGARSRLRYAVEDADAAGFDVGQDLSV  118

Query  62   TDTRTSRTFAEQAARQAQAQALAGDIRQRATQLIGVEHEVAAKIATATAPLNTVGFHEPP  121
             D     +   +AARQAQAQA A DIRQRA QL+ ++ +VA K+  ATA +      +P 
Sbjct  119  ADRSYGASATIRAARQAQAQAFAADIRQRAAQLVALDQQVAGKVTAATAGIRDTFPPDPG  178

Query  122  IAPSLPTPVPHNEKPQIHAVD-RSWKQDPPSPMPGD  156
             A S     PH  +P++ AVD  ++++DPP P   D
Sbjct  179  AATS-----PH--EPEVRAVDNHTFQRDPPPPGSTD  207


>gi|340627558|ref|YP_004746010.1| hypothetical protein MCAN_25831 [Mycobacterium canettii CIPT 
140010059]
 gi|340005748|emb|CCC44914.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059]
Length=361

 Score = 62.0 bits (149),  Expect = 1e-07, Method: Compositional matrix adjust.
 Identities = 45/127 (36%), Positives = 66/127 (52%), Gaps = 11/127 (8%)

Query  41   VIYAVQDAHNAGFNVEEDLSVTDTRTSRTFAEQAARQAQAQALAGDIRQRATQLIGVEHE  100
            ++ AV DA   GF V ED +VTD  T  +  ++AAR  QAQ  A  IR R   L+  + E
Sbjct  1    MLDAVSDARRDGFAVGEDYTVTDRSTGGSRQQRAARLGQAQGHADFIRHRVGALLATDRE  60

Query  101  VAAKIATATAPLNTVGFHEPPIAPSLPTPVPHNEKPQIHAVDRSWKQDPPSPMPG--DPK  158
            +A +++ AT  L+ + F E    P + TP     +  + AVD  ++Q PP   PG     
Sbjct  61   IATRVSAATQGLDELAFEE---VPGVDTPA----EDGVQAVD--FRQAPPPAAPGGMSSG  111

Query  159  DMTAVQA  165
            D+ A+ A
Sbjct  112  DIDAIDA  118


>gi|254551592|ref|ZP_05142039.1| hypothetical protein Mtube_14227 [Mycobacterium tuberculosis 
'98-R604 INH-RIF-EM']
Length=403

 Score = 59.7 bits (143),  Expect = 5e-07, Method: Compositional matrix adjust.
 Identities = 42/122 (35%), Positives = 65/122 (54%), Gaps = 12/122 (9%)

Query  41   VIYAVQDAHNAGFNVEEDLSVTDTRTSRTFAEQAARQAQAQALAGDIRQRATQLIGVEHE  100
            ++ AV DA   GF V ED +VTD  T  +  ++AAR  QAQ  A  IR R   L+  + +
Sbjct  1    MLDAVSDARRDGFAVGEDYTVTDRSTGGSRQQRAARLGQAQGHADFIRHRVGALLATDRD  60

Query  101  VAAKIATATAPLNTVGFHEPPIAPSLPTPVPHNEKPQIHAVDRSWKQDPPSPMPGDPKDM  160
            +A +++ AT  L+ + F +    P + TP     +  + AVD  ++Q PP   PG P  M
Sbjct  61   IATRVSAATQGLDELAFED---VPGVDTPA----EDGVQAVD--FRQAPP---PGAPGGM  108

Query  161  TA  162
            ++
Sbjct  109  SS  110


>gi|31793724|ref|NP_856217.1| hypothetical protein Mb2571 [Mycobacterium bovis AF2122/97]
 gi|121638426|ref|YP_978650.1| hypothetical protein BCG_2564 [Mycobacterium bovis BCG str. Pasteur 
1173P2]
 gi|148823737|ref|YP_001288491.1| hypothetical protein TBFG_12562 [Mycobacterium tuberculosis F11]
 54 more sequence titles
 
gi|224990920|ref|YP_002645607.1| hypothetical protein JTY_2558 [Mycobacterium bovis BCG str. Tokyo 
172]
 gi|253798378|ref|YP_003031379.1| hypothetical protein TBMG_01431 [Mycobacterium tuberculosis KZN 
1435]
 gi|254366746|ref|ZP_04982789.1| conserved hypothetical protein [Mycobacterium tuberculosis str. 
Haarlem]
 gi|289444077|ref|ZP_06433821.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
 gi|289448190|ref|ZP_06437934.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
 gi|289553669|ref|ZP_06442879.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
605]
 gi|289570706|ref|ZP_06450933.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
 gi|289575247|ref|ZP_06455474.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
 gi|289746335|ref|ZP_06505713.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
 gi|289751160|ref|ZP_06510538.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
 gi|289754657|ref|ZP_06514035.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
 gi|289758671|ref|ZP_06518049.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
 gi|289762710|ref|ZP_06522088.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 
1503]
 gi|294994348|ref|ZP_06800039.1| hypothetical protein Mtub2_07488 [Mycobacterium tuberculosis 
210]
 gi|297635152|ref|ZP_06952932.1| hypothetical protein MtubK4_13570 [Mycobacterium tuberculosis 
KZN 4207]
 gi|297732144|ref|ZP_06961262.1| hypothetical protein MtubKR_13695 [Mycobacterium tuberculosis 
KZN R506]
 gi|298526015|ref|ZP_07013424.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
 gi|306776817|ref|ZP_07415154.1| hypothetical protein TMAG_02346 [Mycobacterium tuberculosis SUMu001]
 gi|306789943|ref|ZP_07428265.1| hypothetical protein TMDG_00255 [Mycobacterium tuberculosis SUMu004]
 gi|306794024|ref|ZP_07432326.1| hypothetical protein TMEG_03217 [Mycobacterium tuberculosis SUMu005]
 gi|306798422|ref|ZP_07436724.1| hypothetical protein TMFG_03769 [Mycobacterium tuberculosis SUMu006]
 gi|307080641|ref|ZP_07489811.1| hypothetical protein TMKG_02970 [Mycobacterium tuberculosis SUMu011]
 gi|313659478|ref|ZP_07816358.1| hypothetical protein MtubKV_13709 [Mycobacterium tuberculosis 
KZN V2475]
 gi|339632569|ref|YP_004724211.1| hypothetical protein MAF_25580 [Mycobacterium africanum GM041182]
 gi|31619318|emb|CAD94756.1| CONSERVED HYPOTHETICAL PROTEIN [SECOND PART] [Mycobacterium bovis 
AF2122/97]
 gi|121494074|emb|CAL72552.1| Conserved hypothetical protein [Mycobacterium bovis BCG str. 
Pasteur 1173P2]
 gi|134152257|gb|EBA44302.1| conserved hypothetical protein [Mycobacterium tuberculosis str. 
Haarlem]
 gi|148722264|gb|ABR06889.1| conserved hypothetical protein [Mycobacterium tuberculosis F11]
 gi|224774033|dbj|BAH26839.1| hypothetical protein JTY_2558 [Mycobacterium bovis BCG str. Tokyo 
172]
 gi|253319881|gb|ACT24484.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
1435]
 gi|289416996|gb|EFD14236.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
 gi|289421148|gb|EFD18349.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
 gi|289438301|gb|EFD20794.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
605]
 gi|289539678|gb|EFD44256.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
 gi|289544460|gb|EFD48108.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
 gi|289686863|gb|EFD54351.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
 gi|289691747|gb|EFD59176.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
 gi|289695244|gb|EFD62673.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
 gi|289710216|gb|EFD74232.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 
1503]
 gi|289714235|gb|EFD78247.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
 gi|298495809|gb|EFI31103.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
 gi|308214744|gb|EFO74143.1| hypothetical protein TMAG_02346 [Mycobacterium tuberculosis SUMu001]
 gi|308333553|gb|EFP22404.1| hypothetical protein TMDG_00255 [Mycobacterium tuberculosis SUMu004]
 gi|308337581|gb|EFP26432.1| hypothetical protein TMEG_03217 [Mycobacterium tuberculosis SUMu005]
 gi|308341245|gb|EFP30096.1| hypothetical protein TMFG_03769 [Mycobacterium tuberculosis SUMu006]
 gi|308361562|gb|EFP50413.1| hypothetical protein TMKG_02970 [Mycobacterium tuberculosis SUMu011]
 gi|323718813|gb|EGB27969.1| hypothetical protein TMMG_02551 [Mycobacterium tuberculosis CDC1551A]
 gi|326904157|gb|EGE51090.1| hypothetical protein TBPG_02050 [Mycobacterium tuberculosis W-148]
 gi|328458148|gb|AEB03571.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
4207]
 gi|339295421|gb|AEJ47532.1| hypothetical protein CCDC5079_2342 [Mycobacterium tuberculosis 
CCDC5079]
 gi|339299041|gb|AEJ51151.1| hypothetical protein CCDC5180_2314 [Mycobacterium tuberculosis 
CCDC5180]
 gi|339331925|emb|CCC27628.1| conserved hypothetical protein [Mycobacterium africanum GM041182]
 gi|341602464|emb|CCC65140.1| conserved hypothetical protein [Mycobacterium bovis BCG str. 
Moreau RDJ]
 gi|344220370|gb|AEN01001.1| hypothetical protein MTCTRI2_2591 [Mycobacterium tuberculosis 
CTRI-2]
Length=403

 Score = 59.7 bits (143),  Expect = 5e-07, Method: Compositional matrix adjust.
 Identities = 42/122 (35%), Positives = 65/122 (54%), Gaps = 12/122 (9%)

Query  41   VIYAVQDAHNAGFNVEEDLSVTDTRTSRTFAEQAARQAQAQALAGDIRQRATQLIGVEHE  100
            ++ AV DA   GF V ED +VTD  T  +  ++AAR  QAQ  A  IR R   L+  + +
Sbjct  1    MLDAVSDARRDGFAVGEDYTVTDRSTGGSRQQRAARLGQAQGHADFIRHRVGALLATDRD  60

Query  101  VAAKIATATAPLNTVGFHEPPIAPSLPTPVPHNEKPQIHAVDRSWKQDPPSPMPGDPKDM  160
            +A +++ AT  L+ + F +    P + TP     +  + AVD  ++Q PP   PG P  M
Sbjct  61   IATRVSAATQGLDELAFED---VPGVDTPA----EDGVQAVD--FRQAPP---PGAPGGM  108

Query  161  TA  162
            ++
Sbjct  109  SS  110


>gi|15609679|ref|NP_217058.1| hypothetical protein Rv2542 [Mycobacterium tuberculosis H37Rv]
 gi|148662380|ref|YP_001283903.1| hypothetical protein MRA_2570 [Mycobacterium tuberculosis H37Ra]
 gi|167968850|ref|ZP_02551127.1| hypothetical protein MtubH3_12785 [Mycobacterium tuberculosis 
H37Ra]
 gi|1781060|emb|CAB06196.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium tuberculosis H37Rv]
 gi|148506532|gb|ABQ74341.1| hypothetical protein MRA_2570 [Mycobacterium tuberculosis H37Ra]
Length=403

 Score = 59.7 bits (143),  Expect = 6e-07, Method: Compositional matrix adjust.
 Identities = 42/122 (35%), Positives = 65/122 (54%), Gaps = 12/122 (9%)

Query  41   VIYAVQDAHNAGFNVEEDLSVTDTRTSRTFAEQAARQAQAQALAGDIRQRATQLIGVEHE  100
            ++ AV DA   GF V ED +VTD  T  +  ++AAR  QAQ  A  IR R   L+  + +
Sbjct  1    MLDAVSDARRDGFAVGEDYTVTDRSTGGSRQQRAARLGQAQGHADFIRHRVGALLATDRD  60

Query  101  VAAKIATATAPLNTVGFHEPPIAPSLPTPVPHNEKPQIHAVDRSWKQDPPSPMPGDPKDM  160
            +A +++ AT  L+ + F +    P + TP     +  + AVD  ++Q PP   PG P  M
Sbjct  61   IATRVSAATQGLDELAFED---VPGVDTPA----EDGVQAVD--FRQAPP---PGAPGGM  108

Query  161  TA  162
            ++
Sbjct  109  SS  110


>gi|307085228|ref|ZP_07494341.1| hypothetical protein TMLG_02269 [Mycobacterium tuberculosis SUMu012]
 gi|308365183|gb|EFP54034.1| hypothetical protein TMLG_02269 [Mycobacterium tuberculosis SUMu012]
Length=446

 Score = 59.7 bits (143),  Expect = 6e-07, Method: Compositional matrix adjust.
 Identities = 42/122 (35%), Positives = 65/122 (54%), Gaps = 12/122 (9%)

Query  41   VIYAVQDAHNAGFNVEEDLSVTDTRTSRTFAEQAARQAQAQALAGDIRQRATQLIGVEHE  100
            ++ AV DA   GF V ED +VTD  T  +  ++AAR  QAQ  A  IR R   L+  + +
Sbjct  1    MLDAVSDARRDGFAVGEDYTVTDRSTGGSRQQRAARLGQAQGHADFIRHRVGALLATDRD  60

Query  101  VAAKIATATAPLNTVGFHEPPIAPSLPTPVPHNEKPQIHAVDRSWKQDPPSPMPGDPKDM  160
            +A +++ AT  L+ + F +    P + TP     +  + AVD  ++Q PP   PG P  M
Sbjct  61   IATRVSAATQGLDELAFED---VPGVDTPA----EDGVQAVD--FRQAPP---PGAPGGM  108

Query  161  TA  162
            ++
Sbjct  109  SS  110


>gi|15607754|ref|NP_215128.1| hypothetical protein Rv0614 [Mycobacterium tuberculosis H37Rv]
 gi|31791797|ref|NP_854290.1| hypothetical protein Mb0631 [Mycobacterium bovis AF2122/97]
 gi|121636533|ref|YP_976756.1| hypothetical protein BCG_0661 [Mycobacterium bovis BCG str. Pasteur 
1173P2]
 25 more sequence titles
 
gi|148660386|ref|YP_001281909.1| hypothetical protein MRA_0623 [Mycobacterium tuberculosis H37Ra]
 gi|224989005|ref|YP_002643692.1| hypothetical protein JTY_0630 [Mycobacterium bovis BCG str. Tokyo 
172]
 gi|254363569|ref|ZP_04979615.1| conserved hypothetical protein [Mycobacterium tuberculosis str. 
Haarlem]
 gi|289442005|ref|ZP_06431749.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
 gi|289446168|ref|ZP_06435912.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
 gi|289573215|ref|ZP_06453442.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
 gi|289752654|ref|ZP_06512032.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
 gi|289760737|ref|ZP_06520115.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 
1503]
 gi|298524102|ref|ZP_07011511.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
 gi|339630683|ref|YP_004722325.1| hypothetical protein MAF_06220 [Mycobacterium africanum GM041182]
 gi|2222743|emb|CAB09971.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium tuberculosis H37Rv]
 gi|31617384|emb|CAD93493.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium bovis AF2122/97]
 gi|121492180|emb|CAL70646.1| Conserved hypothetical protein [Mycobacterium bovis BCG str. 
Pasteur 1173P2]
 gi|134149083|gb|EBA41128.1| conserved hypothetical protein [Mycobacterium tuberculosis str. 
Haarlem]
 gi|148504538|gb|ABQ72347.1| hypothetical protein MRA_0623 [Mycobacterium tuberculosis H37Ra]
 gi|224772118|dbj|BAH24924.1| hypothetical protein JTY_0630 [Mycobacterium bovis BCG str. Tokyo 
172]
 gi|289414924|gb|EFD12164.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
 gi|289419126|gb|EFD16327.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
 gi|289537646|gb|EFD42224.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
 gi|289693241|gb|EFD60670.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
 gi|289708243|gb|EFD72259.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 
1503]
 gi|298493896|gb|EFI29190.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
 gi|339330039|emb|CCC25694.1| conserved hypothetical protein [Mycobacterium africanum GM041182]
 gi|341600549|emb|CCC63219.1| conserved hypothetical protein [Mycobacterium bovis BCG str. 
Moreau RDJ]
 gi|344218437|gb|AEM99067.1| hypothetical protein MTCTRI2_0625 [Mycobacterium tuberculosis 
CTRI-2]
Length=330

 Score = 54.3 bits (129),  Expect = 2e-05, Method: Compositional matrix adjust.
 Identities = 44/97 (46%), Positives = 52/97 (54%), Gaps = 8/97 (8%)

Query  25   GLAREGAGTIGAAQRRVIYAVQDAHNAGFNVEEDLSVTDTRTSRTFAEQAARQAQAQALA  84
            G  R G G + A  R   + + D     F      S+   RTS T AE+ AR AQAQ  A
Sbjct  73   GWPRLGFGVVTAPTR---WTLADGRELLF-----FSLPGPRTSGTAAERVARHAQAQTFA  124

Query  85   GDIRQRATQLIGVEHEVAAKIATATAPLNTVGFHEPP  121
            GDIRQRA QL+  E EVA+KI  ATA + T  F E P
Sbjct  125  GDIRQRAIQLVVSEQEVASKITAATAGIATTTFPETP  161


>gi|289568550|ref|ZP_06448777.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
 gi|289756693|ref|ZP_06516071.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
 gi|308231601|ref|ZP_07663890.1| hypothetical protein TMAG_02494 [Mycobacterium tuberculosis SUMu001]
 21 more sequence titles
 
gi|308370462|ref|ZP_07666938.1| hypothetical protein TMCG_03820 [Mycobacterium tuberculosis SUMu003]
 gi|308371722|ref|ZP_07667234.1| hypothetical protein TMDG_02336 [Mycobacterium tuberculosis SUMu004]
 gi|308373537|ref|ZP_07667602.1| hypothetical protein TMEG_01985 [Mycobacterium tuberculosis SUMu005]
 gi|308374059|ref|ZP_07667702.1| hypothetical protein TMFG_03281 [Mycobacterium tuberculosis SUMu006]
 gi|308375213|ref|ZP_07667969.1| hypothetical protein TMGG_03630 [Mycobacterium tuberculosis SUMu007]
 gi|308376458|ref|ZP_07668277.1| hypothetical protein TMHG_03638 [Mycobacterium tuberculosis SUMu008]
 gi|308377478|ref|ZP_07668521.1| hypothetical protein TMIG_01516 [Mycobacterium tuberculosis SUMu009]
 gi|308378685|ref|ZP_07668802.1| hypothetical protein TMJG_02358 [Mycobacterium tuberculosis SUMu010]
 gi|308379827|ref|ZP_07669057.1| hypothetical protein TMKG_03895 [Mycobacterium tuberculosis SUMu011]
 gi|289542304|gb|EFD45952.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
 gi|289712257|gb|EFD76269.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
 gi|308216616|gb|EFO76015.1| hypothetical protein TMAG_02494 [Mycobacterium tuberculosis SUMu001]
 gi|308331922|gb|EFP20773.1| hypothetical protein TMCG_03820 [Mycobacterium tuberculosis SUMu003]
 gi|308335709|gb|EFP24560.1| hypothetical protein TMDG_02336 [Mycobacterium tuberculosis SUMu004]
 gi|308337288|gb|EFP26139.1| hypothetical protein TMEG_01985 [Mycobacterium tuberculosis SUMu005]
 gi|308343214|gb|EFP32065.1| hypothetical protein TMFG_03281 [Mycobacterium tuberculosis SUMu006]
 gi|308347082|gb|EFP35933.1| hypothetical protein TMGG_03630 [Mycobacterium tuberculosis SUMu007]
 gi|308351025|gb|EFP39876.1| hypothetical protein TMHG_03638 [Mycobacterium tuberculosis SUMu008]
 gi|308355657|gb|EFP44508.1| hypothetical protein TMIG_01516 [Mycobacterium tuberculosis SUMu009]
 gi|308359612|gb|EFP48463.1| hypothetical protein TMJG_02358 [Mycobacterium tuberculosis SUMu010]
 gi|308363540|gb|EFP52391.1| hypothetical protein TMKG_03895 [Mycobacterium tuberculosis SUMu011]
Length=304

 Score = 54.3 bits (129),  Expect = 2e-05, Method: Compositional matrix adjust.
 Identities = 44/97 (46%), Positives = 52/97 (54%), Gaps = 8/97 (8%)

Query  25   GLAREGAGTIGAAQRRVIYAVQDAHNAGFNVEEDLSVTDTRTSRTFAEQAARQAQAQALA  84
            G  R G G + A  R   + + D     F      S+   RTS T AE+ AR AQAQ  A
Sbjct  47   GWPRLGFGVVTAPTR---WTLADGRELLF-----FSLPGPRTSGTAAERVARHAQAQTFA  98

Query  85   GDIRQRATQLIGVEHEVAAKIATATAPLNTVGFHEPP  121
            GDIRQRA QL+  E EVA+KI  ATA + T  F E P
Sbjct  99   GDIRQRAIQLVVSEQEVASKITAATAGIATTTFPETP  135


>gi|15840016|ref|NP_335053.1| hypothetical protein MT0644 [Mycobacterium tuberculosis CDC1551]
 gi|253797551|ref|YP_003030552.1| hypothetical protein TBMG_00622 [Mycobacterium tuberculosis KZN 
1435]
 gi|289552866|ref|ZP_06442076.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
605]
 gi|13880160|gb|AAK44867.1| hypothetical protein MT0644 [Mycobacterium tuberculosis CDC1551]
 gi|253319053|gb|ACT23656.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
1435]
 gi|289437498|gb|EFD19991.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
605]
 gi|328457331|gb|AEB02754.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
4207]
Length=297

 Score = 54.3 bits (129),  Expect = 3e-05, Method: Compositional matrix adjust.
 Identities = 44/97 (46%), Positives = 52/97 (54%), Gaps = 8/97 (8%)

Query  25   GLAREGAGTIGAAQRRVIYAVQDAHNAGFNVEEDLSVTDTRTSRTFAEQAARQAQAQALA  84
            G  R G G + A  R   + + D     F      S+   RTS T AE+ AR AQAQ  A
Sbjct  40   GWPRLGFGVVTAPTR---WTLADGRELLF-----FSLPGPRTSGTAAERVARHAQAQTFA  91

Query  85   GDIRQRATQLIGVEHEVAAKIATATAPLNTVGFHEPP  121
            GDIRQRA QL+  E EVA+KI  ATA + T  F E P
Sbjct  92   GDIRQRAIQLVVSEQEVASKITAATAGIATTTFPETP  128


>gi|340625637|ref|YP_004744089.1| hypothetical protein MCAN_06161 [Mycobacterium canettii CIPT 
140010059]
 gi|340003827|emb|CCC42956.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059]
Length=330

 Score = 54.3 bits (129),  Expect = 3e-05, Method: Compositional matrix adjust.
 Identities = 44/97 (46%), Positives = 52/97 (54%), Gaps = 8/97 (8%)

Query  25   GLAREGAGTIGAAQRRVIYAVQDAHNAGFNVEEDLSVTDTRTSRTFAEQAARQAQAQALA  84
            G  R G G + A  R   + + D     F      S+   RTS T AE+ AR AQAQ  A
Sbjct  73   GWPRLGFGVVTAPTR---WTLADGRELLF-----FSLPGPRTSGTAAERVARHAQAQTFA  124

Query  85   GDIRQRATQLIGVEHEVAAKIATATAPLNTVGFHEPP  121
            GDIRQRA QL+  E EVA+KI  ATA + T  F E P
Sbjct  125  GDIRQRAIQLVVSEQEVASKITAATAGIATTTFPETP  161


>gi|289749113|ref|ZP_06508491.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
 gi|289689700|gb|EFD57129.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
 gi|323720969|gb|EGB30034.1| hypothetical protein TMMG_03320 [Mycobacterium tuberculosis CDC1551A]
Length=266

 Score = 53.9 bits (128),  Expect = 4e-05, Method: Compositional matrix adjust.
 Identities = 44/97 (46%), Positives = 52/97 (54%), Gaps = 8/97 (8%)

Query  25   GLAREGAGTIGAAQRRVIYAVQDAHNAGFNVEEDLSVTDTRTSRTFAEQAARQAQAQALA  84
            G  R G G + A  R   + + D     F      S+   RTS T AE+ AR AQAQ  A
Sbjct  9    GWPRLGFGVVTAPTR---WTLADGRELLF-----FSLPGPRTSGTAAERVARHAQAQTFA  60

Query  85   GDIRQRATQLIGVEHEVAAKIATATAPLNTVGFHEPP  121
            GDIRQRA QL+  E EVA+KI  ATA + T  F E P
Sbjct  61   GDIRQRAIQLVVSEQEVASKITAATAGIATTTFPETP  97


>gi|326905163|gb|EGE52096.1| hypothetical protein TBPG_03095 [Mycobacterium tuberculosis W-148]
Length=346

 Score = 53.1 bits (126),  Expect = 6e-05, Method: Compositional matrix adjust.
 Identities = 44/97 (46%), Positives = 52/97 (54%), Gaps = 8/97 (8%)

Query  25   GLAREGAGTIGAAQRRVIYAVQDAHNAGFNVEEDLSVTDTRTSRTFAEQAARQAQAQALA  84
            G  R G G + A  R   + + D     F      S+   RTS T AE+ AR AQAQ  A
Sbjct  9    GWPRLGFGVVTAPTR---WTLADGRELLF-----FSLPGPRTSGTAAERVARHAQAQTFA  60

Query  85   GDIRQRATQLIGVEHEVAAKIATATAPLNTVGFHEPP  121
            GDIRQRA QL+  E EVA+KI  ATA + T  F E P
Sbjct  61   GDIRQRAIQLVVSEQEVASKITAATAGIATTTFPETP  97


>gi|148821816|ref|YP_001286570.1| hypothetical protein TBFG_10625 [Mycobacterium tuberculosis F11]
 gi|167969039|ref|ZP_02551316.1| hypothetical protein MtubH3_13837 [Mycobacterium tuberculosis 
H37Ra]
 gi|254230950|ref|ZP_04924277.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
 9 more sequence titles
 
gi|254549572|ref|ZP_05140019.1| hypothetical protein Mtube_03765 [Mycobacterium tuberculosis 
'98-R604 INH-RIF-EM']
 gi|289744328|ref|ZP_06503706.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
 gi|308396067|ref|ZP_07669358.1| hypothetical protein TMLG_03363 [Mycobacterium tuberculosis SUMu012]
 gi|124600009|gb|EAY59019.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
 gi|148720343|gb|ABR04968.1| conserved hypothetical protein [Mycobacterium tuberculosis F11]
 gi|289684856|gb|EFD52344.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
 gi|308367170|gb|EFP56021.1| hypothetical protein TMLG_03363 [Mycobacterium tuberculosis SUMu012]
 gi|339293653|gb|AEJ45764.1| hypothetical protein CCDC5079_0574 [Mycobacterium tuberculosis 
CCDC5079]
 gi|339297294|gb|AEJ49404.1| hypothetical protein CCDC5180_0567 [Mycobacterium tuberculosis 
CCDC5180]
Length=249

 Score = 52.8 bits (125),  Expect = 8e-05, Method: Compositional matrix adjust.
 Identities = 35/57 (62%), Positives = 39/57 (69%), Gaps = 0/57 (0%)

Query  65   RTSRTFAEQAARQAQAQALAGDIRQRATQLIGVEHEVAAKIATATAPLNTVGFHEPP  121
            RTS T AE+ AR AQAQ  AGDIRQRA QL+  E EVA+KI  ATA + T  F E P
Sbjct  24   RTSGTAAERVARHAQAQTFAGDIRQRAIQLVVSEQEVASKITAATAGIATTTFPETP  80



Lambda     K      H
   0.314    0.132    0.414 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 558531753480


  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
    Posted date:  Sep 5, 2011  4:36 AM
  Number of letters in database: 5,219,829,388
  Number of sequences in database:  15,229,318



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40