BLAST Search Results


BLASTP 2.2.25+


Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           15,229,318 sequences; 5,219,829,388 total letters



Query= Rv1959c

Length=98
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|15609096|ref|NP_216475.1|  hypothetical protein Rv1959c [Mycob...   202    1e-50
gi|289758067|ref|ZP_06517445.1|  hypothetical protein TBEG_00746 ...   176    1e-42
gi|296165357|ref|ZP_06847898.1|  DNA topoisomerase (ATP-hydrolyzi...   164    4e-39
gi|240171128|ref|ZP_04749787.1|  hypothetical protein MkanA1_1758...   147    6e-34
gi|323139775|ref|ZP_08074811.1|  plasmid stabilization system [Me...   120    5e-26
gi|154251167|ref|YP_001411991.1|  plasmid stabilization system pr...   111    4e-23
gi|326772354|ref|ZP_08231639.1|  plasmid stabilization protein Pa...   106    9e-22
gi|218529771|ref|YP_002420587.1|  plasmid stabilization system [M...   104    4e-21
gi|254560636|ref|YP_003067731.1|  hypothetical protein METDI2179 ...   103    9e-21
gi|163850944|ref|YP_001638987.1|  plasmid stabilization system pr...   102    2e-20
gi|334144674|ref|YP_004537830.1|  plasmid stabilization system [T...  94.4    5e-18
gi|218677949|ref|ZP_03525846.1|  plasmid stabilization system [Rh...  94.0    8e-18
gi|209552209|ref|YP_002284124.1|  plasmid stabilization system [R...  92.8    1e-17
gi|82703899|ref|YP_413464.1|  plasmid stabilization system protei...  92.4    2e-17
gi|164516392|emb|CAP48309.1|  putative integron gene cassette pro...  92.0    2e-17
gi|328542991|ref|YP_004303100.1|  DNA topoisomerase (ATP-hydrolyz...  90.5    7e-17
gi|189425641|ref|YP_001952818.1|  plasmid stabilization system pr...  89.4    2e-16
gi|221210055|ref|ZP_03583036.1|  plasmid stabilization system [Bu...  89.4    2e-16
gi|153830322|ref|ZP_01982989.1|  plasmid stabilization element Pa...  88.2    4e-16
gi|15601123|ref|NP_232754.1|  plasmid stabilization element ParE,...  88.2    4e-16
gi|297580493|ref|ZP_06942420.1|  conserved hypothetical protein [...  87.8    5e-16
gi|262275567|ref|ZP_06053376.1|  plasmid stabilization element Pa...  87.4    6e-16
gi|27365828|ref|NP_761356.1|  Plasmid stabilization element ParE ...  87.0    8e-16
gi|153803257|ref|ZP_01957843.1|  plasmid stabilization element Pa...  87.0    8e-16
gi|188584324|ref|YP_001927769.1|  plasmid stabilization system [M...  86.7    1e-15
gi|153215750|ref|ZP_01950119.1|  plasmid stabilization element Pa...  85.9    2e-15
gi|161520776|ref|YP_001584203.1|  plasmid stabilization system pr...  85.9    2e-15
gi|337266995|ref|YP_004611050.1|  plasmid stabilization system [M...  85.9    2e-15
gi|304313241|ref|YP_003812839.1|  Putative plasmid stabilization ...  85.1    3e-15
gi|115360825|ref|YP_777962.1|  plasmid stabilization system prote...  85.1    3e-15
gi|30250054|ref|NP_842124.1|  plasmid stabilization protein ParE ...  84.7    4e-15
gi|343503260|ref|ZP_08741086.1|  Plasmid stabilization element Pa...  84.3    5e-15
gi|222085620|ref|YP_002544150.1|  hypothetical protein Arad_1901 ...  84.3    6e-15
gi|170700269|ref|ZP_02891283.1|  plasmid stabilization system [Bu...  84.0    7e-15
gi|344199020|ref|YP_004783346.1|  plasmid stabilization system [A...  83.6    1e-14
gi|254285011|ref|ZP_04959977.1|  Plasmid stabilization system pro...  83.2    1e-14
gi|225873779|ref|YP_002755238.1|  plasmid stabilization system pr...  83.2    1e-14
gi|332140033|ref|YP_004425771.1|  putative plasmid stabilization ...  82.8    2e-14
gi|218709435|ref|YP_002417056.1|  putative addiction module toxin...  82.0    3e-14
gi|320156285|ref|YP_004188664.1|  plasmid stabilization element P...  82.0    3e-14
gi|89052515|ref|YP_507966.1|  plasmid stabilization system protei...  81.6    3e-14
gi|16125126|ref|NP_419690.1|  hypothetical protein CC_0873 [Caulo...  81.6    3e-14
gi|30248281|ref|NP_840351.1|  plasmid stabilization element ParE ...  81.3    4e-14
gi|336451956|ref|ZP_08622389.1|  plasmid stabilization system pro...  80.1    1e-13
gi|83956446|ref|ZP_00964867.1|  hypothetical protein NAS141_01051...  79.7    1e-13
gi|54302872|ref|YP_132865.1|  putative plasmid stabilization elem...  79.3    2e-13
gi|330962389|gb|EGH62649.1|  plasmid stabilization system [Pseudo...  79.3    2e-13
gi|126667004|ref|ZP_01737979.1|  Plasmid stabilization element Pa...  78.2    4e-13
gi|78357951|ref|YP_389400.1|  hypothetical protein Dde_2911 [Desu...  77.8    4e-13
gi|289526820|pdb|3KXE|A  Chain A, A Conserved Mode Of Protein Rec...  77.8    5e-13


>gi|15609096|ref|NP_216475.1| hypothetical protein Rv1959c [Mycobacterium tuberculosis H37Rv]
 gi|15841429|ref|NP_336466.1| hypothetical protein MT2008 [Mycobacterium tuberculosis CDC1551]
 gi|31793151|ref|NP_855644.1| hypothetical protein Mb1994c [Mycobacterium bovis AF2122/97]
 77 more sequence titles
 gi|121637864|ref|YP_978087.1| hypothetical protein BCG_1998c [Mycobacterium bovis BCG str. 
Pasteur 1173P2]
 gi|148661766|ref|YP_001283289.1| hypothetical protein MRA_1968 [Mycobacterium tuberculosis H37Ra]
 gi|148823170|ref|YP_001287924.1| hypothetical protein TBFG_11987 [Mycobacterium tuberculosis F11]
 gi|167970524|ref|ZP_02552801.1| hypothetical protein MtubH3_21823 [Mycobacterium tuberculosis 
H37Ra]
 gi|224990348|ref|YP_002645035.1| hypothetical protein JTY_1982 [Mycobacterium bovis BCG str. Tokyo 
172]
 gi|253798995|ref|YP_003031996.1| toxin [Mycobacterium tuberculosis KZN 1435]
 gi|254232128|ref|ZP_04925455.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
 gi|254364776|ref|ZP_04980822.1| conserved hypothetical protein [Mycobacterium tuberculosis str. 
Haarlem]
 gi|254550976|ref|ZP_05141423.1| toxin [Mycobacterium tuberculosis '98-R604 INH-RIF-EM']
 gi|289443440|ref|ZP_06433184.1| toxin [Mycobacterium tuberculosis T46]
 gi|289447574|ref|ZP_06437318.1| toxin [Mycobacterium tuberculosis CPHL_A]
 gi|289554266|ref|ZP_06443476.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
605]
 gi|289570046|ref|ZP_06450273.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
 gi|289574642|ref|ZP_06454869.1| toxin [Mycobacterium tuberculosis K85]
 gi|289746104|ref|ZP_06505482.1| plasmid stabilization protein ParE [Mycobacterium tuberculosis 
02_1987]
 gi|289750541|ref|ZP_06509919.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
 gi|289754055|ref|ZP_06513433.1| plasmid stabilization protein ParE [Mycobacterium tuberculosis 
EAS054]
 gi|289762112|ref|ZP_06521490.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 
1503]
 gi|294996878|ref|ZP_06802569.1| toxin [Mycobacterium tuberculosis 210]
 gi|297634525|ref|ZP_06952305.1| toxin [Mycobacterium tuberculosis KZN 4207]
 gi|297731513|ref|ZP_06960631.1| toxin [Mycobacterium tuberculosis KZN R506]
 gi|298525452|ref|ZP_07012861.1| plasmid stabilization system protein [Mycobacterium tuberculosis 
94_M4241A]
 gi|306776188|ref|ZP_07414525.1| toxin [Mycobacterium tuberculosis SUMu001]
 gi|306779970|ref|ZP_07418307.1| toxin [Mycobacterium tuberculosis SUMu002]
 gi|306784719|ref|ZP_07423041.1| toxin [Mycobacterium tuberculosis SUMu003]
 gi|306789076|ref|ZP_07427398.1| toxin [Mycobacterium tuberculosis SUMu004]
 gi|306793411|ref|ZP_07431713.1| toxin [Mycobacterium tuberculosis SUMu005]
 gi|306797794|ref|ZP_07436096.1| toxin [Mycobacterium tuberculosis SUMu006]
 gi|306803675|ref|ZP_07440343.1| toxin [Mycobacterium tuberculosis SUMu008]
 gi|306808249|ref|ZP_07444917.1| toxin [Mycobacterium tuberculosis SUMu007]
 gi|306968072|ref|ZP_07480733.1| toxin [Mycobacterium tuberculosis SUMu009]
 gi|306972297|ref|ZP_07484958.1| toxin [Mycobacterium tuberculosis SUMu010]
 gi|307080008|ref|ZP_07489178.1| toxin [Mycobacterium tuberculosis SUMu011]
 gi|307084582|ref|ZP_07493695.1| toxin [Mycobacterium tuberculosis SUMu012]
 gi|313658846|ref|ZP_07815726.1| toxin [Mycobacterium tuberculosis KZN V2475]
 gi|339632011|ref|YP_004723653.1| hypothetical protein MAF_19820 [Mycobacterium africanum GM041182]
 gi|340626968|ref|YP_004745420.1| hypothetical protein MCAN_19751 [Mycobacterium canettii CIPT 
140010059]
 gi|81671762|sp|P95255.2|PARE1_MYCTU RecName: Full=Toxin ParE1
 gi|1806203|emb|CAB06534.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium tuberculosis H37Rv]
 gi|13881667|gb|AAK46280.1| plasmid stabilization protein ParE [Mycobacterium tuberculosis 
CDC1551]
 gi|31618742|emb|CAD94696.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium bovis AF2122/97]
 gi|121493511|emb|CAL71985.1| Conserved hypothetical protein [Mycobacterium bovis BCG str. 
Pasteur 1173P2]
 gi|124601187|gb|EAY60197.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
 gi|134150290|gb|EBA42335.1| conserved hypothetical protein [Mycobacterium tuberculosis str. 
Haarlem]
 gi|148505918|gb|ABQ73727.1| conserved hypothetical protein [Mycobacterium tuberculosis H37Ra]
 gi|148721697|gb|ABR06322.1| conserved hypothetical protein [Mycobacterium tuberculosis F11]
 gi|224773461|dbj|BAH26267.1| hypothetical protein JTY_1982 [Mycobacterium bovis BCG str. Tokyo 
172]
 gi|253320498|gb|ACT25101.1| toxin [Mycobacterium tuberculosis KZN 1435]
 gi|289416359|gb|EFD13599.1| toxin [Mycobacterium tuberculosis T46]
 gi|289420532|gb|EFD17733.1| toxin [Mycobacterium tuberculosis CPHL_A]
 gi|289438898|gb|EFD21391.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
605]
 gi|289539073|gb|EFD43651.1| toxin [Mycobacterium tuberculosis K85]
 gi|289543800|gb|EFD47448.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
 gi|289686632|gb|EFD54120.1| plasmid stabilization protein ParE [Mycobacterium tuberculosis 
02_1987]
 gi|289691128|gb|EFD58557.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
 gi|289694642|gb|EFD62071.1| plasmid stabilization protein ParE [Mycobacterium tuberculosis 
EAS054]
 gi|289709618|gb|EFD73634.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 
1503]
 gi|298495246|gb|EFI30540.1| plasmid stabilization system protein [Mycobacterium tuberculosis 
94_M4241A]
 gi|308215370|gb|EFO74769.1| toxin [Mycobacterium tuberculosis SUMu001]
 gi|308327125|gb|EFP15976.1| toxin [Mycobacterium tuberculosis SUMu002]
 gi|308330561|gb|EFP19412.1| toxin [Mycobacterium tuberculosis SUMu003]
 gi|308334395|gb|EFP23246.1| toxin [Mycobacterium tuberculosis SUMu004]
 gi|308338191|gb|EFP27042.1| toxin [Mycobacterium tuberculosis SUMu005]
 gi|308341886|gb|EFP30737.1| toxin [Mycobacterium tuberculosis SUMu006]
 gi|308345375|gb|EFP34226.1| toxin [Mycobacterium tuberculosis SUMu007]
 gi|308349678|gb|EFP38529.1| toxin [Mycobacterium tuberculosis SUMu008]
 gi|308354308|gb|EFP43159.1| toxin [Mycobacterium tuberculosis SUMu009]
 gi|308358250|gb|EFP47101.1| toxin [Mycobacterium tuberculosis SUMu010]
 gi|308362178|gb|EFP51029.1| toxin [Mycobacterium tuberculosis SUMu011]
 gi|308365834|gb|EFP54685.1| toxin [Mycobacterium tuberculosis SUMu012]
 gi|323719523|gb|EGB28649.1| toxin protein [Mycobacterium tuberculosis CDC1551A]
 gi|326903565|gb|EGE50498.1| toxin [Mycobacterium tuberculosis W-148]
 gi|328458750|gb|AEB04173.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
4207]
 gi|339331367|emb|CCC27052.1| conserved hypothetical protein [Mycobacterium africanum GM041182]
 gi|340005158|emb|CCC44307.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059]
 gi|341601891|emb|CCC64565.1| conserved hypothetical protein [Mycobacterium bovis BCG str. 
Moreau RDJ]
 gi|344219781|gb|AEN00412.1| hypothetical protein MTCTRI2_1992 [Mycobacterium tuberculosis 
CTRI-2]
Length=98

 Score =  202 bits (515),  Expect = 1e-50, Method: Compositional matrix adjust.
 Identities = 97/98 (99%), Positives = 98/98 (100%), Gaps = 0/98 (0%)

Query  1   VSSRYLLSPAAQAHLEEIWDCTYDRWGVDQAEQYLRELQHAIDRAAANPRIGRACDEIRP  60
           +SSRYLLSPAAQAHLEEIWDCTYDRWGVDQAEQYLRELQHAIDRAAANPRIGRACDEIRP
Sbjct  1   MSSRYLLSPAAQAHLEEIWDCTYDRWGVDQAEQYLRELQHAIDRAAANPRIGRACDEIRP  60

Query  61  GYRKLSAGSHTLFYRVTGEGTIDVVRVLHQRMDVDRNL  98
           GYRKLSAGSHTLFYRVTGEGTIDVVRVLHQRMDVDRNL
Sbjct  61  GYRKLSAGSHTLFYRVTGEGTIDVVRVLHQRMDVDRNL  98


>gi|289758067|ref|ZP_06517445.1| hypothetical protein TBEG_00746 [Mycobacterium tuberculosis T85]
 gi|289713631|gb|EFD77643.1| hypothetical protein TBEG_00746 [Mycobacterium tuberculosis T85]
Length=84

 Score =  176 bits (445),  Expect = 1e-42, Method: Compositional matrix adjust.
 Identities = 83/84 (99%), Positives = 84/84 (100%), Gaps = 0/84 (0%)

Query  15  LEEIWDCTYDRWGVDQAEQYLRELQHAIDRAAANPRIGRACDEIRPGYRKLSAGSHTLFY  74
           +EEIWDCTYDRWGVDQAEQYLRELQHAIDRAAANPRIGRACDEIRPGYRKLSAGSHTLFY
Sbjct  1   MEEIWDCTYDRWGVDQAEQYLRELQHAIDRAAANPRIGRACDEIRPGYRKLSAGSHTLFY  60

Query  75  RVTGEGTIDVVRVLHQRMDVDRNL  98
           RVTGEGTIDVVRVLHQRMDVDRNL
Sbjct  61  RVTGEGTIDVVRVLHQRMDVDRNL  84


>gi|296165357|ref|ZP_06847898.1| DNA topoisomerase (ATP-hydrolyzing) ParE [Mycobacterium parascrofulaceum 
ATCC BAA-614]
 gi|295899248|gb|EFG78713.1| DNA topoisomerase (ATP-hydrolyzing) ParE [Mycobacterium parascrofulaceum 
ATCC BAA-614]
Length=97

 Score =  164 bits (415),  Expect = 4e-39, Method: Compositional matrix adjust.
 Identities = 78/96 (82%), Positives = 88/96 (92%), Gaps = 0/96 (0%)

Query  3   SRYLLSPAAQAHLEEIWDCTYDRWGVDQAEQYLRELQHAIDRAAANPRIGRACDEIRPGY  62
           S Y+LSPAAQA LE+IWD T++ WG+DQAEQYLRELQ AI+RAAANPRIGRACDEIRPGY
Sbjct  2   SAYVLSPAAQADLEQIWDYTHEHWGLDQAEQYLRELQRAIERAAANPRIGRACDEIRPGY  61

Query  63  RKLSAGSHTLFYRVTGEGTIDVVRVLHQRMDVDRNL  98
           RKL+AGSH LFYRVT +G +DVVRVLHQRMDVDR+L
Sbjct  62  RKLAAGSHMLFYRVTTQGFLDVVRVLHQRMDVDRHL  97


>gi|240171128|ref|ZP_04749787.1| hypothetical protein MkanA1_17586 [Mycobacterium kansasii ATCC 
12478]
Length=84

 Score =  147 bits (371),  Expect = 6e-34, Method: Compositional matrix adjust.
 Identities = 68/84 (81%), Positives = 78/84 (93%), Gaps = 0/84 (0%)

Query  15  LEEIWDCTYDRWGVDQAEQYLRELQHAIDRAAANPRIGRACDEIRPGYRKLSAGSHTLFY  74
           +E+IWD T++ WG+DQAEQYLRELQ AI+RAAANPRIGRACDEIRPGYRKL+AGSH LFY
Sbjct  1   MEQIWDYTHEHWGLDQAEQYLRELQRAIERAAANPRIGRACDEIRPGYRKLAAGSHMLFY  60

Query  75  RVTGEGTIDVVRVLHQRMDVDRNL  98
           RVT +G +DVVRVLHQRMDVDR+L
Sbjct  61  RVTTQGFLDVVRVLHQRMDVDRHL  84


>gi|323139775|ref|ZP_08074811.1| plasmid stabilization system [Methylocystis sp. ATCC 49242]
 gi|322394979|gb|EFX97544.1| plasmid stabilization system [Methylocystis sp. ATCC 49242]
Length=96

 Score =  120 bits (302),  Expect = 5e-26, Method: Compositional matrix adjust.
 Identities = 57/96 (60%), Positives = 73/96 (77%), Gaps = 1/96 (1%)

Query  3   SRYLLSPAAQAHLEEIWDCTYDRWGVDQAEQYLRELQHAIDRAAANPRIGRACDEIRPGY  62
            R+ LSP AQA +EEIWD T + W V QAE YLR+++ A++  A +PR+GR CDE+R GY
Sbjct  2   KRFTLSPRAQADIEEIWDYTVEHWNVGQAEVYLRKIKAAVEAVADDPRLGRPCDEVRAGY  61

Query  63  RKLSAGSHTLFYRVTGEGTIDVVRVLHQRMDVDRNL  98
           RK  AGSH LFYR T +G ID+VR+LHQRMD +R+L
Sbjct  62  RKYPAGSHILFYRPTPDG-IDIVRILHQRMDFERHL  96


>gi|154251167|ref|YP_001411991.1| plasmid stabilization system protein [Parvibaculum lavamentivorans 
DS-1]
 gi|154155117|gb|ABS62334.1| plasmid stabilization system [Parvibaculum lavamentivorans DS-1]
Length=100

 Score =  111 bits (277),  Expect = 4e-23, Method: Compositional matrix adjust.
 Identities = 51/96 (54%), Positives = 70/96 (73%), Gaps = 0/96 (0%)

Query  3   SRYLLSPAAQAHLEEIWDCTYDRWGVDQAEQYLRELQHAIDRAAANPRIGRACDEIRPGY  62
           S Y+ SPAA+A LEEIW+ + ++WG ++AE Y+ +++ A +  A   + GRA D IRPGY
Sbjct  2   SAYVFSPAARADLEEIWNYSVEQWGAERAETYILQIRDACEALAGGKKKGRAIDGIRPGY  61

Query  63  RKLSAGSHTLFYRVTGEGTIDVVRVLHQRMDVDRNL  98
            KL+AGSH LF+R+   G IDVVR+LHQRMDV  +L
Sbjct  62  LKLAAGSHFLFFRIGNGGVIDVVRILHQRMDVSAHL  97


>gi|326772354|ref|ZP_08231639.1| plasmid stabilization protein ParE [Actinomyces viscosus C505]
 gi|326638487|gb|EGE39388.1| plasmid stabilization protein ParE [Actinomyces viscosus C505]
Length=96

 Score =  106 bits (265),  Expect = 9e-22, Method: Compositional matrix adjust.
 Identities = 52/96 (55%), Positives = 69/96 (72%), Gaps = 1/96 (1%)

Query  3   SRYLLSPAAQAHLEEIWDCTYDRWGVDQAEQYLRELQHAIDRAAANPRIGRACDEIRPGY  62
           S Y L+PAA+  L  IWD + +RWG+ QAE YLR+LQ  ++R A +PR G   DE+RPGY
Sbjct  2   STYRLTPAARRDLSRIWDYSEERWGLQQAEVYLRDLQTCLERLADDPRRGHPRDEVRPGY  61

Query  63  RKLSAGSHTLFYRVTGEGTIDVVRVLHQRMDVDRNL  98
           R  + GSH +FY V  +G +DV+RVLHQRMD DR++
Sbjct  62  RSRAVGSHVVFY-VISDGGVDVIRVLHQRMDPDRHV  96


>gi|218529771|ref|YP_002420587.1| plasmid stabilization system [Methylobacterium chloromethanicum 
CM4]
 gi|218522074|gb|ACK82659.1| plasmid stabilization system [Methylobacterium chloromethanicum 
CM4]
Length=96

 Score =  104 bits (259),  Expect = 4e-21, Method: Compositional matrix adjust.
 Identities = 50/92 (55%), Positives = 63/92 (69%), Gaps = 0/92 (0%)

Query  7   LSPAAQAHLEEIWDCTYDRWGVDQAEQYLRELQHAIDRAAANPRIGRACDEIRPGYRKLS  66
           LSP A+A L  IWD + +RWG DQA++Y+R L    DR A +P  G   DEIR GY +LS
Sbjct  5   LSPRARADLSRIWDDSAERWGADQADRYIRLLAGGFDRLAEDPARGLRADEIRKGYFRLS  64

Query  67  AGSHTLFYRVTGEGTIDVVRVLHQRMDVDRNL  98
            GSH LFYR+  EG I+V+R+LH RMD  R+L
Sbjct  65  VGSHILFYRLGAEGGIEVIRILHGRMDFKRHL  96


>gi|254560636|ref|YP_003067731.1| hypothetical protein METDI2179 [Methylobacterium extorquens DM4]
 gi|254267914|emb|CAX23780.1| conserved hypothetical protein [Methylobacterium extorquens DM4]
Length=96

 Score =  103 bits (257),  Expect = 9e-21, Method: Compositional matrix adjust.
 Identities = 49/92 (54%), Positives = 62/92 (68%), Gaps = 0/92 (0%)

Query  7   LSPAAQAHLEEIWDCTYDRWGVDQAEQYLRELQHAIDRAAANPRIGRACDEIRPGYRKLS  66
           LSP A+A L  IWD + +RWG DQA++Y+R L    DR A +P  G   DEIR GY +LS
Sbjct  5   LSPRARADLSRIWDDSAERWGADQADRYIRLLAGGFDRLAEDPARGLRADEIRKGYFRLS  64

Query  67  AGSHTLFYRVTGEGTIDVVRVLHQRMDVDRNL  98
            GSH LFYR+  EG I+V+R+LH RMD  R+ 
Sbjct  65  VGSHVLFYRLGAEGGIEVIRILHGRMDFKRHF  96


>gi|163850944|ref|YP_001638987.1| plasmid stabilization system protein [Methylobacterium extorquens 
PA1]
 gi|163662549|gb|ABY29916.1| plasmid stabilization system [Methylobacterium extorquens PA1]
Length=96

 Score =  102 bits (254),  Expect = 2e-20, Method: Compositional matrix adjust.
 Identities = 49/92 (54%), Positives = 61/92 (67%), Gaps = 0/92 (0%)

Query  7   LSPAAQAHLEEIWDCTYDRWGVDQAEQYLRELQHAIDRAAANPRIGRACDEIRPGYRKLS  66
           LSP A+A L  IWD + +RWG DQA+ Y+R L    DR A +P  G   DEIR GY +LS
Sbjct  5   LSPRARADLSRIWDDSAERWGADQADCYIRLLAGGFDRLAEDPARGLGADEIRKGYFRLS  64

Query  67  AGSHTLFYRVTGEGTIDVVRVLHQRMDVDRNL  98
            GSH LFYR+  EG I+V+R+LH RMD  R+ 
Sbjct  65  VGSHILFYRLGAEGGIEVIRILHGRMDFKRHF  96


>gi|334144674|ref|YP_004537830.1| plasmid stabilization system [Thioalkalimicrobium cyclicum ALM1]
 gi|333965585|gb|AEG32351.1| plasmid stabilization system [Thioalkalimicrobium cyclicum ALM1]
Length=99

 Score = 94.4 bits (233),  Expect = 5e-18, Method: Compositional matrix adjust.
 Identities = 42/92 (46%), Positives = 61/92 (67%), Gaps = 1/92 (1%)

Query  7   LSPAAQAHLEEIWDCTYDRWGVDQAEQYLRELQHAIDRAAANPRIGRACDEIRPGYRKLS  66
           LSP AQ  L  IWD TY +WG  QAE Y+R + HAI+   ++    ++ D +R GYRK+ 
Sbjct  5   LSPKAQEDLSYIWDYTYHQWGTMQAETYVRNIWHAIESLKSSYNSSQSIDFVRAGYRKIQ  64

Query  67  AGSHTLFYRVTGEGTIDVVRVLHQRMDVDRNL  98
            GSH +F++   + TI V+R+LHQ+MD+ R+L
Sbjct  65  TGSHVIFFKQASD-TITVIRILHQQMDISRHL  95


>gi|218677949|ref|ZP_03525846.1| plasmid stabilization system [Rhizobium etli CIAT 894]
Length=96

 Score = 94.0 bits (232),  Expect = 8e-18, Method: Compositional matrix adjust.
 Identities = 45/93 (49%), Positives = 63/93 (68%), Gaps = 1/93 (1%)

Query  6   LLSPAAQAHLEEIWDCTYDRWGVDQAEQYLRELQHAIDRAAANPRIGRACDEIRPGYRKL  65
           + SPAAQ  +++IWD T   W VDQAE+Y+++++ A    A   R+ R  D IR GYRK+
Sbjct  5   IFSPAAQTDIDKIWDYTATSWNVDQAERYIQDIRDACHELAEGTRMSRPSD-IRKGYRKV  63

Query  66  SAGSHTLFYRVTGEGTIDVVRVLHQRMDVDRNL  98
           S GSH L+++    G I VVR+LHQRMDV ++L
Sbjct  64  SVGSHFLYFKSNDAGQIIVVRILHQRMDVAKHL  96


>gi|209552209|ref|YP_002284124.1| plasmid stabilization system [Rhizobium leguminosarum bv. trifolii 
WSM2304]
 gi|209539321|gb|ACI59253.1| plasmid stabilization system [Rhizobium leguminosarum bv. trifolii 
WSM2304]
Length=96

 Score = 92.8 bits (229),  Expect = 1e-17, Method: Compositional matrix adjust.
 Identities = 45/93 (49%), Positives = 62/93 (67%), Gaps = 1/93 (1%)

Query  6   LLSPAAQAHLEEIWDCTYDRWGVDQAEQYLRELQHAIDRAAANPRIGRACDEIRPGYRKL  65
           + SPAAQ  ++ IWD T   W VDQAE+Y+++++ A    A   R+ R  D IR GYRK+
Sbjct  5   IFSPAAQTDIDRIWDYTATSWNVDQAERYIQDIRDACHELAQGTRMSRPSD-IRKGYRKV  63

Query  66  SAGSHTLFYRVTGEGTIDVVRVLHQRMDVDRNL  98
           S GSH L+++    G I VVR+LHQRMDV ++L
Sbjct  64  SVGSHFLYFKSNDAGQIIVVRILHQRMDVAKHL  96


>gi|82703899|ref|YP_413464.1| plasmid stabilization system protein [Nitrosospira multiformis 
ATCC 25196]
 gi|82411964|gb|ABB76072.1| Plasmid stabilization system [Nitrosospira multiformis ATCC 25196]
Length=114

 Score = 92.4 bits (228),  Expect = 2e-17, Method: Compositional matrix adjust.
 Identities = 43/96 (45%), Positives = 62/96 (65%), Gaps = 1/96 (1%)

Query  3   SRYLLSPAAQAHLEEIWDCTYDRWGVDQAEQYLRELQHAIDRAAANPRIGRACDEIRPGY  62
            RY+LSPAA+  +  I   T  +WG  QA++Y  EL+  +   A NP +GRA DE++ GY
Sbjct  2   KRYILSPAAKTDITNIRKYTIQKWGKSQADKYTLELRERMRWLADNPMLGRARDEVKEGY  61

Query  63  RKLSAGSHTLFYRVTGEGTIDVVRVLHQRMDVDRNL  98
           R    GSH +FYRV  E TI+++ + HQ MD+++NL
Sbjct  62  RSFKEGSHIIFYRVV-ESTIEIIGIPHQNMDIEQNL  96


>gi|164516392|emb|CAP48309.1| putative integron gene cassette protein [uncultured bacterium]
Length=99

 Score = 92.0 bits (227),  Expect = 2e-17, Method: Compositional matrix adjust.
 Identities = 45/93 (49%), Positives = 57/93 (62%), Gaps = 0/93 (0%)

Query  3   SRYLLSPAAQAHLEEIWDCTYDRWGVDQAEQYLRELQHAIDRAAANPRIGRACDEIRPGY  62
           S + L+ +AQA L+ I   T +RWG+ Q   YLRE+       A NP +GRACDE+R GY
Sbjct  2   SSFELTKSAQADLKSIAKFTQERWGLRQRNTYLREIDQVFRALAKNPVMGRACDEVREGY  61

Query  63  RKLSAGSHTLFYRVTGEGTIDVVRVLHQRMDVD  95
           RK   GSH ++YR      + VVRVLH  MDVD
Sbjct  62  RKFPHGSHVIYYRQDDTDLLLVVRVLHMTMDVD  94


>gi|328542991|ref|YP_004303100.1| DNA topoisomerase (ATP-hydrolyzing) ParE [Polymorphum gilvum 
SL003B-26A1]
 gi|326412737|gb|ADZ69800.1| DNA topoisomerase (ATP-hydrolyzing) ParE [Polymorphum gilvum 
SL003B-26A1]
Length=96

 Score = 90.5 bits (223),  Expect = 7e-17, Method: Compositional matrix adjust.
 Identities = 46/95 (49%), Positives = 62/95 (66%), Gaps = 1/95 (1%)

Query  4   RYLLSPAAQAHLEEIWDCTYDRWGVDQAEQYLRELQHAIDRAAANPRIGRACDEIRPGYR  63
           R   SPAA+A L+ IW  T  +WG  QA +Y R++Q      A+    GR+ D++RPGY 
Sbjct  3   RIQFSPAAEADLDAIWAYTLGQWGEAQAIRYFRDMQATCAGLASGTLSGRSVDDVRPGYF  62

Query  64  KLSAGSHTLFYRVTGEGTIDVVRVLHQRMDVDRNL  98
           K + G+H LFYR+T E  + V+RVLHQRMDV R+L
Sbjct  63  KAAFGAHLLFYRLTEEALV-VIRVLHQRMDVARHL  96


>gi|189425641|ref|YP_001952818.1| plasmid stabilization system protein [Geobacter lovleyi SZ]
 gi|189421900|gb|ACD96298.1| plasmid stabilization system [Geobacter lovleyi SZ]
Length=100

 Score = 89.4 bits (220),  Expect = 2e-16, Method: Compositional matrix adjust.
 Identities = 44/94 (47%), Positives = 61/94 (65%), Gaps = 0/94 (0%)

Query  5   YLLSPAAQAHLEEIWDCTYDRWGVDQAEQYLRELQHAIDRAAANPRIGRACDEIRPGYRK  64
           + L+  A+A L+EI   T +RWG +Q + YL+ L  +  + A NP  G+ C +IR GYRK
Sbjct  4   FTLTNMAKADLKEIAKFTQNRWGREQRDLYLQMLDVSFRQLAVNPLKGKDCSDIRIGYRK  63

Query  65  LSAGSHTLFYRVTGEGTIDVVRVLHQRMDVDRNL  98
           L AGSH +FYR T   TI++VRVLH  MD++  L
Sbjct  64  LLAGSHVIFYRQTLTDTIEIVRVLHGHMDIETRL  97


>gi|221210055|ref|ZP_03583036.1| plasmid stabilization system [Burkholderia multivorans CGD1]
 gi|221170743|gb|EEE03209.1| plasmid stabilization system [Burkholderia multivorans CGD1]
Length=99

 Score = 89.4 bits (220),  Expect = 2e-16, Method: Compositional matrix adjust.
 Identities = 49/94 (53%), Positives = 62/94 (66%), Gaps = 6/94 (6%)

Query  7   LSPAAQAHLEEIWDCTYDRWGVDQAEQYLRELQHAIDRAAANPRIGRACDEIRPG--YRK  64
           L+P A+A LE IW  TY+RW +DQAE+Y+ EL  A +R A    +G      R G  Y +
Sbjct  10  LTPLAEADLEAIWSYTYERWSLDQAERYIGELSAAFERLARRESVGWPS---RAGGNYSR  66

Query  65  LSAGSHTLFYRVTGEGTIDVVRVLHQRMDVDRNL  98
              GSH +FYR T E T+DV+RVLHQRMDVDR+L
Sbjct  67  YLVGSHVVFYRETTE-TLDVIRVLHQRMDVDRHL  99


>gi|153830322|ref|ZP_01982989.1| plasmid stabilization element ParE [Vibrio cholerae 623-39]
 gi|153831464|ref|ZP_01984131.1| putative plasmid stabilization element ParE [Vibrio cholerae 
623-39]
 gi|148873055|gb|EDL71190.1| putative plasmid stabilization element ParE [Vibrio cholerae 
623-39]
 gi|148874220|gb|EDL72355.1| plasmid stabilization element ParE [Vibrio cholerae 623-39]
Length=99

 Score = 88.2 bits (217),  Expect = 4e-16, Method: Compositional matrix adjust.
 Identities = 42/91 (47%), Positives = 58/91 (64%), Gaps = 0/91 (0%)

Query  5   YLLSPAAQAHLEEIWDCTYDRWGVDQAEQYLRELQHAIDRAAANPRIGRACDEIRPGYRK  64
           + L+ AA+A L +I   T  RWG +Q   YL++   +    A NP IG++CDEIR GYRK
Sbjct  4   FNLTVAAKADLRDIALFTQRRWGKEQRNVYLKQFDDSFWLLAENPDIGKSCDEIREGYRK  63

Query  65  LSAGSHTLFYRVTGEGTIDVVRVLHQRMDVD  95
            S GSH +FY+  G   I V+R+LH+ MDV+
Sbjct  64  FSQGSHVIFYQQIGSQQIRVIRILHKSMDVN  94


>gi|15601123|ref|NP_232754.1| plasmid stabilization element ParE, putative [Vibrio cholerae 
O1 biovar eltor str. N16961]
 gi|121726184|ref|ZP_01679482.1| plasmid stabilization element ParE, putative [Vibrio cholerae 
V52]
 gi|147671435|ref|YP_001215736.1| putative plasmid stabilization element ParE [Vibrio cholerae 
O395]
 42 more sequence titles
 gi|153819980|ref|ZP_01972647.1| plasmid stabilization element ParE, putative [Vibrio cholerae 
NCTC 8457]
 gi|153828459|ref|ZP_01981126.1| putative plasmid stabilization element ParE [Vibrio cholerae 
623-39]
 gi|227811934|ref|YP_002811944.1| putative plasmid stabilization element ParE [Vibrio cholerae 
M66-2]
 gi|229506459|ref|ZP_04395968.1| hypothetical protein VCF_001676 [Vibrio cholerae BX 330286]
 gi|229509458|ref|ZP_04398940.1| hypothetical protein VCE_000858 [Vibrio cholerae B33]
 gi|229514815|ref|ZP_04404276.1| hypothetical protein VCB_002467 [Vibrio cholerae TMA 21]
 gi|229516745|ref|ZP_04406192.1| hypothetical protein VCC_000763 [Vibrio cholerae RC9]
 gi|229526027|ref|ZP_04415431.1| hypothetical protein VCA_000134 [Vibrio cholerae bv. albensis 
VL426]
 gi|229526086|ref|ZP_04415490.1| hypothetical protein VCA_000194 [Vibrio cholerae bv. albensis 
VL426]
 gi|229527723|ref|ZP_04417114.1| hypothetical protein VCG_000795 [Vibrio cholerae 12129(1)]
 gi|229605975|ref|YP_002876679.1| hypothetical protein VCD_000924 [Vibrio cholerae MJ-1236]
 gi|254850477|ref|ZP_05239827.1| plasmid stabilization element ParE [Vibrio cholerae MO10]
 gi|255745865|ref|ZP_05419812.1| plasmid stabilization element ParE putative [Vibrio cholera CIRS 
101]
 gi|262151121|ref|ZP_06028261.1| plasmid stabilization element ParE putative [Vibrio cholerae 
INDRE 91/1]
 gi|262168182|ref|ZP_06035880.1| plasmid stabilization element ParE putative [Vibrio cholerae 
RC27]
 gi|298499153|ref|ZP_07008959.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
 gi|9657759|gb|AAF96266.1| plasmid stabilization element ParE, putative [Vibrio cholerae 
O1 biovar El Tor str. N16961]
 gi|121631403|gb|EAX63775.1| plasmid stabilization element ParE, putative [Vibrio cholerae 
V52]
 gi|126509477|gb|EAZ72071.1| plasmid stabilization element ParE, putative [Vibrio cholerae 
NCTC 8457]
 gi|146313818|gb|ABQ18358.1| putative plasmid stabilization element ParE [Vibrio cholerae 
O395]
 gi|148876010|gb|EDL74145.1| putative plasmid stabilization element ParE [Vibrio cholerae 
623-39]
 gi|227011076|gb|ACP07287.1| putative plasmid stabilization element ParE [Vibrio cholerae 
M66-2]
 gi|227015000|gb|ACP11209.1| plasmid stabilization element ParE, putative [Vibrio cholerae 
O395]
 gi|229334085|gb|EEN99570.1| hypothetical protein VCG_000795 [Vibrio cholerae 12129(1)]
 gi|229336185|gb|EEO01203.1| hypothetical protein VCA_000134 [Vibrio cholerae bv. albensis 
VL426]
 gi|229336244|gb|EEO01262.1| hypothetical protein VCA_000194 [Vibrio cholerae bv. albensis 
VL426]
 gi|229346626|gb|EEO11597.1| hypothetical protein VCC_000763 [Vibrio cholerae RC9]
 gi|229348795|gb|EEO13753.1| hypothetical protein VCB_002467 [Vibrio cholerae TMA 21]
 gi|229353408|gb|EEO18346.1| hypothetical protein VCE_000858 [Vibrio cholerae B33]
 gi|229356810|gb|EEO21728.1| hypothetical protein VCF_001676 [Vibrio cholerae BX 330286]
 gi|229372461|gb|ACQ62883.1| hypothetical protein VCD_000924 [Vibrio cholerae MJ-1236]
 gi|254846182|gb|EET24596.1| plasmid stabilization element ParE [Vibrio cholerae MO10]
 gi|255735619|gb|EET91017.1| plasmid stabilization element ParE putative [Vibrio cholera CIRS 
101]
 gi|262023425|gb|EEY42128.1| plasmid stabilization element ParE putative [Vibrio cholerae 
RC27]
 gi|262031092|gb|EEY49716.1| plasmid stabilization element ParE putative [Vibrio cholerae 
INDRE 91/1]
 gi|297541134|gb|EFH77185.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
 gi|327485503|gb|AEA79909.1| Plasmid stabilization element ParE, putative [Vibrio cholerae 
LMA3894-4]
 gi|340035009|gb|EGQ95995.1| plasmid stabilization system family protein [Vibrio cholerae 
HE39]
 gi|341630344|gb|EGS55413.1| plasmid stabilization system family protein [Vibrio cholerae 
HC-48A1]
 gi|341630386|gb|EGS55446.1| plasmid stabilization system family protein [Vibrio cholerae 
HC-40A1]
 gi|341633363|gb|EGS58177.1| plasmid stabilization system family protein [Vibrio cholerae 
HC-02A1]
 gi|341644267|gb|EGS68496.1| plasmid stabilization system family protein [Vibrio cholerae 
HC-38A1]
Length=99

 Score = 88.2 bits (217),  Expect = 4e-16, Method: Compositional matrix adjust.
 Identities = 42/91 (47%), Positives = 58/91 (64%), Gaps = 0/91 (0%)

Query  5   YLLSPAAQAHLEEIWDCTYDRWGVDQAEQYLRELQHAIDRAAANPRIGRACDEIRPGYRK  64
           + L+ AA+A L +I   T  RWG +Q   YL++   +    A NP IG++CDEIR GYRK
Sbjct  4   FNLTVAAKADLRDIALFTQRRWGKEQRNVYLKQFDDSFWLLAENPDIGKSCDEIREGYRK  63

Query  65  LSAGSHTLFYRVTGEGTIDVVRVLHQRMDVD  95
              GSH +FY+ TG   I V+R+LH+ MDV+
Sbjct  64  FPQGSHVIFYQQTGSQQIRVIRILHKSMDVN  94


>gi|297580493|ref|ZP_06942420.1| conserved hypothetical protein [Vibrio cholerae RC385]
 gi|297536139|gb|EFH74973.1| conserved hypothetical protein [Vibrio cholerae RC385]
Length=99

 Score = 87.8 bits (216),  Expect = 5e-16, Method: Compositional matrix adjust.
 Identities = 42/91 (47%), Positives = 58/91 (64%), Gaps = 0/91 (0%)

Query  5   YLLSPAAQAHLEEIWDCTYDRWGVDQAEQYLRELQHAIDRAAANPRIGRACDEIRPGYRK  64
           + L+ AA+A L +I   T  RWG +Q   YL++   +    A NP IG++CDEIR GYRK
Sbjct  4   FNLTVAAKADLRDIALFTQRRWGKEQLNVYLKQFDDSFWLLAENPDIGKSCDEIREGYRK  63

Query  65  LSAGSHTLFYRVTGEGTIDVVRVLHQRMDVD  95
              GSH +FY+ TG   I V+R+LH+ MDV+
Sbjct  64  FPQGSHFIFYQQTGSQQIRVIRILHKSMDVN  94


>gi|262275567|ref|ZP_06053376.1| plasmid stabilization element ParE putative [Grimontia hollisae 
CIP 101886]
 gi|262219375|gb|EEY70691.1| plasmid stabilization element ParE putative [Grimontia hollisae 
CIP 101886]
Length=99

 Score = 87.4 bits (215),  Expect = 6e-16, Method: Compositional matrix adjust.
 Identities = 42/91 (47%), Positives = 57/91 (63%), Gaps = 0/91 (0%)

Query  5   YLLSPAAQAHLEEIWDCTYDRWGVDQAEQYLRELQHAIDRAAANPRIGRACDEIRPGYRK  64
           + L+ AA+  L +I   T  RWG +Q   YL++   +    A NP IG++CDEIR GYRK
Sbjct  4   FNLTVAAKTDLRDIALFTQRRWGKEQRNVYLKQFDDSFWLLAENPDIGKSCDEIREGYRK  63

Query  65  LSAGSHTLFYRVTGEGTIDVVRVLHQRMDVD  95
            S GSH +FY  TG   I V+R+LH+ MDV+
Sbjct  64  FSQGSHVIFYLQTGRQQIRVIRILHKSMDVN  94


>gi|27365828|ref|NP_761356.1| Plasmid stabilization element ParE [Vibrio vulnificus CMCP6]
 gi|229523008|ref|ZP_04412420.1| plasmid stabilization element ParE [Vibrio cholerae TM 11079-80]
 gi|27361977|gb|AAO10883.1| Plasmid stabilization element ParE, putative [Vibrio vulnificus 
CMCP6]
 gi|126466791|gb|ABO14175.1| ParE1 [Vibrio vulnificus]
 gi|126466806|gb|ABO14185.1| ParE1 [Vibrio vulnificus]
 gi|229339858|gb|EEO04868.1| plasmid stabilization element ParE [Vibrio cholerae TM 11079-80]
Length=99

 Score = 87.0 bits (214),  Expect = 8e-16, Method: Compositional matrix adjust.
 Identities = 40/91 (44%), Positives = 57/91 (63%), Gaps = 0/91 (0%)

Query  5   YLLSPAAQAHLEEIWDCTYDRWGVDQAEQYLRELQHAIDRAAANPRIGRACDEIRPGYRK  64
           + L+  A++ L +I   T  RWG +Q   YL++   +    A NP IG+ACDEIR GYRK
Sbjct  4   FQLTNKAKSDLRDIALFTSRRWGREQRNIYLKQFDDSFWLLAENPDIGKACDEIRDGYRK  63

Query  65  LSAGSHTLFYRVTGEGTIDVVRVLHQRMDVD  95
              GSH +FYR  G   I+++R+LH+ MDV+
Sbjct  64  FPQGSHVIFYRQIGSQNIEIIRILHKSMDVN  94


>gi|153803257|ref|ZP_01957843.1| plasmid stabilization element ParE, putative [Vibrio cholerae 
MZO-3]
 gi|124121197|gb|EAY39940.1| plasmid stabilization element ParE, putative [Vibrio cholerae 
MZO-3]
Length=99

 Score = 87.0 bits (214),  Expect = 8e-16, Method: Compositional matrix adjust.
 Identities = 41/91 (46%), Positives = 58/91 (64%), Gaps = 0/91 (0%)

Query  5   YLLSPAAQAHLEEIWDCTYDRWGVDQAEQYLRELQHAIDRAAANPRIGRACDEIRPGYRK  64
           + L+ AA+A L +I   T  RWG +Q   YL++   +    A NP IG++CDEIR GY+K
Sbjct  4   FNLTVAAKADLRDIALFTQRRWGKEQRNVYLKQFDDSFWLLAENPDIGKSCDEIREGYKK  63

Query  65  LSAGSHTLFYRVTGEGTIDVVRVLHQRMDVD  95
            S GSH +FY+  G   I V+R+LH+ MDV+
Sbjct  64  FSQGSHVIFYQQIGSQQIRVIRILHKSMDVN  94


>gi|188584324|ref|YP_001927769.1| plasmid stabilization system [Methylobacterium populi BJ001]
 gi|179347822|gb|ACB83234.1| plasmid stabilization system [Methylobacterium populi BJ001]
Length=96

 Score = 86.7 bits (213),  Expect = 1e-15, Method: Compositional matrix adjust.
 Identities = 42/92 (46%), Positives = 57/92 (62%), Gaps = 0/92 (0%)

Query  7   LSPAAQAHLEEIWDCTYDRWGVDQAEQYLRELQHAIDRAAANPRIGRACDEIRPGYRKLS  66
           LS AA+  L  IW  +  RW   QA++Y+R    + D        GR  D++RPGY KL+
Sbjct  5   LSAAARRDLSGIWTYSAKRWDEAQADRYVRLFADSFDGLGRGIVKGRKADDVRPGYFKLA  64

Query  67  AGSHTLFYRVTGEGTIDVVRVLHQRMDVDRNL  98
            GSH +FYR+     I+VVR+LHQRMD+DR+L
Sbjct  65  VGSHLIFYRMGAADVIEVVRILHQRMDIDRHL  96


>gi|153215750|ref|ZP_01950119.1| plasmid stabilization element ParE [Vibrio cholerae 1587]
 gi|153217610|ref|ZP_01951291.1| plasmid stabilization element ParE [Vibrio cholerae 1587]
 gi|153217675|ref|ZP_01951356.1| plasmid stabilization element ParE [Vibrio cholerae 1587]
 7 more sequence titles
 gi|153217723|ref|ZP_01951404.1| plasmid stabilization element ParE, putative [Vibrio cholerae 
1587]
 gi|153825862|ref|ZP_01978529.1| plasmid stabilization element ParE [Vibrio cholerae MZO-2]
 gi|124113331|gb|EAY32151.1| plasmid stabilization element ParE, putative [Vibrio cholerae 
1587]
 gi|124113376|gb|EAY32196.1| plasmid stabilization element ParE [Vibrio cholerae 1587]
 gi|124113439|gb|EAY32259.1| plasmid stabilization element ParE [Vibrio cholerae 1587]
 gi|124114579|gb|EAY33399.1| plasmid stabilization element ParE [Vibrio cholerae 1587]
 gi|149740462|gb|EDM54585.1| plasmid stabilization element ParE [Vibrio cholerae MZO-2]
Length=99

 Score = 85.9 bits (211),  Expect = 2e-15, Method: Compositional matrix adjust.
 Identities = 41/91 (46%), Positives = 57/91 (63%), Gaps = 0/91 (0%)

Query  5   YLLSPAAQAHLEEIWDCTYDRWGVDQAEQYLRELQHAIDRAAANPRIGRACDEIRPGYRK  64
           + L+ AA+A L +I   T  RWG +Q   YL++   +    A NP IG++CDEIR GYRK
Sbjct  4   FNLTVAAKADLRDIALFTQRRWGKEQRNVYLKQFDDSFWLLAENPDIGKSCDEIREGYRK  63

Query  65  LSAGSHTLFYRVTGEGTIDVVRVLHQRMDVD  95
              GSH +FY+  G   I V+R+LH+ MDV+
Sbjct  64  FPQGSHVIFYQQIGSQQIRVIRILHKSMDVN  94


>gi|161520776|ref|YP_001584203.1| plasmid stabilization system protein [Burkholderia multivorans 
ATCC 17616]
 gi|189353042|ref|YP_001948669.1| plasmid maintenance killer protein of plasmid stabilization addiction 
module [Burkholderia multivorans ATCC 17616]
 gi|160344826|gb|ABX17911.1| plasmid stabilization system [Burkholderia multivorans ATCC 17616]
 gi|189337064|dbj|BAG46133.1| plasmid maintenance killer protein of plasmid stabilization addiction 
module [Burkholderia multivorans ATCC 17616]
Length=99

 Score = 85.9 bits (211),  Expect = 2e-15, Method: Compositional matrix adjust.
 Identities = 48/94 (52%), Positives = 61/94 (65%), Gaps = 6/94 (6%)

Query  7   LSPAAQAHLEEIWDCTYDRWGVDQAEQYLRELQHAIDRAAANPRIGRACDEIRPG--YRK  64
           L+P A+A LE IW  TY+RW + QAE+Y+ EL  A +R A    +G      R G  Y +
Sbjct  10  LTPLAEADLEAIWAYTYERWSLGQAERYIGELSTAFERLARRESVGWPS---RAGGNYSR  66

Query  65  LSAGSHTLFYRVTGEGTIDVVRVLHQRMDVDRNL  98
              GSH +FYR T E T+DV+RVLHQRMDVDR+L
Sbjct  67  YLVGSHVVFYRETTE-TLDVIRVLHQRMDVDRHL  99


>gi|337266995|ref|YP_004611050.1| plasmid stabilization system [Mesorhizobium opportunistum WSM2075]
 gi|336027305|gb|AEH86956.1| plasmid stabilization system [Mesorhizobium opportunistum WSM2075]
Length=97

 Score = 85.9 bits (211),  Expect = 2e-15, Method: Compositional matrix adjust.
 Identities = 40/92 (44%), Positives = 59/92 (65%), Gaps = 1/92 (1%)

Query  7   LSPAAQAHLEEIWDCTYDRWGVDQAEQYLRELQHAIDRAAANPRIGRACDEIRPGYRKLS  66
            SP A+A L++IWD +   WG ++AE Y+R ++  I+     P + +  + IRPG  K +
Sbjct  7   FSPKAKADLDQIWDHSLKEWGAERAEAYIRTIRSIINLIDQFPAMAKNAENIRPGLLKYA  66

Query  67  AGSHTLFYRVTGEGTIDVVRVLHQRMDVDRNL  98
            GSH LF R+  + +IDVVR+LHQRMD  R+L
Sbjct  67  VGSHVLFLRI-ADRSIDVVRILHQRMDYPRHL  97


>gi|304313241|ref|YP_003812839.1| Putative plasmid stabilization element ParE [gamma proteobacterium 
HdN1]
 gi|301798974|emb|CBL47212.1| Putative plasmid stabilization element ParE [gamma proteobacterium 
HdN1]
Length=97

 Score = 85.1 bits (209),  Expect = 3e-15, Method: Compositional matrix adjust.
 Identities = 41/93 (45%), Positives = 58/93 (63%), Gaps = 0/93 (0%)

Query  6   LLSPAAQAHLEEIWDCTYDRWGVDQAEQYLRELQHAIDRAAANPRIGRACDEIRPGYRKL  65
           LL+ AA+  L +I   T ++WG  Q ++YL++L  A    A  P IGR  D I+ GY+K 
Sbjct  5   LLTTAARKDLIDIGRFTTEKWGKRQRDKYLKQLDDAFKLLARQPEIGRDADNIKLGYKKF  64

Query  66  SAGSHTLFYRVTGEGTIDVVRVLHQRMDVDRNL  98
           + GSH +FYR   E  I V+R+LH  MDVD++L
Sbjct  65  NQGSHIIFYRAGTESKIVVIRILHNSMDVDQHL  97


>gi|115360825|ref|YP_777962.1| plasmid stabilization system protein [Burkholderia ambifaria 
AMMD]
 gi|115286153|gb|ABI91628.1| plasmid stabilization system [Burkholderia ambifaria AMMD]
Length=99

 Score = 85.1 bits (209),  Expect = 3e-15, Method: Compositional matrix adjust.
 Identities = 45/92 (49%), Positives = 61/92 (67%), Gaps = 2/92 (2%)

Query  7   LSPAAQAHLEEIWDCTYDRWGVDQAEQYLRELQHAIDRAAANPRIGRACDEIRPGYRKLS  66
           L+P A+A LE+IW  T++RW ++QAE Y+ EL  A +R A     GR       GY +  
Sbjct  10  LTPLAEADLEDIWTYTFERWSLEQAEHYVGELASAFERLARREWRGRPS-RAGNGYWRYM  68

Query  67  AGSHTLFYRVTGEGTIDVVRVLHQRMDVDRNL  98
            GSH +FYR T + ++DV+RVLHQRMDVDR+L
Sbjct  69  VGSHVVFYRETAD-SLDVIRVLHQRMDVDRHL  99


>gi|30250054|ref|NP_842124.1| plasmid stabilization protein ParE [Nitrosomonas europaea ATCC 
19718]
 gi|30139161|emb|CAD86025.1| putative plasmid stabilization protein ParE [Nitrosomonas europaea 
ATCC 19718]
Length=114

 Score = 84.7 bits (208),  Expect = 4e-15, Method: Compositional matrix adjust.
 Identities = 41/94 (44%), Positives = 59/94 (63%), Gaps = 1/94 (1%)

Query  5   YLLSPAAQAHLEEIWDCTYDRWGVDQAEQYLRELQHAIDRAAANPRIGRACDEIRPGYRK  64
           YLLSP A+  +  I   T  +WG  QA++Y+  L+  +   A NP +GRA DEI+ GYR 
Sbjct  4   YLLSPEAKTDITNIRQYTTQQWGKTQADKYILRLRERMRWLADNPMLGRARDEIKEGYRS  63

Query  65  LSAGSHTLFYRVTGEGTIDVVRVLHQRMDVDRNL  98
            S G H +FYR+ G   I+V+ + HQ MD+++NL
Sbjct  64  FSEGDHVIFYRMAG-SAIEVIGIPHQNMDIEQNL  96


>gi|343503260|ref|ZP_08741086.1| Plasmid stabilization element ParE [Vibrio tubiashii ATCC 19109]
 gi|342812064|gb|EGU47084.1| Plasmid stabilization element ParE [Vibrio tubiashii ATCC 19109]
Length=99

 Score = 84.3 bits (207),  Expect = 5e-15, Method: Compositional matrix adjust.
 Identities = 38/91 (42%), Positives = 56/91 (62%), Gaps = 0/91 (0%)

Query  5   YLLSPAAQAHLEEIWDCTYDRWGVDQAEQYLRELQHAIDRAAANPRIGRACDEIRPGYRK  64
           + L+  A++ L +I   T  RWG +Q   YL++   +    A NP IG+ACDEIR GYRK
Sbjct  4   FQLTSKAKSDLRDIALFTSRRWGREQRNVYLKQFDESFWLLAENPDIGKACDEIRKGYRK  63

Query  65  LSAGSHTLFYRVTGEGTIDVVRVLHQRMDVD  95
               SH +FYR  G   I+++R+LH+ +DV+
Sbjct  64  FPQSSHVIFYRQIGSQKIEIIRILHKSIDVN  94


>gi|222085620|ref|YP_002544150.1| hypothetical protein Arad_1901 [Agrobacterium radiobacter K84]
 gi|221723068|gb|ACM26224.1| conserved hypothetical protein [Agrobacterium radiobacter K84]
Length=99

 Score = 84.3 bits (207),  Expect = 6e-15, Method: Compositional matrix adjust.
 Identities = 46/97 (48%), Positives = 60/97 (62%), Gaps = 2/97 (2%)

Query  2   SSRYLLSPAAQAHLEEIWDCTYDRWGVDQAEQYLRELQHAIDRAAANPRIGRACDEIRPG  61
           S RY+LSP A+A LEEIW  T + W V QAE Y   +  A +  A+  ++GR  D IR G
Sbjct  5   SGRYVLSPLAEADLEEIWRYTAENWSVKQAETYHAGILDAFEGLASGLKVGRYAD-IREG  63

Query  62  YRKLSAGSHTLFYRVTGEGTIDVVRVLHQRMDVDRNL  98
           Y K   GSH ++YR   +  I V+R+LHQRMDV  +L
Sbjct  64  YFKYVVGSHVIYYR-QQDTEIAVIRILHQRMDVGLHL  99


>gi|170700269|ref|ZP_02891283.1| plasmid stabilization system [Burkholderia ambifaria IOP40-10]
 gi|170134806|gb|EDT03120.1| plasmid stabilization system [Burkholderia ambifaria IOP40-10]
Length=99

 Score = 84.0 bits (206),  Expect = 7e-15, Method: Compositional matrix adjust.
 Identities = 44/92 (48%), Positives = 61/92 (67%), Gaps = 2/92 (2%)

Query  7   LSPAAQAHLEEIWDCTYDRWGVDQAEQYLRELQHAIDRAAANPRIGRACDEIRPGYRKLS  66
           L+P A+  LE+IW  T++RW ++QAE Y+ EL  A +R A     G+     + GY +  
Sbjct  10  LTPLAETDLEDIWTYTFERWSLEQAEHYVDELAAAFERLARREWAGQPSRAGK-GYWRYL  68

Query  67  AGSHTLFYRVTGEGTIDVVRVLHQRMDVDRNL  98
            GSH +FYR T + T+DV+RVLHQRMDVDR+L
Sbjct  69  VGSHVVFYRETTD-TVDVIRVLHQRMDVDRHL  99


>gi|344199020|ref|YP_004783346.1| plasmid stabilization system [Acidithiobacillus ferrivorans SS3]
 gi|343774464|gb|AEM47020.1| plasmid stabilization system [Acidithiobacillus ferrivorans SS3]
Length=96

 Score = 83.6 bits (205),  Expect = 1e-14, Method: Compositional matrix adjust.
 Identities = 45/96 (47%), Positives = 59/96 (62%), Gaps = 1/96 (1%)

Query  3   SRYLLSPAAQAHLEEIWDCTYDRWGVDQAEQYLRELQHAIDRAAANPRIGRACDEIRPGY  62
           + + L+PAA   LE IW  T  +WGV QAE+YL  L  + +  A  P    ACD+IRPGY
Sbjct  2   AEFRLTPAALRDLEGIWRYTAQQWGVAQAERYLDALNASFEDLAHAPLSAPACDDIRPGY  61

Query  63  RKLSAGSHTLFYRVTGEGTIDVVRVLHQRMDVDRNL  98
           R+     H ++YRV    T+ VVRVLH+RMD  R+L
Sbjct  62  RRHGVERHAVYYRVEAV-TVIVVRVLHERMDAPRHL  96


>gi|254285011|ref|ZP_04959977.1| Plasmid stabilization system protein [Vibrio cholerae AM-19226]
 gi|150425014|gb|EDN16791.1| Plasmid stabilization system protein [Vibrio cholerae AM-19226]
Length=99

 Score = 83.2 bits (204),  Expect = 1e-14, Method: Compositional matrix adjust.
 Identities = 40/91 (44%), Positives = 56/91 (62%), Gaps = 0/91 (0%)

Query  5   YLLSPAAQAHLEEIWDCTYDRWGVDQAEQYLRELQHAIDRAAANPRIGRACDEIRPGYRK  64
           + L+ AA+A L +I   T  RWG +Q   YL++   +    A NP IG++CDEIR G RK
Sbjct  4   FNLTVAAKADLRDIALFTQQRWGKEQRNVYLKQFDDSFWLLAENPDIGKSCDEIREGCRK  63

Query  65  LSAGSHTLFYRVTGEGTIDVVRVLHQRMDVD  95
              GSH +FY+  G   I V+R+LH+ MDV+
Sbjct  64  FPQGSHVIFYQQIGSQQIRVIRILHKSMDVN  94


>gi|225873779|ref|YP_002755238.1| plasmid stabilization system protein, RelE/ParE family [Acidobacterium 
capsulatum ATCC 51196]
 gi|225792493|gb|ACO32583.1| plasmid stabilization system protein, RelE/ParE family [Acidobacterium 
capsulatum ATCC 51196]
Length=106

 Score = 83.2 bits (204),  Expect = 1e-14, Method: Compositional matrix adjust.
 Identities = 44/94 (47%), Positives = 57/94 (61%), Gaps = 6/94 (6%)

Query  5   YLLSPAAQAHLEEIWDCTYDRWGVDQAEQYLRELQHAIDRAAANPRIGRACDEIRPGYRK  64
           Y LS  A A L+ I   T   WG+ QA+QYL EL+  I R A+N  +GRACDEIR GYR+
Sbjct  4   YRLSRLALADLKAIALYTRQTWGLAQAQQYLAELEEMILRLASNSHLGRACDEIRKGYRR  63

Query  65  LSAGSHTLFYRV------TGEGTIDVVRVLHQRM  92
           +    H LFYRV          T++++R+LH RM
Sbjct  64  IEQRRHVLFYRVRRSSRSAQSETVEIIRILHARM  97


>gi|332140033|ref|YP_004425771.1| putative plasmid stabilization element ParE [Alteromonas macleodii 
str. 'Deep ecotype']
 gi|327550055|gb|AEA96773.1| putative plasmid stabilization element ParE [Alteromonas macleodii 
str. 'Deep ecotype']
Length=100

 Score = 82.8 bits (203),  Expect = 2e-14, Method: Compositional matrix adjust.
 Identities = 37/91 (41%), Positives = 57/91 (63%), Gaps = 0/91 (0%)

Query  5   YLLSPAAQAHLEEIWDCTYDRWGVDQAEQYLRELQHAIDRAAANPRIGRACDEIRPGYRK  64
           + L+  A++ L++I   T  +WG +Q   YL++   +    + NP IG+ CDEIR GYRK
Sbjct  4   FKLTVLAKSDLKDIALFTQRKWGREQRNIYLKQFDDSFWMLSENPDIGKCCDEIRDGYRK  63

Query  65  LSAGSHTLFYRVTGEGTIDVVRVLHQRMDVD  95
              GSH +FY+ TG   I ++R+LH+ MDV+
Sbjct  64  FPQGSHVIFYKQTGSQEILIIRILHKSMDVN  94


>gi|218709435|ref|YP_002417056.1| putative addiction module toxin [Vibrio splendidus LGP32]
 gi|218322454|emb|CAV18607.1| putative addiction module toxin [Vibrio splendidus LGP32]
Length=100

 Score = 82.0 bits (201),  Expect = 3e-14, Method: Compositional matrix adjust.
 Identities = 36/90 (40%), Positives = 52/90 (58%), Gaps = 0/90 (0%)

Query  5   YLLSPAAQAHLEEIWDCTYDRWGVDQAEQYLRELQHAIDRAAANPRIGRACDEIRPGYRK  64
           + L+  A++ L++I   T  RWG  Q   Y+R+      R A NP +G+ CDEIRP YRK
Sbjct  4   FQLTNKAKSDLKDIALFTERRWGRKQRNVYIRQFDATFGRLAENPELGKTCDEIRPDYRK  63

Query  65  LSAGSHTLFYRVTGEGTIDVVRVLHQRMDV  94
               SH +FY+ T      ++R+LH+ MDV
Sbjct  64  FPLASHVIFYQKTNNQPTLIIRILHKSMDV  93


>gi|320156285|ref|YP_004188664.1| plasmid stabilization element ParE [Vibrio vulnificus MO6-24/O]
 gi|319931597|gb|ADV86461.1| plasmid stabilization element ParE putative [Vibrio vulnificus 
MO6-24/O]
Length=81

 Score = 82.0 bits (201),  Expect = 3e-14, Method: Compositional matrix adjust.
 Identities = 36/74 (49%), Positives = 48/74 (65%), Gaps = 0/74 (0%)

Query  22  TYDRWGVDQAEQYLRELQHAIDRAAANPRIGRACDEIRPGYRKLSAGSHTLFYRVTGEGT  81
           T  RWG +Q   YL++   +    A NP IG+ACDEIR GYRK   GSH +FYR  G   
Sbjct  3   TSRRWGREQRNIYLKQFDDSFWLLAENPDIGKACDEIRDGYRKFPQGSHVIFYRQIGSQN  62

Query  82  IDVVRVLHQRMDVD  95
           I+++R+LH+ MDV+
Sbjct  63  IEIIRILHKSMDVN  76


>gi|89052515|ref|YP_507966.1| plasmid stabilization system protein [Jannaschia sp. CCS1]
 gi|88862064|gb|ABD52941.1| plasmid stabilization system [Jannaschia sp. CCS1]
Length=94

 Score = 81.6 bits (200),  Expect = 3e-14, Method: Compositional matrix adjust.
 Identities = 41/91 (46%), Positives = 57/91 (63%), Gaps = 1/91 (1%)

Query  6   LLSPAAQAHLEEIWDCTYDRWGVDQAEQYLRELQHAIDRAAANPRIGRACDEIRPGYRKL  65
           +++P A A L  I+D T D WG+DQA++YL EL   I        + R+ +E+ PG R+ 
Sbjct  5   VIAPRADADLIGIYDYTSDTWGLDQADKYLDELHGRISGLVTGATVSRSAEEVGPGLRRA  64

Query  66  SAGSHTLFYRVTGEGTIDVVRVLHQRMDVDR  96
            AG H +F+R   E T+ VVRVLHQRMD+ R
Sbjct  65  LAGQHVVFFREDAE-TVKVVRVLHQRMDLGR  94


>gi|16125126|ref|NP_419690.1| hypothetical protein CC_0873 [Caulobacter crescentus CB15]
 gi|221233853|ref|YP_002516289.1| toxin protein parE-1 [Caulobacter crescentus NA1000]
 gi|81535825|sp|Q9A9T8.1|PARE1_CAUCR RecName: Full=Toxin ParE1
 gi|13422134|gb|AAK22858.1| conserved hypothetical protein [Caulobacter crescentus CB15]
 gi|220963025|gb|ACL94381.1| toxin protein parE-1 [Caulobacter crescentus NA1000]
Length=96

 Score = 81.6 bits (200),  Expect = 3e-14, Method: Compositional matrix adjust.
 Identities = 41/94 (44%), Positives = 62/94 (66%), Gaps = 2/94 (2%)

Query  5   YLLSPAAQAHLEEIWDCTYDRWGVDQAEQYLRELQHAIDRAAANPRIGRACDEIRPGYRK  64
           Y LS  A+A L++IW  +  RWGV+QA  Y RELQ  I+  A +P +G+  + +R GYR+
Sbjct  4   YRLSRRAKADLDDIWTYSEQRWGVEQAADYARELQATIEMIAEHPGMGQPDENLRAGYRR  63

Query  65  LSAGSHTLFYRVTGEGTIDVVRVLHQRMDVDRNL  98
            ++GSH +FYRV     ++++RVLHQ M+   +L
Sbjct  64  CASGSHVVFYRVGVR--VEIIRVLHQSMNARAHL  95


>gi|30248281|ref|NP_840351.1| plasmid stabilization element ParE [Nitrosomonas europaea ATCC 
19718]
 gi|30180166|emb|CAD84172.1| putative plasmid stabilization element ParE [Nitrosomonas europaea 
ATCC 19718]
Length=97

 Score = 81.3 bits (199),  Expect = 4e-14, Method: Compositional matrix adjust.
 Identities = 39/94 (42%), Positives = 55/94 (59%), Gaps = 0/94 (0%)

Query  5   YLLSPAAQAHLEEIWDCTYDRWGVDQAEQYLRELQHAIDRAAANPRIGRACDEIRPGYRK  64
           ++L   A   L  I   T   WG  Q  +YL +L  A    A  P +GRACD+IR GY K
Sbjct  4   FILRQKAMDDLLSIGRYTRKEWGKTQQIRYLTQLDRAFHELADKPGLGRACDDIREGYFK  63

Query  65  LSAGSHTLFYRVTGEGTIDVVRVLHQRMDVDRNL  98
              G H +FYR TG+  I+++R+LH RMD++++L
Sbjct  64  YGVGKHVIFYRHTGKDQIEIIRILHGRMDIEQHL  97


>gi|336451956|ref|ZP_08622389.1| plasmid stabilization system protein [Idiomarina sp. A28L]
 gi|336281003|gb|EGN74287.1| plasmid stabilization system protein [Idiomarina sp. A28L]
Length=90

 Score = 80.1 bits (196),  Expect = 1e-13, Method: Compositional matrix adjust.
 Identities = 36/86 (42%), Positives = 51/86 (60%), Gaps = 0/86 (0%)

Query  13  AHLEEIWDCTYDRWGVDQAEQYLRELQHAIDRAAANPRIGRACDEIRPGYRKLSAGSHTL  72
           A L  I   T +RWG++Q   YL++  +A    A  P  G+ACD I   YRK   GSH +
Sbjct  2   ADLRAIAIFTEERWGIEQRNLYLKQFDNAFHMLARTPLAGKACDYIENNYRKFPQGSHII  61

Query  73  FYRVTGEGTIDVVRVLHQRMDVDRNL  98
           FYR + +  I++VR+LH+ MDV+ N 
Sbjct  62  FYRKSNKQGIEIVRILHKNMDVEPNF  87


>gi|83956446|ref|ZP_00964867.1| hypothetical protein NAS141_01051 [Sulfitobacter sp. NAS-14.1]
 gi|83839331|gb|EAP78518.1| hypothetical protein NAS141_01051 [Sulfitobacter sp. NAS-14.1]
Length=104

 Score = 79.7 bits (195),  Expect = 1e-13, Method: Compositional matrix adjust.
 Identities = 41/94 (44%), Positives = 58/94 (62%), Gaps = 2/94 (2%)

Query  5    YLLSPAAQAHLEEIWDCTYDRWGVDQAEQYLRELQHAIDRAAANPRIGRACDEIRPGYRK  64
            Y LSP A+  LEEIW  T+  W + QA+ Y R+L    +   +  + GR  D +RP Y K
Sbjct  13   YALSPLAEIDLEEIWFYTFQNWSLAQADSYHRDLIATFEGLVSGTKRGREVD-VRPDYLK  71

Query  65   LSAGSHTLFYRVTGEGTIDVVRVLHQRMDVDRNL  98
               GSH +++R +G+  I+V+RVLHQR DV+ NL
Sbjct  72   CPVGSHMIYFRDSGD-QIEVIRVLHQRQDVNLNL  104


>gi|54302872|ref|YP_132865.1| putative plasmid stabilization element ParE [Photobacterium profundum 
SS9]
 gi|46916296|emb|CAG23065.1| putative Plasmid stabilization element ParE [Photobacterium profundum 
SS9]
Length=97

 Score = 79.3 bits (194),  Expect = 2e-13, Method: Compositional matrix adjust.
 Identities = 33/96 (35%), Positives = 58/96 (61%), Gaps = 0/96 (0%)

Query  3   SRYLLSPAAQAHLEEIWDCTYDRWGVDQAEQYLRELQHAIDRAAANPRIGRACDEIRPGY  62
           + ++++  A++ L +I   T   WG+++   YL++   +    A  P IG  C+ I+ GY
Sbjct  2   NHFIVTNKAKSDLIDIARYTQKNWGINRRNSYLKQFDDSFHSLAREPMIGICCEYIKAGY  61

Query  63  RKLSAGSHTLFYRVTGEGTIDVVRVLHQRMDVDRNL  98
           RK   GSH ++YR     +I+++RVLH+ MDV+RN+
Sbjct  62  RKFPQGSHIIYYRQNESQSIEIIRVLHKSMDVNRNI  97


>gi|330962389|gb|EGH62649.1| plasmid stabilization system [Pseudomonas syringae pv. maculicola 
str. ES4326]
Length=96

 Score = 79.3 bits (194),  Expect = 2e-13, Method: Compositional matrix adjust.
 Identities = 37/91 (41%), Positives = 53/91 (59%), Gaps = 1/91 (1%)

Query  3   SRYLLSPAAQAHLEEIWDCTYDRWGVDQAEQYLRELQHAIDRAAANPRIGRACDEIRPGY  62
           S Y L+PAA+  LE IW  T+  WG  QA +Y+  +       A +P+  + CD IR GY
Sbjct  2   SEYRLAPAAERDLEAIWVYTFHEWGSTQANRYIDSITKVFTELAHSPKTAQTCDHIRTGY  61

Query  63  RKLSAGSHTLFYRVTGEGTIDVVRVLHQRMD  93
           R+ S   H +++R+   G I V R+LH+RMD
Sbjct  62  RRRSVERHMIYFRIMPYG-IAVTRILHERMD  91


>gi|126667004|ref|ZP_01737979.1| Plasmid stabilization element ParE [Marinobacter sp. ELB17]
 gi|126628410|gb|EAZ99032.1| Plasmid stabilization element ParE [Marinobacter sp. ELB17]
Length=98

 Score = 78.2 bits (191),  Expect = 4e-13, Method: Compositional matrix adjust.
 Identities = 34/88 (39%), Positives = 51/88 (58%), Gaps = 0/88 (0%)

Query  5   YLLSPAAQAHLEEIWDCTYDRWGVDQAEQYLRELQHAIDRAAANPRIGRACDEIRPGYRK  64
           + LS  A+A L+ I   T   WG  Q   Y+ +  H       NP +G+ CD+I  GYR+
Sbjct  4   FKLSRKAKADLKSIALYTESEWGRGQRNHYILQFDHCFHLLGENPNLGQVCDQISAGYRQ  63

Query  65  LSAGSHTLFYRVTGEGTIDVVRVLHQRM  92
              GSH +FYR++ EG  +++R+LH+RM
Sbjct  64  YPQGSHIIFYRLSTEGVAEIIRILHKRM  91


>gi|78357951|ref|YP_389400.1| hypothetical protein Dde_2911 [Desulfovibrio alaskensis G20]
 gi|78220356|gb|ABB39705.1| plasmid stabilization system [Desulfovibrio alaskensis G20]
Length=102

 Score = 77.8 bits (190),  Expect = 4e-13, Method: Compositional matrix adjust.
 Identities = 38/93 (41%), Positives = 54/93 (59%), Gaps = 5/93 (5%)

Query  7   LSPAAQAHLEEIWDCTYDRWGVDQAEQYLRELQHAIDRAAANPRIGRACDEIRPGYRKLS  66
           ++ AA+AHL +IW  T   WG  QA+ YL+++  A DR A  P +G+A  EI   YR L 
Sbjct  6   ITAAAKAHLLDIWAYTEAAWGASQADVYLKDIGAAFDRLAHTPHLGKARPEIHNDYRSLP  65

Query  67  AGSHTLFYRVTGEGT-----IDVVRVLHQRMDV  94
              H +FY VT   T     ++++ VLH +MDV
Sbjct  66  VKIHVIFYTVTNSATNSVTFVNIIGVLHAKMDV  98


>gi|289526820|pdb|3KXE|A Chain A, A Conserved Mode Of Protein Recognition And Binding 
In A Pard-Pare Toxin-Antitoxin Complex
 gi|289526821|pdb|3KXE|B Chain B, A Conserved Mode Of Protein Recognition And Binding 
In A Pard-Pare Toxin-Antitoxin Complex
Length=110

 Score = 77.8 bits (190),  Expect = 5e-13, Method: Compositional matrix adjust.
 Identities = 40/94 (43%), Positives = 60/94 (64%), Gaps = 2/94 (2%)

Query  5    YLLSPAAQAHLEEIWDCTYDRWGVDQAEQYLRELQHAIDRAAANPRIGRACDEIRPGYRK  64
            Y LS  A+A L++IW  +  RWGV+QA  Y RELQ  I+  A +P  G+  + +R GYR+
Sbjct  18   YRLSRRAKADLDDIWTYSEQRWGVEQAADYARELQATIEXIAEHPGXGQPDENLRAGYRR  77

Query  65   LSAGSHTLFYRVTGEGTIDVVRVLHQRMDVDRNL  98
             ++GSH +FYRV     ++++RVLHQ  +   +L
Sbjct  78   CASGSHVVFYRVGVR--VEIIRVLHQSXNARAHL  109



Lambda     K      H
   0.322    0.136    0.422 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 130183417542


  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
    Posted date:  Sep 5, 2011  4:36 AM
  Number of letters in database: 5,219,829,388
  Number of sequences in database:  15,229,318



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40