BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv1960c Length=83 Score E Sequences producing significant alignments: (Bits) Value gi|15609097|ref|NP_216476.1| hypothetical protein Rv1960c [Mycob... 161 4e-38 gi|340626969|ref|YP_004745421.1| hypothetical protein MCAN_19761... 159 1e-37 gi|41410178|ref|NP_963014.1| hypothetical protein MAP4080c [Myco... 142 2e-32 gi|118465218|ref|YP_883685.1| addiction module antidote protein,... 140 4e-32 gi|254776987|ref|ZP_05218503.1| hypothetical protein MaviaA2_202... 138 3e-31 gi|333992846|ref|YP_004525460.1| hypothetical protein JDM601_420... 138 3e-31 gi|296165358|ref|ZP_06847899.1| CopG/Arc/MetJ family transcripti... 135 2e-30 gi|240171129|ref|ZP_04749788.1| hypothetical protein MkanA1_1759... 133 1e-29 gi|323139774|ref|ZP_08074810.1| putative addiction module antido... 106 1e-21 gi|326772355|ref|ZP_08231640.1| addiction module antidote protei... 97.4 6e-19 gi|343524062|ref|ZP_08761022.1| addiction module antidote protei... 95.1 3e-18 gi|325067325|ref|ZP_08125998.1| predicted transcriptional regula... 94.7 3e-18 gi|254245457|ref|ZP_04938778.1| hypothetical protein BCPG_00158 ... 93.2 1e-17 gi|241258811|ref|YP_002978695.1| putative addiction module antid... 92.8 1e-17 gi|221210056|ref|ZP_03583037.1| putative addiction module antido... 91.7 3e-17 gi|161520777|ref|YP_001584204.1| CopG/Arc/MetJ family addiction ... 91.3 4e-17 gi|209552210|ref|YP_002284125.1| putative addiction module antid... 90.9 5e-17 gi|295680556|ref|YP_003609130.1| CopG family transcriptional reg... 90.5 7e-17 gi|218677950|ref|ZP_03525847.1| putative addiction module antido... 89.7 1e-16 gi|167587204|ref|ZP_02379592.1| putative addiction module antido... 89.7 1e-16 gi|154251166|ref|YP_001411990.1| CopG/Arc/MetJ family transcript... 89.0 2e-16 gi|304312697|ref|YP_003812295.1| Uncharacterized protein family ... 87.4 6e-16 gi|115360824|ref|YP_777961.1| CopG/Arc/MetJ family transcription... 86.7 1e-15 gi|78066268|ref|YP_369037.1| transcriptional regulator [Burkhold... 86.3 1e-15 gi|330814727|ref|YP_004362902.1| Putative transcriptional regula... 85.9 2e-15 gi|167644951|ref|YP_001682614.1| CopG/Arc/MetJ family addiction ... 85.9 2e-15 gi|170700268|ref|ZP_02891282.1| putative addiction module antido... 85.5 3e-15 gi|328542990|ref|YP_004303099.1| CopG-like protein [Polymorphum ... 84.7 4e-15 gi|269124271|ref|YP_003305340.1| CopG-like protein [Paracoccus a... 84.3 5e-15 gi|222085619|ref|YP_002544149.1| hypothetical protein Arad_1900 ... 84.3 5e-15 gi|343083581|ref|YP_004772876.1| addiction module antidote prote... 82.8 2e-14 gi|295690769|ref|YP_003594462.1| addiction module antidote prote... 82.8 2e-14 gi|238025683|ref|YP_002909915.1| CopG/Arc/MetJ family transcript... 82.4 2e-14 gi|50955360|ref|YP_062648.1| hypothetical protein Lxx18000 [Leif... 82.4 2e-14 gi|262163636|ref|ZP_06031378.1| predicted transcriptional regula... 81.3 4e-14 gi|83956447|ref|ZP_00964868.1| hypothetical protein NAS141_01056... 80.9 6e-14 gi|121586008|ref|ZP_01675800.1| putative addiction module antido... 80.9 6e-14 gi|71276108|ref|ZP_00652388.1| Protein of unknown function UPF01... 80.9 6e-14 gi|119386537|ref|YP_917592.1| CopG/Arc/MetJ family transcription... 80.9 6e-14 gi|153828462|ref|ZP_01981129.1| putative addiction module antido... 80.5 7e-14 gi|327485504|gb|AEA79910.1| Predicted transcriptional regulator ... 80.5 8e-14 gi|289758069|ref|ZP_06517447.1| hypothetical protein TBEG_00747 ... 80.1 9e-14 gi|163850943|ref|YP_001638986.1| addiction module antidote prote... 79.3 2e-13 gi|188584325|ref|YP_001927770.1| CopG family transcriptional reg... 79.3 2e-13 gi|119385124|ref|YP_916180.1| CopG/Arc/MetJ family transcription... 79.3 2e-13 gi|262275568|ref|ZP_06053377.1| predicted transcriptional regula... 79.3 2e-13 gi|229523009|ref|ZP_04412421.1| hypothetical protein VIF_003577 ... 77.8 5e-13 gi|15838662|ref|NP_299350.1| hypothetical protein XF2071 [Xylell... 77.0 7e-13 gi|338849229|gb|AEJ27440.1| ParD protein [Paracoccus denitrifica... 77.0 9e-13 gi|343503259|ref|ZP_08741085.1| transcriptional regulator [Vibri... 76.6 1e-12 >gi|15609097|ref|NP_216476.1| hypothetical protein Rv1960c [Mycobacterium tuberculosis H37Rv] gi|15841430|ref|NP_336467.1| hypothetical protein MT2009 [Mycobacterium tuberculosis CDC1551] gi|31793152|ref|NP_855645.1| hypothetical protein Mb1995c [Mycobacterium bovis AF2122/97] 76 more sequence titles Length=83 Score = 161 bits (407), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 82/83 (99%), Positives = 83/83 (100%), Gaps = 0/83 (0%) Query 1 VGKNTSFVLDEHYSAFIDGEIAAGRYRSASEVIRSALRLLEDRETQLRALREALEAGERS 60 +GKNTSFVLDEHYSAFIDGEIAAGRYRSASEVIRSALRLLEDRETQLRALREALEAGERS Sbjct 1 MGKNTSFVLDEHYSAFIDGEIAAGRYRSASEVIRSALRLLEDRETQLRALREALEAGERS 60 Query 61 GSSTPFDFDGFLGRKRADASRGR 83 GSSTPFDFDGFLGRKRADASRGR Sbjct 61 GSSTPFDFDGFLGRKRADASRGR 83 >gi|340626969|ref|YP_004745421.1| hypothetical protein MCAN_19761 [Mycobacterium canettii CIPT 140010059] gi|340005159|emb|CCC44308.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059] Length=83 Score = 159 bits (402), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 81/83 (98%), Positives = 82/83 (99%), Gaps = 0/83 (0%) Query 1 VGKNTSFVLDEHYSAFIDGEIAAGRYRSASEVIRSALRLLEDRETQLRALREALEAGERS 60 +GKNTSFVLDEHYSAFIDGEIAAGRYRSASEVIRSALRLLEDRETQLRALREALEAGERS Sbjct 1 MGKNTSFVLDEHYSAFIDGEIAAGRYRSASEVIRSALRLLEDRETQLRALREALEAGERS 60 Query 61 GSSTPFDFDGFLGRKRADASRGR 83 GSSTPFDFDGFLGRKRADASR R Sbjct 61 GSSTPFDFDGFLGRKRADASRAR 83 >gi|41410178|ref|NP_963014.1| hypothetical protein MAP4080c [Mycobacterium avium subsp. paratuberculosis K-10] gi|41399012|gb|AAS06630.1| hypothetical protein MAP_4080c [Mycobacterium avium subsp. paratuberculosis K-10] gi|336460600|gb|EGO39493.1| putative addiction module antidote protein, CC2985 family [Mycobacterium avium subsp. paratuberculosis S397] Length=87 Score = 142 bits (357), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 70/83 (85%), Positives = 77/83 (93%), Gaps = 0/83 (0%) Query 1 VGKNTSFVLDEHYSAFIDGEIAAGRYRSASEVIRSALRLLEDRETQLRALREALEAGERS 60 VGKNTSF LDEHYSAFI+ E+A+GRYRSAS+V+RSALRLLEDRETQLRALREALEAGERS Sbjct 5 VGKNTSFSLDEHYSAFIESEVASGRYRSASDVVRSALRLLEDRETQLRALREALEAGERS 64 Query 61 GSSTPFDFDGFLGRKRADASRGR 83 G+STPFDFD FL RKR +AS GR Sbjct 65 GTSTPFDFDTFLDRKRTEASDGR 87 >gi|118465218|ref|YP_883685.1| addiction module antidote protein, CC2985 family protein [Mycobacterium avium 104] gi|118166505|gb|ABK67402.1| putative addiction module antidote protein, CC2985 family protein [Mycobacterium avium 104] Length=122 Score = 140 bits (354), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 70/83 (85%), Positives = 77/83 (93%), Gaps = 0/83 (0%) Query 1 VGKNTSFVLDEHYSAFIDGEIAAGRYRSASEVIRSALRLLEDRETQLRALREALEAGERS 60 VGKNTSF LDEHYSAFI+ E+A+GRYRSAS+V+RSALRLLEDRETQLRALREALEAGERS Sbjct 40 VGKNTSFSLDEHYSAFIESEVASGRYRSASDVVRSALRLLEDRETQLRALREALEAGERS 99 Query 61 GSSTPFDFDGFLGRKRADASRGR 83 G+STPFDFD FL RKR +AS GR Sbjct 100 GTSTPFDFDTFLDRKRTEASDGR 122 >gi|254776987|ref|ZP_05218503.1| hypothetical protein MaviaA2_20281 [Mycobacterium avium subsp. avium ATCC 25291] Length=87 Score = 138 bits (347), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 69/83 (84%), Positives = 76/83 (92%), Gaps = 0/83 (0%) Query 1 VGKNTSFVLDEHYSAFIDGEIAAGRYRSASEVIRSALRLLEDRETQLRALREALEAGERS 60 VGKNTSF LDEHYSAFI+ E+A+GRYRSAS+V+RSALRLLEDRETQLRALR ALEAGERS Sbjct 5 VGKNTSFSLDEHYSAFIEREVASGRYRSASDVVRSALRLLEDRETQLRALRAALEAGERS 64 Query 61 GSSTPFDFDGFLGRKRADASRGR 83 G+STPFDFD FL RKR +AS GR Sbjct 65 GTSTPFDFDTFLDRKRTEASDGR 87 >gi|333992846|ref|YP_004525460.1| hypothetical protein JDM601_4206 [Mycobacterium sp. JDM601] gi|333488814|gb|AEF38206.1| conserved hypothetical protein [Mycobacterium sp. JDM601] Length=83 Score = 138 bits (347), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 70/83 (85%), Positives = 72/83 (87%), Gaps = 0/83 (0%) Query 1 VGKNTSFVLDEHYSAFIDGEIAAGRYRSASEVIRSALRLLEDRETQLRALREALEAGERS 60 +GKNTSFVLD+HY AFID EIAAGRYRS SEVIRSALRLLEDRE QLRALR ALE GERS Sbjct 1 MGKNTSFVLDDHYQAFIDQEIAAGRYRSVSEVIRSALRLLEDREAQLRALRTALEDGERS 60 Query 61 GSSTPFDFDGFLGRKRADASRGR 83 G STPFDFD FL RKR DASR R Sbjct 61 GESTPFDFDAFLDRKRTDASRIR 83 >gi|296165358|ref|ZP_06847899.1| CopG/Arc/MetJ family transcriptional regulator [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295899249|gb|EFG78714.1| CopG/Arc/MetJ family transcriptional regulator [Mycobacterium parascrofulaceum ATCC BAA-614] Length=106 Score = 135 bits (339), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 67/83 (81%), Positives = 74/83 (90%), Gaps = 0/83 (0%) Query 1 VGKNTSFVLDEHYSAFIDGEIAAGRYRSASEVIRSALRLLEDRETQLRALREALEAGERS 60 VGKNTSF LDEHYSAFI+ E+AAGRYRSAS+V+RSALRLLEDRE QLRALREAL AGERS Sbjct 24 VGKNTSFSLDEHYSAFIEAEVAAGRYRSASDVVRSALRLLEDREIQLRALREALVAGERS 83 Query 61 GSSTPFDFDGFLGRKRADASRGR 83 G+STPFDFD FL KRA+ +GR Sbjct 84 GTSTPFDFDAFLDGKRAEKPQGR 106 >gi|240171129|ref|ZP_04749788.1| hypothetical protein MkanA1_17591 [Mycobacterium kansasii ATCC 12478] Length=83 Score = 133 bits (334), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 66/83 (80%), Positives = 74/83 (90%), Gaps = 0/83 (0%) Query 1 VGKNTSFVLDEHYSAFIDGEIAAGRYRSASEVIRSALRLLEDRETQLRALREALEAGERS 60 +GKNTSF LDEHYSAFI+ E+AAGRYRSAS+V+RSALRLLEDRE QLRALREAL AGERS Sbjct 1 MGKNTSFSLDEHYSAFIEAEVAAGRYRSASDVVRSALRLLEDREIQLRALREALVAGERS 60 Query 61 GSSTPFDFDGFLGRKRADASRGR 83 G+STPFDFD FL KRA+ +GR Sbjct 61 GTSTPFDFDAFLDGKRAEKPQGR 83 >gi|323139774|ref|ZP_08074810.1| putative addiction module antidote protein, CopG/Arc/MetJ family [Methylocystis sp. ATCC 49242] gi|322394978|gb|EFX97543.1| putative addiction module antidote protein, CopG/Arc/MetJ family [Methylocystis sp. ATCC 49242] Length=84 Score = 106 bits (265), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 48/78 (62%), Positives = 67/78 (86%), Gaps = 0/78 (0%) Query 1 VGKNTSFVLDEHYSAFIDGEIAAGRYRSASEVIRSALRLLEDRETQLRALREALEAGERS 60 + KNTSFV+ +H+++F++ ++AAGRY SAS+V+R+ALRLLE++ET+L ALR AL GE S Sbjct 2 MAKNTSFVIGDHFASFVEAQVAAGRYGSASDVVRAALRLLEEQETKLAALRAALIEGETS 61 Query 61 GSSTPFDFDGFLGRKRAD 78 G+STPFDF+ F+ RKRAD Sbjct 62 GASTPFDFEAFIARKRAD 79 >gi|326772355|ref|ZP_08231640.1| addiction module antidote protein, CC2985 family [Actinomyces viscosus C505] gi|326638488|gb|EGE39389.1| addiction module antidote protein, CC2985 family [Actinomyces viscosus C505] Length=80 Score = 97.4 bits (241), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 45/74 (61%), Positives = 58/74 (79%), Gaps = 0/74 (0%) Query 4 NTSFVLDEHYSAFIDGEIAAGRYRSASEVIRSALRLLEDRETQLRALREALEAGERSGSS 63 NTS LD+H++ FI ++ +GRYRSASEVIR+ LRLLED+ET++ ALREAL +GE SG + Sbjct 4 NTSVSLDDHFAGFIASQVGSGRYRSASEVIRAGLRLLEDQETEMSALREALASGEASGQA 63 Query 64 TPFDFDGFLGRKRA 77 PFDFD F+ K A Sbjct 64 EPFDFDAFIAAKTA 77 >gi|343524062|ref|ZP_08761022.1| addiction module antidote protein, CC2985 family [Actinomyces sp. oral taxon 175 str. F0384] gi|343399043|gb|EGV11568.1| addiction module antidote protein, CC2985 family [Actinomyces sp. oral taxon 175 str. F0384] Length=80 Score = 95.1 bits (235), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 45/74 (61%), Positives = 56/74 (76%), Gaps = 0/74 (0%) Query 4 NTSFVLDEHYSAFIDGEIAAGRYRSASEVIRSALRLLEDRETQLRALREALEAGERSGSS 63 NTS LD+H+ FI ++ +GRYRSASEVIR+ LRLLEDRET++ AL EAL +GE SG + Sbjct 4 NTSVSLDDHFVGFIASQVGSGRYRSASEVIRAGLRLLEDRETEMSALCEALASGEASGQA 63 Query 64 TPFDFDGFLGRKRA 77 PFDFD F+ K A Sbjct 64 EPFDFDAFIAAKSA 77 >gi|325067325|ref|ZP_08125998.1| predicted transcriptional regulator [Actinomyces oris K20] Length=80 Score = 94.7 bits (234), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 44/74 (60%), Positives = 57/74 (78%), Gaps = 0/74 (0%) Query 4 NTSFVLDEHYSAFIDGEIAAGRYRSASEVIRSALRLLEDRETQLRALREALEAGERSGSS 63 NTS LD+H+ FI ++ +GRYRSASEVIR+ LRLLE++ET++ ALREAL +GE SG + Sbjct 4 NTSVSLDDHFVGFIASQVGSGRYRSASEVIRAGLRLLENQETEMSALREALASGEASGQA 63 Query 64 TPFDFDGFLGRKRA 77 PFDFD F+ K A Sbjct 64 EPFDFDAFIAAKAA 77 >gi|254245457|ref|ZP_04938778.1| hypothetical protein BCPG_00158 [Burkholderia cenocepacia PC184] gi|124870233|gb|EAY61949.1| hypothetical protein BCPG_00158 [Burkholderia cenocepacia PC184] Length=81 Score = 93.2 bits (230), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 43/77 (56%), Positives = 60/77 (78%), Gaps = 0/77 (0%) Query 1 VGKNTSFVLDEHYSAFIDGEIAAGRYRSASEVIRSALRLLEDRETQLRALREALEAGERS 60 + +NTS L +H++AF+D ++ +GRY SAS+V+R+ LRLLE ETQ+RAL+EAL+AGE S Sbjct 1 MSRNTSVSLGDHFAAFVDAQVRSGRYGSASDVVRAGLRLLESHETQMRALQEALKAGEGS 60 Query 61 GSSTPFDFDGFLGRKRA 77 G+ PFD + FL R RA Sbjct 61 GTPKPFDSEAFLARMRA 77 >gi|241258811|ref|YP_002978695.1| putative addiction module antidote protein, CopG/Arc/MetJ family [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240863281|gb|ACS60944.1| putative addiction module antidote protein, CopG/Arc/MetJ family [Rhizobium leguminosarum bv. trifolii WSM1325] Length=82 Score = 92.8 bits (229), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 42/77 (55%), Positives = 60/77 (78%), Gaps = 0/77 (0%) Query 1 VGKNTSFVLDEHYSAFIDGEIAAGRYRSASEVIRSALRLLEDRETQLRALREALEAGERS 60 + +NTS L +H+++FID ++ AGRY SAS+V+R+ LRLLE+ E +++AL++AL GE S Sbjct 1 MARNTSISLSDHFTSFIDTQVQAGRYGSASDVVRAGLRLLEEHEAKVKALQDALIEGEES 60 Query 61 GSSTPFDFDGFLGRKRA 77 G +TPFDFD F RKRA Sbjct 61 GPATPFDFDAFNARKRA 77 >gi|221210056|ref|ZP_03583037.1| putative addiction module antidote protein, family [Burkholderia multivorans CGD1] gi|221170744|gb|EEE03210.1| putative addiction module antidote protein, family [Burkholderia multivorans CGD1] Length=81 Score = 91.7 bits (226), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 43/77 (56%), Positives = 59/77 (77%), Gaps = 0/77 (0%) Query 1 VGKNTSFVLDEHYSAFIDGEIAAGRYRSASEVIRSALRLLEDRETQLRALREALEAGERS 60 + +NTS L +H + F+D ++A+GRY SAS+V+R+ LRLLE +ET+LRAL+EAL+AGE S Sbjct 1 MARNTSISLGDHLTEFVDMQVASGRYGSASDVVRAGLRLLETQETELRALQEALKAGEAS 60 Query 61 GSSTPFDFDGFLGRKRA 77 G+ PFD FL R RA Sbjct 61 GTPAPFDSQAFLARMRA 77 >gi|161520777|ref|YP_001584204.1| CopG/Arc/MetJ family addiction module antidote protein [Burkholderia multivorans ATCC 17616] gi|189353041|ref|YP_001948668.1| antitoxin ParD [Burkholderia multivorans ATCC 17616] gi|160344827|gb|ABX17912.1| putative addiction module antidote protein, CopG/Arc/MetJ family [Burkholderia multivorans ATCC 17616] gi|189337063|dbj|BAG46132.1| antitoxin ParD [Burkholderia multivorans ATCC 17616] Length=81 Score = 91.3 bits (225), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 43/77 (56%), Positives = 59/77 (77%), Gaps = 0/77 (0%) Query 1 VGKNTSFVLDEHYSAFIDGEIAAGRYRSASEVIRSALRLLEDRETQLRALREALEAGERS 60 + +NTS L +H + F+D ++A+GRY SAS+V+R+ LRLLE +ET+LRAL+EAL+AGE S Sbjct 1 MARNTSISLGDHLAEFVDMQVASGRYGSASDVVRAGLRLLETQETELRALQEALKAGEAS 60 Query 61 GSSTPFDFDGFLGRKRA 77 G+ PFD FL R RA Sbjct 61 GTPAPFDSQAFLARMRA 77 >gi|209552210|ref|YP_002284125.1| putative addiction module antidote protein, CopG/Arc/MetJ family [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209539322|gb|ACI59254.1| putative addiction module antidote protein, CopG/Arc/MetJ family [Rhizobium leguminosarum bv. trifolii WSM2304] Length=82 Score = 90.9 bits (224), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 41/77 (54%), Positives = 59/77 (77%), Gaps = 0/77 (0%) Query 1 VGKNTSFVLDEHYSAFIDGEIAAGRYRSASEVIRSALRLLEDRETQLRALREALEAGERS 60 + +NTS L +H+ +FID ++ AGRY SA++V+R+ LRLLE+ E +++AL++AL GE S Sbjct 1 MARNTSISLSDHFVSFIDTQVQAGRYGSATDVVRAGLRLLEEHEAKVKALQDALIEGEES 60 Query 61 GSSTPFDFDGFLGRKRA 77 G +TPFDFD F RKRA Sbjct 61 GPATPFDFDAFNARKRA 77 >gi|295680556|ref|YP_003609130.1| CopG family transcriptional regulator [Burkholderia sp. CCGE1002] gi|295440451|gb|ADG19619.1| putative addiction module antidote protein, CopG/Arc/MetJ family [Burkholderia sp. CCGE1002] Length=80 Score = 90.5 bits (223), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 43/80 (54%), Positives = 58/80 (73%), Gaps = 0/80 (0%) Query 1 VGKNTSFVLDEHYSAFIDGEIAAGRYRSASEVIRSALRLLEDRETQLRALREALEAGERS 60 + KNTS L +H++ F++ + AGRY +AS+V+R+ LRLLE++E +L LR LE GERS Sbjct 1 MSKNTSVSLGDHFAEFVEDRVRAGRYSTASDVVRAGLRLLEEQEAKLDVLRVELEKGERS 60 Query 61 GSSTPFDFDGFLGRKRADAS 80 G S PFDFD FL RKR A+ Sbjct 61 GQSRPFDFDAFLARKRKSAT 80 >gi|218677950|ref|ZP_03525847.1| putative addiction module antidote protein, CopG/Arc/MetJ family [Rhizobium etli CIAT 894] Length=79 Score = 89.7 bits (221), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 41/74 (56%), Positives = 57/74 (78%), Gaps = 0/74 (0%) Query 4 NTSFVLDEHYSAFIDGEIAAGRYRSASEVIRSALRLLEDRETQLRALREALEAGERSGSS 63 NTS L +H+ +FID ++ AGRY SA++V+R+ LRLLE+ E +++AL++AL GE SG + Sbjct 1 NTSISLSDHFVSFIDTQVQAGRYGSATDVVRAGLRLLEEHEAKVKALQDALIEGEESGPA 60 Query 64 TPFDFDGFLGRKRA 77 TPFDFD F RKRA Sbjct 61 TPFDFDAFNARKRA 74 >gi|167587204|ref|ZP_02379592.1| putative addiction module antidote protein, CopG/Arc/MetJ family [Burkholderia ubonensis Bu] Length=91 Score = 89.7 bits (221), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 41/77 (54%), Positives = 57/77 (75%), Gaps = 0/77 (0%) Query 1 VGKNTSFVLDEHYSAFIDGEIAAGRYRSASEVIRSALRLLEDRETQLRALREALEAGERS 60 + NT L +H++ F+D ++ +GRY SAS+V+R+ LRLLE ETQ+RAL+EAL+AGE S Sbjct 11 MSSNTPISLGDHFAEFVDAQVRSGRYGSASDVVRAGLRLLESHETQVRALQEALKAGETS 70 Query 61 GSSTPFDFDGFLGRKRA 77 G+ PF+ D FL R RA Sbjct 71 GAPAPFNSDAFLARMRA 87 >gi|154251166|ref|YP_001411990.1| CopG/Arc/MetJ family transcriptional regulator [Parvibaculum lavamentivorans DS-1] gi|154155116|gb|ABS62333.1| putative transcriptional regulator, CopG/Arc/MetJ family [Parvibaculum lavamentivorans DS-1] Length=89 Score = 89.0 bits (219), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 43/81 (54%), Positives = 60/81 (75%), Gaps = 0/81 (0%) Query 1 VGKNTSFVLDEHYSAFIDGEIAAGRYRSASEVIRSALRLLEDRETQLRALREALEAGERS 60 + KNTS L +H++ F++ +A GRY SASEV+R+ALRLLE+ E ++ ALR AL AGE+S Sbjct 9 MAKNTSISLGDHFNDFVESRVARGRYGSASEVVRAALRLLEEHEAKVEALRAALIAGEQS 68 Query 61 GSSTPFDFDGFLGRKRADASR 81 G S+PFDFD F+ K+ S+ Sbjct 69 GPSSPFDFDDFIREKQTSRSK 89 >gi|304312697|ref|YP_003812295.1| Uncharacterized protein family (UPF0156) [gamma proteobacterium HdN1] gi|301798430|emb|CBL46655.1| Uncharacterized protein family (UPF0156) [gamma proteobacterium HdN1] Length=85 Score = 87.4 bits (215), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 40/75 (54%), Positives = 56/75 (75%), Gaps = 0/75 (0%) Query 3 KNTSFVLDEHYSAFIDGEIAAGRYRSASEVIRSALRLLEDRETQLRALREALEAGERSGS 62 +NTS L +H++ FID ++ GRY SAS+V+R+ LRLLE+ ET+++AL++AL AG SG Sbjct 2 RNTSVSLGQHFTNFIDSQVQGGRYGSASDVVRAGLRLLEEHETKVKALQDALNAGLESGE 61 Query 63 STPFDFDGFLGRKRA 77 PFDF+ F RKRA Sbjct 62 PRPFDFEAFKARKRA 76 >gi|115360824|ref|YP_777961.1| CopG/Arc/MetJ family transcriptional regulator [Burkholderia ambifaria AMMD] gi|115286152|gb|ABI91627.1| putative transcriptional regulator, CopG/Arc/MetJ family [Burkholderia ambifaria AMMD] Length=81 Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 42/76 (56%), Positives = 57/76 (75%), Gaps = 0/76 (0%) Query 1 VGKNTSFVLDEHYSAFIDGEIAAGRYRSASEVIRSALRLLEDRETQLRALREALEAGERS 60 + +NTS L +H + F+D ++A+GRY SAS+V+R+ LRLLE +ET+LRAL+EAL+AGE S Sbjct 1 MARNTSISLGDHLAQFVDTQVASGRYGSASDVVRAGLRLLETQETELRALQEALKAGEAS 60 Query 61 GSSTPFDFDGFLGRKR 76 G T FD FL R R Sbjct 61 GEPTAFDSQAFLERMR 76 >gi|78066268|ref|YP_369037.1| transcriptional regulator [Burkholderia sp. 383] gi|77967013|gb|ABB08393.1| putative transcriptional regulators, CopG/Arc/MetJ DNA-binding domain protein [Burkholderia sp. 383] Length=106 Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 43/84 (52%), Positives = 60/84 (72%), Gaps = 3/84 (3%) Query 1 VGKNTSFVLDEHYSAFIDGEIAAGRYRSASEVIRSALRLLEDRETQLRALREALEAGERS 60 + +NTS L +H++ F+D ++ +G+Y SAS+VIR LR LE ETQ+RAL+EAL+AG+ S Sbjct 1 MSRNTSVSLGDHFAEFVDAQVQSGQYGSASDVIRVGLRFLESHETQMRALQEALQAGDAS 60 Query 61 GSS---TPFDFDGFLGRKRADASR 81 G+S PFD + FL R RA SR Sbjct 61 GASGAPEPFDSEAFLARMRATHSR 84 >gi|330814727|ref|YP_004362902.1| Putative transcriptional regulator, CopG/Arc/MetJ family protein [Burkholderia gladioli BSR3] gi|327374719|gb|AEA66070.1| Putative transcriptional regulator, CopG/Arc/MetJ family protein [Burkholderia gladioli BSR3] Length=82 Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 42/75 (56%), Positives = 56/75 (75%), Gaps = 0/75 (0%) Query 3 KNTSFVLDEHYSAFIDGEIAAGRYRSASEVIRSALRLLEDRETQLRALREALEAGERSGS 62 +NTS L +H + F+D ++A+GRY SAS+V+R+ LRLLE +ET+LRAL+EAL AGE SG+ Sbjct 4 RNTSISLGDHLTQFVDSQVASGRYGSASDVVRAGLRLLETQETELRALQEALRAGEASGT 63 Query 63 STPFDFDGFLGRKRA 77 FD FL R RA Sbjct 64 PAVFDGQAFLARLRA 78 >gi|167644951|ref|YP_001682614.1| CopG/Arc/MetJ family addiction module antidote protein [Caulobacter sp. K31] gi|167347381|gb|ABZ70116.1| putative addiction module antidote protein, CopG/Arc/MetJ family [Caulobacter sp. K31] Length=83 Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 43/75 (58%), Positives = 55/75 (74%), Gaps = 0/75 (0%) Query 1 VGKNTSFVLDEHYSAFIDGEIAAGRYRSASEVIRSALRLLEDRETQLRALREALEAGERS 60 + KNTS L +H+ FI+G+I+ GRY SASEV+R+ LRLLE+RET+L ALR AL GE S Sbjct 1 MSKNTSISLGDHFQTFIEGQISDGRYGSASEVVRAGLRLLEERETRLAALRAALIEGEES 60 Query 61 GSSTPFDFDGFLGRK 75 G + FDFD F+ K Sbjct 61 GFAEDFDFDAFIAEK 75 >gi|170700268|ref|ZP_02891282.1| putative addiction module antidote protein, CopG/Arc/MetJ family [Burkholderia ambifaria IOP40-10] gi|170134805|gb|EDT03119.1| putative addiction module antidote protein, CopG/Arc/MetJ family [Burkholderia ambifaria IOP40-10] Length=81 Score = 85.5 bits (210), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 41/77 (54%), Positives = 57/77 (75%), Gaps = 0/77 (0%) Query 1 VGKNTSFVLDEHYSAFIDGEIAAGRYRSASEVIRSALRLLEDRETQLRALREALEAGERS 60 + +NTS L +H + F+D ++A+GRY SAS+V+R+ LRLLE +ET+L+AL+EAL+AGE S Sbjct 1 MARNTSISLGDHLTQFVDTQVASGRYGSASDVVRAGLRLLETQETELQALQEALKAGEAS 60 Query 61 GSSTPFDFDGFLGRKRA 77 G FD FL R RA Sbjct 61 GEPAAFDSRAFLARMRA 77 >gi|328542990|ref|YP_004303099.1| CopG-like protein [Polymorphum gilvum SL003B-26A1] gi|326412736|gb|ADZ69799.1| CopG-like protein [Polymorphum gilvum SL003B-26A1] Length=78 Score = 84.7 bits (208), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 41/78 (53%), Positives = 55/78 (71%), Gaps = 0/78 (0%) Query 1 VGKNTSFVLDEHYSAFIDGEIAAGRYRSASEVIRSALRLLEDRETQLRALREALEAGERS 60 + +NTS L +H++ F+D + GRY SAS+V+R+ LRLLE+ ET++ ALR ALEAGE S Sbjct 1 MARNTSISLGDHFADFVDQRVKTGRYGSASDVVRAGLRLLEEHETRMDALRAALEAGEAS 60 Query 61 GSSTPFDFDGFLGRKRAD 78 G FDFD FL K +D Sbjct 61 GEPKDFDFDTFLAHKTSD 78 >gi|269124271|ref|YP_003305340.1| CopG-like protein [Paracoccus aminophilus] gi|266705981|gb|ACY78318.1| CopG-like protein [Paracoccus aminophilus] Length=82 Score = 84.3 bits (207), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 39/78 (50%), Positives = 56/78 (72%), Gaps = 0/78 (0%) Query 1 VGKNTSFVLDEHYSAFIDGEIAAGRYRSASEVIRSALRLLEDRETQLRALREALEAGERS 60 + +NTS L +H++ FID ++ AGRY SAS+V+R+ LRLL++ E +++AL AL GE S Sbjct 1 MARNTSVSLGDHFTTFIDTQVQAGRYGSASDVVRAGLRLLQEHEAKVKALEAALIEGEES 60 Query 61 GSSTPFDFDGFLGRKRAD 78 G PFDF+ F RKRA+ Sbjct 61 GEPQPFDFEAFKKRKRAE 78 >gi|222085619|ref|YP_002544149.1| hypothetical protein Arad_1900 [Agrobacterium radiobacter K84] gi|221723067|gb|ACM26223.1| conserved hypothetical protein [Agrobacterium radiobacter K84] Length=81 Score = 84.3 bits (207), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 40/77 (52%), Positives = 55/77 (72%), Gaps = 0/77 (0%) Query 1 VGKNTSFVLDEHYSAFIDGEIAAGRYRSASEVIRSALRLLEDRETQLRALREALEAGERS 60 + +NTS L +H++ FID ++ GRY SAS+V+R+ LRLLE+ E +++AL+ AL AGE S Sbjct 1 MARNTSVSLGDHFNTFIDAQVQTGRYGSASDVVRAGLRLLEEHEAKVKALQGALIAGEES 60 Query 61 GSSTPFDFDGFLGRKRA 77 G TPFD FL R RA Sbjct 61 GKPTPFDNAAFLKRMRA 77 >gi|343083581|ref|YP_004772876.1| addiction module antidote protein [Cyclobacterium marinum DSM 745] gi|342352115|gb|AEL24645.1| addiction module antidote protein, CC2985 family [Cyclobacterium marinum DSM 745] Length=81 Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 42/81 (52%), Positives = 55/81 (68%), Gaps = 0/81 (0%) Query 1 VGKNTSFVLDEHYSAFIDGEIAAGRYRSASEVIRSALRLLEDRETQLRALREALEAGERS 60 + KNTS L EH+ + I+ IA+GRY SASEVIR+ LR +E+ E ++ AL+EA+EAGE S Sbjct 1 MAKNTSITLGEHFESIIEKSIASGRYASASEVIRAGLRKIEEEEQKITALKEAIEAGENS 60 Query 61 GSSTPFDFDGFLGRKRADASR 81 G T FD FL R A S+ Sbjct 61 GYITDFDPKEFLERMHAKHSK 81 >gi|295690769|ref|YP_003594462.1| addiction module antidote protein [Caulobacter segnis ATCC 21756] gi|295432672|gb|ADG11844.1| putative addiction module antidote protein, CopG/Arc/MetJ family [Caulobacter segnis ATCC 21756] Length=83 Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 41/78 (53%), Positives = 50/78 (65%), Gaps = 0/78 (0%) Query 1 VGKNTSFVLDEHYSAFIDGEIAAGRYRSASEVIRSALRLLEDRETQLRALREALEAGERS 60 + KNTS VL EH+ +FI ++ GRY SASEV+R+ LRLLED E +L ALR A+ G S Sbjct 1 MSKNTSIVLSEHFQSFITEKVEEGRYGSASEVVRAGLRLLEDHEAKLTALRTAVREGFES 60 Query 61 GSSTPFDFDGFLGRKRAD 78 G PFD D FL D Sbjct 61 GKPEPFDVDTFLAEVNTD 78 >gi|238025683|ref|YP_002909915.1| CopG/Arc/MetJ family transcriptional regulator [Burkholderia glumae BGR1] gi|237880348|gb|ACR32679.1| CopG/Arc/MetJ family transcriptional regulator [Burkholderia glumae BGR1] Length=81 Score = 82.4 bits (202), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 40/75 (54%), Positives = 55/75 (74%), Gaps = 0/75 (0%) Query 3 KNTSFVLDEHYSAFIDGEIAAGRYRSASEVIRSALRLLEDRETQLRALREALEAGERSGS 62 +NTS L +H + F+D ++A+GRY SAS+V+R+ LRLLE +ET+L+AL+EAL A E SG+ Sbjct 3 RNTSISLGDHLTQFVDTQVASGRYGSASDVVRAGLRLLETQETELKALKEALRASEASGA 62 Query 63 STPFDFDGFLGRKRA 77 FD FL R RA Sbjct 63 PAAFDGQAFLDRMRA 77 >gi|50955360|ref|YP_062648.1| hypothetical protein Lxx18000 [Leifsonia xyli subsp. xyli str. CTCB07] gi|50951842|gb|AAT89543.1| conserved hypothetical protein [Leifsonia xyli subsp. xyli str. CTCB07] Length=77 Score = 82.4 bits (202), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 45/77 (59%), Positives = 59/77 (77%), Gaps = 0/77 (0%) Query 1 VGKNTSFVLDEHYSAFIDGEIAAGRYRSASEVIRSALRLLEDRETQLRALREALEAGERS 60 + +NTS LD+H+S F+ E+++GRYRSASEV+R+ LRLLED+ETQL ALR AL AGE S Sbjct 1 MAQNTSISLDDHFSDFLSKEVSSGRYRSASEVVRAGLRLLEDQETQLAALRAALVAGEAS 60 Query 61 GSSTPFDFDGFLGRKRA 77 G FDFD F+ K++ Sbjct 61 GMPEAFDFDAFIAMKKS 77 >gi|262163636|ref|ZP_06031378.1| predicted transcriptional regulator [Vibrio mimicus VM223] gi|262027942|gb|EEY46605.1| predicted transcriptional regulator [Vibrio mimicus VM223] Length=80 Score = 81.3 bits (199), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 41/81 (51%), Positives = 58/81 (72%), Gaps = 1/81 (1%) Query 1 VGKNTSFVLDEHYSAFIDGEIAAGRYRSASEVIRSALRLLEDRETQLRALREALEAGERS 60 + KNTS L EH+ FI +I +GRY SASEVIRSALRLLE++ET+L++LR+ L GE+S Sbjct 1 MAKNTSITLGEHFDGFITSQIQSGRYGSASEVIRSALRLLENQETKLQSLRQLLVEGEQS 60 Query 61 GSSTPFDFDGFLGRKRADASR 81 G + +D D F+ +++ R Sbjct 61 GDA-DYDLDSFINELDSESIR 80 >gi|83956447|ref|ZP_00964868.1| hypothetical protein NAS141_01056 [Sulfitobacter sp. NAS-14.1] gi|83839332|gb|EAP78519.1| hypothetical protein NAS141_01056 [Sulfitobacter sp. NAS-14.1] Length=85 Score = 80.9 bits (198), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 40/75 (54%), Positives = 55/75 (74%), Gaps = 0/75 (0%) Query 3 KNTSFVLDEHYSAFIDGEIAAGRYRSASEVIRSALRLLEDRETQLRALREALEAGERSGS 62 +NTS L H+S FI ++ AGRY SAS+V+R+ LRLLE+ ET++RAL++AL AGE+SG+ Sbjct 3 RNTSVTLGTHFSDFIGEQVQAGRYGSASDVVRAGLRLLEEHETKVRALQDALIAGEQSGT 62 Query 63 STPFDFDGFLGRKRA 77 FD + FL R A Sbjct 63 PRSFDSEAFLSRMHA 77 >gi|121586008|ref|ZP_01675800.1| putative addiction module antidote protein, family [Vibrio cholerae 2740-80] gi|153803260|ref|ZP_01957846.1| putative addiction module antidote protein, family [Vibrio cholerae MZO-3] gi|153825863|ref|ZP_01978530.1| putative addiction module antidote protein, family [Vibrio cholerae MZO-2] 13 more sequence titles Length=80 Score = 80.9 bits (198), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 40/73 (55%), Positives = 54/73 (74%), Gaps = 1/73 (1%) Query 1 VGKNTSFVLDEHYSAFIDGEIAAGRYRSASEVIRSALRLLEDRETQLRALREALEAGERS 60 + KNTS L EH+ FI +I +GRY SASEVIRSALRLLE++ET+L++LR+ L GE+S Sbjct 1 MAKNTSITLGEHFDGFITSQIQSGRYGSASEVIRSALRLLENQETKLQSLRQLLVEGEQS 60 Query 61 GSSTPFDFDGFLG 73 G + +D D F+ Sbjct 61 GDA-DYDLDSFIN 72 >gi|71276108|ref|ZP_00652388.1| Protein of unknown function UPF0156, bacterial [Xylella fastidiosa Dixon] gi|71902439|ref|ZP_00684386.1| Protein of unknown function UPF0156, bacterial [Xylella fastidiosa Ann-1] gi|170730668|ref|YP_001776101.1| CopG/Arc/MetJ family transcriptional regulator [Xylella fastidiosa M12] gi|71163026|gb|EAO12748.1| Protein of unknown function UPF0156, bacterial [Xylella fastidiosa Dixon] gi|71727835|gb|EAO30081.1| Protein of unknown function UPF0156, bacterial [Xylella fastidiosa Ann-1] gi|167965461|gb|ACA12471.1| putative transcriptional regulator, CopG/Arc/MetJ family [Xylella fastidiosa M12] Length=80 Score = 80.9 bits (198), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 35/74 (48%), Positives = 54/74 (73%), Gaps = 0/74 (0%) Query 1 VGKNTSFVLDEHYSAFIDGEIAAGRYRSASEVIRSALRLLEDRETQLRALREALEAGERS 60 + +NTS L H+++FID ++ GRY +AS+V+R+ LRLLE+ ET+++AL++AL G +S Sbjct 1 MSRNTSVALGPHFTSFIDAQVQGGRYGTASDVVRAGLRLLEEHETKVKALQDALNVGHQS 60 Query 61 GSSTPFDFDGFLGR 74 G PFD + FL R Sbjct 61 GEPRPFDSEVFLSR 74 >gi|119386537|ref|YP_917592.1| CopG/Arc/MetJ family transcriptional regulator [Paracoccus denitrificans PD1222] gi|340029107|ref|ZP_08665170.1| CopG/Arc/MetJ family transcriptional regulator [Paracoccus sp. TRP] gi|119377132|gb|ABL71896.1| putative transcriptional regulator, CopG/Arc/MetJ family [Paracoccus denitrificans PD1222] Length=81 Score = 80.9 bits (198), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 38/77 (50%), Positives = 56/77 (73%), Gaps = 0/77 (0%) Query 1 VGKNTSFVLDEHYSAFIDGEIAAGRYRSASEVIRSALRLLEDRETQLRALREALEAGERS 60 + +NTS L +H+ +FID ++ GRY SAS+V+R+ LRLLE+ E +++AL++AL AGE S Sbjct 1 MSRNTSVSLGDHFVSFIDAQVKGGRYGSASDVVRAGLRLLEEHEAKVKALQDALIAGEDS 60 Query 61 GSSTPFDFDGFLGRKRA 77 G + FD D F+ RK A Sbjct 61 GRAEGFDLDQFIARKMA 77 >gi|153828462|ref|ZP_01981129.1| putative addiction module antidote protein, family [Vibrio cholerae 623-39] gi|229514816|ref|ZP_04404277.1| hypothetical protein VCB_002468 [Vibrio cholerae TMA 21] gi|229526085|ref|ZP_04415489.1| hypothetical protein VCA_000193 [Vibrio cholerae bv. albensis VL426] 12 more sequence titles Length=80 Score = 80.5 bits (197), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 40/73 (55%), Positives = 54/73 (74%), Gaps = 1/73 (1%) Query 1 VGKNTSFVLDEHYSAFIDGEIAAGRYRSASEVIRSALRLLEDRETQLRALREALEAGERS 60 + KNTS L EH+ FI +I +GRY SASEVIRSALRLLE++ET+L++LR+ L GE+S Sbjct 1 MAKNTSITLGEHFDGFITSQIQSGRYGSASEVIRSALRLLENQETKLQSLRQLLIEGEQS 60 Query 61 GSSTPFDFDGFLG 73 G + +D D F+ Sbjct 61 GDA-DYDLDSFIN 72 >gi|327485504|gb|AEA79910.1| Predicted transcriptional regulator [Vibrio cholerae LMA3894-4] Length=80 Score = 80.5 bits (197), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 40/73 (55%), Positives = 54/73 (74%), Gaps = 1/73 (1%) Query 1 VGKNTSFVLDEHYSAFIDGEIAAGRYRSASEVIRSALRLLEDRETQLRALREALEAGERS 60 + KNTS L EH+ FI +I +GRY SASEVIRSALRLLE++ET+L++LR+ L GE+S Sbjct 1 MAKNTSITLGEHFDDFITSQIQSGRYGSASEVIRSALRLLENQETKLQSLRQLLVEGEQS 60 Query 61 GSSTPFDFDGFLG 73 G + +D D F+ Sbjct 61 GDA-DYDLDSFIN 72 >gi|289758069|ref|ZP_06517447.1| hypothetical protein TBEG_00747 [Mycobacterium tuberculosis T85] gi|289713633|gb|EFD77645.1| hypothetical protein TBEG_00747 [Mycobacterium tuberculosis T85] Length=40 Score = 80.1 bits (196), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 39/40 (98%), Positives = 40/40 (100%), Gaps = 0/40 (0%) Query 1 VGKNTSFVLDEHYSAFIDGEIAAGRYRSASEVIRSALRLL 40 +GKNTSFVLDEHYSAFIDGEIAAGRYRSASEVIRSALRLL Sbjct 1 MGKNTSFVLDEHYSAFIDGEIAAGRYRSASEVIRSALRLL 40 >gi|163850943|ref|YP_001638986.1| addiction module antidote protein [Methylobacterium extorquens PA1] gi|218529770|ref|YP_002420586.1| addiction module antidote protein, CopG/Arc/MetJ family [Methylobacterium chloromethanicum CM4] gi|254560635|ref|YP_003067730.1| hypothetical protein METDI2178 [Methylobacterium extorquens DM4] gi|163662548|gb|ABY29915.1| addiction module antidote protein, CC2985 family [Methylobacterium extorquens PA1] gi|218522073|gb|ACK82658.1| putative addiction module antidote protein, CopG/Arc/MetJ family [Methylobacterium chloromethanicum CM4] gi|254267913|emb|CAX23779.1| conserved hypothetical protein [Methylobacterium extorquens DM4] Length=82 Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 43/80 (54%), Positives = 53/80 (67%), Gaps = 0/80 (0%) Query 3 KNTSFVLDEHYSAFIDGEIAAGRYRSASEVIRSALRLLEDRETQLRALREALEAGERSGS 62 +NTS L EH++ FID ++ GRY SASEV+R+ LRLLE++E L LR AL GE SG Sbjct 3 RNTSVSLGEHFAQFIDRQVEGGRYGSASEVVRAGLRLLEEQEAALDTLRAALIEGEESGP 62 Query 63 STPFDFDGFLGRKRADASRG 82 FD + FL KRA A RG Sbjct 63 PELFDTEAFLREKRAGAIRG 82 >gi|188584325|ref|YP_001927770.1| CopG family transcriptional regulator [Methylobacterium populi BJ001] gi|179347823|gb|ACB83235.1| putative addiction module antidote protein, CopG/Arc/MetJ family [Methylobacterium populi BJ001] Length=81 Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 40/81 (50%), Positives = 54/81 (67%), Gaps = 0/81 (0%) Query 1 VGKNTSFVLDEHYSAFIDGEIAAGRYRSASEVIRSALRLLEDRETQLRALREALEAGERS 60 + +NTS L +H++ FID ++ GRY SAS+V+R+ LRLLE+RE +L ALR AL+ GE S Sbjct 1 MARNTSISLGDHFAQFIDSQVQGGRYGSASDVVRAGLRLLEEREAKLEALRSALDEGEAS 60 Query 61 GSSTPFDFDGFLGRKRADASR 81 G FD D FL R A + Sbjct 61 GDFQEFDADTFLASMRQPAGQ 81 >gi|119385124|ref|YP_916180.1| CopG/Arc/MetJ family transcriptional regulator [Paracoccus denitrificans PD1222] gi|119374891|gb|ABL70484.1| putative transcriptional regulator, CopG/Arc/MetJ family [Paracoccus denitrificans PD1222] Length=81 Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 37/77 (49%), Positives = 55/77 (72%), Gaps = 0/77 (0%) Query 1 VGKNTSFVLDEHYSAFIDGEIAAGRYRSASEVIRSALRLLEDRETQLRALREALEAGERS 60 + +NTS L +H+ +FID ++ GRY SAS+V+R+ LRLLE+ E +++AL++AL GE S Sbjct 1 MSRNTSVSLGDHFVSFIDAQVKGGRYGSASDVVRAGLRLLEEHEAKVKALQDALITGEDS 60 Query 61 GSSTPFDFDGFLGRKRA 77 G + FD D F+ RK A Sbjct 61 GRAEGFDLDQFIARKMA 77 >gi|262275568|ref|ZP_06053377.1| predicted transcriptional regulator [Grimontia hollisae CIP 101886] gi|262219376|gb|EEY70692.1| predicted transcriptional regulator [Grimontia hollisae CIP 101886] Length=81 Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 40/81 (50%), Positives = 58/81 (72%), Gaps = 1/81 (1%) Query 1 VGKNTSFVLDEHYSAFIDGEIAAGRYRSASEVIRSALRLLEDRETQLRALREALEAGERS 60 + KNTS L EH+ +FI +I +GRY SASEVIRSALRLLE++ET+L++LR+ L GE+S Sbjct 1 MAKNTSITLGEHFDSFITSQIQSGRYGSASEVIRSALRLLENQETKLQSLRQLLVEGEQS 60 Query 61 GSSTPFDFDGFLGRKRADASR 81 + +D D F+ ++ +R Sbjct 61 DDA-DYDIDSFVNELDSEENR 80 >gi|229523009|ref|ZP_04412421.1| hypothetical protein VIF_003577 [Vibrio cholerae TM 11079-80] gi|229339859|gb|EEO04869.1| hypothetical protein VIF_003577 [Vibrio cholerae TM 11079-80] Length=80 Score = 77.8 bits (190), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 39/73 (54%), Positives = 51/73 (70%), Gaps = 1/73 (1%) Query 1 VGKNTSFVLDEHYSAFIDGEIAAGRYRSASEVIRSALRLLEDRETQLRALREALEAGERS 60 + KNTS L +H+ FI +I +GRY SASEVIRSALRLLE +ET++ LR+ L AGE S Sbjct 1 MAKNTSITLGDHFDGFIANQIQSGRYGSASEVIRSALRLLETQETKMNTLRQLLVAGEES 60 Query 61 GSSTPFDFDGFLG 73 G + +D D F+ Sbjct 61 GVA-DYDLDSFIN 72 >gi|15838662|ref|NP_299350.1| hypothetical protein XF2071 [Xylella fastidiosa 9a5c] gi|14195572|sp|Q9PBR9.1|PARD_XYLFA RecName: Full=Antitoxin ParD gi|9107191|gb|AAF84870.1|AE004023_6 conserved hypothetical protein [Xylella fastidiosa 9a5c] Length=80 Score = 77.0 bits (188), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 34/74 (46%), Positives = 53/74 (72%), Gaps = 0/74 (0%) Query 1 VGKNTSFVLDEHYSAFIDGEIAAGRYRSASEVIRSALRLLEDRETQLRALREALEAGERS 60 + +NTS L H+++FID ++ GRY +AS+V+R+ LRLLE+ ET+++AL++AL +S Sbjct 1 MSRNTSVALGPHFTSFIDAQVQGGRYGTASDVVRAGLRLLEEHETKVKALQDALNVRHQS 60 Query 61 GSSTPFDFDGFLGR 74 G PFD + FL R Sbjct 61 GEPRPFDSEVFLSR 74 >gi|338849229|gb|AEJ27440.1| ParD protein [Paracoccus denitrificans SD1] Length=81 Score = 77.0 bits (188), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 36/75 (48%), Positives = 54/75 (72%), Gaps = 0/75 (0%) Query 1 VGKNTSFVLDEHYSAFIDGEIAAGRYRSASEVIRSALRLLEDRETQLRALREALEAGERS 60 + +NTS L +H+ +FID ++ GRY SAS+V+R+ LRLLE+ E +++AL++AL AGE Sbjct 1 MSRNTSVSLGDHFVSFIDAQVKGGRYGSASDVVRAGLRLLEEHEAKVKALQDALIAGEDF 60 Query 61 GSSTPFDFDGFLGRK 75 G + FD D F+ RK Sbjct 61 GRAEGFDLDQFIARK 75 >gi|343503259|ref|ZP_08741085.1| transcriptional regulator [Vibrio tubiashii ATCC 19109] gi|342812063|gb|EGU47083.1| transcriptional regulator [Vibrio tubiashii ATCC 19109] Length=80 Score = 76.6 bits (187), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 37/73 (51%), Positives = 51/73 (70%), Gaps = 1/73 (1%) Query 1 VGKNTSFVLDEHYSAFIDGEIAAGRYRSASEVIRSALRLLEDRETQLRALREALEAGERS 60 + KNTS L +H+ FI ++ +GRY SASEVIRSALRLLE +ET++ LR+ L GE S Sbjct 1 MAKNTSITLGDHFDVFIANQVQSGRYGSASEVIRSALRLLETQETKMNTLRQLLVEGEES 60 Query 61 GSSTPFDFDGFLG 73 G++ +D D F+ Sbjct 61 GTA-DYDLDSFIN 72 Lambda K H 0.318 0.134 0.366 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 127525940264 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40