BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv1962A
Length=90
Score E
Sequences producing significant alignments: (Bits) Value
gi|15841434|ref|NP_336471.1| hypothetical protein MT2013 [Mycoba... 176 7e-43
gi|289570050|ref|ZP_06450277.1| conserved hypothetical protein [... 170 5e-41
gi|296169437|ref|ZP_06851058.1| prevent-host-death family antito... 131 3e-29
gi|340532620|gb|AEK47825.1| hypothetical protein RAM_46800 [Amyc... 101 4e-20
gi|300790924|ref|YP_003771215.1| hypothetical protein AMED_9124 ... 95.9 2e-18
gi|336178643|ref|YP_004584018.1| prevent-host-death family prote... 89.4 1e-16
gi|302864893|ref|YP_003833530.1| prevent-host-death family prote... 63.5 1e-08
gi|288917439|ref|ZP_06411805.1| prevent-host-death family protei... 61.2 5e-08
gi|111220043|ref|YP_710837.1| hypothetical protein FRAAL0553 [Fr... 50.8 7e-05
gi|296166225|ref|ZP_06848664.1| prevent-host-death family antito... 50.1 1e-04
gi|269978025|ref|ZP_06184975.1| toxin-antitoxin system, antitoxi... 50.1 1e-04
gi|294995819|ref|ZP_06801510.1| antitoxin [Mycobacterium tubercu... 50.1 1e-04
gi|15610543|ref|NP_217924.1| hypothetical protein Rv3407 [Mycoba... 49.7 1e-04
gi|284992147|ref|YP_003410701.1| prevent-host-death family prote... 49.3 2e-04
gi|336179975|ref|YP_004585350.1| prevent-host-death family prote... 48.9 2e-04
gi|308232454|ref|ZP_07416084.2| antitoxin [Mycobacterium tubercu... 48.9 2e-04
gi|256372389|ref|YP_003110213.1| prevent-host-death family prote... 47.8 6e-04
gi|240170729|ref|ZP_04749388.1| hypothetical protein MkanA1_1554... 47.4 8e-04
gi|284041683|ref|YP_003392023.1| prevent-host-death family prote... 46.6 0.001
gi|297570944|ref|YP_003696718.1| prevent-host-death family prote... 46.2 0.002
gi|336178691|ref|YP_004584066.1| prevent-host-death family prote... 46.2 0.002
gi|284029010|ref|YP_003378941.1| prevent-host-death family prote... 45.8 0.002
gi|108802492|ref|YP_642688.1| prevent-host-death protein [Mycoba... 45.4 0.003
gi|284989379|ref|YP_003407933.1| prevent-host-death family prote... 45.1 0.003
gi|312198894|ref|YP_004018955.1| prevent-host-death family prote... 43.9 0.008
gi|330465108|ref|YP_004402851.1| prevent-host-death family prote... 43.5 0.011
gi|271962908|ref|YP_003337104.1| hypothetical protein Sros_1366 ... 43.1 0.012
gi|336176938|ref|YP_004582313.1| prevent-host-death family prote... 42.0 0.028
gi|120402716|ref|YP_952545.1| prevent-host-death family protein ... 40.8 0.066
gi|343918886|gb|EGV29645.1| prevent-host-death family protein [T... 40.4 0.077
gi|344201299|ref|YP_004785625.1| prevent-host-death family prote... 39.3 0.17
gi|158521793|ref|YP_001529663.1| prevent-host-death family prote... 39.3 0.17
gi|344340184|ref|ZP_08771110.1| prevent-host-death family protei... 39.3 0.20
gi|254420356|ref|ZP_05034080.1| prevent-host-death family protei... 39.3 0.22
gi|294629003|ref|ZP_06707563.1| conserved hypothetical protein [... 38.9 0.25
gi|148264443|ref|YP_001231149.1| prevent-host-death family prote... 38.1 0.43
gi|284044420|ref|YP_003394760.1| prevent-host-death family prote... 37.7 0.50
gi|88812277|ref|ZP_01127528.1| hypothetical protein NB231_02718 ... 37.4 0.73
gi|301064252|ref|ZP_07204695.1| toxin-antitoxin system, antitoxi... 37.0 0.91
gi|334118132|ref|ZP_08492222.1| prevent-host-death family protei... 37.0 1.1
gi|334131960|ref|ZP_08505722.1| Prevent-host-death family protei... 36.6 1.1
gi|344340342|ref|ZP_08771268.1| prevent-host-death family protei... 36.6 1.2
gi|269957801|ref|YP_003327590.1| prevent-host-death family prote... 36.6 1.3
gi|88810220|ref|ZP_01125477.1| hypothetical protein NB231_14108 ... 36.2 1.6
gi|255020444|ref|ZP_05292510.1| hypothetical protein ACA_1854 [A... 36.2 1.7
gi|255579005|ref|XP_002530354.1| conserved hypothetical protein ... 36.2 1.7
gi|147678885|ref|YP_001213100.1| hypothetical protein PTH_2550 [... 36.2 1.8
gi|334337552|ref|YP_004542704.1| prevent-host-death family prote... 36.2 1.8
gi|333978033|ref|YP_004515978.1| prevent-host-death family prote... 35.8 1.9
gi|124515562|gb|EAY57072.1| Prevent-host-death protein [Leptospi... 35.8 2.2
>gi|15841434|ref|NP_336471.1| hypothetical protein MT2013 [Mycobacterium tuberculosis CDC1551]
gi|121637868|ref|YP_978091.1| antitoxin [Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|148661770|ref|YP_001283293.1| hypothetical protein MRA_1972 [Mycobacterium tuberculosis H37Ra]
64 more sequence titles
Length=90
Score = 176 bits (447), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 89/90 (99%), Positives = 90/90 (100%), Gaps = 0/90 (0%)
Query 1 VNEVSIRTLNQETSKVLARVKRGEEINLTERGKVIARIIPASAGPLDSLISTGSVQPARV 60
+NEVSIRTLNQETSKVLARVKRGEEINLTERGKVIARIIPASAGPLDSLISTGSVQPARV
Sbjct 1 MNEVSIRTLNQETSKVLARVKRGEEINLTERGKVIARIIPASAGPLDSLISTGSVQPARV 60
Query 61 HGPAPRPTIPMRGGLDSGTLLERMRAEERY 90
HGPAPRPTIPMRGGLDSGTLLERMRAEERY
Sbjct 61 HGPAPRPTIPMRGGLDSGTLLERMRAEERY 90
>gi|289570050|ref|ZP_06450277.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
gi|289750545|ref|ZP_06509923.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
gi|289543804|gb|EFD47452.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
gi|289691132|gb|EFD58561.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
Length=87
Score = 170 bits (431), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 86/87 (99%), Positives = 87/87 (100%), Gaps = 0/87 (0%)
Query 4 VSIRTLNQETSKVLARVKRGEEINLTERGKVIARIIPASAGPLDSLISTGSVQPARVHGP 63
+SIRTLNQETSKVLARVKRGEEINLTERGKVIARIIPASAGPLDSLISTGSVQPARVHGP
Sbjct 1 MSIRTLNQETSKVLARVKRGEEINLTERGKVIARIIPASAGPLDSLISTGSVQPARVHGP 60
Query 64 APRPTIPMRGGLDSGTLLERMRAEERY 90
APRPTIPMRGGLDSGTLLERMRAEERY
Sbjct 61 APRPTIPMRGGLDSGTLLERMRAEERY 87
>gi|296169437|ref|ZP_06851058.1| prevent-host-death family antitoxin [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295895906|gb|EFG75600.1| prevent-host-death family antitoxin [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=83
Score = 131 bits (330), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 63/82 (77%), Positives = 73/82 (90%), Gaps = 0/82 (0%)
Query 9 LNQETSKVLARVKRGEEINLTERGKVIARIIPASAGPLDSLISTGSVQPARVHGPAPRPT 68
LNQET+KVLARVKRGEEI LTERG+VIARIIPA+AGPLD+LI+ G VQPA + GPAPRPT
Sbjct 2 LNQETAKVLARVKRGEEITLTERGEVIARIIPATAGPLDALITAGRVQPATLAGPAPRPT 61
Query 69 IPMRGGLDSGTLLERMRAEERY 90
+PM LD+G LL+R+RAEERY
Sbjct 62 VPMHDNLDAGALLQRLRAEERY 83
>gi|340532620|gb|AEK47825.1| hypothetical protein RAM_46800 [Amycolatopsis mediterranei S699]
Length=90
Score = 101 bits (251), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 47/90 (53%), Positives = 68/90 (76%), Gaps = 0/90 (0%)
Query 1 VNEVSIRTLNQETSKVLARVKRGEEINLTERGKVIARIIPASAGPLDSLISTGSVQPARV 60
+N+V +R LNQ+T+ VLARVK GE++ +TERG VIARI+PA P+ +LI++G + PA V
Sbjct 1 MNQVGVRELNQDTAGVLARVKAGEDVEITERGTVIARIVPAQPSPVSALIASGKLHPASV 60
Query 61 HGPAPRPTIPMRGGLDSGTLLERMRAEERY 90
+GP PRP P+R L++G L+ +R +ERY
Sbjct 61 NGPMPRPHGPVRTDLEAGELVRELRDDERY 90
>gi|300790924|ref|YP_003771215.1| hypothetical protein AMED_9124 [Amycolatopsis mediterranei U32]
gi|299800438|gb|ADJ50813.1| conserved hypothetical protein [Amycolatopsis mediterranei U32]
Length=85
Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/85 (53%), Positives = 64/85 (76%), Gaps = 0/85 (0%)
Query 6 IRTLNQETSKVLARVKRGEEINLTERGKVIARIIPASAGPLDSLISTGSVQPARVHGPAP 65
+R LNQ+T+ VLARVK GE++ +TERG VIARI+PA P+ +LI++G + PA V+GP P
Sbjct 1 MRELNQDTAGVLARVKAGEDVEITERGTVIARIVPAQPSPVSALIASGKLHPASVNGPMP 60
Query 66 RPTIPMRGGLDSGTLLERMRAEERY 90
RP P+R L++G L+ +R +ERY
Sbjct 61 RPHGPVRTDLEAGELVRELRDDERY 85
>gi|336178643|ref|YP_004584018.1| prevent-host-death family protein [Frankia symbiont of Datisca
glomerata]
gi|334859623|gb|AEH10097.1| prevent-host-death family protein [Frankia symbiont of Datisca
glomerata]
Length=112
Score = 89.4 bits (220), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/90 (50%), Positives = 62/90 (69%), Gaps = 0/90 (0%)
Query 1 VNEVSIRTLNQETSKVLARVKRGEEINLTERGKVIARIIPASAGPLDSLISTGSVQPARV 60
V +V IR LNQ+T+ VLARV+RGE I +T G+VI RI+PA++G LD LI+ G V PA +
Sbjct 23 VEQVPIRVLNQDTAGVLARVERGETIEITRHGRVIGRIVPATSGELDDLIAAGKVSPATI 82
Query 61 HGPAPRPTIPMRGGLDSGTLLERMRAEERY 90
GP P P G ++G L+ ++R EER+
Sbjct 83 TGPFTAPKGPRISGPEAGELIRQLRDEERW 112
>gi|302864893|ref|YP_003833530.1| prevent-host-death family protein [Micromonospora aurantiaca
ATCC 27029]
gi|315501179|ref|YP_004080066.1| prevent-host-death family protein [Micromonospora sp. L5]
gi|302567752|gb|ADL43954.1| prevent-host-death family protein [Micromonospora aurantiaca
ATCC 27029]
gi|315407798|gb|ADU05915.1| prevent-host-death family protein [Micromonospora sp. L5]
Length=92
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/92 (39%), Positives = 54/92 (59%), Gaps = 2/92 (2%)
Query 1 VNEVSIRTLNQETSKVLARVKRGEEINLTERGKVIARIIPASAGP--LDSLISTGSVQPA 58
+ ++++R LNQ TS+VLARV+ GE + +T+RG+ IAR++P AG L L++ G
Sbjct 1 MEQIAVRELNQHTSRVLARVRAGETVEVTDRGEPIARLVPVLAGDALLGRLVAEGRATAP 60
Query 59 RVHGPAPRPTIPMRGGLDSGTLLERMRAEERY 90
GP P P + +D+ L R EER+
Sbjct 61 TTTGPVPMPPVLGDPTVDAAAALVEARDEERW 92
>gi|288917439|ref|ZP_06411805.1| prevent-host-death family protein [Frankia sp. EUN1f]
gi|288351142|gb|EFC85353.1| prevent-host-death family protein [Frankia sp. EUN1f]
Length=98
Score = 61.2 bits (147), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/92 (39%), Positives = 53/92 (58%), Gaps = 2/92 (2%)
Query 1 VNEVSIRTLNQETSKVLARVKRGEEINLTERGKVIARIIPASAG--PLDSLISTGSVQPA 58
++ V +R LNQ TS+V+ RV+ GE I +T+RG+ +AR++P G LD L++ G P
Sbjct 7 MDRVGVRELNQNTSQVIDRVRHGETIEVTDRGRPVARLVPIGRGTAALDRLVAEGRAIPP 66
Query 59 RVHGPAPRPTIPMRGGLDSGTLLERMRAEERY 90
GP P P + + + L MR EER+
Sbjct 67 VTGGPVPMPPLLGSPSVSATDELIAMRDEERW 98
>gi|111220043|ref|YP_710837.1| hypothetical protein FRAAL0553 [Frankia alni ACN14a]
gi|111147575|emb|CAJ59228.1| conserved hypothetical protein [Frankia alni ACN14a]
Length=87
Score = 50.8 bits (120), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/72 (38%), Positives = 43/72 (60%), Gaps = 7/72 (9%)
Query 4 VSIRTLNQETSKVLARVKRGEEINLTERGKVIARIIPASAGPLDSLI-------STGSVQ 56
+ +R L+Q T+KVLA V+ G + +T+RG+++ARI+PA + L+ +TG
Sbjct 1 MGMRELSQRTAKVLALVRAGATVEVTDRGRIVARIVPAEDDRYEQLVAAGLIRQATGPFN 60
Query 57 PARVHGPAPRPT 68
PA + PA PT
Sbjct 61 PAHLPEPAANPT 72
>gi|296166225|ref|ZP_06848664.1| prevent-host-death family antitoxin [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295898409|gb|EFG77976.1| prevent-host-death family antitoxin [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=89
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/87 (34%), Positives = 47/87 (55%), Gaps = 2/87 (2%)
Query 4 VSIRTLNQETSKVLARV-KRGEEINLTERGKVIARIIPASAGPLDSLISTGSVQPARVHG 62
+ +R L Q S+ LA+V G+ I +TE G+ IAR++P + P +++ G + PA G
Sbjct 4 IGVRELRQHASRYLAKVTASGDFIEITEHGRPIARLVPITDDPWADMVAAGEITPA-AGG 62
Query 63 PAPRPTIPMRGGLDSGTLLERMRAEER 89
+ R P+ D+ L +RA ER
Sbjct 63 GSVRDMEPIASDFDASGELADLRAAER 89
>gi|269978025|ref|ZP_06184975.1| toxin-antitoxin system, antitoxin component, PHD family [Mobiluncus
mulieris 28-1]
gi|307700770|ref|ZP_07637795.1| toxin-antitoxin system, antitoxin component, PHD family [Mobiluncus
mulieris FB024-16]
gi|269933534|gb|EEZ90118.1| toxin-antitoxin system, antitoxin component, PHD family [Mobiluncus
mulieris 28-1]
gi|307613765|gb|EFN93009.1| toxin-antitoxin system, antitoxin component, PHD family [Mobiluncus
mulieris FB024-16]
Length=87
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/85 (33%), Positives = 44/85 (52%), Gaps = 0/85 (0%)
Query 6 IRTLNQETSKVLARVKRGEEINLTERGKVIARIIPASAGPLDSLISTGSVQPARVHGPAP 65
+R L Q S+VL RV GE + +T R + +A ++P PL L + G V+ A+ A
Sbjct 3 LRELGQNASEVLRRVAAGEVLTVTNRRRPVAWLVPWQESPLARLQNAGMVRAAKASWEAV 62
Query 66 RPTIPMRGGLDSGTLLERMRAEERY 90
+P G + + +L +R ERY
Sbjct 63 SKPLPATGAMPASAVLAELREAERY 87
>gi|294995819|ref|ZP_06801510.1| antitoxin [Mycobacterium tuberculosis 210]
gi|326905251|gb|EGE52184.1| antitoxin [Mycobacterium tuberculosis W-148]
Length=99
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/61 (43%), Positives = 40/61 (66%), Gaps = 2/61 (3%)
Query 1 VNEVSIRTLNQETSKVLARVKRGEEINLTERGKVIARIIPASAG--PLDSLISTGSVQPA 58
V + IR L Q S+ LARV+ GEE+ +T +G+++AR+IP A ++LI +G + PA
Sbjct 8 VEAIGIRELRQHASRYLARVEAGEELGVTNKGRLVARLIPVQAAERSREALIESGVLIPA 67
Query 59 R 59
R
Sbjct 68 R 68
>gi|15610543|ref|NP_217924.1| hypothetical protein Rv3407 [Mycobacterium tuberculosis H37Rv]
gi|15843002|ref|NP_338039.1| hypothetical protein MT3515 [Mycobacterium tuberculosis CDC1551]
gi|31794588|ref|NP_857081.1| hypothetical protein Mb3441 [Mycobacterium bovis AF2122/97]
56 more sequence titles
Length=99
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/61 (43%), Positives = 40/61 (66%), Gaps = 2/61 (3%)
Query 1 VNEVSIRTLNQETSKVLARVKRGEEINLTERGKVIARIIPASAG--PLDSLISTGSVQPA 58
V + IR L Q S+ LARV+ GEE+ +T +G+++AR+IP A ++LI +G + PA
Sbjct 8 VEAIGIRELRQHASRYLARVEAGEELGVTNKGRLVARLIPVQAAERSREALIESGVLIPA 67
Query 59 R 59
R
Sbjct 68 R 68
>gi|284992147|ref|YP_003410701.1| prevent-host-death family protein [Geodermatophilus obscurus
DSM 43160]
gi|284065392|gb|ADB76330.1| prevent-host-death family protein [Geodermatophilus obscurus
DSM 43160]
Length=85
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/69 (43%), Positives = 43/69 (63%), Gaps = 2/69 (2%)
Query 1 VNEVSIRTLNQETSKVLARVKRGEEINLTERGKVIARIIPAS-AGPLDSLISTGSVQPAR 59
++ V IR L S+ LA+V+ G + +T+ G+ +ARI+P + PL+ LI+ G VQPAR
Sbjct 1 MDSVGIRELRDGLSRYLAQVRAGRTVTVTDHGRPVARIVPVDESSPLERLIAEGLVQPAR 60
Query 60 VHG-PAPRP 67
APRP
Sbjct 61 QRERSAPRP 69
>gi|336179975|ref|YP_004585350.1| prevent-host-death family protein [Frankia symbiont of Datisca
glomerata]
gi|334860955|gb|AEH11429.1| prevent-host-death family protein [Frankia symbiont of Datisca
glomerata]
Length=98
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 39/55 (71%), Gaps = 0/55 (0%)
Query 4 VSIRTLNQETSKVLARVKRGEEINLTERGKVIARIIPASAGPLDSLISTGSVQPA 58
V +R L+Q T++VLA V+ GE + +T+RG+ +ARI+PA+ + L++ G ++ A
Sbjct 12 VGMRELSQRTARVLALVRAGETVEVTDRGRTVARIVPAADDRYEQLVAAGLIRRA 66
>gi|308232454|ref|ZP_07416084.2| antitoxin [Mycobacterium tuberculosis SUMu001]
gi|308370256|ref|ZP_07420812.2| antitoxin [Mycobacterium tuberculosis SUMu002]
gi|308371338|ref|ZP_07424617.2| antitoxin [Mycobacterium tuberculosis SUMu003]
15 more sequence titles
Length=92
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/58 (44%), Positives = 39/58 (68%), Gaps = 2/58 (3%)
Query 4 VSIRTLNQETSKVLARVKRGEEINLTERGKVIARIIPASAG--PLDSLISTGSVQPAR 59
+ IR L Q S+ LARV+ GEE+ +T +G+++AR+IP A ++LI +G + PAR
Sbjct 4 IGIRELRQHASRYLARVEAGEELGVTNKGRLVARLIPVQAAERSREALIESGVLIPAR 61
>gi|256372389|ref|YP_003110213.1| prevent-host-death family protein [Acidimicrobium ferrooxidans
DSM 10331]
gi|256008973|gb|ACU54540.1| prevent-host-death family protein [Acidimicrobium ferrooxidans
DSM 10331]
Length=91
Score = 47.8 bits (112), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/59 (34%), Positives = 39/59 (67%), Gaps = 0/59 (0%)
Query 1 VNEVSIRTLNQETSKVLARVKRGEEINLTERGKVIARIIPASAGPLDSLISTGSVQPAR 59
++ V IR L Q S+V+AR GE + +T+RG+ +A+++P G + + +++G +PA+
Sbjct 1 MSTVGIRALKQNASQVVARAAAGEVVTITDRGRPVAQLVPVPEGRVAAFVASGRARPAK 59
>gi|240170729|ref|ZP_04749388.1| hypothetical protein MkanA1_15547 [Mycobacterium kansasii ATCC
12478]
Length=99
Score = 47.4 bits (111), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/68 (37%), Positives = 42/68 (62%), Gaps = 6/68 (8%)
Query 1 VNEVSIRTLNQETSKVLARVKRGEEINLTERGKVIARIIPASAG--PLDSLISTGSVQPA 58
V + +R L Q S+ LARV+ GEE+ +T G+++AR++P A ++LI +G++ PA
Sbjct 8 VEAIGVRELRQHASRYLARVEAGEELGITNNGRLVARLVPVQAAERSREALIESGTLIPA 67
Query 59 RVHGPAPR 66
P P+
Sbjct 68 ----PCPQ 71
>gi|284041683|ref|YP_003392023.1| prevent-host-death family protein [Conexibacter woesei DSM 14684]
gi|283945904|gb|ADB48648.1| prevent-host-death family protein [Conexibacter woesei DSM 14684]
Length=89
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/76 (39%), Positives = 45/76 (60%), Gaps = 6/76 (7%)
Query 1 VNEVSIRTLNQETSKVLARVKRGEEINLTERGKVIARIIPASAGP-LDSLISTGSVQPAR 59
+ E+ IR L ETS ++ +V+ GE + +T RG+ +AR++PA P + L+ TG V R
Sbjct 1 MREIGIRQLKNETSALIEQVEHGEVLTVTRRGRPVARVVPAGMSPGIAQLVETGRV---R 57
Query 60 VHG--PAPRPTIPMRG 73
G PA P + +RG
Sbjct 58 WSGRKPALPPAVELRG 73
>gi|297570944|ref|YP_003696718.1| prevent-host-death family protein [Arcanobacterium haemolyticum
DSM 20595]
gi|296931291|gb|ADH92099.1| prevent-host-death family protein [Arcanobacterium haemolyticum
DSM 20595]
Length=103
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/58 (47%), Positives = 40/58 (69%), Gaps = 3/58 (5%)
Query 4 VSIRTLNQETSKVLARVKRG-EEINLTERGKVIARIIP--ASAGPLDSLISTGSVQPA 58
VS+R LNQ++ +V+ARV+ +E+ +T+RGK IA I+P A PL LI+ G+ PA
Sbjct 12 VSLRELNQQSGRVMARVRDSQQEVIVTDRGKPIATIVPIQAEVSPLARLIAEGNALPA 69
>gi|336178691|ref|YP_004584066.1| prevent-host-death family protein [Frankia symbiont of Datisca
glomerata]
gi|334859671|gb|AEH10145.1| prevent-host-death family protein [Frankia symbiont of Datisca
glomerata]
Length=94
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/54 (41%), Positives = 36/54 (67%), Gaps = 2/54 (3%)
Query 3 EVSIRTLNQETSKVLARVKRGEEINLTERGKVIARIIPA--SAGPLDSLISTGS 54
+V +R LNQ TS+V+ RV+RGE + +T+RG +AR++P L+ L++ G
Sbjct 3 QVGVRELNQNTSQVIERVRRGETVEVTDRGHPVARLVPVERELSVLERLVAEGQ 56
>gi|284029010|ref|YP_003378941.1| prevent-host-death family protein [Kribbella flavida DSM 17836]
gi|283808303|gb|ADB30142.1| prevent-host-death family protein [Kribbella flavida DSM 17836]
Length=93
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/61 (40%), Positives = 36/61 (60%), Gaps = 2/61 (3%)
Query 4 VSIRTLNQETSKVLARVKRGEEINLTERGKVIARIIPASAGP--LDSLISTGSVQPARVH 61
+ +R LNQ SK +ARV+ GE I +T+RG+ + R++P P L +I +G V P
Sbjct 4 IGLRELNQNPSKAVARVRAGETIVVTDRGRPVLRLVPEQEQPATLQHMIDSGEVAPPAEF 63
Query 62 G 62
G
Sbjct 64 G 64
>gi|108802492|ref|YP_642688.1| prevent-host-death protein [Mycobacterium sp. MCS]
gi|119855320|ref|YP_935923.1| prevent-host-death family protein [Mycobacterium sp. KMS]
gi|108772911|gb|ABG11632.1| Prevent-host-death protein [Mycobacterium sp. MCS]
gi|119698037|gb|ABL95108.1| prevent-host-death family protein [Mycobacterium sp. KMS]
Length=86
Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/70 (38%), Positives = 39/70 (56%), Gaps = 5/70 (7%)
Query 6 IRTLNQETSKVLARVKRGEEINLTERGKVIARIIPASAGPLDSLISTGSVQPAR-----V 60
+R L Q S +L +V GE I +T G+ +A++IPA+ P +LI++ V PAR +
Sbjct 9 VRELRQNASVLLRQVAAGETIEITSNGQPVAQLIPATYDPWTALIASKEVTPARTGVTDI 68
Query 61 HGPAPRPTIP 70
PRP P
Sbjct 69 LDNPPRPYTP 78
>gi|284989379|ref|YP_003407933.1| prevent-host-death family protein [Geodermatophilus obscurus
DSM 43160]
gi|284062624|gb|ADB73562.1| prevent-host-death family protein [Geodermatophilus obscurus
DSM 43160]
Length=91
Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/89 (36%), Positives = 46/89 (52%), Gaps = 2/89 (2%)
Query 1 VNEVSIRTLNQETSKVLARVKRGEEINLTERGKVIARIIPAS--AGPLDSLISTGSVQPA 58
+ + +R L Q S+ LA VK GE + +TERG++IA + P S A + LI+ G + PA
Sbjct 1 MTRIGVRELRQNASRYLALVKAGETVEVTERGELIAVLSPPSPAATTRERLIAEGRLVPA 60
Query 59 RVHGPAPRPTIPMRGGLDSGTLLERMRAE 87
P P G L + L+ RAE
Sbjct 61 SAPFRIPDRVPPPAGALSASEALDEQRAE 89
>gi|312198894|ref|YP_004018955.1| prevent-host-death family protein [Frankia sp. EuI1c]
gi|311230230|gb|ADP83085.1| prevent-host-death family protein [Frankia sp. EuI1c]
Length=84
Score = 43.9 bits (102), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/67 (41%), Positives = 40/67 (60%), Gaps = 2/67 (2%)
Query 3 EVSIRTLNQETSKVLARVKRGEEINLTERGKVIARIIP-ASAGPLDSLISTGSVQPARVH 61
+V IR L S+ LA V+ G + +T+ G+ IAR++P A L+ LI+ G V+PAR
Sbjct 2 DVGIRDLRDNLSRHLAEVRAGRTLTITDHGRAIARLVPVAKPTRLEQLIAEGVVEPARSR 61
Query 62 G-PAPRP 67
+PRP
Sbjct 62 TRTSPRP 68
>gi|330465108|ref|YP_004402851.1| prevent-host-death family protein [Verrucosispora maris AB-18-032]
gi|328808079|gb|AEB42251.1| prevent-host-death family protein [Verrucosispora maris AB-18-032]
Length=153
Score = 43.5 bits (101), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/81 (40%), Positives = 40/81 (50%), Gaps = 2/81 (2%)
Query 11 QETSKVLARVKRGEEINLTERGKVIARIIPASA--GPLDSLISTGSVQPARVHGPAPRPT 68
Q TS+VLA V+ G I +T+RG IAR++P S L L+ G V GP P P
Sbjct 72 QTTSQVLAGVRNGGTIEITDRGHPIARLVPVSDDRSMLAELVEAGRVVAPTGGGPVPLPP 131
Query 69 IPMRGGLDSGTLLERMRAEER 89
+D L MR EER
Sbjct 132 KLGDENVDVAASLAAMRNEER 152
>gi|271962908|ref|YP_003337104.1| hypothetical protein Sros_1366 [Streptosporangium roseum DSM
43021]
gi|270506083|gb|ACZ84361.1| hypothetical protein Sros_1366 [Streptosporangium roseum DSM
43021]
Length=81
Score = 43.1 bits (100), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/39 (52%), Positives = 28/39 (72%), Gaps = 0/39 (0%)
Query 2 NEVSIRTLNQETSKVLARVKRGEEINLTERGKVIARIIP 40
+ V +R L TS+VLA+VK GE + +TERG+ IA +IP
Sbjct 9 HTVGVRDLTHGTSQVLAQVKAGETLTITERGEPIAMVIP 47
>gi|336176938|ref|YP_004582313.1| prevent-host-death family protein [Frankia symbiont of Datisca
glomerata]
gi|334857918|gb|AEH08392.1| prevent-host-death family protein [Frankia symbiont of Datisca
glomerata]
Length=96
Score = 42.0 bits (97), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 31/87 (36%), Positives = 42/87 (49%), Gaps = 2/87 (2%)
Query 4 VSIRTLNQETSKVLARVKRGEEINLTERGKVIARIIPAS--AGPLDSLISTGSVQPARVH 61
+ +R L S++L RVK GE I +TERG++IA + P S LI G +QP
Sbjct 8 IGVRELQHNASRILDRVKTGETIEITERGRLIAVLTPPSDLHQARARLIDEGVLQPGEGG 67
Query 62 GPAPRPTIPMRGGLDSGTLLERMRAEE 88
P P G +L MRAE+
Sbjct 68 LAEWEPGPPRTDGPALSEVLLDMRAED 94
>gi|120402716|ref|YP_952545.1| prevent-host-death family protein [Mycobacterium vanbaalenii
PYR-1]
gi|119955534|gb|ABM12539.1| prevent-host-death family protein [Mycobacterium vanbaalenii
PYR-1]
Length=95
Score = 40.8 bits (94), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 20/60 (34%), Positives = 36/60 (60%), Gaps = 2/60 (3%)
Query 1 VNEVSIRTLNQETSKVLARVKRGEEINLTERGKVIARIIPASAGPL--DSLISTGSVQPA 58
V + +R L Q S +A+ + GE I +T RG+++AR+ P + + ++LI +G + PA
Sbjct 7 VERIGVRELRQHASTWVAKAQAGETIEITSRGRLVARLTPVADALVTREALIDSGQLVPA 66
>gi|343918886|gb|EGV29645.1| prevent-host-death family protein [Thiorhodococcus drewsii AZ1]
Length=83
Score = 40.4 bits (93), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 20/37 (55%), Positives = 27/37 (73%), Gaps = 0/37 (0%)
Query 4 VSIRTLNQETSKVLARVKRGEEINLTERGKVIARIIP 40
VSIR NQ S+ L RV++G E+ +T RGK IAR++P
Sbjct 5 VSIRDANQHLSRYLERVEQGAEVIITRRGKPIARLMP 41
>gi|344201299|ref|YP_004785625.1| prevent-host-death family protein [Acidithiobacillus ferrivorans
SS3]
gi|343776743|gb|AEM49299.1| prevent-host-death family protein [Acidithiobacillus ferrivorans
SS3]
Length=98
Score = 39.3 bits (90), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/48 (42%), Positives = 27/48 (57%), Gaps = 0/48 (0%)
Query 1 VNEVSIRTLNQETSKVLARVKRGEEINLTERGKVIARIIPASAGPLDS 48
+ VS+R NQ SK + G EI +T+RG+ +ARI P G L S
Sbjct 3 IQHVSLREANQHLSKYIEMASHGSEIIVTKRGRPVARIAPIEVGGLMS 50
>gi|158521793|ref|YP_001529663.1| prevent-host-death family protein [Desulfococcus oleovorans Hxd3]
gi|158510619|gb|ABW67586.1| prevent-host-death family protein [Desulfococcus oleovorans Hxd3]
Length=78
Score = 39.3 bits (90), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 29/93 (32%), Positives = 48/93 (52%), Gaps = 22/93 (23%)
Query 3 EVSIRTLNQETSKVLARVKRGEEINLTERGKVIARIIPASAG-----PLDSLISTGSVQP 57
EV+++ ++ S +L R ++GEEI++ RGK +AR++PA+ LDS
Sbjct 3 EVNVKEAREKISALLDRTQKGEEISILRRGKKVARLLPAADAEKRLPDLDSF-------- 54
Query 58 ARVHGPAPRPTIPMRGGLDSGTLLERMRAEERY 90
R +I +GG S +++ R EERY
Sbjct 55 --------RASITSKGGSLSRAVID-GRNEERY 78
>gi|344340184|ref|ZP_08771110.1| prevent-host-death family protein [Thiocapsa marina 5811]
gi|343799842|gb|EGV17790.1| prevent-host-death family protein [Thiocapsa marina 5811]
Length=82
Score = 39.3 bits (90), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 28/77 (37%), Positives = 39/77 (51%), Gaps = 8/77 (10%)
Query 14 SKVLARVKRGEEINLTERGKVIARIIPASAGPLDSLISTGSVQPARVHGPAPRPTIPMRG 73
S VLA+V+ GEE+ +T RG IARI+ A S + A V G PM
Sbjct 14 SAVLAQVEAGEEVVITRRGVAIARIVAEPAAR-SSQFDMAEL-FAFVDGQ------PMHV 65
Query 74 GLDSGTLLERMRAEERY 90
G+D+G + MR + R+
Sbjct 66 GMDAGQFVGEMRTDARF 82
>gi|254420356|ref|ZP_05034080.1| prevent-host-death family protein, putative [Brevundimonas sp.
BAL3]
gi|196186533|gb|EDX81509.1| prevent-host-death family protein, putative [Brevundimonas sp.
BAL3]
Length=83
Score = 39.3 bits (90), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 38/75 (51%), Gaps = 10/75 (13%)
Query 15 KVLARVKRGEEINLTERGKVIARIIPASAG-PLDSLISTGSVQPARVHGPAPRPTIPMRG 73
K+L R+ GE + +T RG +AR+ PA A P I ++ R+ AP
Sbjct 17 KLLDRMLAGEAVTITRRGVPVARLEPAKAAVPTSGPIDMAWLEKVRIKSEAP-------- 68
Query 74 GLDSGTLLERMRAEE 88
+DS TL+ RMR EE
Sbjct 69 -MDSVTLVRRMRDEE 82
>gi|294629003|ref|ZP_06707563.1| conserved hypothetical protein [Streptomyces sp. e14]
gi|292832336|gb|EFF90685.1| conserved hypothetical protein [Streptomyces sp. e14]
Length=80
Score = 38.9 bits (89), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 16/38 (43%), Positives = 25/38 (66%), Gaps = 0/38 (0%)
Query 3 EVSIRTLNQETSKVLARVKRGEEINLTERGKVIARIIP 40
E + R NQ +S+VLA RGE + +T+ G +AR++P
Sbjct 2 ETTAREFNQRSSQVLAAAARGETVTVTKNGVAVARVVP 39
>gi|148264443|ref|YP_001231149.1| prevent-host-death family protein [Geobacter uraniireducens Rf4]
gi|146397943|gb|ABQ26576.1| prevent-host-death family protein [Geobacter uraniireducens Rf4]
Length=83
Score = 38.1 bits (87), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 17/40 (43%), Positives = 26/40 (65%), Gaps = 0/40 (0%)
Query 3 EVSIRTLNQETSKVLARVKRGEEINLTERGKVIARIIPAS 42
EV+I + L +VK+GE+I LT RGKV+A++ P +
Sbjct 7 EVNITEFRNHLPEYLGQVKKGEDIFLTSRGKVVAKVTPVT 46
>gi|284044420|ref|YP_003394760.1| prevent-host-death family protein [Conexibacter woesei DSM 14684]
gi|283948641|gb|ADB51385.1| prevent-host-death family protein [Conexibacter woesei DSM 14684]
Length=91
Score = 37.7 bits (86), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 29/93 (32%), Positives = 47/93 (51%), Gaps = 6/93 (6%)
Query 1 VNEVSIRTLNQETSKVLARVKRGEEINLTERGKVIARIIPA-SAGPLDSLISTGSVQPAR 59
+ + IR L Q+ S+ L V+RGE +T+RG+ +A + P A ++ L ++G ++ R
Sbjct 1 MRSIGIRELRQQASRYLREVERGETFEVTDRGRPVALLAPVPQASTVERLAASGRLR--R 58
Query 60 VHGPA---PRPTIPMRGGLDSGTLLERMRAEER 89
G P P G LER+R +ER
Sbjct 59 ASGDVLALGEPLAPAAGISTPSETLERLRDDER 91
>gi|88812277|ref|ZP_01127528.1| hypothetical protein NB231_02718 [Nitrococcus mobilis Nb-231]
gi|88790528|gb|EAR21644.1| hypothetical protein NB231_02718 [Nitrococcus mobilis Nb-231]
Length=93
Score = 37.4 bits (85), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 17/38 (45%), Positives = 25/38 (66%), Gaps = 0/38 (0%)
Query 3 EVSIRTLNQETSKVLARVKRGEEINLTERGKVIARIIP 40
EVS+R L S+ L R + GEEI + RG+ +AR++P
Sbjct 2 EVSVRELKNRLSEYLRRTQAGEEITIASRGRPVARLLP 39
>gi|301064252|ref|ZP_07204695.1| toxin-antitoxin system, antitoxin component, PHD family [delta
proteobacterium NaphS2]
gi|300441697|gb|EFK06019.1| toxin-antitoxin system, antitoxin component, PHD family [delta
proteobacterium NaphS2]
Length=89
Score = 37.0 bits (84), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 30/92 (33%), Positives = 46/92 (50%), Gaps = 10/92 (10%)
Query 1 VNEVSIRTLNQETSKVLARVKRGEEINLTERGKVIARIIPASAGPLDS----LISTGSVQ 56
+ + IR L + S+ + +VK G+ I +T+R K IA IIP P+ LI +G VQ
Sbjct 1 MESIGIRHLKENLSRYMKQVKSGQSIVITDRKKEIAVIIPFERTPVKEKVWPLIQSGMVQ 60
Query 57 PARVHGPAPRPT---IPMRGGLDSGTLLERMR 85
+ G P+ IP +G S ++E R
Sbjct 61 WS---GGKPKGMSHRIPSKGKSVSQAVIEDRR 89
>gi|334118132|ref|ZP_08492222.1| prevent-host-death family protein [Microcoleus vaginatus FGP-2]
gi|333460117|gb|EGK88727.1| prevent-host-death family protein [Microcoleus vaginatus FGP-2]
Length=78
Score = 37.0 bits (84), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/88 (31%), Positives = 46/88 (53%), Gaps = 14/88 (15%)
Query 4 VSIRTLNQETSKVLARVKRGEEINLTERGKVIARIIPASAGPLDSLISTGSVQPARVHGP 63
+S+ Q +L +V +GEE+ + G+V+AR++P PL + R+ P
Sbjct 4 ISLEEAKQSLQAILEKVAKGEEVTIVHEGQVVARVVP----PLS--------KEQRLARP 51
Query 64 -APRPTIPMRGGLDSGTLLERMRAEERY 90
A R +I ++G S T++ R+R E RY
Sbjct 52 KAFRNSINVKGEPMSATVI-RLREEARY 78
>gi|334131960|ref|ZP_08505722.1| Prevent-host-death family protein [Methyloversatilis universalis
FAM5]
gi|333443433|gb|EGK71398.1| Prevent-host-death family protein [Methyloversatilis universalis
FAM5]
Length=69
Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/32 (54%), Positives = 22/32 (69%), Gaps = 0/32 (0%)
Query 9 LNQETSKVLARVKRGEEINLTERGKVIARIIP 40
+ + +LA V RGEEI +T GKVIAR+IP
Sbjct 1 MKSRLAALLADVARGEEIAITRHGKVIARLIP 32
>gi|344340342|ref|ZP_08771268.1| prevent-host-death family protein [Thiocapsa marina 5811]
gi|343800000|gb|EGV17948.1| prevent-host-death family protein [Thiocapsa marina 5811]
Length=88
Score = 36.6 bits (83), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/90 (33%), Positives = 48/90 (54%), Gaps = 7/90 (7%)
Query 3 EVSIRTLNQETSKVLARVKRGEEINLTERGKVIARIIPASAGPLDSL---ISTGSVQPAR 59
+V+IR L S++L R + GE I +T K+IARI+ +G + L I +G++ +
Sbjct 2 QVAIRDLKANLSRILTRAQAGESIEVTSHNKLIARIVGIPSGTAEGLRESIGSGTLSWS- 60
Query 60 VHGPAPRPTIPMRGGLDSGTLLERMRAEER 89
G P+ P+ + GT + RM E+R
Sbjct 61 --GGKPQLAPPVELSAE-GTPVSRMVLEDR 87
>gi|269957801|ref|YP_003327590.1| prevent-host-death family protein [Xylanimonas cellulosilytica
DSM 15894]
gi|269306482|gb|ACZ32032.1| prevent-host-death family protein [Xylanimonas cellulosilytica
DSM 15894]
Length=91
Score = 36.6 bits (83), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/68 (33%), Positives = 36/68 (53%), Gaps = 1/68 (1%)
Query 3 EVSIRTLNQETSKVLARVKRGEEINLTERGKVIARIIPASAGPL-DSLISTGSVQPARVH 61
EV++ L E + R ++GEE+ +T+RG +AR+ A L L+ G + PA+V
Sbjct 2 EVAVSALRAELKSWIERARQGEEVIITDRGLPVARLSGIGAADLVQGLVRDGLLTPAQVE 61
Query 62 GPAPRPTI 69
P P +
Sbjct 62 RPVHEPPV 69
>gi|88810220|ref|ZP_01125477.1| hypothetical protein NB231_14108 [Nitrococcus mobilis Nb-231]
gi|88791850|gb|EAR22960.1| hypothetical protein NB231_14108 [Nitrococcus mobilis Nb-231]
Length=93
Score = 36.2 bits (82), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/62 (33%), Positives = 34/62 (55%), Gaps = 3/62 (4%)
Query 1 VNEVSIRTLNQETSKVLARVKRGEEINLTERGKVIARIIPASAGPLDSLISTGSVQPARV 60
+ ++ R L S VL R++ GEEI++T GKV+ R+ P P + + + ++ R
Sbjct 1 MKQIGTRELKGHLSAVLRRMRDGEEISVTSHGKVVVRLSPP---PAEGGVESDALARLRR 57
Query 61 HG 62
HG
Sbjct 58 HG 59
>gi|255020444|ref|ZP_05292510.1| hypothetical protein ACA_1854 [Acidithiobacillus caldus ATCC
51756]
gi|254970157|gb|EET27653.1| hypothetical protein ACA_1854 [Acidithiobacillus caldus ATCC
51756]
Length=83
Score = 36.2 bits (82), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/44 (41%), Positives = 25/44 (57%), Gaps = 0/44 (0%)
Query 1 VNEVSIRTLNQETSKVLARVKRGEEINLTERGKVIARIIPASAG 44
+ VS+R NQ SK + G EI +T+RG+ +ARI P G
Sbjct 3 IQHVSLREANQRFSKYIEMASHGTEIIVTKRGRPVARIAPIEVG 46
>gi|255579005|ref|XP_002530354.1| conserved hypothetical protein [Ricinus communis]
gi|223530101|gb|EEF32015.1| conserved hypothetical protein [Ricinus communis]
Length=534
Score = 36.2 bits (82), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/38 (43%), Positives = 23/38 (61%), Gaps = 1/38 (2%)
Query 29 TERGKVIARIIPASAGPLDSLISTGSVQPARVH-GPAP 65
T +GK + +PAS P+ L++ G QP + H GPAP
Sbjct 434 THKGKTVQTQMPASVAPVPLLMTAGYTQPGKAHPGPAP 471
>gi|147678885|ref|YP_001213100.1| hypothetical protein PTH_2550 [Pelotomaculum thermopropionicum
SI]
gi|146274982|dbj|BAF60731.1| hypothetical protein [Pelotomaculum thermopropionicum SI]
Length=98
Score = 36.2 bits (82), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 28/92 (31%), Positives = 44/92 (48%), Gaps = 6/92 (6%)
Query 4 VSIRTLNQETSKVLARVKRGEEINLTERGKVIARIIPAS------AGPLDSLISTGSVQP 57
+ IR SK+L V++G EI +T+R + + RI+P + A ++SL+ G +Q
Sbjct 6 IGIRDAKINLSKLLKEVQKGAEIIITDRNRPVGRIVPVTPEALSLAERIESLVREGLIQA 65
Query 58 ARVHGPAPRPTIPMRGGLDSGTLLERMRAEER 89
A+ P G + LE RA ER
Sbjct 66 AKKKKINKLPPPLPLPGRSAREFLEEDRAGER 97
>gi|334337552|ref|YP_004542704.1| prevent-host-death family protein [Isoptericola variabilis 225]
gi|334107920|gb|AEG44810.1| prevent-host-death family protein [Isoptericola variabilis 225]
Length=87
Score = 36.2 bits (82), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 31/90 (35%), Positives = 46/90 (52%), Gaps = 3/90 (3%)
Query 1 VNEVSIRTLNQETSKVLARVKRGEEINLTERGKVIARIIPASAGPLDSLISTGSVQPARV 60
++ V IR L Q S V++ GE I +T+RG+ +A++ + +D L +TG V+ R
Sbjct 1 MSTVGIRELKQNASAVVSSAAAGEVITITDRGRPVAQLSALADTVIDRLTATGQVR--RA 58
Query 61 HGPAPRPTIPMRGGLDSGTLLERMRAEERY 90
H P G S +L E MR ERY
Sbjct 59 HRRMRDLPAPTAAGDVSASLAE-MRDAERY 87
>gi|333978033|ref|YP_004515978.1| prevent-host-death family protein [Desulfotomaculum kuznetsovii
DSM 6115]
gi|333821514|gb|AEG14177.1| prevent-host-death family protein [Desulfotomaculum kuznetsovii
DSM 6115]
Length=78
Score = 35.8 bits (81), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/43 (40%), Positives = 27/43 (63%), Gaps = 0/43 (0%)
Query 3 EVSIRTLNQETSKVLARVKRGEEINLTERGKVIARIIPASAGP 45
+V+I SK+LARVK GEE+ + + G +AR++P + P
Sbjct 4 QVNIHEAKTHFSKLLARVKEGEEVVIAKAGTPVARLVPVTERP 46
>gi|124515562|gb|EAY57072.1| Prevent-host-death protein [Leptospirillum rubarum]
gi|206601807|gb|EDZ38290.1| Prevent-host-death protein [Leptospirillum sp. Group II '5-way
CG']
Length=81
Score = 35.8 bits (81), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/37 (44%), Positives = 23/37 (63%), Gaps = 0/37 (0%)
Query 4 VSIRTLNQETSKVLARVKRGEEINLTERGKVIARIIP 40
+++ L Q L RV GEEI +T GK+IAR++P
Sbjct 4 INVTELRQHLPAYLKRVASGEEIGITSHGKIIARLLP 40
Lambda K H
0.314 0.133 0.364
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 129182109240
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40