BLASTP 2.2.25+


Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           15,229,318 sequences; 5,219,829,388 total letters



Query= Rv1962c

Length=135
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|15609099|ref|NP_216478.1|  hypothetical protein Rv1962c [Mycob...   257    4e-67
gi|296169436|ref|ZP_06851057.1|  PIN family toxin-antitoxin syste...   207    4e-52
gi|336178644|ref|YP_004584019.1|  PilT protein domain-containing ...   137    6e-31
gi|300790923|ref|YP_003771214.1|  hypothetical protein AMED_9123 ...   133    7e-30
gi|302864894|ref|YP_003833531.1|  hypothetical protein Micau_0388...   132    2e-29
gi|315501180|ref|YP_004080067.1|  hypothetical protein ML5_0364 [...   131    3e-29
gi|284029018|ref|YP_003378949.1|  hypothetical protein Kfla_1046 ...   130    7e-29
gi|288917440|ref|ZP_06411806.1|  hypothetical protein FrEUN1fDRAF...   112    1e-23
gi|336178692|ref|YP_004584067.1|  hypothetical protein FsymDg_281...   109    2e-22
gi|336178809|ref|YP_004584184.1|  PilT protein domain-containing ...  87.4    7e-16
gi|284989378|ref|YP_003407932.1|  PilT protein domain-containing ...  85.5    2e-15
gi|86741564|ref|YP_481964.1|  PilT protein-like protein [Frankia ...  84.0    7e-15
gi|296169352|ref|ZP_06850977.1|  PIN family toxin-antitoxin syste...  82.0    3e-14
gi|15610520|ref|NP_217901.1|  hypothetical protein Rv3384c [Mycob...  81.6    4e-14
gi|15842977|ref|NP_338014.1|  hypothetical protein MT3492 [Mycoba...  81.6    4e-14
gi|340628364|ref|YP_004746816.1|  hypothetical protein MCAN_34091...  77.8    5e-13
gi|307700859|ref|ZP_07637884.1|  toxin-antitoxin system, toxin co...  77.8    5e-13
gi|336179976|ref|YP_004585351.1|  PilT protein domain-containing ...  77.8    5e-13
gi|269978026|ref|ZP_06184976.1|  toxin-antitoxin system, toxin co...  77.4    7e-13
gi|336176937|ref|YP_004582312.1|  hypothetical protein FsymDg_088...  76.3    1e-12
gi|120402717|ref|YP_952546.1|  PilT domain-containing protein [My...  76.3    1e-12
gi|334337553|ref|YP_004542705.1|  PilT protein domain protein [Is...  76.3    2e-12
gi|296166224|ref|ZP_06848663.1|  PIN family toxin-antitoxin syste...  75.1    3e-12
gi|182435669|ref|YP_001823388.1|  hypothetical protein SGR_1876 [...  74.7    4e-12
gi|326382371|ref|ZP_08204063.1|  toxin [Gordonia neofelifaecis NR...  73.6    1e-11
gi|229821860|ref|YP_002883386.1|  twitching mobility protein PilT...  70.1    9e-11
gi|111220042|ref|YP_710836.1|  hypothetical protein FRAAL0552 [Fr...  68.9    3e-10
gi|108802491|ref|YP_642687.1|  hypothetical protein Mmcs_5531 [My...  68.6    3e-10
gi|240170730|ref|ZP_04749389.1|  hypothetical protein MkanA1_1555...  65.1    4e-09
gi|284044421|ref|YP_003394761.1|  hypothetical protein Cwoe_2967 ...  64.3    5e-09
gi|284029011|ref|YP_003378942.1|  hypothetical protein Kfla_1038 ...  59.3    2e-07
gi|31794589|ref|NP_857082.1|  hypothetical protein Mb3442 [Mycoba...  57.4    6e-07
gi|256372388|ref|YP_003110212.1|  PilT protein domain-containing ...  56.6    1e-06
gi|15610544|ref|NP_217925.1|  hypothetical protein Rv3408 [Mycoba...  55.5    3e-06
gi|325067177|ref|ZP_08125850.1|  PilT protein domain-containing p...  53.5    9e-06
gi|15843003|ref|NP_338040.1|  hypothetical protein MT3516 [Mycoba...  52.4    2e-05
gi|314971342|gb|EFT15440.1|  toxin-antitoxin system, toxin compon...  50.8    7e-05
gi|336115824|ref|YP_004570590.1|  hypothetical protein MLP_01730 ...  50.4    9e-05
gi|78224268|ref|YP_386015.1|  hypothetical protein Gmet_3076 [Geo...  49.3    2e-04
gi|326771646|ref|ZP_08230931.1|  toxin-antitoxin system, toxin co...  48.9    2e-04
gi|340358514|ref|ZP_08681031.1|  PilT domain protein [Actinomyces...  47.8    5e-04
gi|307701081|ref|ZP_07638106.1|  toxin-antitoxin system, toxin co...  47.4    8e-04
gi|306818894|ref|ZP_07452615.1|  conserved hypothetical protein [...  47.0    8e-04
gi|269977174|ref|ZP_06184147.1|  toxin-antitoxin system, toxin co...  45.4    0.003
gi|227875583|ref|ZP_03993723.1|  hypothetical protein HMPREF0577_...  45.4    0.003
gi|284045881|ref|YP_003396221.1|  hypothetical protein Cwoe_4432 ...  44.3    0.007
gi|328953359|ref|YP_004370693.1|  hypothetical protein Desac_1665...  42.4    0.026
gi|308274638|emb|CBX31237.1|  hypothetical protein N47_E47490 [un...  42.0    0.028
gi|336177878|ref|YP_004583253.1|  hypothetical protein FsymDg_189...  41.6    0.041
gi|343524031|ref|ZP_08760991.1|  putative toxin-antitoxin system,...  40.8    0.073


>gi|15609099|ref|NP_216478.1| hypothetical protein Rv1962c [Mycobacterium tuberculosis H37Rv]
 gi|15841433|ref|NP_336470.1| hypothetical protein MT2012 [Mycobacterium tuberculosis CDC1551]
 gi|31793154|ref|NP_855647.1| hypothetical protein Mb1997c [Mycobacterium bovis AF2122/97]
 81 more sequence titles
 Length=135

 Score =  257 bits (657),  Expect = 4e-67, Method: Compositional matrix adjust.
 Identities = 134/135 (99%), Positives = 135/135 (100%), Gaps = 0/135 (0%)

Query  1    VIYLETSALVKLIRIEVESDALADWLDDRTELRWITSALTEVELSRAIRAVSPEGLPAVP  60
            +IYLETSALVKLIRIEVESDALADWLDDRTELRWITSALTEVELSRAIRAVSPEGLPAVP
Sbjct  1    MIYLETSALVKLIRIEVESDALADWLDDRTELRWITSALTEVELSRAIRAVSPEGLPAVP  60

Query  61   SVLARLDRFEIDAVIRSTAAAYPNPALRSLDAIHLATAQTAGSVAPLTALVTYDNRLKEA  120
            SVLARLDRFEIDAVIRSTAAAYPNPALRSLDAIHLATAQTAGSVAPLTALVTYDNRLKEA
Sbjct  61   SVLARLDRFEIDAVIRSTAAAYPNPALRSLDAIHLATAQTAGSVAPLTALVTYDNRLKEA  120

Query  121  AEALSLAVVAPGQAR  135
            AEALSLAVVAPGQAR
Sbjct  121  AEALSLAVVAPGQAR  135


>gi|296169436|ref|ZP_06851057.1| PIN family toxin-antitoxin system [Mycobacterium parascrofulaceum 
ATCC BAA-614]
 gi|295895905|gb|EFG75599.1| PIN family toxin-antitoxin system [Mycobacterium parascrofulaceum 
ATCC BAA-614]
Length=135

 Score =  207 bits (527),  Expect = 4e-52, Method: Compositional matrix adjust.
 Identities = 106/133 (80%), Positives = 118/133 (89%), Gaps = 0/133 (0%)

Query  1    VIYLETSALVKLIRIEVESDALADWLDDRTELRWITSALTEVELSRAIRAVSPEGLPAVP  60
            +IYL+TSALVKLIRIEVESDALADWLD+RTE RWITSAL EVEL RAIRAV+P GL AVP
Sbjct  1    MIYLDTSALVKLIRIEVESDALADWLDERTETRWITSALAEVELPRAIRAVAPNGLSAVP  60

Query  61   SVLARLDRFEIDAVIRSTAAAYPNPALRSLDAIHLATAQTAGSVAPLTALVTYDNRLKEA  120
            SVLARLDRFEID VIR+TAAAYP+PALRSLDAIHLATAQ A S APLTA+V YD+RL +A
Sbjct  61   SVLARLDRFEIDQVIRATAAAYPDPALRSLDAIHLATAQIAASTAPLTAMVAYDSRLSDA  120

Query  121  AEALSLAVVAPGQ  133
            A AL + +V PG+
Sbjct  121  ARALGITIVTPGR  133


>gi|336178644|ref|YP_004584019.1| PilT protein domain-containing protein [Frankia symbiont of Datisca 
glomerata]
 gi|334859624|gb|AEH10098.1| PilT protein domain protein [Frankia symbiont of Datisca glomerata]
Length=138

 Score =  137 bits (345),  Expect = 6e-31, Method: Compositional matrix adjust.
 Identities = 79/135 (59%), Positives = 93/135 (69%), Gaps = 1/135 (0%)

Query  1    VIYLETSALVKLIRIEVESDALADWLDDRTELRWITSALTEVELSRAIRAVSPEGLPAVP  60
            +IYL+TSA+VKLIR E+ESD L DWL+ +   R ITS L EVEL RA+R   P  L AV 
Sbjct  1    MIYLDTSAIVKLIRPELESDKLVDWLNAQQNERVITSKLAEVELPRALRREEPARLAAVA  60

Query  61   SVLARLDRFEIDAVIRSTAAAYPNPALRSLDAIHLATA-QTAGSVAPLTALVTYDNRLKE  119
             VLA LDR +ID  +R+TA AYP P LRSLDAIHLATA Q   S   ++A VTYD RL  
Sbjct  61   GVLAHLDRLDIDDAVRATAGAYPFPHLRSLDAIHLATADQLVASGKTVSAFVTYDRRLAV  120

Query  120  AAEALSLAVVAPGQA  134
             A  L LAV APG++
Sbjct  121  TAGELGLAVAAPGRS  135


>gi|300790923|ref|YP_003771214.1| hypothetical protein AMED_9123 [Amycolatopsis mediterranei U32]
 gi|299800437|gb|ADJ50812.1| conserved hypothetical protein [Amycolatopsis mediterranei U32]
 gi|340532619|gb|AEK47824.1| hypothetical protein RAM_46795 [Amycolatopsis mediterranei S699]
Length=138

 Score =  133 bits (335),  Expect = 7e-30, Method: Compositional matrix adjust.
 Identities = 77/134 (58%), Positives = 93/134 (70%), Gaps = 1/134 (0%)

Query  1    VIYLETSALVKLIRIEVESDALADWLDDRTELRWITSALTEVELSRAIRAVSPEGLPAVP  60
            +IYL+T+ALVKLIR E ES AL DWLD+R     +TS L EVE+SRA+    P  L  VP
Sbjct  1    MIYLDTAALVKLIRHEAESAALVDWLDERQGTVLVTSTLAEVEVSRALLRSDPGLLTDVP  60

Query  61   SVLARLDRFEIDAVIRSTAAAYPNPALRSLDAIHLATAQTAGSVAPLTALVTYDNRLKEA  120
            +V+AR+ ++EID V+R TAAAYP+P LRSLDAIHLATA        LT+ VTYD RL   
Sbjct  61   AVMARVAKYEIDDVVRRTAAAYPSPDLRSLDAIHLATAHAVFG-RQLTSFVTYDKRLLAV  119

Query  121  AEALSLAVVAPGQA  134
            AEAL L   +PG A
Sbjct  120  AEALGLPTDSPGAA  133


>gi|302864894|ref|YP_003833531.1| hypothetical protein Micau_0388 [Micromonospora aurantiaca ATCC 
27029]
 gi|302567753|gb|ADL43955.1| hypothetical protein Micau_0388 [Micromonospora aurantiaca ATCC 
27029]
Length=136

 Score =  132 bits (331),  Expect = 2e-29, Method: Compositional matrix adjust.
 Identities = 69/135 (52%), Positives = 94/135 (70%), Gaps = 2/135 (1%)

Query  1    VIYLETSALVKLIRIEVESDALADWLDDRTELRWITSALTEVELSRAIRAVSPEGLPAVP  60
            +IYL+++A++K++R E E+  L  WL++R     ++SAL EVE+ RA+R  +P+ L  VP
Sbjct  1    MIYLDSAAVIKMLRREAETADLLGWLNERAGTALVSSALAEVEVPRALRRAAPQALVGVP  60

Query  61   SVLARLDRFEIDAVIRSTAAAYPNPALRSLDAIHLATAQTAG--SVAPLTALVTYDNRLK  118
            SVL RL R EIDA +R+TA AYP P LRSLDA+HLATA+     + A   A VTYD RL 
Sbjct  61   SVLGRLYRVEIDATVRATAGAYPEPMLRSLDAVHLATAEILARQAAAEFVAFVTYDKRLL  120

Query  119  EAAEALSLAVVAPGQ  133
            EAA+A+ L V +PG 
Sbjct  121  EAAKAIGLPVASPGM  135


>gi|315501180|ref|YP_004080067.1| hypothetical protein ML5_0364 [Micromonospora sp. L5]
 gi|315407799|gb|ADU05916.1| hypothetical protein ML5_0364 [Micromonospora sp. L5]
Length=136

 Score =  131 bits (330),  Expect = 3e-29, Method: Compositional matrix adjust.
 Identities = 69/135 (52%), Positives = 94/135 (70%), Gaps = 2/135 (1%)

Query  1    VIYLETSALVKLIRIEVESDALADWLDDRTELRWITSALTEVELSRAIRAVSPEGLPAVP  60
            +IYL+++A++K++R E E+  L  WL++R     ++SAL EVE+ RA+R  +P+ L  VP
Sbjct  1    MIYLDSAAVIKMLRREAETADLLGWLNERAGTALVSSALVEVEVPRALRRAAPQALVGVP  60

Query  61   SVLARLDRFEIDAVIRSTAAAYPNPALRSLDAIHLATAQTAG--SVAPLTALVTYDNRLK  118
            SVL RL R EIDA +R+TA AYP P LRSLDA+HLATA+     + A   A VTYD RL 
Sbjct  61   SVLGRLYRVEIDATVRATAGAYPEPMLRSLDAVHLATAEILARQAAAEFVAFVTYDERLL  120

Query  119  EAAEALSLAVVAPGQ  133
            EAA+A+ L V +PG 
Sbjct  121  EAAKAIGLPVASPGM  135


>gi|284029018|ref|YP_003378949.1| hypothetical protein Kfla_1046 [Kribbella flavida DSM 17836]
 gi|283808311|gb|ADB30150.1| conserved hypothetical protein [Kribbella flavida DSM 17836]
Length=131

 Score =  130 bits (327),  Expect = 7e-29, Method: Compositional matrix adjust.
 Identities = 75/131 (58%), Positives = 92/131 (71%), Gaps = 1/131 (0%)

Query  1    VIYLETSALVKLIRIEVESDALADWLDDRTELRWITSALTEVELSRAIRAVSPEGLPAVP  60
            +IYL T+ALVKL+R EV SDAL DWL+DR +L  ++SAL E+EL RA+R   P  L AVP
Sbjct  1    MIYLATAALVKLVRREVPSDALTDWLNDRMDLPLVSSALAEIELPRALRRTEPALLAAVP  60

Query  61   SVLARLDRFEIDAVIRSTAAAYPNPALRSLDAIHLATAQTAGSVAPLTALVTYDNRLKEA  120
            +VL+RL  +EID  +R+TAAAY +P +R LDAIHLATA  A     LTA VTYD RL  +
Sbjct  61   AVLSRLAVYEIDEQVRATAAAYADPLIRPLDAIHLATAH-AVLADDLTAFVTYDRRLLAS  119

Query  121  AEALSLAVVAP  131
            AE L L    P
Sbjct  120  AETLGLPTACP  130


>gi|288917440|ref|ZP_06411806.1| hypothetical protein FrEUN1fDRAFT_1501 [Frankia sp. EUN1f]
 gi|288351143|gb|EFC85354.1| hypothetical protein FrEUN1fDRAFT_1501 [Frankia sp. EUN1f]
Length=141

 Score =  112 bits (281),  Expect = 1e-23, Method: Compositional matrix adjust.
 Identities = 67/123 (55%), Positives = 84/123 (69%), Gaps = 2/123 (1%)

Query  1    VIYLETSALVKLIRIEVESDALADWLDDRTELRWITSALTEVELSRAIRAVSPEGLPAVP  60
            +IYL+++A+VKL+  E ES AL DWL+ R +L   TSAL EVE++RAIR  +PE    VP
Sbjct  1    MIYLDSAAVVKLVVAEPESAALVDWLNARDDLPRFTSALAEVEVARAIRRAAPEASGRVP  60

Query  61   SVLARLDRFEIDAVIRSTAAAYPNPALRSLDAIHLATA--QTAGSVAPLTALVTYDNRLK  118
             VL R+ R EID  +R+ AAA+ +P LRSLDAIHLATA      +   L A VTYD RL 
Sbjct  61   RVLDRMYRLEIDGRVRNVAAAFDDPLLRSLDAIHLATALRLVDANDTQLEAFVTYDKRLL  120

Query  119  EAA  121
            EAA
Sbjct  121  EAA  123


>gi|336178692|ref|YP_004584067.1| hypothetical protein FsymDg_2810 [Frankia symbiont of Datisca 
glomerata]
 gi|334859672|gb|AEH10146.1| hypothetical protein FsymDg_2810 [Frankia symbiont of Datisca 
glomerata]
Length=135

 Score =  109 bits (272),  Expect = 2e-22, Method: Compositional matrix adjust.
 Identities = 65/134 (49%), Positives = 85/134 (64%), Gaps = 2/134 (1%)

Query  1    VIYLETSALVKLIRIEVESDALADWLDDRTELRWITSALTEVELSRAIRAVSPEGLPAVP  60
            +IYL+++A++KL+R E  +  L DWLD    L  ++S L EVE SRA+R  +P+ L  +P
Sbjct  1    MIYLDSAAVIKLVRAEPFTVDLLDWLDAHRALPLVSSVLVEVEASRALRRCAPQALGRLP  60

Query  61   SVLARLDRFEIDAVIRSTAAAYPNPALRSLDAIHLATAQ--TAGSVAPLTALVTYDNRLK  118
              LARL R EI+A +R+ AAAY +P LRSLDA+HLATA   T    A L A VTYD RL 
Sbjct  61   VTLARLYRLEINATVRAVAAAYDDPQLRSLDAVHLATATVLTDQPGARLEAFVTYDKRLL  120

Query  119  EAAEALSLAVVAPG  132
              A    L   +PG
Sbjct  121  AIAARAGLPTASPG  134


>gi|336178809|ref|YP_004584184.1| PilT protein domain-containing protein [Frankia symbiont of Datisca 
glomerata]
 gi|334859789|gb|AEH10263.1| PilT protein domain protein [Frankia symbiont of Datisca glomerata]
Length=129

 Score = 87.4 bits (215),  Expect = 7e-16, Method: Compositional matrix adjust.
 Identities = 59/130 (46%), Positives = 82/130 (64%), Gaps = 5/130 (3%)

Query  1    VIYLETSALVKLIRIEVESDALADWLDDRTELRWITSALTEVELSRAIRAVSPEGLPAVP  60
            +IYL++SALVKL+  E+E+ AL  WL  R  +  ++SAL  +E++RA+R   P  LP VP
Sbjct  1    MIYLDSSALVKLVHPELETRALRSWLATRPGVS-VSSALAVLEVTRALRRSDPAALPRVP  59

Query  61   SVLARLDRFEIDAVIRSTAAAYPNPALRSLDAIHLATAQTAGSVAPLTALVTYDNRLKEA  120
             VL+R+    +D  +   AAA  +P LRSLDA+HLATA    +  P    V+YD RL  A
Sbjct  60   DVLSRVMLVPVDQPVIVAAAALTDPLLRSLDALHLATALRLDT--PSLVFVSYDKRLSAA  117

Query  121  A--EALSLAV  128
            A  E L++AV
Sbjct  118  AVQERLNVAV  127


>gi|284989378|ref|YP_003407932.1| PilT protein domain-containing protein [Geodermatophilus obscurus 
DSM 43160]
 gi|284062623|gb|ADB73561.1| PilT protein domain protein [Geodermatophilus obscurus DSM 43160]
Length=130

 Score = 85.5 bits (210),  Expect = 2e-15, Method: Compositional matrix adjust.
 Identities = 59/131 (46%), Positives = 76/131 (59%), Gaps = 2/131 (1%)

Query  1    VIYLETSALVKLIRIEVESDALADWLDDRTELRWITSALTEVELSRAIRAVSPEGLPAVP  60
            +I +++SALVKL+  E ES AL  WL  R  L    S L  VEL RA+   +P G+P   
Sbjct  1    MIAIDSSALVKLVLDEPESAALEGWLTSRAPLSVAASDLVRVELIRAVARAAPAGVPRAR  60

Query  61   SVLARLDRFEIDAVIRSTAAAYPNPALRSLDAIHLATAQTAGSVAPLTALVTYDNRLKEA  120
            ++L  +D   +   +  TAA    P+LRSLDA+HLATA + GS   L A V YD RL +A
Sbjct  61   TLLTGVDLVPVTRDLLETAADLGPPSLRSLDALHLATALSLGSA--LDAFVVYDERLAQA  118

Query  121  AEALSLAVVAP  131
            A    L VVAP
Sbjct  119  ATDAGLPVVAP  129


>gi|86741564|ref|YP_481964.1| PilT protein-like protein [Frankia sp. CcI3]
 gi|86568426|gb|ABD12235.1| PilT protein-like [Frankia sp. CcI3]
Length=129

 Score = 84.0 bits (206),  Expect = 7e-15, Method: Compositional matrix adjust.
 Identities = 57/130 (44%), Positives = 75/130 (58%), Gaps = 3/130 (2%)

Query  3    YLETSALVKLIRIEVESDALADWLDDRTELRWITSALTEVELSRAIRAVSPEGLPAVPSV  62
            YL++SAL+KL   E  + AL  WL  R  +  ++SAL  +E++RA+R   P  LP +P V
Sbjct  3    YLDSSALMKLTHPERGTRALRSWLAVRPGV-AVSSALVMLEVTRALRRSDPAALPRIPDV  61

Query  63   LARLDRFEIDAVIRSTAAAYPNPALRSLDAIHLATAQTAGSVAPLTALVTYDNRLKEAAE  122
            L+R+    ID  I  +AAA  +P LRSLDA+HLATA      AP    V+YD RL  AA 
Sbjct  62   LSRITLVPIDQPIMVSAAALTDPLLRSLDALHLATALRLD--APSLVFVSYDKRLSTAAA  119

Query  123  ALSLAVVAPG  132
               L V  P 
Sbjct  120  QEGLTVAVPA  129


>gi|296169352|ref|ZP_06850977.1| PIN family toxin-antitoxin system [Mycobacterium parascrofulaceum 
ATCC BAA-614]
 gi|295895974|gb|EFG75664.1| PIN family toxin-antitoxin system [Mycobacterium parascrofulaceum 
ATCC BAA-614]
Length=130

 Score = 82.0 bits (201),  Expect = 3e-14, Method: Compositional matrix adjust.
 Identities = 60/130 (47%), Positives = 76/130 (59%), Gaps = 4/130 (3%)

Query  2    IYLETSALVKLIRIEVESDALADWLDDRTELRWITSALTEVELSRAIRAVSPEGLPAVPS  61
            IYL++SA+VKL   E ESDAL  +L  RT L  ++SAL   E+ RA+         A   
Sbjct  4    IYLDSSAIVKLAVREPESDALRRYL--RTRLPRVSSALARTEVMRALLHKGESARRAGRR  61

Query  62   VLARLDRFEIDAVIRSTAAAYPNPALRSLDAIHLATAQTAGSVAPLTALVTYDNRLKEAA  121
             LA LD   ID  +   A       LR+LDAIHLATAQ  G    L  L TYD+R+++AA
Sbjct  62   ALASLDLLRIDNRLLDLAGGLLPIELRTLDAIHLATAQRLG--MDLGRLCTYDDRMRDAA  119

Query  122  EALSLAVVAP  131
            EAL +AV+AP
Sbjct  120  EALGMAVIAP  129


>gi|15610520|ref|NP_217901.1| hypothetical protein Rv3384c [Mycobacterium tuberculosis H37Rv]
 gi|31794564|ref|NP_857057.1| hypothetical protein Mb3416c [Mycobacterium bovis AF2122/97]
 gi|121639308|ref|YP_979532.1| hypothetical protein BCG_3453c [Mycobacterium bovis BCG str. 
Pasteur 1173P2]
 56 more sequence titles
 Length=130

 Score = 81.6 bits (200),  Expect = 4e-14, Method: Compositional matrix adjust.
 Identities = 56/130 (44%), Positives = 74/130 (57%), Gaps = 4/130 (3%)

Query  2    IYLETSALVKLIRIEVESDALADWLDDRTELRWITSALTEVELSRAIRAVSPEGLPAVPS  61
            IYL++SA+VKL   E ESDAL  +L  RT    ++SAL   E+ RA+         A   
Sbjct  4    IYLDSSAIVKLAVREPESDALRRYL--RTRHPRVSSALARAEVMRALLDKGESARKAGRR  61

Query  62   VLARLDRFEIDAVIRSTAAAYPNPALRSLDAIHLATAQTAGSVAPLTALVTYDNRLKEAA  121
             LA LD   +D  +   A       LR+LDAIHLATAQ  G    L  L TYD+R+++AA
Sbjct  62   ALAHLDLLRVDKRVLDLAGGLLPFELRTLDAIHLATAQRLG--VDLGRLCTYDDRMRDAA  119

Query  122  EALSLAVVAP  131
            + L +AV+AP
Sbjct  120  KTLGMAVIAP  129


>gi|15842977|ref|NP_338014.1| hypothetical protein MT3492 [Mycobacterium tuberculosis CDC1551]
 gi|308232444|ref|ZP_07664085.1| toxin [Mycobacterium tuberculosis SUMu001]
 gi|308370247|ref|ZP_07666899.1| toxin [Mycobacterium tuberculosis SUMu002]
 19 more sequence titles
 Length=131

 Score = 81.6 bits (200),  Expect = 4e-14, Method: Compositional matrix adjust.
 Identities = 56/130 (44%), Positives = 74/130 (57%), Gaps = 4/130 (3%)

Query  2    IYLETSALVKLIRIEVESDALADWLDDRTELRWITSALTEVELSRAIRAVSPEGLPAVPS  61
            IYL++SA+VKL   E ESDAL  +L  RT    ++SAL   E+ RA+         A   
Sbjct  5    IYLDSSAIVKLAVREPESDALRRYL--RTRHPRVSSALARAEVMRALLDKGESARKAGRR  62

Query  62   VLARLDRFEIDAVIRSTAAAYPNPALRSLDAIHLATAQTAGSVAPLTALVTYDNRLKEAA  121
             LA LD   +D  +   A       LR+LDAIHLATAQ  G    L  L TYD+R+++AA
Sbjct  63   ALAHLDLLRVDKRVLDLAGGLLPFELRTLDAIHLATAQRLG--VDLGRLCTYDDRMRDAA  120

Query  122  EALSLAVVAP  131
            + L +AV+AP
Sbjct  121  KTLGMAVIAP  130


>gi|340628364|ref|YP_004746816.1| hypothetical protein MCAN_34091 [Mycobacterium canettii CIPT 
140010059]
 gi|340006554|emb|CCC45740.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059]
Length=127

 Score = 77.8 bits (190),  Expect = 5e-13, Method: Compositional matrix adjust.
 Identities = 59/130 (46%), Positives = 77/130 (60%), Gaps = 4/130 (3%)

Query  2    IYLETSALVKLIRIEVESDALADWLDDRTELRWITSALTEVELSRAIRAVSPEGLPAVPS  61
            +YL++SA+VKL   E ESDAL  +L  RT    ++SAL   E+ RA+         A   
Sbjct  1    MYLDSSAIVKLAVREPESDALRRYL--RTRRPRVSSALARAEVMRALLRQGESARKAGRR  58

Query  62   VLARLDRFEIDAVIRSTAAAYPNPALRSLDAIHLATAQTAGSVAPLTALVTYDNRLKEAA  121
            VLA LD   ID  +   A A     LR+LDAIHLATAQ  G    L  L TYD+R+++AA
Sbjct  59   VLASLDLLRIDTRVLDLAGALLPFELRTLDAIHLATAQRLG--VDLGRLCTYDDRMRDAA  116

Query  122  EALSLAVVAP  131
            +AL +AV+AP
Sbjct  117  DALGMAVIAP  126


>gi|307700859|ref|ZP_07637884.1| toxin-antitoxin system, toxin component, PIN family [Mobiluncus 
mulieris FB024-16]
 gi|307613854|gb|EFN93098.1| toxin-antitoxin system, toxin component, PIN family [Mobiluncus 
mulieris FB024-16]
Length=133

 Score = 77.8 bits (190),  Expect = 5e-13, Method: Compositional matrix adjust.
 Identities = 56/132 (43%), Positives = 71/132 (54%), Gaps = 3/132 (2%)

Query  1    VIYLETSALVKLIRIEVESDALADWLDDRTELRWITSALTEVELSRAIRAVSPEGLPAVP  60
            V YL+TSALVK +  E ES+A A W+    +    TS  T VEL R    +         
Sbjct  2    VFYLDTSALVKALHQEAESEAFAQWMAANAQ-HCYTSDFTRVELLRVTGRLGAATRVQAR  60

Query  61   SVLARLDRFEIDAVIRSTAAAYPNPALRSLDAIHLATAQTAGSVAPLTALVTYDNRLKEA  120
            +VL  L+   I   I  TA       LRSLDAIHLATA   G    L ALVTYD RL +A
Sbjct  61   AVLDALNLVAISPAICDTAGLLEPATLRSLDAIHLATALQLGD--DLEALVTYDLRLGQA  118

Query  121  AEALSLAVVAPG  132
            A+ L++ +++PG
Sbjct  119  AQMLAIPLLSPG  130


>gi|336179976|ref|YP_004585351.1| PilT protein domain-containing protein [Frankia symbiont of Datisca 
glomerata]
 gi|334860956|gb|AEH11430.1| PilT protein domain protein [Frankia symbiont of Datisca glomerata]
Length=138

 Score = 77.8 bits (190),  Expect = 5e-13, Method: Compositional matrix adjust.
 Identities = 57/136 (42%), Positives = 74/136 (55%), Gaps = 4/136 (2%)

Query  2    IYLETSALVKLIRIEVESDALADWLDDRTE-LRWITSALTEVELSRAIRAVSPEGL-PAV  59
            +YL+TSAL KL   E E+  L  W  D+ E LR ++S L  VEL+R +  V+P  L PA 
Sbjct  5    VYLDTSALAKLFIAEKETPDLRQWFADQVEPLRLVSSTLLAVELTRLLNLVNPTMLGPAE  64

Query  60   PSVLARLDRFEIDAVIRSTAAAYPNPALRSLDAIHLATAQTAGSVAPLTALVTYDNRLKE  119
              + A +D  EI   +   AA  P P LR+LDAIHLATA        L  +++YD  L E
Sbjct  65   SFLSADVDLVEITPPLLGDAARVPPPRLRTLDAIHLATALDLRDS--LDVVLSYDKLLVE  122

Query  120  AAEALSLAVVAPGQAR  135
            A  A  L   +PG  R
Sbjct  123  AVHASGLPAASPGAGR  138


>gi|269978026|ref|ZP_06184976.1| toxin-antitoxin system, toxin component, PIN family [Mobiluncus 
mulieris 28-1]
 gi|269933535|gb|EEZ90119.1| toxin-antitoxin system, toxin component, PIN family [Mobiluncus 
mulieris 28-1]
Length=133

 Score = 77.4 bits (189),  Expect = 7e-13, Method: Compositional matrix adjust.
 Identities = 56/132 (43%), Positives = 71/132 (54%), Gaps = 3/132 (2%)

Query  1    VIYLETSALVKLIRIEVESDALADWLDDRTELRWITSALTEVELSRAIRAVSPEGLPAVP  60
            V YL+TSALVK +  E ES+A A W+    +    TS  T VEL R    +         
Sbjct  2    VFYLDTSALVKALHQEAESEAFAQWMAANAQ-HCYTSDFTRVELLRVAGRLGAATRVQAR  60

Query  61   SVLARLDRFEIDAVIRSTAAAYPNPALRSLDAIHLATAQTAGSVAPLTALVTYDNRLKEA  120
            +VL  L+   I   I  TA       LRSLDAIHLATA   G    L ALVTYD RL +A
Sbjct  61   AVLDALNLVAISPAICDTAGLLEPATLRSLDAIHLATALQLGD--DLEALVTYDLRLGQA  118

Query  121  AEALSLAVVAPG  132
            A+ L++ +++PG
Sbjct  119  AQMLAIPLLSPG  130


>gi|336176937|ref|YP_004582312.1| hypothetical protein FsymDg_0881 [Frankia symbiont of Datisca 
glomerata]
 gi|334857917|gb|AEH08391.1| hypothetical protein FsymDg_0881 [Frankia symbiont of Datisca 
glomerata]
Length=132

 Score = 76.3 bits (186),  Expect = 1e-12, Method: Compositional matrix adjust.
 Identities = 54/134 (41%), Positives = 72/134 (54%), Gaps = 5/134 (3%)

Query  1    VIYLETSALVKLIRIEVESDALADWLDDRTELRWITSALTEVELSRAIRAVSPEG---LP  57
            +IYL++ ALVKL+  E E+ AL  +L        +TS L   E+ RA+R  + +      
Sbjct  1    MIYLDSCALVKLVVTEAETSALRAFLSAHAGYPQVTSLLARTEVVRAVRRATADDADLYK  60

Query  58   AVPSVLARLDRFEIDAVIRSTAAAYPNPALRSLDAIHLATAQTAGSVAPLTALVTYDNRL  117
            A  ++L RLD   +D  I   A A  +P +R+LDAIHLA A+  G    LTA VTYD RL
Sbjct  61   AAVTMLNRLDHIILDRPILDDAGAVADPLVRTLDAIHLAAARRLGD--SLTAFVTYDRRL  118

Query  118  KEAAEALSLAVVAP  131
              AA      V AP
Sbjct  119  ATAALDFGFPVRAP  132


>gi|120402717|ref|YP_952546.1| PilT domain-containing protein [Mycobacterium vanbaalenii PYR-1]
 gi|119955535|gb|ABM12540.1| PilT protein domain protein [Mycobacterium vanbaalenii PYR-1]
Length=134

 Score = 76.3 bits (186),  Expect = 1e-12, Method: Compositional matrix adjust.
 Identities = 58/133 (44%), Positives = 76/133 (58%), Gaps = 3/133 (2%)

Query  1    VIYLETSALVKLIRIEVESDALADWLDDR-TELRWITSALTEVELSRAIRAVSPEGLPAV  59
            +IYL+TSA+VKL+  E ES+ L DWL++R T    +TS +  VEL RA      E + A 
Sbjct  1    MIYLDTSAMVKLVVAEPESEELIDWLNERLTHDPIVTSIIGRVELHRAALRAGAEAMAAA  60

Query  60   PSVLARLDRFEIDAVIRSTAAAYPNPALRSLDAIHLATAQTAGSVAPLTALVTYDNRLKE  119
              VL  +D   +   I + A       LR+LDA+HLATA+       LTA+  YD RL +
Sbjct  61   REVLDGVDTLVLTEPIAALAGTMVPAELRTLDALHLATAEIHRE--GLTAICAYDRRLVD  118

Query  120  AAEALSLAVVAPG  132
            AA A  L VVAPG
Sbjct  119  AARARKLPVVAPG  131


>gi|334337553|ref|YP_004542705.1| PilT protein domain protein [Isoptericola variabilis 225]
 gi|334107921|gb|AEG44811.1| PilT protein domain protein [Isoptericola variabilis 225]
Length=149

 Score = 76.3 bits (186),  Expect = 2e-12, Method: Compositional matrix adjust.
 Identities = 56/131 (43%), Positives = 73/131 (56%), Gaps = 3/131 (2%)

Query  3    YLETSALVKLIRIEVESDALADWLDDRTELRWITSALTEVELSRAIRAVSPEGLPAVPSV  62
            YL+TSALVKL+  E ES AL  W+D   + R ++S L   EL RA+R  +PE      +V
Sbjct  3    YLDTSALVKLVVREPESAALKKWVDANDD-RLVSSDLARTELLRAVRRAAPEHAVTARAV  61

Query  63   LARLDRFEIDAVIRSTAAAYPNPALRSLDAIHLATAQTAGSVAPLTALVTYDNRLKEAAE  122
            L  +D   +       AA      +RSLDA+HLATA   G    L ++VTYD RL +AA 
Sbjct  62   LDAVDLLALTTADFEAAAHLDPDIVRSLDALHLATALRLGD--ELESMVTYDVRLADAAR  119

Query  123  ALSLAVVAPGQ  133
               +AV APG 
Sbjct  120  YHGVAVTAPGS  130


>gi|296166224|ref|ZP_06848663.1| PIN family toxin-antitoxin system [Mycobacterium parascrofulaceum 
ATCC BAA-614]
 gi|295898408|gb|EFG77975.1| PIN family toxin-antitoxin system [Mycobacterium parascrofulaceum 
ATCC BAA-614]
Length=131

 Score = 75.1 bits (183),  Expect = 3e-12, Method: Compositional matrix adjust.
 Identities = 61/132 (47%), Positives = 75/132 (57%), Gaps = 8/132 (6%)

Query  3    YLETSALVKLIRIEVESDALADWLDDRTELRWITSALTEVELSRAIRAVSPEGLPAVPSV  62
            YL+TSALVKL+  E ES AL ++L         T+AL   EL   IRAVS  G  AV   
Sbjct  4    YLDTSALVKLVVAEDESTALQEYLRAVAADTLFTAALARTEL---IRAVSGAGAGAVSQA  60

Query  63   LARLDRFEIDAVIRS--TAAAYPNPA-LRSLDAIHLATAQTAGSVAPLTALVTYDNRLKE  119
               LD+ +   + R    AAA   PA LR+LDAIHLA AQ AG+   L A+VTYD R+  
Sbjct  61   RRILDQLDTINLTRGLLDAAADLRPARLRTLDAIHLAAAQRAGT--DLRAVVTYDTRMAA  118

Query  120  AAEALSLAVVAP  131
            AA  L + + AP
Sbjct  119  AAADLGIVIEAP  130


>gi|182435669|ref|YP_001823388.1| hypothetical protein SGR_1876 [Streptomyces griseus subsp. griseus 
NBRC 13350]
 gi|178464185|dbj|BAG18705.1| hypothetical protein [Streptomyces griseus subsp. griseus NBRC 
13350]
Length=144

 Score = 74.7 bits (182),  Expect = 4e-12, Method: Compositional matrix adjust.
 Identities = 54/145 (38%), Positives = 75/145 (52%), Gaps = 16/145 (11%)

Query  1    VIYLETSALVKLIRIEVESDALADWLDDRTELRWITSALTEVELSRAIR--AVSPEG---  55
            +IYL++ ALVKLI+ E ++DAL  +L++R + R +TS L   E+ R IR     P+G   
Sbjct  1    MIYLDSCALVKLIKREKDTDALVAFLEERPQQRQVTSDLAVTEIMRVIRRARCGPQGQLL  60

Query  56   ---------LPAVPSVLARLDRFEIDAVIRSTAAAYPNPALRSLDAIHLATAQTAGSVAP  106
                     L A    L   D   +D  +   A A     ++SLDAIHLA+A   G    
Sbjct  61   IDDLTFTRLLEAAEKRLNATDLVTLDLALLEEAGALEEFNIKSLDAIHLASALMLGP--S  118

Query  107  LTALVTYDNRLKEAAEALSLAVVAP  131
            LT+ VTYD  L+  AE   L V +P
Sbjct  119  LTSFVTYDGGLRGHAENRGLPVFSP  143


>gi|326382371|ref|ZP_08204063.1| toxin [Gordonia neofelifaecis NRRL B-59395]
 gi|326199101|gb|EGD56283.1| toxin [Gordonia neofelifaecis NRRL B-59395]
Length=142

 Score = 73.6 bits (179),  Expect = 1e-11, Method: Compositional matrix adjust.
 Identities = 57/137 (42%), Positives = 69/137 (51%), Gaps = 5/137 (3%)

Query  1    VIYLETSALVKLIRIEVESDALADWLDDRTEL--RWITSALTEVELSRAI-RAVSPEGLP  57
            +IYL+TSALVKL+  E ES  L  WLD +       ++  L  VE+ R + R   P  L 
Sbjct  1    MIYLDTSALVKLLVAEAESADLVSWLDTQVNSGENLVSGDLARVEVMRTVARLDEPGLLD  60

Query  58   AVPSVLARLDRFEIDAVIRSTAAAYPNPALRSLDAIHLATAQTAGSVAPLTALVTYDNRL  117
                +L  LD       +   A       LRS+DAIHLA A   GS   LTA V YD RL
Sbjct  61   DARMMLDGLDSIPTSETVVDEATVIGPSTLRSVDAIHLAAASQLGSA--LTAFVAYDVRL  118

Query  118  KEAAEALSLAVVAPGQA  134
             +AA  L L   APGQA
Sbjct  119  HDAAAELGLPASAPGQA  135


>gi|229821860|ref|YP_002883386.1| twitching mobility protein PilT [Beutenbergia cavernae DSM 12333]
 gi|229567773|gb|ACQ81624.1| PilT protein domain protein [Beutenbergia cavernae DSM 12333]
Length=131

 Score = 70.1 bits (170),  Expect = 9e-11, Method: Compositional matrix adjust.
 Identities = 55/130 (43%), Positives = 71/130 (55%), Gaps = 4/130 (3%)

Query  3    YLETSALVKLIRIEVESDALADWLDDRTELRWITSALTEVELSRAIRAVSPEGLPAVPSV  62
            YL+TSA  KLI +E ES ALAD+L    +   +TS +  VEL R    + P        +
Sbjct  5    YLDTSASAKLIAVEAESAALADYLRASPDAEAVTSVVGIVELLRVGARLGPAQRLRAVDL  64

Query  63   LARLDRFEIDAVIRSTAAAYPNPALRSLDAIHLATAQTAGSVAPLTALVTYDNRLKEAAE  122
             ARL    +   I   AA      LR+LDAIH+A+A  AG+     ++V+YD RL EAA 
Sbjct  65   AARLGTIALTESIARAAADAAPANLRTLDAIHVASAVVAGA----ESVVSYDARLSEAAV  120

Query  123  ALSLAVVAPG  132
            A  L VVAPG
Sbjct  121  AAGLRVVAPG  130


>gi|111220042|ref|YP_710836.1| hypothetical protein FRAAL0552 [Frankia alni ACN14a]
 gi|111147574|emb|CAJ59227.1| hypothetical protein; putative PilT domain [Frankia alni ACN14a]
Length=138

 Score = 68.9 bits (167),  Expect = 3e-10, Method: Compositional matrix adjust.
 Identities = 53/133 (40%), Positives = 75/133 (57%), Gaps = 4/133 (3%)

Query  2    IYLETSALVKLIRIEVESDALADWLDDRTE-LRWITSALTEVELSRAIRAVSPEGLPAVP  60
            IYL+TSAL K+   E ESD L  WL ++ + LR ++SAL  VEL+R +  ++P  L    
Sbjct  5    IYLDTSALAKMFIAEKESDDLRQWLVEQVQPLRLVSSALLAVELTRLLGLINPAILGLAE  64

Query  61   SVLAR-LDRFEIDAVIRSTAAAYPNPALRSLDAIHLATAQTAGSVAPLTALVTYDNRLKE  119
            S L+  +D  +I   + + A+  P   LR+LDAIHLATA        L  +++YD  L E
Sbjct  65   SFLSSDVDLVQITPPLLADASRVPPARLRTLDAIHLATALDLRD--SLDIVLSYDKLLIE  122

Query  120  AAEALSLAVVAPG  132
            A  A  L   +PG
Sbjct  123  AVSASGLVPASPG  135


>gi|108802491|ref|YP_642687.1| hypothetical protein Mmcs_5531 [Mycobacterium sp. MCS]
 gi|119855319|ref|YP_935922.1| hypothetical protein Mkms_5933 [Mycobacterium sp. KMS]
 gi|108772910|gb|ABG11631.1| conserved hypothetical protein [Mycobacterium sp. MCS]
 gi|119698036|gb|ABL95107.1| conserved hypothetical protein [Mycobacterium sp. KMS]
Length=133

 Score = 68.6 bits (166),  Expect = 3e-10, Method: Compositional matrix adjust.
 Identities = 50/133 (38%), Positives = 73/133 (55%), Gaps = 4/133 (3%)

Query  1    VIYLETSALVKLIRIEVESDALADWLDDRTELRWITSALTEVELSRAIRAVSPEGLPAVP  60
            +IYL+ +A++KLI    ES AL  +L   T+ RW T AL+ +++ RA  A+  E      
Sbjct  1    MIYLDATAIMKLIAQAPESAALTTYLRAHTDTRWFTCALSRLDVVRATAALPAEATEHAH  60

Query  61   SVLARLDRFEI-DAVIRSTAAAYPNPALRSLDAIHLATAQTAGSVAPLTALVTYDNRLKE  119
             +LA LD   + D ++ +  A  P PA R+ DA+H+A A +AG    L  L+TYD  L  
Sbjct  61   RILAGLDTVAVTDRLLDAAVALTPAPA-RTTDALHIAAALSAGPR--LRTLITYDPDLSR  117

Query  120  AAEALSLAVVAPG  132
            AA    +  V PG
Sbjct  118  AAADHHINTVHPG  130


>gi|240170730|ref|ZP_04749389.1| hypothetical protein MkanA1_15552 [Mycobacterium kansasii ATCC 
12478]
Length=136

 Score = 65.1 bits (157),  Expect = 4e-09, Method: Compositional matrix adjust.
 Identities = 53/138 (39%), Positives = 69/138 (50%), Gaps = 5/138 (3%)

Query  1    VIYLETSALVKLIRIEVESDALADWLDDRTELRWI--TSALTEVELSRAIRAVSPEGLPA  58
            +IYL+TSAL KL+  E E+D L +WL   T+      TSAL+ VEL R +      G   
Sbjct  1    MIYLDTSALTKLLIAEPETDELRNWLTVHTDQGEFAATSALSRVELMRVVARQGESGQAE  60

Query  59   -VPSVLARLDRFEIDAVIRSTAAAYPNPALRSLDAIHLATAQTAGSVAPLTALVTYDNRL  117
                +L  LD   + A + + A       LR+LDAIHLA A        LTA VTYD+RL
Sbjct  61   RARYLLDGLDILPLTAPVINLAETIGPATLRTLDAIHLAAATQIKR--ELTAFVTYDHRL  118

Query  118  KEAAEALSLAVVAPGQAR  135
                  + L   +PG  R
Sbjct  119  LAGCLEVGLVTASPGAVR  136


>gi|284044421|ref|YP_003394761.1| hypothetical protein Cwoe_2967 [Conexibacter woesei DSM 14684]
 gi|283948642|gb|ADB51386.1| conserved hypothetical protein [Conexibacter woesei DSM 14684]
Length=133

 Score = 64.3 bits (155),  Expect = 5e-09, Method: Compositional matrix adjust.
 Identities = 53/131 (41%), Positives = 66/131 (51%), Gaps = 4/131 (3%)

Query  1    VIYLETSALVKLIRIEVESDALADWLDDRTELRWITSALTEVELSRAIRAVSPEGLPAVP  60
            V YL++SALVKL+  E ES  L   L  R+    ++ AL  VE+ RA+ A  PE      
Sbjct  6    VCYLDSSALVKLVVREPESATLTRHL--RSRPVRVSCALATVEVVRAVGAHGPEATDRAR  63

Query  61   SVLARLDRFEIDAVIRSTAAAYPNPALRSLDAIHLATAQTAGSVAPLTALVTYDNRLKEA  120
             VL  +D   +D  +   AA    P LRSLDAIHLA A           L+TYD R+   
Sbjct  64   QVLDGVDMIRLDDPLLHAAATLDGPLLRSLDAIHLAAALALREDE--VELITYDRRMAAH  121

Query  121  AEALSLAVVAP  131
            AE L   V AP
Sbjct  122  AEQLGFVVSAP  132


>gi|284029011|ref|YP_003378942.1| hypothetical protein Kfla_1038 [Kribbella flavida DSM 17836]
 gi|283808304|gb|ADB30143.1| hypothetical protein Kfla_1038 [Kribbella flavida DSM 17836]
Length=134

 Score = 59.3 bits (142),  Expect = 2e-07, Method: Compositional matrix adjust.
 Identities = 51/137 (38%), Positives = 72/137 (53%), Gaps = 10/137 (7%)

Query  1    VIYLETSALVKLIRIEVESDALADW---LDDRTELRWITSALTEVELSRAI--RAVSPEG  55
            +IYL+  AL+K I+ E ES AL  W   L   TEL  +TS L ++E++R +    V  + 
Sbjct  1    MIYLDACALLKFIKPEKESAALRKWREALPPDTEL--LTSELAKLEITRTLLRAGVDHQQ  58

Query  56   LPAVPSVLAR-LDRFEIDAVIRSTAAAYPNPALRSLDAIHLATAQTAGSVAPLTALVTYD  114
            +P       R +   ++ + + + A AY    L SLDAIHLA+A+     A L   VTYD
Sbjct  59   VPYFTGQAVRGIYVVDLSSTVLARAMAYRTARLGSLDAIHLASAEP--FRADLEQFVTYD  116

Query  115  NRLKEAAEALSLAVVAP  131
              L  AA  L   V+AP
Sbjct  117  KELSGAAAELGFPVLAP  133


>gi|31794589|ref|NP_857082.1| hypothetical protein Mb3442 [Mycobacterium bovis AF2122/97]
 gi|121639333|ref|YP_979557.1| hypothetical protein BCG_3478 [Mycobacterium bovis BCG str. Pasteur 
1173P2]
 gi|148824615|ref|YP_001289369.1| hypothetical protein TBFG_13442 [Mycobacterium tuberculosis F11]
 67 more sequence titles
 Length=136

 Score = 57.4 bits (137),  Expect = 6e-07, Method: Compositional matrix adjust.
 Identities = 50/138 (37%), Positives = 64/138 (47%), Gaps = 5/138 (3%)

Query  1    VIYLETSALVKLIRIEVESDALADWLDDRTELRW--ITSALTEVELSRAI-RAVSPEGLP  57
            +IY++TSAL KL+  E E+  L  WL  ++       TS L  VEL R + R   P    
Sbjct  1    MIYMDTSALTKLLISEPETTELRTWLTAQSGQGEDAATSTLGRVELMRVVARYGQPGQTE  60

Query  58   AVPSVLARLDRFEIDAVIRSTAAAYPNPALRSLDAIHLATAQTAGSVAPLTALVTYDNRL  117
                +L  LD   +   +   A       LRSLDAIHLA A  A     LTA VTYD+RL
Sbjct  61   RARYLLDGLDILPLTEPVIGLAETIGPATLRSLDAIHLAAA--AQIKRELTAFVTYDHRL  118

Query  118  KEAAEALSLAVVAPGQAR  135
                  +     +PG  R
Sbjct  119  LSGCREVGFVTASPGAVR  136


>gi|256372388|ref|YP_003110212.1| PilT protein domain-containing protein [Acidimicrobium ferrooxidans 
DSM 10331]
 gi|256008972|gb|ACU54539.1| PilT protein domain protein [Acidimicrobium ferrooxidans DSM 
10331]
Length=130

 Score = 56.6 bits (135),  Expect = 1e-06, Method: Compositional matrix adjust.
 Identities = 53/131 (41%), Positives = 68/131 (52%), Gaps = 3/131 (2%)

Query  1    VIYLETSALVKLIRIEVESDALADWLDDRTELRWITSALTEVELSRAIRAVSPEGLPAVP  60
            V YL+TSA  KL+  E  S+A+A W     E + I S L   EL RA R  +P+ +    
Sbjct  2    VFYLDTSAAAKLVVAEPASEAMASWAASH-ETQVIASDLLRTELLRATRRAAPDRMQRAR  60

Query  61   SVLARLDRFEIDAVIRSTAAAYPNPALRSLDAIHLATAQTAGSVAPLTALVTYDNRLKEA  120
            SVL  L  F + +     AA      LRSLDA+HLA A   G    L  +VTYDNR+  A
Sbjct  61   SVLDALTLFNLTSATLERAATLDPEELRSLDALHLAAALELGD--ELDGIVTYDNRMAAA  118

Query  121  AEALSLAVVAP  131
            A    +AV+ P
Sbjct  119  ASQYGVAVIVP  129


>gi|15610544|ref|NP_217925.1| hypothetical protein Rv3408 [Mycobacterium tuberculosis H37Rv]
 gi|148663272|ref|YP_001284795.1| hypothetical protein MRA_3448 [Mycobacterium tuberculosis H37Ra]
 gi|167968706|ref|ZP_02550983.1| hypothetical protein MtubH3_11975 [Mycobacterium tuberculosis 
H37Ra]
 gi|307086187|ref|ZP_07495300.1| toxin [Mycobacterium tuberculosis SUMu012]
 gi|332278240|sp|Q50717.3|VPC47_MYCTU RecName: Full=Probable ribonuclease VapC47; Short=Probable RNase 
VapC47; AltName: Full=Toxin VapC47
 gi|1449379|emb|CAB01015.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium tuberculosis H37Rv]
 gi|148507424|gb|ABQ75233.1| hypothetical protein MRA_3448 [Mycobacterium tuberculosis H37Ra]
 gi|308364354|gb|EFP53205.1| toxin [Mycobacterium tuberculosis SUMu012]
Length=136

 Score = 55.5 bits (132),  Expect = 3e-06, Method: Compositional matrix adjust.
 Identities = 50/141 (36%), Positives = 66/141 (47%), Gaps = 11/141 (7%)

Query  1    VIYLETSALVKLIRIEVESDALADWLDDRTELRW--ITSALTEVELSRAIRAVSPEGLPA  58
            +IY++TSAL KL+  E E+  L  WL  ++       TS L  VE   ++R V+  G P 
Sbjct  1    MIYMDTSALTKLLISEPETTELRTWLTAQSGQGEDAATSTLGRVE---SMRVVARYGQPG  57

Query  59   VPS----VLARLDRFEIDAVIRSTAAAYPNPALRSLDAIHLATAQTAGSVAPLTALVTYD  114
                   +L  LD   +   +   A       LRSLDAIHLA A  A     LTA VTYD
Sbjct  58   QTERARYLLDGLDILPLTEPVIGLAETIGPATLRSLDAIHLAAA--AQIKRELTAFVTYD  115

Query  115  NRLKEAAEALSLAVVAPGQAR  135
            +RL      +     +PG  R
Sbjct  116  HRLLSGCREVGFVTASPGAVR  136


>gi|325067177|ref|ZP_08125850.1| PilT protein domain-containing protein [Actinomyces oris K20]
Length=131

 Score = 53.5 bits (127),  Expect = 9e-06, Method: Compositional matrix adjust.
 Identities = 52/135 (39%), Positives = 69/135 (52%), Gaps = 11/135 (8%)

Query  1    VIYLETSALVKLIRIEVESDALADWLDDRTE--LRWITSALTEVELSRAIRAVSPEGLPA  58
            V YL+TSA +KL+  E ES+ LA WL   T       +S L   EL  A R        A
Sbjct  3    VYYLDTSAALKLLIEEKESEPLAAWLTSHTTDGDSLCSSFLLHTELHCAARRRGELNQEA  62

Query  59   VPSVLARLDRFEIDAVIRS--TAAAYPNPALRSLDAIHLATAQTAGSVAPLTALVTYDNR  116
            V S+L+ +D  ++    RS  T AA  +  LR+ DAIHL    TA       A+VTYD  
Sbjct  63   VASLLSGIDLIDVS---RSHLTDAARTSMGLRAADAIHL----TAALDIQADAIVTYDIE  115

Query  117  LKEAAEALSLAVVAP  131
            ++ AA   +L+ VAP
Sbjct  116  MQNAARYCNLSPVAP  130


>gi|15843003|ref|NP_338040.1| hypothetical protein MT3516 [Mycobacterium tuberculosis CDC1551]
 gi|308378313|ref|ZP_07668719.1| toxin [Mycobacterium tuberculosis SUMu009]
 gi|308380689|ref|ZP_07669253.1| toxin [Mycobacterium tuberculosis SUMu011]
 gi|13883344|gb|AAK47854.1| hypothetical protein MT3516 [Mycobacterium tuberculosis CDC1551]
 gi|308352931|gb|EFP41782.1| toxin [Mycobacterium tuberculosis SUMu009]
 gi|308360743|gb|EFP49594.1| toxin [Mycobacterium tuberculosis SUMu011]
Length=133

 Score = 52.4 bits (124),  Expect = 2e-05, Method: Compositional matrix adjust.
 Identities = 48/135 (36%), Positives = 61/135 (46%), Gaps = 5/135 (3%)

Query  4    LETSALVKLIRIEVESDALADWLDDRTELRW--ITSALTEVELSRAI-RAVSPEGLPAVP  60
            ++TSAL KL+  E E+  L  WL  ++       TS L  VEL R + R   P       
Sbjct  1    MDTSALTKLLISEPETTELRTWLTAQSGQGEDAATSTLGRVELMRVVARYGQPGQTERAR  60

Query  61   SVLARLDRFEIDAVIRSTAAAYPNPALRSLDAIHLATAQTAGSVAPLTALVTYDNRLKEA  120
             +L  LD   +   +   A       LRSLDAIHLA A  A     LTA VTYD+RL   
Sbjct  61   YLLDGLDILPLTEPVIGLAETIGPATLRSLDAIHLAAA--AQIKRELTAFVTYDHRLLSG  118

Query  121  AEALSLAVVAPGQAR  135
               +     +PG  R
Sbjct  119  CREVGFVTASPGAVR  133


>gi|314971342|gb|EFT15440.1| toxin-antitoxin system, toxin component, PIN domain protein [Propionibacterium 
acnes HL037PA3]
 gi|328906281|gb|EGG26056.1| PilT protein domain protein [Propionibacterium humerusii P08]
Length=71

 Score = 50.8 bits (120),  Expect = 7e-05, Method: Compositional matrix adjust.
 Identities = 30/73 (42%), Positives = 42/73 (58%), Gaps = 4/73 (5%)

Query  59   VPSVLARLDRFEIDAVIRSTAAAYPNPALRSLDAIHLATAQTAGSVAPLTALVTYDNRLK  118
            + S+L ++  + I+    + A   P   LRSLDA+HLATA   G    + ALVTYD RL+
Sbjct  2    ISSLLTKVSLYLIEPAQLTHAGLLPGQNLRSLDALHLATAIDLG----VDALVTYDQRLQ  57

Query  119  EAAEALSLAVVAP  131
              A  + + VVAP
Sbjct  58   STAHEIGMPVVAP  70


>gi|336115824|ref|YP_004570590.1| hypothetical protein MLP_01730 [Microlunatus phosphovorus NM-1]
 gi|334683602|dbj|BAK33187.1| hypothetical protein MLP_01730 [Microlunatus phosphovorus NM-1]
Length=139

 Score = 50.4 bits (119),  Expect = 9e-05, Method: Compositional matrix adjust.
 Identities = 50/132 (38%), Positives = 72/132 (55%), Gaps = 10/132 (7%)

Query  3    YLETS-ALVKLIRIEVESDALADWLDDRTELR--WITSALTEVELSRAIRAVSPEGLPAV  59
            YL++S AL  L+   VE+   A+W D+R      + +S L E+EL+R  R  S + +  V
Sbjct  13   YLDSSVALRVLLAHSVEA---AEWFDERAFAGDAFASSRLLELELTRVFRRESLD-VVEV  68

Query  60   PSVLARLDRFEIDAVIRSTAAAYPNPALRSLDAIHLATAQTAGSVAPLTALVTYDNRLKE  119
               +A L    +D  + + AAA   P LRSLDA+HLA AQ  G  A    +VT+D  + +
Sbjct  69   ADFVAELTLLTVDDALVAEAAAIV-PHLRSLDALHLAGAQRIGVDA--VTIVTHDLGMAK  125

Query  120  AAEALSLAVVAP  131
             AE+L  AV  P
Sbjct  126  TAESLGFAVHDP  137


>gi|78224268|ref|YP_386015.1| hypothetical protein Gmet_3076 [Geobacter metallireducens GS-15]
 gi|78195523|gb|ABB33290.1| conserved hypothetical protein [Geobacter metallireducens GS-15]
Length=142

 Score = 49.3 bits (116),  Expect = 2e-04, Method: Compositional matrix adjust.
 Identities = 48/148 (33%), Positives = 68/148 (46%), Gaps = 22/148 (14%)

Query  1    VIYLETSALVKLIRIEVESDALADWLDD-------RTELRWITSALT----EVELSRAIR  49
            ++YL+TS+LVKL   EV SD +  W++        R     + SALT      +L R   
Sbjct  2    ILYLDTSSLVKLYVEEVCSDTVRQWVESAEAVATCRVAYPEMLSALTRRHNRGDLPREDC  61

Query  50   AVSPEGLPAVPSVLARLDRFEIDA--VIRSTAAAYPNPALRSLDAIHLATAQ--TAGSVA  105
             V  E           LD  EI+A  ++R          LR  DA+HLA A+  +    A
Sbjct  62   EVVAECFAGEWEHFVALDFDEIEAGHLVRKY-------GLRGFDAVHLAAAKLLSNDCGA  114

Query  106  PLTALVTYDNRLKEAAEALSLAVVAPGQ  133
               A  ++DN+L  AAEA   A++A G 
Sbjct  115  IEVAFSSFDNKLNGAAEAEGFALLAAGH  142


>gi|326771646|ref|ZP_08230931.1| toxin-antitoxin system, toxin component, PIN family [Actinomyces 
viscosus C505]
 gi|326637779|gb|EGE38680.1| toxin-antitoxin system, toxin component, PIN family [Actinomyces 
viscosus C505]
Length=131

 Score = 48.9 bits (115),  Expect = 2e-04, Method: Compositional matrix adjust.
 Identities = 49/136 (37%), Positives = 69/136 (51%), Gaps = 11/136 (8%)

Query  1    VIYLETSALVKLIRIEVESDALADWLDDRTE--LRWITSALTEVELSRAIRAVSPEGLPA  58
            V YL+TSA +KL+  E ES+ LA WL   T       +S L   EL  A R  S      
Sbjct  3    VYYLDTSAALKLLIEEKESEPLAAWLTSHTTDGDSLCSSFLLHTELHCAARRRSELDQET  62

Query  59   VPSVLARLDRFEIDAVIRSTA--AAYPNPALRSLDAIHLATAQTAGSVAPLTALVTYDNR  116
            V S+L+ ++  +I    RS    AA  +  LR+ DAIHL  A    +     A++TYD  
Sbjct  63   VASLLSGINLIDIS---RSQLIDAARTSLGLRAADAIHLTVALDIRA----DAIITYDIE  115

Query  117  LKEAAEALSLAVVAPG  132
            ++ AA + +L+ VAP 
Sbjct  116  MQNAARSCNLSPVAPS  131


>gi|340358514|ref|ZP_08681031.1| PilT domain protein [Actinomyces sp. oral taxon 448 str. F0400]
 gi|339886364|gb|EGQ76022.1| PilT domain protein [Actinomyces sp. oral taxon 448 str. F0400]
Length=137

 Score = 47.8 bits (112),  Expect = 5e-04, Method: Compositional matrix adjust.
 Identities = 48/139 (35%), Positives = 67/139 (49%), Gaps = 13/139 (9%)

Query  1    VIYLETSALVKLIRIEVESDALADWL--------DDRTELRWITSALTEVELSRAIRAVS  52
            + YL+TSA +KL+  E ES+ LA WL        D   ++   +S L   EL  A R   
Sbjct  3    IYYLDTSAALKLLIEEDESEPLAQWLNQTVSHSPDSAGDIALCSSFLLSTELHCAARRRR  62

Query  53   PEGLPAVPSVLARLDRFEIDAVIRSTAAAYPNPALRSLDAIHLATAQTAGSVAPLTALVT  112
                 AV ++L+ ++  ++       AA   +  LRS DAIHL  A    S     AL+T
Sbjct  63   ELDEEAVATLLSGVELVDVSREHLLNAAG-DSAGLRSADAIHLTVALDIRS----DALLT  117

Query  113  YDNRLKEAAEALSLAVVAP  131
            YD  ++ AA    L VVAP
Sbjct  118  YDREMRIAARRRGLGVVAP  136


>gi|307701081|ref|ZP_07638106.1| toxin-antitoxin system, toxin component, PIN family [Mobiluncus 
mulieris FB024-16]
 gi|307614076|gb|EFN93320.1| toxin-antitoxin system, toxin component, PIN family [Mobiluncus 
mulieris FB024-16]
Length=87

 Score = 47.4 bits (111),  Expect = 8e-04, Method: Compositional matrix adjust.
 Identities = 31/75 (42%), Positives = 43/75 (58%), Gaps = 2/75 (2%)

Query  61   SVLARLDRFEIDAVIRSTAAAYPNPALRSLDAIHLATAQTAGSVAPLTALVTYDNRLKEA  120
            ++L  L+   I + I   A       LRSLDAIHLATA   G    L ALVTYD RL  A
Sbjct  15   AILDALNLVRISSQICDLAGLLEPTVLRSLDAIHLATALQVGD--DLEALVTYDLRLGVA  72

Query  121  AEALSLAVVAPGQAR  135
            A+ + + +++PG ++
Sbjct  73   AQMVGIPLLSPGYSK  87


>gi|306818894|ref|ZP_07452615.1| conserved hypothetical protein [Mobiluncus mulieris ATCC 35239]
 gi|304648296|gb|EFM45600.1| conserved hypothetical protein [Mobiluncus mulieris ATCC 35239]
Length=97

 Score = 47.0 bits (110),  Expect = 8e-04, Method: Compositional matrix adjust.
 Identities = 31/75 (42%), Positives = 43/75 (58%), Gaps = 2/75 (2%)

Query  61   SVLARLDRFEIDAVIRSTAAAYPNPALRSLDAIHLATAQTAGSVAPLTALVTYDNRLKEA  120
            ++L  L+   I + I   A       LRSLDAIHLATA   G    L ALVTYD RL  A
Sbjct  25   AILDALNLVRISSQICDLAGLLEPTVLRSLDAIHLATALQVGD--DLEALVTYDLRLGVA  82

Query  121  AEALSLAVVAPGQAR  135
            A+ + + +++PG ++
Sbjct  83   AQMVGIPLLSPGYSK  97


>gi|269977174|ref|ZP_06184147.1| toxin-antitoxin system, toxin component, PIN family [Mobiluncus 
mulieris 28-1]
 gi|269934477|gb|EEZ91038.1| toxin-antitoxin system, toxin component, PIN family [Mobiluncus 
mulieris 28-1]
Length=87

 Score = 45.4 bits (106),  Expect = 0.003, Method: Compositional matrix adjust.
 Identities = 31/75 (42%), Positives = 42/75 (56%), Gaps = 2/75 (2%)

Query  61   SVLARLDRFEIDAVIRSTAAAYPNPALRSLDAIHLATAQTAGSVAPLTALVTYDNRLKEA  120
            ++L  L+   I + I   A       LRSLDAIHLATA   G    L ALVTYD RL  A
Sbjct  15   AILDALNLVRISSQICDLAGLLEPAVLRSLDAIHLATALQVGD--DLEALVTYDLRLGVA  72

Query  121  AEALSLAVVAPGQAR  135
            A+   + +++PG ++
Sbjct  73   AQMGGIPLLSPGYSK  87


>gi|227875583|ref|ZP_03993723.1| hypothetical protein HMPREF0577_1024 [Mobiluncus mulieris ATCC 
35243]
 gi|227843919|gb|EEJ54088.1| hypothetical protein HMPREF0577_1024 [Mobiluncus mulieris ATCC 
35243]
Length=97

 Score = 45.4 bits (106),  Expect = 0.003, Method: Compositional matrix adjust.
 Identities = 31/75 (42%), Positives = 42/75 (56%), Gaps = 2/75 (2%)

Query  61   SVLARLDRFEIDAVIRSTAAAYPNPALRSLDAIHLATAQTAGSVAPLTALVTYDNRLKEA  120
            ++L  L+   I + I   A       LRSLDAIHLATA   G    L ALVTYD RL  A
Sbjct  25   AILDALNLVRISSQICDLAGLLEPAVLRSLDAIHLATALQVGD--DLEALVTYDLRLGVA  82

Query  121  AEALSLAVVAPGQAR  135
            A+   + +++PG ++
Sbjct  83   AQMGGIPLLSPGYSK  97


>gi|284045881|ref|YP_003396221.1| hypothetical protein Cwoe_4432 [Conexibacter woesei DSM 14684]
 gi|283950102|gb|ADB52846.1| conserved hypothetical protein [Conexibacter woesei DSM 14684]
Length=131

 Score = 44.3 bits (103),  Expect = 0.007, Method: Compositional matrix adjust.
 Identities = 41/132 (32%), Positives = 69/132 (53%), Gaps = 7/132 (5%)

Query  2    IYLETSALVKLIRIEVESDALADWLDDRTELRWITSALTEVELSR-AIR-AVSPEGLPAV  59
            +YL+TSAL +++  E + DA+   L     +  ++S L  +EL R  +R  ++ E    +
Sbjct  4    VYLDTSALGRVVLDEPDGDAIGAALAGFEAV--VSSRLLRIELHRLGLRTGIASE---EI  58

Query  60   PSVLARLDRFEIDAVIRSTAAAYPNPALRSLDAIHLATAQTAGSVAPLTALVTYDNRLKE  119
               LA +    +D  I + A A    ++ +LDAIHLATA    +   + +++T+D RL E
Sbjct  59   EGWLAGVAIVPLDDAILAAAEAVSPSSVATLDAIHLATALQLAAERHIASIMTFDARLAE  118

Query  120  AAEALSLAVVAP  131
             A    L V+ P
Sbjct  119  GAREHGLDVITP  130


>gi|328953359|ref|YP_004370693.1| hypothetical protein Desac_1665 [Desulfobacca acetoxidans DSM 
11109]
 gi|328453683|gb|AEB09512.1| hypothetical protein Desac_1665 [Desulfobacca acetoxidans DSM 
11109]
Length=148

 Score = 42.4 bits (98),  Expect = 0.026, Method: Compositional matrix adjust.
 Identities = 48/138 (35%), Positives = 66/138 (48%), Gaps = 14/138 (10%)

Query  3    YLETSALVKLIRIEVESDAL------ADWLDDRTELRWI--TSAL-TEVELSRAIRAVSP  53
            + +TSALVKL   E  ++AL      AD     ++L +I  TSAL T+V +    R V  
Sbjct  6    FFDTSALVKLYHQEKGTEALEHLISAADTCIVISDLSFIEITSALATKVRMGLIDRDVFE  65

Query  54   EGLPAVPSVLARLDRFEIDAVIRSTAAAYPNPA-----LRSLDAIHLATAQTAGSVAPLT  108
              L       A  +  E+D  ++  AA           LR+LDA+ LA+A TA   +PL 
Sbjct  66   AVLDCFIRDFAGYEIIEVDHAVKMQAADLLKTIVVTRRLRTLDALQLASALTAARKSPLD  125

Query  109  ALVTYDNRLKEAAEALSL  126
              V  D  L EAA+A  L
Sbjct  126  LFVAADIFLIEAAQAKDL  143


>gi|308274638|emb|CBX31237.1| hypothetical protein N47_E47490 [uncultured Desulfobacterium 
sp.]
Length=149

 Score = 42.0 bits (97),  Expect = 0.028, Method: Compositional matrix adjust.
 Identities = 34/129 (27%), Positives = 61/129 (48%), Gaps = 16/129 (12%)

Query  2    IYLETSALVKLIRIEVESDALADWLDDRTELRWITSA-LTEVELSRAI------RAVSPE  54
            +YL+++AL+KL   E  ++ L   LD+  +   +T A +T++E   A       + +  E
Sbjct  3    LYLDSNALIKLYHEEAGTNELVKLLDENEDNLILTIADITKIEFYSAFLKRVRKKEIKYE  62

Query  55   G----LPAVPSVLARLDRFEIDAVIRSTAAAY-----PNPALRSLDAIHLATAQTAGSVA  105
                 L A  + L   +  E+D ++++ A            L +LD+I LA A  A  + 
Sbjct  63   TVKKVLSAFENDLYMFNFIEVDNIVKAIAVDLLKTIANKQGLTTLDSIQLAAAINANQIF  122

Query  106  PLTALVTYD  114
            P+ + VT D
Sbjct  123  PIDSFVTSD  131


>gi|336177878|ref|YP_004583253.1| hypothetical protein FsymDg_1894 [Frankia symbiont of Datisca 
glomerata]
 gi|334858858|gb|AEH09332.1| hypothetical protein FsymDg_1894 [Frankia symbiont of Datisca 
glomerata]
Length=136

 Score = 41.6 bits (96),  Expect = 0.041, Method: Compositional matrix adjust.
 Identities = 42/138 (31%), Positives = 66/138 (48%), Gaps = 10/138 (7%)

Query  2    IYLETSALVKLIRIEVESDALADWLDDRTELR--WITSALTEVELSRAIRAV----SPEG  55
            IYL++SA++K +  E +S AL   +D   E     ++S+L  +E++ A+RA     S   
Sbjct  3    IYLDSSAILKRLVAETDSLALVAAVDKHHEDGDLLVSSSLAWIEVTHALRARFGTDSASA  62

Query  56   LPAVPSVLARLDRFEIDAVIRSTAAAYPNPALRSLDAIHLATAQTAGSVAPLTALVTYDN  115
                 + L+ +    +   + S A       LRSLDAIHL +A    +      ++TYD+
Sbjct  63   TVHADAALSGVAEHPLSPEVVSLARRIGPAVLRSLDAIHLTSALLLDA----DQMLTYDD  118

Query  116  RLKEAAEALSLAVVAPGQ  133
            RL  A     L   APG 
Sbjct  119  RLAMACAQSGLVFTAPGH  136


>gi|343524031|ref|ZP_08760991.1| putative toxin-antitoxin system, toxin component, PIN family 
[Actinomyces sp. oral taxon 175 str. F0384]
 gi|343399012|gb|EGV11537.1| putative toxin-antitoxin system, toxin component, PIN family 
[Actinomyces sp. oral taxon 175 str. F0384]
Length=133

 Score = 40.8 bits (94),  Expect = 0.073, Method: Compositional matrix adjust.
 Identities = 42/134 (32%), Positives = 67/134 (50%), Gaps = 7/134 (5%)

Query  1    VIYLETS-ALVKLIRIEVESDALADWLDDRTELRWITSALTEVELSRAIRAVSPEGLPAV  59
            +IYL+TS AL+ L+      +A    +D       ++S L  VE++RA      + +  V
Sbjct  1    MIYLDTSVALLSLLGQPGADEAAQLIMDAHATEGLVSSCLLTVEMARAAHREHFD-IRVV  59

Query  60   PSVLARLDRFEI--DAVIRSTAAAYPNPALRSLDAIHLATAQTAGSVAPLTALVTYDNRL  117
               +A ++  EI  D + R++A       L+SLDAIHLATA           ++T+D RL
Sbjct  60   DEFIAGVELIEIGPDVIARASAL---TGELKSLDAIHLATATLLDDPRHPVTVLTHDARL  116

Query  118  KEAAEALSLAVVAP  131
             +AA +  L  + P
Sbjct  117  ADAARSRGLGAIDP  130



Lambda     K      H
   0.317    0.129    0.353 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 129391415580


  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
    Posted date:  Sep 5, 2011  4:36 AM
  Number of letters in database: 5,219,829,388
  Number of sequences in database:  15,229,318



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40