BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv1962c
Length=135
Score E
Sequences producing significant alignments: (Bits) Value
gi|15609099|ref|NP_216478.1| hypothetical protein Rv1962c [Mycob... 257 4e-67
gi|296169436|ref|ZP_06851057.1| PIN family toxin-antitoxin syste... 207 4e-52
gi|336178644|ref|YP_004584019.1| PilT protein domain-containing ... 137 6e-31
gi|300790923|ref|YP_003771214.1| hypothetical protein AMED_9123 ... 133 7e-30
gi|302864894|ref|YP_003833531.1| hypothetical protein Micau_0388... 132 2e-29
gi|315501180|ref|YP_004080067.1| hypothetical protein ML5_0364 [... 131 3e-29
gi|284029018|ref|YP_003378949.1| hypothetical protein Kfla_1046 ... 130 7e-29
gi|288917440|ref|ZP_06411806.1| hypothetical protein FrEUN1fDRAF... 112 1e-23
gi|336178692|ref|YP_004584067.1| hypothetical protein FsymDg_281... 109 2e-22
gi|336178809|ref|YP_004584184.1| PilT protein domain-containing ... 87.4 7e-16
gi|284989378|ref|YP_003407932.1| PilT protein domain-containing ... 85.5 2e-15
gi|86741564|ref|YP_481964.1| PilT protein-like protein [Frankia ... 84.0 7e-15
gi|296169352|ref|ZP_06850977.1| PIN family toxin-antitoxin syste... 82.0 3e-14
gi|15610520|ref|NP_217901.1| hypothetical protein Rv3384c [Mycob... 81.6 4e-14
gi|15842977|ref|NP_338014.1| hypothetical protein MT3492 [Mycoba... 81.6 4e-14
gi|340628364|ref|YP_004746816.1| hypothetical protein MCAN_34091... 77.8 5e-13
gi|307700859|ref|ZP_07637884.1| toxin-antitoxin system, toxin co... 77.8 5e-13
gi|336179976|ref|YP_004585351.1| PilT protein domain-containing ... 77.8 5e-13
gi|269978026|ref|ZP_06184976.1| toxin-antitoxin system, toxin co... 77.4 7e-13
gi|336176937|ref|YP_004582312.1| hypothetical protein FsymDg_088... 76.3 1e-12
gi|120402717|ref|YP_952546.1| PilT domain-containing protein [My... 76.3 1e-12
gi|334337553|ref|YP_004542705.1| PilT protein domain protein [Is... 76.3 2e-12
gi|296166224|ref|ZP_06848663.1| PIN family toxin-antitoxin syste... 75.1 3e-12
gi|182435669|ref|YP_001823388.1| hypothetical protein SGR_1876 [... 74.7 4e-12
gi|326382371|ref|ZP_08204063.1| toxin [Gordonia neofelifaecis NR... 73.6 1e-11
gi|229821860|ref|YP_002883386.1| twitching mobility protein PilT... 70.1 9e-11
gi|111220042|ref|YP_710836.1| hypothetical protein FRAAL0552 [Fr... 68.9 3e-10
gi|108802491|ref|YP_642687.1| hypothetical protein Mmcs_5531 [My... 68.6 3e-10
gi|240170730|ref|ZP_04749389.1| hypothetical protein MkanA1_1555... 65.1 4e-09
gi|284044421|ref|YP_003394761.1| hypothetical protein Cwoe_2967 ... 64.3 5e-09
gi|284029011|ref|YP_003378942.1| hypothetical protein Kfla_1038 ... 59.3 2e-07
gi|31794589|ref|NP_857082.1| hypothetical protein Mb3442 [Mycoba... 57.4 6e-07
gi|256372388|ref|YP_003110212.1| PilT protein domain-containing ... 56.6 1e-06
gi|15610544|ref|NP_217925.1| hypothetical protein Rv3408 [Mycoba... 55.5 3e-06
gi|325067177|ref|ZP_08125850.1| PilT protein domain-containing p... 53.5 9e-06
gi|15843003|ref|NP_338040.1| hypothetical protein MT3516 [Mycoba... 52.4 2e-05
gi|314971342|gb|EFT15440.1| toxin-antitoxin system, toxin compon... 50.8 7e-05
gi|336115824|ref|YP_004570590.1| hypothetical protein MLP_01730 ... 50.4 9e-05
gi|78224268|ref|YP_386015.1| hypothetical protein Gmet_3076 [Geo... 49.3 2e-04
gi|326771646|ref|ZP_08230931.1| toxin-antitoxin system, toxin co... 48.9 2e-04
gi|340358514|ref|ZP_08681031.1| PilT domain protein [Actinomyces... 47.8 5e-04
gi|307701081|ref|ZP_07638106.1| toxin-antitoxin system, toxin co... 47.4 8e-04
gi|306818894|ref|ZP_07452615.1| conserved hypothetical protein [... 47.0 8e-04
gi|269977174|ref|ZP_06184147.1| toxin-antitoxin system, toxin co... 45.4 0.003
gi|227875583|ref|ZP_03993723.1| hypothetical protein HMPREF0577_... 45.4 0.003
gi|284045881|ref|YP_003396221.1| hypothetical protein Cwoe_4432 ... 44.3 0.007
gi|328953359|ref|YP_004370693.1| hypothetical protein Desac_1665... 42.4 0.026
gi|308274638|emb|CBX31237.1| hypothetical protein N47_E47490 [un... 42.0 0.028
gi|336177878|ref|YP_004583253.1| hypothetical protein FsymDg_189... 41.6 0.041
gi|343524031|ref|ZP_08760991.1| putative toxin-antitoxin system,... 40.8 0.073
>gi|15609099|ref|NP_216478.1| hypothetical protein Rv1962c [Mycobacterium tuberculosis H37Rv]
gi|15841433|ref|NP_336470.1| hypothetical protein MT2012 [Mycobacterium tuberculosis CDC1551]
gi|31793154|ref|NP_855647.1| hypothetical protein Mb1997c [Mycobacterium bovis AF2122/97]
81 more sequence titles
Length=135
Score = 257 bits (657), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 134/135 (99%), Positives = 135/135 (100%), Gaps = 0/135 (0%)
Query 1 VIYLETSALVKLIRIEVESDALADWLDDRTELRWITSALTEVELSRAIRAVSPEGLPAVP 60
+IYLETSALVKLIRIEVESDALADWLDDRTELRWITSALTEVELSRAIRAVSPEGLPAVP
Sbjct 1 MIYLETSALVKLIRIEVESDALADWLDDRTELRWITSALTEVELSRAIRAVSPEGLPAVP 60
Query 61 SVLARLDRFEIDAVIRSTAAAYPNPALRSLDAIHLATAQTAGSVAPLTALVTYDNRLKEA 120
SVLARLDRFEIDAVIRSTAAAYPNPALRSLDAIHLATAQTAGSVAPLTALVTYDNRLKEA
Sbjct 61 SVLARLDRFEIDAVIRSTAAAYPNPALRSLDAIHLATAQTAGSVAPLTALVTYDNRLKEA 120
Query 121 AEALSLAVVAPGQAR 135
AEALSLAVVAPGQAR
Sbjct 121 AEALSLAVVAPGQAR 135
>gi|296169436|ref|ZP_06851057.1| PIN family toxin-antitoxin system [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295895905|gb|EFG75599.1| PIN family toxin-antitoxin system [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=135
Score = 207 bits (527), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 106/133 (80%), Positives = 118/133 (89%), Gaps = 0/133 (0%)
Query 1 VIYLETSALVKLIRIEVESDALADWLDDRTELRWITSALTEVELSRAIRAVSPEGLPAVP 60
+IYL+TSALVKLIRIEVESDALADWLD+RTE RWITSAL EVEL RAIRAV+P GL AVP
Sbjct 1 MIYLDTSALVKLIRIEVESDALADWLDERTETRWITSALAEVELPRAIRAVAPNGLSAVP 60
Query 61 SVLARLDRFEIDAVIRSTAAAYPNPALRSLDAIHLATAQTAGSVAPLTALVTYDNRLKEA 120
SVLARLDRFEID VIR+TAAAYP+PALRSLDAIHLATAQ A S APLTA+V YD+RL +A
Sbjct 61 SVLARLDRFEIDQVIRATAAAYPDPALRSLDAIHLATAQIAASTAPLTAMVAYDSRLSDA 120
Query 121 AEALSLAVVAPGQ 133
A AL + +V PG+
Sbjct 121 ARALGITIVTPGR 133
>gi|336178644|ref|YP_004584019.1| PilT protein domain-containing protein [Frankia symbiont of Datisca
glomerata]
gi|334859624|gb|AEH10098.1| PilT protein domain protein [Frankia symbiont of Datisca glomerata]
Length=138
Score = 137 bits (345), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 79/135 (59%), Positives = 93/135 (69%), Gaps = 1/135 (0%)
Query 1 VIYLETSALVKLIRIEVESDALADWLDDRTELRWITSALTEVELSRAIRAVSPEGLPAVP 60
+IYL+TSA+VKLIR E+ESD L DWL+ + R ITS L EVEL RA+R P L AV
Sbjct 1 MIYLDTSAIVKLIRPELESDKLVDWLNAQQNERVITSKLAEVELPRALRREEPARLAAVA 60
Query 61 SVLARLDRFEIDAVIRSTAAAYPNPALRSLDAIHLATA-QTAGSVAPLTALVTYDNRLKE 119
VLA LDR +ID +R+TA AYP P LRSLDAIHLATA Q S ++A VTYD RL
Sbjct 61 GVLAHLDRLDIDDAVRATAGAYPFPHLRSLDAIHLATADQLVASGKTVSAFVTYDRRLAV 120
Query 120 AAEALSLAVVAPGQA 134
A L LAV APG++
Sbjct 121 TAGELGLAVAAPGRS 135
>gi|300790923|ref|YP_003771214.1| hypothetical protein AMED_9123 [Amycolatopsis mediterranei U32]
gi|299800437|gb|ADJ50812.1| conserved hypothetical protein [Amycolatopsis mediterranei U32]
gi|340532619|gb|AEK47824.1| hypothetical protein RAM_46795 [Amycolatopsis mediterranei S699]
Length=138
Score = 133 bits (335), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 77/134 (58%), Positives = 93/134 (70%), Gaps = 1/134 (0%)
Query 1 VIYLETSALVKLIRIEVESDALADWLDDRTELRWITSALTEVELSRAIRAVSPEGLPAVP 60
+IYL+T+ALVKLIR E ES AL DWLD+R +TS L EVE+SRA+ P L VP
Sbjct 1 MIYLDTAALVKLIRHEAESAALVDWLDERQGTVLVTSTLAEVEVSRALLRSDPGLLTDVP 60
Query 61 SVLARLDRFEIDAVIRSTAAAYPNPALRSLDAIHLATAQTAGSVAPLTALVTYDNRLKEA 120
+V+AR+ ++EID V+R TAAAYP+P LRSLDAIHLATA LT+ VTYD RL
Sbjct 61 AVMARVAKYEIDDVVRRTAAAYPSPDLRSLDAIHLATAHAVFG-RQLTSFVTYDKRLLAV 119
Query 121 AEALSLAVVAPGQA 134
AEAL L +PG A
Sbjct 120 AEALGLPTDSPGAA 133
>gi|302864894|ref|YP_003833531.1| hypothetical protein Micau_0388 [Micromonospora aurantiaca ATCC
27029]
gi|302567753|gb|ADL43955.1| hypothetical protein Micau_0388 [Micromonospora aurantiaca ATCC
27029]
Length=136
Score = 132 bits (331), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 69/135 (52%), Positives = 94/135 (70%), Gaps = 2/135 (1%)
Query 1 VIYLETSALVKLIRIEVESDALADWLDDRTELRWITSALTEVELSRAIRAVSPEGLPAVP 60
+IYL+++A++K++R E E+ L WL++R ++SAL EVE+ RA+R +P+ L VP
Sbjct 1 MIYLDSAAVIKMLRREAETADLLGWLNERAGTALVSSALAEVEVPRALRRAAPQALVGVP 60
Query 61 SVLARLDRFEIDAVIRSTAAAYPNPALRSLDAIHLATAQTAG--SVAPLTALVTYDNRLK 118
SVL RL R EIDA +R+TA AYP P LRSLDA+HLATA+ + A A VTYD RL
Sbjct 61 SVLGRLYRVEIDATVRATAGAYPEPMLRSLDAVHLATAEILARQAAAEFVAFVTYDKRLL 120
Query 119 EAAEALSLAVVAPGQ 133
EAA+A+ L V +PG
Sbjct 121 EAAKAIGLPVASPGM 135
>gi|315501180|ref|YP_004080067.1| hypothetical protein ML5_0364 [Micromonospora sp. L5]
gi|315407799|gb|ADU05916.1| hypothetical protein ML5_0364 [Micromonospora sp. L5]
Length=136
Score = 131 bits (330), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 69/135 (52%), Positives = 94/135 (70%), Gaps = 2/135 (1%)
Query 1 VIYLETSALVKLIRIEVESDALADWLDDRTELRWITSALTEVELSRAIRAVSPEGLPAVP 60
+IYL+++A++K++R E E+ L WL++R ++SAL EVE+ RA+R +P+ L VP
Sbjct 1 MIYLDSAAVIKMLRREAETADLLGWLNERAGTALVSSALVEVEVPRALRRAAPQALVGVP 60
Query 61 SVLARLDRFEIDAVIRSTAAAYPNPALRSLDAIHLATAQTAG--SVAPLTALVTYDNRLK 118
SVL RL R EIDA +R+TA AYP P LRSLDA+HLATA+ + A A VTYD RL
Sbjct 61 SVLGRLYRVEIDATVRATAGAYPEPMLRSLDAVHLATAEILARQAAAEFVAFVTYDERLL 120
Query 119 EAAEALSLAVVAPGQ 133
EAA+A+ L V +PG
Sbjct 121 EAAKAIGLPVASPGM 135
>gi|284029018|ref|YP_003378949.1| hypothetical protein Kfla_1046 [Kribbella flavida DSM 17836]
gi|283808311|gb|ADB30150.1| conserved hypothetical protein [Kribbella flavida DSM 17836]
Length=131
Score = 130 bits (327), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 75/131 (58%), Positives = 92/131 (71%), Gaps = 1/131 (0%)
Query 1 VIYLETSALVKLIRIEVESDALADWLDDRTELRWITSALTEVELSRAIRAVSPEGLPAVP 60
+IYL T+ALVKL+R EV SDAL DWL+DR +L ++SAL E+EL RA+R P L AVP
Sbjct 1 MIYLATAALVKLVRREVPSDALTDWLNDRMDLPLVSSALAEIELPRALRRTEPALLAAVP 60
Query 61 SVLARLDRFEIDAVIRSTAAAYPNPALRSLDAIHLATAQTAGSVAPLTALVTYDNRLKEA 120
+VL+RL +EID +R+TAAAY +P +R LDAIHLATA A LTA VTYD RL +
Sbjct 61 AVLSRLAVYEIDEQVRATAAAYADPLIRPLDAIHLATAH-AVLADDLTAFVTYDRRLLAS 119
Query 121 AEALSLAVVAP 131
AE L L P
Sbjct 120 AETLGLPTACP 130
>gi|288917440|ref|ZP_06411806.1| hypothetical protein FrEUN1fDRAFT_1501 [Frankia sp. EUN1f]
gi|288351143|gb|EFC85354.1| hypothetical protein FrEUN1fDRAFT_1501 [Frankia sp. EUN1f]
Length=141
Score = 112 bits (281), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/123 (55%), Positives = 84/123 (69%), Gaps = 2/123 (1%)
Query 1 VIYLETSALVKLIRIEVESDALADWLDDRTELRWITSALTEVELSRAIRAVSPEGLPAVP 60
+IYL+++A+VKL+ E ES AL DWL+ R +L TSAL EVE++RAIR +PE VP
Sbjct 1 MIYLDSAAVVKLVVAEPESAALVDWLNARDDLPRFTSALAEVEVARAIRRAAPEASGRVP 60
Query 61 SVLARLDRFEIDAVIRSTAAAYPNPALRSLDAIHLATA--QTAGSVAPLTALVTYDNRLK 118
VL R+ R EID +R+ AAA+ +P LRSLDAIHLATA + L A VTYD RL
Sbjct 61 RVLDRMYRLEIDGRVRNVAAAFDDPLLRSLDAIHLATALRLVDANDTQLEAFVTYDKRLL 120
Query 119 EAA 121
EAA
Sbjct 121 EAA 123
>gi|336178692|ref|YP_004584067.1| hypothetical protein FsymDg_2810 [Frankia symbiont of Datisca
glomerata]
gi|334859672|gb|AEH10146.1| hypothetical protein FsymDg_2810 [Frankia symbiont of Datisca
glomerata]
Length=135
Score = 109 bits (272), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/134 (49%), Positives = 85/134 (64%), Gaps = 2/134 (1%)
Query 1 VIYLETSALVKLIRIEVESDALADWLDDRTELRWITSALTEVELSRAIRAVSPEGLPAVP 60
+IYL+++A++KL+R E + L DWLD L ++S L EVE SRA+R +P+ L +P
Sbjct 1 MIYLDSAAVIKLVRAEPFTVDLLDWLDAHRALPLVSSVLVEVEASRALRRCAPQALGRLP 60
Query 61 SVLARLDRFEIDAVIRSTAAAYPNPALRSLDAIHLATAQ--TAGSVAPLTALVTYDNRLK 118
LARL R EI+A +R+ AAAY +P LRSLDA+HLATA T A L A VTYD RL
Sbjct 61 VTLARLYRLEINATVRAVAAAYDDPQLRSLDAVHLATATVLTDQPGARLEAFVTYDKRLL 120
Query 119 EAAEALSLAVVAPG 132
A L +PG
Sbjct 121 AIAARAGLPTASPG 134
>gi|336178809|ref|YP_004584184.1| PilT protein domain-containing protein [Frankia symbiont of Datisca
glomerata]
gi|334859789|gb|AEH10263.1| PilT protein domain protein [Frankia symbiont of Datisca glomerata]
Length=129
Score = 87.4 bits (215), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 59/130 (46%), Positives = 82/130 (64%), Gaps = 5/130 (3%)
Query 1 VIYLETSALVKLIRIEVESDALADWLDDRTELRWITSALTEVELSRAIRAVSPEGLPAVP 60
+IYL++SALVKL+ E+E+ AL WL R + ++SAL +E++RA+R P LP VP
Sbjct 1 MIYLDSSALVKLVHPELETRALRSWLATRPGVS-VSSALAVLEVTRALRRSDPAALPRVP 59
Query 61 SVLARLDRFEIDAVIRSTAAAYPNPALRSLDAIHLATAQTAGSVAPLTALVTYDNRLKEA 120
VL+R+ +D + AAA +P LRSLDA+HLATA + P V+YD RL A
Sbjct 60 DVLSRVMLVPVDQPVIVAAAALTDPLLRSLDALHLATALRLDT--PSLVFVSYDKRLSAA 117
Query 121 A--EALSLAV 128
A E L++AV
Sbjct 118 AVQERLNVAV 127
>gi|284989378|ref|YP_003407932.1| PilT protein domain-containing protein [Geodermatophilus obscurus
DSM 43160]
gi|284062623|gb|ADB73561.1| PilT protein domain protein [Geodermatophilus obscurus DSM 43160]
Length=130
Score = 85.5 bits (210), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/131 (46%), Positives = 76/131 (59%), Gaps = 2/131 (1%)
Query 1 VIYLETSALVKLIRIEVESDALADWLDDRTELRWITSALTEVELSRAIRAVSPEGLPAVP 60
+I +++SALVKL+ E ES AL WL R L S L VEL RA+ +P G+P
Sbjct 1 MIAIDSSALVKLVLDEPESAALEGWLTSRAPLSVAASDLVRVELIRAVARAAPAGVPRAR 60
Query 61 SVLARLDRFEIDAVIRSTAAAYPNPALRSLDAIHLATAQTAGSVAPLTALVTYDNRLKEA 120
++L +D + + TAA P+LRSLDA+HLATA + GS L A V YD RL +A
Sbjct 61 TLLTGVDLVPVTRDLLETAADLGPPSLRSLDALHLATALSLGSA--LDAFVVYDERLAQA 118
Query 121 AEALSLAVVAP 131
A L VVAP
Sbjct 119 ATDAGLPVVAP 129
>gi|86741564|ref|YP_481964.1| PilT protein-like protein [Frankia sp. CcI3]
gi|86568426|gb|ABD12235.1| PilT protein-like [Frankia sp. CcI3]
Length=129
Score = 84.0 bits (206), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 57/130 (44%), Positives = 75/130 (58%), Gaps = 3/130 (2%)
Query 3 YLETSALVKLIRIEVESDALADWLDDRTELRWITSALTEVELSRAIRAVSPEGLPAVPSV 62
YL++SAL+KL E + AL WL R + ++SAL +E++RA+R P LP +P V
Sbjct 3 YLDSSALMKLTHPERGTRALRSWLAVRPGV-AVSSALVMLEVTRALRRSDPAALPRIPDV 61
Query 63 LARLDRFEIDAVIRSTAAAYPNPALRSLDAIHLATAQTAGSVAPLTALVTYDNRLKEAAE 122
L+R+ ID I +AAA +P LRSLDA+HLATA AP V+YD RL AA
Sbjct 62 LSRITLVPIDQPIMVSAAALTDPLLRSLDALHLATALRLD--APSLVFVSYDKRLSTAAA 119
Query 123 ALSLAVVAPG 132
L V P
Sbjct 120 QEGLTVAVPA 129
>gi|296169352|ref|ZP_06850977.1| PIN family toxin-antitoxin system [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295895974|gb|EFG75664.1| PIN family toxin-antitoxin system [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=130
Score = 82.0 bits (201), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/130 (47%), Positives = 76/130 (59%), Gaps = 4/130 (3%)
Query 2 IYLETSALVKLIRIEVESDALADWLDDRTELRWITSALTEVELSRAIRAVSPEGLPAVPS 61
IYL++SA+VKL E ESDAL +L RT L ++SAL E+ RA+ A
Sbjct 4 IYLDSSAIVKLAVREPESDALRRYL--RTRLPRVSSALARTEVMRALLHKGESARRAGRR 61
Query 62 VLARLDRFEIDAVIRSTAAAYPNPALRSLDAIHLATAQTAGSVAPLTALVTYDNRLKEAA 121
LA LD ID + A LR+LDAIHLATAQ G L L TYD+R+++AA
Sbjct 62 ALASLDLLRIDNRLLDLAGGLLPIELRTLDAIHLATAQRLG--MDLGRLCTYDDRMRDAA 119
Query 122 EALSLAVVAP 131
EAL +AV+AP
Sbjct 120 EALGMAVIAP 129
>gi|15610520|ref|NP_217901.1| hypothetical protein Rv3384c [Mycobacterium tuberculosis H37Rv]
gi|31794564|ref|NP_857057.1| hypothetical protein Mb3416c [Mycobacterium bovis AF2122/97]
gi|121639308|ref|YP_979532.1| hypothetical protein BCG_3453c [Mycobacterium bovis BCG str.
Pasteur 1173P2]
56 more sequence titles
Length=130
Score = 81.6 bits (200), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/130 (44%), Positives = 74/130 (57%), Gaps = 4/130 (3%)
Query 2 IYLETSALVKLIRIEVESDALADWLDDRTELRWITSALTEVELSRAIRAVSPEGLPAVPS 61
IYL++SA+VKL E ESDAL +L RT ++SAL E+ RA+ A
Sbjct 4 IYLDSSAIVKLAVREPESDALRRYL--RTRHPRVSSALARAEVMRALLDKGESARKAGRR 61
Query 62 VLARLDRFEIDAVIRSTAAAYPNPALRSLDAIHLATAQTAGSVAPLTALVTYDNRLKEAA 121
LA LD +D + A LR+LDAIHLATAQ G L L TYD+R+++AA
Sbjct 62 ALAHLDLLRVDKRVLDLAGGLLPFELRTLDAIHLATAQRLG--VDLGRLCTYDDRMRDAA 119
Query 122 EALSLAVVAP 131
+ L +AV+AP
Sbjct 120 KTLGMAVIAP 129
>gi|15842977|ref|NP_338014.1| hypothetical protein MT3492 [Mycobacterium tuberculosis CDC1551]
gi|308232444|ref|ZP_07664085.1| toxin [Mycobacterium tuberculosis SUMu001]
gi|308370247|ref|ZP_07666899.1| toxin [Mycobacterium tuberculosis SUMu002]
19 more sequence titles
Length=131
Score = 81.6 bits (200), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/130 (44%), Positives = 74/130 (57%), Gaps = 4/130 (3%)
Query 2 IYLETSALVKLIRIEVESDALADWLDDRTELRWITSALTEVELSRAIRAVSPEGLPAVPS 61
IYL++SA+VKL E ESDAL +L RT ++SAL E+ RA+ A
Sbjct 5 IYLDSSAIVKLAVREPESDALRRYL--RTRHPRVSSALARAEVMRALLDKGESARKAGRR 62
Query 62 VLARLDRFEIDAVIRSTAAAYPNPALRSLDAIHLATAQTAGSVAPLTALVTYDNRLKEAA 121
LA LD +D + A LR+LDAIHLATAQ G L L TYD+R+++AA
Sbjct 63 ALAHLDLLRVDKRVLDLAGGLLPFELRTLDAIHLATAQRLG--VDLGRLCTYDDRMRDAA 120
Query 122 EALSLAVVAP 131
+ L +AV+AP
Sbjct 121 KTLGMAVIAP 130
>gi|340628364|ref|YP_004746816.1| hypothetical protein MCAN_34091 [Mycobacterium canettii CIPT
140010059]
gi|340006554|emb|CCC45740.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059]
Length=127
Score = 77.8 bits (190), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/130 (46%), Positives = 77/130 (60%), Gaps = 4/130 (3%)
Query 2 IYLETSALVKLIRIEVESDALADWLDDRTELRWITSALTEVELSRAIRAVSPEGLPAVPS 61
+YL++SA+VKL E ESDAL +L RT ++SAL E+ RA+ A
Sbjct 1 MYLDSSAIVKLAVREPESDALRRYL--RTRRPRVSSALARAEVMRALLRQGESARKAGRR 58
Query 62 VLARLDRFEIDAVIRSTAAAYPNPALRSLDAIHLATAQTAGSVAPLTALVTYDNRLKEAA 121
VLA LD ID + A A LR+LDAIHLATAQ G L L TYD+R+++AA
Sbjct 59 VLASLDLLRIDTRVLDLAGALLPFELRTLDAIHLATAQRLG--VDLGRLCTYDDRMRDAA 116
Query 122 EALSLAVVAP 131
+AL +AV+AP
Sbjct 117 DALGMAVIAP 126
>gi|307700859|ref|ZP_07637884.1| toxin-antitoxin system, toxin component, PIN family [Mobiluncus
mulieris FB024-16]
gi|307613854|gb|EFN93098.1| toxin-antitoxin system, toxin component, PIN family [Mobiluncus
mulieris FB024-16]
Length=133
Score = 77.8 bits (190), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/132 (43%), Positives = 71/132 (54%), Gaps = 3/132 (2%)
Query 1 VIYLETSALVKLIRIEVESDALADWLDDRTELRWITSALTEVELSRAIRAVSPEGLPAVP 60
V YL+TSALVK + E ES+A A W+ + TS T VEL R +
Sbjct 2 VFYLDTSALVKALHQEAESEAFAQWMAANAQ-HCYTSDFTRVELLRVTGRLGAATRVQAR 60
Query 61 SVLARLDRFEIDAVIRSTAAAYPNPALRSLDAIHLATAQTAGSVAPLTALVTYDNRLKEA 120
+VL L+ I I TA LRSLDAIHLATA G L ALVTYD RL +A
Sbjct 61 AVLDALNLVAISPAICDTAGLLEPATLRSLDAIHLATALQLGD--DLEALVTYDLRLGQA 118
Query 121 AEALSLAVVAPG 132
A+ L++ +++PG
Sbjct 119 AQMLAIPLLSPG 130
>gi|336179976|ref|YP_004585351.1| PilT protein domain-containing protein [Frankia symbiont of Datisca
glomerata]
gi|334860956|gb|AEH11430.1| PilT protein domain protein [Frankia symbiont of Datisca glomerata]
Length=138
Score = 77.8 bits (190), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/136 (42%), Positives = 74/136 (55%), Gaps = 4/136 (2%)
Query 2 IYLETSALVKLIRIEVESDALADWLDDRTE-LRWITSALTEVELSRAIRAVSPEGL-PAV 59
+YL+TSAL KL E E+ L W D+ E LR ++S L VEL+R + V+P L PA
Sbjct 5 VYLDTSALAKLFIAEKETPDLRQWFADQVEPLRLVSSTLLAVELTRLLNLVNPTMLGPAE 64
Query 60 PSVLARLDRFEIDAVIRSTAAAYPNPALRSLDAIHLATAQTAGSVAPLTALVTYDNRLKE 119
+ A +D EI + AA P P LR+LDAIHLATA L +++YD L E
Sbjct 65 SFLSADVDLVEITPPLLGDAARVPPPRLRTLDAIHLATALDLRDS--LDVVLSYDKLLVE 122
Query 120 AAEALSLAVVAPGQAR 135
A A L +PG R
Sbjct 123 AVHASGLPAASPGAGR 138
>gi|269978026|ref|ZP_06184976.1| toxin-antitoxin system, toxin component, PIN family [Mobiluncus
mulieris 28-1]
gi|269933535|gb|EEZ90119.1| toxin-antitoxin system, toxin component, PIN family [Mobiluncus
mulieris 28-1]
Length=133
Score = 77.4 bits (189), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/132 (43%), Positives = 71/132 (54%), Gaps = 3/132 (2%)
Query 1 VIYLETSALVKLIRIEVESDALADWLDDRTELRWITSALTEVELSRAIRAVSPEGLPAVP 60
V YL+TSALVK + E ES+A A W+ + TS T VEL R +
Sbjct 2 VFYLDTSALVKALHQEAESEAFAQWMAANAQ-HCYTSDFTRVELLRVAGRLGAATRVQAR 60
Query 61 SVLARLDRFEIDAVIRSTAAAYPNPALRSLDAIHLATAQTAGSVAPLTALVTYDNRLKEA 120
+VL L+ I I TA LRSLDAIHLATA G L ALVTYD RL +A
Sbjct 61 AVLDALNLVAISPAICDTAGLLEPATLRSLDAIHLATALQLGD--DLEALVTYDLRLGQA 118
Query 121 AEALSLAVVAPG 132
A+ L++ +++PG
Sbjct 119 AQMLAIPLLSPG 130
>gi|336176937|ref|YP_004582312.1| hypothetical protein FsymDg_0881 [Frankia symbiont of Datisca
glomerata]
gi|334857917|gb|AEH08391.1| hypothetical protein FsymDg_0881 [Frankia symbiont of Datisca
glomerata]
Length=132
Score = 76.3 bits (186), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/134 (41%), Positives = 72/134 (54%), Gaps = 5/134 (3%)
Query 1 VIYLETSALVKLIRIEVESDALADWLDDRTELRWITSALTEVELSRAIRAVSPEG---LP 57
+IYL++ ALVKL+ E E+ AL +L +TS L E+ RA+R + +
Sbjct 1 MIYLDSCALVKLVVTEAETSALRAFLSAHAGYPQVTSLLARTEVVRAVRRATADDADLYK 60
Query 58 AVPSVLARLDRFEIDAVIRSTAAAYPNPALRSLDAIHLATAQTAGSVAPLTALVTYDNRL 117
A ++L RLD +D I A A +P +R+LDAIHLA A+ G LTA VTYD RL
Sbjct 61 AAVTMLNRLDHIILDRPILDDAGAVADPLVRTLDAIHLAAARRLGD--SLTAFVTYDRRL 118
Query 118 KEAAEALSLAVVAP 131
AA V AP
Sbjct 119 ATAALDFGFPVRAP 132
>gi|120402717|ref|YP_952546.1| PilT domain-containing protein [Mycobacterium vanbaalenii PYR-1]
gi|119955535|gb|ABM12540.1| PilT protein domain protein [Mycobacterium vanbaalenii PYR-1]
Length=134
Score = 76.3 bits (186), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/133 (44%), Positives = 76/133 (58%), Gaps = 3/133 (2%)
Query 1 VIYLETSALVKLIRIEVESDALADWLDDR-TELRWITSALTEVELSRAIRAVSPEGLPAV 59
+IYL+TSA+VKL+ E ES+ L DWL++R T +TS + VEL RA E + A
Sbjct 1 MIYLDTSAMVKLVVAEPESEELIDWLNERLTHDPIVTSIIGRVELHRAALRAGAEAMAAA 60
Query 60 PSVLARLDRFEIDAVIRSTAAAYPNPALRSLDAIHLATAQTAGSVAPLTALVTYDNRLKE 119
VL +D + I + A LR+LDA+HLATA+ LTA+ YD RL +
Sbjct 61 REVLDGVDTLVLTEPIAALAGTMVPAELRTLDALHLATAEIHRE--GLTAICAYDRRLVD 118
Query 120 AAEALSLAVVAPG 132
AA A L VVAPG
Sbjct 119 AARARKLPVVAPG 131
>gi|334337553|ref|YP_004542705.1| PilT protein domain protein [Isoptericola variabilis 225]
gi|334107921|gb|AEG44811.1| PilT protein domain protein [Isoptericola variabilis 225]
Length=149
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/131 (43%), Positives = 73/131 (56%), Gaps = 3/131 (2%)
Query 3 YLETSALVKLIRIEVESDALADWLDDRTELRWITSALTEVELSRAIRAVSPEGLPAVPSV 62
YL+TSALVKL+ E ES AL W+D + R ++S L EL RA+R +PE +V
Sbjct 3 YLDTSALVKLVVREPESAALKKWVDANDD-RLVSSDLARTELLRAVRRAAPEHAVTARAV 61
Query 63 LARLDRFEIDAVIRSTAAAYPNPALRSLDAIHLATAQTAGSVAPLTALVTYDNRLKEAAE 122
L +D + AA +RSLDA+HLATA G L ++VTYD RL +AA
Sbjct 62 LDAVDLLALTTADFEAAAHLDPDIVRSLDALHLATALRLGD--ELESMVTYDVRLADAAR 119
Query 123 ALSLAVVAPGQ 133
+AV APG
Sbjct 120 YHGVAVTAPGS 130
>gi|296166224|ref|ZP_06848663.1| PIN family toxin-antitoxin system [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295898408|gb|EFG77975.1| PIN family toxin-antitoxin system [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=131
Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/132 (47%), Positives = 75/132 (57%), Gaps = 8/132 (6%)
Query 3 YLETSALVKLIRIEVESDALADWLDDRTELRWITSALTEVELSRAIRAVSPEGLPAVPSV 62
YL+TSALVKL+ E ES AL ++L T+AL EL IRAVS G AV
Sbjct 4 YLDTSALVKLVVAEDESTALQEYLRAVAADTLFTAALARTEL---IRAVSGAGAGAVSQA 60
Query 63 LARLDRFEIDAVIRS--TAAAYPNPA-LRSLDAIHLATAQTAGSVAPLTALVTYDNRLKE 119
LD+ + + R AAA PA LR+LDAIHLA AQ AG+ L A+VTYD R+
Sbjct 61 RRILDQLDTINLTRGLLDAAADLRPARLRTLDAIHLAAAQRAGT--DLRAVVTYDTRMAA 118
Query 120 AAEALSLAVVAP 131
AA L + + AP
Sbjct 119 AAADLGIVIEAP 130
>gi|182435669|ref|YP_001823388.1| hypothetical protein SGR_1876 [Streptomyces griseus subsp. griseus
NBRC 13350]
gi|178464185|dbj|BAG18705.1| hypothetical protein [Streptomyces griseus subsp. griseus NBRC
13350]
Length=144
Score = 74.7 bits (182), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/145 (38%), Positives = 75/145 (52%), Gaps = 16/145 (11%)
Query 1 VIYLETSALVKLIRIEVESDALADWLDDRTELRWITSALTEVELSRAIR--AVSPEG--- 55
+IYL++ ALVKLI+ E ++DAL +L++R + R +TS L E+ R IR P+G
Sbjct 1 MIYLDSCALVKLIKREKDTDALVAFLEERPQQRQVTSDLAVTEIMRVIRRARCGPQGQLL 60
Query 56 ---------LPAVPSVLARLDRFEIDAVIRSTAAAYPNPALRSLDAIHLATAQTAGSVAP 106
L A L D +D + A A ++SLDAIHLA+A G
Sbjct 61 IDDLTFTRLLEAAEKRLNATDLVTLDLALLEEAGALEEFNIKSLDAIHLASALMLGP--S 118
Query 107 LTALVTYDNRLKEAAEALSLAVVAP 131
LT+ VTYD L+ AE L V +P
Sbjct 119 LTSFVTYDGGLRGHAENRGLPVFSP 143
>gi|326382371|ref|ZP_08204063.1| toxin [Gordonia neofelifaecis NRRL B-59395]
gi|326199101|gb|EGD56283.1| toxin [Gordonia neofelifaecis NRRL B-59395]
Length=142
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/137 (42%), Positives = 69/137 (51%), Gaps = 5/137 (3%)
Query 1 VIYLETSALVKLIRIEVESDALADWLDDRTEL--RWITSALTEVELSRAI-RAVSPEGLP 57
+IYL+TSALVKL+ E ES L WLD + ++ L VE+ R + R P L
Sbjct 1 MIYLDTSALVKLLVAEAESADLVSWLDTQVNSGENLVSGDLARVEVMRTVARLDEPGLLD 60
Query 58 AVPSVLARLDRFEIDAVIRSTAAAYPNPALRSLDAIHLATAQTAGSVAPLTALVTYDNRL 117
+L LD + A LRS+DAIHLA A GS LTA V YD RL
Sbjct 61 DARMMLDGLDSIPTSETVVDEATVIGPSTLRSVDAIHLAAASQLGSA--LTAFVAYDVRL 118
Query 118 KEAAEALSLAVVAPGQA 134
+AA L L APGQA
Sbjct 119 HDAAAELGLPASAPGQA 135
>gi|229821860|ref|YP_002883386.1| twitching mobility protein PilT [Beutenbergia cavernae DSM 12333]
gi|229567773|gb|ACQ81624.1| PilT protein domain protein [Beutenbergia cavernae DSM 12333]
Length=131
Score = 70.1 bits (170), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/130 (43%), Positives = 71/130 (55%), Gaps = 4/130 (3%)
Query 3 YLETSALVKLIRIEVESDALADWLDDRTELRWITSALTEVELSRAIRAVSPEGLPAVPSV 62
YL+TSA KLI +E ES ALAD+L + +TS + VEL R + P +
Sbjct 5 YLDTSASAKLIAVEAESAALADYLRASPDAEAVTSVVGIVELLRVGARLGPAQRLRAVDL 64
Query 63 LARLDRFEIDAVIRSTAAAYPNPALRSLDAIHLATAQTAGSVAPLTALVTYDNRLKEAAE 122
ARL + I AA LR+LDAIH+A+A AG+ ++V+YD RL EAA
Sbjct 65 AARLGTIALTESIARAAADAAPANLRTLDAIHVASAVVAGA----ESVVSYDARLSEAAV 120
Query 123 ALSLAVVAPG 132
A L VVAPG
Sbjct 121 AAGLRVVAPG 130
>gi|111220042|ref|YP_710836.1| hypothetical protein FRAAL0552 [Frankia alni ACN14a]
gi|111147574|emb|CAJ59227.1| hypothetical protein; putative PilT domain [Frankia alni ACN14a]
Length=138
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/133 (40%), Positives = 75/133 (57%), Gaps = 4/133 (3%)
Query 2 IYLETSALVKLIRIEVESDALADWLDDRTE-LRWITSALTEVELSRAIRAVSPEGLPAVP 60
IYL+TSAL K+ E ESD L WL ++ + LR ++SAL VEL+R + ++P L
Sbjct 5 IYLDTSALAKMFIAEKESDDLRQWLVEQVQPLRLVSSALLAVELTRLLGLINPAILGLAE 64
Query 61 SVLAR-LDRFEIDAVIRSTAAAYPNPALRSLDAIHLATAQTAGSVAPLTALVTYDNRLKE 119
S L+ +D +I + + A+ P LR+LDAIHLATA L +++YD L E
Sbjct 65 SFLSSDVDLVQITPPLLADASRVPPARLRTLDAIHLATALDLRD--SLDIVLSYDKLLIE 122
Query 120 AAEALSLAVVAPG 132
A A L +PG
Sbjct 123 AVSASGLVPASPG 135
>gi|108802491|ref|YP_642687.1| hypothetical protein Mmcs_5531 [Mycobacterium sp. MCS]
gi|119855319|ref|YP_935922.1| hypothetical protein Mkms_5933 [Mycobacterium sp. KMS]
gi|108772910|gb|ABG11631.1| conserved hypothetical protein [Mycobacterium sp. MCS]
gi|119698036|gb|ABL95107.1| conserved hypothetical protein [Mycobacterium sp. KMS]
Length=133
Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/133 (38%), Positives = 73/133 (55%), Gaps = 4/133 (3%)
Query 1 VIYLETSALVKLIRIEVESDALADWLDDRTELRWITSALTEVELSRAIRAVSPEGLPAVP 60
+IYL+ +A++KLI ES AL +L T+ RW T AL+ +++ RA A+ E
Sbjct 1 MIYLDATAIMKLIAQAPESAALTTYLRAHTDTRWFTCALSRLDVVRATAALPAEATEHAH 60
Query 61 SVLARLDRFEI-DAVIRSTAAAYPNPALRSLDAIHLATAQTAGSVAPLTALVTYDNRLKE 119
+LA LD + D ++ + A P PA R+ DA+H+A A +AG L L+TYD L
Sbjct 61 RILAGLDTVAVTDRLLDAAVALTPAPA-RTTDALHIAAALSAGPR--LRTLITYDPDLSR 117
Query 120 AAEALSLAVVAPG 132
AA + V PG
Sbjct 118 AAADHHINTVHPG 130
>gi|240170730|ref|ZP_04749389.1| hypothetical protein MkanA1_15552 [Mycobacterium kansasii ATCC
12478]
Length=136
Score = 65.1 bits (157), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/138 (39%), Positives = 69/138 (50%), Gaps = 5/138 (3%)
Query 1 VIYLETSALVKLIRIEVESDALADWLDDRTELRWI--TSALTEVELSRAIRAVSPEGLPA 58
+IYL+TSAL KL+ E E+D L +WL T+ TSAL+ VEL R + G
Sbjct 1 MIYLDTSALTKLLIAEPETDELRNWLTVHTDQGEFAATSALSRVELMRVVARQGESGQAE 60
Query 59 -VPSVLARLDRFEIDAVIRSTAAAYPNPALRSLDAIHLATAQTAGSVAPLTALVTYDNRL 117
+L LD + A + + A LR+LDAIHLA A LTA VTYD+RL
Sbjct 61 RARYLLDGLDILPLTAPVINLAETIGPATLRTLDAIHLAAATQIKR--ELTAFVTYDHRL 118
Query 118 KEAAEALSLAVVAPGQAR 135
+ L +PG R
Sbjct 119 LAGCLEVGLVTASPGAVR 136
>gi|284044421|ref|YP_003394761.1| hypothetical protein Cwoe_2967 [Conexibacter woesei DSM 14684]
gi|283948642|gb|ADB51386.1| conserved hypothetical protein [Conexibacter woesei DSM 14684]
Length=133
Score = 64.3 bits (155), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/131 (41%), Positives = 66/131 (51%), Gaps = 4/131 (3%)
Query 1 VIYLETSALVKLIRIEVESDALADWLDDRTELRWITSALTEVELSRAIRAVSPEGLPAVP 60
V YL++SALVKL+ E ES L L R+ ++ AL VE+ RA+ A PE
Sbjct 6 VCYLDSSALVKLVVREPESATLTRHL--RSRPVRVSCALATVEVVRAVGAHGPEATDRAR 63
Query 61 SVLARLDRFEIDAVIRSTAAAYPNPALRSLDAIHLATAQTAGSVAPLTALVTYDNRLKEA 120
VL +D +D + AA P LRSLDAIHLA A L+TYD R+
Sbjct 64 QVLDGVDMIRLDDPLLHAAATLDGPLLRSLDAIHLAAALALREDE--VELITYDRRMAAH 121
Query 121 AEALSLAVVAP 131
AE L V AP
Sbjct 122 AEQLGFVVSAP 132
>gi|284029011|ref|YP_003378942.1| hypothetical protein Kfla_1038 [Kribbella flavida DSM 17836]
gi|283808304|gb|ADB30143.1| hypothetical protein Kfla_1038 [Kribbella flavida DSM 17836]
Length=134
Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/137 (38%), Positives = 72/137 (53%), Gaps = 10/137 (7%)
Query 1 VIYLETSALVKLIRIEVESDALADW---LDDRTELRWITSALTEVELSRAI--RAVSPEG 55
+IYL+ AL+K I+ E ES AL W L TEL +TS L ++E++R + V +
Sbjct 1 MIYLDACALLKFIKPEKESAALRKWREALPPDTEL--LTSELAKLEITRTLLRAGVDHQQ 58
Query 56 LPAVPSVLAR-LDRFEIDAVIRSTAAAYPNPALRSLDAIHLATAQTAGSVAPLTALVTYD 114
+P R + ++ + + + A AY L SLDAIHLA+A+ A L VTYD
Sbjct 59 VPYFTGQAVRGIYVVDLSSTVLARAMAYRTARLGSLDAIHLASAEP--FRADLEQFVTYD 116
Query 115 NRLKEAAEALSLAVVAP 131
L AA L V+AP
Sbjct 117 KELSGAAAELGFPVLAP 133
>gi|31794589|ref|NP_857082.1| hypothetical protein Mb3442 [Mycobacterium bovis AF2122/97]
gi|121639333|ref|YP_979557.1| hypothetical protein BCG_3478 [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|148824615|ref|YP_001289369.1| hypothetical protein TBFG_13442 [Mycobacterium tuberculosis F11]
67 more sequence titles
Length=136
Score = 57.4 bits (137), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/138 (37%), Positives = 64/138 (47%), Gaps = 5/138 (3%)
Query 1 VIYLETSALVKLIRIEVESDALADWLDDRTELRW--ITSALTEVELSRAI-RAVSPEGLP 57
+IY++TSAL KL+ E E+ L WL ++ TS L VEL R + R P
Sbjct 1 MIYMDTSALTKLLISEPETTELRTWLTAQSGQGEDAATSTLGRVELMRVVARYGQPGQTE 60
Query 58 AVPSVLARLDRFEIDAVIRSTAAAYPNPALRSLDAIHLATAQTAGSVAPLTALVTYDNRL 117
+L LD + + A LRSLDAIHLA A A LTA VTYD+RL
Sbjct 61 RARYLLDGLDILPLTEPVIGLAETIGPATLRSLDAIHLAAA--AQIKRELTAFVTYDHRL 118
Query 118 KEAAEALSLAVVAPGQAR 135
+ +PG R
Sbjct 119 LSGCREVGFVTASPGAVR 136
>gi|256372388|ref|YP_003110212.1| PilT protein domain-containing protein [Acidimicrobium ferrooxidans
DSM 10331]
gi|256008972|gb|ACU54539.1| PilT protein domain protein [Acidimicrobium ferrooxidans DSM
10331]
Length=130
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/131 (41%), Positives = 68/131 (52%), Gaps = 3/131 (2%)
Query 1 VIYLETSALVKLIRIEVESDALADWLDDRTELRWITSALTEVELSRAIRAVSPEGLPAVP 60
V YL+TSA KL+ E S+A+A W E + I S L EL RA R +P+ +
Sbjct 2 VFYLDTSAAAKLVVAEPASEAMASWAASH-ETQVIASDLLRTELLRATRRAAPDRMQRAR 60
Query 61 SVLARLDRFEIDAVIRSTAAAYPNPALRSLDAIHLATAQTAGSVAPLTALVTYDNRLKEA 120
SVL L F + + AA LRSLDA+HLA A G L +VTYDNR+ A
Sbjct 61 SVLDALTLFNLTSATLERAATLDPEELRSLDALHLAAALELGD--ELDGIVTYDNRMAAA 118
Query 121 AEALSLAVVAP 131
A +AV+ P
Sbjct 119 ASQYGVAVIVP 129
>gi|15610544|ref|NP_217925.1| hypothetical protein Rv3408 [Mycobacterium tuberculosis H37Rv]
gi|148663272|ref|YP_001284795.1| hypothetical protein MRA_3448 [Mycobacterium tuberculosis H37Ra]
gi|167968706|ref|ZP_02550983.1| hypothetical protein MtubH3_11975 [Mycobacterium tuberculosis
H37Ra]
gi|307086187|ref|ZP_07495300.1| toxin [Mycobacterium tuberculosis SUMu012]
gi|332278240|sp|Q50717.3|VPC47_MYCTU RecName: Full=Probable ribonuclease VapC47; Short=Probable RNase
VapC47; AltName: Full=Toxin VapC47
gi|1449379|emb|CAB01015.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium tuberculosis H37Rv]
gi|148507424|gb|ABQ75233.1| hypothetical protein MRA_3448 [Mycobacterium tuberculosis H37Ra]
gi|308364354|gb|EFP53205.1| toxin [Mycobacterium tuberculosis SUMu012]
Length=136
Score = 55.5 bits (132), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/141 (36%), Positives = 66/141 (47%), Gaps = 11/141 (7%)
Query 1 VIYLETSALVKLIRIEVESDALADWLDDRTELRW--ITSALTEVELSRAIRAVSPEGLPA 58
+IY++TSAL KL+ E E+ L WL ++ TS L VE ++R V+ G P
Sbjct 1 MIYMDTSALTKLLISEPETTELRTWLTAQSGQGEDAATSTLGRVE---SMRVVARYGQPG 57
Query 59 VPS----VLARLDRFEIDAVIRSTAAAYPNPALRSLDAIHLATAQTAGSVAPLTALVTYD 114
+L LD + + A LRSLDAIHLA A A LTA VTYD
Sbjct 58 QTERARYLLDGLDILPLTEPVIGLAETIGPATLRSLDAIHLAAA--AQIKRELTAFVTYD 115
Query 115 NRLKEAAEALSLAVVAPGQAR 135
+RL + +PG R
Sbjct 116 HRLLSGCREVGFVTASPGAVR 136
>gi|325067177|ref|ZP_08125850.1| PilT protein domain-containing protein [Actinomyces oris K20]
Length=131
Score = 53.5 bits (127), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 52/135 (39%), Positives = 69/135 (52%), Gaps = 11/135 (8%)
Query 1 VIYLETSALVKLIRIEVESDALADWLDDRTE--LRWITSALTEVELSRAIRAVSPEGLPA 58
V YL+TSA +KL+ E ES+ LA WL T +S L EL A R A
Sbjct 3 VYYLDTSAALKLLIEEKESEPLAAWLTSHTTDGDSLCSSFLLHTELHCAARRRGELNQEA 62
Query 59 VPSVLARLDRFEIDAVIRS--TAAAYPNPALRSLDAIHLATAQTAGSVAPLTALVTYDNR 116
V S+L+ +D ++ RS T AA + LR+ DAIHL TA A+VTYD
Sbjct 63 VASLLSGIDLIDVS---RSHLTDAARTSMGLRAADAIHL----TAALDIQADAIVTYDIE 115
Query 117 LKEAAEALSLAVVAP 131
++ AA +L+ VAP
Sbjct 116 MQNAARYCNLSPVAP 130
>gi|15843003|ref|NP_338040.1| hypothetical protein MT3516 [Mycobacterium tuberculosis CDC1551]
gi|308378313|ref|ZP_07668719.1| toxin [Mycobacterium tuberculosis SUMu009]
gi|308380689|ref|ZP_07669253.1| toxin [Mycobacterium tuberculosis SUMu011]
gi|13883344|gb|AAK47854.1| hypothetical protein MT3516 [Mycobacterium tuberculosis CDC1551]
gi|308352931|gb|EFP41782.1| toxin [Mycobacterium tuberculosis SUMu009]
gi|308360743|gb|EFP49594.1| toxin [Mycobacterium tuberculosis SUMu011]
Length=133
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/135 (36%), Positives = 61/135 (46%), Gaps = 5/135 (3%)
Query 4 LETSALVKLIRIEVESDALADWLDDRTELRW--ITSALTEVELSRAI-RAVSPEGLPAVP 60
++TSAL KL+ E E+ L WL ++ TS L VEL R + R P
Sbjct 1 MDTSALTKLLISEPETTELRTWLTAQSGQGEDAATSTLGRVELMRVVARYGQPGQTERAR 60
Query 61 SVLARLDRFEIDAVIRSTAAAYPNPALRSLDAIHLATAQTAGSVAPLTALVTYDNRLKEA 120
+L LD + + A LRSLDAIHLA A A LTA VTYD+RL
Sbjct 61 YLLDGLDILPLTEPVIGLAETIGPATLRSLDAIHLAAA--AQIKRELTAFVTYDHRLLSG 118
Query 121 AEALSLAVVAPGQAR 135
+ +PG R
Sbjct 119 CREVGFVTASPGAVR 133
>gi|314971342|gb|EFT15440.1| toxin-antitoxin system, toxin component, PIN domain protein [Propionibacterium
acnes HL037PA3]
gi|328906281|gb|EGG26056.1| PilT protein domain protein [Propionibacterium humerusii P08]
Length=71
Score = 50.8 bits (120), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/73 (42%), Positives = 42/73 (58%), Gaps = 4/73 (5%)
Query 59 VPSVLARLDRFEIDAVIRSTAAAYPNPALRSLDAIHLATAQTAGSVAPLTALVTYDNRLK 118
+ S+L ++ + I+ + A P LRSLDA+HLATA G + ALVTYD RL+
Sbjct 2 ISSLLTKVSLYLIEPAQLTHAGLLPGQNLRSLDALHLATAIDLG----VDALVTYDQRLQ 57
Query 119 EAAEALSLAVVAP 131
A + + VVAP
Sbjct 58 STAHEIGMPVVAP 70
>gi|336115824|ref|YP_004570590.1| hypothetical protein MLP_01730 [Microlunatus phosphovorus NM-1]
gi|334683602|dbj|BAK33187.1| hypothetical protein MLP_01730 [Microlunatus phosphovorus NM-1]
Length=139
Score = 50.4 bits (119), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 50/132 (38%), Positives = 72/132 (55%), Gaps = 10/132 (7%)
Query 3 YLETS-ALVKLIRIEVESDALADWLDDRTELR--WITSALTEVELSRAIRAVSPEGLPAV 59
YL++S AL L+ VE+ A+W D+R + +S L E+EL+R R S + + V
Sbjct 13 YLDSSVALRVLLAHSVEA---AEWFDERAFAGDAFASSRLLELELTRVFRRESLD-VVEV 68
Query 60 PSVLARLDRFEIDAVIRSTAAAYPNPALRSLDAIHLATAQTAGSVAPLTALVTYDNRLKE 119
+A L +D + + AAA P LRSLDA+HLA AQ G A +VT+D + +
Sbjct 69 ADFVAELTLLTVDDALVAEAAAIV-PHLRSLDALHLAGAQRIGVDA--VTIVTHDLGMAK 125
Query 120 AAEALSLAVVAP 131
AE+L AV P
Sbjct 126 TAESLGFAVHDP 137
>gi|78224268|ref|YP_386015.1| hypothetical protein Gmet_3076 [Geobacter metallireducens GS-15]
gi|78195523|gb|ABB33290.1| conserved hypothetical protein [Geobacter metallireducens GS-15]
Length=142
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/148 (33%), Positives = 68/148 (46%), Gaps = 22/148 (14%)
Query 1 VIYLETSALVKLIRIEVESDALADWLDD-------RTELRWITSALT----EVELSRAIR 49
++YL+TS+LVKL EV SD + W++ R + SALT +L R
Sbjct 2 ILYLDTSSLVKLYVEEVCSDTVRQWVESAEAVATCRVAYPEMLSALTRRHNRGDLPREDC 61
Query 50 AVSPEGLPAVPSVLARLDRFEIDA--VIRSTAAAYPNPALRSLDAIHLATAQ--TAGSVA 105
V E LD EI+A ++R LR DA+HLA A+ + A
Sbjct 62 EVVAECFAGEWEHFVALDFDEIEAGHLVRKY-------GLRGFDAVHLAAAKLLSNDCGA 114
Query 106 PLTALVTYDNRLKEAAEALSLAVVAPGQ 133
A ++DN+L AAEA A++A G
Sbjct 115 IEVAFSSFDNKLNGAAEAEGFALLAAGH 142
>gi|326771646|ref|ZP_08230931.1| toxin-antitoxin system, toxin component, PIN family [Actinomyces
viscosus C505]
gi|326637779|gb|EGE38680.1| toxin-antitoxin system, toxin component, PIN family [Actinomyces
viscosus C505]
Length=131
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/136 (37%), Positives = 69/136 (51%), Gaps = 11/136 (8%)
Query 1 VIYLETSALVKLIRIEVESDALADWLDDRTE--LRWITSALTEVELSRAIRAVSPEGLPA 58
V YL+TSA +KL+ E ES+ LA WL T +S L EL A R S
Sbjct 3 VYYLDTSAALKLLIEEKESEPLAAWLTSHTTDGDSLCSSFLLHTELHCAARRRSELDQET 62
Query 59 VPSVLARLDRFEIDAVIRSTA--AAYPNPALRSLDAIHLATAQTAGSVAPLTALVTYDNR 116
V S+L+ ++ +I RS AA + LR+ DAIHL A + A++TYD
Sbjct 63 VASLLSGINLIDIS---RSQLIDAARTSLGLRAADAIHLTVALDIRA----DAIITYDIE 115
Query 117 LKEAAEALSLAVVAPG 132
++ AA + +L+ VAP
Sbjct 116 MQNAARSCNLSPVAPS 131
>gi|340358514|ref|ZP_08681031.1| PilT domain protein [Actinomyces sp. oral taxon 448 str. F0400]
gi|339886364|gb|EGQ76022.1| PilT domain protein [Actinomyces sp. oral taxon 448 str. F0400]
Length=137
Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/139 (35%), Positives = 67/139 (49%), Gaps = 13/139 (9%)
Query 1 VIYLETSALVKLIRIEVESDALADWL--------DDRTELRWITSALTEVELSRAIRAVS 52
+ YL+TSA +KL+ E ES+ LA WL D ++ +S L EL A R
Sbjct 3 IYYLDTSAALKLLIEEDESEPLAQWLNQTVSHSPDSAGDIALCSSFLLSTELHCAARRRR 62
Query 53 PEGLPAVPSVLARLDRFEIDAVIRSTAAAYPNPALRSLDAIHLATAQTAGSVAPLTALVT 112
AV ++L+ ++ ++ AA + LRS DAIHL A S AL+T
Sbjct 63 ELDEEAVATLLSGVELVDVSREHLLNAAG-DSAGLRSADAIHLTVALDIRS----DALLT 117
Query 113 YDNRLKEAAEALSLAVVAP 131
YD ++ AA L VVAP
Sbjct 118 YDREMRIAARRRGLGVVAP 136
>gi|307701081|ref|ZP_07638106.1| toxin-antitoxin system, toxin component, PIN family [Mobiluncus
mulieris FB024-16]
gi|307614076|gb|EFN93320.1| toxin-antitoxin system, toxin component, PIN family [Mobiluncus
mulieris FB024-16]
Length=87
Score = 47.4 bits (111), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/75 (42%), Positives = 43/75 (58%), Gaps = 2/75 (2%)
Query 61 SVLARLDRFEIDAVIRSTAAAYPNPALRSLDAIHLATAQTAGSVAPLTALVTYDNRLKEA 120
++L L+ I + I A LRSLDAIHLATA G L ALVTYD RL A
Sbjct 15 AILDALNLVRISSQICDLAGLLEPTVLRSLDAIHLATALQVGD--DLEALVTYDLRLGVA 72
Query 121 AEALSLAVVAPGQAR 135
A+ + + +++PG ++
Sbjct 73 AQMVGIPLLSPGYSK 87
>gi|306818894|ref|ZP_07452615.1| conserved hypothetical protein [Mobiluncus mulieris ATCC 35239]
gi|304648296|gb|EFM45600.1| conserved hypothetical protein [Mobiluncus mulieris ATCC 35239]
Length=97
Score = 47.0 bits (110), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/75 (42%), Positives = 43/75 (58%), Gaps = 2/75 (2%)
Query 61 SVLARLDRFEIDAVIRSTAAAYPNPALRSLDAIHLATAQTAGSVAPLTALVTYDNRLKEA 120
++L L+ I + I A LRSLDAIHLATA G L ALVTYD RL A
Sbjct 25 AILDALNLVRISSQICDLAGLLEPTVLRSLDAIHLATALQVGD--DLEALVTYDLRLGVA 82
Query 121 AEALSLAVVAPGQAR 135
A+ + + +++PG ++
Sbjct 83 AQMVGIPLLSPGYSK 97
>gi|269977174|ref|ZP_06184147.1| toxin-antitoxin system, toxin component, PIN family [Mobiluncus
mulieris 28-1]
gi|269934477|gb|EEZ91038.1| toxin-antitoxin system, toxin component, PIN family [Mobiluncus
mulieris 28-1]
Length=87
Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/75 (42%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Query 61 SVLARLDRFEIDAVIRSTAAAYPNPALRSLDAIHLATAQTAGSVAPLTALVTYDNRLKEA 120
++L L+ I + I A LRSLDAIHLATA G L ALVTYD RL A
Sbjct 15 AILDALNLVRISSQICDLAGLLEPAVLRSLDAIHLATALQVGD--DLEALVTYDLRLGVA 72
Query 121 AEALSLAVVAPGQAR 135
A+ + +++PG ++
Sbjct 73 AQMGGIPLLSPGYSK 87
>gi|227875583|ref|ZP_03993723.1| hypothetical protein HMPREF0577_1024 [Mobiluncus mulieris ATCC
35243]
gi|227843919|gb|EEJ54088.1| hypothetical protein HMPREF0577_1024 [Mobiluncus mulieris ATCC
35243]
Length=97
Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/75 (42%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Query 61 SVLARLDRFEIDAVIRSTAAAYPNPALRSLDAIHLATAQTAGSVAPLTALVTYDNRLKEA 120
++L L+ I + I A LRSLDAIHLATA G L ALVTYD RL A
Sbjct 25 AILDALNLVRISSQICDLAGLLEPAVLRSLDAIHLATALQVGD--DLEALVTYDLRLGVA 82
Query 121 AEALSLAVVAPGQAR 135
A+ + +++PG ++
Sbjct 83 AQMGGIPLLSPGYSK 97
>gi|284045881|ref|YP_003396221.1| hypothetical protein Cwoe_4432 [Conexibacter woesei DSM 14684]
gi|283950102|gb|ADB52846.1| conserved hypothetical protein [Conexibacter woesei DSM 14684]
Length=131
Score = 44.3 bits (103), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/132 (32%), Positives = 69/132 (53%), Gaps = 7/132 (5%)
Query 2 IYLETSALVKLIRIEVESDALADWLDDRTELRWITSALTEVELSR-AIR-AVSPEGLPAV 59
+YL+TSAL +++ E + DA+ L + ++S L +EL R +R ++ E +
Sbjct 4 VYLDTSALGRVVLDEPDGDAIGAALAGFEAV--VSSRLLRIELHRLGLRTGIASE---EI 58
Query 60 PSVLARLDRFEIDAVIRSTAAAYPNPALRSLDAIHLATAQTAGSVAPLTALVTYDNRLKE 119
LA + +D I + A A ++ +LDAIHLATA + + +++T+D RL E
Sbjct 59 EGWLAGVAIVPLDDAILAAAEAVSPSSVATLDAIHLATALQLAAERHIASIMTFDARLAE 118
Query 120 AAEALSLAVVAP 131
A L V+ P
Sbjct 119 GAREHGLDVITP 130
>gi|328953359|ref|YP_004370693.1| hypothetical protein Desac_1665 [Desulfobacca acetoxidans DSM
11109]
gi|328453683|gb|AEB09512.1| hypothetical protein Desac_1665 [Desulfobacca acetoxidans DSM
11109]
Length=148
Score = 42.4 bits (98), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 48/138 (35%), Positives = 66/138 (48%), Gaps = 14/138 (10%)
Query 3 YLETSALVKLIRIEVESDAL------ADWLDDRTELRWI--TSAL-TEVELSRAIRAVSP 53
+ +TSALVKL E ++AL AD ++L +I TSAL T+V + R V
Sbjct 6 FFDTSALVKLYHQEKGTEALEHLISAADTCIVISDLSFIEITSALATKVRMGLIDRDVFE 65
Query 54 EGLPAVPSVLARLDRFEIDAVIRSTAAAYPNPA-----LRSLDAIHLATAQTAGSVAPLT 108
L A + E+D ++ AA LR+LDA+ LA+A TA +PL
Sbjct 66 AVLDCFIRDFAGYEIIEVDHAVKMQAADLLKTIVVTRRLRTLDALQLASALTAARKSPLD 125
Query 109 ALVTYDNRLKEAAEALSL 126
V D L EAA+A L
Sbjct 126 LFVAADIFLIEAAQAKDL 143
>gi|308274638|emb|CBX31237.1| hypothetical protein N47_E47490 [uncultured Desulfobacterium
sp.]
Length=149
Score = 42.0 bits (97), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 34/129 (27%), Positives = 61/129 (48%), Gaps = 16/129 (12%)
Query 2 IYLETSALVKLIRIEVESDALADWLDDRTELRWITSA-LTEVELSRAI------RAVSPE 54
+YL+++AL+KL E ++ L LD+ + +T A +T++E A + + E
Sbjct 3 LYLDSNALIKLYHEEAGTNELVKLLDENEDNLILTIADITKIEFYSAFLKRVRKKEIKYE 62
Query 55 G----LPAVPSVLARLDRFEIDAVIRSTAAAY-----PNPALRSLDAIHLATAQTAGSVA 105
L A + L + E+D ++++ A L +LD+I LA A A +
Sbjct 63 TVKKVLSAFENDLYMFNFIEVDNIVKAIAVDLLKTIANKQGLTTLDSIQLAAAINANQIF 122
Query 106 PLTALVTYD 114
P+ + VT D
Sbjct 123 PIDSFVTSD 131
>gi|336177878|ref|YP_004583253.1| hypothetical protein FsymDg_1894 [Frankia symbiont of Datisca
glomerata]
gi|334858858|gb|AEH09332.1| hypothetical protein FsymDg_1894 [Frankia symbiont of Datisca
glomerata]
Length=136
Score = 41.6 bits (96), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 42/138 (31%), Positives = 66/138 (48%), Gaps = 10/138 (7%)
Query 2 IYLETSALVKLIRIEVESDALADWLDDRTELR--WITSALTEVELSRAIRAV----SPEG 55
IYL++SA++K + E +S AL +D E ++S+L +E++ A+RA S
Sbjct 3 IYLDSSAILKRLVAETDSLALVAAVDKHHEDGDLLVSSSLAWIEVTHALRARFGTDSASA 62
Query 56 LPAVPSVLARLDRFEIDAVIRSTAAAYPNPALRSLDAIHLATAQTAGSVAPLTALVTYDN 115
+ L+ + + + S A LRSLDAIHL +A + ++TYD+
Sbjct 63 TVHADAALSGVAEHPLSPEVVSLARRIGPAVLRSLDAIHLTSALLLDA----DQMLTYDD 118
Query 116 RLKEAAEALSLAVVAPGQ 133
RL A L APG
Sbjct 119 RLAMACAQSGLVFTAPGH 136
>gi|343524031|ref|ZP_08760991.1| putative toxin-antitoxin system, toxin component, PIN family
[Actinomyces sp. oral taxon 175 str. F0384]
gi|343399012|gb|EGV11537.1| putative toxin-antitoxin system, toxin component, PIN family
[Actinomyces sp. oral taxon 175 str. F0384]
Length=133
Score = 40.8 bits (94), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 42/134 (32%), Positives = 67/134 (50%), Gaps = 7/134 (5%)
Query 1 VIYLETS-ALVKLIRIEVESDALADWLDDRTELRWITSALTEVELSRAIRAVSPEGLPAV 59
+IYL+TS AL+ L+ +A +D ++S L VE++RA + + V
Sbjct 1 MIYLDTSVALLSLLGQPGADEAAQLIMDAHATEGLVSSCLLTVEMARAAHREHFD-IRVV 59
Query 60 PSVLARLDRFEI--DAVIRSTAAAYPNPALRSLDAIHLATAQTAGSVAPLTALVTYDNRL 117
+A ++ EI D + R++A L+SLDAIHLATA ++T+D RL
Sbjct 60 DEFIAGVELIEIGPDVIARASAL---TGELKSLDAIHLATATLLDDPRHPVTVLTHDARL 116
Query 118 KEAAEALSLAVVAP 131
+AA + L + P
Sbjct 117 ADAARSRGLGAIDP 130
Lambda K H
0.317 0.129 0.353
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 129391415580
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40