BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv1964 Length=265 Score E Sequences producing significant alignments: (Bits) Value gi|253798988|ref|YP_003031989.1| hypothetical protein TBMG_02026... 520 1e-145 gi|15609101|ref|NP_216480.1| integral membrane protein YrbE3A [M... 518 2e-145 gi|340626973|ref|YP_004745425.1| hypothetical protein MCAN_19801... 517 6e-145 gi|183982884|ref|YP_001851175.1| integral membrane protein YrbE3... 451 7e-125 gi|118618294|ref|YP_906626.1| integral membrane protein YrbE3A [... 445 2e-123 gi|120404938|ref|YP_954767.1| hypothetical protein Mvan_3984 [My... 347 1e-93 gi|120401386|ref|YP_951215.1| hypothetical protein Mvan_0361 [My... 340 9e-92 gi|118619125|ref|YP_907457.1| integral membrane protein YrbE3A_1... 332 2e-89 gi|183984020|ref|YP_001852311.1| integral membrane protein YrbE3... 332 2e-89 gi|145222687|ref|YP_001133365.1| hypothetical protein Mflv_2099 ... 326 2e-87 gi|120405558|ref|YP_955387.1| hypothetical protein Mvan_4606 [My... 325 4e-87 gi|118470891|ref|YP_884757.1| hypothetical protein MSMEG_0344 [M... 320 1e-85 gi|108798492|ref|YP_638689.1| hypothetical protein Mmcs_1522 [My... 319 3e-85 gi|126436744|ref|YP_001072435.1| hypothetical protein Mjls_4172 ... 318 5e-85 gi|296171119|ref|ZP_06852572.1| integral membrane protein [Mycob... 307 8e-82 gi|240170711|ref|ZP_04749370.1| hypothetical protein MkanA1_1545... 305 6e-81 gi|49072908|gb|AAT51759.1| TrnB1 [Mycobacterium vanbaalenii PYR-1] 304 7e-81 gi|120401520|ref|YP_951349.1| hypothetical protein Mvan_0498 [My... 304 8e-81 gi|108798619|ref|YP_638816.1| hypothetical protein Mmcs_1650 [My... 304 9e-81 gi|145221253|ref|YP_001131931.1| hypothetical protein Mflv_0654 ... 301 7e-80 gi|126436762|ref|YP_001072453.1| hypothetical protein Mjls_4190 ... 299 3e-79 gi|120405354|ref|YP_955183.1| hypothetical protein Mvan_4401 [My... 296 1e-78 gi|254820119|ref|ZP_05225120.1| hypothetical protein MintA_09341... 296 2e-78 gi|342857630|ref|ZP_08714286.1| integral membrane protein YrbE3A... 291 5e-77 gi|15610637|ref|NP_218018.1| integral membrane protein YrbE4a [M... 287 1e-75 gi|118619254|ref|YP_907586.1| membrane protein YrbE4A [Mycobacte... 287 1e-75 gi|342857466|ref|ZP_08714122.1| TrnB1 protein [Mycobacterium col... 285 5e-75 gi|240170056|ref|ZP_04748715.1| membrane protein YrbE4A [Mycobac... 284 9e-75 gi|118466063|ref|YP_881276.1| TrnB1 protein [Mycobacterium avium... 284 1e-74 gi|126437566|ref|YP_001073257.1| hypothetical protein Mjls_5002 ... 283 2e-74 gi|342862240|ref|ZP_08718882.1| hypothetical protein MCOL_25241 ... 282 3e-74 gi|41408215|ref|NP_961051.1| hypothetical protein MAP2117c [Myco... 281 5e-74 gi|108801582|ref|YP_641779.1| hypothetical protein Mmcs_4619 [My... 281 8e-74 gi|296166535|ref|ZP_06848966.1| membrane protein YrbE4A [Mycobac... 279 3e-73 gi|333992272|ref|YP_004524886.1| hypothetical protein JDM601_363... 279 3e-73 gi|41406660|ref|NP_959496.1| hypothetical protein MAP0562 [Mycob... 279 3e-73 gi|118470037|ref|YP_890128.1| hypothetical protein MSMEG_5902 [M... 279 3e-73 gi|183984957|ref|YP_001853248.1| membrane protein YrbE4A [Mycoba... 277 9e-73 gi|15843113|ref|NP_338150.1| hypothetical protein MT3605 [Mycoba... 277 9e-73 gi|342861420|ref|ZP_08718068.1| hypothetical protein MCOL_21151 ... 276 2e-72 gi|169631233|ref|YP_001704882.1| hypothetical protein MAB_4155c ... 276 2e-72 gi|118470268|ref|YP_889052.1| hypothetical protein MSMEG_4796 [M... 276 3e-72 gi|183984680|ref|YP_001852971.1| hypothetical protein MMAR_4712 ... 275 7e-72 gi|342860430|ref|ZP_08717081.1| hypothetical protein MCOL_16186 ... 274 9e-72 gi|312138208|ref|YP_004005544.1| integral membrane protein yrbe2... 273 1e-71 gi|254773835|ref|ZP_05215351.1| TrnB1 protein [Mycobacterium avi... 273 2e-71 gi|41406855|ref|NP_959691.1| hypothetical protein MAP0757 [Mycob... 273 2e-71 gi|325674886|ref|ZP_08154573.1| membrane protein YrbE4A [Rhodoco... 273 2e-71 gi|120406152|ref|YP_955981.1| hypothetical protein Mvan_5204 [My... 273 2e-71 gi|315443550|ref|YP_004076429.1| ABC transporter involved in res... 273 2e-71 >gi|253798988|ref|YP_003031989.1| hypothetical protein TBMG_02026 [Mycobacterium tuberculosis KZN 1435] gi|254550984|ref|ZP_05141431.1| hypothetical protein Mtube_11066 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|297634533|ref|ZP_06952313.1| hypothetical protein MtubK4_10441 [Mycobacterium tuberculosis KZN 4207] gi|253320491|gb|ACT25094.1| hypothetical membrane protein yrbE3A [Mycobacterium tuberculosis KZN 1435] gi|339294889|gb|AEJ47000.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis CCDC5079] gi|339298512|gb|AEJ50622.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis CCDC5180] Length=269 Score = 520 bits (1338), Expect = 1e-145, Method: Compositional matrix adjust. Identities = 265/265 (100%), Positives = 265/265 (100%), Gaps = 0/265 (0%) Query 1 MVIVADKAAGRVADPVLRPVGALGDFFAMTLDTSVCMFKPPFAWREYLLQCWFVARVSTL 60 MVIVADKAAGRVADPVLRPVGALGDFFAMTLDTSVCMFKPPFAWREYLLQCWFVARVSTL Sbjct 5 MVIVADKAAGRVADPVLRPVGALGDFFAMTLDTSVCMFKPPFAWREYLLQCWFVARVSTL 64 Query 61 PGVLMTIPWAVISGFLFNVLLTDIGAADFSGTGCAIFTVNQSAPIVTVLVVAGAGATAMC 120 PGVLMTIPWAVISGFLFNVLLTDIGAADFSGTGCAIFTVNQSAPIVTVLVVAGAGATAMC Sbjct 65 PGVLMTIPWAVISGFLFNVLLTDIGAADFSGTGCAIFTVNQSAPIVTVLVVAGAGATAMC 124 Query 121 ADLGARTIREELDALRVMGINPIQALAAPRVLAATTVSLALNSVVTATGLIGAFFCSVFL 180 ADLGARTIREELDALRVMGINPIQALAAPRVLAATTVSLALNSVVTATGLIGAFFCSVFL Sbjct 125 ADLGARTIREELDALRVMGINPIQALAAPRVLAATTVSLALNSVVTATGLIGAFFCSVFL 184 Query 181 MHVSAGAWVTGLTTLTHTVDVVISMIKATLFGLMAGLIACYKGMSVGGGPAGVGRAVNET 240 MHVSAGAWVTGLTTLTHTVDVVISMIKATLFGLMAGLIACYKGMSVGGGPAGVGRAVNET Sbjct 185 MHVSAGAWVTGLTTLTHTVDVVISMIKATLFGLMAGLIACYKGMSVGGGPAGVGRAVNET 244 Query 241 VVFAFIVLFVINIVVTAVGIPFMVS 265 VVFAFIVLFVINIVVTAVGIPFMVS Sbjct 245 VVFAFIVLFVINIVVTAVGIPFMVS 269 >gi|15609101|ref|NP_216480.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis H37Rv] gi|15841439|ref|NP_336476.1| hypothetical protein MT2016 [Mycobacterium tuberculosis CDC1551] gi|148661773|ref|YP_001283296.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis H37Ra] 59 more sequence titles Length=265 Score = 518 bits (1335), Expect = 2e-145, Method: Compositional matrix adjust. Identities = 265/265 (100%), Positives = 265/265 (100%), Gaps = 0/265 (0%) Query 1 MVIVADKAAGRVADPVLRPVGALGDFFAMTLDTSVCMFKPPFAWREYLLQCWFVARVSTL 60 MVIVADKAAGRVADPVLRPVGALGDFFAMTLDTSVCMFKPPFAWREYLLQCWFVARVSTL Sbjct 1 MVIVADKAAGRVADPVLRPVGALGDFFAMTLDTSVCMFKPPFAWREYLLQCWFVARVSTL 60 Query 61 PGVLMTIPWAVISGFLFNVLLTDIGAADFSGTGCAIFTVNQSAPIVTVLVVAGAGATAMC 120 PGVLMTIPWAVISGFLFNVLLTDIGAADFSGTGCAIFTVNQSAPIVTVLVVAGAGATAMC Sbjct 61 PGVLMTIPWAVISGFLFNVLLTDIGAADFSGTGCAIFTVNQSAPIVTVLVVAGAGATAMC 120 Query 121 ADLGARTIREELDALRVMGINPIQALAAPRVLAATTVSLALNSVVTATGLIGAFFCSVFL 180 ADLGARTIREELDALRVMGINPIQALAAPRVLAATTVSLALNSVVTATGLIGAFFCSVFL Sbjct 121 ADLGARTIREELDALRVMGINPIQALAAPRVLAATTVSLALNSVVTATGLIGAFFCSVFL 180 Query 181 MHVSAGAWVTGLTTLTHTVDVVISMIKATLFGLMAGLIACYKGMSVGGGPAGVGRAVNET 240 MHVSAGAWVTGLTTLTHTVDVVISMIKATLFGLMAGLIACYKGMSVGGGPAGVGRAVNET Sbjct 181 MHVSAGAWVTGLTTLTHTVDVVISMIKATLFGLMAGLIACYKGMSVGGGPAGVGRAVNET 240 Query 241 VVFAFIVLFVINIVVTAVGIPFMVS 265 VVFAFIVLFVINIVVTAVGIPFMVS Sbjct 241 VVFAFIVLFVINIVVTAVGIPFMVS 265 >gi|340626973|ref|YP_004745425.1| hypothetical protein MCAN_19801 [Mycobacterium canettii CIPT 140010059] gi|340005163|emb|CCC44312.1| conserved hypothetical integral membrane protein YRBE3A [Mycobacterium canettii CIPT 140010059] Length=265 Score = 517 bits (1332), Expect = 6e-145, Method: Compositional matrix adjust. Identities = 264/265 (99%), Positives = 264/265 (99%), Gaps = 0/265 (0%) Query 1 MVIVADKAAGRVADPVLRPVGALGDFFAMTLDTSVCMFKPPFAWREYLLQCWFVARVSTL 60 MVI ADKAAGRVADPVLRPVGALGDFFAMTLDTSVCMFKPPFAWREYLLQCWFVARVSTL Sbjct 1 MVIAADKAAGRVADPVLRPVGALGDFFAMTLDTSVCMFKPPFAWREYLLQCWFVARVSTL 60 Query 61 PGVLMTIPWAVISGFLFNVLLTDIGAADFSGTGCAIFTVNQSAPIVTVLVVAGAGATAMC 120 PGVLMTIPWAVISGFLFNVLLTDIGAADFSGTGCAIFTVNQSAPIVTVLVVAGAGATAMC Sbjct 61 PGVLMTIPWAVISGFLFNVLLTDIGAADFSGTGCAIFTVNQSAPIVTVLVVAGAGATAMC 120 Query 121 ADLGARTIREELDALRVMGINPIQALAAPRVLAATTVSLALNSVVTATGLIGAFFCSVFL 180 ADLGARTIREELDALRVMGINPIQALAAPRVLAATTVSLALNSVVTATGLIGAFFCSVFL Sbjct 121 ADLGARTIREELDALRVMGINPIQALAAPRVLAATTVSLALNSVVTATGLIGAFFCSVFL 180 Query 181 MHVSAGAWVTGLTTLTHTVDVVISMIKATLFGLMAGLIACYKGMSVGGGPAGVGRAVNET 240 MHVSAGAWVTGLTTLTHTVDVVISMIKATLFGLMAGLIACYKGMSVGGGPAGVGRAVNET Sbjct 181 MHVSAGAWVTGLTTLTHTVDVVISMIKATLFGLMAGLIACYKGMSVGGGPAGVGRAVNET 240 Query 241 VVFAFIVLFVINIVVTAVGIPFMVS 265 VVFAFIVLFVINIVVTAVGIPFMVS Sbjct 241 VVFAFIVLFVINIVVTAVGIPFMVS 265 >gi|183982884|ref|YP_001851175.1| integral membrane protein YrbE3A [Mycobacterium marinum M] gi|183176210|gb|ACC41320.1| conserved hypothetical integral membrane protein YrbE3A [Mycobacterium marinum M] Length=282 Score = 451 bits (1159), Expect = 7e-125, Method: Compositional matrix adjust. Identities = 244/277 (89%), Positives = 253/277 (92%), Gaps = 12/277 (4%) Query 1 MVIVADKAAGRVADPV------------LRPVGALGDFFAMTLDTSVCMFKPPFAWREYL 48 MV + D+AA VADPV +PV ALGDFFAMTLDT V MF+PPFAWREYL Sbjct 6 MVALTDRAASPVADPVADAVARPLAGSVTKPVRALGDFFAMTLDTFVSMFRPPFAWREYL 65 Query 49 LQCWFVARVSTLPGVLMTIPWAVISGFLFNVLLTDIGAADFSGTGCAIFTVNQSAPIVTV 108 LQCWFVARVSTLPGVLMTIPWAVISGFLFNVLLTDIGAADFSGTGCAIFTV+QSAPIVTV Sbjct 66 LQCWFVARVSTLPGVLMTIPWAVISGFLFNVLLTDIGAADFSGTGCAIFTVDQSAPIVTV 125 Query 109 LVVAGAGATAMCADLGARTIREELDALRVMGINPIQALAAPRVLAATTVSLALNSVVTAT 168 LVVAGAGATAMCADLGARTIREELDALRVMGINPIQAL PRVLAATTVSLAL+S+V AT Sbjct 126 LVVAGAGATAMCADLGARTIREELDALRVMGINPIQALVVPRVLAATTVSLALSSLVIAT 185 Query 169 GLIGAFFCSVFLMHVSAGAWVTGLTTLTHTVDVVISMIKATLFGLMAGLIACYKGMSVGG 228 GLIGAF CSVFLMHVSAGAWVTGLTTLTHTVDVVISMIKATLFGLMAGLIACYKG+SVGG Sbjct 186 GLIGAFLCSVFLMHVSAGAWVTGLTTLTHTVDVVISMIKATLFGLMAGLIACYKGISVGG 245 Query 229 GPAGVGRAVNETVVFAFIVLFVINIVVTAVGIPFMVS 265 GPAGVGRAVNETVVFAF+VLFVINIVVTAVGIPFMVS Sbjct 246 GPAGVGRAVNETVVFAFVVLFVINIVVTAVGIPFMVS 282 >gi|118618294|ref|YP_906626.1| integral membrane protein YrbE3A [Mycobacterium ulcerans Agy99] gi|118570404|gb|ABL05155.1| conserved hypothetical integral membrane protein YrbE3A [Mycobacterium ulcerans Agy99] Length=277 Score = 445 bits (1145), Expect = 2e-123, Method: Compositional matrix adjust. Identities = 242/277 (88%), Positives = 251/277 (91%), Gaps = 12/277 (4%) Query 1 MVIVADKAAGRVADPV------------LRPVGALGDFFAMTLDTSVCMFKPPFAWREYL 48 MV + D+AA VADPV +PV ALGDFFAMTLDT V MF+PPFAWREYL Sbjct 1 MVTLTDRAASPVADPVADPVARPLAGSVTKPVRALGDFFAMTLDTFVSMFRPPFAWREYL 60 Query 49 LQCWFVARVSTLPGVLMTIPWAVISGFLFNVLLTDIGAADFSGTGCAIFTVNQSAPIVTV 108 LQCWFVARVSTLPGVLMTIPWAVISGFLFNVLLTDIGAADFSGTGCAIFTV+QSAPIVTV Sbjct 61 LQCWFVARVSTLPGVLMTIPWAVISGFLFNVLLTDIGAADFSGTGCAIFTVDQSAPIVTV 120 Query 109 LVVAGAGATAMCADLGARTIREELDALRVMGINPIQALAAPRVLAATTVSLALNSVVTAT 168 LVVAGAGATAMCADLGARTIREELDALRVMGINPIQAL PRVL ATTVS AL+S+V AT Sbjct 121 LVVAGAGATAMCADLGARTIREELDALRVMGINPIQALVVPRVLGATTVSPALSSLVIAT 180 Query 169 GLIGAFFCSVFLMHVSAGAWVTGLTTLTHTVDVVISMIKATLFGLMAGLIACYKGMSVGG 228 GLIGAF CSVFLMHVSAGAWVTGLTTLTHTVDVVISMIKATLFGLMAGLIACYKG+SVGG Sbjct 181 GLIGAFLCSVFLMHVSAGAWVTGLTTLTHTVDVVISMIKATLFGLMAGLIACYKGISVGG 240 Query 229 GPAGVGRAVNETVVFAFIVLFVINIVVTAVGIPFMVS 265 GPAGVGRAVNETVVFAF+VLFVINIVVTAVGIPFMVS Sbjct 241 GPAGVGRAVNETVVFAFVVLFVINIVVTAVGIPFMVS 277 >gi|120404938|ref|YP_954767.1| hypothetical protein Mvan_3984 [Mycobacterium vanbaalenii PYR-1] gi|119957756|gb|ABM14761.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii PYR-1] Length=257 Score = 347 bits (890), Expect = 1e-93, Method: Compositional matrix adjust. Identities = 175/253 (70%), Positives = 210/253 (84%), Gaps = 0/253 (0%) Query 13 ADPVLRPVGALGDFFAMTLDTSVCMFKPPFAWREYLLQCWFVARVSTLPGVLMTIPWAVI 72 + P +PV ALG FFAM+LDT + MF+ PFA+REY++Q WFVARVS LP +++T+P++V+ Sbjct 5 SHPATKPVRALGGFFAMSLDTFILMFQRPFAFREYVIQTWFVARVSVLPALMLTMPYSVL 64 Query 73 SGFLFNVLLTDIGAADFSGTGCAIFTVNQSAPIVTVLVVAGAGATAMCADLGARTIREEL 132 F FN+LL + GA+DFSGTG AI TVNQ PIVTVLVV+GAGATAMCADLGARTIR+EL Sbjct 65 LVFTFNILLNEFGASDFSGTGAAIGTVNQIGPIVTVLVVSGAGATAMCADLGARTIRDEL 124 Query 133 DALRVMGINPIQALAAPRVLAATTVSLALNSVVTATGLIGAFFCSVFLMHVSAGAWVTGL 192 DALRVMGINP+QAL PRVLAATTV+LAL++ V GL GAF V++ HVSAGA+++GL Sbjct 125 DALRVMGINPVQALVVPRVLAATTVALALSASVIIVGLAGAFLFCVYVQHVSAGAFISGL 184 Query 193 TTLTHTVDVVISMIKATLFGLMAGLIACYKGMSVGGGPAGVGRAVNETVVFAFIVLFVIN 252 T LT DVV+S+IKATLFG AGLIACYKG+ VGGGPAGVG AVNETVVF F+VLF IN Sbjct 185 TLLTGAGDVVVSLIKATLFGAAAGLIACYKGVYVGGGPAGVGNAVNETVVFTFMVLFAIN 244 Query 253 IVVTAVGIPFMVS 265 ++VTAVGI F VS Sbjct 245 VIVTAVGIQFTVS 257 >gi|120401386|ref|YP_951215.1| hypothetical protein Mvan_0361 [Mycobacterium vanbaalenii PYR-1] gi|119954204|gb|ABM11209.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii PYR-1] Length=256 Score = 340 bits (873), Expect = 9e-92, Method: Compositional matrix adjust. Identities = 170/255 (67%), Positives = 209/255 (82%), Gaps = 0/255 (0%) Query 11 RVADPVLRPVGALGDFFAMTLDTSVCMFKPPFAWREYLLQCWFVARVSTLPGVLMTIPWA 70 ++A +P+ +G FFAM++DT V M +PPFA+REY+LQ WFVARVS LP +++T+P++ Sbjct 2 KLATAATKPLRGVGGFFAMSIDTFVAMVRPPFAFREYVLQSWFVARVSVLPALMLTLPYS 61 Query 71 VISGFLFNVLLTDIGAADFSGTGCAIFTVNQSAPIVTVLVVAGAGATAMCADLGARTIRE 130 V+ F FN+LL + GAADF+GTG AI TV+Q PIVTVLVV+GAGATAMCADLGARTIRE Sbjct 62 VLLVFTFNILLKEFGAADFAGTGAAIGTVSQIGPIVTVLVVSGAGATAMCADLGARTIRE 121 Query 131 ELDALRVMGINPIQALAAPRVLAATTVSLALNSVVTATGLIGAFFCSVFLMHVSAGAWVT 190 ELDA++VMGINPIQAL PRVLAATTV+LAL++ V GL GAFF VF+ +VSAGA+++ Sbjct 122 ELDAMKVMGINPIQALVVPRVLAATTVALALSATVIIAGLAGAFFFCVFVQNVSAGAFIS 181 Query 191 GLTTLTHTVDVVISMIKATLFGLMAGLIACYKGMSVGGGPAGVGRAVNETVVFAFIVLFV 250 G+T LT DV +S+ KATLFGL AGLIACYKG+SVGGGPAGVG AVNETVVF F+VLF Sbjct 182 GMTLLTGAADVFVSLAKATLFGLAAGLIACYKGISVGGGPAGVGNAVNETVVFTFMVLFA 241 Query 251 INIVVTAVGIPFMVS 265 IN++ TAVGI F V Sbjct 242 INVIATAVGIQFTVQ 256 >gi|118619125|ref|YP_907457.1| integral membrane protein YrbE3A_1 [Mycobacterium ulcerans Agy99] gi|118571235|gb|ABL05986.1| conserved hypothetical integral membrane protein YrbE3A_1 [Mycobacterium ulcerans Agy99] Length=255 Score = 332 bits (852), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 170/245 (70%), Positives = 198/245 (81%), Gaps = 0/245 (0%) Query 16 VLRPVGALGDFFAMTLDTSVCMFKPPFAWREYLLQCWFVARVSTLPGVLMTIPWAVISGF 75 V +P+ A G F++M LDT V M PPFAWREY+ Q WFVARVS LP +++TIP+ V+ F Sbjct 7 VAKPLRAFGGFYSMALDTFVAMVHPPFAWREYIAQAWFVARVSLLPTLMLTIPYTVLLTF 66 Query 76 LFNVLLTDIGAADFSGTGCAIFTVNQSAPIVTVLVVAGAGATAMCADLGARTIREELDAL 135 + N+LLT+IGAADFSGTG A+ +V Q PIVTVLVVAGAGATAMCADLGARTIREELDAL Sbjct 67 IENILLTEIGAADFSGTGAALGSVRQIGPIVTVLVVAGAGATAMCADLGARTIREELDAL 126 Query 136 RVMGINPIQALAAPRVLAATTVSLALNSVVTATGLIGAFFCSVFLMHVSAGAWVTGLTTL 195 RVMG++PIQAL PRVLAATTVSLAL++ V GL GA+F VF+ HVS GA+ GLT + Sbjct 127 RVMGVDPIQALVVPRVLAATTVSLALSASVILVGLSGAYFFCVFIQHVSPGAFAAGLTLI 186 Query 196 THTVDVVISMIKATLFGLMAGLIACYKGMSVGGGPAGVGRAVNETVVFAFIVLFVINIVV 255 T DVVI+++KA LFGL AGLIACYKG+SVGGGPAGVG AVNETVVF F+ LF INIV Sbjct 187 IGTTDVVIALVKAALFGLSAGLIACYKGISVGGGPAGVGNAVNETVVFTFMALFAINIVA 246 Query 256 TAVGI 260 TAV I Sbjct 247 TAVAI 251 >gi|183984020|ref|YP_001852311.1| integral membrane protein YrbE3A_1 [Mycobacterium marinum M] gi|183177346|gb|ACC42456.1| conserved hypothetical integral membrane protein YrbE3A_1 [Mycobacterium marinum M] Length=255 Score = 332 bits (852), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 170/245 (70%), Positives = 198/245 (81%), Gaps = 0/245 (0%) Query 16 VLRPVGALGDFFAMTLDTSVCMFKPPFAWREYLLQCWFVARVSTLPGVLMTIPWAVISGF 75 V +P+ A G F++M LDT V M PPFAWREY+ Q WFVARVS LP +++TIP+ V+ F Sbjct 7 VAKPLRAFGGFYSMALDTFVAMVHPPFAWREYIAQAWFVARVSLLPTLMLTIPYTVLLTF 66 Query 76 LFNVLLTDIGAADFSGTGCAIFTVNQSAPIVTVLVVAGAGATAMCADLGARTIREELDAL 135 + N+LLT+IGAADFSGTG A+ +V Q PIVTVLVVAGAGATAMCADLGARTIREELDAL Sbjct 67 IENILLTEIGAADFSGTGAALGSVRQIGPIVTVLVVAGAGATAMCADLGARTIREELDAL 126 Query 136 RVMGINPIQALAAPRVLAATTVSLALNSVVTATGLIGAFFCSVFLMHVSAGAWVTGLTTL 195 RVMG++PIQAL PRVLAATTVSLAL++ V GL GA+F VF+ HVS GA+ GLT + Sbjct 127 RVMGVDPIQALVVPRVLAATTVSLALSASVILVGLSGAYFFCVFIQHVSPGAFAAGLTLI 186 Query 196 THTVDVVISMIKATLFGLMAGLIACYKGMSVGGGPAGVGRAVNETVVFAFIVLFVINIVV 255 T DVVI+++KA LFGL AGLIACYKG+SVGGGPAGVG AVNETVVF F+ LF INIV Sbjct 187 IGTTDVVIALVKAALFGLSAGLIACYKGISVGGGPAGVGNAVNETVVFTFMALFAINIVA 246 Query 256 TAVGI 260 TAV I Sbjct 247 TAVAI 251 >gi|145222687|ref|YP_001133365.1| hypothetical protein Mflv_2099 [Mycobacterium gilvum PYR-GCK] gi|315443151|ref|YP_004076030.1| ABC transporter involved in resistance to organic solvents, permease [Mycobacterium sp. Spyr1] gi|145215173|gb|ABP44577.1| protein of unknown function DUF140 [Mycobacterium gilvum PYR-GCK] gi|315261454|gb|ADT98195.1| ABC-type transport system involved in resistance to organic solvents, permease component [Mycobacterium sp. Spyr1] Length=255 Score = 326 bits (835), Expect = 2e-87, Method: Compositional matrix adjust. Identities = 164/243 (68%), Positives = 195/243 (81%), Gaps = 0/243 (0%) Query 18 RPVGALGDFFAMTLDTSVCMFKPPFAWREYLLQCWFVARVSTLPGVLMTIPWAVISGFLF 77 +P+ A G FF+M LDT V M KPPFAWRE++ Q WFVARVS +P +++TIP+ V+ F F Sbjct 9 KPMRAFGGFFSMALDTFVAMVKPPFAWREFISQSWFVARVSIVPTLMLTIPYTVLLTFTF 68 Query 78 NVLLTDIGAADFSGTGCAIFTVNQSAPIVTVLVVAGAGATAMCADLGARTIREELDALRV 137 N+LLT+ GAADFSGTG A+ TV Q PIVTVLVVAGAGATAMCADLGARTIREELDALRV Sbjct 69 NILLTEFGAADFSGTGAALGTVRQIGPIVTVLVVAGAGATAMCADLGARTIREELDALRV 128 Query 138 MGINPIQALAAPRVLAATTVSLALNSVVTATGLIGAFFCSVFLMHVSAGAWVTGLTTLTH 197 MG+NPIQAL PRVLAAT VSLAL++ V GL GA+F V++ +VS GA+ GLT + Sbjct 129 MGVNPIQALVVPRVLAATLVSLALSATVILVGLAGAYFFCVYIQNVSPGAFAAGLTLIIG 188 Query 198 TVDVVISMIKATLFGLMAGLIACYKGMSVGGGPAGVGRAVNETVVFAFIVLFVINIVVTA 257 DV+I+++KA LFGL AG+IACYKG+SVGGGPAGVG AVNETVVF F+ LF INIV TA Sbjct 189 ATDVIIALVKAALFGLSAGMIACYKGISVGGGPAGVGNAVNETVVFTFMALFAINIVATA 248 Query 258 VGI 260 V + Sbjct 249 VAV 251 >gi|120405558|ref|YP_955387.1| hypothetical protein Mvan_4606 [Mycobacterium vanbaalenii PYR-1] gi|119958376|gb|ABM15381.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii PYR-1] Length=255 Score = 325 bits (834), Expect = 4e-87, Method: Compositional matrix adjust. Identities = 167/248 (68%), Positives = 196/248 (80%), Gaps = 0/248 (0%) Query 13 ADPVLRPVGALGDFFAMTLDTSVCMFKPPFAWREYLLQCWFVARVSTLPGVLMTIPWAVI 72 +D + +PV A G F++M LDT V MF+PPFAWRE++ Q WFVARVS LP +L+TIP+ V+ Sbjct 4 SDVISKPVRAFGGFYSMALDTFVAMFQPPFAWREFISQAWFVARVSILPTLLLTIPYTVL 63 Query 73 SGFLFNVLLTDIGAADFSGTGCAIFTVNQSAPIVTVLVVAGAGATAMCADLGARTIREEL 132 F+ +LLT+IGA+DFSGTG A+ TV Q PIVTVLVVAGAGATAMCADLGARTIREEL Sbjct 64 LTFIETILLTEIGASDFSGTGAALGTVRQIGPIVTVLVVAGAGATAMCADLGARTIREEL 123 Query 133 DALRVMGINPIQALAAPRVLAATTVSLALNSVVTATGLIGAFFCSVFLMHVSAGAWVTGL 192 DALRVMGINPIQAL PRVLAA VSLAL++ V GL GA+F V++ VS GA+ GL Sbjct 124 DALRVMGINPIQALVVPRVLAAMVVSLALSATVILVGLSGAYFFVVYIQDVSPGAFAAGL 183 Query 193 TTLTHTVDVVISMIKATLFGLMAGLIACYKGMSVGGGPAGVGRAVNETVVFAFIVLFVIN 252 T + DVVI+++KA LFGL AGLIACYKG+SV GGPAGVG AVNETVVF F+ LF IN Sbjct 184 TLIIGATDVVIALVKAALFGLSAGLIACYKGISVRGGPAGVGNAVNETVVFTFMALFAIN 243 Query 253 IVVTAVGI 260 IV TAV I Sbjct 244 IVATAVAI 251 >gi|118470891|ref|YP_884757.1| hypothetical protein MSMEG_0344 [Mycobacterium smegmatis str. MC2 155] gi|118172178|gb|ABK73074.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2 155] Length=256 Score = 320 bits (821), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 168/250 (68%), Positives = 200/250 (80%), Gaps = 0/250 (0%) Query 15 PVLRPVGALGDFFAMTLDTSVCMFKPPFAWREYLLQCWFVARVSTLPGVLMTIPWAVISG 74 P +PVGALG FFAMTLD + + +PPFAWREYL Q WFVARVS +P +++T+P+ V+ Sbjct 6 PAAKPVGALGGFFAMTLDVFITIARPPFAWREYLNQTWFVARVSLVPALMLTVPYTVLLV 65 Query 75 FLFNVLLTDIGAADFSGTGCAIFTVNQSAPIVTVLVVAGAGATAMCADLGARTIREELDA 134 F FN+LL + GAADFSGTG AI TV+Q PIVTVLVVAGAG+TAMCADLGARTIREELDA Sbjct 66 FTFNILLIEFGAADFSGTGAAIGTVSQIGPIVTVLVVAGAGSTAMCADLGARTIREELDA 125 Query 135 LRVMGINPIQALAAPRVLAATTVSLALNSVVTATGLIGAFFCSVFLMHVSAGAWVTGLTT 194 +RVMGI+PIQAL PRVLAATTV+LAL++ V GL G F +VF+ HV G++V GLT Sbjct 126 MRVMGIDPIQALVVPRVLAATTVALALSATVIIVGLAGGFVFAVFIQHVPPGSFVAGLTV 185 Query 195 LTHTVDVVISMIKATLFGLMAGLIACYKGMSVGGGPAGVGRAVNETVVFAFIVLFVINIV 254 LTH DV +++ KA LFGL AGLIACYKG+SVGGGPAGVG AVNETVVF F+ LF IN++ Sbjct 186 LTHGADVAVALAKAALFGLSAGLIACYKGISVGGGPAGVGNAVNETVVFTFMALFAINVI 245 Query 255 VTAVGIPFMV 264 TAVG+ V Sbjct 246 ATAVGVKITV 255 >gi|108798492|ref|YP_638689.1| hypothetical protein Mmcs_1522 [Mycobacterium sp. MCS] gi|119867593|ref|YP_937545.1| hypothetical protein Mkms_1545 [Mycobacterium sp. KMS] gi|108768911|gb|ABG07633.1| protein of unknown function DUF140 [Mycobacterium sp. MCS] gi|119693682|gb|ABL90755.1| protein of unknown function DUF140 [Mycobacterium sp. KMS] Length=271 Score = 319 bits (817), Expect = 3e-85, Method: Compositional matrix adjust. Identities = 162/243 (67%), Positives = 194/243 (80%), Gaps = 0/243 (0%) Query 18 RPVGALGDFFAMTLDTSVCMFKPPFAWREYLLQCWFVARVSTLPGVLMTIPWAVISGFLF 77 +P+ ALG FFAM LDT V + + PFAWRE+L Q WFVARVS +P +++ IP+ V+ F F Sbjct 25 KPIRALGGFFAMALDTLVTIPRRPFAWREFLEQSWFVARVSLVPTLMLAIPFTVLLIFTF 84 Query 78 NVLLTDIGAADFSGTGCAIFTVNQSAPIVTVLVVAGAGATAMCADLGARTIREELDALRV 137 N+LL + GAADF+GTG A TV Q P+VTVLVVAGAGATAMCADLGARTIR+ELDALRV Sbjct 85 NILLLEFGAADFAGTGAAYGTVTQIGPVVTVLVVAGAGATAMCADLGARTIRDELDALRV 144 Query 138 MGINPIQALAAPRVLAATTVSLALNSVVTATGLIGAFFCSVFLMHVSAGAWVTGLTTLTH 197 MG++PIQ L PRVLAAT V+ L+SVV GL+G F SVF+ HV+ GA+++GLT +T Sbjct 145 MGVDPIQTLVVPRVLAATVVATLLSSVVILVGLVGGFAFSVFVQHVTPGAFISGLTVITS 204 Query 198 TVDVVISMIKATLFGLMAGLIACYKGMSVGGGPAGVGRAVNETVVFAFIVLFVINIVVTA 257 DVVIS+IKA LFGL AGLIACYKG+SVGGGPAGVG AVNETVVF F+ LF INI+ +A Sbjct 205 AADVVISLIKAALFGLAAGLIACYKGISVGGGPAGVGNAVNETVVFTFVALFAINIIASA 264 Query 258 VGI 260 VGI Sbjct 265 VGI 267 >gi|126436744|ref|YP_001072435.1| hypothetical protein Mjls_4172 [Mycobacterium sp. JLS] gi|126236544|gb|ABN99944.1| protein of unknown function DUF140 [Mycobacterium sp. JLS] Length=257 Score = 318 bits (815), Expect = 5e-85, Method: Compositional matrix adjust. Identities = 156/243 (65%), Positives = 195/243 (81%), Gaps = 0/243 (0%) Query 18 RPVGALGDFFAMTLDTSVCMFKPPFAWREYLLQCWFVARVSTLPGVLMTIPWAVISGFLF 77 +P+ ALG FFAM+LD V MF+PPFAWRE+LLQ WFVARV+ P +++ IP+ V++ F Sbjct 11 KPMRALGGFFAMSLDAFVQMFRPPFAWREFLLQTWFVARVALFPTIMLAIPFTVLTVFTI 70 Query 78 NVLLTDIGAADFSGTGCAIFTVNQSAPIVTVLVVAGAGATAMCADLGARTIREELDALRV 137 NVLL +IGAADFSGTG A+ V Q PIVTVLV+AGAGATAMCADLGARTIREE+DALRV Sbjct 71 NVLLVEIGAADFSGTGAALGAVTQIGPIVTVLVIAGAGATAMCADLGARTIREEIDALRV 130 Query 138 MGINPIQALAAPRVLAATTVSLALNSVVTATGLIGAFFCSVFLMHVSAGAWVTGLTTLTH 197 +GINPIQAL PR++AAT VSL L S+VT G++G+F SV+ +V+ GA+ GLT L Sbjct 131 LGINPIQALVVPRIVAATVVSLMLTSLVTMVGIVGSFIFSVYFQNVTPGAFAAGLTLLVG 190 Query 198 TVDVVISMIKATLFGLMAGLIACYKGMSVGGGPAGVGRAVNETVVFAFIVLFVINIVVTA 257 T +VV++++KA +FGL A LIACYKG+SVGGGP GVG AVNETVV+ F+ LFVIN++ TA Sbjct 191 TPEVVVNLLKAAIFGLAASLIACYKGISVGGGPQGVGNAVNETVVYTFMALFVINVIATA 250 Query 258 VGI 260 V + Sbjct 251 VAV 253 >gi|296171119|ref|ZP_06852572.1| integral membrane protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295894375|gb|EFG74128.1| integral membrane protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=256 Score = 307 bits (787), Expect = 8e-82, Method: Compositional matrix adjust. Identities = 159/246 (65%), Positives = 196/246 (80%), Gaps = 0/246 (0%) Query 13 ADPVLRPVGALGDFFAMTLDTSVCMFKPPFAWREYLLQCWFVARVSTLPGVLMTIPWAVI 72 ++ V RP+ + G+FFAM+LDT V MFK PF WRE+LLQ WFVARVS +P +L+TIP+ V+ Sbjct 5 SESVTRPLRSAGEFFAMSLDTFVAMFKLPFPWREFLLQTWFVARVSIIPTLLLTIPFTVL 64 Query 73 SGFLFNVLLTDIGAADFSGTGCAIFTVNQSAPIVTVLVVAGAGATAMCADLGARTIREEL 132 F N+LL + GAADFSGTG A +V Q P+VTVLVVAG GATAMCADLGAR I +EL Sbjct 65 VVFTMNILLVEFGAADFSGTGAATASVTQIGPVVTVLVVAGTGATAMCADLGARAIHDEL 124 Query 133 DALRVMGINPIQALAAPRVLAATTVSLALNSVVTATGLIGAFFCSVFLMHVSAGAWVTGL 192 DALRVMG++P++ LAAPRVLAAT V+++L S+VT GL G+FF SVF+ HV+ GA+ GL Sbjct 125 DALRVMGVDPVRRLAAPRVLAATVVAVSLVSLVTLVGLGGSFFFSVFIQHVTPGAFAAGL 184 Query 193 TTLTHTVDVVISMIKATLFGLMAGLIACYKGMSVGGGPAGVGRAVNETVVFAFIVLFVIN 252 T LTH D+V+ ++K LFG+ A LIACYKG+SVGGGP GVG AVNETVV++FI LFVIN Sbjct 185 TLLTHLPDLVLGLVKGALFGMAAALIACYKGISVGGGPQGVGNAVNETVVYSFIALFVIN 244 Query 253 IVVTAV 258 IV TAV Sbjct 245 IVATAV 250 >gi|240170711|ref|ZP_04749370.1| hypothetical protein MkanA1_15455 [Mycobacterium kansasii ATCC 12478] Length=255 Score = 305 bits (780), Expect = 6e-81, Method: Compositional matrix adjust. Identities = 157/246 (64%), Positives = 197/246 (81%), Gaps = 0/246 (0%) Query 13 ADPVLRPVGALGDFFAMTLDTSVCMFKPPFAWREYLLQCWFVARVSTLPGVLMTIPWAVI 72 +D V++P+ ++G+FFAM+LDT V MFK PF WRE+LLQ WFVARVS +P +L+ IP+ V+ Sbjct 4 SDTVIKPLRSVGEFFAMSLDTLVAMFKWPFPWREFLLQSWFVARVSIIPTLLLAIPFTVL 63 Query 73 SGFLFNVLLTDIGAADFSGTGCAIFTVNQSAPIVTVLVVAGAGATAMCADLGARTIREEL 132 F N+LL + GAADFSGTG A +V Q PIVTVLVVAG GATAMCADLGARTI +EL Sbjct 64 VVFTLNILLVEFGAADFSGTGAATASVTQIGPIVTVLVVAGTGATAMCADLGARTIHDEL 123 Query 133 DALRVMGINPIQALAAPRVLAATTVSLALNSVVTATGLIGAFFCSVFLMHVSAGAWVTGL 192 DALRVMG++PI+ LAAPRVLAAT V+++L S+VT GL G+F SVF+ HV+ GA+ GL Sbjct 124 DALRVMGVDPIRRLAAPRVLAATVVAVSLVSLVTLVGLAGSFAFSVFVQHVTPGAFAAGL 183 Query 193 TTLTHTVDVVISMIKATLFGLMAGLIACYKGMSVGGGPAGVGRAVNETVVFAFIVLFVIN 252 T +TH ++++ ++K LFG+ A LIACYKG+SVGGGP GVG AVNETVV++FI LFVIN Sbjct 184 TLITHLPELILGLVKGALFGMAAALIACYKGISVGGGPQGVGNAVNETVVYSFIALFVIN 243 Query 253 IVVTAV 258 IV TAV Sbjct 244 IVATAV 249 >gi|49072908|gb|AAT51759.1| TrnB1 [Mycobacterium vanbaalenii PYR-1] Length=269 Score = 304 bits (779), Expect = 7e-81, Method: Compositional matrix adjust. Identities = 149/243 (62%), Positives = 192/243 (80%), Gaps = 0/243 (0%) Query 17 LRPVGALGDFFAMTLDTSVCMFKPPFAWREYLLQCWFVARVSTLPGVLMTIPWAVISGFL 76 L+P+ +G +AMTLD V MFKPPF WRE+LLQ WFVARVS +P + ++IP V++ F Sbjct 22 LKPLSVIGGLYAMTLDMFVAMFKPPFQWREFLLQTWFVARVSMVPALTLSIPLVVLTSFT 81 Query 77 FNVLLTDIGAADFSGTGCAIFTVNQSAPIVTVLVVAGAGATAMCADLGARTIREELDALR 136 FN LL + GAADFSGTG A+ VNQ P VTVLVVAGAGA+AMCADLG+RTIREE+DA+R Sbjct 82 FNTLLGEFGAADFSGTGAALGAVNQIGPFVTVLVVAGAGASAMCADLGSRTIREEVDAMR 141 Query 137 VMGINPIQALAAPRVLAATTVSLALNSVVTATGLIGAFFCSVFLMHVSAGAWVTGLTTLT 196 V+G++PI +L PRVLA T V++ L+SVVT TGL+GAF SV+ HV+ G++V +T +T Sbjct 142 VLGLDPIHSLVVPRVLATTLVAVLLSSVVTVTGLLGAFLFSVYFQHVTPGSFVASMTLIT 201 Query 197 HTVDVVISMIKATLFGLMAGLIACYKGMSVGGGPAGVGRAVNETVVFAFIVLFVINIVVT 256 DV++S++KATLFG +AGLIACY+G+ V G AGVG AV+ETVV AF++LFV+N +VT Sbjct 202 GLGDVLVSLVKATLFGFVAGLIACYQGLRVQKGAAGVGNAVSETVVIAFLLLFVVNAIVT 261 Query 257 AVG 259 AVG Sbjct 262 AVG 264 >gi|120401520|ref|YP_951349.1| hypothetical protein Mvan_0498 [Mycobacterium vanbaalenii PYR-1] gi|119954338|gb|ABM11343.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii PYR-1] Length=269 Score = 304 bits (779), Expect = 8e-81, Method: Compositional matrix adjust. Identities = 149/243 (62%), Positives = 192/243 (80%), Gaps = 0/243 (0%) Query 17 LRPVGALGDFFAMTLDTSVCMFKPPFAWREYLLQCWFVARVSTLPGVLMTIPWAVISGFL 76 L+P+ +G +AMTLD V MFKPPF WRE+LLQ WFVARVS +P + ++IP V++ F Sbjct 22 LKPLSIIGGLYAMTLDMFVAMFKPPFQWREFLLQTWFVARVSMVPALTLSIPLVVLTSFT 81 Query 77 FNVLLTDIGAADFSGTGCAIFTVNQSAPIVTVLVVAGAGATAMCADLGARTIREELDALR 136 FN LL + GAADFSGTG A+ VNQ P VTVLVVAGAGA+AMCADLG+RTIREE+DA+R Sbjct 82 FNTLLGEFGAADFSGTGAALGAVNQIGPFVTVLVVAGAGASAMCADLGSRTIREEVDAMR 141 Query 137 VMGINPIQALAAPRVLAATTVSLALNSVVTATGLIGAFFCSVFLMHVSAGAWVTGLTTLT 196 V+G++PI +L PRVLA T V++ L+SVVT TGL+GAF SV+ HV+ G++V +T +T Sbjct 142 VLGLDPIHSLVVPRVLATTLVAVLLSSVVTVTGLLGAFLFSVYFQHVTPGSFVASMTLIT 201 Query 197 HTVDVVISMIKATLFGLMAGLIACYKGMSVGGGPAGVGRAVNETVVFAFIVLFVINIVVT 256 DV++S++KATLFG +AGLIACY+G+ V G AGVG AV+ETVV AF++LFV+N +VT Sbjct 202 GLGDVLVSLVKATLFGFVAGLIACYQGLRVQKGAAGVGNAVSETVVIAFLLLFVVNAIVT 261 Query 257 AVG 259 AVG Sbjct 262 AVG 264 >gi|108798619|ref|YP_638816.1| hypothetical protein Mmcs_1650 [Mycobacterium sp. MCS] gi|119867717|ref|YP_937669.1| hypothetical protein Mkms_1676 [Mycobacterium sp. KMS] gi|126434218|ref|YP_001069909.1| hypothetical protein Mjls_1625 [Mycobacterium sp. JLS] gi|108769038|gb|ABG07760.1| protein of unknown function DUF140 [Mycobacterium sp. MCS] gi|119693806|gb|ABL90879.1| protein of unknown function DUF140 [Mycobacterium sp. KMS] gi|126234018|gb|ABN97418.1| protein of unknown function DUF140 [Mycobacterium sp. JLS] Length=266 Score = 304 bits (778), Expect = 9e-81, Method: Compositional matrix adjust. Identities = 149/243 (62%), Positives = 192/243 (80%), Gaps = 0/243 (0%) Query 17 LRPVGALGDFFAMTLDTSVCMFKPPFAWREYLLQCWFVARVSTLPGVLMTIPWAVISGFL 76 L+P+ +G +AMTLD V MFKPPF WRE+LLQ WFVARVS +P + ++IP V++ F Sbjct 19 LKPLSIIGGLYAMTLDMFVAMFKPPFQWREFLLQTWFVARVSMVPALTLSIPLVVLTSFT 78 Query 77 FNVLLTDIGAADFSGTGCAIFTVNQSAPIVTVLVVAGAGATAMCADLGARTIREELDALR 136 FN LL + GAADFSGTG A+ VNQ P VTVLVVAGAGA+AMCADLG+RTIREE+DA+R Sbjct 79 FNTLLGEFGAADFSGTGAALGAVNQIGPFVTVLVVAGAGASAMCADLGSRTIREEVDAMR 138 Query 137 VMGINPIQALAAPRVLAATTVSLALNSVVTATGLIGAFFCSVFLMHVSAGAWVTGLTTLT 196 V+G++PI +L PRVLA T V++ L+SVVT TGL+GAF SV+ HV+ G++V +T +T Sbjct 139 VLGLDPIHSLVVPRVLATTLVAVLLSSVVTVTGLLGAFLFSVYFQHVTPGSFVASMTLIT 198 Query 197 HTVDVVISMIKATLFGLMAGLIACYKGMSVGGGPAGVGRAVNETVVFAFIVLFVINIVVT 256 DV++S++KATLFG +AGLIACY+G+ V G AGVG AV+ETVV AF++LFV+N +VT Sbjct 199 GLGDVLVSLVKATLFGFVAGLIACYQGLRVQKGAAGVGNAVSETVVIAFLLLFVVNAIVT 258 Query 257 AVG 259 AVG Sbjct 259 AVG 261 >gi|145221253|ref|YP_001131931.1| hypothetical protein Mflv_0654 [Mycobacterium gilvum PYR-GCK] gi|315441852|ref|YP_004074731.1| ABC transporter involved in resistance to organic solvents, permease [Mycobacterium sp. Spyr1] gi|145213739|gb|ABP43143.1| protein of unknown function DUF140 [Mycobacterium gilvum PYR-GCK] gi|315260155|gb|ADT96896.1| ABC-type transport system involved in resistance to organic solvents, permease component [Mycobacterium sp. Spyr1] Length=269 Score = 301 bits (771), Expect = 7e-80, Method: Compositional matrix adjust. Identities = 148/243 (61%), Positives = 191/243 (79%), Gaps = 0/243 (0%) Query 17 LRPVGALGDFFAMTLDTSVCMFKPPFAWREYLLQCWFVARVSTLPGVLMTIPWAVISGFL 76 L+P+ +G +AMTLD V M KPPF WRE+LLQ WFVARVS +P + ++IP V++ F Sbjct 22 LKPLSIIGGLYAMTLDMFVAMVKPPFQWREFLLQTWFVARVSMVPALTLSIPLVVLTSFT 81 Query 77 FNVLLTDIGAADFSGTGCAIFTVNQSAPIVTVLVVAGAGATAMCADLGARTIREELDALR 136 FN LL + GAADFSGTG A+ VNQ P VTVLVVAGAGA+AMCADLG+RTIREE+DA+R Sbjct 82 FNTLLGEFGAADFSGTGAALGAVNQIGPFVTVLVVAGAGASAMCADLGSRTIREEVDAMR 141 Query 137 VMGINPIQALAAPRVLAATTVSLALNSVVTATGLIGAFFCSVFLMHVSAGAWVTGLTTLT 196 V+G++PI +L PRVLA T V++ L+SVVT TGL+GAF SV+ HV+ G++V +T +T Sbjct 142 VLGLDPIHSLVVPRVLATTLVAVLLSSVVTVTGLLGAFLFSVYFQHVTPGSFVASMTLIT 201 Query 197 HTVDVVISMIKATLFGLMAGLIACYKGMSVGGGPAGVGRAVNETVVFAFIVLFVINIVVT 256 DV++S++KATLFG +AGLIACY+G+ V G AGVG AV+ETVV AF++LFV+N +VT Sbjct 202 GLGDVLVSLVKATLFGFVAGLIACYQGLRVQKGAAGVGNAVSETVVIAFLLLFVVNAIVT 261 Query 257 AVG 259 AVG Sbjct 262 AVG 264 >gi|126436762|ref|YP_001072453.1| hypothetical protein Mjls_4190 [Mycobacterium sp. JLS] gi|126236562|gb|ABN99962.1| protein of unknown function DUF140 [Mycobacterium sp. JLS] Length=255 Score = 299 bits (765), Expect = 3e-79, Method: Compositional matrix adjust. Identities = 151/243 (63%), Positives = 195/243 (81%), Gaps = 0/243 (0%) Query 18 RPVGALGDFFAMTLDTSVCMFKPPFAWREYLLQCWFVARVSTLPGVLMTIPWAVISGFLF 77 +PV ALGDFFA+ DT + + + PFA RE++LQ WFVARVS +P ++++IP+ V++ F Sbjct 9 KPVRALGDFFALAADTMMLIPRRPFAGREFILQTWFVARVSLVPTLMLSIPFTVLTVFTL 68 Query 78 NVLLTDIGAADFSGTGCAIFTVNQSAPIVTVLVVAGAGATAMCADLGARTIREELDALRV 137 NVLL + GA DFSG+G A+ V Q P+V+VLVVAGAGATAMCADLG+RTIREELDALRV Sbjct 69 NVLLLEFGAGDFSGSGAALAAVTQIGPLVSVLVVAGAGATAMCADLGSRTIREELDALRV 128 Query 138 MGINPIQALAAPRVLAATTVSLALNSVVTATGLIGAFFCSVFLMHVSAGAWVTGLTTLTH 197 +GINP+QAL PRVLAAT VSL L+ VV TGL+G F SVF+ +V+ G++V G+T LT Sbjct 129 LGINPVQALVVPRVLAATLVSLLLSGVVIVTGLVGGFGFSVFVQNVTPGSFVAGITLLTG 188 Query 198 TVDVVISMIKATLFGLMAGLIACYKGMSVGGGPAGVGRAVNETVVFAFIVLFVINIVVTA 257 ++ I+++KA LFGL A L+ACYKG+SVGGGPA VG AVNETVV++F+ LFVI+++VTA Sbjct 189 APELGIALVKAGLFGLTASLLACYKGISVGGGPAAVGNAVNETVVYSFVSLFVIDVIVTA 248 Query 258 VGI 260 VGI Sbjct 249 VGI 251 >gi|120405354|ref|YP_955183.1| hypothetical protein Mvan_4401 [Mycobacterium vanbaalenii PYR-1] gi|119958172|gb|ABM15177.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii PYR-1] Length=250 Score = 296 bits (759), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 153/244 (63%), Positives = 190/244 (78%), Gaps = 0/244 (0%) Query 18 RPVGALGDFFAMTLDTSVCMFKPPFAWREYLLQCWFVARVSTLPGVLMTIPWAVISGFLF 77 R + LG FAM++DT V + + PFAW+E+L Q WFVARVS LP +L+ IP++V+ F F Sbjct 4 RSLQGLGGLFAMSVDTMVLLSRRPFAWQEFLRQSWFVARVSLLPTLLLAIPFSVLLVFTF 63 Query 78 NVLLTDIGAADFSGTGCAIFTVNQSAPIVTVLVVAGAGATAMCADLGARTIREELDALRV 137 N+LLT+ GAADFSGTG A V Q PIVTVLVVAGAGATAMCADLGARTIR+E+DA+RV Sbjct 64 NILLTEFGAADFSGTGAAYGAVTQIGPIVTVLVVAGAGATAMCADLGARTIRDEIDAMRV 123 Query 138 MGINPIQALAAPRVLAATTVSLALNSVVTATGLIGAFFCSVFLMHVSAGAWVTGLTTLTH 197 MGINP+QAL PRVLAA+ V++ L+S V L+G++ VF+ +V+ GA+ G+T LT Sbjct 124 MGINPLQALVLPRVLAASFVAVMLSSAVILVSLVGSYVFGVFIQNVTPGAFAAGMTLLTG 183 Query 198 TVDVVISMIKATLFGLMAGLIACYKGMSVGGGPAGVGRAVNETVVFAFIVLFVINIVVTA 257 DVV+++IKA +FGL AGLIACYKG+SVGGGPAGVG AVNETVVF F+ LF INIV +A Sbjct 184 VGDVVVALIKAAMFGLCAGLIACYKGLSVGGGPAGVGLAVNETVVFTFMALFGINIVTSA 243 Query 258 VGIP 261 V I Sbjct 244 VAIE 247 >gi|254820119|ref|ZP_05225120.1| hypothetical protein MintA_09341 [Mycobacterium intracellulare ATCC 13950] Length=256 Score = 296 bits (758), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 153/243 (63%), Positives = 192/243 (80%), Gaps = 0/243 (0%) Query 18 RPVGALGDFFAMTLDTSVCMFKPPFAWREYLLQCWFVARVSTLPGVLMTIPWAVISGFLF 77 +PV ++GDFFA+ LDT + + + PFA RE+LLQ WFVARVS P ++++IP+ V++ F Sbjct 10 KPVRSVGDFFALALDTLLQIPRRPFAGREFLLQSWFVARVSIAPTMMLSIPFTVLTVFTI 69 Query 78 NVLLTDIGAADFSGTGCAIFTVNQSAPIVTVLVVAGAGATAMCADLGARTIREELDALRV 137 N+LL + GA DFSG+G A+ TV Q P+VTVLVVAGAGATAMCADLGARTIREELDALRV Sbjct 70 NILLIEFGAGDFSGSGAALATVTQIGPLVTVLVVAGAGATAMCADLGARTIREELDALRV 129 Query 138 MGINPIQALAAPRVLAATTVSLALNSVVTATGLIGAFFCSVFLMHVSAGAWVTGLTTLTH 197 +GINPI +L PRVLAAT VSL L+ VV TGL+G F SVF+ HV+ G++ GLT LT Sbjct 130 LGINPIGSLVVPRVLAATFVSLLLSGVVIVTGLVGGFEFSVFVQHVTPGSFAAGLTLLTG 189 Query 198 TVDVVISMIKATLFGLMAGLIACYKGMSVGGGPAGVGRAVNETVVFAFIVLFVINIVVTA 257 ++VI+++KA LFGL A LIACYKG+SVG G A VG AVNETVVF+F+ LF I++VVTA Sbjct 190 ARELVIALVKAGLFGLTASLIACYKGISVGRGAAAVGNAVNETVVFSFMSLFFIDVVVTA 249 Query 258 VGI 260 VG+ Sbjct 250 VGV 252 >gi|342857630|ref|ZP_08714286.1| integral membrane protein YrbE3A_1 [Mycobacterium colombiense CECT 3035] gi|342134963|gb|EGT88129.1| integral membrane protein YrbE3A_1 [Mycobacterium colombiense CECT 3035] Length=237 Score = 291 bits (746), Expect = 5e-77, Method: Compositional matrix adjust. Identities = 155/237 (66%), Positives = 188/237 (80%), Gaps = 0/237 (0%) Query 29 MTLDTSVCMFKPPFAWREYLLQCWFVARVSTLPGVLMTIPWAVISGFLFNVLLTDIGAAD 88 M+LDT V +F+ PFA RE+L Q WFVARVS LP +L++IP+ + F+ NVLL +IGAAD Sbjct 1 MSLDTFVAVFRRPFALREFLTQTWFVARVSLLPTMLLSIPFTTLVVFVLNVLLVEIGAAD 60 Query 89 FSGTGCAIFTVNQSAPIVTVLVVAGAGATAMCADLGARTIREELDALRVMGINPIQALAA 148 +SG+G A+ TVNQ PIVTVLVVAGAGATAMCADLGARTIREELDA+RVMGI+PIQAL Sbjct 61 YSGSGAALGTVNQIGPIVTVLVVAGAGATAMCADLGARTIREELDAMRVMGIDPIQALVV 120 Query 149 PRVLAATTVSLALNSVVTATGLIGAFFCSVFLMHVSAGAWVTGLTTLTHTVDVVISMIKA 208 PRVLA T V+L L+++VT GL G+F SVF+ HV+ GAWV GLT + DV+I+M+KA Sbjct 121 PRVLAGTLVALMLSALVTLVGLTGSFGFSVFIQHVTPGAWVAGLTLIVGLADVIIAMVKA 180 Query 209 TLFGLMAGLIACYKGMSVGGGPAGVGRAVNETVVFAFIVLFVINIVVTAVGIPFMVS 265 TLFGL A LIACYKG +V GGPAGVG AVNETVV+ F+ LF I++V TAVG+ V Sbjct 181 TLFGLAASLIACYKGTTVAGGPAGVGNAVNETVVYTFMALFAIDVVATAVGVKVSVK 237 >gi|15610637|ref|NP_218018.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis H37Rv] gi|31794677|ref|NP_857170.1| integral membrane protein YrbE4a [Mycobacterium bovis AF2122/97] gi|121639420|ref|YP_979644.1| integral membrane protein YrbE4a [Mycobacterium bovis BCG str. Pasteur 1173P2] 79 more sequence titles Length=254 Score = 287 bits (735), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 143/242 (60%), Positives = 187/242 (78%), Gaps = 0/242 (0%) Query 19 PVGALGDFFAMTLDTSVCMFKPPFAWREYLLQCWFVARVSTLPGVLMTIPWAVISGFLFN 78 P A+G FF M++DT+ F+ PF +RE+L Q W VARVS +P +L++IP+ V+ F N Sbjct 8 PARAVGGFFEMSMDTARAAFRRPFQFREFLDQTWMVARVSLVPTLLVSIPFTVLVAFTLN 67 Query 79 VLLTDIGAADFSGTGCAIFTVNQSAPIVTVLVVAGAGATAMCADLGARTIREELDALRVM 138 +LL +IGAAD SG G A T+ Q P+VTVLVVAGAGATA+CADLGARTIREE+DA+RV+ Sbjct 68 ILLREIGAADLSGAGTAFGTITQLGPVVTVLVVAGAGATAICADLGARTIREEIDAMRVL 127 Query 139 GINPIQALAAPRVLAATTVSLALNSVVTATGLIGAFFCSVFLMHVSAGAWVTGLTTLTHT 198 GI+PIQ L PRVLA+T V+L LN +V A GL G + SVFL V+ GA++ GLT LT Sbjct 128 GIDPIQRLVVPRVLASTLVALLLNGLVCAIGLSGGYAFSVFLQGVNPGAFINGLTVLTGL 187 Query 199 VDVVISMIKATLFGLMAGLIACYKGMSVGGGPAGVGRAVNETVVFAFIVLFVINIVVTAV 258 +++++ IKA LFG+MAGL+ CY+G++V GGP GVG AVNETVV+AFI LFVIN+V+TA+ Sbjct 188 RELILAEIKALLFGVMAGLVGCYRGLTVKGGPKGVGNAVNETVVYAFICLFVINVVMTAI 247 Query 259 GI 260 G+ Sbjct 248 GV 249 >gi|118619254|ref|YP_907586.1| membrane protein YrbE4A [Mycobacterium ulcerans Agy99] gi|118571364|gb|ABL06115.1| conserved membrane protein YrbE4A [Mycobacterium ulcerans Agy99] Length=279 Score = 287 bits (734), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 143/242 (60%), Positives = 187/242 (78%), Gaps = 0/242 (0%) Query 19 PVGALGDFFAMTLDTSVCMFKPPFAWREYLLQCWFVARVSTLPGVLMTIPWAVISGFLFN 78 P A+G FF M++DT+ F+ PF +RE+L Q W VARVS +P +L++IP+ V+ F N Sbjct 33 PARAVGGFFEMSIDTARAAFRRPFQFREFLDQTWMVARVSLVPTLLVSIPFTVLVAFTLN 92 Query 79 VLLTDIGAADFSGTGCAIFTVNQSAPIVTVLVVAGAGATAMCADLGARTIREELDALRVM 138 +LL +IGAAD SG G A T+ Q P+VTVLVVAGAGATA+CADLGARTIREE+DA+RV+ Sbjct 93 ILLREIGAADLSGAGTAFGTITQLGPVVTVLVVAGAGATAICADLGARTIREEIDAMRVL 152 Query 139 GINPIQALAAPRVLAATTVSLALNSVVTATGLIGAFFCSVFLMHVSAGAWVTGLTTLTHT 198 GI+PIQ L PRVLA+T V+L LN +V A GL G + SVFL V+ GA++ GLT LT Sbjct 153 GIDPIQRLVVPRVLASTVVALLLNGLVCAIGLSGGYAFSVFLQGVNPGAFINGLTVLTGL 212 Query 199 VDVVISMIKATLFGLMAGLIACYKGMSVGGGPAGVGRAVNETVVFAFIVLFVINIVVTAV 258 +++++ IKA LFG+MAGL+ CY+G++V GGP GVG AVNETVV+AFI LFVIN+V+TA+ Sbjct 213 RELILAEIKALLFGVMAGLVGCYRGLTVKGGPKGVGNAVNETVVYAFICLFVINVVMTAI 272 Query 259 GI 260 G+ Sbjct 273 GV 274 >gi|342857466|ref|ZP_08714122.1| TrnB1 protein [Mycobacterium colombiense CECT 3035] gi|342134799|gb|EGT87965.1| TrnB1 protein [Mycobacterium colombiense CECT 3035] Length=246 Score = 285 bits (729), Expect = 5e-75, Method: Compositional matrix adjust. Identities = 141/239 (59%), Positives = 184/239 (77%), Gaps = 0/239 (0%) Query 22 ALGDFFAMTLDTSVCMFKPPFAWREYLLQCWFVARVSTLPGVLMTIPWAVISGFLFNVLL 81 ALG FF ++ + V + P+AWRE L Q WFVARVS P ++++IP+ V+ F+ N+LL Sbjct 3 ALGQFFLLSAEALVAAVRGPWAWREVLEQIWFVARVSIFPTIMLSIPYTVLIVFVLNILL 62 Query 82 TDIGAADFSGTGCAIFTVNQSAPIVTVLVVAGAGATAMCADLGARTIREELDALRVMGIN 141 +IGA D SG G + +V Q P+VT +VV+GAG+TAMCADLGARTIREE+DA++V+G+N Sbjct 63 VEIGAGDLSGAGAGLASVTQVGPVVTAMVVSGAGSTAMCADLGARTIREEIDAMKVIGVN 122 Query 142 PIQALAAPRVLAATTVSLALNSVVTATGLIGAFFCSVFLMHVSAGAWVTGLTTLTHTVDV 201 PIQAL PR++AAT V++ L SVV TGL G++ VF+ HV+ GA+V G+T +T V Sbjct 123 PIQALVVPRIIAATFVAVLLYSVVAVTGLTGSYIFVVFVQHVTPGAFVAGMTLVTGLPQV 182 Query 202 VISMIKATLFGLMAGLIACYKGMSVGGGPAGVGRAVNETVVFAFIVLFVINIVVTAVGI 260 VIS+IKATLFGL AGLIACYKG+SVGGGP GVG AVNETVVF+F+ LF INI+ TA+G+ Sbjct 183 VISLIKATLFGLSAGLIACYKGLSVGGGPTGVGNAVNETVVFSFMALFFINILTTALGV 241 >gi|240170056|ref|ZP_04748715.1| membrane protein YrbE4A [Mycobacterium kansasii ATCC 12478] Length=254 Score = 284 bits (727), Expect = 9e-75, Method: Compositional matrix adjust. Identities = 141/242 (59%), Positives = 185/242 (77%), Gaps = 0/242 (0%) Query 19 PVGALGDFFAMTLDTSVCMFKPPFAWREYLLQCWFVARVSTLPGVLMTIPWAVISGFLFN 78 P A+G FF M++DT + PF +RE+L Q W VARVS +P +L++IP+ V+ F N Sbjct 8 PARAVGGFFEMSIDTGRAALRRPFQFREFLDQTWMVARVSLVPTLLVSIPFTVLVAFTLN 67 Query 79 VLLTDIGAADFSGTGCAIFTVNQSAPIVTVLVVAGAGATAMCADLGARTIREELDALRVM 138 +LL +IGAAD SG G A T+ Q P+VTVLVVAGAGATA+CADLGARTIREE+DA+RV+ Sbjct 68 ILLREIGAADLSGAGTAFGTITQLGPVVTVLVVAGAGATAICADLGARTIREEIDAMRVL 127 Query 139 GINPIQALAAPRVLAATTVSLALNSVVTATGLIGAFFCSVFLMHVSAGAWVTGLTTLTHT 198 GI+PIQ L PRVLA+T V+L LN +V A GL G + SVFL V+ GA++ GLT LT Sbjct 128 GIDPIQRLVVPRVLASTLVALLLNGLVCAIGLSGGYVFSVFLQGVNPGAFINGLTVLTGL 187 Query 199 VDVVISMIKATLFGLMAGLIACYKGMSVGGGPAGVGRAVNETVVFAFIVLFVINIVVTAV 258 +++++ +KA LFG+MAGL+ CY+G++V GGP GVG AVNETVV+AFI LFVIN+V+TA+ Sbjct 188 RELILAEVKALLFGVMAGLVGCYRGLTVKGGPKGVGNAVNETVVYAFICLFVINVVMTAI 247 Query 259 GI 260 G+ Sbjct 248 GV 249 >gi|118466063|ref|YP_881276.1| TrnB1 protein [Mycobacterium avium 104] gi|254774784|ref|ZP_05216300.1| TrnB1 protein [Mycobacterium avium subsp. avium ATCC 25291] gi|118167350|gb|ABK68247.1| TrnB1 protein [Mycobacterium avium 104] Length=255 Score = 284 bits (726), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 140/248 (57%), Positives = 188/248 (76%), Gaps = 0/248 (0%) Query 13 ADPVLRPVGALGDFFAMTLDTSVCMFKPPFAWREYLLQCWFVARVSTLPGVLMTIPWAVI 72 A + +P+ ALG FF ++ + + P+AWRE L Q WFVARVS P ++++IP+ V+ Sbjct 3 ATAIAKPMTALGQFFLLSAEALAAAVRGPWAWREILEQIWFVARVSIFPTIMLSIPYTVL 62 Query 73 SGFLFNVLLTDIGAADFSGTGCAIFTVNQSAPIVTVLVVAGAGATAMCADLGARTIREEL 132 F+ N+LL +IGA D SG G + +V Q P+VT +VV+GAG+TAMCADLGARTIREE+ Sbjct 63 IVFVLNILLVEIGAGDLSGAGAGLASVTQVGPVVTAMVVSGAGSTAMCADLGARTIREEI 122 Query 133 DALRVMGINPIQALAAPRVLAATTVSLALNSVVTATGLIGAFFCSVFLMHVSAGAWVTGL 192 DA++V+G+NP+QAL PR++AAT V++ L +VV TGL G++ VF+ HV+ GA+V G+ Sbjct 123 DAMKVIGVNPVQALVVPRIIAATFVAVMLYAVVAVTGLTGSYIFVVFVQHVTPGAFVAGM 182 Query 193 TTLTHTVDVVISMIKATLFGLMAGLIACYKGMSVGGGPAGVGRAVNETVVFAFIVLFVIN 252 T +T VVIS+IKATLFGL AGLIACYKG+SVGGGP GVG AVNETVVF+F+ LF IN Sbjct 183 TLVTGLPQVVISLIKATLFGLSAGLIACYKGLSVGGGPTGVGNAVNETVVFSFMALFFIN 242 Query 253 IVVTAVGI 260 I+ TA+G+ Sbjct 243 ILTTALGV 250 >gi|126437566|ref|YP_001073257.1| hypothetical protein Mjls_5002 [Mycobacterium sp. JLS] gi|126237366|gb|ABO00767.1| protein of unknown function DUF140 [Mycobacterium sp. JLS] Length=254 Score = 283 bits (723), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 144/247 (59%), Positives = 188/247 (77%), Gaps = 0/247 (0%) Query 19 PVGALGDFFAMTLDTSVCMFKPPFAWREYLLQCWFVARVSTLPGVLMTIPWAVISGFLFN 78 P A+G F M++DT V MF+ PF +RE+L Q W +ARVS +P +L+ IP+ V+ F N Sbjct 8 PARAVGGFVDMSIDTFVKMFRRPFQFREFLDQTWMIARVSLIPTLLVAIPFTVLVAFTLN 67 Query 79 VLLTDIGAADFSGTGCAIFTVNQSAPIVTVLVVAGAGATAMCADLGARTIREELDALRVM 138 +LL +IGAAD SG G A T+ Q P+VTVLVVAGAGATA+CADLGARTIREE+DA+RV+ Sbjct 68 ILLREIGAADLSGAGTAFGTITQLGPVVTVLVVAGAGATAICADLGARTIREEIDAMRVL 127 Query 139 GINPIQALAAPRVLAATTVSLALNSVVTATGLIGAFFCSVFLMHVSAGAWVTGLTTLTHT 198 GI+PIQ L PRVLA+T V+L LN +V A GL G + SVFL V+ GA++ GLT LT Sbjct 128 GIDPIQRLVVPRVLASTFVALLLNGLVCAIGLAGGYVFSVFLQGVNPGAFINGLTVLTGL 187 Query 199 VDVVISMIKATLFGLMAGLIACYKGMSVGGGPAGVGRAVNETVVFAFIVLFVINIVVTAV 258 ++V++ IKA LFG++AGL+ CY+G++V GGP GVG AVNETVV+AFI LFVIN+++TAV Sbjct 188 GELVLAEIKALLFGVVAGLVGCYRGLTVQGGPKGVGIAVNETVVYAFICLFVINVIMTAV 247 Query 259 GIPFMVS 265 G+ +V Sbjct 248 GVRVLVR 254 >gi|342862240|ref|ZP_08718882.1| hypothetical protein MCOL_25241 [Mycobacterium colombiense CECT 3035] gi|342130318|gb|EGT83638.1| hypothetical protein MCOL_25241 [Mycobacterium colombiense CECT 3035] Length=254 Score = 282 bits (722), Expect = 3e-74, Method: Compositional matrix adjust. Identities = 141/242 (59%), Positives = 184/242 (77%), Gaps = 0/242 (0%) Query 19 PVGALGDFFAMTLDTSVCMFKPPFAWREYLLQCWFVARVSTLPGVLMTIPWAVISGFLFN 78 P A+G FF M LDT F+ PF + E+L Q W +ARVS +P +L++IP+ V+ F N Sbjct 8 PARAVGGFFEMMLDTGRAAFRRPFQFGEFLDQTWMIARVSLVPTLLVSIPFTVLVAFTLN 67 Query 79 VLLTDIGAADFSGTGCAIFTVNQSAPIVTVLVVAGAGATAMCADLGARTIREELDALRVM 138 +LL +IGAAD SG G A T+ Q P+VTVLVVAGAGATA+CADLGARTIREE+DA+RV+ Sbjct 68 ILLREIGAADLSGAGTAFGTITQLGPVVTVLVVAGAGATAICADLGARTIREEIDAMRVL 127 Query 139 GINPIQALAAPRVLAATTVSLALNSVVTATGLIGAFFCSVFLMHVSAGAWVTGLTTLTHT 198 GI+PIQ L PRVLA+T V+L LN +V A GL G + SVFL V+ GA++ GLT LT Sbjct 128 GIDPIQRLVVPRVLASTVVALLLNGLVCAIGLSGGYVFSVFLQGVNPGAFINGLTVLTGL 187 Query 199 VDVVISMIKATLFGLMAGLIACYKGMSVGGGPAGVGRAVNETVVFAFIVLFVINIVVTAV 258 ++V++ +KA LFG+MAG++ CY+G++V GGP GVG AVNETVV+AFI LFVIN+V+TA+ Sbjct 188 RELVLAEVKALLFGVMAGMVGCYRGLTVKGGPKGVGNAVNETVVYAFICLFVINVVMTAI 247 Query 259 GI 260 G+ Sbjct 248 GV 249 >gi|41408215|ref|NP_961051.1| hypothetical protein MAP2117c [Mycobacterium avium subsp. paratuberculosis K-10] gi|41396570|gb|AAS04434.1| hypothetical protein MAP_2117c [Mycobacterium avium subsp. paratuberculosis K-10] Length=255 Score = 281 bits (720), Expect = 5e-74, Method: Compositional matrix adjust. Identities = 139/248 (57%), Positives = 187/248 (76%), Gaps = 0/248 (0%) Query 13 ADPVLRPVGALGDFFAMTLDTSVCMFKPPFAWREYLLQCWFVARVSTLPGVLMTIPWAVI 72 A + +P+ ALG FF ++ + + P+AWRE L Q WFVARVS P ++++IP+ V+ Sbjct 3 ATAIAKPMTALGQFFLLSAEALAAAVRGPWAWREILEQIWFVARVSIFPTIMLSIPYTVL 62 Query 73 SGFLFNVLLTDIGAADFSGTGCAIFTVNQSAPIVTVLVVAGAGATAMCADLGARTIREEL 132 F+ N+LL +IGA D SG G + +V Q P+VT +VV+GAG+TAMCADLGARTIREE+ Sbjct 63 IVFVLNILLVEIGAGDLSGAGAGLASVTQVGPVVTAMVVSGAGSTAMCADLGARTIREEI 122 Query 133 DALRVMGINPIQALAAPRVLAATTVSLALNSVVTATGLIGAFFCSVFLMHVSAGAWVTGL 192 DA++V+G+NP+QAL PR++AAT V++ L +VV GL G++ VF+ HV+ GA+V G+ Sbjct 123 DAMKVIGVNPVQALVVPRIIAATFVAVMLYAVVAVIGLTGSYIFVVFVQHVTPGAFVAGM 182 Query 193 TTLTHTVDVVISMIKATLFGLMAGLIACYKGMSVGGGPAGVGRAVNETVVFAFIVLFVIN 252 T +T VVIS+IKATLFGL AGLIACYKG+SVGGGP GVG AVNETVVF+F+ LF IN Sbjct 183 TLVTGLPQVVISLIKATLFGLSAGLIACYKGLSVGGGPTGVGNAVNETVVFSFMALFFIN 242 Query 253 IVVTAVGI 260 I+ TA+G+ Sbjct 243 ILTTALGV 250 >gi|108801582|ref|YP_641779.1| hypothetical protein Mmcs_4619 [Mycobacterium sp. MCS] gi|119870736|ref|YP_940688.1| hypothetical protein Mkms_4707 [Mycobacterium sp. KMS] gi|108772001|gb|ABG10723.1| protein of unknown function DUF140 [Mycobacterium sp. MCS] gi|119696825|gb|ABL93898.1| protein of unknown function DUF140 [Mycobacterium sp. KMS] Length=254 Score = 281 bits (719), Expect = 8e-74, Method: Compositional matrix adjust. Identities = 143/247 (58%), Positives = 187/247 (76%), Gaps = 0/247 (0%) Query 19 PVGALGDFFAMTLDTSVCMFKPPFAWREYLLQCWFVARVSTLPGVLMTIPWAVISGFLFN 78 P A+G F M++DT V F+ PF +RE+L Q W +ARVS +P +L+ IP+ V+ F N Sbjct 8 PARAVGGFVEMSIDTFVKTFRRPFQFREFLDQTWMIARVSLIPTLLVAIPFTVLVAFTLN 67 Query 79 VLLTDIGAADFSGTGCAIFTVNQSAPIVTVLVVAGAGATAMCADLGARTIREELDALRVM 138 +LL +IGAAD SG G A T+ Q P+VTVLVVAGAGATA+CADLGARTIREE+DA+RV+ Sbjct 68 ILLREIGAADLSGAGTAFGTITQLGPVVTVLVVAGAGATAICADLGARTIREEIDAMRVL 127 Query 139 GINPIQALAAPRVLAATTVSLALNSVVTATGLIGAFFCSVFLMHVSAGAWVTGLTTLTHT 198 GI+PIQ L PRVLA+T V+L LN +V A GL G + SVFL V+ GA++ GLT LT Sbjct 128 GIDPIQRLVVPRVLASTFVALLLNGLVCAIGLAGGYVFSVFLQGVNPGAFINGLTVLTGL 187 Query 199 VDVVISMIKATLFGLMAGLIACYKGMSVGGGPAGVGRAVNETVVFAFIVLFVINIVVTAV 258 ++V++ IKA LFG++AGL+ CY+G++V GGP GVG AVNETVV+AFI LFVIN+++TAV Sbjct 188 GELVLAEIKALLFGVVAGLVGCYRGLTVQGGPKGVGIAVNETVVYAFICLFVINVIMTAV 247 Query 259 GIPFMVS 265 G+ +V Sbjct 248 GVRVLVR 254 >gi|296166535|ref|ZP_06848966.1| membrane protein YrbE4A [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295898147|gb|EFG77722.1| membrane protein YrbE4A [Mycobacterium parascrofulaceum ATCC BAA-614] Length=254 Score = 279 bits (714), Expect = 3e-73, Method: Compositional matrix adjust. Identities = 139/242 (58%), Positives = 182/242 (76%), Gaps = 0/242 (0%) Query 19 PVGALGDFFAMTLDTSVCMFKPPFAWREYLLQCWFVARVSTLPGVLMTIPWAVISGFLFN 78 P A+G FF M +DT F+ PF E+L Q W +ARVS +P +L++IP+ V+ F N Sbjct 8 PARAVGGFFEMMIDTGRATFRRPFQLGEFLEQTWMIARVSLVPTLLVSIPFTVLVAFTLN 67 Query 79 VLLTDIGAADFSGTGCAIFTVNQSAPIVTVLVVAGAGATAMCADLGARTIREELDALRVM 138 +LL +IGAAD SG G A T+ Q P+VTVLVVAGAGATA+CADLGARTIREE+DA+RV+ Sbjct 68 ILLREIGAADLSGAGTAFGTITQLGPVVTVLVVAGAGATAICADLGARTIREEIDAMRVL 127 Query 139 GINPIQALAAPRVLAATTVSLALNSVVTATGLIGAFFCSVFLMHVSAGAWVTGLTTLTHT 198 GI+P+ L PRVLA+T V+L LN +V A GL G + SVFL V+ GA++ GLT LT Sbjct 128 GIDPVHRLVVPRVLASTVVALLLNGLVCAIGLSGGYVFSVFLQGVNPGAFINGLTVLTGL 187 Query 199 VDVVISMIKATLFGLMAGLIACYKGMSVGGGPAGVGRAVNETVVFAFIVLFVINIVVTAV 258 ++V++ +KA LFG+MAGL+ CY+G++V GGP GVG AVNETVV+AFI LFVIN+V+TA+ Sbjct 188 RELVLAEVKALLFGVMAGLVGCYRGLTVKGGPKGVGNAVNETVVYAFICLFVINVVMTAI 247 Query 259 GI 260 G+ Sbjct 248 GV 249 >gi|333992272|ref|YP_004524886.1| hypothetical protein JDM601_3632 [Mycobacterium sp. JDM601] gi|333488240|gb|AEF37632.1| membrane protein YrbE4A [Mycobacterium sp. JDM601] Length=254 Score = 279 bits (713), Expect = 3e-73, Method: Compositional matrix adjust. Identities = 141/247 (58%), Positives = 183/247 (75%), Gaps = 0/247 (0%) Query 19 PVGALGDFFAMTLDTSVCMFKPPFAWREYLLQCWFVARVSTLPGVLMTIPWAVISGFLFN 78 P A+G F M++DT MF+ PF +RE+L Q W +ARVS +P +L+ IP+ V+ F N Sbjct 8 PARAVGGFVEMSIDTFRAMFRRPFQYREFLDQTWMIARVSLVPTLLVAIPFTVLVAFTLN 67 Query 79 VLLTDIGAADFSGTGCAIFTVNQSAPIVTVLVVAGAGATAMCADLGARTIREELDALRVM 138 +LL +IGAAD SG G A T+ Q P+VTVLVVAGAGATA+CADLGARTIREE+DA+RV+ Sbjct 68 ILLREIGAADLSGAGTAFGTITQLGPVVTVLVVAGAGATAICADLGARTIREEIDAMRVL 127 Query 139 GINPIQALAAPRVLAATTVSLALNSVVTATGLIGAFFCSVFLMHVSAGAWVTGLTTLTHT 198 GI+PIQ L PR LA+T V+L LN +V A GL+G + SVFL V+ GA++ GLT LT Sbjct 128 GIDPIQRLVVPRALASTFVALLLNGLVCAIGLVGGYVFSVFLQGVNPGAFINGLTVLTGL 187 Query 199 VDVVISMIKATLFGLMAGLIACYKGMSVGGGPAGVGRAVNETVVFAFIVLFVINIVVTAV 258 ++V++ IKA LFG AGLI CY+G++ GGP GVG AVNETVV+AFI LFVIN+V+TA+ Sbjct 188 GELVMAEIKALLFGTAAGLIGCYRGLTAKGGPQGVGNAVNETVVYAFICLFVINVVMTAI 247 Query 259 GIPFMVS 265 + +V Sbjct 248 SVRVLVK 254 >gi|41406660|ref|NP_959496.1| hypothetical protein MAP0562 [Mycobacterium avium subsp. paratuberculosis K-10] gi|118465663|ref|YP_879935.1| hypothetical protein MAV_0655 [Mycobacterium avium 104] gi|254773611|ref|ZP_05215127.1| hypothetical protein MaviaA2_02900 [Mycobacterium avium subsp. avium ATCC 25291] gi|41395009|gb|AAS02879.1| hypothetical protein MAP_0562 [Mycobacterium avium subsp. paratuberculosis K-10] gi|118166950|gb|ABK67847.1| conserved hypothetical protein [Mycobacterium avium 104] gi|336458448|gb|EGO37422.1| ABC-type transport system involved in resistance to organic solvents, permease component [Mycobacterium avium subsp. paratuberculosis S397] Length=254 Score = 279 bits (713), Expect = 3e-73, Method: Compositional matrix adjust. Identities = 139/242 (58%), Positives = 183/242 (76%), Gaps = 0/242 (0%) Query 19 PVGALGDFFAMTLDTSVCMFKPPFAWREYLLQCWFVARVSTLPGVLMTIPWAVISGFLFN 78 P A+G FF M +DT F+ PF + E+L Q W +ARVS +P +L++IP+ V+ F N Sbjct 8 PARAVGGFFEMMIDTGRAAFRRPFQFGEFLDQTWMIARVSLVPTLLVSIPFTVLVAFTLN 67 Query 79 VLLTDIGAADFSGTGCAIFTVNQSAPIVTVLVVAGAGATAMCADLGARTIREELDALRVM 138 +LL +IGAAD SG G A T+ Q P+VTVLVVAGAGATA+CADLGARTIREE+DA+RV+ Sbjct 68 ILLREIGAADLSGAGTAFGTITQLGPVVTVLVVAGAGATAICADLGARTIREEIDAMRVL 127 Query 139 GINPIQALAAPRVLAATTVSLALNSVVTATGLIGAFFCSVFLMHVSAGAWVTGLTTLTHT 198 GI+PI L PRVLA+T V+L LN +V A GL G + SVFL V+ GA++ GLT LT Sbjct 128 GIDPIHRLVVPRVLASTVVALLLNGLVCAIGLSGGYVFSVFLQGVNPGAFINGLTVLTGL 187 Query 199 VDVVISMIKATLFGLMAGLIACYKGMSVGGGPAGVGRAVNETVVFAFIVLFVINIVVTAV 258 ++V++ +KA LFG+MAG++ CY+G++V GGP GVG AVNETVV+AFI LFVIN+V+TA+ Sbjct 188 RELVLAEVKALLFGVMAGMVGCYRGLTVKGGPKGVGNAVNETVVYAFICLFVINVVMTAI 247 Query 259 GI 260 G+ Sbjct 248 GV 249 >gi|118470037|ref|YP_890128.1| hypothetical protein MSMEG_5902 [Mycobacterium smegmatis str. MC2 155] gi|118171324|gb|ABK72220.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2 155] Length=254 Score = 279 bits (713), Expect = 3e-73, Method: Compositional matrix adjust. Identities = 141/242 (59%), Positives = 184/242 (77%), Gaps = 0/242 (0%) Query 19 PVGALGDFFAMTLDTSVCMFKPPFAWREYLLQCWFVARVSTLPGVLMTIPWAVISGFLFN 78 P A+G F M+LDT +F+ PF +E+L Q W +ARVS +P +L+ IP+ V+ F N Sbjct 8 PARAVGGFVEMSLDTFAKIFRRPFQLKEFLDQTWMIARVSLVPTLLVAIPFTVLVAFTLN 67 Query 79 VLLTDIGAADFSGTGCAIFTVNQSAPIVTVLVVAGAGATAMCADLGARTIREELDALRVM 138 +LL +IGAAD SG G A T+ Q P+VTVLVVAGAGATA+CADLGARTIREE+DA+RV+ Sbjct 68 ILLREIGAADLSGAGTAFGTITQLGPVVTVLVVAGAGATAICADLGARTIREEIDAMRVL 127 Query 139 GINPIQALAAPRVLAATTVSLALNSVVTATGLIGAFFCSVFLMHVSAGAWVTGLTTLTHT 198 GI+PIQ L PRVLA+T V+L LN +V A GL G + SVFL V+ GA++ GLT LT Sbjct 128 GIDPIQRLVVPRVLASTFVALLLNGLVCAIGLAGGYVFSVFLQGVNPGAFINGLTVLTGL 187 Query 199 VDVVISMIKATLFGLMAGLIACYKGMSVGGGPAGVGRAVNETVVFAFIVLFVINIVVTAV 258 ++V++ IKA LFG++AGL+ CY+G++V GGP GVG AVNETVV+AFI LFVIN+++TAV Sbjct 188 GELVLAEIKALLFGVVAGLVGCYRGLTVKGGPKGVGNAVNETVVYAFICLFVINVIMTAV 247 Query 259 GI 260 G+ Sbjct 248 GV 249 >gi|183984957|ref|YP_001853248.1| membrane protein YrbE4A [Mycobacterium marinum M] gi|183178283|gb|ACC43393.1| conserved membrane protein YrbE4A [Mycobacterium marinum M] Length=237 Score = 277 bits (709), Expect = 9e-73, Method: Compositional matrix adjust. Identities = 138/232 (60%), Positives = 181/232 (79%), Gaps = 0/232 (0%) Query 29 MTLDTSVCMFKPPFAWREYLLQCWFVARVSTLPGVLMTIPWAVISGFLFNVLLTDIGAAD 88 M++DT+ F+ PF +RE+L Q W VARVS +P +L++IP+ V+ F N+LL +IGAAD Sbjct 1 MSIDTARAAFRRPFQFREFLDQTWMVARVSLVPTLLVSIPFTVLVAFTLNILLREIGAAD 60 Query 89 FSGTGCAIFTVNQSAPIVTVLVVAGAGATAMCADLGARTIREELDALRVMGINPIQALAA 148 SG G A T+ Q P+VTVLVVAGAGATA+CADLGARTIREE+DA+RV+GI+PIQ L Sbjct 61 LSGAGTAFGTITQLGPVVTVLVVAGAGATAICADLGARTIREEIDAMRVLGIDPIQRLVV 120 Query 149 PRVLAATTVSLALNSVVTATGLIGAFFCSVFLMHVSAGAWVTGLTTLTHTVDVVISMIKA 208 PRVLA+T V+L LN +V A GL G + SVFL V+ GA++ GLT LT +++++ IKA Sbjct 121 PRVLASTVVALLLNGLVCAIGLSGGYAFSVFLQGVNPGAFINGLTVLTGLRELILAEIKA 180 Query 209 TLFGLMAGLIACYKGMSVGGGPAGVGRAVNETVVFAFIVLFVINIVVTAVGI 260 LFG+MAGL+ CY+G++V GGP GVG AVNETVV+AFI LFVIN+V+TA+G+ Sbjct 181 LLFGVMAGLVGCYRGLTVKGGPKGVGNAVNETVVYAFICLFVINVVMTAIGV 232 >gi|15843113|ref|NP_338150.1| hypothetical protein MT3605 [Mycobacterium tuberculosis CDC1551] gi|13883459|gb|AAK47964.1| conserved hypothetical protein [Mycobacterium tuberculosis CDC1551] Length=237 Score = 277 bits (709), Expect = 9e-73, Method: Compositional matrix adjust. Identities = 138/232 (60%), Positives = 181/232 (79%), Gaps = 0/232 (0%) Query 29 MTLDTSVCMFKPPFAWREYLLQCWFVARVSTLPGVLMTIPWAVISGFLFNVLLTDIGAAD 88 M++DT+ F+ PF +RE+L Q W VARVS +P +L++IP+ V+ F N+LL +IGAAD Sbjct 1 MSMDTARAAFRRPFQFREFLDQTWMVARVSLVPTLLVSIPFTVLVAFTLNILLREIGAAD 60 Query 89 FSGTGCAIFTVNQSAPIVTVLVVAGAGATAMCADLGARTIREELDALRVMGINPIQALAA 148 SG G A T+ Q P+VTVLVVAGAGATA+CADLGARTIREE+DA+RV+GI+PIQ L Sbjct 61 LSGAGTAFGTITQLGPVVTVLVVAGAGATAICADLGARTIREEIDAMRVLGIDPIQRLVV 120 Query 149 PRVLAATTVSLALNSVVTATGLIGAFFCSVFLMHVSAGAWVTGLTTLTHTVDVVISMIKA 208 PRVLA+T V+L LN +V A GL G + SVFL V+ GA++ GLT LT +++++ IKA Sbjct 121 PRVLASTLVALLLNGLVCAIGLSGGYAFSVFLQGVNPGAFINGLTVLTGLRELILAEIKA 180 Query 209 TLFGLMAGLIACYKGMSVGGGPAGVGRAVNETVVFAFIVLFVINIVVTAVGI 260 LFG+MAGL+ CY+G++V GGP GVG AVNETVV+AFI LFVIN+V+TA+G+ Sbjct 181 LLFGVMAGLVGCYRGLTVKGGPKGVGNAVNETVVYAFICLFVINVVMTAIGV 232 >gi|342861420|ref|ZP_08718068.1| hypothetical protein MCOL_21151 [Mycobacterium colombiense CECT 3035] gi|342131320|gb|EGT84601.1| hypothetical protein MCOL_21151 [Mycobacterium colombiense CECT 3035] Length=270 Score = 276 bits (707), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 140/243 (58%), Positives = 182/243 (75%), Gaps = 1/243 (0%) Query 19 PVGALGDFFAMTLDTSVCMFKPPFAWREYLLQCWFVARVSTLPGVLMTIPWAVISGFLFN 78 P A+G AM D + +F+ PF RE+L Q WFVARVS +P +L+ IP+ V+ F N Sbjct 23 PFQAIGGLVAMAADAAKFLFRRPFQGREFLEQSWFVARVSMMPTLLVAIPFTVLVSFTLN 82 Query 79 VLLTDIGAADFSGTGCAIFTVNQSAPIVTVLVVAGAGATAMCADLGARTIREELDALRVM 138 +LL ++GAAD SG G A V Q P+VTVL+VAGAGATAMCADLG+RTIREE+DAL V+ Sbjct 83 ILLRELGAADLSGAGAAFGAVTQVGPLVTVLIVAGAGATAMCADLGSRTIREEIDALEVL 142 Query 139 GINPIQALAAPRVLAATTVSLALNSVVTATGLIGAFFCSVFLMHVSAGAWVTGLTTLTHT 198 GINPIQ L APR+LA+ V+L LNSVV G++G +F SVF+ V+ GA+ G+T LT Sbjct 143 GINPIQRLVAPRMLASGVVALLLNSVVCIIGILGGYFFSVFVQQVNPGAFAAGITLLTGI 202 Query 199 VDVVISMIKATLFGLMAGLIACYKGMSV-GGGPAGVGRAVNETVVFAFIVLFVINIVVTA 257 +++IS +KA LFGL+AGL+ACY+G+++ GGG VG AVNETVV+AF+ LFVIN+VVTA Sbjct 203 PELIISSVKALLFGLVAGLVACYRGLTITGGGAKAVGNAVNETVVYAFMSLFVINVVVTA 262 Query 258 VGI 260 +GI Sbjct 263 IGI 265 >gi|169631233|ref|YP_001704882.1| hypothetical protein MAB_4155c [Mycobacterium abscessus ATCC 19977] gi|169243200|emb|CAM64228.1| Conserved hypothetical protein [Mycobacterium abscessus] Length=255 Score = 276 bits (706), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 141/247 (58%), Positives = 186/247 (76%), Gaps = 0/247 (0%) Query 19 PVGALGDFFAMTLDTSVCMFKPPFAWREYLLQCWFVARVSTLPGVLMTIPWAVISGFLFN 78 P A+G F +M+L T +F+ PF +E+L Q WF+ARVS LP +L+ IP+ V+ F N Sbjct 8 PARAVGGFVSMSLATFRNIFRRPFQGQEFLDQTWFIARVSLLPTLLVAIPFTVLVAFTLN 67 Query 79 VLLTDIGAADFSGTGCAIFTVNQSAPIVTVLVVAGAGATAMCADLGARTIREELDALRVM 138 +LL +IGAAD SG A TV Q P+VTVLVVAGAGATA+CADLGARTIREE+DA++V+ Sbjct 68 ILLREIGAADLSGAATAFGTVTQLGPVVTVLVVAGAGATAICADLGARTIREEIDAMQVL 127 Query 139 GINPIQALAAPRVLAATTVSLALNSVVTATGLIGAFFCSVFLMHVSAGAWVTGLTTLTHT 198 GI+PIQ L PRVLA+T V+L LN +V A G++G + SVFL V+ GA++ GLT LT Sbjct 128 GIDPIQRLVVPRVLASTFVALLLNGLVCAIGMVGGYVFSVFLQGVNPGAFINGLTVLTGL 187 Query 199 VDVVISMIKATLFGLMAGLIACYKGMSVGGGPAGVGRAVNETVVFAFIVLFVINIVVTAV 258 +++IS +KA LFG+ AGL+ CY+G++V GGP GVG AVNETVV+AFI LFVIN+V+TA+ Sbjct 188 GELMISEVKAFLFGIFAGLVGCYRGLTVKGGPKGVGDAVNETVVYAFICLFVINVVMTAI 247 Query 259 GIPFMVS 265 G+ +V Sbjct 248 GVRVLVK 254 >gi|118470268|ref|YP_889052.1| hypothetical protein MSMEG_4796 [Mycobacterium smegmatis str. MC2 155] gi|118171555|gb|ABK72451.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2 155] Length=257 Score = 276 bits (705), Expect = 3e-72, Method: Compositional matrix adjust. Identities = 140/243 (58%), Positives = 183/243 (76%), Gaps = 1/243 (0%) Query 19 PVGALGDFFAMTLDTSVCMFKPPFAWREYLLQCWFVARVSTLPGVLMTIPWAVISGFLFN 78 P+ A+G F+M+LD + F+ PF RE+L QCWF+ARVS P +L+ IP+ V+ F N Sbjct 10 PMQAVGALFSMSLDAIMFAFRRPFQGREFLDQCWFIARVSMAPTLLVAIPFTVLVSFTLN 69 Query 79 VLLTDIGAADFSGTGCAIFTVNQSAPIVTVLVVAGAGATAMCADLGARTIREELDALRVM 138 +LL ++GAAD SG G A V Q P+VTVL+VAGAGATAMCADLG+RTIREE+DA+ V+ Sbjct 70 ILLRELGAADLSGAGAAFGAVTQLGPMVTVLIVAGAGATAMCADLGSRTIREEIDAMEVL 129 Query 139 GINPIQALAAPRVLAATTVSLALNSVVTATGLIGAFFCSVFLMHVSAGAWVTGLTTLTHT 198 GINPIQ L PR+LA+ V+L LNS+V G++G + SVF+ V+ GA+ G+T LT Sbjct 130 GINPIQRLVTPRILASGLVALLLNSLVVIIGILGGYVFSVFIQDVNPGAFAAGITLLTGV 189 Query 199 VDVVISMIKATLFGLMAGLIACYKGMS-VGGGPAGVGRAVNETVVFAFIVLFVINIVVTA 257 +V+IS IKA LFGL+AGL+ACY+G++ VGGG VG AVNETVV+AF+ LFVIN+VVTA Sbjct 190 PEVIISCIKAALFGLIAGLVACYRGLTIVGGGAKAVGNAVNETVVYAFMALFVINVVVTA 249 Query 258 VGI 260 +GI Sbjct 250 IGI 252 >gi|183984680|ref|YP_001852971.1| hypothetical protein MMAR_4712 [Mycobacterium marinum M] gi|183178006|gb|ACC43116.1| conserved hypothetical membrane protein [Mycobacterium marinum M] Length=268 Score = 275 bits (702), Expect = 7e-72, Method: Compositional matrix adjust. Identities = 137/244 (57%), Positives = 183/244 (75%), Gaps = 1/244 (0%) Query 18 RPVGALGDFFAMTLDTSVCMFKPPFAWREYLLQCWFVARVSTLPGVLMTIPWAVISGFLF 77 +P+ A+G FAM+ D F+ PF WRE+L Q WFVARV+ LP +L+ IP+ V+ F Sbjct 20 KPMQAVGGLFAMSADAIKFAFRRPFQWREFLEQSWFVARVAMLPTLLVAIPFTVLVSFTL 79 Query 78 NVLLTDIGAADFSGTGCAIFTVNQSAPIVTVLVVAGAGATAMCADLGARTIREELDALRV 137 N+LL ++GAAD SG G A V Q P+VTVL+VAGAGATAMCADLG+RTIREE+DA+ V Sbjct 80 NILLRELGAADLSGAGAAFGAVTQVGPLVTVLIVAGAGATAMCADLGSRTIREEIDAMEV 139 Query 138 MGINPIQALAAPRVLAATTVSLALNSVVTATGLIGAFFCSVFLMHVSAGAWVTGLTTLTH 197 +GINP+Q L PR+LA+ V+L LNS+V G++G + SVF+ V+ GA+ G+T LT Sbjct 140 LGINPVQRLVTPRMLASGLVALLLNSLVVIIGIVGGYVFSVFVQDVNPGAFAAGITLLTG 199 Query 198 TVDVVISMIKATLFGLMAGLIACYKGMSV-GGGPAGVGRAVNETVVFAFIVLFVINIVVT 256 +V+IS +KA LFGL+AGL+ACY+G+++ GGG VG AVNETVV+AF+ LFV+N+VVT Sbjct 200 VPEVIISCVKAALFGLIAGLVACYRGLTISGGGAKAVGNAVNETVVYAFMSLFVVNVVVT 259 Query 257 AVGI 260 A+GI Sbjct 260 AIGI 263 >gi|342860430|ref|ZP_08717081.1| hypothetical protein MCOL_16186 [Mycobacterium colombiense CECT 3035] gi|342132085|gb|EGT85326.1| hypothetical protein MCOL_16186 [Mycobacterium colombiense CECT 3035] Length=260 Score = 274 bits (701), Expect = 9e-72, Method: Compositional matrix adjust. Identities = 139/243 (58%), Positives = 181/243 (75%), Gaps = 1/243 (0%) Query 19 PVGALGDFFAMTLDTSVCMFKPPFAWREYLLQCWFVARVSTLPGVLMTIPWAVISGFLFN 78 P+ A+G FAM+ D +F+ PF WRE+L Q WFVARVS P +L+ IP+ V+ F N Sbjct 13 PMHAVGALFAMSADAVKFLFRRPFQWREFLEQSWFVARVSLAPTLLVAIPFTVLVSFTLN 72 Query 79 VLLTDIGAADFSGTGCAIFTVNQSAPIVTVLVVAGAGATAMCADLGARTIREELDALRVM 138 +LL ++GAAD SG G A V Q P+VTVL+VAGAGATAMCADLG+RTIREE+DA+ V+ Sbjct 73 ILLRELGAADLSGAGAAFGAVTQLGPLVTVLIVAGAGATAMCADLGSRTIREEIDAMEVL 132 Query 139 GINPIQALAAPRVLAATTVSLALNSVVTATGLIGAFFCSVFLMHVSAGAWVTGLTTLTHT 198 GINPIQ L PR+LA+ V+ LNS+V G++G + SVF+ V+ GA+ G+T LT Sbjct 133 GINPIQRLVTPRMLASGLVAFLLNSLVVIIGVLGGYVFSVFVQDVNPGAFAAGITLLTGV 192 Query 199 VDVVISMIKATLFGLMAGLIACYKGMSV-GGGPAGVGRAVNETVVFAFIVLFVINIVVTA 257 +VVIS +KA LFGL+AGL+ACY+G+S+ GGG VG AVNETVV+AF+ LFV+N+VVTA Sbjct 193 PEVVISCVKAALFGLIAGLVACYRGLSITGGGAKAVGNAVNETVVYAFMSLFVVNVVVTA 252 Query 258 VGI 260 +GI Sbjct 253 IGI 255 >gi|312138208|ref|YP_004005544.1| integral membrane protein yrbe2a [Rhodococcus equi 103S] gi|311887547|emb|CBH46859.1| putative integral membrane protein YrbE2A [Rhodococcus equi 103S] Length=275 Score = 273 bits (699), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 143/253 (57%), Positives = 185/253 (74%), Gaps = 0/253 (0%) Query 10 GRVADPVLRPVGALGDFFAMTLDTSVCMFKPPFAWREYLLQCWFVARVSTLPGVLMTIPW 69 G V D + P+ A G FFAM+ DT +F PF RE++ Q WFVARVS +P VL+ IP+ Sbjct 20 GNVVDLLEVPLRAAGGFFAMSADTLRAVFSRPFQRREFVDQAWFVARVSMVPTVLVAIPF 79 Query 70 AVISGFLFNVLLTDIGAADFSGTGCAIFTVNQSAPIVTVLVVAGAGATAMCADLGARTIR 129 V+ F N+LL +IGAAD SG G A+ V Q PIVTVL+VAGAGATA+CADL ARTIR Sbjct 80 TVLVSFTINILLREIGAADLSGAGAALGAVTQVGPIVTVLIVAGAGATAICADLAARTIR 139 Query 130 EELDALRVMGINPIQALAAPRVLAATTVSLALNSVVTATGLIGAFFCSVFLMHVSAGAWV 189 EE+DA+RV+GINPI L PRVLA+T V+L LN +V G++G F SV++ V+ GA+V Sbjct 140 EEIDAMRVLGINPIHRLVVPRVLASTVVALLLNGLVCTIGILGGFLFSVYVQDVNPGAFV 199 Query 190 TGLTTLTHTVDVVISMIKATLFGLMAGLIACYKGMSVGGGPAGVGRAVNETVVFAFIVLF 249 G+T LT +++ISM+KA LFG++AGL+A Y GM+V GG VG AVN+TVVF+F+ LF Sbjct 200 NGITLLTGFGELMISMLKAGLFGMIAGLMAAYLGMNVRGGAKSVGDAVNQTVVFSFMALF 259 Query 250 VINIVVTAVGIPF 262 V+N++VTAVGI Sbjct 260 VVNVLVTAVGIKL 272 >gi|254773835|ref|ZP_05215351.1| TrnB1 protein [Mycobacterium avium subsp. avium ATCC 25291] Length=260 Score = 273 bits (699), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 139/240 (58%), Positives = 179/240 (75%), Gaps = 1/240 (0%) Query 22 ALGDFFAMTLDTSVCMFKPPFAWREYLLQCWFVARVSTLPGVLMTIPWAVISGFLFNVLL 81 A+G FAM+ D +F+ PF WRE+L Q WFVARVS P +L+ IP+ V+ F N+LL Sbjct 16 AVGALFAMSADAVKYLFRRPFQWREFLEQSWFVARVSLAPTLLVAIPFTVLVSFTLNILL 75 Query 82 TDIGAADFSGTGCAIFTVNQSAPIVTVLVVAGAGATAMCADLGARTIREELDALRVMGIN 141 ++GAAD SG G A V Q P+VTVL+VAGAGATAMCADLG+RTIREE+DA+ V+GIN Sbjct 76 RELGAADLSGAGAAFGAVTQLGPLVTVLIVAGAGATAMCADLGSRTIREEIDAMEVLGIN 135 Query 142 PIQALAAPRVLAATTVSLALNSVVTATGLIGAFFCSVFLMHVSAGAWVTGLTTLTHTVDV 201 PIQ L PR+LA+ V+ LNS+V G++G + SVF+ V+ GA+ G+T LT +V Sbjct 136 PIQRLVTPRMLASGLVAFLLNSLVVIIGVLGGYVFSVFVQDVNPGAFAAGITLLTGVPEV 195 Query 202 VISMIKATLFGLMAGLIACYKGMSV-GGGPAGVGRAVNETVVFAFIVLFVINIVVTAVGI 260 VIS IKA LFGL+AGL+ACY+G+S+ GGG VG AVNETVV+AF+ LFV+N+VVTA+GI Sbjct 196 VISCIKAALFGLIAGLVACYRGLSITGGGAKAVGNAVNETVVYAFMSLFVVNVVVTAIGI 255 >gi|41406855|ref|NP_959691.1| hypothetical protein MAP0757 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41395205|gb|AAS03074.1| hypothetical protein MAP_0757 [Mycobacterium avium subsp. paratuberculosis K-10] Length=260 Score = 273 bits (698), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 139/240 (58%), Positives = 179/240 (75%), Gaps = 1/240 (0%) Query 22 ALGDFFAMTLDTSVCMFKPPFAWREYLLQCWFVARVSTLPGVLMTIPWAVISGFLFNVLL 81 A+G FAM+ D +F+ PF WRE+L Q WFVARVS P +L+ IP+ V+ F N+LL Sbjct 16 AVGALFAMSADAVKYLFRRPFQWREFLEQSWFVARVSLAPTLLVAIPFTVLVSFTLNILL 75 Query 82 TDIGAADFSGTGCAIFTVNQSAPIVTVLVVAGAGATAMCADLGARTIREELDALRVMGIN 141 ++GAAD SG G A V Q P+VTVL+VAGAGATAMCADLG+RTIREE+DA+ V+GIN Sbjct 76 RELGAADLSGAGAAFGAVTQLGPLVTVLIVAGAGATAMCADLGSRTIREEIDAMEVLGIN 135 Query 142 PIQALAAPRVLAATTVSLALNSVVTATGLIGAFFCSVFLMHVSAGAWVTGLTTLTHTVDV 201 PIQ L PR+LA+ V+ LNS+V G++G + SVF+ V+ GA+ G+T LT +V Sbjct 136 PIQRLVTPRMLASGLVAFLLNSLVVIIGVLGGYVFSVFVQDVNPGAFAAGITLLTGVPEV 195 Query 202 VISMIKATLFGLMAGLIACYKGMSV-GGGPAGVGRAVNETVVFAFIVLFVINIVVTAVGI 260 VIS IKA LFGL+AGL+ACY+G+S+ GGG VG AVNETVV+AF+ LFV+N+VVTA+GI Sbjct 196 VISCIKAALFGLIAGLVACYRGLSITGGGAKAVGNAVNETVVYAFMSLFVVNVVVTAIGI 255 >gi|325674886|ref|ZP_08154573.1| membrane protein YrbE4A [Rhodococcus equi ATCC 33707] gi|325554472|gb|EGD24147.1| membrane protein YrbE4A [Rhodococcus equi ATCC 33707] Length=263 Score = 273 bits (698), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 143/253 (57%), Positives = 185/253 (74%), Gaps = 0/253 (0%) Query 10 GRVADPVLRPVGALGDFFAMTLDTSVCMFKPPFAWREYLLQCWFVARVSTLPGVLMTIPW 69 G V D + P+ A G FFAM+ DT +F PF RE++ Q WFVARVS +P VL+ IP+ Sbjct 8 GNVVDLLEVPLRAAGGFFAMSADTLRAVFSRPFQRREFVDQAWFVARVSMVPTVLVAIPF 67 Query 70 AVISGFLFNVLLTDIGAADFSGTGCAIFTVNQSAPIVTVLVVAGAGATAMCADLGARTIR 129 V+ F N+LL +IGAAD SG G A+ V Q PIVTVL+VAGAGATA+CADL ARTIR Sbjct 68 TVLVSFTINILLREIGAADLSGAGAALGAVTQVGPIVTVLIVAGAGATAICADLAARTIR 127 Query 130 EELDALRVMGINPIQALAAPRVLAATTVSLALNSVVTATGLIGAFFCSVFLMHVSAGAWV 189 EE+DA+RV+GINPI L PRVLA+T V+L LN +V G++G F SV++ V+ GA+V Sbjct 128 EEIDAMRVLGINPIHRLVVPRVLASTVVALLLNGLVCTIGILGGFLFSVYVQDVNPGAFV 187 Query 190 TGLTTLTHTVDVVISMIKATLFGLMAGLIACYKGMSVGGGPAGVGRAVNETVVFAFIVLF 249 G+T LT +++ISM+KA LFG++AGL+A Y GM+V GG VG AVN+TVVF+F+ LF Sbjct 188 NGITLLTGFGELMISMLKAGLFGMIAGLMAAYLGMNVRGGAKSVGDAVNQTVVFSFMALF 247 Query 250 VINIVVTAVGIPF 262 V+N++VTAVGI Sbjct 248 VVNVLVTAVGIKL 260 >gi|120406152|ref|YP_955981.1| hypothetical protein Mvan_5204 [Mycobacterium vanbaalenii PYR-1] gi|119958970|gb|ABM15975.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii PYR-1] Length=237 Score = 273 bits (698), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 139/237 (59%), Positives = 181/237 (77%), Gaps = 0/237 (0%) Query 29 MTLDTSVCMFKPPFAWREYLLQCWFVARVSTLPGVLMTIPWAVISGFLFNVLLTDIGAAD 88 M+LDT V F+ PF +RE+L Q W +ARVS +P +L+ IP+ V+ F N+LL +IGAAD Sbjct 1 MSLDTFVKTFRRPFQFREFLEQTWMIARVSLVPTLLVAIPFTVLVAFTLNILLREIGAAD 60 Query 89 FSGTGCAIFTVNQSAPIVTVLVVAGAGATAMCADLGARTIREELDALRVMGINPIQALAA 148 SG G A T+ Q P+VTVLVVAGAGATA+CADLGARTIREE+DA+RV+GI+PIQ L Sbjct 61 LSGAGTAFGTITQLGPVVTVLVVAGAGATAICADLGARTIREEIDAMRVLGIDPIQRLVV 120 Query 149 PRVLAATTVSLALNSVVTATGLIGAFFCSVFLMHVSAGAWVTGLTTLTHTVDVVISMIKA 208 PRVLA+T V+L LN +V GL G + SVFL V+ GA++ GLT LT ++V++ IKA Sbjct 121 PRVLASTFVALLLNGLVCLIGLSGGYVFSVFLQGVNPGAFINGLTVLTGLGELVLAEIKA 180 Query 209 TLFGLMAGLIACYKGMSVGGGPAGVGRAVNETVVFAFIVLFVINIVVTAVGIPFMVS 265 LFG++AGL+ CY+G++V GGP GVG AVNETVV+AFI LFVIN+++TAVG+ + S Sbjct 181 LLFGVVAGLVGCYRGLTVKGGPKGVGNAVNETVVYAFICLFVINVIMTAVGVRVLDS 237 >gi|315443550|ref|YP_004076429.1| ABC transporter involved in resistance to organic solvents, permease [Mycobacterium sp. Spyr1] gi|315261853|gb|ADT98594.1| ABC-type transport system involved in resistance to organic solvents, permease component [Mycobacterium sp. Spyr1] Length=269 Score = 273 bits (698), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 137/240 (58%), Positives = 181/240 (76%), Gaps = 1/240 (0%) Query 22 ALGDFFAMTLDTSVCMFKPPFAWREYLLQCWFVARVSTLPGVLMTIPWAVISGFLFNVLL 81 A+G FF+M LD +F PF WRE+L Q WFVA+VS P +L+ IP+ V+ F N+LL Sbjct 25 AVGGFFSMALDAVRFVFVRPFQWREFLEQSWFVAKVSMAPTLLVAIPFTVLVSFTLNILL 84 Query 82 TDIGAADFSGTGCAIFTVNQSAPIVTVLVVAGAGATAMCADLGARTIREELDALRVMGIN 141 ++GAAD SG G A V Q P+VTVL+VAGAGATAMCADLG+RTIREE+DA+ V+GIN Sbjct 85 RELGAADLSGAGAAFGAVTQVGPLVTVLIVAGAGATAMCADLGSRTIREEIDAMEVLGIN 144 Query 142 PIQALAAPRVLAATTVSLALNSVVTATGLIGAFFCSVFLMHVSAGAWVTGLTTLTHTVDV 201 P+Q L PR+LA+ V+L LNS+V G++G +F S+F+ V+ GA+ G+T LT +V Sbjct 145 PVQRLVTPRMLASGLVALLLNSLVVIIGILGGYFFSIFVQDVNPGAFAAGITLLTGVPEV 204 Query 202 VISMIKATLFGLMAGLIACYKGMSV-GGGPAGVGRAVNETVVFAFIVLFVINIVVTAVGI 260 +IS +KA LFGL+AGL+ACY+G+++ GGG VG AVNETVV+AF+ LFVIN+VVTA+GI Sbjct 205 IISCVKAALFGLIAGLVACYRGLTITGGGAKAVGNAVNETVVYAFMALFVINVVVTAIGI 264 Lambda K H 0.329 0.140 0.424 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 401076841216 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40