BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv1965
Length=271
Score E
Sequences producing significant alignments: (Bits) Value
gi|15609102|ref|NP_216481.1| integral membrane protein YrbE3b [M... 533 1e-149
gi|167970513|ref|ZP_02552790.1| hypothetical integral membrane p... 505 3e-141
gi|289554258|ref|ZP_06443468.1| hypothetical membrane protein yr... 481 6e-134
gi|183982885|ref|YP_001851176.1| integral membrane protein, YrbE... 474 5e-132
gi|118618293|ref|YP_906625.1| integral membrane protein, Yrb3B [... 399 3e-109
gi|120401387|ref|YP_951216.1| hypothetical protein Mvan_0362 [My... 395 5e-108
gi|120404937|ref|YP_954766.1| hypothetical protein Mvan_3983 [My... 390 1e-106
gi|118472034|ref|YP_884758.1| hypothetical protein MSMEG_0345 [M... 369 4e-100
gi|118619126|ref|YP_907458.1| integral membrane protein YrbE3B_1... 347 8e-94
gi|120405557|ref|YP_955386.1| hypothetical protein Mvan_4605 [My... 342 5e-92
gi|254820120|ref|ZP_05225121.1| hypothetical protein MintA_09346... 338 4e-91
gi|126436761|ref|YP_001072452.1| hypothetical protein Mjls_4189 ... 332 3e-89
gi|145222688|ref|YP_001133366.1| hypothetical protein Mflv_2100 ... 323 2e-86
gi|120401936|ref|YP_951765.1| hypothetical protein Mvan_0921 [My... 318 7e-85
gi|342857629|ref|ZP_08714285.1| hypothetical protein MCOL_02095 ... 316 2e-84
gi|120405353|ref|YP_955182.1| hypothetical protein Mvan_4400 [My... 315 4e-84
gi|108798493|ref|YP_638690.1| hypothetical protein Mmcs_1523 [My... 312 4e-83
gi|119867594|ref|YP_937546.1| hypothetical protein Mkms_1546 [My... 311 6e-83
gi|126436743|ref|YP_001072434.1| hypothetical protein Mjls_4171 ... 306 2e-81
gi|254774785|ref|ZP_05216301.1| TrnB2 protein [Mycobacterium avi... 304 9e-81
gi|118465348|ref|YP_881277.1| TrnB2 protein [Mycobacterium avium... 302 3e-80
gi|296171120|ref|ZP_06852573.1| ABC superfamily ATP binding cass... 296 2e-78
gi|342857465|ref|ZP_08714121.1| TrnB2 protein [Mycobacterium col... 296 3e-78
gi|240170712|ref|ZP_04749371.1| hypothetical protein MkanA1_1546... 288 6e-76
gi|254819937|ref|ZP_05224938.1| TrnB2 protein [Mycobacterium int... 282 4e-74
gi|118466059|ref|YP_881723.1| TrnB2 protein [Mycobacterium avium... 280 1e-73
gi|108797254|ref|YP_637451.1| hypothetical protein Mmcs_0274 [My... 278 7e-73
gi|108801581|ref|YP_641778.1| hypothetical protein Mmcs_4618 [My... 275 4e-72
gi|126437565|ref|YP_001073256.1| hypothetical protein Mjls_5001 ... 275 7e-72
gi|226361937|ref|YP_002779715.1| YrbE family protein [Rhodococcu... 273 2e-71
gi|119867718|ref|YP_937670.1| hypothetical protein Mkms_1677 [My... 271 7e-71
gi|120403834|ref|YP_953663.1| hypothetical protein Mvan_2850 [My... 271 7e-71
gi|226306857|ref|YP_002766817.1| YrbE family protein [Rhodococcu... 270 1e-70
gi|108800638|ref|YP_640835.1| hypothetical protein Mmcs_3672 [My... 269 3e-70
gi|118473565|ref|YP_887174.1| hypothetical protein MSMEG_2854 [M... 269 4e-70
gi|126436262|ref|YP_001071953.1| hypothetical protein Mjls_3685 ... 268 5e-70
gi|284034023|ref|YP_003383954.1| hypothetical protein Kfla_6152 ... 268 6e-70
gi|145225117|ref|YP_001135795.1| hypothetical protein Mflv_4539 ... 267 1e-69
gi|118469369|ref|YP_889051.1| ABC transporter transmembrane prot... 266 2e-69
gi|342860431|ref|ZP_08717082.1| TrnB2 protein [Mycobacterium col... 265 8e-69
gi|120402601|ref|YP_952430.1| hypothetical protein Mvan_1595 [My... 264 1e-68
gi|269128542|ref|YP_003301912.1| hypothetical protein Tcur_4347 ... 263 2e-68
gi|333992271|ref|YP_004524885.1| hypothetical protein JDM601_363... 262 4e-68
gi|296169578|ref|ZP_06851198.1| ABC superfamily ATP binding cass... 261 5e-68
gi|54022503|ref|YP_116745.1| putative YrbE family protein [Nocar... 261 6e-68
gi|118463834|ref|YP_879936.1| ABC transporter transmembrane prot... 261 9e-68
gi|41406661|ref|NP_959497.1| hypothetical protein MAP0563 [Mycob... 261 1e-67
gi|134103292|ref|YP_001108953.1| putative ABC transport system p... 261 1e-67
gi|291004489|ref|ZP_06562462.1| putative ABC transport system pe... 261 1e-67
gi|342862239|ref|ZP_08718881.1| ABC transporter transmembrane pr... 260 1e-67
>gi|15609102|ref|NP_216481.1| integral membrane protein YrbE3b [Mycobacterium tuberculosis
H37Rv]
gi|15841440|ref|NP_336477.1| hypothetical protein MT2017 [Mycobacterium tuberculosis CDC1551]
gi|148661774|ref|YP_001283297.1| integral membrane protein YrbE3b [Mycobacterium tuberculosis
H37Ra]
59 more sequence titles
Length=271
Score = 533 bits (1372), Expect = 1e-149, Method: Compositional matrix adjust.
Identities = 271/271 (100%), Positives = 271/271 (100%), Gaps = 0/271 (0%)
Query 1 MTAAKALVSEWNRMGSQMRFFVGTLAGIPDALMHYRGELLRVIAQMGLGTGVLAVIGGTV 60
MTAAKALVSEWNRMGSQMRFFVGTLAGIPDALMHYRGELLRVIAQMGLGTGVLAVIGGTV
Sbjct 1 MTAAKALVSEWNRMGSQMRFFVGTLAGIPDALMHYRGELLRVIAQMGLGTGVLAVIGGTV 60
Query 61 AIVGFLAMTTGAIVAVQGYNQFASVGVEALTGFASAFFNTREIQPGTVMVALAATVGAGT 120
AIVGFLAMTTGAIVAVQGYNQFASVGVEALTGFASAFFNTREIQPGTVMVALAATVGAGT
Sbjct 61 AIVGFLAMTTGAIVAVQGYNQFASVGVEALTGFASAFFNTREIQPGTVMVALAATVGAGT 120
Query 121 TAALGAMRINEEIDALEVIGIRSISYLASTRVLAGVVVAVPLFCVGLMTAYLAARVGTTA 180
TAALGAMRINEEIDALEVIGIRSISYLASTRVLAGVVVAVPLFCVGLMTAYLAARVGTTA
Sbjct 121 TAALGAMRINEEIDALEVIGIRSISYLASTRVLAGVVVAVPLFCVGLMTAYLAARVGTTA 180
Query 181 IYGQGSGVYDHYFNTFLRPTDVLWSSVEVVVVALMIMLVCTYYGYAAHGGPAGVGEAVGR 240
IYGQGSGVYDHYFNTFLRPTDVLWSSVEVVVVALMIMLVCTYYGYAAHGGPAGVGEAVGR
Sbjct 181 IYGQGSGVYDHYFNTFLRPTDVLWSSVEVVVVALMIMLVCTYYGYAAHGGPAGVGEAVGR 240
Query 241 AVRASMVVASIAILVMTLAIYGQSPNFHLAT 271
AVRASMVVASIAILVMTLAIYGQSPNFHLAT
Sbjct 241 AVRASMVVASIAILVMTLAIYGQSPNFHLAT 271
>gi|167970513|ref|ZP_02552790.1| hypothetical integral membrane protein yrbE3B [Mycobacterium
tuberculosis H37Ra]
gi|254550985|ref|ZP_05141432.1| hypothetical protein Mtube_11071 [Mycobacterium tuberculosis
'98-R604 INH-RIF-EM']
gi|289447582|ref|ZP_06437326.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis
CPHL_A]
gi|298525459|ref|ZP_07012868.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
gi|289420540|gb|EFD17741.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis
CPHL_A]
gi|298495253|gb|EFI30547.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
gi|339294890|gb|AEJ47001.1| integral membrane protein YrbE3b [Mycobacterium tuberculosis
CCDC5079]
gi|339298513|gb|AEJ50623.1| integral membrane protein YrbE3b [Mycobacterium tuberculosis
CCDC5180]
Length=258
Score = 505 bits (1300), Expect = 3e-141, Method: Compositional matrix adjust.
Identities = 258/258 (100%), Positives = 258/258 (100%), Gaps = 0/258 (0%)
Query 14 MGSQMRFFVGTLAGIPDALMHYRGELLRVIAQMGLGTGVLAVIGGTVAIVGFLAMTTGAI 73
MGSQMRFFVGTLAGIPDALMHYRGELLRVIAQMGLGTGVLAVIGGTVAIVGFLAMTTGAI
Sbjct 1 MGSQMRFFVGTLAGIPDALMHYRGELLRVIAQMGLGTGVLAVIGGTVAIVGFLAMTTGAI 60
Query 74 VAVQGYNQFASVGVEALTGFASAFFNTREIQPGTVMVALAATVGAGTTAALGAMRINEEI 133
VAVQGYNQFASVGVEALTGFASAFFNTREIQPGTVMVALAATVGAGTTAALGAMRINEEI
Sbjct 61 VAVQGYNQFASVGVEALTGFASAFFNTREIQPGTVMVALAATVGAGTTAALGAMRINEEI 120
Query 134 DALEVIGIRSISYLASTRVLAGVVVAVPLFCVGLMTAYLAARVGTTAIYGQGSGVYDHYF 193
DALEVIGIRSISYLASTRVLAGVVVAVPLFCVGLMTAYLAARVGTTAIYGQGSGVYDHYF
Sbjct 121 DALEVIGIRSISYLASTRVLAGVVVAVPLFCVGLMTAYLAARVGTTAIYGQGSGVYDHYF 180
Query 194 NTFLRPTDVLWSSVEVVVVALMIMLVCTYYGYAAHGGPAGVGEAVGRAVRASMVVASIAI 253
NTFLRPTDVLWSSVEVVVVALMIMLVCTYYGYAAHGGPAGVGEAVGRAVRASMVVASIAI
Sbjct 181 NTFLRPTDVLWSSVEVVVVALMIMLVCTYYGYAAHGGPAGVGEAVGRAVRASMVVASIAI 240
Query 254 LVMTLAIYGQSPNFHLAT 271
LVMTLAIYGQSPNFHLAT
Sbjct 241 LVMTLAIYGQSPNFHLAT 258
>gi|289554258|ref|ZP_06443468.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis
KZN 605]
gi|289438890|gb|EFD21383.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis
KZN 605]
Length=247
Score = 481 bits (1237), Expect = 6e-134, Method: Compositional matrix adjust.
Identities = 246/247 (99%), Positives = 247/247 (100%), Gaps = 0/247 (0%)
Query 25 LAGIPDALMHYRGELLRVIAQMGLGTGVLAVIGGTVAIVGFLAMTTGAIVAVQGYNQFAS 84
+AGIPDALMHYRGELLRVIAQMGLGTGVLAVIGGTVAIVGFLAMTTGAIVAVQGYNQFAS
Sbjct 1 MAGIPDALMHYRGELLRVIAQMGLGTGVLAVIGGTVAIVGFLAMTTGAIVAVQGYNQFAS 60
Query 85 VGVEALTGFASAFFNTREIQPGTVMVALAATVGAGTTAALGAMRINEEIDALEVIGIRSI 144
VGVEALTGFASAFFNTREIQPGTVMVALAATVGAGTTAALGAMRINEEIDALEVIGIRSI
Sbjct 61 VGVEALTGFASAFFNTREIQPGTVMVALAATVGAGTTAALGAMRINEEIDALEVIGIRSI 120
Query 145 SYLASTRVLAGVVVAVPLFCVGLMTAYLAARVGTTAIYGQGSGVYDHYFNTFLRPTDVLW 204
SYLASTRVLAGVVVAVPLFCVGLMTAYLAARVGTTAIYGQGSGVYDHYFNTFLRPTDVLW
Sbjct 121 SYLASTRVLAGVVVAVPLFCVGLMTAYLAARVGTTAIYGQGSGVYDHYFNTFLRPTDVLW 180
Query 205 SSVEVVVVALMIMLVCTYYGYAAHGGPAGVGEAVGRAVRASMVVASIAILVMTLAIYGQS 264
SSVEVVVVALMIMLVCTYYGYAAHGGPAGVGEAVGRAVRASMVVASIAILVMTLAIYGQS
Sbjct 181 SSVEVVVVALMIMLVCTYYGYAAHGGPAGVGEAVGRAVRASMVVASIAILVMTLAIYGQS 240
Query 265 PNFHLAT 271
PNFHLAT
Sbjct 241 PNFHLAT 247
>gi|183982885|ref|YP_001851176.1| integral membrane protein, YrbE3B [Mycobacterium marinum M]
gi|183176211|gb|ACC41321.1| conserved hypothetical integral membrane protein, YrbE3B [Mycobacterium
marinum M]
Length=284
Score = 474 bits (1221), Expect = 5e-132, Method: Compositional matrix adjust.
Identities = 245/268 (92%), Positives = 255/268 (96%), Gaps = 0/268 (0%)
Query 4 AKALVSEWNRMGSQMRFFVGTLAGIPDALMHYRGELLRVIAQMGLGTGVLAVIGGTVAIV 63
AK+LV EWNR+GSQMRF+V TL GIPDA+MHYR ELLRVIAQMG G G LAVIGGTV IV
Sbjct 17 AKSLVREWNRLGSQMRFYVTTLTGIPDAVMHYRSELLRVIAQMGFGAGTLAVIGGTVVIV 76
Query 64 GFLAMTTGAIVAVQGYNQFASVGVEALTGFASAFFNTREIQPGTVMVALAATVGAGTTAA 123
GFLAMTTGAIVAVQGYNQFASVGVEALTGFASAFFNTREIQPGTVMVALAATVGAG TA
Sbjct 77 GFLAMTTGAIVAVQGYNQFASVGVEALTGFASAFFNTREIQPGTVMVALAATVGAGATAQ 136
Query 124 LGAMRINEEIDALEVIGIRSISYLASTRVLAGVVVAVPLFCVGLMTAYLAARVGTTAIYG 183
LGAMRINEEIDALEVIGIRS+SYLASTRVLAGVVVA+PLFCVGL+TAYLAAR GTTAIYG
Sbjct 137 LGAMRINEEIDALEVIGIRSVSYLASTRVLAGVVVAIPLFCVGLITAYLAARAGTTAIYG 196
Query 184 QGSGVYDHYFNTFLRPTDVLWSSVEVVVVALMIMLVCTYYGYAAHGGPAGVGEAVGRAVR 243
QGSGVYDHYFNTFLRPTDVLWSS EVVVVALMIMLVCTYYGY AHGGPAGVGEAVGRAVR
Sbjct 197 QGSGVYDHYFNTFLRPTDVLWSSFEVVVVALMIMLVCTYYGYNAHGGPAGVGEAVGRAVR 256
Query 244 ASMVVASIAILVMTLAIYGQSPNFHLAT 271
ASMVVASIAI++MTLAIYGQSPNFHLA+
Sbjct 257 ASMVVASIAIVIMTLAIYGQSPNFHLAS 284
>gi|118618293|ref|YP_906625.1| integral membrane protein, Yrb3B [Mycobacterium ulcerans Agy99]
gi|118570403|gb|ABL05154.1| conserved hypothetical integral membrane protein, Yrb3B [Mycobacterium
ulcerans Agy99]
Length=230
Score = 399 bits (1025), Expect = 3e-109, Method: Compositional matrix adjust.
Identities = 211/229 (93%), Positives = 218/229 (96%), Gaps = 0/229 (0%)
Query 43 IAQMGLGTGVLAVIGGTVAIVGFLAMTTGAIVAVQGYNQFASVGVEALTGFASAFFNTRE 102
IAQMG G G LAVIGGTV IVGFL MTTGAIVAVQGYNQFASVGVEALTGFASAFFN RE
Sbjct 2 IAQMGFGAGTLAVIGGTVVIVGFLGMTTGAIVAVQGYNQFASVGVEALTGFASAFFNARE 61
Query 103 IQPGTVMVALAATVGAGTTAALGAMRINEEIDALEVIGIRSISYLASTRVLAGVVVAVPL 162
IQPGTVMVALAATVGAG TA LGAMRINEEIDALEVIGIRS+SYLASTRVLAGVVVA+PL
Sbjct 62 IQPGTVMVALAATVGAGATAQLGAMRINEEIDALEVIGIRSVSYLASTRVLAGVVVAIPL 121
Query 163 FCVGLMTAYLAARVGTTAIYGQGSGVYDHYFNTFLRPTDVLWSSVEVVVVALMIMLVCTY 222
FCVGL+TAYLAAR GTTAIYGQGSGVYDHYFNTFLRPTDVLWSS EVVV+ALMIMLVCTY
Sbjct 122 FCVGLITAYLAARAGTTAIYGQGSGVYDHYFNTFLRPTDVLWSSFEVVVLALMIMLVCTY 181
Query 223 YGYAAHGGPAGVGEAVGRAVRASMVVASIAILVMTLAIYGQSPNFHLAT 271
YGY AHGGPAGVGEAVGRAVRASMVVASIAI++MTLAIYGQSPNFHLA+
Sbjct 182 YGYNAHGGPAGVGEAVGRAVRASMVVASIAIVIMTLAIYGQSPNFHLAS 230
>gi|120401387|ref|YP_951216.1| hypothetical protein Mvan_0362 [Mycobacterium vanbaalenii PYR-1]
gi|119954205|gb|ABM11210.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii
PYR-1]
Length=284
Score = 395 bits (1014), Expect = 5e-108, Method: Compositional matrix adjust.
Identities = 195/268 (73%), Positives = 230/268 (86%), Gaps = 0/268 (0%)
Query 3 AAKALVSEWNRMGSQMRFFVGTLAGIPDALMHYRGELLRVIAQMGLGTGVLAVIGGTVAI 62
AA + + WN +G Q RF+ GTL +PDA+ Y GELLR+IAQMGLGTG LAV+GGTVAI
Sbjct 16 AAHEVAAGWNELGDQARFYAGTLRAVPDAVRRYPGELLRLIAQMGLGTGALAVVGGTVAI 75
Query 63 VGFLAMTTGAIVAVQGYNQFASVGVEALTGFASAFFNTREIQPGTVMVALAATVGAGTTA 122
VGFL +TTGA+VAVQGYNQFASVGVEALTGFASAFFN R I PGT VAL+AT+GAG TA
Sbjct 76 VGFLTITTGALVAVQGYNQFASVGVEALTGFASAFFNVRLIVPGTTAVALSATIGAGATA 135
Query 123 ALGAMRINEEIDALEVIGIRSISYLASTRVLAGVVVAVPLFCVGLMTAYLAARVGTTAIY 182
LGAMRINEEIDALEVIGIRS++YLA+TRVLAGVVV +PL+C+ +M A+LAAR GTT IY
Sbjct 136 QLGAMRINEEIDALEVIGIRSVTYLAATRVLAGVVVVIPLYCIAVMMAFLAARTGTTVIY 195
Query 183 GQGSGVYDHYFNTFLRPTDVLWSSVEVVVVALMIMLVCTYYGYAAHGGPAGVGEAVGRAV 242
GQGSGVYDHYFNTFL PTD++WS ++ V + +++MLV TYYGY A GGPAGVGEAVGRAV
Sbjct 196 GQGSGVYDHYFNTFLNPTDLVWSFLQSVAITVVVMLVHTYYGYTARGGPAGVGEAVGRAV 255
Query 243 RASMVVASIAILVMTLAIYGQSPNFHLA 270
R SMVVA++ I++++LAIYGQS NF+LA
Sbjct 256 RTSMVVAAVEIVMISLAIYGQSGNFNLA 283
>gi|120404937|ref|YP_954766.1| hypothetical protein Mvan_3983 [Mycobacterium vanbaalenii PYR-1]
gi|119957755|gb|ABM14760.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii
PYR-1]
Length=284
Score = 390 bits (1002), Expect = 1e-106, Method: Compositional matrix adjust.
Identities = 191/260 (74%), Positives = 225/260 (87%), Gaps = 0/260 (0%)
Query 11 WNRMGSQMRFFVGTLAGIPDALMHYRGELLRVIAQMGLGTGVLAVIGGTVAIVGFLAMTT 70
WNR+G+QMRF+ TLA +PDA++HYR ELLR+IAQMGLG+G L V+GGTVAIVGFL MTT
Sbjct 24 WNRIGAQMRFYAETLAAVPDAVVHYRTELLRLIAQMGLGSGALVVVGGTVAIVGFLTMTT 83
Query 71 GAIVAVQGYNQFASVGVEALTGFASAFFNTREIQPGTVMVALAATVGAGTTAALGAMRIN 130
GA+VAVQGYNQ ASVG EALTGFASAFFN R I PGT VAL+AT+GA TA LGAMRIN
Sbjct 84 GALVAVQGYNQLASVGFEALTGFASAFFNVRLIVPGTTSVALSATIGAAATAQLGAMRIN 143
Query 131 EEIDALEVIGIRSISYLASTRVLAGVVVAVPLFCVGLMTAYLAARVGTTAIYGQGSGVYD 190
EEIDALEVIGIRS++YLA+TRVLAGV+V +PL+CV +M A+LAAR GTT IYGQGSGVYD
Sbjct 144 EEIDALEVIGIRSVTYLAATRVLAGVIVVIPLYCVAVMMAFLAARFGTTVIYGQGSGVYD 203
Query 191 HYFNTFLRPTDVLWSSVEVVVVALMIMLVCTYYGYAAHGGPAGVGEAVGRAVRASMVVAS 250
HYF TFL PTD++WS + V + ++IMLV TYYG+ A GGPAGVGEAVGRAVR SMVVAS
Sbjct 204 HYFGTFLSPTDLIWSFFQCVAMTVVIMLVHTYYGFTASGGPAGVGEAVGRAVRTSMVVAS 263
Query 251 IAILVMTLAIYGQSPNFHLA 270
+ I++++LA+YGQS NF+LA
Sbjct 264 VEIVMISLAVYGQSGNFNLA 283
>gi|118472034|ref|YP_884758.1| hypothetical protein MSMEG_0345 [Mycobacterium smegmatis str.
MC2 155]
gi|118173321|gb|ABK74217.1| conserved hypothetical protein [Mycobacterium smegmatis str.
MC2 155]
Length=272
Score = 369 bits (946), Expect = 4e-100, Method: Compositional matrix adjust.
Identities = 181/260 (70%), Positives = 219/260 (85%), Gaps = 0/260 (0%)
Query 11 WNRMGSQMRFFVGTLAGIPDALMHYRGELLRVIAQMGLGTGVLAVIGGTVAIVGFLAMTT 70
W+ +G Q +F+ + I DA M+YR EL+R+IA MGLG G LAV+GGTVAIVGFL MTT
Sbjct 12 WDGIGVQTQFYARAIGSIGDAAMNYRTELIRLIATMGLGAGALAVVGGTVAIVGFLTMTT 71
Query 71 GAIVAVQGYNQFASVGVEALTGFASAFFNTREIQPGTVMVALAATVGAGTTAALGAMRIN 130
GA+VAVQGYNQFASVGVEALTGFASAFFN R I PGT VAL+AT+GAG TA LGAMRIN
Sbjct 72 GALVAVQGYNQFASVGVEALTGFASAFFNVRLIAPGTTAVALSATIGAGATAQLGAMRIN 131
Query 131 EEIDALEVIGIRSISYLASTRVLAGVVVAVPLFCVGLMTAYLAARVGTTAIYGQGSGVYD 190
EEIDALEVIGIRS+SYLASTRV AGV+V +PL+CV ++ +++++R+GTT IYGQGSGVYD
Sbjct 132 EEIDALEVIGIRSVSYLASTRVAAGVIVVIPLYCVAVIMSFISSRLGTTVIYGQGSGVYD 191
Query 191 HYFNTFLRPTDVLWSSVEVVVVALMIMLVCTYYGYAAHGGPAGVGEAVGRAVRASMVVAS 250
HYFNTFL D+LWS + V + ++IMLV TYYGY A GGPAGVGEAVGRAVR S++VA+
Sbjct 192 HYFNTFLNTNDLLWSFGQSVAITVVIMLVHTYYGYTASGGPAGVGEAVGRAVRTSLIVAA 251
Query 251 IAILVMTLAIYGQSPNFHLA 270
I +++++LA+YGQS NFHLA
Sbjct 252 IVVVMISLALYGQSGNFHLA 271
>gi|118619126|ref|YP_907458.1| integral membrane protein YrbE3B_1 [Mycobacterium ulcerans Agy99]
gi|183984021|ref|YP_001852312.1| integral membrane protein YrbE3B_1 [Mycobacterium marinum M]
gi|118571236|gb|ABL05987.1| conserved hypothetical integral membrane protein YrbE3B_1 [Mycobacterium
ulcerans Agy99]
gi|183177347|gb|ACC42457.1| conserved hypothetical integral membrane protein YrbE3B_1 [Mycobacterium
marinum M]
Length=284
Score = 347 bits (891), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 167/263 (64%), Positives = 219/263 (84%), Gaps = 0/263 (0%)
Query 8 VSEWNRMGSQMRFFVGTLAGIPDALMHYRGELLRVIAQMGLGTGVLAVIGGTVAIVGFLA 67
V+ WN++G+Q +FF TL I L+HYR EL+R+IAQMGLG G L VIGGTVAIVGFL
Sbjct 21 VAGWNQIGTQTKFFGRTLRSIHYMLIHYRVELIRLIAQMGLGAGALMVIGGTVAIVGFLT 80
Query 68 MTTGAIVAVQGYNQFASVGVEALTGFASAFFNTREIQPGTVMVALAATVGAGTTAALGAM 127
+TTGA+VAVQGY+ F+ +GVEALTGFASAFFN R I P T +AL+AT+GAG TA LGAM
Sbjct 81 VTTGALVAVQGYSDFSELGVEALTGFASAFFNVRLIAPATTAIALSATIGAGATAQLGAM 140
Query 128 RINEEIDALEVIGIRSISYLASTRVLAGVVVAVPLFCVGLMTAYLAARVGTTAIYGQGSG 187
RIN+EIDALEV+GIR+I++LA++RV+AG++V +PL+CVG++ ++ AAR GTT +Y Q +G
Sbjct 141 RINDEIDALEVMGIRTIAFLAASRVVAGLLVVIPLYCVGVLASFWAARFGTTVLYSQATG 200
Query 188 VYDHYFNTFLRPTDVLWSSVEVVVVALMIMLVCTYYGYAAHGGPAGVGEAVGRAVRASMV 247
VYDHYF TFL PTD++WS V+ + ++L+IMLV TYYGY A GGPAGVGEAVGRAVR S++
Sbjct 201 VYDHYFRTFLNPTDLVWSFVQCIALSLVIMLVHTYYGYTARGGPAGVGEAVGRAVRTSLI 260
Query 248 VASIAILVMTLAIYGQSPNFHLA 270
++ +++++LA+YGQS NF+LA
Sbjct 261 FSAFVLVMISLAVYGQSGNFNLA 283
>gi|120405557|ref|YP_955386.1| hypothetical protein Mvan_4605 [Mycobacterium vanbaalenii PYR-1]
gi|119958375|gb|ABM15380.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii
PYR-1]
Length=284
Score = 342 bits (876), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 165/262 (63%), Positives = 212/262 (81%), Gaps = 0/262 (0%)
Query 9 SEWNRMGSQMRFFVGTLAGIPDALMHYRGELLRVIAQMGLGTGVLAVIGGTVAIVGFLAM 68
WN +G+Q +F+ TL + HY EL+R+IAQMGLG G L VIGGTVAIVGFL +
Sbjct 22 DPWNHIGTQTKFYGRTLRSVGYVFTHYGVELIRIIAQMGLGAGALIVIGGTVAIVGFLTV 81
Query 69 TTGAIVAVQGYNQFASVGVEALTGFASAFFNTREIQPGTVMVALAATVGAGTTAALGAMR 128
TTGA+VAVQGY+ F+ +GVEALTGF SA+FN R I P T +AL+AT+GAG TA LGAMR
Sbjct 82 TTGALVAVQGYSDFSELGVEALTGFVSAYFNVRLIAPATTAIALSATIGAGATAQLGAMR 141
Query 129 INEEIDALEVIGIRSISYLASTRVLAGVVVAVPLFCVGLMTAYLAARVGTTAIYGQGSGV 188
INEEIDALEV+GIRSI++LAS+RV+AG +V +PL+CVG++ A+ AAR GTT IYGQ +GV
Sbjct 142 INEEIDALEVMGIRSIAFLASSRVIAGFLVVIPLYCVGVLMAFWAARFGTTVIYGQSTGV 201
Query 189 YDHYFNTFLRPTDVLWSSVEVVVVALMIMLVCTYYGYAAHGGPAGVGEAVGRAVRASMVV 248
YDHYF TFL PTD++WS + + ++++IMLV TYYGY A GGPAGVGEAVGRAVR S++V
Sbjct 202 YDHYFKTFLNPTDLMWSFGQCIALSVIIMLVHTYYGYTARGGPAGVGEAVGRAVRTSLIV 261
Query 249 ASIAILVMTLAIYGQSPNFHLA 270
++ +++++LA+YGQS NF+LA
Sbjct 262 SAFVLVMLSLAVYGQSGNFNLA 283
>gi|254820120|ref|ZP_05225121.1| hypothetical protein MintA_09346 [Mycobacterium intracellulare
ATCC 13950]
Length=286
Score = 338 bits (868), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 164/263 (63%), Positives = 212/263 (81%), Gaps = 0/263 (0%)
Query 8 VSEWNRMGSQMRFFVGTLAGIPDALMHYRGELLRVIAQMGLGTGVLAVIGGTVAIVGFLA 67
V+ W R+G+Q RF+ TL I DAL Y+ E LR+IA+MGLG G LAVIGGTV IVGFL
Sbjct 22 VAGWRRIGAQARFYARTLGAIRDALSSYKHETLRMIAEMGLGAGALAVIGGTVGIVGFLT 81
Query 68 MTTGAIVAVQGYNQFASVGVEALTGFASAFFNTREIQPGTVMVALAATVGAGTTAALGAM 127
++ G++V +QGY+ + +GVEALTGF SA+ N R + P T ++ L+AT+GAGTTA LGAM
Sbjct 82 LSGGSLVTIQGYSSLSGIGVEALTGFVSAYVNGRIVTPLTAVIGLSATIGAGTTAQLGAM 141
Query 128 RINEEIDALEVIGIRSISYLASTRVLAGVVVAVPLFCVGLMTAYLAARVGTTAIYGQGSG 187
RINEEIDALEV+GIRSI+YL STRV+AGVVV +PL+C+GL ++ AAR TT++YGQ +G
Sbjct 142 RINEEIDALEVMGIRSIAYLVSTRVIAGVVVVIPLYCIGLWMSFYAARFATTSVYGQPTG 201
Query 188 VYDHYFNTFLRPTDVLWSSVEVVVVALMIMLVCTYYGYAAHGGPAGVGEAVGRAVRASMV 247
VYDHYF+TFL+PTD++WS ++ V++ L++MLV TYYGY A GGPAGVGEAVGRAVR+SMV
Sbjct 202 VYDHYFSTFLQPTDIIWSLLQAVLMGLVVMLVHTYYGYTASGGPAGVGEAVGRAVRSSMV 261
Query 248 VASIAILVMTLAIYGQSPNFHLA 270
A + IL +LAIYG++ NFH +
Sbjct 262 SAVLVILFSSLAIYGKTGNFHFS 284
>gi|126436761|ref|YP_001072452.1| hypothetical protein Mjls_4189 [Mycobacterium sp. JLS]
gi|126236561|gb|ABN99961.1| protein of unknown function DUF140 [Mycobacterium sp. JLS]
Length=285
Score = 332 bits (852), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 157/263 (60%), Positives = 210/263 (80%), Gaps = 0/263 (0%)
Query 8 VSEWNRMGSQMRFFVGTLAGIPDALMHYRGELLRVIAQMGLGTGVLAVIGGTVAIVGFLA 67
V+ W R+G+Q RF+ TL + +AL++YRGE LR+IAQMGLG G LA+IGGTV IVGFL
Sbjct 21 VAGWRRIGAQARFYAKTLGAMWEALVYYRGETLRMIAQMGLGAGALAMIGGTVGIVGFLT 80
Query 68 MTTGAIVAVQGYNQFASVGVEALTGFASAFFNTREIQPGTVMVALAATVGAGTTAALGAM 127
+T G++V +QGY+ + +GVEALTGF SA+ N R + P T +++L+AT+GAGTTA LGAM
Sbjct 81 LTAGSLVTIQGYSSLSDIGVEALTGFVSAYVNGRIVTPLTAVISLSATIGAGTTAQLGAM 140
Query 128 RINEEIDALEVIGIRSISYLASTRVLAGVVVAVPLFCVGLMTAYLAARVGTTAIYGQGSG 187
RINEEIDALEV+GIRS++YLASTRV+AGV+V +PL+C+ + ++++AR TT YGQ +G
Sbjct 141 RINEEIDALEVMGIRSVAYLASTRVIAGVIVVIPLYCIAVWMSFMSARFATTVYYGQATG 200
Query 188 VYDHYFNTFLRPTDVLWSSVEVVVVALMIMLVCTYYGYAAHGGPAGVGEAVGRAVRASMV 247
+YDHYF+TFL+P+D+LWS + V++ ++MLV TYYG+ A GGPAGVGEAVGRAVR S++
Sbjct 201 IYDHYFSTFLQPSDILWSLFQAVLMGFVVMLVHTYYGFTASGGPAGVGEAVGRAVRTSLI 260
Query 248 VASIAILVMTLAIYGQSPNFHLA 270
A IL +LAIYGQS NF +
Sbjct 261 AAVFVILFASLAIYGQSGNFQFS 283
>gi|145222688|ref|YP_001133366.1| hypothetical protein Mflv_2100 [Mycobacterium gilvum PYR-GCK]
gi|315443152|ref|YP_004076031.1| ABC transporter involved in resistance to organic solvents, permease
[Mycobacterium sp. Spyr1]
gi|145215174|gb|ABP44578.1| protein of unknown function DUF140 [Mycobacterium gilvum PYR-GCK]
gi|315261455|gb|ADT98196.1| ABC-type transport system involved in resistance to organic solvents,
permease component [Mycobacterium sp. Spyr1]
Length=284
Score = 323 bits (827), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 172/266 (65%), Positives = 219/266 (83%), Gaps = 0/266 (0%)
Query 5 KALVSEWNRMGSQMRFFVGTLAGIPDALMHYRGELLRVIAQMGLGTGVLAVIGGTVAIVG 64
+++ WN++G Q +F+ TL I A+ YR EL+R IAQMGLG G L VIGGTVAIVG
Sbjct 18 RSIADPWNQVGVQTKFYGRTLRSIVIAVTRYRIELVRQIAQMGLGAGALIVIGGTVAIVG 77
Query 65 FLAMTTGAIVAVQGYNQFASVGVEALTGFASAFFNTREIQPGTVMVALAATVGAGTTAAL 124
FL +TTGA+VAVQGY F+ +GVEALTGFASAFFN R I P T VALAAT+GAG TA L
Sbjct 78 FLTVTTGALVAVQGYTDFSEIGVEALTGFASAFFNVRLIAPATTAVALAATIGAGATAQL 137
Query 125 GAMRINEEIDALEVIGIRSISYLASTRVLAGVVVAVPLFCVGLMTAYLAARVGTTAIYGQ 184
GAMRINEEIDALEV+GIRS++YLASTRVLAG++V +PL+CVG++ ++ AAR GTT IYGQ
Sbjct 138 GAMRINEEIDALEVMGIRSVAYLASTRVLAGLLVVIPLYCVGVLASFWAARFGTTVIYGQ 197
Query 185 GSGVYDHYFNTFLRPTDVLWSSVEVVVVALMIMLVCTYYGYAAHGGPAGVGEAVGRAVRA 244
+GVYDHYF TFL PTD++WS + +V+A++IMLV TYYG++A GGPAGVGEAVGRAVR
Sbjct 198 STGVYDHYFRTFLNPTDLVWSFAQCIVLAIVIMLVHTYYGFSARGGPAGVGEAVGRAVRT 257
Query 245 SMVVASIAILVMTLAIYGQSPNFHLA 270
S+++++ +++++LA+YGQS NF+LA
Sbjct 258 SLILSAFVLVMISLAVYGQSGNFNLA 283
>gi|120401936|ref|YP_951765.1| hypothetical protein Mvan_0921 [Mycobacterium vanbaalenii PYR-1]
gi|119954754|gb|ABM11759.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii
PYR-1]
Length=284
Score = 318 bits (814), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 164/264 (63%), Positives = 212/264 (81%), Gaps = 0/264 (0%)
Query 7 LVSEWNRMGSQMRFFVGTLAGIPDALMHYRGELLRVIAQMGLGTGVLAVIGGTVAIVGFL 66
L + WNR+G+Q F+ T+ I DA++HYR E+ IAQM LGTG LAV+GGT+ IVGFL
Sbjct 20 LAAGWNRIGTQTEFYGRTVRSIGDAVVHYRTEIAVQIAQMSLGTGALAVVGGTIVIVGFL 79
Query 67 AMTTGAIVAVQGYNQFASVGVEALTGFASAFFNTREIQPGTVMVALAATVGAGTTAALGA 126
M+ GA++AVQGYN A VGVEALTGFASA+ N R I P T + LAAT+GAG TA LGA
Sbjct 80 TMSAGALIAVQGYNTLAGVGVEALTGFASAYLNVRIIGPLTTGIGLAATIGAGATAQLGA 139
Query 127 MRINEEIDALEVIGIRSISYLASTRVLAGVVVAVPLFCVGLMTAYLAARVGTTAIYGQGS 186
MRI EEIDALEV+G+RSI+YLASTR+LAG++V +PL+CV ++ +++AARVGTTAIYGQ +
Sbjct 140 MRIAEEIDALEVMGVRSIAYLASTRLLAGMIVVIPLYCVAVLMSFVAARVGTTAIYGQST 199
Query 187 GVYDHYFNTFLRPTDVLWSSVEVVVVALMIMLVCTYYGYAAHGGPAGVGEAVGRAVRASM 246
GVYDHYF TFL P D++WS V+ + +A+ +M++ TYYG+ A GGPAGVGEAVGRAVRAS+
Sbjct 200 GVYDHYFTTFLNPLDLVWSFVQAIAMAVTVMVIHTYYGFNASGGPAGVGEAVGRAVRASL 259
Query 247 VVASIAILVMTLAIYGQSPNFHLA 270
+V LV++L++YGQS NF+L+
Sbjct 260 IVVVFVTLVISLSVYGQSGNFNLS 283
>gi|342857629|ref|ZP_08714285.1| hypothetical protein MCOL_02095 [Mycobacterium colombiense CECT
3035]
gi|342134962|gb|EGT88128.1| hypothetical protein MCOL_02095 [Mycobacterium colombiense CECT
3035]
Length=283
Score = 316 bits (810), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 168/268 (63%), Positives = 208/268 (78%), Gaps = 1/268 (0%)
Query 3 AAKALVSEWNRMGSQMRFFVGTLAGIPDALMHYRGELLRVIAQMGLGTGVLAVIGGTVAI 62
+ K +EWN +G Q +F+ TL DAL +Y+ E+LR+IAQM LGTG L ++GGTV I
Sbjct 16 SVKRFAAEWNLVGLQTQFYASTLRSTSDALRNYKVEVLRLIAQMALGTGALVLVGGTVVI 75
Query 63 VGFLAMTTGAIVAVQGYNQFASVGVEALTGFASAFFNTREIQPGTVMVALAATVGAGTTA 122
VGFL ++ GA+VAVQGYN A+VGV+AL GF SA+ N R P V LAAT+GAG TA
Sbjct 76 VGFLTLSAGALVAVQGYNALANVGVDALVGFVSAYVNVRLSGPLIATVGLAATIGAGATA 135
Query 123 ALGAMRINEEIDALEVIGIRSISYLASTRVLAGVVVAVPLFCVGLMTAYLAARVGTTAIY 182
LGAMRINEEIDALEV+G+RS+SYLAS+RVLAGVVV +PL+CV L+T+++A++ A+Y
Sbjct 136 QLGAMRINEEIDALEVMGVRSVSYLASSRVLAGVVVVIPLYCVALLTSFVASQ-SVVAVY 194
Query 183 GQGSGVYDHYFNTFLRPTDVLWSSVEVVVVALMIMLVCTYYGYAAHGGPAGVGEAVGRAV 242
GQ SGVY HYFNTFL PTD+LWS + V+V +++MLV TYYGY A GGPAGVGEAVGRAV
Sbjct 195 GQSSGVYSHYFNTFLNPTDMLWSVLLVIVSGVVVMLVHTYYGYTATGGPAGVGEAVGRAV 254
Query 243 RASMVVASIAILVMTLAIYGQSPNFHLA 270
RAS+VVA IL +LAIYG + NFHLA
Sbjct 255 RASLVVAVFVILFASLAIYGHTGNFHLA 282
>gi|120405353|ref|YP_955182.1| hypothetical protein Mvan_4400 [Mycobacterium vanbaalenii PYR-1]
gi|119958171|gb|ABM15176.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii
PYR-1]
Length=281
Score = 315 bits (808), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 160/267 (60%), Positives = 207/267 (78%), Gaps = 4/267 (1%)
Query 8 VSEW----NRMGSQMRFFVGTLAGIPDALMHYRGELLRVIAQMGLGTGVLAVIGGTVAIV 63
+S+W +R+G Q F+ TL DA +HYR E+LR IAQMG G G LA IGGTV IV
Sbjct 14 LSQWAAGLDRLGLQTLFYGHTLRSTGDAAIHYRAEILRQIAQMGFGVGALAAIGGTVVIV 73
Query 64 GFLAMTTGAIVAVQGYNQFASVGVEALTGFASAFFNTREIQPGTVMVALAATVGAGTTAA 123
FL ++ GA+VAV G+NQ + VGVEALTGF SAFFN R I P +ALAAT+GAGTTA
Sbjct 74 SFLTVSVGALVAVIGFNQLSQVGVEALTGFISAFFNVRLIGPLIAGIALAATIGAGTTAQ 133
Query 124 LGAMRINEEIDALEVIGIRSISYLASTRVLAGVVVAVPLFCVGLMTAYLAARVGTTAIYG 183
LGAMRINEEIDALEV+G+RS+SYLASTR++AG +V VPL+CV L++A++AA+VGTT YG
Sbjct 134 LGAMRINEEIDALEVMGVRSVSYLASTRLIAGTLVVVPLYCVALISAFVAAKVGTTVFYG 193
Query 184 QGSGVYDHYFNTFLRPTDVLWSSVEVVVVALMIMLVCTYYGYAAHGGPAGVGEAVGRAVR 243
Q GVY+HYF TFL P V+WS + V +A++IMLV TYYG+ A GGPAGVG+AVG++VR
Sbjct 194 QSVGVYEHYFYTFLNPDSVVWSFLLAVTMAVVIMLVHTYYGFNAAGGPAGVGQAVGQSVR 253
Query 244 ASMVVASIAILVMTLAIYGQSPNFHLA 270
AS+V A++ + ++LA+YGQ+ +F+ +
Sbjct 254 ASLVAATVMTMFVSLALYGQTGDFNFS 280
>gi|108798493|ref|YP_638690.1| hypothetical protein Mmcs_1523 [Mycobacterium sp. MCS]
gi|108768912|gb|ABG07634.1| protein of unknown function DUF140 [Mycobacterium sp. MCS]
Length=272
Score = 312 bits (799), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 168/259 (65%), Positives = 211/259 (82%), Gaps = 0/259 (0%)
Query 12 NRMGSQMRFFVGTLAGIPDALMHYRGELLRVIAQMGLGTGVLAVIGGTVAIVGFLAMTTG 71
+R+G+Q +F+ TL D ++HY+ EL R++AQM LG G LAV+GGTV IVGFL ++TG
Sbjct 13 SRIGTQAQFYFQTLGSTKDVVIHYKVELFRLVAQMSLGVGALAVVGGTVVIVGFLTLSTG 72
Query 72 AIVAVQGYNQFASVGVEALTGFASAFFNTREIQPGTVMVALAATVGAGTTAALGAMRINE 131
A+VAVQGYNQFA VGVEALTGFASA+FN R I P + LAAT+GAG TA LGAMRINE
Sbjct 73 ALVAVQGYNQFADVGVEALTGFASAYFNVRLIGPVIAGIGLAATIGAGATAQLGAMRINE 132
Query 132 EIDALEVIGIRSISYLASTRVLAGVVVAVPLFCVGLMTAYLAARVGTTAIYGQGSGVYDH 191
EIDALEV+G+RS++YLAS+RVLAGV+V +PL+CV +++A+ AAR GT AIYGQ SGVYDH
Sbjct 133 EIDALEVMGVRSVAYLASSRVLAGVIVVIPLYCVAVLSAFWAARFGTIAIYGQSSGVYDH 192
Query 192 YFNTFLRPTDVLWSSVEVVVVALMIMLVCTYYGYAAHGGPAGVGEAVGRAVRASMVVASI 251
YF TFL TD++WS + + +A++IMLV TYYG+ A GGPAGVGEAVGRAVR S++ A +
Sbjct 193 YFTTFLNSTDIIWSFFQAIAMAIVIMLVHTYYGFTATGGPAGVGEAVGRAVRTSLIAAVL 252
Query 252 AILVMTLAIYGQSPNFHLA 270
+L ++LAIYGQS NFHLA
Sbjct 253 VVLFLSLAIYGQSGNFHLA 271
>gi|119867594|ref|YP_937546.1| hypothetical protein Mkms_1546 [Mycobacterium sp. KMS]
gi|119693683|gb|ABL90756.1| protein of unknown function DUF140 [Mycobacterium sp. KMS]
Length=284
Score = 311 bits (797), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 168/259 (65%), Positives = 211/259 (82%), Gaps = 0/259 (0%)
Query 12 NRMGSQMRFFVGTLAGIPDALMHYRGELLRVIAQMGLGTGVLAVIGGTVAIVGFLAMTTG 71
+R+G+Q +F+ TL D ++HY+ EL R++AQM LG G LAV+GGTV IVGFL ++TG
Sbjct 25 SRIGTQAQFYFQTLGSTKDVVIHYKVELFRLVAQMSLGVGALAVVGGTVVIVGFLTLSTG 84
Query 72 AIVAVQGYNQFASVGVEALTGFASAFFNTREIQPGTVMVALAATVGAGTTAALGAMRINE 131
A+VAVQGYNQFA VGVEALTGFASA+FN R I P + LAAT+GAG TA LGAMRINE
Sbjct 85 ALVAVQGYNQFADVGVEALTGFASAYFNVRLIGPVIAGIGLAATIGAGATAQLGAMRINE 144
Query 132 EIDALEVIGIRSISYLASTRVLAGVVVAVPLFCVGLMTAYLAARVGTTAIYGQGSGVYDH 191
EIDALEV+G+RS++YLAS+RVLAGV+V +PL+CV +++A+ AAR GT AIYGQ SGVYDH
Sbjct 145 EIDALEVMGVRSVAYLASSRVLAGVIVVIPLYCVAVLSAFWAARFGTIAIYGQSSGVYDH 204
Query 192 YFNTFLRPTDVLWSSVEVVVVALMIMLVCTYYGYAAHGGPAGVGEAVGRAVRASMVVASI 251
YF TFL TD++WS + + +A++IMLV TYYG+ A GGPAGVGEAVGRAVR S++ A +
Sbjct 205 YFTTFLNSTDIIWSFFQAIAMAIVIMLVHTYYGFTATGGPAGVGEAVGRAVRTSLIAAVL 264
Query 252 AILVMTLAIYGQSPNFHLA 270
+L ++LAIYGQS NFHLA
Sbjct 265 VVLFLSLAIYGQSGNFHLA 283
>gi|126436743|ref|YP_001072434.1| hypothetical protein Mjls_4171 [Mycobacterium sp. JLS]
gi|126236543|gb|ABN99943.1| protein of unknown function DUF140 [Mycobacterium sp. JLS]
Length=284
Score = 306 bits (785), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 156/263 (60%), Positives = 208/263 (80%), Gaps = 0/263 (0%)
Query 8 VSEWNRMGSQMRFFVGTLAGIPDALMHYRGELLRVIAQMGLGTGVLAVIGGTVAIVGFLA 67
V+ WNR+G+Q +F+ T+ GI DA++HYR E++R+IAQM LG G LAVIGGT+ IVGFL
Sbjct 21 VNGWNRIGTQTQFYGETIKGIWDAVVHYRTEVVRLIAQMSLGVGALAVIGGTIVIVGFLT 80
Query 68 MTTGAIVAVQGYNQFASVGVEALTGFASAFFNTREIQPGTVMVALAATVGAGTTAALGAM 127
++ G+++AVQ Y+Q VGVEAL GF SAF N R + P + LAAT+GAG TA LGAM
Sbjct 81 LSAGSLIAVQAYSQLQQVGVEALAGFTSAFLNVRLVSPLVAGIGLAATIGAGATAQLGAM 140
Query 128 RINEEIDALEVIGIRSISYLASTRVLAGVVVAVPLFCVGLMTAYLAARVGTTAIYGQGSG 187
RI+EE+DALEV+GIRS++YLAS+RVLAGV+V +PL+C+ ++ A+ A R GTT +YGQ +G
Sbjct 141 RISEEVDALEVMGIRSVAYLASSRVLAGVIVVIPLYCIAVLAAFAATRTGTTLVYGQSTG 200
Query 188 VYDHYFNTFLRPTDVLWSSVEVVVVALMIMLVCTYYGYAAHGGPAGVGEAVGRAVRASMV 247
VYDHYF TFL PTD+++S ++ + +A+++MLV TYYG+ A GGPAGVGEAVGRAVR S+V
Sbjct 201 VYDHYFYTFLNPTDLIYSFLQAISMAVVVMLVHTYYGFTATGGPAGVGEAVGRAVRTSLV 260
Query 248 VASIAILVMTLAIYGQSPNFHLA 270
A L ++LAIYGQS N +L+
Sbjct 261 AAVFVTLFVSLAIYGQSGNLNLS 283
>gi|254774785|ref|ZP_05216301.1| TrnB2 protein [Mycobacterium avium subsp. avium ATCC 25291]
Length=282
Score = 304 bits (778), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 156/264 (60%), Positives = 210/264 (80%), Gaps = 0/264 (0%)
Query 7 LVSEWNRMGSQMRFFVGTLAGIPDALMHYRGELLRVIAQMGLGTGVLAVIGGTVAIVGFL 66
LV ++G Q F+ +LA I DA+ Y GELLR+IA+MG+GTG LAVIGGTV I+GFL
Sbjct 18 LVESTRKLGEQTVFYGQSLAAIADAIRRYPGELLRLIAEMGMGTGALAVIGGTVGIIGFL 77
Query 67 AMTTGAIVAVQGYNQFASVGVEALTGFASAFFNTREIQPGTVMVALAATVGAGTTAALGA 126
+TTGA+VAVQGY+ +++GVEALTGF SAF N R I P T +ALAAT+GAG TA LGA
Sbjct 78 TLTTGALVAVQGYDTLSNIGVEALTGFLSAFLNVRMIAPCTAGLALAATIGAGATAQLGA 137
Query 127 MRINEEIDALEVIGIRSISYLASTRVLAGVVVAVPLFCVGLMTAYLAARVGTTAIYGQGS 186
MRINEEIDALEV+GIR+++YLASTR++AG++V +PL+ V ++ +++AA++ T +YGQ
Sbjct 138 MRINEEIDALEVMGIRAVTYLASTRIIAGILVVIPLYAVAVLMSFIAAKLLTIYVYGQSK 197
Query 187 GVYDHYFNTFLRPTDVLWSSVEVVVVALMIMLVCTYYGYAAHGGPAGVGEAVGRAVRASM 246
GVY+HYF+TFLRP D+LWS + +A +M+V TYYG+ A GGPAGVGEAVGR+VR+SM
Sbjct 198 GVYEHYFSTFLRPNDLLWSFFSALAMATGVMVVHTYYGFTATGGPAGVGEAVGRSVRSSM 257
Query 247 VVASIAILVMTLAIYGQSPNFHLA 270
+V + L+++L++YGQS NF+L+
Sbjct 258 IVTAFVCLMISLSVYGQSGNFNLS 281
>gi|118465348|ref|YP_881277.1| TrnB2 protein [Mycobacterium avium 104]
gi|118166635|gb|ABK67532.1| TrnB2 protein [Mycobacterium avium 104]
gi|336461660|gb|EGO40523.1| ABC-type transport system involved in resistance to organic solvents,
permease component [Mycobacterium avium subsp. paratuberculosis
S397]
Length=282
Score = 302 bits (774), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 155/264 (59%), Positives = 209/264 (80%), Gaps = 0/264 (0%)
Query 7 LVSEWNRMGSQMRFFVGTLAGIPDALMHYRGELLRVIAQMGLGTGVLAVIGGTVAIVGFL 66
LV ++G Q F+ +L I DA+ Y GELLR+IA+MG+GTG LAVIGGTV I+GFL
Sbjct 18 LVESTRKLGEQTVFYGQSLTAIADAIRRYPGELLRLIAEMGMGTGALAVIGGTVGIIGFL 77
Query 67 AMTTGAIVAVQGYNQFASVGVEALTGFASAFFNTREIQPGTVMVALAATVGAGTTAALGA 126
+TTGA+VAVQGY+ +++GVEALTGF SAF N R I P T +ALAAT+GAG TA LGA
Sbjct 78 TLTTGALVAVQGYDTLSNIGVEALTGFLSAFLNVRMIAPCTAGLALAATIGAGATAQLGA 137
Query 127 MRINEEIDALEVIGIRSISYLASTRVLAGVVVAVPLFCVGLMTAYLAARVGTTAIYGQGS 186
MRINEEIDALEV+GIR+++YLASTR++AG++V +PL+ V ++ +++AA++ T +YGQ
Sbjct 138 MRINEEIDALEVMGIRAVTYLASTRIIAGILVVIPLYAVAVLMSFIAAKLLTIYVYGQSK 197
Query 187 GVYDHYFNTFLRPTDVLWSSVEVVVVALMIMLVCTYYGYAAHGGPAGVGEAVGRAVRASM 246
GVY+HYF+TFLRP D+LWS + +A +M+V TYYG+ A GGPAGVGEAVGR+VR+SM
Sbjct 198 GVYEHYFSTFLRPNDLLWSFFSALAMATGVMVVHTYYGFTATGGPAGVGEAVGRSVRSSM 257
Query 247 VVASIAILVMTLAIYGQSPNFHLA 270
+V + L+++L++YGQS NF+L+
Sbjct 258 IVTAFVCLMISLSVYGQSGNFNLS 281
>gi|296171120|ref|ZP_06852573.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295894376|gb|EFG74129.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Mycobacterium parascrofulaceum ATCC BAA-614]
Length=284
Score = 296 bits (759), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 153/268 (58%), Positives = 205/268 (77%), Gaps = 0/268 (0%)
Query 3 AAKALVSEWNRMGSQMRFFVGTLAGIPDALMHYRGELLRVIAQMGLGTGVLAVIGGTVAI 62
AA + + WNR+G+Q++F+ + + A + Y E++R++AQM LGTG LAVIGGTV I
Sbjct 16 AAGRVAAGWNRVGAQVKFYATAVTEMRTAFLRYWKEIIRLVAQMSLGTGALAVIGGTVVI 75
Query 63 VGFLAMTTGAIVAVQGYNQFASVGVEALTGFASAFFNTREIQPGTVMVALAATVGAGTTA 122
VGFL ++TGA++AVQGYNQ + +GVEA+TGF SA+ N R I P V LAAT+GAG TA
Sbjct 76 VGFLTLSTGAVIAVQGYNQLSGIGVEAMTGFISAYVNVRIISPAVAGVGLAATIGAGATA 135
Query 123 ALGAMRINEEIDALEVIGIRSISYLASTRVLAGVVVAVPLFCVGLMTAYLAARVGTTAIY 182
LGAMRI +EIDALEV+ +RS++YL STRV AGVVV +PL+CV ++ A+ AAR GTT IY
Sbjct 136 QLGAMRIADEIDALEVMAVRSVAYLVSTRVAAGVVVVIPLYCVAVVCAFQAARFGTTGIY 195
Query 183 GQGSGVYDHYFNTFLRPTDVLWSSVEVVVVALMIMLVCTYYGYAAHGGPAGVGEAVGRAV 242
GQ +GVYDHYF TFL D+LWS V V+ A+ +MLV TYYGY A GGPAGVG AVG +V
Sbjct 196 GQSTGVYDHYFRTFLNSIDLLWSFVTVIAAAIAVMLVHTYYGYNASGGPAGVGRAVGHSV 255
Query 243 RASMVVASIAILVMTLAIYGQSPNFHLA 270
R S++V ++ +L ++L+++GQS +F+L+
Sbjct 256 RTSLIVLTLIVLTVSLSVHGQSGHFNLS 283
>gi|342857465|ref|ZP_08714121.1| TrnB2 protein [Mycobacterium colombiense CECT 3035]
gi|342134798|gb|EGT87964.1| TrnB2 protein [Mycobacterium colombiense CECT 3035]
Length=282
Score = 296 bits (757), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 153/264 (58%), Positives = 206/264 (79%), Gaps = 0/264 (0%)
Query 7 LVSEWNRMGSQMRFFVGTLAGIPDALMHYRGELLRVIAQMGLGTGVLAVIGGTVAIVGFL 66
L ++G Q F+ +L DA+ Y GELLR+IA+MG+GTG LAVIGGTV I+GFL
Sbjct 18 LTGSTRKLGEQTAFYGQSLTATVDAIRRYPGELLRLIAEMGMGTGALAVIGGTVGIIGFL 77
Query 67 AMTTGAIVAVQGYNQFASVGVEALTGFASAFFNTREIQPGTVMVALAATVGAGTTAALGA 126
+TTGA+VAVQGY+ +++GVEALTGF SAF N R I P T +ALAAT+GAG TA LGA
Sbjct 78 TLTTGALVAVQGYDTLSNIGVEALTGFLSAFLNVRMIAPCTAGLALAATIGAGATAQLGA 137
Query 127 MRINEEIDALEVIGIRSISYLASTRVLAGVVVAVPLFCVGLMTAYLAARVGTTAIYGQGS 186
MRINEEIDALEV+GIR+++YLASTR++AG++V +PL+ V ++ +++AA+ T +YGQ
Sbjct 138 MRINEEIDALEVMGIRAVTYLASTRIIAGILVVIPLYAVAVLMSFIAAKFLTIYVYGQSR 197
Query 187 GVYDHYFNTFLRPTDVLWSSVEVVVVALMIMLVCTYYGYAAHGGPAGVGEAVGRAVRASM 246
GVY+HYF TFLRPTD+ WS + + +A +M+V TYYG+ A GGPAGVGEAVGR+VR+SM
Sbjct 198 GVYEHYFATFLRPTDLFWSFLAALTMAAGVMVVHTYYGFTATGGPAGVGEAVGRSVRSSM 257
Query 247 VVASIAILVMTLAIYGQSPNFHLA 270
+V + L+++L++YGQS NF+L+
Sbjct 258 IVTAFVCLMISLSVYGQSGNFNLS 281
>gi|240170712|ref|ZP_04749371.1| hypothetical protein MkanA1_15460 [Mycobacterium kansasii ATCC
12478]
Length=284
Score = 288 bits (737), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 157/267 (59%), Positives = 206/267 (78%), Gaps = 0/267 (0%)
Query 4 AKALVSEWNRMGSQMRFFVGTLAGIPDALMHYRGELLRVIAQMGLGTGVLAVIGGTVAIV 63
A LV+ WNR+G Q+ F+ T+A + A Y E+LR+IAQM LGTG LAVIGGTV IV
Sbjct 17 ASGLVAGWNRVGIQVAFYARTIAEMRTAFGRYGKEILRLIAQMSLGTGALAVIGGTVVIV 76
Query 64 GFLAMTTGAIVAVQGYNQFASVGVEALTGFASAFFNTREIQPGTVMVALAATVGAGTTAA 123
GFL ++TGA++AVQGYNQ + +GVEA+TGF SA+ N R I P V LAAT+GAG TA
Sbjct 77 GFLTLSTGAVIAVQGYNQLSGIGVEAMTGFISAYVNVRIISPAVAGVGLAATIGAGATAQ 136
Query 124 LGAMRINEEIDALEVIGIRSISYLASTRVLAGVVVAVPLFCVGLMTAYLAARVGTTAIYG 183
LGAMRI EEIDALEV+ +RS++YL STRV+AGVVV +PL+C+ ++ A+ AAR GTT +YG
Sbjct 137 LGAMRIAEEIDALEVMAVRSVAYLVSTRVVAGVVVVIPLYCIAVVCAFQAARFGTTGVYG 196
Query 184 QGSGVYDHYFNTFLRPTDVLWSSVEVVVVALMIMLVCTYYGYAAHGGPAGVGEAVGRAVR 243
Q +GVYDHYF TFL TD+LWS + V+ A+ IMLV T+YGY A GGPAGVG AVG +VR
Sbjct 197 QSTGVYDHYFRTFLNSTDLLWSFLTVIAAAIAIMLVHTHYGYTAKGGPAGVGAAVGHSVR 256
Query 244 ASMVVASIAILVMTLAIYGQSPNFHLA 270
S++V ++ +L ++L+++GQS +F+L+
Sbjct 257 TSLIVLTLIVLAISLSVHGQSGHFNLS 283
>gi|254819937|ref|ZP_05224938.1| TrnB2 protein [Mycobacterium intracellulare ATCC 13950]
Length=282
Score = 282 bits (722), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 155/264 (59%), Positives = 198/264 (75%), Gaps = 0/264 (0%)
Query 7 LVSEWNRMGSQMRFFVGTLAGIPDALMHYRGELLRVIAQMGLGTGVLAVIGGTVAIVGFL 66
LV+ WNR+GSQ F+V L+ + DA+ Y+ E LR+IA M LG G LA+IGGTV +V L
Sbjct 18 LVAGWNRLGSQTAFYVKALSLVWDAVARYKAETLRLIATMSLGIGALAIIGGTVVVVTTL 77
Query 67 AMTTGAIVAVQGYNQFASVGVEALTGFASAFFNTREIQPGTVMVALAATVGAGTTAALGA 126
M+TGA + +Q Y + VGVEAL+GFASA+ NTR P T + LAAT+GAG TA LGA
Sbjct 78 VMSTGAFIGIQLYRSLSDVGVEALSGFASAYLNTRFAAPLTSAIGLAATIGAGATAQLGA 137
Query 127 MRINEEIDALEVIGIRSISYLASTRVLAGVVVAVPLFCVGLMTAYLAARVGTTAIYGQGS 186
MRINEEIDALEV+GIR+ISYLASTR++AGV+V VPL+C+ + YLA R +GQ
Sbjct 138 MRINEEIDALEVMGIRAISYLASTRIVAGVLVTVPLWCLSSLAGYLATRTLVVVAFGQAP 197
Query 187 GVYDHYFNTFLRPTDVLWSSVEVVVVALMIMLVCTYYGYAAHGGPAGVGEAVGRAVRASM 246
GVYDHYFNT+L+PTD++WS ++V+ A ++MLV TYYG+ A GGPAGVGEAVGR+VRAS+
Sbjct 198 GVYDHYFNTYLQPTDLIWSLLQVIATATVVMLVHTYYGFNATGGPAGVGEAVGRSVRASL 257
Query 247 VVASIAILVMTLAIYGQSPNFHLA 270
VVA L + +A YG S NF+L+
Sbjct 258 VVAVTVQLAVAMAAYGVSGNFNLS 281
>gi|118466059|ref|YP_881723.1| TrnB2 protein [Mycobacterium avium 104]
gi|118167346|gb|ABK68243.1| TrnB2 protein [Mycobacterium avium 104]
Length=294
Score = 280 bits (716), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 155/264 (59%), Positives = 198/264 (75%), Gaps = 0/264 (0%)
Query 7 LVSEWNRMGSQMRFFVGTLAGIPDALMHYRGELLRVIAQMGLGTGVLAVIGGTVAIVGFL 66
LV+ WNR+GSQ F+V L+ + DA+ Y+ E LR+IA M LG G LAVIGGTV +V L
Sbjct 30 LVAGWNRLGSQTAFYVKALSLMWDAVARYKAETLRLIATMSLGVGALAVIGGTVVVVTTL 89
Query 67 AMTTGAIVAVQGYNQFASVGVEALTGFASAFFNTREIQPGTVMVALAATVGAGTTAALGA 126
M+TG+ + +Q Y + VGVEAL+GFASA+ NTR P T + LAAT+GAG TA LGA
Sbjct 90 VMSTGSFIGIQLYRSLSDVGVEALSGFASAYLNTRFAAPLTSAIGLAATIGAGATAQLGA 149
Query 127 MRINEEIDALEVIGIRSISYLASTRVLAGVVVAVPLFCVGLMTAYLAARVGTTAIYGQGS 186
MRINEEIDALEV+GIR+ISYLASTR++AGV+V VPL+C+ + YLA R +GQ
Sbjct 150 MRINEEIDALEVMGIRAISYLASTRIVAGVLVTVPLWCLSSLAGYLATRTLVVVAFGQAP 209
Query 187 GVYDHYFNTFLRPTDVLWSSVEVVVVALMIMLVCTYYGYAAHGGPAGVGEAVGRAVRASM 246
GVYDHYFNT+L+PTD++WS ++V+ A ++MLV TYYG+ A GGPAGVGEAVGR+VRAS+
Sbjct 210 GVYDHYFNTYLQPTDLIWSLLQVMATATVVMLVHTYYGFNATGGPAGVGEAVGRSVRASL 269
Query 247 VVASIAILVMTLAIYGQSPNFHLA 270
VVA L + +A YG S NF+L+
Sbjct 270 VVAVTVQLAVAMAAYGVSGNFNLS 293
>gi|108797254|ref|YP_637451.1| hypothetical protein Mmcs_0274 [Mycobacterium sp. MCS]
gi|119866339|ref|YP_936291.1| hypothetical protein Mkms_0284 [Mycobacterium sp. KMS]
gi|126432878|ref|YP_001068569.1| hypothetical protein Mjls_0265 [Mycobacterium sp. JLS]
gi|108767673|gb|ABG06395.1| protein of unknown function DUF140 [Mycobacterium sp. MCS]
gi|119692428|gb|ABL89501.1| protein of unknown function DUF140 [Mycobacterium sp. KMS]
gi|126232678|gb|ABN96078.1| protein of unknown function DUF140 [Mycobacterium sp. JLS]
Length=285
Score = 278 bits (710), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 137/276 (50%), Positives = 194/276 (71%), Gaps = 7/276 (2%)
Query 2 TAAKALVSEWN-------RMGSQMRFFVGTLAGIPDALMHYRGELLRVIAQMGLGTGVLA 54
TA +VS++ R+G + F+ LAG P A MHYR E++R+IA++ +G G LA
Sbjct 9 TAYPRVVSQFRKPASLVGRLGDHILFYGRALAGTPHAAMHYRKEIVRLIAEISMGAGTLA 68
Query 55 VIGGTVAIVGFLAMTTGAIVAVQGYNQFASVGVEALTGFASAFFNTREIQPGTVMVALAA 114
+IGGTV IVGFL + G +AVQGY+ +G+EALTGF +AF N R P + LAA
Sbjct 69 MIGGTVVIVGFLTLAAGGTLAVQGYSSLGDIGIEALTGFLAAFINVRISAPVVAGIGLAA 128
Query 115 TVGAGTTAALGAMRINEEIDALEVIGIRSISYLASTRVLAGVVVAVPLFCVGLMTAYLAA 174
T GAG TA LGAMRINEE+DALE +GIR I YL STR++AG++ PL+ V ++ ++LA+
Sbjct 129 TFGAGVTAQLGAMRINEEVDALETMGIRPIEYLVSTRIIAGMIAITPLYSVAVILSFLAS 188
Query 175 RVGTTAIYGQGSGVYDHYFNTFLRPTDVLWSSVEVVVVALMIMLVCTYYGYAAHGGPAGV 234
++ T ++GQ G+YDHYFNTFL P D+LWS ++ +++AL ++ + TY+GY A GGPAGV
Sbjct 189 QLTTVVLFGQSGGLYDHYFNTFLNPVDLLWSFLQAILMALTVLFIHTYFGYFATGGPAGV 248
Query 235 GEAVGRAVRASMVVASIAILVMTLAIYGQSPNFHLA 270
G AVG AVR S++V L+++L++YG + NF+L+
Sbjct 249 GVAVGNAVRTSLIVVVAVTLLVSLSVYGSNGNFNLS 284
>gi|108801581|ref|YP_641778.1| hypothetical protein Mmcs_4618 [Mycobacterium sp. MCS]
gi|119870735|ref|YP_940687.1| hypothetical protein Mkms_4706 [Mycobacterium sp. KMS]
gi|108772000|gb|ABG10722.1| protein of unknown function DUF140 [Mycobacterium sp. MCS]
gi|119696824|gb|ABL93897.1| protein of unknown function DUF140 [Mycobacterium sp. KMS]
Length=280
Score = 275 bits (704), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 134/259 (52%), Positives = 189/259 (73%), Gaps = 0/259 (0%)
Query 12 NRMGSQMRFFVGTLAGIPDALMHYRGELLRVIAQMGLGTGVLAVIGGTVAIVGFLAMTTG 71
+ MG Q F+ T+ IP+A+ YR E +R+IA+M +G G L +IGGTV + FL + +G
Sbjct 21 DTMGEQALFYGETIRYIPNAVTRYRKETIRLIAEMTMGAGALVMIGGTVGVAAFLTLASG 80
Query 72 AIVAVQGYNQFASVGVEALTGFASAFFNTREIQPGTVMVALAATVGAGTTAALGAMRINE 131
++AVQGY+ ++G+EALTGF SAF N R + P +ALAAT+GAGTTA LGAMR+ E
Sbjct 81 GVIAVQGYSSLGNIGIEALTGFLSAFLNVRIVAPVIAGIALAATIGAGTTAQLGAMRVAE 140
Query 132 EIDALEVIGIRSISYLASTRVLAGVVVAVPLFCVGLMTAYLAARVGTTAIYGQGSGVYDH 191
EIDA+E + + S+SYL STR++AG++ VPL+ + ++ A+ AAR T I GQ +G+YDH
Sbjct 141 EIDAVETMAVHSVSYLVSTRLMAGLIAIVPLYSLSVLAAFFAARFTTVYINGQSAGLYDH 200
Query 192 YFNTFLRPTDVLWSSVEVVVVALMIMLVCTYYGYAAHGGPAGVGEAVGRAVRASMVVASI 251
YFNTFL P+D+LWS ++ +V+++ +MLV TYYGY A GGP GVG AVG+AVR S++V
Sbjct 201 YFNTFLVPSDLLWSFLQAIVMSIAVMLVHTYYGYNASGGPVGVGIAVGQAVRTSLIVVVT 260
Query 252 AILVMTLAIYGQSPNFHLA 270
L ++LA+YG S NF+L+
Sbjct 261 ITLFISLAVYGASGNFNLS 279
>gi|126437565|ref|YP_001073256.1| hypothetical protein Mjls_5001 [Mycobacterium sp. JLS]
gi|126237365|gb|ABO00766.1| protein of unknown function DUF140 [Mycobacterium sp. JLS]
Length=280
Score = 275 bits (702), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 134/259 (52%), Positives = 189/259 (73%), Gaps = 0/259 (0%)
Query 12 NRMGSQMRFFVGTLAGIPDALMHYRGELLRVIAQMGLGTGVLAVIGGTVAIVGFLAMTTG 71
+ +G Q F+ T+ IP+AL YR E +R+IA+M +G G L +IGGTV + FL + +G
Sbjct 21 DTVGEQALFYGETIRYIPNALTRYRKETIRLIAEMTMGAGALVMIGGTVGVAAFLTLASG 80
Query 72 AIVAVQGYNQFASVGVEALTGFASAFFNTREIQPGTVMVALAATVGAGTTAALGAMRINE 131
++AVQGY+ ++G+EALTGF SAF N R + P +ALAAT+GAGTTA LGAMR+ E
Sbjct 81 GVIAVQGYSSLGNIGIEALTGFLSAFLNVRIVAPVIAGIALAATIGAGTTAQLGAMRVAE 140
Query 132 EIDALEVIGIRSISYLASTRVLAGVVVAVPLFCVGLMTAYLAARVGTTAIYGQGSGVYDH 191
EIDA+E + + S+SYL STR++AG++ VPL+ + ++ A+ AAR T I GQ +G+YDH
Sbjct 141 EIDAVETMAVHSVSYLVSTRLMAGLIAIVPLYSLSVLAAFFAARFTTVFINGQSAGLYDH 200
Query 192 YFNTFLRPTDVLWSSVEVVVVALMIMLVCTYYGYAAHGGPAGVGEAVGRAVRASMVVASI 251
YFNTFL P+D+LWS ++ +V+++ +MLV TYYGY A GGP GVG AVG+AVR S++V
Sbjct 201 YFNTFLVPSDLLWSFLQAIVMSIAVMLVHTYYGYNASGGPVGVGIAVGQAVRTSLIVVVT 260
Query 252 AILVMTLAIYGQSPNFHLA 270
L ++LA+YG S NF+L+
Sbjct 261 ITLFISLAVYGASGNFNLS 279
>gi|226361937|ref|YP_002779715.1| YrbE family protein [Rhodococcus opacus B4]
gi|226240422|dbj|BAH50770.1| putative YrbE family protein [Rhodococcus opacus B4]
Length=286
Score = 273 bits (699), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 142/257 (56%), Positives = 197/257 (77%), Gaps = 0/257 (0%)
Query 14 MGSQMRFFVGTLAGIPDALMHYRGELLRVIAQMGLGTGVLAVIGGTVAIVGFLAMTTGAI 73
+G Q FF T+ P A+ Y+ E +R+IA++G+G+G +A+IGGTV IVGF+ ++ G +
Sbjct 29 IGHQADFFGKTIRLAPHAISSYKKETVRLIAEIGMGSGAMAIIGGTVVIVGFMTLSGGTL 88
Query 74 VAVQGYNQFASVGVEALTGFASAFFNTREIQPGTVMVALAATVGAGTTAALGAMRINEEI 133
+A+QG++ ++GVEALTGF +AF N R + P +ALAAT+GAG TA LGAMRI+EEI
Sbjct 89 LAIQGFSSLGNIGVEALTGFFAAFINVRIVAPVISGIALAATIGAGATAQLGAMRISEEI 148
Query 134 DALEVIGIRSISYLASTRVLAGVVVAVPLFCVGLMTAYLAARVGTTAIYGQGSGVYDHYF 193
DALEV+GIRS+SYL STR++AG++ VPL+ + ++ +++A++ TT +YGQ SGVYDHYF
Sbjct 149 DALEVMGIRSMSYLVSTRLIAGMISIVPLYSMAVIMSFVASQFTTTYVYGQSSGVYDHYF 208
Query 194 NTFLRPTDVLWSSVEVVVVALMIMLVCTYYGYAAHGGPAGVGEAVGRAVRASMVVASIAI 253
TFLRPTD+ WS ++ VV+AL++ML+ YYGY A GGPAGVGEAVGRAVR S++
Sbjct 209 TTFLRPTDLFWSFLQAVVMALVVMLIHCYYGYHARGGPAGVGEAVGRAVRTSLIAVVSVT 268
Query 254 LVMTLAIYGQSPNFHLA 270
L+ +LAIYG S NF+LA
Sbjct 269 LIASLAIYGASGNFNLA 285
>gi|119867718|ref|YP_937670.1| hypothetical protein Mkms_1677 [Mycobacterium sp. KMS]
gi|120401521|ref|YP_951350.1| hypothetical protein Mvan_0499 [Mycobacterium vanbaalenii PYR-1]
gi|126434219|ref|YP_001069910.1| hypothetical protein Mjls_1626 [Mycobacterium sp. JLS]
8 more sequence titles
Length=285
Score = 271 bits (693), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 150/262 (58%), Positives = 191/262 (73%), Gaps = 0/262 (0%)
Query 9 SEWNRMGSQMRFFVGTLAGIPDALMHYRGELLRVIAQMGLGTGVLAVIGGTVAIVGFLAM 68
+ W +G Q RF+ +++ A YR E+LR IA +GLG G LAV+GGTVA+V FL +
Sbjct 23 ANWRDLGDQARFYGQSISSTVQAATTYRAEVLRQIAAIGLGAGSLAVVGGTVAVVAFLNL 82
Query 69 TTGAIVAVQGYNQFASVGVEALTGFASAFFNTREIQPGTVMVALAATVGAGTTAALGAMR 128
+T A +A Q YNQ + VGVEAL GF SA+ N R P + A AAT+GAGTTA LGAM+
Sbjct 83 STSAALASQAYNQMSQVGVEALAGFTSAYVNVRLATPASSAFAFAATIGAGTTAQLGAMK 142
Query 129 INEEIDALEVIGIRSISYLASTRVLAGVVVAVPLFCVGLMTAYLAARVGTTAIYGQGSGV 188
INEEIDAL V+GIR I+YLASTR+LAGV+V VPL+CV L+ ++ + RV TTA YGQGSGV
Sbjct 143 INEEIDALAVMGIRPIAYLASTRLLAGVIVVVPLYCVALLMSFFSVRVITTAFYGQGSGV 202
Query 189 YDHYFNTFLRPTDVLWSSVEVVVVALMIMLVCTYYGYAAHGGPAGVGEAVGRAVRASMVV 248
+DHYF+TFL P V +S V AL+IML+ TYYG A GGPAGVGEAVGRA R S++
Sbjct 203 FDHYFDTFLNPQAVFFSFAVTVAAALVIMLIHTYYGLNATGGPAGVGEAVGRATRTSLIA 262
Query 249 ASIAILVMTLAIYGQSPNFHLA 270
+ + IL++TLA+YGQ+ F+ A
Sbjct 263 SQMVILLVTLALYGQTGTFNYA 284
>gi|120403834|ref|YP_953663.1| hypothetical protein Mvan_2850 [Mycobacterium vanbaalenii PYR-1]
gi|119956652|gb|ABM13657.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii
PYR-1]
Length=282
Score = 271 bits (693), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 129/263 (50%), Positives = 188/263 (72%), Gaps = 0/263 (0%)
Query 8 VSEWNRMGSQMRFFVGTLAGIPDALMHYRGELLRVIAQMGLGTGVLAVIGGTVAIVGFLA 67
V R+G F+ LAG+P A MHYR E++R++A++ +G G LA+IGGT+ IVGFL
Sbjct 19 VGALGRIGDHTSFYGRALAGVPHAAMHYRKEIIRLVAEISMGAGTLAMIGGTIVIVGFLT 78
Query 68 MTTGAIVAVQGYNQFASVGVEALTGFASAFFNTREIQPGTVMVALAATVGAGTTAALGAM 127
+ G +AVQGY+ +G+EALTGF +AF N R P + LAAT GAG TA LGAM
Sbjct 79 LAAGGTLAVQGYSSLGDIGIEALTGFLAAFINVRISAPVVAGIGLAATFGAGVTAQLGAM 138
Query 128 RINEEIDALEVIGIRSISYLASTRVLAGVVVAVPLFCVGLMTAYLAARVGTTAIYGQGSG 187
RINEEIDALE +GIR + YL STR++AG++ PL+ + +M ++ A+++ T ++GQ +G
Sbjct 139 RINEEIDALETMGIRPVEYLVSTRIVAGMIAITPLYSIAVMLSFAASKLTTVVLFGQSAG 198
Query 188 VYDHYFNTFLRPTDVLWSSVEVVVVALMIMLVCTYYGYAAHGGPAGVGEAVGRAVRASMV 247
+Y+HYF TFL P D+LWS ++ +++A+ ++LV TY+GY A GGP+GVG AVG AVR S++
Sbjct 199 LYNHYFTTFLNPRDLLWSFLQAILMAMAVLLVHTYFGYFATGGPSGVGVAVGNAVRTSLI 258
Query 248 VASIAILVMTLAIYGQSPNFHLA 270
V L+++L++YG + NF+L+
Sbjct 259 VVISVTLLVSLSVYGANGNFNLS 281
>gi|226306857|ref|YP_002766817.1| YrbE family protein [Rhodococcus erythropolis PR4]
gi|229492717|ref|ZP_04386518.1| ABC-transporter integral membrane protein [Rhodococcus erythropolis
SK121]
gi|226185974|dbj|BAH34078.1| putative YrbE family protein [Rhodococcus erythropolis PR4]
gi|229320376|gb|EEN86196.1| ABC-transporter integral membrane protein [Rhodococcus erythropolis
SK121]
Length=290
Score = 270 bits (691), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 134/259 (52%), Positives = 189/259 (73%), Gaps = 0/259 (0%)
Query 12 NRMGSQMRFFVGTLAGIPDALMHYRGELLRVIAQMGLGTGVLAVIGGTVAIVGFLAMTTG 71
+ +G Q FF +A IP A+ + E+LR++A++ +GTG LAVIGGTVA+VGFL + +G
Sbjct 31 DDVGRQAVFFARAIAHIPWAIRKHPKEVLRLVAEISMGTGALAVIGGTVAVVGFLTLASG 90
Query 72 AIVAVQGYNQFASVGVEALTGFASAFFNTREIQPGTVMVALAATVGAGTTAALGAMRINE 131
+A+QG++ ++GVEALTGF SAF N R P + L+AT+GAG+TA +GAMRI+E
Sbjct 91 GTIAIQGFSSLGNIGVEALTGFFSAFINVRIAAPVIAGIGLSATIGAGSTAQIGAMRISE 150
Query 132 EIDALEVIGIRSISYLASTRVLAGVVVAVPLFCVGLMTAYLAARVGTTAIYGQGSGVYDH 191
EIDALE + I S+ Y+ STRV AG++ +PL+ + L+ ++LA R T ++GQ SG+YDH
Sbjct 151 EIDALESMAISSVPYVVSTRVTAGMIAILPLYSLALVGSFLAGRFTTVVLFGQSSGLYDH 210
Query 192 YFNTFLRPTDVLWSSVEVVVVALMIMLVCTYYGYAAHGGPAGVGEAVGRAVRASMVVASI 251
YF TFL P DV WS V+V+V+AL++ML+ TYYGY A GGP+GVG AVGR VR S++
Sbjct 211 YFTTFLDPVDVAWSFVQVLVMALLVMLIHTYYGYNASGGPSGVGTAVGRGVRLSLICVVA 270
Query 252 AILVMTLAIYGQSPNFHLA 270
L+++LA+YG S NF+L+
Sbjct 271 VTLLVSLALYGGSGNFNLS 289
>gi|108800638|ref|YP_640835.1| hypothetical protein Mmcs_3672 [Mycobacterium sp. MCS]
gi|119869777|ref|YP_939729.1| hypothetical protein Mkms_3745 [Mycobacterium sp. KMS]
gi|108771057|gb|ABG09779.1| protein of unknown function DUF140 [Mycobacterium sp. MCS]
gi|119695866|gb|ABL92939.1| protein of unknown function DUF140 [Mycobacterium sp. KMS]
Length=285
Score = 269 bits (687), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 126/263 (48%), Positives = 189/263 (72%), Gaps = 0/263 (0%)
Query 8 VSEWNRMGSQMRFFVGTLAGIPDALMHYRGELLRVIAQMGLGTGVLAVIGGTVAIVGFLA 67
V R+G M F++ + G+P A +H+R E++R+IA++ +G G LA+IGGT+ IVGFL
Sbjct 22 VDVLGRLGDHMLFYIRAIGGVPHATLHFRKEIIRLIAEISMGAGTLAMIGGTLVIVGFLT 81
Query 68 MTTGAIVAVQGYNQFASVGVEALTGFASAFFNTREIQPGTVMVALAATVGAGTTAALGAM 127
+ G +AVQG++ +G+EALTGF +AF N R P + LAAT GAG TA LGAM
Sbjct 82 LAAGGTLAVQGFSSLGDIGIEALTGFLAAFINVRIAAPTVAGIGLAATFGAGVTAQLGAM 141
Query 128 RINEEIDALEVIGIRSISYLASTRVLAGVVVAVPLFCVGLMTAYLAARVGTTAIYGQGSG 187
RINEEIDALE + IR + YL STR+ AG++ PL+ + ++ +++A++ T ++GQ +G
Sbjct 142 RINEEIDALESMAIRPVEYLVSTRIAAGMIAITPLYAIAVILSFVASQFTTVMLFGQSAG 201
Query 188 VYDHYFNTFLRPTDVLWSSVEVVVVALMIMLVCTYYGYAAHGGPAGVGEAVGRAVRASMV 247
+YDHYF+TFL P D+LWS ++ V++A+ I+LV TY+GY A GGP+GVG AVG AVR S++
Sbjct 202 LYDHYFDTFLNPIDLLWSFLQAVLMAITILLVHTYFGYFASGGPSGVGVAVGNAVRTSLI 261
Query 248 VASIAILVMTLAIYGQSPNFHLA 270
+ L+++L++YG++ NF+L+
Sbjct 262 LVVSVTLLVSLSVYGRNGNFNLS 284
>gi|118473565|ref|YP_887174.1| hypothetical protein MSMEG_2854 [Mycobacterium smegmatis str.
MC2 155]
gi|118174852|gb|ABK75748.1| conserved hypothetical protein [Mycobacterium smegmatis str.
MC2 155]
Length=281
Score = 269 bits (687), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 132/258 (52%), Positives = 187/258 (73%), Gaps = 0/258 (0%)
Query 13 RMGSQMRFFVGTLAGIPDALMHYRGELLRVIAQMGLGTGVLAVIGGTVAIVGFLAMTTGA 72
R+G F+ LAG P A MHYR E++R+IA++ +G G LA+IGGTV IVGFL + G
Sbjct 23 RLGDHTSFYGRALAGTPHAAMHYRREVIRLIAEISMGAGTLAMIGGTVVIVGFLTLAAGG 82
Query 73 IVAVQGYNQFASVGVEALTGFASAFFNTREIQPGTVMVALAATVGAGTTAALGAMRINEE 132
+AVQGY+ ++G+EALTGF +AF N R P + LAAT GAG TA LGAMRINEE
Sbjct 83 TLAVQGYSSLGNIGIEALTGFLAAFINVRISAPVVAGIGLAATFGAGVTAQLGAMRINEE 142
Query 133 IDALEVIGIRSISYLASTRVLAGVVVAVPLFCVGLMTAYLAARVGTTAIYGQGSGVYDHY 192
IDALE +GIR + YL STR++AG+V PL+ V ++ ++ A+ + T ++GQ +G+Y+HY
Sbjct 143 IDALESMGIRPVEYLVSTRIVAGMVAITPLYAVAVILSFAASNLTTVVMFGQSAGLYNHY 202
Query 193 FNTFLRPTDVLWSSVEVVVVALMIMLVCTYYGYAAHGGPAGVGEAVGRAVRASMVVASIA 252
F+TFL P D+LWS ++ +++A+ I+LV TY+G+ A GGP+GVG AVG AVR S++V
Sbjct 203 FSTFLNPVDLLWSFLQAILMAIAILLVHTYFGFFAAGGPSGVGVAVGNAVRTSLIVVIAV 262
Query 253 ILVMTLAIYGQSPNFHLA 270
L+++LA+YG + NF+L+
Sbjct 263 TLLVSLAVYGSNGNFNLS 280
>gi|126436262|ref|YP_001071953.1| hypothetical protein Mjls_3685 [Mycobacterium sp. JLS]
gi|126236062|gb|ABN99462.1| protein of unknown function DUF140 [Mycobacterium sp. JLS]
Length=285
Score = 268 bits (686), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 127/263 (49%), Positives = 188/263 (72%), Gaps = 0/263 (0%)
Query 8 VSEWNRMGSQMRFFVGTLAGIPDALMHYRGELLRVIAQMGLGTGVLAVIGGTVAIVGFLA 67
V R+G M F++ + G+P A +H+R E++R+IA++ +G G LA+IGGT+ IVGFL
Sbjct 22 VDVLGRLGDHMLFYIRAIGGVPHATVHFRKEIIRLIAEISMGAGTLAMIGGTLVIVGFLT 81
Query 68 MTTGAIVAVQGYNQFASVGVEALTGFASAFFNTREIQPGTVMVALAATVGAGTTAALGAM 127
+ G +AVQG++ +G+EALTGF +AF N R P + LAAT GAG TA LGAM
Sbjct 82 LAAGGTLAVQGFSSLGDIGIEALTGFLAAFINVRIAAPTVAGIGLAATFGAGVTAQLGAM 141
Query 128 RINEEIDALEVIGIRSISYLASTRVLAGVVVAVPLFCVGLMTAYLAARVGTTAIYGQGSG 187
RINEEIDALE + IR + YL STR+ AG++ PL+ + ++ ++LA++ T ++GQ G
Sbjct 142 RINEEIDALESMAIRPVEYLVSTRIAAGMIAITPLYAIAVILSFLASQFVTVMLFGQSGG 201
Query 188 VYDHYFNTFLRPTDVLWSSVEVVVVALMIMLVCTYYGYAAHGGPAGVGEAVGRAVRASMV 247
+YDHYF+TFL P D+LWS ++ V++A+ I+LV TY+GY A GGP+GVG AVG AVR S++
Sbjct 202 LYDHYFDTFLNPIDLLWSFLQAVLMAITILLVHTYFGYFASGGPSGVGVAVGNAVRTSLI 261
Query 248 VASIAILVMTLAIYGQSPNFHLA 270
+ L+++L++YG++ NF+L+
Sbjct 262 LVVSVTLLVSLSVYGRNGNFNLS 284
>gi|284034023|ref|YP_003383954.1| hypothetical protein Kfla_6152 [Kribbella flavida DSM 17836]
gi|283813316|gb|ADB35155.1| protein of unknown function DUF140 [Kribbella flavida DSM 17836]
Length=275
Score = 268 bits (685), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 136/266 (52%), Positives = 189/266 (72%), Gaps = 0/266 (0%)
Query 5 KALVSEWNRMGSQMRFFVGTLAGIPDALMHYRGELLRVIAQMGLGTGVLAVIGGTVAIVG 64
K ++ +R+G Q+ F++ LA ++ YR E+LR++A++ LGTG LAVIGGTV ++
Sbjct 9 KKPLNSLDRLGEQLAFYLKALAWSGRSVTRYRKEILRLLAEVTLGTGALAVIGGTVGVIT 68
Query 65 FLAMTTGAIVAVQGYNQFASVGVEALTGFASAFFNTREIQPGTVMVALAATVGAGTTAAL 124
FLA TG V +QGY+ +G A GF SA+ NTREI P +ALAATVG G TA L
Sbjct 69 FLAFFTGTEVGLQGYSALNQIGTSAFAGFVSAYINTREIGPLIAGIALAATVGCGFTAQL 128
Query 125 GAMRINEEIDALEVIGIRSISYLASTRVLAGVVVAVPLFCVGLMTAYLAARVGTTAIYGQ 184
GAMRI+EEIDALEV+ I S+ +L +TR++AG++ VPL+ VGL+++Y A R+ T YGQ
Sbjct 129 GAMRISEEIDALEVMAIPSLPFLVTTRIIAGLIAVVPLYVVGLLSSYFATRLTVTTFYGQ 188
Query 185 GSGVYDHYFNTFLRPTDVLWSSVEVVVVALMIMLVCTYYGYAAHGGPAGVGEAVGRAVRA 244
+G YDHYF+ FL P DVLWS +V+V A++++LV Y+GY A GGPAGVG AVGRAVR
Sbjct 189 STGTYDHYFHLFLPPGDVLWSFGKVLVFAVLVILVHCYHGYHASGGPAGVGVAVGRAVRT 248
Query 245 SMVVASIAILVMTLAIYGQSPNFHLA 270
S+VV ++ L++++AI+G + LA
Sbjct 249 SIVVINVVDLLLSMAIWGTTTTVRLA 274
>gi|145225117|ref|YP_001135795.1| hypothetical protein Mflv_4539 [Mycobacterium gilvum PYR-GCK]
gi|315445484|ref|YP_004078363.1| ABC transporter involved in resistance to organic solvents, permease
[Mycobacterium sp. Spyr1]
gi|145217603|gb|ABP47007.1| protein of unknown function DUF140 [Mycobacterium gilvum PYR-GCK]
gi|315263787|gb|ADU00529.1| ABC-type transport system involved in resistance to organic solvents,
permease component [Mycobacterium sp. Spyr1]
Length=282
Score = 267 bits (683), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 128/257 (50%), Positives = 188/257 (74%), Gaps = 0/257 (0%)
Query 14 MGSQMRFFVGTLAGIPDALMHYRGELLRVIAQMGLGTGVLAVIGGTVAIVGFLAMTTGAI 73
+G F+ LAG+P A++HYR E++R++A++ +G G LA+IGGTV IVGFL + G
Sbjct 25 IGEHTAFYGRALAGVPHAVVHYRREIIRLVAEISMGAGTLAMIGGTVVIVGFLTLAAGGT 84
Query 74 VAVQGYNQFASVGVEALTGFASAFFNTREIQPGTVMVALAATVGAGTTAALGAMRINEEI 133
+AVQGY+ +G+EALTGF +AF N R P + LAAT GAG TA LGAMRINEEI
Sbjct 85 LAVQGYSSLGDIGIEALTGFLAAFINVRISAPVVAGIGLAATFGAGVTAQLGAMRINEEI 144
Query 134 DALEVIGIRSISYLASTRVLAGVVVAVPLFCVGLMTAYLAARVGTTAIYGQGSGVYDHYF 193
DALE +GIR + YL STR++AG++ PL+ + ++ ++LA+++ T ++GQ +G+Y+HYF
Sbjct 145 DALETMGIRPVEYLVSTRIVAGMIAIAPLYSIAVILSFLASKLTTVVLFGQSAGLYNHYF 204
Query 194 NTFLRPTDVLWSSVEVVVVALMIMLVCTYYGYAAHGGPAGVGEAVGRAVRASMVVASIAI 253
TFL P D+LWS ++ +++A+ ++LV TY+GY A GGP+GVG AVG AVR S++V
Sbjct 205 TTFLNPRDLLWSFLQAILMAMAVLLVHTYFGYFAGGGPSGVGVAVGNAVRTSLIVVISVT 264
Query 254 LVMTLAIYGQSPNFHLA 270
L+++LA+YG + NF+L+
Sbjct 265 LLVSLAVYGANGNFNLS 281
>gi|118469369|ref|YP_889051.1| ABC transporter transmembrane protein [Mycobacterium smegmatis
str. MC2 155]
gi|118170656|gb|ABK71552.1| ABC-transporter integral membrane protein [Mycobacterium smegmatis
str. MC2 155]
Length=282
Score = 266 bits (680), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 131/263 (50%), Positives = 191/263 (73%), Gaps = 0/263 (0%)
Query 8 VSEWNRMGSQMRFFVGTLAGIPDALMHYRGELLRVIAQMGLGTGVLAVIGGTVAIVGFLA 67
V+ +R+G F++ +AG P A +HYR EL+R+IA++ +G G LA+IGGTV IVGFL
Sbjct 19 VATLSRVGDHTLFYLRAIAGTPHAALHYRKELVRLIAEISMGAGTLAMIGGTVVIVGFLT 78
Query 68 MTTGAIVAVQGYNQFASVGVEALTGFASAFFNTREIQPGTVMVALAATVGAGTTAALGAM 127
+ TG ++A+QGY+ ++G+EALTGF SAF N R P + LAAT GAG TA LGAM
Sbjct 79 LATGGVLAIQGYSSLGNIGIEALTGFLSAFINVRIAAPVVAGIGLAATFGAGVTAQLGAM 138
Query 128 RINEEIDALEVIGIRSISYLASTRVLAGVVVAVPLFCVGLMTAYLAARVGTTAIYGQGSG 187
RINEEIDALE + IR + YL STR++AG++ PL+ + ++ ++LA++ T + GQ G
Sbjct 139 RINEEIDALESMAIRPVEYLVSTRIVAGMIAITPLYAIAVILSFLASQFTTVVLLGQSGG 198
Query 188 VYDHYFNTFLRPTDVLWSSVEVVVVALMIMLVCTYYGYAAHGGPAGVGEAVGRAVRASMV 247
+Y+HYF+TFL P D+LWS ++ +++A+ I+L+ TY+GY A GGP+GVG AVG AVR S++
Sbjct 199 LYNHYFDTFLNPIDLLWSFLQAILMAITILLIHTYFGYFASGGPSGVGVAVGNAVRTSLI 258
Query 248 VASIAILVMTLAIYGQSPNFHLA 270
V L+++LA+YG + NF+L+
Sbjct 259 VVVSVTLLVSLAVYGSNGNFNLS 281
>gi|342860431|ref|ZP_08717082.1| TrnB2 protein [Mycobacterium colombiense CECT 3035]
gi|342132086|gb|EGT85327.1| TrnB2 protein [Mycobacterium colombiense CECT 3035]
Length=281
Score = 265 bits (676), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 133/263 (51%), Positives = 187/263 (72%), Gaps = 0/263 (0%)
Query 8 VSEWNRMGSQMRFFVGTLAGIPDALMHYRGELLRVIAQMGLGTGVLAVIGGTVAIVGFLA 67
V+ + R+G F+ LAG+P A HYR E++R+IA++ +G G LA+IGGTV IVGFL
Sbjct 18 VAFFGRIGDHSLFYGKALAGVPFAATHYRREVIRLIAEISMGAGTLAMIGGTVVIVGFLT 77
Query 68 MTTGAIVAVQGYNQFASVGVEALTGFASAFFNTREIQPGTVMVALAATVGAGTTAALGAM 127
+ G +A+QGY ++G+EALTGF SAF N R P + LAAT GAG TA LGAM
Sbjct 78 LAAGGTLAIQGYTSLGNIGIEALTGFLSAFINVRIAAPVVAGIGLAATFGAGVTAQLGAM 137
Query 128 RINEEIDALEVIGIRSISYLASTRVLAGVVVAVPLFCVGLMTAYLAARVGTTAIYGQGSG 187
RINEE+DALE + IR ++YL STR+LAG++ PL+ + ++ +++A++ TT + GQ G
Sbjct 138 RINEEVDALESMAIRPVAYLVSTRILAGMMAITPLYSIAVILSFVASQFTTTFLLGQSQG 197
Query 188 VYDHYFNTFLRPTDVLWSSVEVVVVALMIMLVCTYYGYAAHGGPAGVGEAVGRAVRASMV 247
+Y HYFNTFL P D+LWS ++ +++AL I+L+ TYYGY A GGPAGVG A G AVR S++
Sbjct 198 LYQHYFNTFLNPIDLLWSFLQAILMALTILLIHTYYGYFASGGPAGVGNATGNAVRTSLI 257
Query 248 VASIAILVMTLAIYGQSPNFHLA 270
V L+++L+IYG + NF+L+
Sbjct 258 VVVSVTLLVSLSIYGTNGNFNLS 280
>gi|120402601|ref|YP_952430.1| hypothetical protein Mvan_1595 [Mycobacterium vanbaalenii PYR-1]
gi|119955419|gb|ABM12424.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii
PYR-1]
Length=280
Score = 264 bits (674), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 132/256 (52%), Positives = 183/256 (72%), Gaps = 0/256 (0%)
Query 15 GSQMRFFVGTLAGIPDALMHYRGELLRVIAQMGLGTGVLAVIGGTVAIVGFLAMTTGAIV 74
G Q F+ +LA +P A+ YR E R+IA+M G G L VIGGT+ + FL + +G ++
Sbjct 24 GEQALFYGQSLASLPLAVRLYRRETARLIAEMAFGAGGLLVIGGTLGVTVFLTLASGGVI 83
Query 75 AVQGYNQFASVGVEALTGFASAFFNTREIQPGTVMVALAATVGAGTTAALGAMRINEEID 134
AVQGY +G+EALTGF SAF N R + P +ALAAT+GAG+TA LGAMRI EEID
Sbjct 84 AVQGYASLGDIGIEALTGFLSAFLNVRIVAPVIAGIALAATIGAGSTAQLGAMRIAEEID 143
Query 135 ALEVIGIRSISYLASTRVLAGVVVAVPLFCVGLMTAYLAARVGTTAIYGQGSGVYDHYFN 194
ALEV+ +RS++YL +TR++AGV+V VPL+ + ++T++ +AR T + GQ G+YDHYFN
Sbjct 144 ALEVMAVRSMAYLVATRMIAGVIVIVPLYSLAILTSFFSARFTTVYLSGQSRGLYDHYFN 203
Query 195 TFLRPTDVLWSSVEVVVVALMIMLVCTYYGYAAHGGPAGVGEAVGRAVRASMVVASIAIL 254
TFL PTD+LWS ++ + +++ +MLV TYYGY A GGP GVG A G AVR S++V + L
Sbjct 204 TFLIPTDLLWSFLQAIAMSIAVMLVHTYYGYNAKGGPVGVGVATGDAVRTSLIVVVVITL 263
Query 255 VMTLAIYGQSPNFHLA 270
+++LA+YG S F L+
Sbjct 264 LISLAVYGSSGGFTLS 279
>gi|269128542|ref|YP_003301912.1| hypothetical protein Tcur_4347 [Thermomonospora curvata DSM 43183]
gi|268313500|gb|ACY99874.1| protein of unknown function DUF140 [Thermomonospora curvata DSM
43183]
Length=282
Score = 263 bits (672), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 135/270 (50%), Positives = 188/270 (70%), Gaps = 3/270 (1%)
Query 4 AKALVSEWNRM---GSQMRFFVGTLAGIPDALMHYRGELLRVIAQMGLGTGVLAVIGGTV 60
A+ + NR+ G Q+ F+ A L YR E+ R++A++ LGTG LAVIGG+V
Sbjct 12 ARVIGKPLNRVEDFGHQLSFYARAFAWTLRVLRRYRTEVARLLAEVSLGTGGLAVIGGSV 71
Query 61 AIVGFLAMTTGAIVAVQGYNQFASVGVEALTGFASAFFNTREIQPGTVMVALAATVGAGT 120
AIVGF+ TG+ V +QGYN +G A TGF S++FNTRE+ P +AL+ATVG G
Sbjct 72 AIVGFMTFFTGSQVGLQGYNSLNQIGTAAYTGFVSSYFNTRELAPLVSALALSATVGCGF 131
Query 121 TAALGAMRINEEIDALEVIGIRSISYLASTRVLAGVVVAVPLFCVGLMTAYLAARVGTTA 180
TA LGAMRI++EIDALEV+ + ++ +L +TR+LAG++ +PL+ VGL+ +YLA R+ T
Sbjct 132 TAQLGAMRISDEIDALEVMAVPTVPFLVTTRLLAGMIAVIPLYVVGLLASYLATRLIVTV 191
Query 181 IYGQGSGVYDHYFNTFLRPTDVLWSSVEVVVVALMIMLVCTYYGYAAHGGPAGVGEAVGR 240
YGQ +G YDHYFN FL P D+LWS +V+V A+++ML+ YYG+ A GGPAGVG AVGR
Sbjct 192 FYGQSTGTYDHYFNLFLPPYDILWSFGKVIVFAILVMLIHCYYGFHASGGPAGVGVAVGR 251
Query 241 AVRASMVVASIAILVMTLAIYGQSPNFHLA 270
AVR S+VV ++A L + +AI+G + +A
Sbjct 252 AVRTSIVVINLADLFLGMAIWGATTTVRIA 281
>gi|333992271|ref|YP_004524885.1| hypothetical protein JDM601_3631 [Mycobacterium sp. JDM601]
gi|333488239|gb|AEF37631.1| membrane protein YrbE4B [Mycobacterium sp. JDM601]
Length=280
Score = 262 bits (670), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 128/259 (50%), Positives = 188/259 (73%), Gaps = 0/259 (0%)
Query 12 NRMGSQMRFFVGTLAGIPDALMHYRGELLRVIAQMGLGTGVLAVIGGTVAIVGFLAMTTG 71
+ G Q F+ ++ +P+AL YR E +R+IA++ +GTG LA+IGGTV + FL + +G
Sbjct 21 DDFGEQALFYADSIRYVPNALTKYRKETVRLIAEITMGTGALAIIGGTVGVATFLTLASG 80
Query 72 AIVAVQGYNQFASVGVEALTGFASAFFNTREIQPGTVMVALAATVGAGTTAALGAMRINE 131
++AVQG++ ++G+EALTGF SAF N R + P +ALAAT+GAGTTA LGAMR+ E
Sbjct 81 GVIAVQGFSSLGNIGIEALTGFLSAFLNVRIVAPVVAGIALAATIGAGTTAQLGAMRVAE 140
Query 132 EIDALEVIGIRSISYLASTRVLAGVVVAVPLFCVGLMTAYLAARVGTTAIYGQGSGVYDH 191
EIDA+E + + ++SYL STR++AG++ +PL+ + ++ A+ AAR T I Q G+YDH
Sbjct 141 EIDAVEAMAVHAVSYLVSTRLVAGLIAIIPLYSLSVLAAFFAARSTTVFINSQSPGLYDH 200
Query 192 YFNTFLRPTDVLWSSVEVVVVALMIMLVCTYYGYAAHGGPAGVGEAVGRAVRASMVVASI 251
YF+TFL PTD+LWS ++ +++++ +MLV T YGY A GGP GVG AVG+AVR S+VV +
Sbjct 201 YFDTFLIPTDLLWSFLQAIIMSIAVMLVHTNYGYNAAGGPVGVGIAVGQAVRTSLVVVVV 260
Query 252 AILVMTLAIYGQSPNFHLA 270
L ++LA+YG S NF+L+
Sbjct 261 ITLFVSLAVYGGSGNFNLS 279
>gi|296169578|ref|ZP_06851198.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295895844|gb|EFG75539.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Mycobacterium parascrofulaceum ATCC BAA-614]
Length=287
Score = 261 bits (668), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 133/263 (51%), Positives = 185/263 (71%), Gaps = 0/263 (0%)
Query 8 VSEWNRMGSQMRFFVGTLAGIPDALMHYRGELLRVIAQMGLGTGVLAVIGGTVAIVGFLA 67
V R+G F+ LAG+P A+ HYR E++R+IA++ +G G LA+IGGT+ IVGFL
Sbjct 24 VGTLGRIGDHTLFYGKALAGVPFAVRHYRREVIRLIAEISMGAGTLAMIGGTLVIVGFLT 83
Query 68 MTTGAIVAVQGYNQFASVGVEALTGFASAFFNTREIQPGTVMVALAATVGAGTTAALGAM 127
+ G +AVQGY+ ++G+EALTGF +AF N R P + LAAT GAG TA LGAM
Sbjct 84 LAAGGTLAVQGYSSLGNIGIEALTGFLAAFINVRIAAPIVAGIGLAATFGAGVTAQLGAM 143
Query 128 RINEEIDALEVIGIRSISYLASTRVLAGVVVAVPLFCVGLMTAYLAARVGTTAIYGQGSG 187
RINEEIDALE + IR ISYL STR+ AG++ PL+ + ++ ++LA++ T ++GQ G
Sbjct 144 RINEEIDALESMAIRPISYLVSTRIAAGMMAITPLYSIAVILSFLASQFTTVVLFGQSGG 203
Query 188 VYDHYFNTFLRPTDVLWSSVEVVVVALMIMLVCTYYGYAAHGGPAGVGEAVGRAVRASMV 247
+Y HYF TFL P D+LWS ++ V++A+ I+L+ TY+GY A GGPAGVG A G AVR S++
Sbjct 204 LYQHYFTTFLNPIDLLWSFLQAVLMAITILLIHTYFGYFASGGPAGVGVATGNAVRTSLI 263
Query 248 VASIAILVMTLAIYGQSPNFHLA 270
V L+++L+IYG + NFHL+
Sbjct 264 VVVSVTLLVSLSIYGSNGNFHLS 286
>gi|54022503|ref|YP_116745.1| putative YrbE family protein [Nocardia farcinica IFM 10152]
gi|54014011|dbj|BAD55381.1| putative YrbE family protein [Nocardia farcinica IFM 10152]
Length=283
Score = 261 bits (668), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 144/266 (55%), Positives = 191/266 (72%), Gaps = 0/266 (0%)
Query 5 KALVSEWNRMGSQMRFFVGTLAGIPDALMHYRGELLRVIAQMGLGTGVLAVIGGTVAIVG 64
+ + + +G F+ LA IP ALMHYR E +R+IA++ +GTG LAVIGGTV IVG
Sbjct 17 RRMSDSLDSVGKHAVFYAQALASIPRALMHYRTETIRLIAEISMGTGALAVIGGTVVIVG 76
Query 65 FLAMTTGAIVAVQGYNQFASVGVEALTGFASAFFNTREIQPGTVMVALAATVGAGTTAAL 124
FL + +G +AVQGY+ ++GVEALTGF SAF N R P + LAAT+GAG+TA L
Sbjct 77 FLTLFSGGTIAVQGYSSLGNIGVEALTGFFSAFLNVRIAAPVISGIGLAATIGAGSTAQL 136
Query 125 GAMRINEEIDALEVIGIRSISYLASTRVLAGVVVAVPLFCVGLMTAYLAARVGTTAIYGQ 184
GAMR++EEIDALE + IR + YL TRVLAG++ VPL+ + ++ ++ AAR T IYGQ
Sbjct 137 GAMRVSEEIDALETMAIRPVPYLIGTRVLAGMIAIVPLYALAVIASFFAARFATVVIYGQ 196
Query 185 GSGVYDHYFNTFLRPTDVLWSSVEVVVVALMIMLVCTYYGYAAHGGPAGVGEAVGRAVRA 244
+GVYDHYF+TFL P+D+LWS + +++AL +M++ TYYGY A GGP GVG AVG AVRA
Sbjct 197 SAGVYDHYFSTFLIPSDILWSFSQAILMALAVMMIHTYYGYFAAGGPVGVGVAVGNAVRA 256
Query 245 SMVVASIAILVMTLAIYGQSPNFHLA 270
S+V L+M+LAIYG S NF+L+
Sbjct 257 SLVAVVTVTLLMSLAIYGTSGNFNLS 282
>gi|118463834|ref|YP_879936.1| ABC transporter transmembrane protein [Mycobacterium avium 104]
gi|254773612|ref|ZP_05215128.1| ABC-transporter integral membrane protein [Mycobacterium avium
subsp. avium ATCC 25291]
gi|118165121|gb|ABK66018.1| ABC-transporter integral membrane protein [Mycobacterium avium
104]
gi|336458449|gb|EGO37423.1| ABC-type transport system involved in resistance to organic solvents,
permease component [Mycobacterium avium subsp. paratuberculosis
S397]
Length=280
Score = 261 bits (667), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 133/259 (52%), Positives = 189/259 (73%), Gaps = 0/259 (0%)
Query 12 NRMGSQMRFFVGTLAGIPDALMHYRGELLRVIAQMGLGTGVLAVIGGTVAIVGFLAMTTG 71
+ G Q F+ T+ +P+AL YR E +R+IA+M +G G L +IGGTV + FL + +G
Sbjct 21 DDFGEQALFYGQTMRYVPNALTRYRKETIRLIAEMTMGAGALVMIGGTVGVAAFLTLASG 80
Query 72 AIVAVQGYNQFASVGVEALTGFASAFFNTREIQPGTVMVALAATVGAGTTAALGAMRINE 131
++AVQGY+ ++G+EALTGF SAF N R + P +ALAAT+GAG TA LGAMR++E
Sbjct 81 GVIAVQGYSSLGNIGIEALTGFLSAFLNVRVVAPVIAGIALAATIGAGATAQLGAMRVSE 140
Query 132 EIDALEVIGIRSISYLASTRVLAGVVVAVPLFCVGLMTAYLAARVGTTAIYGQGSGVYDH 191
EIDA+E + + S+SYL STR++AG++ VPL+ + ++ A+ AAR T I GQ G+YDH
Sbjct 141 EIDAVECMAVHSVSYLVSTRLIAGLIAIVPLYSLSVLAAFFAARFTTVYINGQSKGLYDH 200
Query 192 YFNTFLRPTDVLWSSVEVVVVALMIMLVCTYYGYAAHGGPAGVGEAVGRAVRASMVVASI 251
YFNTFL P+D+LWS ++ +V+++ +MLV TYYGY AHGGP GVG AVG+AVR S++V +
Sbjct 201 YFNTFLIPSDLLWSFLQAIVMSIAVMLVHTYYGYNAHGGPVGVGIAVGQAVRTSLIVVVV 260
Query 252 AILVMTLAIYGQSPNFHLA 270
L ++LA+YG S NF+L+
Sbjct 261 ITLFISLAVYGASGNFNLS 279
>gi|41406661|ref|NP_959497.1| hypothetical protein MAP0563 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41395010|gb|AAS02880.1| hypothetical protein MAP_0563 [Mycobacterium avium subsp. paratuberculosis
K-10]
Length=280
Score = 261 bits (666), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 133/259 (52%), Positives = 189/259 (73%), Gaps = 0/259 (0%)
Query 12 NRMGSQMRFFVGTLAGIPDALMHYRGELLRVIAQMGLGTGVLAVIGGTVAIVGFLAMTTG 71
+ G Q F+ T+ +P+AL YR E +R+IA+M +G G L +IGGTV + FL + +G
Sbjct 21 DDFGEQALFYGQTMRYVPNALTRYRKETIRLIAEMTMGAGALVMIGGTVGVAAFLTLASG 80
Query 72 AIVAVQGYNQFASVGVEALTGFASAFFNTREIQPGTVMVALAATVGAGTTAALGAMRINE 131
++AVQGY+ ++G+EALTGF SAF N R + P +ALAAT+GAG TA LGAMR++E
Sbjct 81 GVIAVQGYSSLGNIGIEALTGFLSAFLNVRVVAPVIAGIALAATIGAGATAQLGAMRVSE 140
Query 132 EIDALEVIGIRSISYLASTRVLAGVVVAVPLFCVGLMTAYLAARVGTTAIYGQGSGVYDH 191
EIDA+E + + S+SYL STR++AG++ VPL+ + ++ A+ AAR T I GQ G+YDH
Sbjct 141 EIDAVECMAVHSVSYLVSTRLIAGLIAIVPLYSLSVLAAFFAARFTTVYINGQSKGLYDH 200
Query 192 YFNTFLRPTDVLWSSVEVVVVALMIMLVCTYYGYAAHGGPAGVGEAVGRAVRASMVVASI 251
YFNTFL P+D+LWS ++ +V+++ +MLV TYYGY AHGGP GVG AVG+AVR S++V +
Sbjct 201 YFNTFLIPSDLLWSFLQAIVMSIAVMLVHTYYGYNAHGGPVGVGIAVGQAVRTSLIVVVV 260
Query 252 AILVMTLAIYGQSPNFHLA 270
L ++LA+YG S NF+L+
Sbjct 261 ITLFISLAVYGVSGNFNLS 279
>gi|134103292|ref|YP_001108953.1| putative ABC transport system permease protein [Saccharopolyspora
erythraea NRRL 2338]
gi|133915915|emb|CAM06028.1| putative ABC transport system permease protein [Saccharopolyspora
erythraea NRRL 2338]
Length=269
Score = 261 bits (666), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 130/253 (52%), Positives = 182/253 (72%), Gaps = 0/253 (0%)
Query 12 NRMGSQMRFFVGTLAGIPDALMHYRGELLRVIAQMGLGTGVLAVIGGTVAIVGFLAMTTG 71
+ +G QM F++ TLA IP A+ Y E +R++A++ G+G LAVIGGTV ++ + + TG
Sbjct 10 DDLGDQMSFYLRTLAWIPKAVTRYVKETMRLLAEVSFGSGALAVIGGTVGVMVGMTLFTG 69
Query 72 AIVAVQGYNQFASVGVEALTGFASAFFNTREIQPGTVMVALAATVGAGTTAALGAMRINE 131
+V +QGY +G A GF SA+FNTREI P +AL+ATVG+G TA LGAMRI++
Sbjct 70 TVVGLQGYAALNQIGTSAFAGFVSAYFNTREIAPLVAGLALSATVGSGFTAQLGAMRISD 129
Query 132 EIDALEVIGIRSISYLASTRVLAGVVVAVPLFCVGLMTAYLAARVGTTAIYGQGSGVYDH 191
EIDALE +G+ S+ YL +TRV+AG V VPL+ +GL+T+YLAAR+ T +YGQ +G YDH
Sbjct 130 EIDALETMGVPSLPYLVTTRVVAGFVAVVPLYVLGLLTSYLAARLVTVHVYGQSAGTYDH 189
Query 192 YFNTFLRPTDVLWSSVEVVVVALMIMLVCTYYGYAAHGGPAGVGEAVGRAVRASMVVASI 251
YFN FL P DVLWS +V+V ++++++ YYGY A GGPAGVG AVGRAVR ++V ++
Sbjct 190 YFNLFLPPEDVLWSFGKVLVFSVVVIMTHCYYGYRASGGPAGVGVAVGRAVRTAIVTTAL 249
Query 252 AILVMTLAIYGQS 264
++LAI+G +
Sbjct 250 LDFFLSLAIWGTT 262
>gi|291004489|ref|ZP_06562462.1| putative ABC transport system permease protein [Saccharopolyspora
erythraea NRRL 2338]
Length=279
Score = 261 bits (666), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 130/253 (52%), Positives = 182/253 (72%), Gaps = 0/253 (0%)
Query 12 NRMGSQMRFFVGTLAGIPDALMHYRGELLRVIAQMGLGTGVLAVIGGTVAIVGFLAMTTG 71
+ +G QM F++ TLA IP A+ Y E +R++A++ G+G LAVIGGTV ++ + + TG
Sbjct 20 DDLGDQMSFYLRTLAWIPKAVTRYVKETMRLLAEVSFGSGALAVIGGTVGVMVGMTLFTG 79
Query 72 AIVAVQGYNQFASVGVEALTGFASAFFNTREIQPGTVMVALAATVGAGTTAALGAMRINE 131
+V +QGY +G A GF SA+FNTREI P +AL+ATVG+G TA LGAMRI++
Sbjct 80 TVVGLQGYAALNQIGTSAFAGFVSAYFNTREIAPLVAGLALSATVGSGFTAQLGAMRISD 139
Query 132 EIDALEVIGIRSISYLASTRVLAGVVVAVPLFCVGLMTAYLAARVGTTAIYGQGSGVYDH 191
EIDALE +G+ S+ YL +TRV+AG V VPL+ +GL+T+YLAAR+ T +YGQ +G YDH
Sbjct 140 EIDALETMGVPSLPYLVTTRVVAGFVAVVPLYVLGLLTSYLAARLVTVHVYGQSAGTYDH 199
Query 192 YFNTFLRPTDVLWSSVEVVVVALMIMLVCTYYGYAAHGGPAGVGEAVGRAVRASMVVASI 251
YFN FL P DVLWS +V+V ++++++ YYGY A GGPAGVG AVGRAVR ++V ++
Sbjct 200 YFNLFLPPEDVLWSFGKVLVFSVVVIMTHCYYGYRASGGPAGVGVAVGRAVRTAIVTTAL 259
Query 252 AILVMTLAIYGQS 264
++LAI+G +
Sbjct 260 LDFFLSLAIWGTT 272
>gi|342862239|ref|ZP_08718881.1| ABC transporter transmembrane protein [Mycobacterium colombiense
CECT 3035]
gi|342130317|gb|EGT83637.1| ABC transporter transmembrane protein [Mycobacterium colombiense
CECT 3035]
Length=280
Score = 260 bits (665), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 132/259 (51%), Positives = 189/259 (73%), Gaps = 0/259 (0%)
Query 12 NRMGSQMRFFVGTLAGIPDALMHYRGELLRVIAQMGLGTGVLAVIGGTVAIVGFLAMTTG 71
+ G Q F+ T+ +P+AL YR E +R+IA+M +G G L +IGGTV + FL + +G
Sbjct 21 DDFGEQALFYGQTMRYVPNALTRYRKETVRLIAEMTMGAGALVMIGGTVGVAAFLTLASG 80
Query 72 AIVAVQGYNQFASVGVEALTGFASAFFNTREIQPGTVMVALAATVGAGTTAALGAMRINE 131
++AVQGY+ ++G+EALTGF SAF N R + P +ALAAT+GAG TA LGAMR++E
Sbjct 81 GVIAVQGYSSLGNIGIEALTGFLSAFLNVRVVAPVIAGIALAATIGAGATAQLGAMRVSE 140
Query 132 EIDALEVIGIRSISYLASTRVLAGVVVAVPLFCVGLMTAYLAARVGTTAIYGQGSGVYDH 191
EIDA+E + + S+SYL STR++AG++ +PL+ + ++ A+ AAR T I GQ G+YDH
Sbjct 141 EIDAVECMAVHSVSYLVSTRLIAGLIAIIPLYSLSVLAAFFAARFTTVYINGQSKGLYDH 200
Query 192 YFNTFLRPTDVLWSSVEVVVVALMIMLVCTYYGYAAHGGPAGVGEAVGRAVRASMVVASI 251
YFNTFL P+D+LWS ++ +V+++ +MLV TYYGY AHGGP GVG AVG+AVR S++V +
Sbjct 201 YFNTFLIPSDLLWSFLQAIVMSIAVMLVHTYYGYNAHGGPVGVGIAVGQAVRTSLIVVVV 260
Query 252 AILVMTLAIYGQSPNFHLA 270
L ++LA+YG S NF+L+
Sbjct 261 ITLFISLAVYGASGNFNLS 279
Lambda K H
0.325 0.137 0.394
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 419877318148
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40