BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv1972
Length=191
Score E
Sequences producing significant alignments: (Bits) Value
gi|15609109|ref|NP_216488.1| mce associated membrane protein [My... 386 9e-106
gi|289443456|ref|ZP_06433200.1| MCE-associated membrane protein ... 384 5e-105
gi|289758082|ref|ZP_06517460.1| mce associated membrane protein ... 383 7e-105
gi|339294897|gb|AEJ47008.1| MCE associated membrane protein [Myc... 382 2e-104
gi|254364789|ref|ZP_04980835.1| conserved MCE associated membran... 377 4e-103
gi|326903579|gb|EGE50512.1| MCE-associated membrane protein [Myc... 357 5e-97
gi|183982892|ref|YP_001851183.1| Mce associated membrane protein... 223 1e-56
gi|118618288|ref|YP_906620.1| Mce associated membrane protein [M... 221 5e-56
gi|254820127|ref|ZP_05225128.1| hypothetical protein MintA_09381... 194 6e-48
gi|167970506|ref|ZP_02552783.1| MCE associated membrane protein ... 193 1e-47
gi|118467240|ref|YP_881730.1| hypothetical protein MAV_2538 [Myc... 192 2e-47
gi|254819944|ref|ZP_05224945.1| hypothetical protein MintA_08466... 192 2e-47
gi|120405550|ref|YP_955379.1| hypothetical protein Mvan_4598 [My... 189 2e-46
gi|126436736|ref|YP_001072427.1| hypothetical protein Mjls_4164 ... 185 4e-45
gi|145222695|ref|YP_001133373.1| hypothetical protein Mflv_2107 ... 179 3e-43
gi|145221245|ref|YP_001131923.1| hypothetical protein Mflv_0646 ... 178 3e-43
gi|120401540|ref|YP_951369.1| hypothetical protein Mvan_0519 [My... 176 2e-42
gi|315441860|ref|YP_004074739.1| hypothetical protein Mspyr1_017... 176 2e-42
gi|108798629|ref|YP_638826.1| hypothetical protein Mmcs_1660 [My... 176 2e-42
gi|296171128|ref|ZP_06852580.1| Mce associated membrane protein ... 175 3e-42
gi|315443159|ref|YP_004076038.1| protein conserved in bacteria (... 172 1e-41
gi|342857622|ref|ZP_08714278.1| hypothetical protein MCOL_02060 ... 172 3e-41
gi|183984028|ref|YP_001852319.1| Mce associated membrane protein... 166 2e-39
gi|118462309|ref|YP_881188.1| hypothetical protein MAV_1969 [Myc... 164 4e-39
gi|118619133|ref|YP_907465.1| Mce associated membrane protein [M... 163 1e-38
gi|240171812|ref|ZP_04750471.1| hypothetical protein MkanA1_2103... 157 1e-36
gi|126436889|ref|YP_001072580.1| hypothetical protein Mjls_4318 ... 155 2e-36
gi|108801052|ref|YP_641249.1| hypothetical protein Mmcs_4088 [My... 155 2e-36
gi|108798500|ref|YP_638697.1| hypothetical protein Mmcs_1530 [My... 155 3e-36
gi|119867600|ref|YP_937552.1| hypothetical protein Mkms_1553 [My... 154 9e-36
gi|118462830|ref|YP_881286.1| hypothetical protein MAV_2070 [Myc... 149 2e-34
gi|254774792|ref|ZP_05216308.1| hypothetical protein MaviaA2_089... 149 2e-34
gi|41408208|ref|NP_961044.1| hypothetical protein MAP2110c [Myco... 147 8e-34
gi|118472928|ref|YP_884765.1| hypothetical protein MSMEG_0352 [M... 145 4e-33
gi|342857458|ref|ZP_08714114.1| hypothetical protein MCOL_01240 ... 144 7e-33
gi|333989714|ref|YP_004522328.1| Mce associated membrane protein... 138 4e-31
gi|120401934|ref|YP_951763.1| hypothetical protein Mvan_0919 [My... 136 1e-30
gi|118473172|ref|YP_889454.1| hypothetical protein MSMEG_5208 [M... 124 5e-27
gi|226361011|ref|YP_002778789.1| hypothetical protein ROP_15970 ... 116 1e-24
gi|111018911|ref|YP_701883.1| hypothetical protein RHA1_ro01914 ... 115 3e-24
gi|254818319|ref|ZP_05223320.1| hypothetical protein MintA_00245... 114 8e-24
gi|333992917|ref|YP_004525531.1| hypothetical protein JDM601_427... 109 2e-22
gi|342860424|ref|ZP_08717075.1| hypothetical protein MCOL_16156 ... 108 4e-22
gi|333918563|ref|YP_004492144.1| hypothetical protein AS9A_0892 ... 107 6e-22
gi|108800620|ref|YP_640817.1| hypothetical protein Mmcs_3654 [My... 107 8e-22
gi|41406849|ref|NP_959685.1| hypothetical protein MAP0751c [Myco... 105 2e-21
gi|118464140|ref|YP_880199.1| hypothetical protein MAV_0938 [Myc... 104 8e-21
gi|111021676|ref|YP_704648.1| hypothetical protein RHA1_ro04704 ... 104 8e-21
gi|226364213|ref|YP_002781995.1| hypothetical protein ROP_48030 ... 103 1e-20
gi|126436244|ref|YP_001071935.1| hypothetical protein Mjls_3667 ... 103 1e-20
>gi|15609109|ref|NP_216488.1| mce associated membrane protein [Mycobacterium tuberculosis H37Rv]
gi|15841447|ref|NP_336484.1| hypothetical protein MT2024 [Mycobacterium tuberculosis CDC1551]
gi|148661781|ref|YP_001283304.1| putative Mce associated membrane protein [Mycobacterium tuberculosis
H37Ra]
53 more sequence titles
Length=191
Score = 386 bits (991), Expect = 9e-106, Method: Compositional matrix adjust.
Identities = 191/191 (100%), Positives = 191/191 (100%), Gaps = 0/191 (0%)
Query 1 MSVAVDSDAEDDAVSEIAEAAGVSPAPAKPSMSAPRRMLLFGLVVVVALAVLLCCWGFRV 60
MSVAVDSDAEDDAVSEIAEAAGVSPAPAKPSMSAPRRMLLFGLVVVVALAVLLCCWGFRV
Sbjct 1 MSVAVDSDAEDDAVSEIAEAAGVSPAPAKPSMSAPRRMLLFGLVVVVALAVLLCCWGFRV 60
Query 61 QRARHAQDQRGHFLQAARQCALNLTTIDWRNAEADVRRILDGATGEFYNDFAQRSQPFVE 120
QRARHAQDQRGHFLQAARQCALNLTTIDWRNAEADVRRILDGATGEFYNDFAQRSQPFVE
Sbjct 61 QRARHAQDQRGHFLQAARQCALNLTTIDWRNAEADVRRILDGATGEFYNDFAQRSQPFVE 120
Query 121 VLRHAKASTVGTITEAGLQTQTADTAQALVAVSVQTSNAGEADPVPRAWRMRITVQRVGD 180
VLRHAKASTVGTITEAGLQTQTADTAQALVAVSVQTSNAGEADPVPRAWRMRITVQRVGD
Sbjct 121 VLRHAKASTVGTITEAGLQTQTADTAQALVAVSVQTSNAGEADPVPRAWRMRITVQRVGD 180
Query 181 RVKVSDVGFVP 191
RVKVSDVGFVP
Sbjct 181 RVKVSDVGFVP 191
>gi|289443456|ref|ZP_06433200.1| MCE-associated membrane protein [Mycobacterium tuberculosis T46]
gi|289570062|ref|ZP_06450289.1| MCE-associated membrane protein [Mycobacterium tuberculosis T17]
gi|289416375|gb|EFD13615.1| MCE-associated membrane protein [Mycobacterium tuberculosis T46]
gi|289543816|gb|EFD47464.1| MCE-associated membrane protein [Mycobacterium tuberculosis T17]
Length=191
Score = 384 bits (985), Expect = 5e-105, Method: Compositional matrix adjust.
Identities = 190/191 (99%), Positives = 190/191 (99%), Gaps = 0/191 (0%)
Query 1 MSVAVDSDAEDDAVSEIAEAAGVSPAPAKPSMSAPRRMLLFGLVVVVALAVLLCCWGFRV 60
MSVAVDSDAEDDAVSEIAEAAGVSPAPAKPSMSAPRRMLLFGLVVVVALAVLLCCWGFRV
Sbjct 1 MSVAVDSDAEDDAVSEIAEAAGVSPAPAKPSMSAPRRMLLFGLVVVVALAVLLCCWGFRV 60
Query 61 QRARHAQDQRGHFLQAARQCALNLTTIDWRNAEADVRRILDGATGEFYNDFAQRSQPFVE 120
QRARHAQDQRGHFLQAARQCALNLTTIDWRNAEADVRRILDGATGEFYNDFAQRSQPFVE
Sbjct 61 QRARHAQDQRGHFLQAARQCALNLTTIDWRNAEADVRRILDGATGEFYNDFAQRSQPFVE 120
Query 121 VLRHAKASTVGTITEAGLQTQTADTAQALVAVSVQTSNAGEADPVPRAWRMRITVQRVGD 180
VLRHAKA TVGTITEAGLQTQTADTAQALVAVSVQTSNAGEADPVPRAWRMRITVQRVGD
Sbjct 121 VLRHAKAGTVGTITEAGLQTQTADTAQALVAVSVQTSNAGEADPVPRAWRMRITVQRVGD 180
Query 181 RVKVSDVGFVP 191
RVKVSDVGFVP
Sbjct 181 RVKVSDVGFVP 191
>gi|289758082|ref|ZP_06517460.1| mce associated membrane protein [Mycobacterium tuberculosis T85]
gi|294996894|ref|ZP_06802585.1| hypothetical protein Mtub2_20908 [Mycobacterium tuberculosis
210]
gi|289713646|gb|EFD77658.1| mce associated membrane protein [Mycobacterium tuberculosis T85]
gi|339298520|gb|AEJ50630.1| MCE associated membrane protein [Mycobacterium tuberculosis CCDC5180]
Length=191
Score = 383 bits (983), Expect = 7e-105, Method: Compositional matrix adjust.
Identities = 190/191 (99%), Positives = 190/191 (99%), Gaps = 0/191 (0%)
Query 1 MSVAVDSDAEDDAVSEIAEAAGVSPAPAKPSMSAPRRMLLFGLVVVVALAVLLCCWGFRV 60
MSVAVDSDAEDDAVSEIAEAAGVSPAPAKPSMSAPRRMLLFGLVVVVALAVLLCCWGFRV
Sbjct 1 MSVAVDSDAEDDAVSEIAEAAGVSPAPAKPSMSAPRRMLLFGLVVVVALAVLLCCWGFRV 60
Query 61 QRARHAQDQRGHFLQAARQCALNLTTIDWRNAEADVRRILDGATGEFYNDFAQRSQPFVE 120
QRARHAQDQRGHFLQAARQCALNLTTIDWRNAEADVRRILDGATGEFYNDFAQRSQPFVE
Sbjct 61 QRARHAQDQRGHFLQAARQCALNLTTIDWRNAEADVRRILDGATGEFYNDFAQRSQPFVE 120
Query 121 VLRHAKASTVGTITEAGLQTQTADTAQALVAVSVQTSNAGEADPVPRAWRMRITVQRVGD 180
VLR AKASTVGTITEAGLQTQTADTAQALVAVSVQTSNAGEADPVPRAWRMRITVQRVGD
Sbjct 121 VLRQAKASTVGTITEAGLQTQTADTAQALVAVSVQTSNAGEADPVPRAWRMRITVQRVGD 180
Query 181 RVKVSDVGFVP 191
RVKVSDVGFVP
Sbjct 181 RVKVSDVGFVP 191
>gi|339294897|gb|AEJ47008.1| MCE associated membrane protein [Mycobacterium tuberculosis CCDC5079]
Length=191
Score = 382 bits (981), Expect = 2e-104, Method: Compositional matrix adjust.
Identities = 189/191 (99%), Positives = 190/191 (99%), Gaps = 0/191 (0%)
Query 1 MSVAVDSDAEDDAVSEIAEAAGVSPAPAKPSMSAPRRMLLFGLVVVVALAVLLCCWGFRV 60
MSVAVDSDAEDDAVSEIAEAAGVSPAPAKPSMSAPRRMLLFGLVVVVALAVLLCCWGFRV
Sbjct 1 MSVAVDSDAEDDAVSEIAEAAGVSPAPAKPSMSAPRRMLLFGLVVVVALAVLLCCWGFRV 60
Query 61 QRARHAQDQRGHFLQAARQCALNLTTIDWRNAEADVRRILDGATGEFYNDFAQRSQPFVE 120
QRARHAQDQRGHFLQAARQCALNLTTIDWRNAEADVRRILDGATGEFYNDFAQRSQPFVE
Sbjct 61 QRARHAQDQRGHFLQAARQCALNLTTIDWRNAEADVRRILDGATGEFYNDFAQRSQPFVE 120
Query 121 VLRHAKASTVGTITEAGLQTQTADTAQALVAVSVQTSNAGEADPVPRAWRMRITVQRVGD 180
VLR AKASTVGTITEAGLQTQTADTAQALVAVSVQTSNAGEADPVPRAWRMRITVQRVGD
Sbjct 121 VLRQAKASTVGTITEAGLQTQTADTAQALVAVSVQTSNAGEADPVPRAWRMRITVQRVGD 180
Query 181 RVKVSDVGFVP 191
R+KVSDVGFVP
Sbjct 181 RLKVSDVGFVP 191
>gi|254364789|ref|ZP_04980835.1| conserved MCE associated membrane protein [Mycobacterium tuberculosis
str. Haarlem]
gi|254550993|ref|ZP_05141440.1| hypothetical protein Mtube_11111 [Mycobacterium tuberculosis
'98-R604 INH-RIF-EM']
gi|134150303|gb|EBA42348.1| conserved MCE associated membrane protein [Mycobacterium tuberculosis
str. Haarlem]
Length=187
Score = 377 bits (968), Expect = 4e-103, Method: Compositional matrix adjust.
Identities = 186/187 (99%), Positives = 187/187 (100%), Gaps = 0/187 (0%)
Query 5 VDSDAEDDAVSEIAEAAGVSPAPAKPSMSAPRRMLLFGLVVVVALAVLLCCWGFRVQRAR 64
+DSDAEDDAVSEIAEAAGVSPAPAKPSMSAPRRMLLFGLVVVVALAVLLCCWGFRVQRAR
Sbjct 1 MDSDAEDDAVSEIAEAAGVSPAPAKPSMSAPRRMLLFGLVVVVALAVLLCCWGFRVQRAR 60
Query 65 HAQDQRGHFLQAARQCALNLTTIDWRNAEADVRRILDGATGEFYNDFAQRSQPFVEVLRH 124
HAQDQRGHFLQAARQCALNLTTIDWRNAEADVRRILDGATGEFYNDFAQRSQPFVEVLRH
Sbjct 61 HAQDQRGHFLQAARQCALNLTTIDWRNAEADVRRILDGATGEFYNDFAQRSQPFVEVLRH 120
Query 125 AKASTVGTITEAGLQTQTADTAQALVAVSVQTSNAGEADPVPRAWRMRITVQRVGDRVKV 184
AKASTVGTITEAGLQTQTADTAQALVAVSVQTSNAGEADPVPRAWRMRITVQRVGDRVKV
Sbjct 121 AKASTVGTITEAGLQTQTADTAQALVAVSVQTSNAGEADPVPRAWRMRITVQRVGDRVKV 180
Query 185 SDVGFVP 191
SDVGFVP
Sbjct 181 SDVGFVP 187
>gi|326903579|gb|EGE50512.1| MCE-associated membrane protein [Mycobacterium tuberculosis W-148]
Length=190
Score = 357 bits (916), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 184/191 (97%), Positives = 185/191 (97%), Gaps = 1/191 (0%)
Query 1 MSVAVDSDAEDDAVSEIAEAAGVSPAPAKPSMSAPRRMLLFGLVVVVALAVLLCCWGFRV 60
MSVAVDSDAEDDAVSEIAEAAGVSPAPAKPSMSAPRRMLLFGLVVV +L CCWGFRV
Sbjct 1 MSVAVDSDAEDDAVSEIAEAAGVSPAPAKPSMSAPRRMLLFGLVVVALAVLL-CCWGFRV 59
Query 61 QRARHAQDQRGHFLQAARQCALNLTTIDWRNAEADVRRILDGATGEFYNDFAQRSQPFVE 120
QRARHAQDQRGHFLQAARQCALNLTTIDWRNAEADVRRILDGATGEFYNDFAQRSQPFVE
Sbjct 60 QRARHAQDQRGHFLQAARQCALNLTTIDWRNAEADVRRILDGATGEFYNDFAQRSQPFVE 119
Query 121 VLRHAKASTVGTITEAGLQTQTADTAQALVAVSVQTSNAGEADPVPRAWRMRITVQRVGD 180
VLR AKASTVGTITEAGLQTQTADTAQALVAVSVQTSNAGEADPVPRAWRMRITVQRVGD
Sbjct 120 VLRQAKASTVGTITEAGLQTQTADTAQALVAVSVQTSNAGEADPVPRAWRMRITVQRVGD 179
Query 181 RVKVSDVGFVP 191
RVKVSDVGFVP
Sbjct 180 RVKVSDVGFVP 190
>gi|183982892|ref|YP_001851183.1| Mce associated membrane protein [Mycobacterium marinum M]
gi|183176218|gb|ACC41328.1| conserved Mce associated membrane protein [Mycobacterium marinum
M]
Length=187
Score = 223 bits (568), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 111/164 (68%), Positives = 132/164 (81%), Gaps = 0/164 (0%)
Query 28 AKPSMSAPRRMLLFGLVVVVALAVLLCCWGFRVQRARHAQDQRGHFLQAARQCALNLTTI 87
A+ SAP R LFGL VVVALA L +GFRV A AQ ++G L+ ARQ ALNLTTI
Sbjct 24 AEEHRSAPLRATLFGLAVVVALAAPLGWFGFRVHLAGQAQARQGEALRVARQVALNLTTI 83
Query 88 DWRNAEADVRRILDGATGEFYNDFAQRSQPFVEVLRHAKASTVGTITEAGLQTQTADTAQ 147
DW++ ++DV RILD ATGEFYNDFA+RS+PF+EVLR AKA+TVGT+TEAGL+++TADTAQ
Sbjct 84 DWQHGDSDVHRILDSATGEFYNDFAERSKPFIEVLRQAKATTVGTVTEAGLESETADTAQ 143
Query 148 ALVAVSVQTSNAGEADPVPRAWRMRITVQRVGDRVKVSDVGFVP 191
ALVAVSVQTSN GE DP+PR WRMRIT++RV D K + VGFVP
Sbjct 144 ALVAVSVQTSNGGEPDPMPRIWRMRITLERVDDGFKAAKVGFVP 187
>gi|118618288|ref|YP_906620.1| Mce associated membrane protein [Mycobacterium ulcerans Agy99]
gi|118570398|gb|ABL05149.1| conserved Mce associated membrane protein [Mycobacterium ulcerans
Agy99]
Length=187
Score = 221 bits (562), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 110/164 (68%), Positives = 132/164 (81%), Gaps = 0/164 (0%)
Query 28 AKPSMSAPRRMLLFGLVVVVALAVLLCCWGFRVQRARHAQDQRGHFLQAARQCALNLTTI 87
A+ SAP R LFGL VVVALA L +GFRV A AQ ++G L+ ARQ ALNLTTI
Sbjct 24 AEKHRSAPLRATLFGLAVVVALAAPLGWFGFRVHLAGQAQARQGQALRVARQVALNLTTI 83
Query 88 DWRNAEADVRRILDGATGEFYNDFAQRSQPFVEVLRHAKASTVGTITEAGLQTQTADTAQ 147
DW++ ++DV RILD ATGEFYNDFA+RS+PF+EVLR AKA+TVGT+TEAGL+++TADTAQ
Sbjct 84 DWQHGDSDVHRILDSATGEFYNDFAERSKPFIEVLRQAKATTVGTVTEAGLESETADTAQ 143
Query 148 ALVAVSVQTSNAGEADPVPRAWRMRITVQRVGDRVKVSDVGFVP 191
ALVAVSVQTSN GE DP+PR WR+RIT++RV D K + VGFVP
Sbjct 144 ALVAVSVQTSNGGEPDPMPRIWRIRITLERVDDGFKAAKVGFVP 187
>gi|254820127|ref|ZP_05225128.1| hypothetical protein MintA_09381 [Mycobacterium intracellulare
ATCC 13950]
Length=201
Score = 194 bits (492), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 102/185 (56%), Positives = 134/185 (73%), Gaps = 1/185 (0%)
Query 8 DAEDDAV-SEIAEAAGVSPAPAKPSMSAPRRMLLFGLVVVVALAVLLCCWGFRVQRARHA 66
DA+ D + S+I S + S+ R + L +VVAL+VL+ GFR + A
Sbjct 17 DADGDTIESDIDPTENASTPRSAESVFHLRPTIRVCLTIVVALSVLVGWLGFRSYQTHQA 76
Query 67 QDQRGHFLQAARQCALNLTTIDWRNAEADVRRILDGATGEFYNDFAQRSQPFVEVLRHAK 126
Q QR FLQ ARQ ALNLTTIDWR+A+ DV+RILDGATG+ ++DFA+RS+PF+EV++ AK
Sbjct 77 QIQRNQFLQVARQGALNLTTIDWRHADTDVQRILDGATGQLHDDFAKRSKPFIEVVKQAK 136
Query 127 ASTVGTITEAGLQTQTADTAQALVAVSVQTSNAGEADPVPRAWRMRITVQRVGDRVKVSD 186
A TVGTI+ AGL+++TADTAQ LVA++VQTS+A +D PRAWRMRI VQ+ +VKVS+
Sbjct 137 AITVGTISSAGLESETADTAQVLVAMTVQTSDAAASDQAPRAWRMRIFVQKTDGQVKVSN 196
Query 187 VGFVP 191
V FVP
Sbjct 197 VEFVP 201
>gi|167970506|ref|ZP_02552783.1| MCE associated membrane protein [Mycobacterium tuberculosis H37Ra]
Length=96
Score = 193 bits (490), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 95/96 (99%), Positives = 96/96 (100%), Gaps = 0/96 (0%)
Query 96 VRRILDGATGEFYNDFAQRSQPFVEVLRHAKASTVGTITEAGLQTQTADTAQALVAVSVQ 155
+RRILDGATGEFYNDFAQRSQPFVEVLRHAKASTVGTITEAGLQTQTADTAQALVAVSVQ
Sbjct 1 MRRILDGATGEFYNDFAQRSQPFVEVLRHAKASTVGTITEAGLQTQTADTAQALVAVSVQ 60
Query 156 TSNAGEADPVPRAWRMRITVQRVGDRVKVSDVGFVP 191
TSNAGEADPVPRAWRMRITVQRVGDRVKVSDVGFVP
Sbjct 61 TSNAGEADPVPRAWRMRITVQRVGDRVKVSDVGFVP 96
>gi|118467240|ref|YP_881730.1| hypothetical protein MAV_2538 [Mycobacterium avium 104]
gi|118168527|gb|ABK69424.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=192
Score = 192 bits (488), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 96/181 (54%), Positives = 130/181 (72%), Gaps = 0/181 (0%)
Query 11 DDAVSEIAEAAGVSPAPAKPSMSAPRRMLLFGLVVVVALAVLLCCWGFRVQRARHAQDQR 70
D +V + AE PAPAK S +FGLV VV LA L +G++ ++ AQ QR
Sbjct 12 DASVDDAAEPDAEDPAPAKKLRSPALLATVFGLVTVVGLAALGGWFGYQTYQSHQAQQQR 71
Query 71 GHFLQAARQCALNLTTIDWRNAEADVRRILDGATGEFYNDFAQRSQPFVEVLRHAKASTV 130
++ RQ ALNLTTIDW++A+ADV+RILD ATG FY+DF+ RS+PF++V++ A++ +V
Sbjct 72 ELMVRIGRQGALNLTTIDWQHADADVQRILDSATGTFYDDFSHRSKPFIDVVKKAQSKSV 131
Query 131 GTITEAGLQTQTADTAQALVAVSVQTSNAGEADPVPRAWRMRITVQRVGDRVKVSDVGFV 190
GTITEAGL++Q+ AQ LVAVSV+TSN G A+ PR WRMR+ VQ+VG+ +KVS+V FV
Sbjct 132 GTITEAGLESQSGSEAQVLVAVSVKTSNLGAAEQDPRHWRMRVIVQKVGNDMKVSNVAFV 191
Query 191 P 191
P
Sbjct 192 P 192
>gi|254819944|ref|ZP_05224945.1| hypothetical protein MintA_08466 [Mycobacterium intracellulare
ATCC 13950]
Length=243
Score = 192 bits (488), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 95/181 (53%), Positives = 130/181 (72%), Gaps = 0/181 (0%)
Query 11 DDAVSEIAEAAGVSPAPAKPSMSAPRRMLLFGLVVVVALAVLLCCWGFRVQRARHAQDQR 70
D +V + AE P PAK S +FGLV VV LA L +G++ ++ AQ QR
Sbjct 63 DASVDDAAEPDAEDPVPAKKLRSPALLATVFGLVTVVGLAALGGWFGYQTYQSHQAQQQR 122
Query 71 GHFLQAARQCALNLTTIDWRNAEADVRRILDGATGEFYNDFAQRSQPFVEVLRHAKASTV 130
++ RQ ALNLTTIDW++A+ADV+RILD ATG FY+DF+ RS+PF++V++ A++ +V
Sbjct 123 ELMVRIGRQGALNLTTIDWQHADADVQRILDSATGTFYDDFSHRSKPFIDVVKKAQSKSV 182
Query 131 GTITEAGLQTQTADTAQALVAVSVQTSNAGEADPVPRAWRMRITVQRVGDRVKVSDVGFV 190
GTITEAGL++Q+ + AQ LVAVSV+TSN G A+ PR WRMR+ VQ+VG+ +KVS+V FV
Sbjct 183 GTITEAGLESQSGNEAQVLVAVSVKTSNLGAAEQDPRHWRMRVIVQKVGNDMKVSNVAFV 242
Query 191 P 191
P
Sbjct 243 P 243
>gi|120405550|ref|YP_955379.1| hypothetical protein Mvan_4598 [Mycobacterium vanbaalenii PYR-1]
gi|119958368|gb|ABM15373.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1]
Length=244
Score = 189 bits (480), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 95/165 (58%), Positives = 122/165 (74%), Gaps = 1/165 (0%)
Query 27 PAKPSMSAPRRMLLFGLVVVVALAVLLCCWGFRVQRARHAQDQRGHFLQAARQCALNLTT 86
P P MS + L+ GLV V+ALA L G+R A + +R FLQ RQ ALNLTT
Sbjct 81 PRSP-MSHVKVALIAGLVGVLALAGLTAWMGYRTYEANRDEHRRELFLQVGRQGALNLTT 139
Query 87 IDWRNAEADVRRILDGATGEFYNDFAQRSQPFVEVLRHAKASTVGTITEAGLQTQTADTA 146
IDW+NAEADV+RILD ATG FY+DF QR+QPFVEV++ A++ +VGT+ EAGL++ A+ A
Sbjct 140 IDWQNAEADVQRILDSATGTFYDDFQQRAQPFVEVVKQAQSKSVGTVAEAGLESAGANEA 199
Query 147 QALVAVSVQTSNAGEADPVPRAWRMRITVQRVGDRVKVSDVGFVP 191
Q LVAV+V+TSNAG + PRAWRMRI+V+++GD KVS+V FVP
Sbjct 200 QVLVAVTVKTSNAGAPEQEPRAWRMRISVEKIGDDAKVSNVEFVP 244
>gi|126436736|ref|YP_001072427.1| hypothetical protein Mjls_4164 [Mycobacterium sp. JLS]
gi|126236536|gb|ABN99936.1| conserved hypothetical protein [Mycobacterium sp. JLS]
Length=202
Score = 185 bits (469), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 87/160 (55%), Positives = 126/160 (79%), Gaps = 1/160 (0%)
Query 33 SAPRRM-LLFGLVVVVALAVLLCCWGFRVQRARHAQDQRGHFLQAARQCALNLTTIDWRN 91
+AP+R+ L+ GL +V+ L L G++ ++ A QR F+Q ARQ ALNLTTID+ +
Sbjct 43 AAPKRLALVAGLSLVIVLGALSGWLGYQAYQSHEADKQRREFVQVARQGALNLTTIDYEH 102
Query 92 AEADVRRILDGATGEFYNDFAQRSQPFVEVLRHAKASTVGTITEAGLQTQTADTAQALVA 151
A+ DV+RIL+ ATG+F++DFAQRSQPF++V++ A++ +VGTITEA L++++ D AQ +VA
Sbjct 103 ADTDVQRILESATGQFHDDFAQRSQPFLDVVKQAQSKSVGTITEAALESESGDEAQVIVA 162
Query 152 VSVQTSNAGEADPVPRAWRMRITVQRVGDRVKVSDVGFVP 191
V+V+TSN G A+ PRAWRMR+TVQ+VG+ +KVS+VGFVP
Sbjct 163 VTVKTSNVGAAEQEPRAWRMRLTVQKVGEDMKVSNVGFVP 202
>gi|145222695|ref|YP_001133373.1| hypothetical protein Mflv_2107 [Mycobacterium gilvum PYR-GCK]
gi|145215181|gb|ABP44585.1| hypothetical protein Mflv_2107 [Mycobacterium gilvum PYR-GCK]
Length=225
Score = 179 bits (453), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 92/182 (51%), Positives = 125/182 (69%), Gaps = 2/182 (1%)
Query 10 EDDAVSEIAEAAGVSPAPAKPSMSAPRRMLLFGLVVVVALAVLLCCWGFRVQRARHAQDQ 69
EDD+V A+ PA +MS + L+ GLV V+ALA L G++ + A++Q
Sbjct 46 EDDSVD--ADVDETDATPATGAMSHIKLALIAGLVGVLALAGLAGWLGYQTYESHQAEEQ 103
Query 70 RGHFLQAARQCALNLTTIDWRNAEADVRRILDGATGEFYNDFAQRSQPFVEVLRHAKAST 129
R F+Q RQ ALNLTTI+W +AEADV+RILD ATG FY+DF QR++PFV+V++ A++ +
Sbjct 104 RNLFVQVGRQGALNLTTINWESAEADVQRILDSATGTFYDDFQQRAEPFVQVVKQAQSKS 163
Query 130 VGTITEAGLQTQTADTAQALVAVSVQTSNAGEADPVPRAWRMRITVQRVGDRVKVSDVGF 189
GTI EAGL++ T Q LVAV+V+T+NAG + PRAWRMRI+VQ + KVS+V F
Sbjct 164 EGTIAEAGLESATDSEGQVLVAVTVRTTNAGTPEQQPRAWRMRISVQEIDGDAKVSNVEF 223
Query 190 VP 191
VP
Sbjct 224 VP 225
>gi|145221245|ref|YP_001131923.1| hypothetical protein Mflv_0646 [Mycobacterium gilvum PYR-GCK]
gi|145213731|gb|ABP43135.1| conserved hypothetical protein [Mycobacterium gilvum PYR-GCK]
Length=221
Score = 178 bits (452), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 86/158 (55%), Positives = 116/158 (74%), Gaps = 1/158 (0%)
Query 35 PRRM-LLFGLVVVVALAVLLCCWGFRVQRARHAQDQRGHFLQAARQCALNLTTIDWRNAE 93
P+R+ L+ G V V + L GF+ +A A +QR F+Q RQ ALNLTTIDW++A+
Sbjct 64 PQRLALVMGSVAAVTMGALTSWLGFQTHQAHQASEQRQQFVQVGRQGALNLTTIDWQHAD 123
Query 94 ADVRRILDGATGEFYNDFAQRSQPFVEVLRHAKASTVGTITEAGLQTQTADTAQALVAVS 153
DV+RILD ATG FY++F+QRSQPF++V+ K+ +VGTITEAGL++ + DTAQ LVAVS
Sbjct 124 VDVKRILDSATGTFYDEFSQRSQPFIDVVNKVKSKSVGTITEAGLESHSRDTAQVLVAVS 183
Query 154 VQTSNAGEADPVPRAWRMRITVQRVGDRVKVSDVGFVP 191
V+T+ + PRAWRMR+TVQ+VG+ KV+DV FVP
Sbjct 184 VKTTVGDGPEQEPRAWRMRVTVQKVGNDAKVADVEFVP 221
>gi|120401540|ref|YP_951369.1| hypothetical protein Mvan_0519 [Mycobacterium vanbaalenii PYR-1]
gi|119954358|gb|ABM11363.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1]
Length=221
Score = 176 bits (445), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 85/157 (55%), Positives = 115/157 (74%), Gaps = 1/157 (0%)
Query 35 PRRM-LLFGLVVVVALAVLLCCWGFRVQRARHAQDQRGHFLQAARQCALNLTTIDWRNAE 93
P+R+ L+ G V V + L GF+ +A A +QR F+Q RQ ALNLTTIDW++A+
Sbjct 64 PQRLALVMGSVAAVTMGALTSWLGFQTHQAHQASEQRQQFVQVGRQGALNLTTIDWQHAD 123
Query 94 ADVRRILDGATGEFYNDFAQRSQPFVEVLRHAKASTVGTITEAGLQTQTADTAQALVAVS 153
DV+RILD ATG FY++F+QRSQPF++V+ K+ +VGTITEAGL++ + DTAQ LVAVS
Sbjct 124 VDVKRILDSATGTFYDEFSQRSQPFIDVVNKVKSKSVGTITEAGLESHSRDTAQVLVAVS 183
Query 154 VQTSNAGEADPVPRAWRMRITVQRVGDRVKVSDVGFV 190
V+T+ + PRAWRMR+TVQ+VG+ KV+DV FV
Sbjct 184 VKTTVGDGPEQEPRAWRMRVTVQKVGNDAKVADVEFV 220
>gi|315441860|ref|YP_004074739.1| hypothetical protein Mspyr1_01780 [Mycobacterium sp. Spyr1]
gi|315260163|gb|ADT96904.1| hypothetical protein Mspyr1_01780 [Mycobacterium sp. Spyr1]
Length=221
Score = 176 bits (445), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 85/157 (55%), Positives = 115/157 (74%), Gaps = 1/157 (0%)
Query 35 PRRM-LLFGLVVVVALAVLLCCWGFRVQRARHAQDQRGHFLQAARQCALNLTTIDWRNAE 93
P+R+ L+ G V V + L GF+ +A A +QR F+Q RQ ALNLTTIDW++A+
Sbjct 64 PQRLALVMGSVAAVTMGALTSWLGFQTHQAHQASEQRQQFVQVGRQGALNLTTIDWQHAD 123
Query 94 ADVRRILDGATGEFYNDFAQRSQPFVEVLRHAKASTVGTITEAGLQTQTADTAQALVAVS 153
DV+RILD ATG FY++F+QRSQPF++V+ K+ +VGTITEAGL++ + DTAQ LVAVS
Sbjct 124 VDVKRILDSATGTFYDEFSQRSQPFIDVVNKVKSKSVGTITEAGLESHSRDTAQVLVAVS 183
Query 154 VQTSNAGEADPVPRAWRMRITVQRVGDRVKVSDVGFV 190
V+T+ + PRAWRMR+TVQ+VG+ KV+DV FV
Sbjct 184 VKTTVGDGPEQEPRAWRMRVTVQKVGNDAKVADVEFV 220
>gi|108798629|ref|YP_638826.1| hypothetical protein Mmcs_1660 [Mycobacterium sp. MCS]
gi|119867725|ref|YP_937677.1| hypothetical protein Mkms_1684 [Mycobacterium sp. KMS]
gi|126434226|ref|YP_001069917.1| hypothetical protein Mjls_1633 [Mycobacterium sp. JLS]
gi|108769048|gb|ABG07770.1| conserved hypothetical protein [Mycobacterium sp. MCS]
gi|119693814|gb|ABL90887.1| conserved hypothetical protein [Mycobacterium sp. KMS]
gi|126234026|gb|ABN97426.1| conserved hypothetical protein [Mycobacterium sp. JLS]
Length=221
Score = 176 bits (445), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 85/157 (55%), Positives = 115/157 (74%), Gaps = 1/157 (0%)
Query 35 PRRM-LLFGLVVVVALAVLLCCWGFRVQRARHAQDQRGHFLQAARQCALNLTTIDWRNAE 93
P+R+ L+ G V V + L GF+ +A A +QR F+Q RQ ALNLTTIDW++A+
Sbjct 64 PQRLALVMGSVAAVTMGALTSWLGFQTHQAHQASEQRQQFVQVGRQGALNLTTIDWQHAD 123
Query 94 ADVRRILDGATGEFYNDFAQRSQPFVEVLRHAKASTVGTITEAGLQTQTADTAQALVAVS 153
DV+RILD ATG FY++F+QRSQPF++V+ K+ +VGTITEAGL++ + DTAQ LVAVS
Sbjct 124 VDVKRILDSATGTFYDEFSQRSQPFIDVVNKVKSKSVGTITEAGLESHSRDTAQVLVAVS 183
Query 154 VQTSNAGEADPVPRAWRMRITVQRVGDRVKVSDVGFV 190
V+T+ + PRAWRMR+TVQ+VG+ KV+DV FV
Sbjct 184 VKTTVGDGPEQEPRAWRMRVTVQKVGNDAKVADVEFV 220
>gi|296171128|ref|ZP_06852580.1| Mce associated membrane protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295894318|gb|EFG74072.1| Mce associated membrane protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=186
Score = 175 bits (443), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 97/185 (53%), Positives = 127/185 (69%), Gaps = 2/185 (1%)
Query 9 AEDDAVSEIAEAAG-VSPAPAKPSMSAPRRMLL-FGLVVVVALAVLLCCWGFRVQRARHA 66
A+D A +E+ G V P + + AP R+ L GLV V AL L G RA A
Sbjct 2 ADDVATAELTGPPGEVDDGPEERAPLAPVRLALAVGLVTVAALTGLAGWAGLCAYRAHEA 61
Query 67 QDQRGHFLQAARQCALNLTTIDWRNAEADVRRILDGATGEFYNDFAQRSQPFVEVLRHAK 126
Q+QR FLQA RQ ALNLTT+D+R A+ADVRRIL GATG Y++F+QRSQPF++VL +
Sbjct 62 QEQRALFLQAGRQGALNLTTVDFREADADVRRILAGATGRLYDNFSQRSQPFIDVLLRTQ 121
Query 127 ASTVGTITEAGLQTQTADTAQALVAVSVQTSNAGEADPVPRAWRMRITVQRVGDRVKVSD 186
+ +VGT+TEAG+++Q D A+ LVAV+V+TSNA A P AWRMR++V+++ VKVSD
Sbjct 122 SKSVGTVTEAGIESQAGDRAEVLVAVTVRTSNAAAAQQEPHAWRMRLSVRKIDGVVKVSD 181
Query 187 VGFVP 191
V FVP
Sbjct 182 VEFVP 186
>gi|315443159|ref|YP_004076038.1| protein conserved in bacteria (DUF2133) [Mycobacterium sp. Spyr1]
gi|315261462|gb|ADT98203.1| Uncharacterized protein conserved in bacteria (DUF2133) [Mycobacterium
sp. Spyr1]
Length=218
Score = 172 bits (437), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 85/164 (52%), Positives = 117/164 (72%), Gaps = 0/164 (0%)
Query 28 AKPSMSAPRRMLLFGLVVVVALAVLLCCWGFRVQRARHAQDQRGHFLQAARQCALNLTTI 87
AK S + L+ GLV V+ALA L G++ + A+++R F+Q RQ ALNLTTI
Sbjct 55 AKAGRSPVKLALIAGLVAVLALAGLAGWLGYQTYESHRAEERRNLFVQVGRQGALNLTTI 114
Query 88 DWRNAEADVRRILDGATGEFYNDFAQRSQPFVEVLRHAKASTVGTITEAGLQTQTADTAQ 147
+W +AEADV+RILD ATG FY+DF QR++PFV+V++ A++ + G+I EAGL++ T Q
Sbjct 115 NWESAEADVQRILDSATGTFYDDFQQRAEPFVQVVKQAQSKSEGSIAEAGLESATDTGGQ 174
Query 148 ALVAVSVQTSNAGEADPVPRAWRMRITVQRVGDRVKVSDVGFVP 191
LVAV+V+T+NAG A+ PRAWRMRI+VQ + KVS+V FVP
Sbjct 175 VLVAVTVRTTNAGSAEQQPRAWRMRISVQEIDGEAKVSNVEFVP 218
>gi|342857622|ref|ZP_08714278.1| hypothetical protein MCOL_02060 [Mycobacterium colombiense CECT
3035]
gi|342134955|gb|EGT88121.1| hypothetical protein MCOL_02060 [Mycobacterium colombiense CECT
3035]
Length=221
Score = 172 bits (435), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 86/166 (52%), Positives = 117/166 (71%), Gaps = 0/166 (0%)
Query 26 APAKPSMSAPRRMLLFGLVVVVALAVLLCCWGFRVQRARHAQDQRGHFLQAARQCALNLT 85
A A+ S R + GL ++AL L G+ + R A+ QR FL +Q ALNLT
Sbjct 56 ASARIGTSGFRLAVAVGLGAILALGGLAGWLGYDTYQGRQAELQRNRFLAVGKQGALNLT 115
Query 86 TIDWRNAEADVRRILDGATGEFYNDFAQRSQPFVEVLRHAKASTVGTITEAGLQTQTADT 145
TI++ A ADV+RILD ATG+FY+DF++R+ F++V++ A+A T G+ITEAG+++ + D+
Sbjct 116 TINYTQANADVQRILDSATGQFYDDFSKRAPAFIDVVKQAQAKTQGSITEAGVESISGDS 175
Query 146 AQALVAVSVQTSNAGEADPVPRAWRMRITVQRVGDRVKVSDVGFVP 191
A+ LVAV+V TSNAG AD PR WRMRI VQ+VGD VKVS+VGFVP
Sbjct 176 ARVLVAVAVDTSNAGAADQSPRHWRMRIDVQKVGDTVKVSNVGFVP 221
>gi|183984028|ref|YP_001852319.1| Mce associated membrane protein [Mycobacterium marinum M]
gi|183177354|gb|ACC42464.1| conserved Mce associated membrane protein [Mycobacterium marinum
M]
Length=237
Score = 166 bits (419), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 87/183 (48%), Positives = 121/183 (67%), Gaps = 7/183 (3%)
Query 10 EDDAVSEIAEAAGVSPAPAKPSMSAPRRMLLFGLVVVVALAVLLCCW-GFRVQRARHAQD 68
EDDA + E PAP+K R+ + + V L W GF ++ A
Sbjct 61 EDDAQASDGEQESPKPAPSK------VRLAIVVGLAAVVAMAALASWFGFHAYQSHQADQ 114
Query 69 QRGHFLQAARQCALNLTTIDWRNAEADVRRILDGATGEFYNDFAQRSQPFVEVLRHAKAS 128
QR ++Q ARQ A+NLTTIDW + +AD+ RIL+ ATG FY+DF +RS+PF++V++H ++
Sbjct 115 QRKLYVQVARQGAINLTTIDWEHVDADIERILNSATGTFYDDFQRRSKPFIQVVQHFQSK 174
Query 129 TVGTITEAGLQTQTADTAQALVAVSVQTSNAGEADPVPRAWRMRITVQRVGDRVKVSDVG 188
+VGTIT A L++++ D AQ LVAVSV+T+ AG + PRAWRMRITVQ+VGD KV++V
Sbjct 175 SVGTITAAALESESDDAAQVLVAVSVKTTTAGAPEQRPRAWRMRITVQQVGDEAKVANVE 234
Query 189 FVP 191
FVP
Sbjct 235 FVP 237
>gi|118462309|ref|YP_881188.1| hypothetical protein MAV_1969 [Mycobacterium avium 104]
gi|118163596|gb|ABK64493.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=148
Score = 164 bits (416), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 78/148 (53%), Positives = 107/148 (73%), Gaps = 0/148 (0%)
Query 44 VVVVALAVLLCCWGFRVQRARHAQDQRGHFLQAARQCALNLTTIDWRNAEADVRRILDGA 103
++VV L L +R ++ A +QR F+Q RQ ALNLTTIDW++A+ DV+RILD A
Sbjct 1 MLVVVLGGLTGWLAYRGYQSHQADEQRNMFVQVGRQGALNLTTIDWQHADKDVQRILDSA 60
Query 104 TGEFYNDFAQRSQPFVEVLRHAKASTVGTITEAGLQTQTADTAQALVAVSVQTSNAGEAD 163
TG FY+DF +RS PF+EV++ A++ + G +TEAGL+++T + Q LVAV+V TSNAG +
Sbjct 61 TGTFYDDFQKRSGPFIEVVKKAQSKSEGKVTEAGLESRTENEGQVLVAVTVNTSNAGAPE 120
Query 164 PVPRAWRMRITVQRVGDRVKVSDVGFVP 191
PR+WRMRITVQ+V + KVS V FVP
Sbjct 121 QEPRSWRMRITVQKVNEEAKVSKVEFVP 148
>gi|118619133|ref|YP_907465.1| Mce associated membrane protein [Mycobacterium ulcerans Agy99]
gi|118571243|gb|ABL05994.1| conserved Mce associated membrane protein [Mycobacterium ulcerans
Agy99]
Length=233
Score = 163 bits (412), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 86/183 (47%), Positives = 120/183 (66%), Gaps = 7/183 (3%)
Query 10 EDDAVSEIAEAAGVSPAPAKPSMSAPRRMLLFGLVVVVALAVLLCCW-GFRVQRARHAQD 68
EDDA + E PAP+K R+ + + V L W GF ++ A
Sbjct 57 EDDAQASDGEQESPKPAPSK------VRLAIVVGLAAVVAMAALASWFGFHAYQSHQADQ 110
Query 69 QRGHFLQAARQCALNLTTIDWRNAEADVRRILDGATGEFYNDFAQRSQPFVEVLRHAKAS 128
QR ++Q ARQ A+NLTTIDW + +AD+ RIL+ ATG FY+DF +RS+PF++V++H ++
Sbjct 111 QRKLYVQVARQGAINLTTIDWEHVDADIERILNSATGTFYDDFQRRSKPFIKVVQHFQSK 170
Query 129 TVGTITEAGLQTQTADTAQALVAVSVQTSNAGEADPVPRAWRMRITVQRVGDRVKVSDVG 188
+VGTIT A L++++ D AQ LVAVSV+T+ A + PRAWRMRITVQ+VGD KV++V
Sbjct 171 SVGTITAAALESESDDAAQVLVAVSVKTTTAAAPEQRPRAWRMRITVQQVGDEAKVANVE 230
Query 189 FVP 191
FVP
Sbjct 231 FVP 233
>gi|240171812|ref|ZP_04750471.1| hypothetical protein MkanA1_21030 [Mycobacterium kansasii ATCC
12478]
Length=175
Score = 157 bits (396), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 88/171 (52%), Positives = 120/171 (71%), Gaps = 5/171 (2%)
Query 26 APAKPS-MSAPRRMLLFGLVVVVALAVLLCCWGFRVQRARHAQDQRGH----FLQAARQC 80
A A PS + R +L LVVV+ LA L+ G+RV +++ + Q FLQA RQ
Sbjct 5 AEAPPSGLGTARPAVLAMLVVVLGLAGLVAFLGYRVHQSQQTEQQTEQQSRLFLQAGRQG 64
Query 81 ALNLTTIDWRNAEADVRRILDGATGEFYNDFAQRSQPFVEVLRHAKASTVGTITEAGLQT 140
ALNLTTID+R A ADV+RILDGA G+ Y++FA+RSQP+++V+ ++ +VGT+TEA L++
Sbjct 65 ALNLTTIDFRQANADVQRILDGAMGQLYDNFAKRSQPYIDVVVRTQSKSVGTVTEAALES 124
Query 141 QTADTAQALVAVSVQTSNAGEADPVPRAWRMRITVQRVGDRVKVSDVGFVP 191
Q+ D AQ LVAV+V+TSN A RAWRMR+ V+RVG + KVS+V FVP
Sbjct 125 QSGDQAQVLVAVTVKTSNIYAAQEESRAWRMRLWVRRVGAQAKVSNVEFVP 175
>gi|126436889|ref|YP_001072580.1| hypothetical protein Mjls_4318 [Mycobacterium sp. JLS]
gi|126236689|gb|ABO00090.1| hypothetical protein Mjls_4318 [Mycobacterium sp. JLS]
Length=216
Score = 155 bits (393), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 73/135 (55%), Positives = 102/135 (76%), Gaps = 0/135 (0%)
Query 56 WGFRVQRARHAQDQRGHFLQAARQCALNLTTIDWRNAEADVRRILDGATGEFYNDFAQRS 115
+G++ R+ +R FL+ RQ A NLTTIDW A+ADV+R+LD ATG FY+DF +R+
Sbjct 81 FGYQAYRSDQDTKERNLFLEVGRQAAQNLTTIDWERADADVQRVLDVATGTFYDDFQKRA 140
Query 116 QPFVEVLRHAKASTVGTITEAGLQTQTADTAQALVAVSVQTSNAGEADPVPRAWRMRITV 175
+PF++V++ AK+ +VGT+ EAGL++ + DTA+ LVAV+V++SNAG + PRAWRMR+TV
Sbjct 141 EPFLQVVKEAKSKSVGTLGEAGLESVSGDTAEVLVAVTVKSSNAGAPEQPPRAWRMRLTV 200
Query 176 QRVGDRVKVSDVGFV 190
QRV D KVS V FV
Sbjct 201 QRVDDGAKVSQVEFV 215
>gi|108801052|ref|YP_641249.1| hypothetical protein Mmcs_4088 [Mycobacterium sp. MCS]
gi|119870194|ref|YP_940146.1| hypothetical protein Mkms_4164 [Mycobacterium sp. KMS]
gi|108771471|gb|ABG10193.1| conserved hypothetical protein [Mycobacterium sp. MCS]
gi|119696283|gb|ABL93356.1| conserved hypothetical protein [Mycobacterium sp. KMS]
Length=213
Score = 155 bits (393), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 73/135 (55%), Positives = 102/135 (76%), Gaps = 0/135 (0%)
Query 56 WGFRVQRARHAQDQRGHFLQAARQCALNLTTIDWRNAEADVRRILDGATGEFYNDFAQRS 115
+G++ R+ +R FL+ RQ A NLTTIDW A+ADV+R+LD ATG FY+DF +R+
Sbjct 78 FGYQAYRSDQDTKERNLFLEVGRQAAQNLTTIDWERADADVQRVLDVATGTFYDDFQKRA 137
Query 116 QPFVEVLRHAKASTVGTITEAGLQTQTADTAQALVAVSVQTSNAGEADPVPRAWRMRITV 175
+PF++V++ AK+ +VGT+ EAGL++ + DTA+ LVAV+V++SNAG + PRAWRMR+TV
Sbjct 138 EPFLQVVKEAKSKSVGTLGEAGLESVSGDTAEVLVAVTVKSSNAGAPEQPPRAWRMRLTV 197
Query 176 QRVGDRVKVSDVGFV 190
QRV D KVS V FV
Sbjct 198 QRVDDGAKVSQVEFV 212
>gi|108798500|ref|YP_638697.1| hypothetical protein Mmcs_1530 [Mycobacterium sp. MCS]
gi|108768919|gb|ABG07641.1| conserved hypothetical protein [Mycobacterium sp. MCS]
Length=182
Score = 155 bits (392), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 77/168 (46%), Positives = 111/168 (67%), Gaps = 0/168 (0%)
Query 24 SPAPAKPSMSAPRRMLLFGLVVVVALAVLLCCWGFRVQRARHAQDQRGHFLQAARQCALN 83
S PA + R + F +V +V L + G+R+ R AQ + F++AARQ A+N
Sbjct 15 SDMPAPQRHNGIRLAVAFSVVAIVGLGGVAGWLGYRIVDDRRAQAELNEFVEAARQGAIN 74
Query 84 LTTIDWRNAEADVRRILDGATGEFYNDFAQRSQPFVEVLRHAKASTVGTITEAGLQTQTA 143
LTTID + +AD++RILD +TG F +DF +RSQ F EV++ A++++ GT+T AGL+++
Sbjct 75 LTTIDHTSVDADIKRILDSSTGTFRDDFEKRSQTFAEVVKQAQSTSEGTVTSAGLESREG 134
Query 144 DTAQALVAVSVQTSNAGEADPVPRAWRMRITVQRVGDRVKVSDVGFVP 191
DTAQ LV +SV SNAG A+ PR+WRMR+ V++ GD KVSDV V
Sbjct 135 DTAQVLVVMSVNMSNAGAAEQSPRSWRMRVGVEQTGDAAKVSDVQLVS 182
>gi|119867600|ref|YP_937552.1| hypothetical protein Mkms_1553 [Mycobacterium sp. KMS]
gi|119693689|gb|ABL90762.1| conserved hypothetical protein [Mycobacterium sp. KMS]
Length=166
Score = 154 bits (388), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 77/166 (47%), Positives = 112/166 (68%), Gaps = 2/166 (1%)
Query 25 PAPAKPSMSAPRRMLLFGLVVVVALAVLLCCWGFRVQRARHAQDQRGHFLQAARQCALNL 84
PAP + + R + F +V +V L + G+R+ R AQ + F++AARQ A+NL
Sbjct 2 PAPQRHN--GIRLAVAFSVVAIVGLGGVAGWLGYRIVDDRRAQAELNEFVEAARQGAINL 59
Query 85 TTIDWRNAEADVRRILDGATGEFYNDFAQRSQPFVEVLRHAKASTVGTITEAGLQTQTAD 144
TTID + +AD++RILD +TG F +DF +RSQ F EV++ A++++ GT+T AGL+++ D
Sbjct 60 TTIDHTSVDADIKRILDSSTGTFRDDFEKRSQTFAEVVKQAQSTSEGTVTSAGLESREGD 119
Query 145 TAQALVAVSVQTSNAGEADPVPRAWRMRITVQRVGDRVKVSDVGFV 190
TAQ LV +SV SNAG A+ PR+WRMR+ V++ GD KVSDV V
Sbjct 120 TAQVLVVMSVNMSNAGAAEQSPRSWRMRVGVEQTGDAAKVSDVQLV 165
>gi|118462830|ref|YP_881286.1| hypothetical protein MAV_2070 [Mycobacterium avium 104]
gi|118164117|gb|ABK65014.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=203
Score = 149 bits (377), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 78/154 (51%), Positives = 108/154 (71%), Gaps = 1/154 (0%)
Query 38 MLLFGLVVVVALAVLLCCWGFRVQRARHAQDQRGHFLQAARQCALNLTTIDWRNAEADVR 97
+L G V+V ALA L G+R + AQ +R F+ ARQ A+NLTTI++ + DV+
Sbjct 51 VLAVGAVMVAALAGLSGWLGYRAYQQHDAQARRNLFVATARQGAVNLTTINYTQVDRDVQ 110
Query 98 RILDGATGEFYNDFAQRSQPFVEVLRHAKASTVGTITEAGLQTQTADTAQALVAVSVQTS 157
RILD ATG F ++F QRS+PF EV++ A++ + GT+T+AGL++Q D+AQ LVAV+V++
Sbjct 111 RILDSATGAFRDEFEQRSKPFAEVVKAAQSKSEGTVTDAGLESQRGDSAQVLVAVAVKSH 170
Query 158 NAGEADPVPRAWRMRITVQRVGDRVKVSDVGFVP 191
AG +P PR WRMRI V+ VGD KVS+V FVP
Sbjct 171 TAGGDEP-PREWRMRIEVRSVGDDAKVSNVVFVP 203
>gi|254774792|ref|ZP_05216308.1| hypothetical protein MaviaA2_08985 [Mycobacterium avium subsp.
avium ATCC 25291]
Length=203
Score = 149 bits (377), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 78/154 (51%), Positives = 108/154 (71%), Gaps = 1/154 (0%)
Query 38 MLLFGLVVVVALAVLLCCWGFRVQRARHAQDQRGHFLQAARQCALNLTTIDWRNAEADVR 97
+L G V+V ALA L G+R + AQ +R F+ ARQ A+NLTTI++ + DV+
Sbjct 51 VLAVGAVMVAALAGLSGWLGYRAYQQHDAQARRNLFVATARQGAVNLTTINYTQVDRDVQ 110
Query 98 RILDGATGEFYNDFAQRSQPFVEVLRHAKASTVGTITEAGLQTQTADTAQALVAVSVQTS 157
RILD ATG F ++F QRS+PF EV++ A++ + GT+T+AGL++Q D+AQ LVAV+V++
Sbjct 111 RILDSATGAFRDEFEQRSKPFAEVVKAAQSKSEGTVTDAGLESQRGDSAQVLVAVAVKSH 170
Query 158 NAGEADPVPRAWRMRITVQRVGDRVKVSDVGFVP 191
AG +P PR WRMRI V+ VGD KVS+V FVP
Sbjct 171 TAGGDEP-PREWRMRIEVRSVGDDAKVSNVVFVP 203
>gi|41408208|ref|NP_961044.1| hypothetical protein MAP2110c [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41396563|gb|AAS04427.1| hypothetical protein MAP_2110c [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|336461653|gb|EGO40516.1| hypothetical protein MAPs_28150 [Mycobacterium avium subsp. paratuberculosis
S397]
Length=203
Score = 147 bits (371), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 77/154 (50%), Positives = 107/154 (70%), Gaps = 1/154 (0%)
Query 38 MLLFGLVVVVALAVLLCCWGFRVQRARHAQDQRGHFLQAARQCALNLTTIDWRNAEADVR 97
+L G V+V ALA L G+R + AQ +R F+ A Q A+NLTTI++ + DV+
Sbjct 51 VLAVGAVMVAALAGLSGWLGYRAYQQHDAQARRNLFVATASQGAVNLTTINYTQVDRDVQ 110
Query 98 RILDGATGEFYNDFAQRSQPFVEVLRHAKASTVGTITEAGLQTQTADTAQALVAVSVQTS 157
RILD ATG F ++F QRS+PF EV++ A++ + GT+T+AGL++Q D+AQ LVAV+V++
Sbjct 111 RILDSATGAFRDEFEQRSKPFAEVVKAAQSKSEGTVTDAGLESQRGDSAQVLVAVAVKSH 170
Query 158 NAGEADPVPRAWRMRITVQRVGDRVKVSDVGFVP 191
AG +P PR WRMRI V+ VGD KVS+V FVP
Sbjct 171 TAGGDEP-PREWRMRIEVRSVGDDAKVSNVVFVP 203
>gi|118472928|ref|YP_884765.1| hypothetical protein MSMEG_0352 [Mycobacterium smegmatis str.
MC2 155]
gi|118174215|gb|ABK75111.1| conserved hypothetical protein [Mycobacterium smegmatis str.
MC2 155]
Length=200
Score = 145 bits (365), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 84/179 (47%), Positives = 120/179 (68%), Gaps = 5/179 (2%)
Query 16 EIAEAAGVSPAPAKPSMSAPRRMLLFGLVV-VVALAVLLCCWGFRV-QRARHAQDQRGH- 72
E E +GV +P+ SA R + LV+ V+ LA++ G+ V Q R QDQR +
Sbjct 22 ETDEKSGVDTDSREPT-SAQVRGVRGALVIGVLLLAIVGGATGWLVWQTQRAEQDQRMNE 80
Query 73 -FLQAARQCALNLTTIDWRNAEADVRRILDGATGEFYNDFAQRSQPFVEVLRHAKASTVG 131
LQA R+ A+NLTT+D+ + D++R+LDG+TG FY++F QR+ F EV+ ++ T G
Sbjct 81 MLLQAGREAAVNLTTMDFEHIREDIQRVLDGSTGTFYDEFEQRAPAFEEVVTKTQSKTEG 140
Query 132 TITEAGLQTQTADTAQALVAVSVQTSNAGEADPVPRAWRMRITVQRVGDRVKVSDVGFV 190
T+TEAG+++ +AD+A+ LVAVSV+TSN + PR WRMRI VQRVGD KV++VGFV
Sbjct 141 TVTEAGIESVSADSARVLVAVSVKTSNIAAPEQRPRLWRMRIDVQRVGDVAKVTNVGFV 199
>gi|342857458|ref|ZP_08714114.1| hypothetical protein MCOL_01240 [Mycobacterium colombiense CECT
3035]
gi|342134791|gb|EGT87957.1| hypothetical protein MCOL_01240 [Mycobacterium colombiense CECT
3035]
Length=223
Score = 144 bits (363), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 74/153 (49%), Positives = 108/153 (71%), Gaps = 1/153 (0%)
Query 39 LLFGLVVVVALAVLLCCWGFRVQRARHAQDQRGHFLQAARQCALNLTTIDWRNAEADVRR 98
L+ ++V LA L G+R + AQ ++ +++ ARQ A+NLTTI++ +ADV+R
Sbjct 72 LVASGLIVATLAGLSGWLGYRAYQKHDAQARQHLYVETARQGAVNLTTINYTRVDADVQR 131
Query 99 ILDGATGEFYNDFAQRSQPFVEVLRHAKASTVGTITEAGLQTQTADTAQALVAVSVQTSN 158
ILD ATG F +DF QRS+PF+EV++ A++ + GT+T+AGL++Q D+AQ LVAV+V++
Sbjct 132 ILDLATGAFRDDFEQRSKPFMEVVKAAQSKSEGTVTDAGLESQRGDSAQVLVAVAVKSRT 191
Query 159 AGEADPVPRAWRMRITVQRVGDRVKVSDVGFVP 191
AG + PR WRMRI V+ VGD KVS+V FVP
Sbjct 192 AG-GEEAPREWRMRIEVRSVGDDAKVSNVVFVP 223
>gi|333989714|ref|YP_004522328.1| Mce associated membrane protein [Mycobacterium sp. JDM601]
gi|333485682|gb|AEF35074.1| Mce associated membrane protein [Mycobacterium sp. JDM601]
Length=167
Score = 138 bits (347), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 73/155 (48%), Positives = 102/155 (66%), Gaps = 0/155 (0%)
Query 36 RRMLLFGLVVVVALAVLLCCWGFRVQRARHAQDQRGHFLQAARQCALNLTTIDWRNAEAD 95
RR L+ GL+ V+ A +L GFR A A QR F+QAAR+ A+NLT++D+++AE D
Sbjct 12 RRALIAGLIGVLMTAGVLGWLGFRADAAHSAVAQREMFMQAARRTAINLTSVDYQDAEGD 71
Query 96 VRRILDGATGEFYNDFAQRSQPFVEVLRHAKASTVGTITEAGLQTQTADTAQALVAVSVQ 155
VRR+LD ATGEFY FA R+ +E + ++ V ++EAGL+ Q+ D AQ LV VSV
Sbjct 72 VRRVLDSATGEFYERFAGRAPLLIETVTRERSLAVSAVSEAGLEWQSDDEAQVLVVVSVA 131
Query 156 TSNAGEADPVPRAWRMRITVQRVGDRVKVSDVGFV 190
+++ G P RMR+TVQRVG + KVSD+ +V
Sbjct 132 STHLGGLRERPHELRMRLTVQRVGKQAKVSDIEYV 166
>gi|120401934|ref|YP_951763.1| hypothetical protein Mvan_0919 [Mycobacterium vanbaalenii PYR-1]
gi|119954752|gb|ABM11757.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1]
Length=200
Score = 136 bits (343), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 79/171 (47%), Positives = 103/171 (61%), Gaps = 1/171 (0%)
Query 21 AGVSPAPAKPSMSAPRRMLLFGLVVVVALAVLLCCWGFRVQRARHAQDQRGHFLQAARQC 80
AG PA+ A R ++FGL+ + A+ V+ F+V A QR L A R
Sbjct 31 AGTVVDPARDERRAVRVGVVFGLMALAAVVVIAGWLKFQVHAADEELQQRAQLLAAGRDG 90
Query 81 ALNLTTIDWRNAEADVRRILDGATGEFYNDFAQRSQPFVEVLRHAKASTVGTITEAGLQT 140
A+ LTTI+ +AEA V +IL+ ATG F DF RSQ F+ +R A++ T GT+ EAGL++
Sbjct 91 AVLLTTINHSDAEAKVEQILESATGVFLEDFRSRSQSFLATVRRAQSDTAGTVVEAGLES 150
Query 141 QTADTAQALVAVSVQTSNAGEADPVPRAWRMRITVQRVGDRVKVSDVGFVP 191
D A LV +SV+TS AG A P PR WRMRI VQ+VG KVSDV F+P
Sbjct 151 SHGDQANVLVVMSVKTSLAGTAAP-PRLWRMRIGVQQVGQSTKVSDVEFLP 200
>gi|118473172|ref|YP_889454.1| hypothetical protein MSMEG_5208 [Mycobacterium smegmatis str.
MC2 155]
gi|118174459|gb|ABK75355.1| conserved hypothetical protein [Mycobacterium smegmatis str.
MC2 155]
Length=192
Score = 124 bits (312), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 56/134 (42%), Positives = 93/134 (70%), Gaps = 0/134 (0%)
Query 57 GFRVQRARHAQDQRGHFLQAARQCALNLTTIDWRNAEADVRRILDGATGEFYNDFAQRSQ 116
G+R ++ + QR FLQA RQ A LT + W A+ADV+R+LD A+G F++DF +R++
Sbjct 58 GYRAYQSYGVEQQREAFLQAGRQAATALTNVGWETADADVQRVLDSASGTFFDDFQKRAE 117
Query 117 PFVEVLRHAKASTVGTITEAGLQTQTADTAQALVAVSVQTSNAGEADPVPRAWRMRITVQ 176
++EV++ ++ + GTIT + L++ +TA+ LV+V+V+++NAG + P+ WRMR+TV+
Sbjct 118 SYLEVVKQVQSKSEGTITSSALESVDDNTAKVLVSVTVKSTNAGVPEQAPQFWRMRLTVE 177
Query 177 RVGDRVKVSDVGFV 190
+ KVSDV F+
Sbjct 178 ENAGQAKVSDVEFI 191
>gi|226361011|ref|YP_002778789.1| hypothetical protein ROP_15970 [Rhodococcus opacus B4]
gi|226239496|dbj|BAH49844.1| hypothetical membrane protein [Rhodococcus opacus B4]
Length=189
Score = 116 bits (291), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/183 (36%), Positives = 106/183 (58%), Gaps = 7/183 (3%)
Query 10 EDDAVSEIAEAAGVSPAPAKPSMSAPRRMLLFGLVVVVALAVLLCC--WGFRVQRARHAQ 67
E + + E+A +P P P+++A ++ V+ALA L +G+ ++A
Sbjct 11 ERNPMVEVAPDEDAAPEPRTPAVTAG-----VAILSVLALAFLAVSGYFGYTHRQAEQEA 65
Query 68 DQRGHFLQAARQCALNLTTIDWRNAEADVRRILDGATGEFYNDFAQRSQPFVEVLRHAKA 127
QR + AARQ +NLTT+D+ A+ DV+++LDG+ GEF ++F RS+ + V++ A+
Sbjct 66 QQRSEIVDAARQGVVNLTTMDFERADEDVQKVLDGSAGEFRDEFEARSKDLIAVMQEARV 125
Query 128 STVGTITEAGLQTQTADTAQALVAVSVQTSNAGEADPVPRAWRMRITVQRVGDRVKVSDV 187
+VG + +A ++ Q D+A LVAV+ + SNAG A PR RMR+T+Q K+
Sbjct 126 KSVGEVRQAAIERQDGDSADVLVAVAQKVSNAGGAAEEPRGQRMRVTMQLEDGTYKIVKA 185
Query 188 GFV 190
GFV
Sbjct 186 GFV 188
>gi|111018911|ref|YP_701883.1| hypothetical protein RHA1_ro01914 [Rhodococcus jostii RHA1]
gi|110818441|gb|ABG93725.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length=175
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 56/135 (42%), Positives = 85/135 (63%), Gaps = 0/135 (0%)
Query 56 WGFRVQRARHAQDQRGHFLQAARQCALNLTTIDWRNAEADVRRILDGATGEFYNDFAQRS 115
+G+ ++A QR L+AARQ +NLTT+D+ A+ DV+++LDG+TGEF ++F RS
Sbjct 40 FGYTHRQAEQEAQQRSEILEAARQGVVNLTTMDYERADEDVQKVLDGSTGEFRDEFEARS 99
Query 116 QPFVEVLRHAKASTVGTITEAGLQTQTADTAQALVAVSVQTSNAGEADPVPRAWRMRITV 175
+ + V++ AK + G + +A ++TQ D A LVAV+ + SNAG A PR RMR+T+
Sbjct 100 KDLIAVMQEAKVKSQGEVRQAAIETQNGDAADVLVAVAQKVSNAGGAAEEPRGQRMRVTM 159
Query 176 QRVGDRVKVSDVGFV 190
Q K+ GFV
Sbjct 160 QLEDGTYKIVKAGFV 174
>gi|254818319|ref|ZP_05223320.1| hypothetical protein MintA_00245 [Mycobacterium intracellulare
ATCC 13950]
Length=292
Score = 114 bits (284), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 65/194 (34%), Positives = 110/194 (57%), Gaps = 14/194 (7%)
Query 11 DDAVSEIAEAAGVSPAPAKPSMSAPR-----RMLLFGLVVVVALAVLLCCW----GFRVQ 61
D+A +E E + +P A+P R RM + VA+ +L+C + G+ +
Sbjct 100 DEAETEKEEVSDETPEDAEPETEPARSRRRLRMPPLSVTWKVAVILLICAFVAASGYMMW 159
Query 62 RARHAQDQRG----HFLQAARQCALNLTTIDWRNAEADVRRILDGATGEFYNDFAQRSQP 117
RH ++R +F+ ARQ +NLT++D A+ DV+R++D +TG+F++DF R++
Sbjct 160 N-RHEVNERSQRIANFVAGARQGVVNLTSMDCNKAKEDVQRVIDSSTGQFHDDFQARAKD 218
Query 118 FVEVLRHAKASTVGTITEAGLQTQTADTAQALVAVSVQTSNAGEADPVPRAWRMRITVQR 177
F V+ +K T GT+ A +Q+ D A LVA + + +NA A PR WR+++TV+
Sbjct 219 FTTVVEQSKVVTKGTVNAAAVQSINGDFALVLVAATSRITNAAGAKDEPRNWRLKVTVKN 278
Query 178 VGDRVKVSDVGFVP 191
G + K+S+V F+P
Sbjct 279 DGGQYKMSNVEFIP 292
>gi|333992917|ref|YP_004525531.1| hypothetical protein JDM601_4277 [Mycobacterium sp. JDM601]
gi|333488885|gb|AEF38277.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=228
Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/153 (41%), Positives = 90/153 (59%), Gaps = 3/153 (1%)
Query 42 GLVVVVALAVLLCCWGFRVQRARHAQ-DQR--GHFLQAARQCALNLTTIDWRNAEADVRR 98
+ VVV LL VQ+ R AQ DQR F+ ARQ + L +ID+ +AE V+R
Sbjct 76 AVAVVVCSCALLVLSALMVQQHRRAQADQRHRAEFVAVARQVVVTLMSIDYNDAEGSVQR 135
Query 99 ILDGATGEFYNDFAQRSQPFVEVLRHAKASTVGTITEAGLQTQTADTAQALVAVSVQTSN 158
I++ +TG F +F + FV+V + AK +T T+ A +++ T D+A LVA S SN
Sbjct 136 IVNNSTGPFRTEFQGAADDFVKVSKDAKVTTKATVNAAAVESMTPDSAVVLVAASSTVSN 195
Query 159 AGEADPVPRAWRMRITVQRVGDRVKVSDVGFVP 191
A A+ PR WR+ + +QR GD++K+S V FVP
Sbjct 196 AAGAEDAPRRWRLTVDLQREGDQIKMSKVEFVP 228
>gi|342860424|ref|ZP_08717075.1| hypothetical protein MCOL_16156 [Mycobacterium colombiense CECT
3035]
gi|342132079|gb|EGT85320.1| hypothetical protein MCOL_16156 [Mycobacterium colombiense CECT
3035]
Length=291
Score = 108 bits (270), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 53/151 (36%), Positives = 91/151 (61%), Gaps = 7/151 (4%)
Query 48 ALAVLLCCW----GFRVQRARHAQDQRGH---FLQAARQCALNLTTIDWRNAEADVRRIL 100
A+ VL+C + G+ + +++ H F+ ARQ +NLT++D+ A+ DV+R++
Sbjct 141 AVIVLICAFVAASGYMMWNRHQVNERKQHAANFIAGARQGVVNLTSMDFNKAKEDVQRVI 200
Query 101 DGATGEFYNDFAQRSQPFVEVLRHAKASTVGTITEAGLQTQTADTAQALVAVSVQTSNAG 160
D +TG+F++DF R++ F V+ +K T GT+ A +Q+ D A LVA + +NA
Sbjct 201 DSSTGQFHDDFQARAKDFTTVVEQSKVVTQGTVNAAAVQSINGDAALVLVAATSHITNAA 260
Query 161 EADPVPRAWRMRITVQRVGDRVKVSDVGFVP 191
A PR WR+++TV+ G + K+S+V F+P
Sbjct 261 GAKDEPRNWRLKVTVKNDGGQYKMSNVEFIP 291
>gi|333918563|ref|YP_004492144.1| hypothetical protein AS9A_0892 [Amycolicicoccus subflavus DQS3-9A1]
gi|333480784|gb|AEF39344.1| hypothetical protein AS9A_0892 [Amycolicicoccus subflavus DQS3-9A1]
Length=208
Score = 107 bits (268), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 70/176 (40%), Positives = 95/176 (54%), Gaps = 4/176 (2%)
Query 17 IAEAAGVSPAPAKPSMSAPRRMLLFGLVVVVALAVLLCCWGFRVQRARHAQD-QRGHFLQ 75
+ E A V AP P A L LVV+V L F++ RA A+D QR +LQ
Sbjct 36 MTERAEVQQAP--PKSRARTITLAVALVVIVGLGAAAGYLFFQL-RAADARDAQRQDYLQ 92
Query 76 AARQCALNLTTIDWRNAEADVRRILDGATGEFYNDFAQRSQPFVEVLRHAKASTVGTITE 135
AARQ LNLT+I A D+ RIL ATGEF +F R PFV V+ A +T G I E
Sbjct 93 AARQTVLNLTSITPETARDDIDRILATATGEFEREFDGRIDPFVSVVVEANVATEGEIIE 152
Query 136 AGLQTQTADTAQALVAVSVQTSNAGEADPVPRAWRMRITVQRVGDRVKVSDVGFVP 191
AGL+++T L+A +N + +P PR +R+R+++ +K S+V FVP
Sbjct 153 AGLESETDSGGTVLLAARTYVTNVAQTEPQPRDFRLRVSIVEEDGVMKTSNVEFVP 208
>gi|108800620|ref|YP_640817.1| hypothetical protein Mmcs_3654 [Mycobacterium sp. MCS]
gi|119869759|ref|YP_939711.1| hypothetical protein Mkms_3727 [Mycobacterium sp. KMS]
gi|108771039|gb|ABG09761.1| conserved hypothetical protein [Mycobacterium sp. MCS]
gi|119695848|gb|ABL92921.1| conserved hypothetical protein [Mycobacterium sp. KMS]
Length=289
Score = 107 bits (267), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 56/155 (37%), Positives = 93/155 (60%), Gaps = 8/155 (5%)
Query 45 VVVALAVLLCC-----WGFRVQRARHA---QDQRGHFLQAARQCALNLTTIDWRNAEADV 96
+ V +AVL+ C G+ + R A ++QR + AARQ + L ++D+ A+ DV
Sbjct 135 LAVTIAVLVICASLAASGYMLWHHRQAVAEREQRAEYAAAARQGVVTLMSLDFNKAQEDV 194
Query 97 RRILDGATGEFYNDFAQRSQPFVEVLRHAKASTVGTITEAGLQTQTADTAQALVAVSVQT 156
+RI+D +TG+F DF Q+++ F EV + +K T + A +++ T D+A LV+ + +
Sbjct 195 KRIIDNSTGQFKEDFEQQAEAFAEVAQDSKVVTEVNVNLAAVKSMTDDSASVLVSATSRV 254
Query 157 SNAGEADPVPRAWRMRITVQRVGDRVKVSDVGFVP 191
+NA A PRAWR+ + + R GD++K+S V FVP
Sbjct 255 TNAAGAKQEPRAWRLAVELSREGDQIKMSKVEFVP 289
>gi|41406849|ref|NP_959685.1| hypothetical protein MAP0751c [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41395199|gb|AAS03068.1| hypothetical protein MAP_0751c [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|336461113|gb|EGO39991.1| hypothetical protein MAPs_33170 [Mycobacterium avium subsp. paratuberculosis
S397]
Length=295
Score = 105 bits (263), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/166 (35%), Positives = 92/166 (56%), Gaps = 10/166 (6%)
Query 30 PSMSAPRRMLLFGLVVVVALAVLLCCWGFRVQRARHAQDQRG----HFLQAARQCALNLT 85
PS S + + L+ A W RH +R +FL AARQ +N+T
Sbjct 136 PSWSVAWKAAVIALICAFVAASGYMMW------ERHQTSERNQRIANFLAAARQGVVNMT 189
Query 86 TIDWRNAEADVRRILDGATGEFYNDFAQRSQPFVEVLRHAKASTVGTITEAGLQTQTADT 145
++D+ A+ DV+R++D +TG+F +DF QR++ F V+ +K T GT+ A +Q+ ++
Sbjct 190 SLDFNKAKEDVQRVIDSSTGQFRDDFQQRAKDFTTVVEQSKVVTQGTVNAAAVQSIDGNS 249
Query 146 AQALVAVSVQTSNAGEADPVPRAWRMRITVQRVGDRVKVSDVGFVP 191
A LVA + + +NA A PR WR+++TV G + K+S + FVP
Sbjct 250 ALVLVAATSRITNAAGAKDEPRNWRLKVTVTDEGGQYKMSKLEFVP 295
>gi|118464140|ref|YP_880199.1| hypothetical protein MAV_0938 [Mycobacterium avium 104]
gi|254773828|ref|ZP_05215344.1| hypothetical protein MaviaA2_04007 [Mycobacterium avium subsp.
avium ATCC 25291]
gi|118165427|gb|ABK66324.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=296
Score = 104 bits (259), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 55/152 (37%), Positives = 92/152 (61%), Gaps = 9/152 (5%)
Query 48 ALAVLLCCW----GFRVQRARHAQDQRG----HFLQAARQCALNLTTIDWRNAEADVRRI 99
A+ L+C + G+ + RH +R +FL AARQ +N+T++D+ A+ DV+R+
Sbjct 146 AVIALICAFVAASGYMMWE-RHQTSERNQRIANFLAAARQGVVNMTSLDFNKAKEDVQRV 204
Query 100 LDGATGEFYNDFAQRSQPFVEVLRHAKASTVGTITEAGLQTQTADTAQALVAVSVQTSNA 159
+D +TG+F +DF QR++ F V+ +K T GT+ A +Q+ ++A LVA + + +NA
Sbjct 205 IDSSTGQFRDDFQQRAKDFTTVVEQSKVVTQGTVNAAAVQSIDGNSALVLVAATSRITNA 264
Query 160 GEADPVPRAWRMRITVQRVGDRVKVSDVGFVP 191
A PR WR+++TV G + K+S + FVP
Sbjct 265 AGAKDEPRNWRLKVTVTDEGGQYKMSKLEFVP 296
>gi|111021676|ref|YP_704648.1| hypothetical protein RHA1_ro04704 [Rhodococcus jostii RHA1]
gi|110821206|gb|ABG96490.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length=247
Score = 104 bits (259), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 57/133 (43%), Positives = 80/133 (61%), Gaps = 2/133 (1%)
Query 61 QRARHAQDQRGHFLQAARQCALNLTTIDWRNAEADVRRILDGATGEFYNDFAQRSQPFVE 120
Q AR D+R F+ ARQ LNLTTI A+ DV RI+ GA+G+F +F R PFV
Sbjct 115 QSARERDDRRQAFVDTARQTVLNLTTIHPETAKEDVDRIIAGASGQFLEEFQGREDPFVG 174
Query 121 VLRHAKASTVGTITEAGLQ--TQTADTAQALVAVSVQTSNAGEADPVPRAWRMRITVQRV 178
V+R A +T G + EAG++ ++T+ +A LVA S+ + +P PR +RMR+TV V
Sbjct 175 VVRDANVTTEGQVVEAGVENGSETSISANVLVAARTMVSSKEQPEPSPRDFRMRVTVSDV 234
Query 179 GDRVKVSDVGFVP 191
++ S V FVP
Sbjct 235 DGKLTASKVEFVP 247
>gi|226364213|ref|YP_002781995.1| hypothetical protein ROP_48030 [Rhodococcus opacus B4]
gi|226242702|dbj|BAH53050.1| hypothetical membrane protein [Rhodococcus opacus B4]
Length=247
Score = 103 bits (258), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/177 (39%), Positives = 103/177 (59%), Gaps = 5/177 (2%)
Query 20 AAGVSPAPAKPSMSAPRRMLL-FGLVVVVALAVLLCCWGFRV-QR-ARHAQDQRGHFLQA 76
A +PAP+ P P + LL +G+ VV +A+++ + QR AR D+R F+
Sbjct 71 APSEAPAPSAPKTRRPLKSLLAWGITAVVIVALVVAAVVLLLDQRSARERDDRRQAFVDT 130
Query 77 ARQCALNLTTIDWRNAEADVRRILDGATGEFYNDFAQRSQPFVEVLRHAKASTVGTITEA 136
ARQ LNLTTI A+ DV RI+ GA+G+F +F R PFV V++ A +T G + EA
Sbjct 131 ARQTVLNLTTIHPETAKDDVARIVAGASGQFLEEFQGREDPFVGVVQDANVTTEGEVVEA 190
Query 137 GLQ--TQTADTAQALVAVSVQTSNAGEADPVPRAWRMRITVQRVGDRVKVSDVGFVP 191
G++ T+T+ +A LVA S+ + +P PR +RMR+T+ V ++ S V FVP
Sbjct 191 GIENGTETSISANVLVAARTMVSSKEQPEPSPRDFRMRVTISDVDGKLTASKVEFVP 247
>gi|126436244|ref|YP_001071935.1| hypothetical protein Mjls_3667 [Mycobacterium sp. JLS]
gi|126236044|gb|ABN99444.1| conserved hypothetical protein [Mycobacterium sp. JLS]
Length=299
Score = 103 bits (257), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/155 (35%), Positives = 92/155 (60%), Gaps = 8/155 (5%)
Query 45 VVVALAVLLCC-----WGFRVQRARHA---QDQRGHFLQAARQCALNLTTIDWRNAEADV 96
+ V +AVL+ C G+ + R A ++Q + AARQ + L ++D+ A+ DV
Sbjct 145 LAVTIAVLVICASLAASGYMLWHHRQAVAEREQTAEYAAAARQGVVTLMSLDFNKAQEDV 204
Query 97 RRILDGATGEFYNDFAQRSQPFVEVLRHAKASTVGTITEAGLQTQTADTAQALVAVSVQT 156
+RI+D +TG+F DF Q+++ F EV + +K T + A +++ + D+A LV+ + +
Sbjct 205 KRIIDNSTGQFKEDFEQQAEAFAEVAQDSKVVTEVNVNLAAVKSMSDDSATVLVSATSRV 264
Query 157 SNAGEADPVPRAWRMRITVQRVGDRVKVSDVGFVP 191
+NA A PRAWR+ + + R GD++K+S V FVP
Sbjct 265 TNAAGAKQEPRAWRLAVELSREGDQIKMSKVEFVP 299
Lambda K H
0.321 0.131 0.382
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 189364005308
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40