BLASTP 2.2.25+


Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           15,229,318 sequences; 5,219,829,388 total letters



Query= Rv1973

Length=160
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|15609110|ref|NP_216489.1|  MCE associated membrane protein [My...   316    9e-85
gi|289762128|ref|ZP_06521506.1|  MCE associated membrane protein ...   293    7e-78
gi|254820128|ref|ZP_05225129.1|  hypothetical protein MintA_09386...   220    7e-56
gi|126436735|ref|YP_001072426.1|  hypothetical protein Mjls_4163 ...   208    2e-52
gi|296171129|ref|ZP_06852581.1|  twin-arginine translocation path...   199    9e-50
gi|342857621|ref|ZP_08714277.1|  hypothetical protein MCOL_02055 ...   197    4e-49
gi|183982893|ref|YP_001851184.1|  Mce associated membrane protein...   196    8e-49
gi|118618287|ref|YP_906619.1|  Mce associated membrane protein [M...   194    5e-48
gi|315443160|ref|YP_004076039.1|  hypothetical protein Mspyr1_153...   192    1e-47
gi|254774793|ref|ZP_05216309.1|  hypothetical protein MaviaA2_089...   189    1e-46
gi|118463090|ref|YP_881287.1|  hypothetical protein MAV_2071 [Myc...   188    2e-46
gi|118462794|ref|YP_881731.1|  hypothetical protein MAV_2539 [Myc...   185    2e-45
gi|118462375|ref|YP_881189.1|  hypothetical protein MAV_1970 [Myc...   182    1e-44
gi|254819945|ref|ZP_05224946.1|  hypothetical protein MintA_08471...   182    2e-44
gi|118619121|ref|YP_907453.1|  hypothetical protein MUL_3911 [Myc...   177    6e-43
gi|183984016|ref|YP_001852307.1|  hypothetical protein MMAR_4045 ...   177    6e-43
gi|342857457|ref|ZP_08714113.1|  hypothetical protein MCOL_01235 ...   171    4e-41
gi|108798501|ref|YP_638698.1|  hypothetical protein Mmcs_1531 [My...   167    6e-40
gi|108801051|ref|YP_641248.1|  hypothetical protein Mmcs_4087 [My...   166    1e-39
gi|240171813|ref|ZP_04750472.1|  hypothetical protein MkanA1_2103...   164    3e-39
gi|145222696|ref|YP_001133374.1|  hypothetical protein Mflv_2108 ...   160    7e-38
gi|118473626|ref|YP_884766.1|  hypothetical protein MSMEG_0353 [M...   159    1e-37
gi|120401933|ref|YP_951762.1|  hypothetical protein Mvan_0918 [My...   157    6e-37
gi|145221244|ref|YP_001131922.1|  hypothetical protein Mflv_0645 ...   147    4e-34
gi|108798630|ref|YP_638827.1|  hypothetical protein Mmcs_1661 [My...   147    4e-34
gi|120405549|ref|YP_955378.1|  hypothetical protein Mvan_4597 [My...   144    3e-33
gi|118473894|ref|YP_889453.1|  hypothetical protein MSMEG_5207 [M...   142    1e-32
gi|333989715|ref|YP_004522329.1|  Mce associated membrane protein...   129    2e-28
gi|111018910|ref|YP_701882.1|  hypothetical protein RHA1_ro01913 ...   114    6e-24
gi|41408207|ref|NP_961043.1|  hypothetical protein MAP2109c [Myco...   113    7e-24
gi|8920264|emb|CAB96436.1|  hypothetical protein [Mycobacterium a...   113    8e-24
gi|336461652|gb|EGO40515.1|  hypothetical protein MAPs_28130 [Myc...   111    3e-23
gi|226361010|ref|YP_002778788.1|  hypothetical protein ROP_15960 ...   110    7e-23
gi|118465083|ref|YP_880198.1|  hypothetical protein MAV_0937 [Myc...   109    2e-22
gi|41406848|ref|NP_959684.1|  hypothetical protein MAP0750c [Myco...   109    2e-22
gi|240171445|ref|ZP_04750104.1|  hypothetical protein MkanA1_1918...   108    3e-22
gi|118471039|ref|YP_887185.1|  hypothetical protein MSMEG_2865 [M...   107    7e-22
gi|31792558|ref|NP_855051.1|  hypothetical protein Mb1397c [Mycob...   105    2e-21
gi|15608502|ref|NP_215878.1|  hypothetical protein Rv1362c [Mycob...   105    2e-21
gi|254818318|ref|ZP_05223319.1|  hypothetical protein MintA_00240...   105    2e-21
gi|315443571|ref|YP_004076450.1|  hypothetical protein Mspyr1_195...   105    2e-21
gi|145223114|ref|YP_001133792.1|  hypothetical protein Mflv_2527 ...   105    2e-21
gi|296169605|ref|ZP_06851225.1|  twin-arginine translocation path...   104    4e-21
gi|118468347|ref|YP_889027.1|  hypothetical protein MSMEG_4770 [M...   104    4e-21
gi|183984654|ref|YP_001852945.1|  hypothetical protein MMAR_4686 ...   103    8e-21
gi|226361927|ref|YP_002779705.1|  hypothetical protein ROP_25130 ...   102    1e-20
gi|108800619|ref|YP_640816.1|  twin-arginine translocation pathwa...   102    2e-20
gi|342861409|ref|ZP_08718057.1|  hypothetical protein MCOL_21096 ...   102    2e-20
gi|118619079|ref|YP_907411.1|  hypothetical protein MUL_3859 [Myc...   100    7e-20
gi|126436243|ref|YP_001071934.1|  twin-arginine translocation pat...   100    8e-20


>gi|15609110|ref|NP_216489.1| MCE associated membrane protein [Mycobacterium tuberculosis H37Rv]
 gi|15841448|ref|NP_336485.1| hypothetical protein MT2024.1 [Mycobacterium tuberculosis CDC1551]
 gi|148661782|ref|YP_001283305.1| putative Mce associated membrane protein [Mycobacterium tuberculosis 
H37Ra]
 65 more sequence titles
 
gi|148823187|ref|YP_001287941.1| MCE associated membrane protein [Mycobacterium tuberculosis F11]
 gi|167970505|ref|ZP_02552782.1| MCE associated membrane protein [Mycobacterium tuberculosis H37Ra]
 gi|253798979|ref|YP_003031980.1| hypothetical protein TBMG_02017 [Mycobacterium tuberculosis KZN 
1435]
 gi|254232143|ref|ZP_04925470.1| hypothetical protein TBCG_01921 [Mycobacterium tuberculosis C]
 gi|254364790|ref|ZP_04980836.1| conserved MCE associated membrane protein [Mycobacterium tuberculosis 
str. Haarlem]
 gi|254550994|ref|ZP_05141441.1| hypothetical protein Mtube_11116 [Mycobacterium tuberculosis 
'98-R604 INH-RIF-EM']
 gi|289443457|ref|ZP_06433201.1| MCE-associated membrane protein [Mycobacterium tuberculosis T46]
 gi|289447590|ref|ZP_06437334.1| MCE-associated membrane protein [Mycobacterium tuberculosis CPHL_A]
 gi|289554250|ref|ZP_06443460.1| MCE-associated membrane protein [Mycobacterium tuberculosis KZN 
605]
 gi|289570063|ref|ZP_06450290.1| MCE-associated membrane protein [Mycobacterium tuberculosis T17]
 gi|289746088|ref|ZP_06505466.1| MCE associated membrane protein [Mycobacterium tuberculosis 02_1987]
 gi|289754070|ref|ZP_06513448.1| MCE associated membrane protein [Mycobacterium tuberculosis EAS054]
 gi|289758083|ref|ZP_06517461.1| MCE associated membrane protein [Mycobacterium tuberculosis T85]
 gi|294996895|ref|ZP_06802586.1| hypothetical protein Mtub2_20913 [Mycobacterium tuberculosis 
210]
 gi|297634542|ref|ZP_06952322.1| hypothetical protein MtubK4_10486 [Mycobacterium tuberculosis 
KZN 4207]
 gi|297731530|ref|ZP_06960648.1| hypothetical protein MtubKR_10591 [Mycobacterium tuberculosis 
KZN R506]
 gi|298525467|ref|ZP_07012876.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
 gi|306776205|ref|ZP_07414542.1| MCE-associated membrane protein [Mycobacterium tuberculosis SUMu001]
 gi|306779986|ref|ZP_07418323.1| MCE-associated membrane protein [Mycobacterium tuberculosis SUMu002]
 gi|306784736|ref|ZP_07423058.1| MCE-associated membrane protein [Mycobacterium tuberculosis SUMu003]
 gi|306789093|ref|ZP_07427415.1| MCE-associated membrane protein [Mycobacterium tuberculosis SUMu004]
 gi|306793428|ref|ZP_07431730.1| MCE-associated membrane protein [Mycobacterium tuberculosis SUMu005]
 gi|306797811|ref|ZP_07436113.1| MCE-associated membrane protein [Mycobacterium tuberculosis SUMu006]
 gi|306803692|ref|ZP_07440360.1| MCE-associated membrane protein [Mycobacterium tuberculosis SUMu008]
 gi|306808266|ref|ZP_07444934.1| MCE-associated membrane protein [Mycobacterium tuberculosis SUMu007]
 gi|306968089|ref|ZP_07480750.1| MCE-associated membrane protein [Mycobacterium tuberculosis SUMu009]
 gi|306972314|ref|ZP_07484975.1| MCE-associated membrane protein [Mycobacterium tuberculosis SUMu010]
 gi|307080025|ref|ZP_07489195.1| MCE-associated membrane protein [Mycobacterium tuberculosis SUMu011]
 gi|307084599|ref|ZP_07493712.1| MCE-associated membrane protein [Mycobacterium tuberculosis SUMu012]
 gi|313658863|ref|ZP_07815743.1| hypothetical protein MtubKV_10601 [Mycobacterium tuberculosis 
KZN V2475]
 gi|340626982|ref|YP_004745434.1| putative MCE associated membrane protein [Mycobacterium canettii 
CIPT 140010059]
 gi|2950443|emb|CAA17846.1| POSSIBLE CONSERVED MCE ASSOCIATED MEMBRANE PROTEIN [Mycobacterium 
tuberculosis H37Rv]
 gi|13881687|gb|AAK46299.1| hypothetical protein MT2024.1 [Mycobacterium tuberculosis CDC1551]
 gi|124601202|gb|EAY60212.1| hypothetical protein TBCG_01921 [Mycobacterium tuberculosis C]
 gi|134150304|gb|EBA42349.1| conserved MCE associated membrane protein [Mycobacterium tuberculosis 
str. Haarlem]
 gi|148505934|gb|ABQ73743.1| putative conserved Mce associated membrane protein [Mycobacterium 
tuberculosis H37Ra]
 gi|148721714|gb|ABR06339.1| MCE associated membrane protein [Mycobacterium tuberculosis F11]
 gi|253320482|gb|ACT25085.1| MCE-associated membrane protein [Mycobacterium tuberculosis KZN 
1435]
 gi|289416376|gb|EFD13616.1| MCE-associated membrane protein [Mycobacterium tuberculosis T46]
 gi|289420548|gb|EFD17749.1| MCE-associated membrane protein [Mycobacterium tuberculosis CPHL_A]
 gi|289438882|gb|EFD21375.1| MCE-associated membrane protein [Mycobacterium tuberculosis KZN 
605]
 gi|289543817|gb|EFD47465.1| MCE-associated membrane protein [Mycobacterium tuberculosis T17]
 gi|289686616|gb|EFD54104.1| MCE associated membrane protein [Mycobacterium tuberculosis 02_1987]
 gi|289694657|gb|EFD62086.1| MCE associated membrane protein [Mycobacterium tuberculosis EAS054]
 gi|289713647|gb|EFD77659.1| MCE associated membrane protein [Mycobacterium tuberculosis T85]
 gi|298495261|gb|EFI30555.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
 gi|308215317|gb|EFO74716.1| MCE-associated membrane protein [Mycobacterium tuberculosis SUMu001]
 gi|308327090|gb|EFP15941.1| MCE-associated membrane protein [Mycobacterium tuberculosis SUMu002]
 gi|308330469|gb|EFP19320.1| MCE-associated membrane protein [Mycobacterium tuberculosis SUMu003]
 gi|308334303|gb|EFP23154.1| MCE-associated membrane protein [Mycobacterium tuberculosis SUMu004]
 gi|308338105|gb|EFP26956.1| MCE-associated membrane protein [Mycobacterium tuberculosis SUMu005]
 gi|308341797|gb|EFP30648.1| MCE-associated membrane protein [Mycobacterium tuberculosis SUMu006]
 gi|308345283|gb|EFP34134.1| MCE-associated membrane protein [Mycobacterium tuberculosis SUMu007]
 gi|308349587|gb|EFP38438.1| MCE-associated membrane protein [Mycobacterium tuberculosis SUMu008]
 gi|308354214|gb|EFP43065.1| MCE-associated membrane protein [Mycobacterium tuberculosis SUMu009]
 gi|308358192|gb|EFP47043.1| MCE-associated membrane protein [Mycobacterium tuberculosis SUMu010]
 gi|308362124|gb|EFP50975.1| MCE-associated membrane protein [Mycobacterium tuberculosis SUMu011]
 gi|308365778|gb|EFP54629.1| MCE-associated membrane protein [Mycobacterium tuberculosis SUMu012]
 gi|323719460|gb|EGB28587.1| MCE-associated membrane protein [Mycobacterium tuberculosis CDC1551A]
 gi|326903580|gb|EGE50513.1| MCE-associated membrane protein [Mycobacterium tuberculosis W-148]
 gi|328458734|gb|AEB04157.1| MCE-associated membrane protein [Mycobacterium tuberculosis KZN 
4207]
 gi|339294898|gb|AEJ47009.1| MCE associated membrane protein [Mycobacterium tuberculosis CCDC5079]
 gi|339298521|gb|AEJ50631.1| MCE associated membrane protein [Mycobacterium tuberculosis CCDC5180]
 gi|340005172|emb|CCC44321.1| putative conserved MCE associated membrane protein [Mycobacterium 
canettii CIPT 140010059]
 gi|344219795|gb|AEN00426.1| MCE associated membrane protein [Mycobacterium tuberculosis CTRI-2]
Length=160

 Score =  316 bits (809),  Expect = 9e-85, Method: Compositional matrix adjust.
 Identities = 159/160 (99%), Positives = 160/160 (100%), Gaps = 0/160 (0%)

Query  1    VSWSRVIAYGLLPGLALALTCGAGLLKWQDGAVRDAAVARAESVRAATDGTTALLSYRPD  60
            +SWSRVIAYGLLPGLALALTCGAGLLKWQDGAVRDAAVARAESVRAATDGTTALLSYRPD
Sbjct  1    MSWSRVIAYGLLPGLALALTCGAGLLKWQDGAVRDAAVARAESVRAATDGTTALLSYRPD  60

Query  61   TVQHDLESARSRLTGTFLDAYTQLTHDVVIPGAQQKQISAVATVAAAASVSTSADRAVVL  120
            TVQHDLESARSRLTGTFLDAYTQLTHDVVIPGAQQKQISAVATVAAAASVSTSADRAVVL
Sbjct  61   TVQHDLESARSRLTGTFLDAYTQLTHDVVIPGAQQKQISAVATVAAAASVSTSADRAVVL  120

Query  121  LFVNQTITVGKDAPTTAASSVRVTLDNINGRWLISQFEPI  160
            LFVNQTITVGKDAPTTAASSVRVTLDNINGRWLISQFEPI
Sbjct  121  LFVNQTITVGKDAPTTAASSVRVTLDNINGRWLISQFEPI  160


>gi|289762128|ref|ZP_06521506.1| MCE associated membrane protein [Mycobacterium tuberculosis GM 
1503]
 gi|289709634|gb|EFD73650.1| MCE associated membrane protein [Mycobacterium tuberculosis GM 
1503]
Length=150

 Score =  293 bits (749),  Expect = 7e-78, Method: Compositional matrix adjust.
 Identities = 149/150 (99%), Positives = 150/150 (100%), Gaps = 0/150 (0%)

Query  1    VSWSRVIAYGLLPGLALALTCGAGLLKWQDGAVRDAAVARAESVRAATDGTTALLSYRPD  60
            +SWSRVIAYGLLPGLALALTCGAGLLKWQDGAVRDAAVARAESVRAATDGTTALLSYRPD
Sbjct  1    MSWSRVIAYGLLPGLALALTCGAGLLKWQDGAVRDAAVARAESVRAATDGTTALLSYRPD  60

Query  61   TVQHDLESARSRLTGTFLDAYTQLTHDVVIPGAQQKQISAVATVAAAASVSTSADRAVVL  120
            TVQHDLESARSRLTGTFLDAYTQLTHDVVIPGAQQKQISAVATVAAAASVSTSADRAVVL
Sbjct  61   TVQHDLESARSRLTGTFLDAYTQLTHDVVIPGAQQKQISAVATVAAAASVSTSADRAVVL  120

Query  121  LFVNQTITVGKDAPTTAASSVRVTLDNING  150
            LFVNQTITVGKDAPTTAASSVRVTLDNING
Sbjct  121  LFVNQTITVGKDAPTTAASSVRVTLDNING  150


>gi|254820128|ref|ZP_05225129.1| hypothetical protein MintA_09386 [Mycobacterium intracellulare 
ATCC 13950]
Length=220

 Score =  220 bits (560),  Expect = 7e-56, Method: Compositional matrix adjust.
 Identities = 105/160 (66%), Positives = 128/160 (80%), Gaps = 0/160 (0%)

Query  1    VSWSRVIAYGLLPGLALALTCGAGLLKWQDGAVRDAAVARAESVRAATDGTTALLSYRPD  60
            + W+R I Y LLPGLAL+L   AG LKWQ G+ R A +A  ESVR AT+ T ALLSYR D
Sbjct  61   IRWARAIVYALLPGLALSLAVAAGFLKWQGGSARTAQLAATESVRTATESTIALLSYRAD  120

Query  61   TVQHDLESARSRLTGTFLDAYTQLTHDVVIPGAQQKQISAVATVAAAASVSTSADRAVVL  120
            +V+ DLE+ARSRLTG FL+AYT LTHDVVIPGA+QK ISA ATV AAA +  +   AVVL
Sbjct  121  SVEKDLEAARSRLTGKFLNAYTSLTHDVVIPGAKQKHISASATVPAAAPIEATGSHAVVL  180

Query  121  LFVNQTITVGKDAPTTAASSVRVTLDNINGRWLISQFEPI  160
            LFVNQT+T+G+D+PT +ASSVRVTLD ++GRWLI++F+PI
Sbjct  181  LFVNQTVTIGQDSPTNSASSVRVTLDKVDGRWLIAEFDPI  220


>gi|126436735|ref|YP_001072426.1| hypothetical protein Mjls_4163 [Mycobacterium sp. JLS]
 gi|126236535|gb|ABN99935.1| hypothetical protein Mjls_4163 [Mycobacterium sp. JLS]
Length=230

 Score =  208 bits (530),  Expect = 2e-52, Method: Compositional matrix adjust.
 Identities = 99/160 (62%), Positives = 125/160 (79%), Gaps = 0/160 (0%)

Query  1    VSWSRVIAYGLLPGLALALTCGAGLLKWQDGAVRDAAVARAESVRAATDGTTALLSYRPD  60
            + W RV+ +G LPGLAL LT  AG LKWQD A   A VAR E+V+ A D T ALLSY+PD
Sbjct  71   IDWGRVLIFGALPGLALVLTLVAGFLKWQDTAATQAEVARIETVQVAKDATVALLSYKPD  130

Query  61   TVQHDLESARSRLTGTFLDAYTQLTHDVVIPGAQQKQISAVATVAAAASVSTSADRAVVL  120
            T + +L +AR RLTG+F D+Y+QLT++VVIPGA+QKQISA ATV AA SVS  AD AVV+
Sbjct  131  TAERELTAARDRLTGSFRDSYSQLTNEVVIPGAKQKQISATATVPAAGSVSADADHAVVM  190

Query  121  LFVNQTITVGKDAPTTAASSVRVTLDNINGRWLISQFEPI  160
            +FVNQT+ VGKDAPT  AS+VR++++ ++ RWLIS F+PI
Sbjct  191  VFVNQTVIVGKDAPTDTASAVRISMEKVDNRWLISGFDPI  230


>gi|296171129|ref|ZP_06852581.1| twin-arginine translocation pathway signal [Mycobacterium parascrofulaceum 
ATCC BAA-614]
 gi|295894319|gb|EFG74073.1| twin-arginine translocation pathway signal [Mycobacterium parascrofulaceum 
ATCC BAA-614]
Length=167

 Score =  199 bits (507),  Expect = 9e-50, Method: Compositional matrix adjust.
 Identities = 98/160 (62%), Positives = 119/160 (75%), Gaps = 0/160 (0%)

Query  1    VSWSRVIAYGLLPGLALALTCGAGLLKWQDGAVRDAAVARAESVRAATDGTTALLSYRPD  60
            ++WSR +AYGL+PGLAL+L   AG LKWQ  +  DA   R E+ +AA +GT ALL+YRPD
Sbjct  8    INWSRALAYGLIPGLALSLASAAGFLKWQGSSAGDADRGRIEATQAAREGTAALLTYRPD  67

Query  61   TVQHDLESARSRLTGTFLDAYTQLTHDVVIPGAQQKQISAVATVAAAASVSTSADRAVVL  120
            TV+ DL +AR RLTG F DAYT L+ DVVIPG++QK +SAVATV +AASVS   D  V L
Sbjct  68   TVERDLGAARDRLTGRFKDAYTSLSRDVVIPGSRQKSVSAVATVQSAASVSAGPDHGVFL  127

Query  121  LFVNQTITVGKDAPTTAASSVRVTLDNINGRWLISQFEPI  160
            LFVNQT  VG  AP   ASSVRVT+D + GRWLIS F+P+
Sbjct  128  LFVNQTTIVGAAAPAYTASSVRVTMDKVGGRWLISGFDPV  167


>gi|342857621|ref|ZP_08714277.1| hypothetical protein MCOL_02055 [Mycobacterium colombiense CECT 
3035]
 gi|342134954|gb|EGT88120.1| hypothetical protein MCOL_02055 [Mycobacterium colombiense CECT 
3035]
Length=223

 Score =  197 bits (502),  Expect = 4e-49, Method: Compositional matrix adjust.
 Identities = 93/158 (59%), Positives = 117/158 (75%), Gaps = 0/158 (0%)

Query  3    WSRVIAYGLLPGLALALTCGAGLLKWQDGAVRDAAVARAESVRAATDGTTALLSYRPDTV  62
            W R + +G+LPGL + L    G LKW+   + +  +AR ESV+ AT+ T  +LSY PDTV
Sbjct  66   WRRTLVFGVLPGLVMLLAGAVGYLKWEQTNLSETRIARIESVQTATESTIKILSYNPDTV  125

Query  63   QHDLESARSRLTGTFLDAYTQLTHDVVIPGAQQKQISAVATVAAAASVSTSADRAVVLLF  122
             HDL++AR RLTG F DAYTQLTHDVVIPGA+QK+ISAVATV AA SVS +   AVV++F
Sbjct  126  DHDLDAARDRLTGKFRDAYTQLTHDVVIPGAKQKKISAVATVPAATSVSANPSHAVVMVF  185

Query  123  VNQTITVGKDAPTTAASSVRVTLDNINGRWLISQFEPI  160
            VNQTI VG D P++ AS+VRV++D  + RWLIS F PI
Sbjct  186  VNQTIVVGNDPPSSTASTVRVSMDRHDNRWLISDFTPI  223


>gi|183982893|ref|YP_001851184.1| Mce associated membrane protein [Mycobacterium marinum M]
 gi|183176219|gb|ACC41329.1| conserved Mce associated membrane protein [Mycobacterium marinum 
M]
Length=190

 Score =  196 bits (499),  Expect = 8e-49, Method: Compositional matrix adjust.
 Identities = 111/158 (71%), Positives = 128/158 (82%), Gaps = 0/158 (0%)

Query  3    WSRVIAYGLLPGLALALTCGAGLLKWQDGAVRDAAVARAESVRAATDGTTALLSYRPDTV  62
            W   I YGLLP LAL L  G G  KWQD AVRDAA ARAESV+AAT GT ALLSYRPDTV
Sbjct  33   WWPAIGYGLLPALALLLAGGTGFAKWQDCAVRDAAQARAESVQAATAGTIALLSYRPDTV  92

Query  63   QHDLESARSRLTGTFLDAYTQLTHDVVIPGAQQKQISAVATVAAAASVSTSADRAVVLLF  122
            + DL++AR++LTG FL  YT LT DVVIPGA+QK ISAVATV AAASVS + + A+VLLF
Sbjct  93   RSDLDAARAKLTGAFLSDYTSLTRDVVIPGAKQKDISAVATVPAAASVSATGEHAIVLLF  152

Query  123  VNQTITVGKDAPTTAASSVRVTLDNINGRWLISQFEPI  160
            VNQTI V +DAPT+ ASSVRVTLD ++GRWLIS+F+P+
Sbjct  153  VNQTIIVSQDAPTSTASSVRVTLDKVDGRWLISRFDPV  190


>gi|118618287|ref|YP_906619.1| Mce associated membrane protein [Mycobacterium ulcerans Agy99]
 gi|118570397|gb|ABL05148.1| conserved Mce associated membrane protein [Mycobacterium ulcerans 
Agy99]
Length=190

 Score =  194 bits (492),  Expect = 5e-48, Method: Compositional matrix adjust.
 Identities = 98/134 (74%), Positives = 114/134 (86%), Gaps = 0/134 (0%)

Query  27   KWQDGAVRDAAVARAESVRAATDGTTALLSYRPDTVQHDLESARSRLTGTFLDAYTQLTH  86
            KWQD AVRDAA ARAESV+AAT GT ALLSYRPDTV+ DLE+AR++LTG FL  YT LT 
Sbjct  57   KWQDCAVRDAAQARAESVQAATAGTIALLSYRPDTVRSDLEAARAKLTGAFLSDYTSLTR  116

Query  87   DVVIPGAQQKQISAVATVAAAASVSTSADRAVVLLFVNQTITVGKDAPTTAASSVRVTLD  146
            DVVIPGA+QK ISAVATV AAASVS + + A+VLLFVNQTI V +D PT+ ASSVRVTLD
Sbjct  117  DVVIPGAKQKDISAVATVPAAASVSATGEHAIVLLFVNQTIIVSQDPPTSTASSVRVTLD  176

Query  147  NINGRWLISQFEPI  160
             ++GRWLIS+F+P+
Sbjct  177  KVDGRWLISRFDPV  190


>gi|315443160|ref|YP_004076039.1| hypothetical protein Mspyr1_15340 [Mycobacterium sp. Spyr1]
 gi|315261463|gb|ADT98204.1| hypothetical protein Mspyr1_15340 [Mycobacterium sp. Spyr1]
Length=225

 Score =  192 bits (488),  Expect = 1e-47, Method: Compositional matrix adjust.
 Identities = 101/169 (60%), Positives = 126/169 (75%), Gaps = 9/169 (5%)

Query  1    VSWSRVIAYGLLPGLALALTCGAGLLKWQDGAVRDAAVA--------RAE-SVRAATDGT  51
            + WSRV+A+ +LP +AL L  GAG LKW D + RD +++         AE SV+AA DGT
Sbjct  57   IQWSRVVAFIVLPVIALVLAAGAGYLKWLDNSNRDGSMSVGGAGRPSLAETSVQAARDGT  116

Query  52   TALLSYRPDTVQHDLESARSRLTGTFLDAYTQLTHDVVIPGAQQKQISAVATVAAAASVS  111
             ALLSY PDTV+  L +AR  LTG F D+YT LT+DVVIPGA++KQISA+ATV AAASVS
Sbjct  117  IALLSYAPDTVEQQLGAARELLTGEFRDSYTSLTNDVVIPGAKEKQISAIATVPAAASVS  176

Query  112  TSADRAVVLLFVNQTITVGKDAPTTAASSVRVTLDNINGRWLISQFEPI  160
             + + AVVLLFVNQT+T+G DAPT  ASSVRVTL+    RWLIS+F+P+
Sbjct  177  VTGEEAVVLLFVNQTVTMGPDAPTDTASSVRVTLEKDGDRWLISKFDPV  225


>gi|254774793|ref|ZP_05216309.1| hypothetical protein MaviaA2_08990 [Mycobacterium avium subsp. 
avium ATCC 25291]
Length=191

 Score =  189 bits (479),  Expect = 1e-46, Method: Compositional matrix adjust.
 Identities = 92/160 (58%), Positives = 117/160 (74%), Gaps = 0/160 (0%)

Query  1    VSWSRVIAYGLLPGLALALTCGAGLLKWQDGAVRDAAVARAESVRAATDGTTALLSYRPD  60
            ++W RV  YG+LPGLAL L  GAG L+W  G+  D A ARA+SV+AA +   ALLSYR D
Sbjct  32   IAWPRVFGYGILPGLALVLALGAGYLRWSAGSADDLAQARAQSVQAAREDAVALLSYRAD  91

Query  61   TVQHDLESARSRLTGTFLDAYTQLTHDVVIPGAQQKQISAVATVAAAASVSTSADRAVVL  120
            +V  DL +AR RLTG F DAY +LT  VVIPGA++K IS+ A V AAASVS + + AV L
Sbjct  92   SVDKDLAAARDRLTGEFKDAYAELTRQVVIPGAKEKHISSAARVNAAASVSVAENHAVAL  151

Query  121  LFVNQTITVGKDAPTTAASSVRVTLDNINGRWLISQFEPI  160
            +FV+QT+T+G  APT     VR+TLD +NGRWL+S+FEP+
Sbjct  152  VFVDQTVTIGDGAPTDTQPVVRMTLDKVNGRWLVSRFEPV  191


>gi|118463090|ref|YP_881287.1| hypothetical protein MAV_2071 [Mycobacterium avium 104]
 gi|118164377|gb|ABK65274.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=191

 Score =  188 bits (478),  Expect = 2e-46, Method: Compositional matrix adjust.
 Identities = 92/160 (58%), Positives = 117/160 (74%), Gaps = 0/160 (0%)

Query  1    VSWSRVIAYGLLPGLALALTCGAGLLKWQDGAVRDAAVARAESVRAATDGTTALLSYRPD  60
            ++W RV  YG+LPGLAL L  GAG L+W  G+  D A ARA+SV+AA +   ALLSYR D
Sbjct  32   IAWPRVFGYGILPGLALILALGAGYLRWSAGSADDLAQARAQSVQAAREDAVALLSYRAD  91

Query  61   TVQHDLESARSRLTGTFLDAYTQLTHDVVIPGAQQKQISAVATVAAAASVSTSADRAVVL  120
            +V  DL +AR RLTG F DAY +LT  VVIPGA++K IS+ A V AAASVS + + AV L
Sbjct  92   SVDKDLAAARDRLTGEFKDAYAELTRQVVIPGAKEKHISSAARVNAAASVSVAENHAVAL  151

Query  121  LFVNQTITVGKDAPTTAASSVRVTLDNINGRWLISQFEPI  160
            +FV+QT+T+G  APT     VR+TLD +NGRWL+S+FEP+
Sbjct  152  VFVDQTVTIGDGAPTDTQPVVRMTLDKVNGRWLVSRFEPV  191


>gi|118462794|ref|YP_881731.1| hypothetical protein MAV_2539 [Mycobacterium avium 104]
 gi|118164081|gb|ABK64978.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=199

 Score =  185 bits (470),  Expect = 2e-45, Method: Compositional matrix adjust.
 Identities = 91/160 (57%), Positives = 117/160 (74%), Gaps = 0/160 (0%)

Query  1    VSWSRVIAYGLLPGLALALTCGAGLLKWQDGAVRDAAVARAESVRAATDGTTALLSYRPD  60
            + WSR++ +G+LP  AL +    G LKWQ  +   +  A  ESV AA D + A+LSY+PD
Sbjct  40   IGWSRLLVFGVLPISALLIAVATGFLKWQAASNLWSRAAEIESVAAAKDSSVAILSYQPD  99

Query  61   TVQHDLESARSRLTGTFLDAYTQLTHDVVIPGAQQKQISAVATVAAAASVSTSADRAVVL  120
            TV+ DL +AR RLTG F D+YT+L HDVVIPGA++  ISAVATV AAASVS + + AV L
Sbjct  100  TVEKDLGAARDRLTGKFKDSYTELVHDVVIPGAKKDHISAVATVPAAASVSANPNHAVAL  159

Query  121  LFVNQTITVGKDAPTTAASSVRVTLDNINGRWLISQFEPI  160
            ++VNQT+TVG DAPT  AS+VRVT+D I  RWLIS F+P+
Sbjct  160  VYVNQTVTVGNDAPTDTASTVRVTMDKIGNRWLISAFDPV  199


>gi|118462375|ref|YP_881189.1| hypothetical protein MAV_1970 [Mycobacterium avium 104]
 gi|118163662|gb|ABK64559.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=235

 Score =  182 bits (463),  Expect = 1e-44, Method: Compositional matrix adjust.
 Identities = 96/160 (60%), Positives = 118/160 (74%), Gaps = 0/160 (0%)

Query  1    VSWSRVIAYGLLPGLALALTCGAGLLKWQDGAVRDAAVARAESVRAATDGTTALLSYRPD  60
            V WSRV+A+G+LP +AL L   AG  KWQD +VR+  +AR ESV+ A D T A+LSY+PD
Sbjct  76   VDWSRVVAFGVLPAIALLLAAAAGFFKWQDNSVRNTDIARIESVQTAKDSTIAMLSYKPD  135

Query  61   TVQHDLESARSRLTGTFLDAYTQLTHDVVIPGAQQKQISAVATVAAAASVSTSADRAVVL  120
            TV+  L SAR  LTG F D+YT L  DVVIPGA+Q+QISA A++ AAASVS     AVVL
Sbjct  136  TVEQQLRSARDLLTGEFRDSYTSLITDVVIPGAKQQQISAEASIPAAASVSADPREAVVL  195

Query  121  LFVNQTITVGKDAPTTAASSVRVTLDNINGRWLISQFEPI  160
            +FVNQT  +GK APT  AS+VRVTL+    RWLIS+FEP+
Sbjct  196  VFVNQTTIIGKSAPTDTASTVRVTLNKAGDRWLISKFEPV  235


>gi|254819945|ref|ZP_05224946.1| hypothetical protein MintA_08471 [Mycobacterium intracellulare 
ATCC 13950]
Length=233

 Score =  182 bits (461),  Expect = 2e-44, Method: Compositional matrix adjust.
 Identities = 89/160 (56%), Positives = 116/160 (73%), Gaps = 0/160 (0%)

Query  1    VSWSRVIAYGLLPGLALALTCGAGLLKWQDGAVRDAAVARAESVRAATDGTTALLSYRPD  60
            + WSR++ +G+LP  AL +    G LKWQ  +   +  A  ESV AA D + A+LSYRPD
Sbjct  74   IGWSRLLVFGVLPISALLIAVATGFLKWQAASNLLSRAAEIESVAAAKDSSVAILSYRPD  133

Query  61   TVQHDLESARSRLTGTFLDAYTQLTHDVVIPGAQQKQISAVATVAAAASVSTSADRAVVL  120
            TV+ DL +AR RLTG F D+YTQL  DVVIPGA++  ISAVATV AAASVS + + AV L
Sbjct  134  TVEKDLGAARDRLTGKFKDSYTQLVQDVVIPGAKKDHISAVATVPAAASVSANPNHAVAL  193

Query  121  LFVNQTITVGKDAPTTAASSVRVTLDNINGRWLISQFEPI  160
            ++V+QT++VG DAPT  AS+VRVT+D +  RWLIS F+P+
Sbjct  194  VYVDQTVSVGNDAPTDTASTVRVTMDKVGNRWLISAFDPV  233


>gi|118619121|ref|YP_907453.1| hypothetical protein MUL_3911 [Mycobacterium ulcerans Agy99]
 gi|118571231|gb|ABL05982.1| conserved protein [Mycobacterium ulcerans Agy99]
Length=243

 Score =  177 bits (448),  Expect = 6e-43, Method: Compositional matrix adjust.
 Identities = 89/159 (56%), Positives = 120/159 (76%), Gaps = 0/159 (0%)

Query  2    SWSRVIAYGLLPGLALALTCGAGLLKWQDGAVRDAAVARAESVRAATDGTTALLSYRPDT  61
            SW+ V+A+ +LP LAL L   AG+L+WQ   +R A +A  ++++AA +GT A+LSY+P+T
Sbjct  85   SWAAVLAWVVLPSLALLLAITAGVLRWQYDTMRYAQIAGVQALQAAREGTVAMLSYKPET  144

Query  62   VQHDLESARSRLTGTFLDAYTQLTHDVVIPGAQQKQISAVATVAAAASVSTSADRAVVLL  121
            V+ DL +A+  LTGTF D+YTQLT DVVIPGA+Q++ISAVA V AAA+VS     AVVL+
Sbjct  145  VEKDLTAAQDHLTGTFRDSYTQLTKDVVIPGAKQQRISAVARVPAAATVSADWGHAVVLV  204

Query  122  FVNQTITVGKDAPTTAASSVRVTLDNINGRWLISQFEPI  160
            FV+QT  +G D PT  AS+VRV LD +  RWLIS+F+PI
Sbjct  205  FVDQTTVIGDDPPTDMASTVRVKLDKVGDRWLISEFQPI  243


>gi|183984016|ref|YP_001852307.1| hypothetical protein MMAR_4045 [Mycobacterium marinum M]
 gi|183177342|gb|ACC42452.1| conserved protein [Mycobacterium marinum M]
Length=243

 Score =  177 bits (448),  Expect = 6e-43, Method: Compositional matrix adjust.
 Identities = 89/159 (56%), Positives = 120/159 (76%), Gaps = 0/159 (0%)

Query  2    SWSRVIAYGLLPGLALALTCGAGLLKWQDGAVRDAAVARAESVRAATDGTTALLSYRPDT  61
            SW+ V+A+ +LP LAL L   AG+L+WQ   +R A +A  ++++AA +GT A+LSY+P+T
Sbjct  85   SWAAVLAWVVLPSLALLLAITAGVLRWQYDTMRYAQIAGVQALQAAREGTVAMLSYKPET  144

Query  62   VQHDLESARSRLTGTFLDAYTQLTHDVVIPGAQQKQISAVATVAAAASVSTSADRAVVLL  121
            V+ DL +A+  LTGTF D+YTQLT DVVIPGA+Q++ISAVA V AAA+VS     AVVL+
Sbjct  145  VEKDLTAAQDHLTGTFRDSYTQLTKDVVIPGAKQQRISAVARVPAAATVSADWGHAVVLV  204

Query  122  FVNQTITVGKDAPTTAASSVRVTLDNINGRWLISQFEPI  160
            FV+QT  +G D PT  AS+VRV LD +  RWLIS+F+PI
Sbjct  205  FVDQTTVIGDDPPTDMASTVRVKLDKVGDRWLISEFQPI  243


>gi|342857457|ref|ZP_08714113.1| hypothetical protein MCOL_01235 [Mycobacterium colombiense CECT 
3035]
 gi|342134790|gb|EGT87956.1| hypothetical protein MCOL_01235 [Mycobacterium colombiense CECT 
3035]
Length=203

 Score =  171 bits (432),  Expect = 4e-41, Method: Compositional matrix adjust.
 Identities = 91/160 (57%), Positives = 117/160 (74%), Gaps = 0/160 (0%)

Query  1    VSWSRVIAYGLLPGLALALTCGAGLLKWQDGAVRDAAVARAESVRAATDGTTALLSYRPD  60
            + WSRV A+G+LP LAL L  GAG LKW  GA  D A AR+ESV+AA D    LL+Y  +
Sbjct  44   IVWSRVFAHGILPALALVLALGAGYLKWSAGAADDLARARSESVQAARDDAVTLLTYHAE  103

Query  61   TVQHDLESARSRLTGTFLDAYTQLTHDVVIPGAQQKQISAVATVAAAASVSTSADRAVVL  120
            TV  +L +AR RLTG F DAY +LT  VV+PGA++K IS+VA   AAASVS +A+ AV L
Sbjct  104  TVDKELAAARERLTGEFKDAYAELTRQVVVPGAKEKHISSVAKANAAASVSATANHAVAL  163

Query  121  LFVNQTITVGKDAPTTAASSVRVTLDNINGRWLISQFEPI  160
            ++V+QT+T+G DAPT     VRVTLD +NGRWL+S+F+P+
Sbjct  164  VYVDQTVTIGADAPTDTQPVVRVTLDKVNGRWLVSRFDPV  203


>gi|108798501|ref|YP_638698.1| hypothetical protein Mmcs_1531 [Mycobacterium sp. MCS]
 gi|119867601|ref|YP_937553.1| hypothetical protein Mkms_1554 [Mycobacterium sp. KMS]
 gi|108768920|gb|ABG07642.1| hypothetical protein Mmcs_1531 [Mycobacterium sp. MCS]
 gi|119693690|gb|ABL90763.1| conserved hypothetical protein [Mycobacterium sp. KMS]
Length=205

 Score =  167 bits (422),  Expect = 6e-40, Method: Compositional matrix adjust.
 Identities = 81/156 (52%), Positives = 112/156 (72%), Gaps = 0/156 (0%)

Query  5    RVIAYGLLPGLALALTCGAGLLKWQDGAVRDAAVARAESVRAATDGTTALLSYRPDTVQH  64
            R++AY +LP   LA+ CG G LKWQ  ++  +    A+SV AAT+  TA+LSYR D V+ 
Sbjct  50   RIVAYVVLPVAVLAMACGVGFLKWQANSIGTSQATAAQSVSAATEIATAMLSYRADQVEQ  109

Query  65   DLESARSRLTGTFLDAYTQLTHDVVIPGAQQKQISAVATVAAAASVSTSADRAVVLLFVN  124
            DL +A  R+TG F + YT L +DVVIPGA++K++SA ATV AAA VS+SADRA VL++++
Sbjct  110  DLTAASDRMTGEFRNEYTTLINDVVIPGAKEKRVSAEATVPAAALVSSSADRAEVLVYID  169

Query  125  QTITVGKDAPTTAASSVRVTLDNINGRWLISQFEPI  160
            QT TVG D P+   SS RV+L+ +  RWL++ FEP+
Sbjct  170  QTTTVGDDPPSATTSSARVSLEKVGDRWLLAGFEPV  205


>gi|108801051|ref|YP_641248.1| hypothetical protein Mmcs_4087 [Mycobacterium sp. MCS]
 gi|119870193|ref|YP_940145.1| hypothetical protein Mkms_4163 [Mycobacterium sp. KMS]
 gi|126436888|ref|YP_001072579.1| hypothetical protein Mjls_4317 [Mycobacterium sp. JLS]
 gi|108771470|gb|ABG10192.1| hypothetical protein Mmcs_4087 [Mycobacterium sp. MCS]
 gi|119696282|gb|ABL93355.1| conserved hypothetical protein [Mycobacterium sp. KMS]
 gi|126236688|gb|ABO00089.1| conserved hypothetical protein [Mycobacterium sp. JLS]
Length=206

 Score =  166 bits (420),  Expect = 1e-39, Method: Compositional matrix adjust.
 Identities = 82/160 (52%), Positives = 107/160 (67%), Gaps = 0/160 (0%)

Query  1    VSWSRVIAYGLLPGLALALTCGAGLLKWQDGAVRDAAVARAESVRAATDGTTALLSYRPD  60
            + W RV AYG++P LAL L    G L W++     A  AR +SV AA     ++L+Y P 
Sbjct  47   IPWERVFAYGVVPALALVLAVAGGYLFWRNYTADAAEQAREDSVAAARSIAISMLTYEPQ  106

Query  61   TVQHDLESARSRLTGTFLDAYTQLTHDVVIPGAQQKQISAVATVAAAASVSTSADRAVVL  120
            +V+  L +A+ +LTGTF D Y+ L   VV+PGA+++QISAV  V AAASVS   D AVVL
Sbjct  107  SVEQQLGAAKEQLTGTFRDTYSSLIDTVVVPGAKERQISAVTDVPAAASVSAEPDHAVVL  166

Query  121  LFVNQTITVGKDAPTTAASSVRVTLDNINGRWLISQFEPI  160
            LFVNQT+TVG + PT  ASSVRVTLD +   W +S+F+PI
Sbjct  167  LFVNQTVTVGSEPPTNTASSVRVTLDKVGDHWRVSEFQPI  206


>gi|240171813|ref|ZP_04750472.1| hypothetical protein MkanA1_21035 [Mycobacterium kansasii ATCC 
12478]
Length=184

 Score =  164 bits (416),  Expect = 3e-39, Method: Compositional matrix adjust.
 Identities = 99/160 (62%), Positives = 118/160 (74%), Gaps = 1/160 (0%)

Query  1    VSWSRVIAYGLLPGLALALTCGAGLLKWQDGAVRDAAVARAESVRAATDGTTALLSYRPD  60
            + W R++AYG+LPGLALAL   AG LKWQ  +  D+   R E ++AA   T  LLSYRPD
Sbjct  26   MGWPRLLAYGVLPGLALALALLAGFLKWQCSSAPDS-TGRIEVIQAARAATVELLSYRPD  84

Query  61   TVQHDLESARSRLTGTFLDAYTQLTHDVVIPGAQQKQISAVATVAAAASVSTSADRAVVL  120
            T + DL +AR RLTG F D YT LT DVVIPGA++KQISAVATV AAA+VS   +  VVL
Sbjct  85   TAERDLGAARDRLTGRFKDEYTSLTRDVVIPGAKRKQISAVATVPAAAAVSAQPNHGVVL  144

Query  121  LFVNQTITVGKDAPTTAASSVRVTLDNINGRWLISQFEPI  160
            LFVNQT  VG +APT  ASSVRVTLD ++GRWLIS F+P+
Sbjct  145  LFVNQTTIVGTEAPTYTASSVRVTLDKVDGRWLISGFDPV  184


>gi|145222696|ref|YP_001133374.1| hypothetical protein Mflv_2108 [Mycobacterium gilvum PYR-GCK]
 gi|145215182|gb|ABP44586.1| hypothetical protein Mflv_2108 [Mycobacterium gilvum PYR-GCK]
Length=235

 Score =  160 bits (404),  Expect = 7e-38, Method: Compositional matrix adjust.
 Identities = 104/169 (62%), Positives = 126/169 (75%), Gaps = 9/169 (5%)

Query  1    VSWSRVIAYGLLPGLALALTCGAGLLKWQDGAVRDAAVA--------RAE-SVRAATDGT  51
            V WSRV+A+ +LP LAL L  GAG LKW D + RD +++         AE SV+AA D T
Sbjct  67   VEWSRVVAFLVLPALALVLAAGAGYLKWLDDSYRDGSMSVDGNGRPSLAETSVQAARDST  126

Query  52   TALLSYRPDTVQHDLESARSRLTGTFLDAYTQLTHDVVIPGAQQKQISAVATVAAAASVS  111
             ALLSY PDTV+  L +AR  LTG F D+YT LT+DVVIPGA++KQI+A+ATV AAASVS
Sbjct  127  IALLSYAPDTVEQQLGAARELLTGEFRDSYTSLTNDVVIPGAKEKQIAAIATVPAAASVS  186

Query  112  TSADRAVVLLFVNQTITVGKDAPTTAASSVRVTLDNINGRWLISQFEPI  160
             +AD AVVLLFVNQT+TVG DAPT  ASSVRVTL+    RWLIS+F+P+
Sbjct  187  VTADEAVVLLFVNQTVTVGPDAPTDTASSVRVTLEKDGDRWLISKFDPV  235


>gi|118473626|ref|YP_884766.1| hypothetical protein MSMEG_0353 [Mycobacterium smegmatis str. 
MC2 155]
 gi|118174913|gb|ABK75809.1| conserved hypothetical protein [Mycobacterium smegmatis str. 
MC2 155]
Length=181

 Score =  159 bits (403),  Expect = 1e-37, Method: Compositional matrix adjust.
 Identities = 90/156 (58%), Positives = 111/156 (72%), Gaps = 0/156 (0%)

Query  5    RVIAYGLLPGLALALTCGAGLLKWQDGAVRDAAVARAESVRAATDGTTALLSYRPDTVQH  64
            RV+AY ++P L + L   AG L+W+  ++R A  A   +V AATD T  +LSY+PDTVQ 
Sbjct  26   RVLAYVVIPLLIVGLAACAGYLQWRSSSMRAAQAANVSAVPAATDSTIKMLSYKPDTVQK  85

Query  65   DLESARSRLTGTFLDAYTQLTHDVVIPGAQQKQISAVATVAAAASVSTSADRAVVLLFVN  124
            DLE A   LTG F D Y  L HDVVIPGAQ+KQISAVATV AAA VS + +RAVV++FVN
Sbjct  86   DLELAAEGLTGPFRDDYNSLIHDVVIPGAQEKQISAVATVPAAAVVSATGNRAVVMVFVN  145

Query  125  QTITVGKDAPTTAASSVRVTLDNINGRWLISQFEPI  160
            QT  VG D PT+ AS+VRVT+D +  RWL+S F PI
Sbjct  146  QTTIVGADPPTSTASTVRVTMDKVGERWLVSDFTPI  181


>gi|120401933|ref|YP_951762.1| hypothetical protein Mvan_0918 [Mycobacterium vanbaalenii PYR-1]
 gi|119954751|gb|ABM11756.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1]
Length=185

 Score =  157 bits (396),  Expect = 6e-37, Method: Compositional matrix adjust.
 Identities = 85/154 (56%), Positives = 102/154 (67%), Gaps = 0/154 (0%)

Query  6    VIAYGLLPGLALALTCGAGLLKWQDGAVRDAAVARAESVRAATDGTTALLSYRPDTVQHD  65
            ++A+  +P   L    GA LL+WQ    R A  A   +V AAT G  ALLSY PDTV  +
Sbjct  29   IVAFSAIPACVLIFALGAALLRWQVAESRSALAASTAAVEAATVGAVALLSYEPDTVDRE  88

Query  66   LESARSRLTGTFLDAYTQLTHDVVIPGAQQKQISAVATVAAAASVSTSADRAVVLLFVNQ  125
            L + R RLTG F DA+T LT DVVIPGA+QKQIS+  TV AA+SVS +   A VLLFVNQ
Sbjct  89   LVAVRDRLTGDFRDAFTALTDDVVIPGAKQKQISSAVTVTAASSVSATESHAEVLLFVNQ  148

Query  126  TITVGKDAPTTAASSVRVTLDNINGRWLISQFEP  159
            T  +G D PT  ASSVRV+LD + GRWLI+ F P
Sbjct  149  TTVMGSDPPTQTASSVRVSLDYVEGRWLIADFAP  182


>gi|145221244|ref|YP_001131922.1| hypothetical protein Mflv_0645 [Mycobacterium gilvum PYR-GCK]
 gi|145213730|gb|ABP43134.1| conserved hypothetical protein [Mycobacterium gilvum PYR-GCK]
Length=219

 Score =  147 bits (372),  Expect = 4e-34, Method: Compositional matrix adjust.
 Identities = 86/158 (55%), Positives = 113/158 (72%), Gaps = 0/158 (0%)

Query  2    SWSRVIAYGLLPGLALALTCGAGLLKWQDGAVRDAAVARAESVRAATDGTTALLSYRPDT  61
            ++ R++ + LLP +AL L  GA   K+Q+G   D   AR E+V+ AT+ T A+LSY P+T
Sbjct  61   TFVRMLGFWLLPSIALLLALGAAYFKYQEGTASDEDRARVETVQVATEATVAMLSYTPET  120

Query  62   VQHDLESARSRLTGTFLDAYTQLTHDVVIPGAQQKQISAVATVAAAASVSTSADRAVVLL  121
                L++AR RLTG F  +YT LT DVVIPGAQQ++ISA A V+AAASVS S +RA+V++
Sbjct  121  AAEKLKAARDRLTGPFRGSYTSLTEDVVIPGAQQQRISATARVSAAASVSVSKNRAIVMV  180

Query  122  FVNQTITVGKDAPTTAASSVRVTLDNINGRWLISQFEP  159
            FV+QT TVGKDAPT   S V+V+LD +   WLIS FEP
Sbjct  181  FVDQTTTVGKDAPTETDSVVQVSLDKVGSHWLISGFEP  218


>gi|108798630|ref|YP_638827.1| hypothetical protein Mmcs_1661 [Mycobacterium sp. MCS]
 gi|119867726|ref|YP_937678.1| hypothetical protein Mkms_1685 [Mycobacterium sp. KMS]
 gi|120401541|ref|YP_951370.1| hypothetical protein Mvan_0520 [Mycobacterium vanbaalenii PYR-1]
 7 more sequence titles
 
gi|126434227|ref|YP_001069918.1| hypothetical protein Mjls_1634 [Mycobacterium sp. JLS]
 gi|315441861|ref|YP_004074740.1| hypothetical protein Mspyr1_01790 [Mycobacterium sp. Spyr1]
 gi|108769049|gb|ABG07771.1| hypothetical protein Mmcs_1661 [Mycobacterium sp. MCS]
 gi|119693815|gb|ABL90888.1| conserved hypothetical protein [Mycobacterium sp. KMS]
 gi|119954359|gb|ABM11364.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1]
 gi|126234027|gb|ABN97427.1| conserved hypothetical protein [Mycobacterium sp. JLS]
 gi|315260164|gb|ADT96905.1| hypothetical protein Mspyr1_01790 [Mycobacterium sp. Spyr1]
Length=219

 Score =  147 bits (372),  Expect = 4e-34, Method: Compositional matrix adjust.
 Identities = 86/158 (55%), Positives = 113/158 (72%), Gaps = 0/158 (0%)

Query  2    SWSRVIAYGLLPGLALALTCGAGLLKWQDGAVRDAAVARAESVRAATDGTTALLSYRPDT  61
            ++ R++ + LLP +AL L  GA   K+Q+G   D   AR E+V+ AT+ T A+LSY P+T
Sbjct  61   TFVRMLGFWLLPSIALLLALGAAYFKYQEGTASDEDRARVETVQVATEATVAMLSYTPET  120

Query  62   VQHDLESARSRLTGTFLDAYTQLTHDVVIPGAQQKQISAVATVAAAASVSTSADRAVVLL  121
                L++AR RLTG F  +YT LT DVVIPGAQQ++ISA A V+AAASVS S +RA+V++
Sbjct  121  AAEKLKAARDRLTGPFRGSYTSLTEDVVIPGAQQQRISATARVSAAASVSVSKNRAIVMV  180

Query  122  FVNQTITVGKDAPTTAASSVRVTLDNINGRWLISQFEP  159
            FV+QT TVGKDAPT   S V+V+LD +   WLIS FEP
Sbjct  181  FVDQTTTVGKDAPTETDSVVQVSLDKVGSHWLISGFEP  218


>gi|120405549|ref|YP_955378.1| hypothetical protein Mvan_4597 [Mycobacterium vanbaalenii PYR-1]
 gi|119958367|gb|ABM15372.1| hypothetical protein Mvan_4597 [Mycobacterium vanbaalenii PYR-1]
Length=267

 Score =  144 bits (364),  Expect = 3e-33, Method: Compositional matrix adjust.
 Identities = 97/167 (59%), Positives = 119/167 (72%), Gaps = 9/167 (5%)

Query  3    WSRVIAYGLLPGLALALTCGAGLLKWQDGAVRDAAVARAES---------VRAATDGTTA  53
            W+R+ A+ LLP LAL L  GAG LKWQD   R  A+  + S         V+ A D T A
Sbjct  101  WARLTAFVLLPALALVLALGAGYLKWQDTTFRSGAIEASPSGRLSLAEKTVQIARDSTIA  160

Query  54   LLSYRPDTVQHDLESARSRLTGTFLDAYTQLTHDVVIPGAQQKQISAVATVAAAASVSTS  113
            LLSY+PDTV+  L +AR  LTG F D+YT LT+DVVIPGA++KQISAVA+V AAASVS +
Sbjct  161  LLSYKPDTVEQQLGAARDLLTGEFRDSYTSLTNDVVIPGAKEKQISAVASVPAAASVSAT  220

Query  114  ADRAVVLLFVNQTITVGKDAPTTAASSVRVTLDNINGRWLISQFEPI  160
               AVVLLFVNQT++VG D PT  ASSVRVTL+ +  RWLIS+F+P+
Sbjct  221  PTEAVVLLFVNQTVSVGADVPTDTASSVRVTLEKVGDRWLISKFDPV  267


>gi|118473894|ref|YP_889453.1| hypothetical protein MSMEG_5207 [Mycobacterium smegmatis str. 
MC2 155]
 gi|118175181|gb|ABK76077.1| conserved hypothetical protein [Mycobacterium smegmatis str. 
MC2 155]
Length=231

 Score =  142 bits (359),  Expect = 1e-32, Method: Compositional matrix adjust.
 Identities = 71/160 (45%), Positives = 102/160 (64%), Gaps = 0/160 (0%)

Query  1    VSWSRVIAYGLLPGLALALTCGAGLLKWQDGAVRDAAVARAESVRAATDGTTALLSYRPD  60
            ++WSRV+ + ++P +AL L  G+  LKWQ     ++  AR ESV+AA D T  +LSY PD
Sbjct  70   IAWSRVLVFAVIPAVALLLAAGSAFLKWQIAWNAESDTARTESVQAAKDITVEMLSYEPD  129

Query  61   TVQHDLESARSRLTGTFLDAYTQLTHDVVIPGAQQKQISAVATVAAAASVSTSADRAVVL  120
            TV+  L  A +RLTG F D+YT L +  V+P A  ++++A A V A    S S DR  ++
Sbjct  130  TVEAHLNEALNRLTGNFRDSYTTLVNTRVVPVATTQRVTANADVPAIGVESASPDRVELV  189

Query  121  LFVNQTITVGKDAPTTAASSVRVTLDNINGRWLISQFEPI  160
            LFVNQ + VG  AP    S+VR T+   +G+WL+S+FEP+
Sbjct  190  LFVNQLVAVGDQAPQKTTSTVRATMVREDGQWLMSEFEPV  229


>gi|333989715|ref|YP_004522329.1| Mce associated membrane protein [Mycobacterium sp. JDM601]
 gi|333485683|gb|AEF35075.1| Mce associated membrane protein [Mycobacterium sp. JDM601]
Length=157

 Score =  129 bits (323),  Expect = 2e-28, Method: Compositional matrix adjust.
 Identities = 69/156 (45%), Positives = 103/156 (67%), Gaps = 0/156 (0%)

Query  5    RVIAYGLLPGLALALTCGAGLLKWQDGAVRDAAVARAESVRAATDGTTALLSYRPDTVQH  64
            R + YG+LPGL L     AG +KW DG++R   + R E++R A++ T A+LS++PDTV+ 
Sbjct  2    RRLVYGVLPGLILVAAIAAGWVKWYDGSLRLDELIRDETIREASEFTAAVLSFQPDTVER  61

Query  65   DLESARSRLTGTFLDAYTQLTHDVVIPGAQQKQISAVATVAAAASVSTSADRAVVLLFVN  124
            DL +A   +T  F +++     D++IP A+ +++ AVA V AAASV  +  RA VL+F +
Sbjct  62   DLSAAEPLMTDGFRESFVARARDLIIPDAKARKVVAVAEVPAAASVFATPRRAAVLVFAD  121

Query  125  QTITVGKDAPTTAASSVRVTLDNINGRWLISQFEPI  160
            +TITVG D P    SS RV L+ + GRWL++ FEP+
Sbjct  122  RTITVGSDEPAEVESSYRVALEKVGGRWLVADFEPV  157


>gi|111018910|ref|YP_701882.1| hypothetical protein RHA1_ro01913 [Rhodococcus jostii RHA1]
 gi|110818440|gb|ABG93724.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length=171

 Score =  114 bits (284),  Expect = 6e-24, Method: Compositional matrix adjust.
 Identities = 67/143 (47%), Positives = 88/143 (62%), Gaps = 7/143 (4%)

Query  23   AGLLKWQ----DGAVRDAAVARAESVRAATDGTTALLSYRPDTVQHDLESARSRLTGTFL  78
            AG+L +     D  V DA   RA     A+ G  ALL+Y+PDTV++D+ +A+ RLTG FL
Sbjct  27   AGVLYFTLYRPDRRVDDAV--RATVTDTASQGAIALLTYKPDTVENDVGTAKERLTGEFL  84

Query  79   DAYTQLTHDVVIPGAQQKQISAVATVAAAASVSTSADRAVVLLFVNQTIT-VGKDAPTTA  137
            D YTQ T DVV+P A++ Q++  ATVAA+  V  +AD A VLLFVNQT T   K      
Sbjct  85   DYYTQFTTDVVVPAAKESQVATQATVAASGPVEVAADTATVLLFVNQTTTSAAKPEAAVT  144

Query  138  ASSVRVTLDNINGRWLISQFEPI  160
            A+S+ V L      WLIS F+P+
Sbjct  145  ATSITVELTKSGDNWLISGFDPV  167


>gi|41408207|ref|NP_961043.1| hypothetical protein MAP2109c [Mycobacterium avium subsp. paratuberculosis 
K-10]
 gi|41396562|gb|AAS04426.1| hypothetical protein MAP_2109c [Mycobacterium avium subsp. paratuberculosis 
K-10]
Length=136

 Score =  113 bits (283),  Expect = 7e-24, Method: Compositional matrix adjust.
 Identities = 55/95 (58%), Positives = 68/95 (72%), Gaps = 0/95 (0%)

Query  1    VSWSRVIAYGLLPGLALALTCGAGLLKWQDGAVRDAAVARAESVRAATDGTTALLSYRPD  60
            ++W RV  YG+LPGLAL L  GAG L+W  G+  D A ARA+SV+AA +   ALLSYR D
Sbjct  32   IAWPRVFGYGILPGLALVLALGAGYLRWSAGSADDLAQARAQSVQAAREDAVALLSYRAD  91

Query  61   TVQHDLESARSRLTGTFLDAYTQLTHDVVIPGAQQ  95
            +V  DL +AR RLTG F DAY +LT  VVIPGA++
Sbjct  92   SVDKDLAAARDRLTGEFKDAYAELTRQVVIPGAKE  126


>gi|8920264|emb|CAB96436.1| hypothetical protein [Mycobacterium avium subsp. paratuberculosis]
Length=126

 Score =  113 bits (283),  Expect = 8e-24, Method: Compositional matrix adjust.
 Identities = 55/95 (58%), Positives = 68/95 (72%), Gaps = 0/95 (0%)

Query  1    VSWSRVIAYGLLPGLALALTCGAGLLKWQDGAVRDAAVARAESVRAATDGTTALLSYRPD  60
            ++W RV  YG+LPGLAL L  GAG L+W  G+  D A ARA+SV+AA +   ALLSYR D
Sbjct  32   IAWPRVFGYGILPGLALVLALGAGYLRWSAGSADDLAQARAQSVQAAREDAVALLSYRAD  91

Query  61   TVQHDLESARSRLTGTFLDAYTQLTHDVVIPGAQQ  95
            +V  DL +AR RLTG F DAY +LT  VVIPGA++
Sbjct  92   SVDKDLAAARDRLTGEFKDAYAELTRQVVIPGAKE  126


>gi|336461652|gb|EGO40515.1| hypothetical protein MAPs_28130 [Mycobacterium avium subsp. paratuberculosis 
S397]
Length=124

 Score =  111 bits (278),  Expect = 3e-23, Method: Compositional matrix adjust.
 Identities = 55/93 (60%), Positives = 66/93 (71%), Gaps = 0/93 (0%)

Query  1    VSWSRVIAYGLLPGLALALTCGAGLLKWQDGAVRDAAVARAESVRAATDGTTALLSYRPD  60
            ++W RV  YG+LPGLAL L  GAG L+W  G+  D A ARA+SV+AA +   ALLSYR D
Sbjct  32   IAWPRVFGYGILPGLALVLALGAGYLRWSAGSADDLAQARAQSVQAAREDAVALLSYRAD  91

Query  61   TVQHDLESARSRLTGTFLDAYTQLTHDVVIPGA  93
            +V  DL +AR RLTG F DAY +LT  VVIPGA
Sbjct  92   SVDKDLAAARDRLTGEFKDAYAELTRQVVIPGA  124


>gi|226361010|ref|YP_002778788.1| hypothetical protein ROP_15960 [Rhodococcus opacus B4]
 gi|226239495|dbj|BAH49843.1| hypothetical protein [Rhodococcus opacus B4]
Length=171

 Score =  110 bits (275),  Expect = 7e-23, Method: Compositional matrix adjust.
 Identities = 59/122 (49%), Positives = 79/122 (65%), Gaps = 1/122 (0%)

Query  40   RAESVRAATDGTTALLSYRPDTVQHDLESARSRLTGTFLDAYTQLTHDVVIPGAQQKQIS  99
            RA     A+ G  ALLSY PDTV++D+ +A++RLTG FLD YTQ T DVV+P A++ +++
Sbjct  46   RAAVTDTASQGAVALLSYGPDTVENDVGAAKARLTGEFLDYYTQFTTDVVVPAAKESRVA  105

Query  100  AVATVAAAASVSTSADRAVVLLFVNQTIT-VGKDAPTTAASSVRVTLDNINGRWLISQFE  158
              ATVAA+  V  +AD A VLLFV+QT T   K  P    +S+ V L      WLIS F+
Sbjct  106  TQATVAASGPVEVAADTATVLLFVDQTTTSAAKPEPAVTQTSIAVELTKSGDDWLISGFD  165

Query  159  PI  160
            P+
Sbjct  166  PV  167


>gi|118465083|ref|YP_880198.1| hypothetical protein MAV_0937 [Mycobacterium avium 104]
 gi|254773827|ref|ZP_05215343.1| hypothetical protein MaviaA2_04002 [Mycobacterium avium subsp. 
avium ATCC 25291]
 gi|118166370|gb|ABK67267.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=187

 Score =  109 bits (272),  Expect = 2e-22, Method: Compositional matrix adjust.
 Identities = 67/153 (44%), Positives = 90/153 (59%), Gaps = 9/153 (5%)

Query  15   LALALTCGAG-----LLKWQDGAVRDAAVARAESVRAATDGTTALLSYRPDTVQHDLESA  69
            ++L L  GAG       ++      DA VA A  V AA+DGT ALLSY PDT+  D  +A
Sbjct  37   ISLLLISGAGTAWLYFKEYLPDKRTDARVASA-VVNAASDGTVALLSYSPDTLDKDFAAA  95

Query  70   RSRLTGTFLDAYTQLTHDVVIPGAQQKQISAVATVAAAASVSTSADRAVVLLFVNQTITV  129
            +S L+G FL  Y Q T  +V P A+QK +   A V  AA      D AVVL+ V+Q+ T 
Sbjct  96   KSHLSGDFLSYYNQFTEQIVAPAAKQKSLKTNARVLGAAVSDLRPDSAVVLVLVDQS-TT  154

Query  130  GKDA--PTTAASSVRVTLDNINGRWLISQFEPI  160
             KD   P  A+SSV V+L  +NG+WLI++F+P+
Sbjct  155  SKDNPDPAMASSSVLVSLTKVNGKWLITKFDPV  187


>gi|41406848|ref|NP_959684.1| hypothetical protein MAP0750c [Mycobacterium avium subsp. paratuberculosis 
K-10]
 gi|41395198|gb|AAS03067.1| hypothetical protein MAP_0750c [Mycobacterium avium subsp. paratuberculosis 
K-10]
 gi|336461114|gb|EGO39992.1| hypothetical protein MAPs_33180 [Mycobacterium avium subsp. paratuberculosis 
S397]
Length=187

 Score =  109 bits (272),  Expect = 2e-22, Method: Compositional matrix adjust.
 Identities = 67/153 (44%), Positives = 90/153 (59%), Gaps = 9/153 (5%)

Query  15   LALALTCGAG-----LLKWQDGAVRDAAVARAESVRAATDGTTALLSYRPDTVQHDLESA  69
            ++L L  GAG       ++      DA VA A  V AA+DGT ALLSY PDT+  D  +A
Sbjct  37   ISLLLISGAGTAWLYFKEYLPDKRTDARVASA-VVNAASDGTVALLSYSPDTLDKDFAAA  95

Query  70   RSRLTGTFLDAYTQLTHDVVIPGAQQKQISAVATVAAAASVSTSADRAVVLLFVNQTITV  129
            +S L+G FL  Y Q T  +V P A+QK +   A V  AA      D AVVL+ V+Q+ T 
Sbjct  96   KSHLSGDFLSYYNQFTEQIVAPAAKQKSLKTNARVLGAAVSDLRPDSAVVLVLVDQS-TT  154

Query  130  GKDA--PTTAASSVRVTLDNINGRWLISQFEPI  160
             KD   P  A+SSV V+L  +NG+WLI++F+P+
Sbjct  155  SKDNPDPAMASSSVLVSLTKVNGKWLITKFDPV  187


>gi|240171445|ref|ZP_04750104.1| hypothetical protein MkanA1_19181 [Mycobacterium kansasii ATCC 
12478]
Length=199

 Score =  108 bits (269),  Expect = 3e-22, Method: Compositional matrix adjust.
 Identities = 57/114 (50%), Positives = 71/114 (63%), Gaps = 1/114 (0%)

Query  48   TDGTTALLSYRPDTVQHDLESARSRLTGTFLDAYTQLTHDVVIPGAQQKQISAVATVAAA  107
            TDGT A+LSY PDT++ D  SARS LTG FL  Y Q T  +V P A+QK +   A V  A
Sbjct  86   TDGTIAILSYSPDTLERDFSSARSHLTGDFLSYYDQFTQQIVAPAAKQKSVKTSAVVLRA  145

Query  108  ASVSTSADRAVVLLFVNQ-TITVGKDAPTTAASSVRVTLDNINGRWLISQFEPI  160
            A      D AVVL+FVNQ T +  +  PT  +SSV V L   +G+WLIS F+P+
Sbjct  146  AVSELHPDSAVVLVFVNQSTQSADRPEPTLTSSSVLVKLTKADGKWLISSFDPV  199


>gi|118471039|ref|YP_887185.1| hypothetical protein MSMEG_2865 [Mycobacterium smegmatis str. 
MC2 155]
 gi|118172326|gb|ABK73222.1| conserved hypothetical protein [Mycobacterium smegmatis str. 
MC2 155]
Length=190

 Score =  107 bits (266),  Expect = 7e-22, Method: Compositional matrix adjust.
 Identities = 58/120 (49%), Positives = 77/120 (65%), Gaps = 1/120 (0%)

Query  42   ESVRAATDGTTALLSYRPDTVQHDLESARSRLTGTFLDAYTQLTHDVVIPGAQQKQISAV  101
            E V AA+ GT ALLSY PDT++ DL  ARS++TG FL  Y + T DVV P  QQK I+A 
Sbjct  71   EVVAAASSGTVALLSYAPDTLEADLAGARSKMTGDFLTYYGKFTSDVVAPAVQQKGITAT  130

Query  102  ATVAAAASVSTSADRAVVLLFVNQ-TITVGKDAPTTAASSVRVTLDNINGRWLISQFEPI  160
            A +  A  +    D A VL+F+NQ T +  +  P+  ASSV V+L  ++G WLIS F+P+
Sbjct  131  AQIVRAGMMEIRPDSAKVLVFLNQETSSKERPDPSLTASSVVVSLTKVDGNWLISAFDPV  190


>gi|31792558|ref|NP_855051.1| hypothetical protein Mb1397c [Mycobacterium bovis AF2122/97]
 gi|121637293|ref|YP_977516.1| hypothetical protein BCG_1424c [Mycobacterium bovis BCG str. 
Pasteur 1173P2]
 gi|224989767|ref|YP_002644454.1| hypothetical protein JTY_1398 [Mycobacterium bovis BCG str. Tokyo 
172]
 gi|31618147|emb|CAD94258.1| POSSIBLE MEMBRANE PROTEIN [Mycobacterium bovis AF2122/97]
 gi|121492940|emb|CAL71411.1| Possible membrane protein [Mycobacterium bovis BCG str. Pasteur 
1173P2]
 gi|224772880|dbj|BAH25686.1| hypothetical protein JTY_1398 [Mycobacterium bovis BCG str. Tokyo 
172]
 gi|341601311|emb|CCC63984.1| possible membrane protein [Mycobacterium bovis BCG str. Moreau 
RDJ]
Length=220

 Score =  105 bits (263),  Expect = 2e-21, Method: Compositional matrix adjust.
 Identities = 57/115 (50%), Positives = 73/115 (64%), Gaps = 3/115 (2%)

Query  48   TDGTTALLSYRPDTVQHDLESARSRLTGTFLDAYTQLTHDVVIPGAQQKQISAVATVAAA  107
            +DGT ALLSY PDT+  D  +ARS L G FL  Y Q T  +V P A+QK +   A V  A
Sbjct  107  SDGTIALLSYSPDTLDQDFATARSHLAGDFLSYYDQFTQQIVAPAAKQKSLKTTAKVVRA  166

Query  108  ASVSTSADRAVVLLFVNQTITVGKDA--PTTAASSVRVTLDNINGRWLISQFEPI  160
            A      D AVVL+FV+Q+ T  KD+  P+ AASSV VTL  ++G WLI++F P+
Sbjct  167  AVSELHPDSAVVLVFVDQS-TTSKDSPNPSMAASSVMVTLAKVDGNWLITKFTPV  220


>gi|15608502|ref|NP_215878.1| hypothetical protein Rv1362c [Mycobacterium tuberculosis H37Rv]
 gi|15840819|ref|NP_335856.1| hypothetical protein MT1407 [Mycobacterium tuberculosis CDC1551]
 gi|148661152|ref|YP_001282675.1| hypothetical protein MRA_1371 [Mycobacterium tuberculosis H37Ra]
 73 more sequence titles
 
gi|148822584|ref|YP_001287338.1| hypothetical protein TBFG_11393 [Mycobacterium tuberculosis F11]
 gi|167969113|ref|ZP_02551390.1| hypothetical membrane protein [Mycobacterium tuberculosis H37Ra]
 gi|253799588|ref|YP_003032589.1| hypothetical protein TBMG_02616 [Mycobacterium tuberculosis KZN 
1435]
 gi|254231613|ref|ZP_04924940.1| hypothetical protein TBCG_01344 [Mycobacterium tuberculosis C]
 gi|254364254|ref|ZP_04980300.1| hypothetical membrane protein [Mycobacterium tuberculosis str. 
Haarlem]
 gi|254550377|ref|ZP_05140824.1| hypothetical protein Mtube_07940 [Mycobacterium tuberculosis 
'98-R604 INH-RIF-EM']
 gi|289442806|ref|ZP_06432550.1| membrane protein [Mycobacterium tuberculosis T46]
 gi|289446958|ref|ZP_06436702.1| membrane protein [Mycobacterium tuberculosis CPHL_A]
 gi|289554846|ref|ZP_06444056.1| membrane protein [Mycobacterium tuberculosis KZN 605]
 gi|289569376|ref|ZP_06449603.1| membrane protein [Mycobacterium tuberculosis T17]
 gi|289574029|ref|ZP_06454256.1| membrane protein [Mycobacterium tuberculosis K85]
 gi|289745114|ref|ZP_06504492.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
 gi|289749918|ref|ZP_06509296.1| membrane protein [Mycobacterium tuberculosis T92]
 gi|289753444|ref|ZP_06512822.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
 gi|289757467|ref|ZP_06516845.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
 gi|289761523|ref|ZP_06520901.1| membrane protein [Mycobacterium tuberculosis GM 1503]
 gi|294994921|ref|ZP_06800612.1| hypothetical protein Mtub2_10530 [Mycobacterium tuberculosis 
210]
 gi|297633917|ref|ZP_06951697.1| hypothetical protein MtubK4_07335 [Mycobacterium tuberculosis 
KZN 4207]
 gi|297730906|ref|ZP_06960024.1| hypothetical protein MtubKR_07435 [Mycobacterium tuberculosis 
KZN R506]
 gi|298524869|ref|ZP_07012278.1| hypothetical membrane protein [Mycobacterium tuberculosis 94_M4241A]
 gi|306775543|ref|ZP_07413880.1| membrane protein [Mycobacterium tuberculosis SUMu001]
 gi|306780693|ref|ZP_07419030.1| membrane protein [Mycobacterium tuberculosis SUMu002]
 gi|306784093|ref|ZP_07422415.1| membrane protein [Mycobacterium tuberculosis SUMu003]
 gi|306788460|ref|ZP_07426782.1| membrane protein [Mycobacterium tuberculosis SUMu004]
 gi|306792786|ref|ZP_07431088.1| membrane protein [Mycobacterium tuberculosis SUMu005]
 gi|306797186|ref|ZP_07435488.1| membrane protein [Mycobacterium tuberculosis SUMu006]
 gi|306803067|ref|ZP_07439735.1| membrane protein [Mycobacterium tuberculosis SUMu008]
 gi|306807263|ref|ZP_07443931.1| membrane protein [Mycobacterium tuberculosis SUMu007]
 gi|306967461|ref|ZP_07480122.1| membrane protein [Mycobacterium tuberculosis SUMu009]
 gi|306971652|ref|ZP_07484313.1| membrane protein [Mycobacterium tuberculosis SUMu010]
 gi|307079363|ref|ZP_07488533.1| membrane protein [Mycobacterium tuberculosis SUMu011]
 gi|307083928|ref|ZP_07493041.1| membrane protein [Mycobacterium tuberculosis SUMu012]
 gi|313658239|ref|ZP_07815119.1| hypothetical protein MtubKV_07455 [Mycobacterium tuberculosis 
KZN V2475]
 gi|339631431|ref|YP_004723073.1| hypothetical protein MAF_13860 [Mycobacterium africanum GM041182]
 gi|340626378|ref|YP_004744830.1| hypothetical protein MCAN_13801 [Mycobacterium canettii CIPT 
140010059]
 gi|1723067|sp|Q11032.1|Y1362_MYCTU RecName: Full=Uncharacterized protein Rv1362c/MT1407
 gi|1419065|emb|CAA99967.1| POSSIBLE MEMBRANE PROTEIN [Mycobacterium tuberculosis H37Rv]
 gi|13881016|gb|AAK45670.1| hypothetical protein MT1407 [Mycobacterium tuberculosis CDC1551]
 gi|124600672|gb|EAY59682.1| hypothetical protein TBCG_01344 [Mycobacterium tuberculosis C]
 gi|134149768|gb|EBA41813.1| hypothetical membrane protein [Mycobacterium tuberculosis str. 
Haarlem]
 gi|148505304|gb|ABQ73113.1| putative membrane protein [Mycobacterium tuberculosis H37Ra]
 gi|148721111|gb|ABR05736.1| hypothetical membrane protein [Mycobacterium tuberculosis F11]
 gi|253321091|gb|ACT25694.1| membrane protein [Mycobacterium tuberculosis KZN 1435]
 gi|289415725|gb|EFD12965.1| membrane protein [Mycobacterium tuberculosis T46]
 gi|289419916|gb|EFD17117.1| membrane protein [Mycobacterium tuberculosis CPHL_A]
 gi|289439478|gb|EFD21971.1| membrane protein [Mycobacterium tuberculosis KZN 605]
 gi|289538460|gb|EFD43038.1| membrane protein [Mycobacterium tuberculosis K85]
 gi|289543130|gb|EFD46778.1| membrane protein [Mycobacterium tuberculosis T17]
 gi|289685642|gb|EFD53130.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
 gi|289690505|gb|EFD57934.1| membrane protein [Mycobacterium tuberculosis T92]
 gi|289694031|gb|EFD61460.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
 gi|289709029|gb|EFD73045.1| membrane protein [Mycobacterium tuberculosis GM 1503]
 gi|289713031|gb|EFD77043.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
 gi|298494663|gb|EFI29957.1| hypothetical membrane protein [Mycobacterium tuberculosis 94_M4241A]
 gi|308215969|gb|EFO75368.1| membrane protein [Mycobacterium tuberculosis SUMu001]
 gi|308326438|gb|EFP15289.1| membrane protein [Mycobacterium tuberculosis SUMu002]
 gi|308331161|gb|EFP20012.1| membrane protein [Mycobacterium tuberculosis SUMu003]
 gi|308334943|gb|EFP23794.1| membrane protein [Mycobacterium tuberculosis SUMu004]
 gi|308338748|gb|EFP27599.1| membrane protein [Mycobacterium tuberculosis SUMu005]
 gi|308342447|gb|EFP31298.1| membrane protein [Mycobacterium tuberculosis SUMu006]
 gi|308346287|gb|EFP35138.1| membrane protein [Mycobacterium tuberculosis SUMu007]
 gi|308350215|gb|EFP39066.1| membrane protein [Mycobacterium tuberculosis SUMu008]
 gi|308354858|gb|EFP43709.1| membrane protein [Mycobacterium tuberculosis SUMu009]
 gi|308358831|gb|EFP47682.1| membrane protein [Mycobacterium tuberculosis SUMu010]
 gi|308362769|gb|EFP51620.1| membrane protein [Mycobacterium tuberculosis SUMu011]
 gi|308366416|gb|EFP55267.1| membrane protein [Mycobacterium tuberculosis SUMu012]
 gi|326902985|gb|EGE49918.1| membrane protein [Mycobacterium tuberculosis W-148]
 gi|328459335|gb|AEB04758.1| membrane protein [Mycobacterium tuberculosis KZN 4207]
 gi|339294340|gb|AEJ46451.1| hypothetical protein CCDC5079_1261 [Mycobacterium tuberculosis 
CCDC5079]
 gi|339297979|gb|AEJ50089.1| hypothetical protein CCDC5180_1252 [Mycobacterium tuberculosis 
CCDC5180]
 gi|339330787|emb|CCC26458.1| putative membrane protein [Mycobacterium africanum GM041182]
 gi|340004568|emb|CCC43712.1| putative membrane protein [Mycobacterium canettii CIPT 140010059]
 gi|344219194|gb|AEM99824.1| hypothetical protein MTCTRI2_1401 [Mycobacterium tuberculosis 
CTRI-2]
Length=220

 Score =  105 bits (263),  Expect = 2e-21, Method: Compositional matrix adjust.
 Identities = 57/115 (50%), Positives = 73/115 (64%), Gaps = 3/115 (2%)

Query  48   TDGTTALLSYRPDTVQHDLESARSRLTGTFLDAYTQLTHDVVIPGAQQKQISAVATVAAA  107
            +DGT ALLSY PDT+  D  +ARS L G FL  Y Q T  +V P A+QK +   A V  A
Sbjct  107  SDGTIALLSYSPDTLDQDFATARSHLAGDFLSYYDQFTQQIVAPAAKQKSLKTTAKVVRA  166

Query  108  ASVSTSADRAVVLLFVNQTITVGKDA--PTTAASSVRVTLDNINGRWLISQFEPI  160
            A      D AVVL+FV+Q+ T  KD+  P+ AASSV VTL  ++G WLI++F P+
Sbjct  167  AVSELHPDSAVVLVFVDQS-TTSKDSPNPSMAASSVMVTLAKVDGNWLITKFTPV  220


>gi|254818318|ref|ZP_05223319.1| hypothetical protein MintA_00240 [Mycobacterium intracellulare 
ATCC 13950]
Length=190

 Score =  105 bits (263),  Expect = 2e-21, Method: Compositional matrix adjust.
 Identities = 58/127 (46%), Positives = 81/127 (64%), Gaps = 2/127 (1%)

Query  35   DAAVARAESVRAATDGTTALLSYRPDTVQHDLESARSRLTGTFLDAYTQLTHDVVIPGAQ  94
            DA+VA A  V AA+DGT ALLSY PD++  D  +A+S L+G FL  Y Q T  +V P A+
Sbjct  65   DASVATA-VVNAASDGTVALLSYSPDSLDKDFATAKSHLSGDFLSYYNQFTEQIVAPAAK  123

Query  95   QKQISAVATVAAAASVSTSADRAVVLLFVNQTITVGKDA-PTTAASSVRVTLDNINGRWL  153
            QK +   A V  AA      + AVVL+ V+Q+ T   +  P  A+SSV V+L  +NG+WL
Sbjct  124  QKSLKTTARVLGAAVQELHPNSAVVLVLVDQSTTSKDNPDPAMASSSVLVSLTRVNGKWL  183

Query  154  ISQFEPI  160
            I++F+P+
Sbjct  184  ITKFDPV  190


>gi|315443571|ref|YP_004076450.1| hypothetical protein Mspyr1_19540 [Mycobacterium sp. Spyr1]
 gi|315261874|gb|ADT98615.1| hypothetical protein Mspyr1_19540 [Mycobacterium sp. Spyr1]
Length=209

 Score =  105 bits (262),  Expect = 2e-21, Method: Compositional matrix adjust.
 Identities = 53/113 (47%), Positives = 74/113 (66%), Gaps = 3/113 (2%)

Query  50   GTTALLSYRPDTVQHDLESARSRLTGTFLDAYTQLTHDVVIPGAQQKQISAVATVAAAAS  109
            GT ALLSY P+++  D  +A+S+LTG FLD YTQ T  +V P A++K +   A+V  A  
Sbjct  98   GTIALLSYSPESLDQDFANAKSKLTGDFLDYYTQFTEQIVTPAAKEKSVKTAASVVRAGV  157

Query  110  VSTSADRAVVLLFVNQTITVGKDAP--TTAASSVRVTLDNINGRWLISQFEPI  160
               +AD A VL+F+NQT T  K+ P    AASSV+V +  I+G WLI+ F+P+
Sbjct  158  SQIAADSAEVLVFINQT-TTSKENPDGAFAASSVKVGMKKIDGNWLIASFDPV  209


>gi|145223114|ref|YP_001133792.1| hypothetical protein Mflv_2527 [Mycobacterium gilvum PYR-GCK]
 gi|145215600|gb|ABP45004.1| hypothetical protein Mflv_2527 [Mycobacterium gilvum PYR-GCK]
Length=209

 Score =  105 bits (262),  Expect = 2e-21, Method: Compositional matrix adjust.
 Identities = 53/113 (47%), Positives = 74/113 (66%), Gaps = 3/113 (2%)

Query  50   GTTALLSYRPDTVQHDLESARSRLTGTFLDAYTQLTHDVVIPGAQQKQISAVATVAAAAS  109
            GT ALLSY P+++  D  +A+S+LTG FLD YTQ T  +V P A++K +   A+V  A  
Sbjct  98   GTIALLSYSPESLDQDFANAKSKLTGDFLDYYTQFTEQIVTPAAKEKSVKTAASVVRAGV  157

Query  110  VSTSADRAVVLLFVNQTITVGKDAP--TTAASSVRVTLDNINGRWLISQFEPI  160
               +AD A VL+F+NQT T  K+ P    AASSV+V +  I+G WLI+ F+P+
Sbjct  158  SQIAADSAEVLVFINQT-TTSKENPDGAFAASSVKVGMKKIDGNWLIASFDPV  209


>gi|296169605|ref|ZP_06851225.1| twin-arginine translocation pathway signal [Mycobacterium parascrofulaceum 
ATCC BAA-614]
 gi|295895871|gb|EFG75566.1| twin-arginine translocation pathway signal [Mycobacterium parascrofulaceum 
ATCC BAA-614]
Length=224

 Score =  104 bits (260),  Expect = 4e-21, Method: Compositional matrix adjust.
 Identities = 59/114 (52%), Positives = 69/114 (61%), Gaps = 3/114 (2%)

Query  49   DGTTALLSYRPDTVQHDLESARSRLTGTFLDAYTQLTHDVVIPGAQQKQISAVATVAAAA  108
            DGT A+LSY PDT+  D  SA+S LTG FL  Y Q T  +V P A+QK +   A V  AA
Sbjct  112  DGTVAVLSYSPDTLDRDFSSAKSHLTGDFLSYYDQFTQQIVAPAAKQKAVKTTAVVLRAA  171

Query  109  SVSTSADRAVVLLFVNQTITVGKD--APTTAASSVRVTLDNINGRWLISQFEPI  160
                  + AVVLLFVNQ+ T  KD   PT   SSV VTL   +G+WLIS F PI
Sbjct  172  VSDLHPNSAVVLLFVNQS-TQSKDRPEPTFTNSSVSVTLTKADGKWLISSFNPI  224


>gi|118468347|ref|YP_889027.1| hypothetical protein MSMEG_4770 [Mycobacterium smegmatis str. 
MC2 155]
 gi|118169634|gb|ABK70530.1| conserved hypothetical protein [Mycobacterium smegmatis str. 
MC2 155]
Length=200

 Score =  104 bits (260),  Expect = 4e-21, Method: Compositional matrix adjust.
 Identities = 56/115 (49%), Positives = 73/115 (64%), Gaps = 3/115 (2%)

Query  48   TDGTTALLSYRPDTVQHDLESARSRLTGTFLDAYTQLTHDVVIPGAQQKQISAVATVAAA  107
            TDGT ALLSY P+++  D  +A++ LTG FL  YT  T  VV P AQQK++   ATV   
Sbjct  87   TDGTVALLSYAPESLDQDFATAKTHLTGDFLSYYTDFTTKVVAPAAQQKKVKTKATVVNG  146

Query  108  ASVSTSADRAVVLLFVNQTITVGKDAP--TTAASSVRVTLDNINGRWLISQFEPI  160
            A      + AVVLLF+NQT T  ++ P  + A SSV+V L  I+G WLIS F+P+
Sbjct  147  AVSEIKPESAVVLLFINQT-TTSQEIPDGSFATSSVKVGLTKIDGNWLISTFDPV  200


>gi|183984654|ref|YP_001852945.1| hypothetical protein MMAR_4686 [Mycobacterium marinum M]
 gi|183177980|gb|ACC43090.1| conserved hypothetical membrane protein [Mycobacterium marinum 
M]
Length=193

 Score =  103 bits (257),  Expect = 8e-21, Method: Compositional matrix adjust.
 Identities = 55/114 (49%), Positives = 68/114 (60%), Gaps = 1/114 (0%)

Query  48   TDGTTALLSYRPDTVQHDLESARSRLTGTFLDAYTQLTHDVVIPGAQQKQISAVATVAAA  107
            +DG  A+LSY PDT+  D  SARS LTG FL  Y Q T  +V P A++K +   A V  A
Sbjct  80   SDGAIAILSYSPDTLDRDFSSARSHLTGEFLSYYDQFTQQIVAPAAKRKSVRTSAVVLRA  139

Query  108  ASVSTSADRAVVLLFVNQTI-TVGKDAPTTAASSVRVTLDNINGRWLISQFEPI  160
            A      D AVVLLFVNQT  +  +  P   +SSV V L   NG+WLIS F+P+
Sbjct  140  AISELHPDSAVVLLFVNQTTQSADRPEPALTSSSVLVKLTKANGKWLISSFDPV  193


>gi|226361927|ref|YP_002779705.1| hypothetical protein ROP_25130 [Rhodococcus opacus B4]
 gi|226240412|dbj|BAH50760.1| hypothetical membrane protein [Rhodococcus opacus B4]
Length=256

 Score =  102 bits (255),  Expect = 1e-20, Method: Compositional matrix adjust.
 Identities = 60/138 (44%), Positives = 86/138 (63%), Gaps = 4/138 (2%)

Query  24   GLLKWQDGAVRDAAVARAESVRAATDGTTALLSYRPDTVQHDLESARSRLTGTFLDAYTQ  83
            G+ +  D ++ DA   RA +V+ A+DG  ALLSY P+TV  DL+ A + LTG  L++Y Q
Sbjct  121  GIQRADDVSISDA---RAATVQLASDGAAALLSYTPETVDEDLDRASALLTGDLLNSYRQ  177

Query  84   LTHDVVIPGAQQKQISAVATVAAAASVSTSADRAVVLLFVNQTITVGK-DAPTTAASSVR  142
            L  DVV P A+ K ++  A    AA  S + D A VL++VNQT T+     P+   + VR
Sbjct  178  LAGDVVGPTAKDKGVTMQAVPVGAAVESVTTDTARVLVYVNQTTTMADTPEPSQTQNVVR  237

Query  143  VTLDNINGRWLISQFEPI  160
            VTL +++G WLIS F+P+
Sbjct  238  VTLSHVDGNWLISGFDPL  255


>gi|108800619|ref|YP_640816.1| twin-arginine translocation pathway signal [Mycobacterium sp. 
MCS]
 gi|119869758|ref|YP_939710.1| twin-arginine translocation pathway signal [Mycobacterium sp. 
KMS]
 gi|108771038|gb|ABG09760.1| Twin-arginine translocation pathway signal [Mycobacterium sp. 
MCS]
 gi|119695847|gb|ABL92920.1| twin-arginine translocation pathway signal [Mycobacterium sp. 
KMS]
Length=209

 Score =  102 bits (253),  Expect = 2e-20, Method: Compositional matrix adjust.
 Identities = 60/154 (39%), Positives = 89/154 (58%), Gaps = 10/154 (6%)

Query  15   LALALTCGAG------LLKWQDGAVRDAAVARAESVRAATDGTTALLSYRPDTVQHDLES  68
            LA+AL    G        +++     D+  A+  ++ AA+  + +LL+Y P+T+  D  +
Sbjct  58   LAIALIASVGATAWLYFFQFRPDQETDSEAAKV-AIDAASQASVSLLTYSPETLDKDFAA  116

Query  69   ARSRLTGTFLDAYTQLTHDVVIPGAQQKQISAVATVAAAASVSTSADRAVVLLFVNQTIT  128
            A+++LTG FLD YT  T  +V P A+QKQ+   A V  AA    S + A VLLF+NQT T
Sbjct  117  AKTQLTGDFLDYYTDFTEKIVTPAAKQKQVKTSAAVVQAALSQLSPESAEVLLFINQT-T  175

Query  129  VGKDAP--TTAASSVRVTLDNINGRWLISQFEPI  160
              K+ P    AASSV+V +  I+G W IS F+P+
Sbjct  176  TSKENPDGAYAASSVKVGMTKIDGAWKISSFDPV  209


>gi|342861409|ref|ZP_08718057.1| hypothetical protein MCOL_21096 [Mycobacterium colombiense CECT 
3035]
 gi|342131309|gb|EGT84590.1| hypothetical protein MCOL_21096 [Mycobacterium colombiense CECT 
3035]
Length=213

 Score =  102 bits (253),  Expect = 2e-20, Method: Compositional matrix adjust.
 Identities = 60/130 (47%), Positives = 81/130 (63%), Gaps = 5/130 (3%)

Query  33   VRDAAVARAESVRAATDGTTALLSYRPDTVQHDLESARSRLTGTFLDAYTQLTHDVVIPG  92
            + DA+   A  + AA+DGT ALLSY PD +Q DL +A+S LTG FL  Y + T  +V P 
Sbjct  87   INDASAKSA--IGAASDGTVALLSYSPDRLQSDLTAAKSHLTGEFLTYYGKFTDQIVAPA  144

Query  93   AQQKQISAVATVAAAASVSTSADRAVVLLFVNQTITVGKDAPT--TAASSVRVTLDNING  150
            A++K +S  A +  AA      D A VL+F++QT T  KDAP     ASSV V+L  ++G
Sbjct  145  AKEKAVSTKAVIQRAAIADLHDDTARVLVFLDQT-TTSKDAPEPVQTASSVMVSLSKVHG  203

Query  151  RWLISQFEPI  160
             WLIS F+P+
Sbjct  204  AWLISAFDPV  213


>gi|118619079|ref|YP_907411.1| hypothetical protein MUL_3859 [Mycobacterium ulcerans Agy99]
 gi|118571189|gb|ABL05940.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99]
Length=220

 Score =  100 bits (249),  Expect = 7e-20, Method: Compositional matrix adjust.
 Identities = 60/128 (47%), Positives = 78/128 (61%), Gaps = 4/128 (3%)

Query  35   DAAVARAESVRAATDGTTALLSYRPDTVQHDLESARSRLTGTFLDAYTQLTHDVVIPGAQ  94
            D AVAR ++V AA+DGT ALLSY PDT+  D  +A+S L+G FL  Y Q T   V P A+
Sbjct  95   DPAVAR-QAVSAASDGTVALLSYSPDTLDDDFAAAKSHLSGDFLAYYEQFTEQFVAPAAK  153

Query  95   QKQISAVATVAAAASVSTSADRAVVLLFVNQTITVGKDA--PTTAASSVRVTLDNINGRW  152
            QK +   A V  AA        A VLLFV+Q+ T  KD   PT    SV V++  I+G+W
Sbjct  154  QKALKTSAQVVRAAVSELHPGSAEVLLFVDQS-TTSKDHPDPTMMPISVLVSMAQIDGKW  212

Query  153  LISQFEPI  160
            LI++F P+
Sbjct  213  LITKFTPV  220


>gi|126436243|ref|YP_001071934.1| twin-arginine translocation pathway signal [Mycobacterium sp. 
JLS]
 gi|126236043|gb|ABN99443.1| twin-arginine translocation pathway signal [Mycobacterium sp. 
JLS]
Length=209

 Score =  100 bits (249),  Expect = 8e-20, Method: Compositional matrix adjust.
 Identities = 61/164 (38%), Positives = 93/164 (57%), Gaps = 10/164 (6%)

Query  5    RVIAYGLLPGLALALTCGAG------LLKWQDGAVRDAAVARAESVRAATDGTTALLSYR  58
            RV+    +  LA+AL    G        +++     D+  A+  ++ AA+  + +LL+Y 
Sbjct  48   RVVGAVGMAVLAIALIASVGATAWLYFFQFRPDQETDSEAAKV-AIDAASQASVSLLTYS  106

Query  59   PDTVQHDLESARSRLTGTFLDAYTQLTHDVVIPGAQQKQISAVATVAAAASVSTSADRAV  118
            P+T+  D  +A+++LTG FL+ YT  T  +V P A+QKQ+   A V  AA    S + A 
Sbjct  107  PETLDKDFAAAKTQLTGDFLNYYTDFTEKIVTPAAKQKQVKTSAAVVQAALSQLSPESAE  166

Query  119  VLLFVNQTITVGKDAP--TTAASSVRVTLDNINGRWLISQFEPI  160
            VLLF+NQT T  K+ P    AASSV+V +  I+G W IS F+P+
Sbjct  167  VLLFINQT-TTSKENPDGAYAASSVKVGMTKIDGAWKISSFDPV  209



Lambda     K      H
   0.317    0.128    0.364 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 127750398496


  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
    Posted date:  Sep 5, 2011  4:36 AM
  Number of letters in database: 5,219,829,388
  Number of sequences in database:  15,229,318



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40