BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv1975
Length=221
Score E
Sequences producing significant alignments: (Bits) Value
gi|15609112|ref|NP_216491.1| hypothetical protein Rv1975 [Mycoba... 449 1e-124
gi|289443459|ref|ZP_06433203.1| conserved hypothetical protein [... 448 2e-124
gi|289447592|ref|ZP_06437336.1| conserved hypothetical protein [... 448 3e-124
gi|167970503|ref|ZP_02552780.1| hypothetical protein MtubH3_2171... 428 2e-118
gi|253798977|ref|YP_003031978.1| hypothetical protein TBMG_02015... 414 5e-114
gi|183982894|ref|YP_001851185.1| hypothetical protein MMAR_2890 ... 353 9e-96
gi|254819933|ref|ZP_05224934.1| hypothetical protein MintA_08411... 272 3e-71
gi|118463096|ref|YP_881715.1| hypothetical protein MAV_2523 [Myc... 271 7e-71
gi|342857620|ref|ZP_08714276.1| hypothetical protein MCOL_02050 ... 264 9e-69
gi|240170709|ref|ZP_04749368.1| hypothetical protein MkanA1_1544... 229 2e-58
gi|120401585|ref|YP_951414.1| hypothetical protein Mvan_0567 [My... 220 9e-56
gi|118619124|ref|YP_907456.1| hypothetical protein MUL_3914 [Myc... 220 1e-55
gi|315441911|ref|YP_004074790.1| hypothetical protein Mspyr1_023... 218 3e-55
gi|145221126|ref|YP_001131804.1| hypothetical protein Mflv_0523 ... 218 6e-55
gi|120404783|ref|YP_954612.1| hypothetical protein Mvan_3825 [My... 216 2e-54
gi|108798673|ref|YP_638870.1| hypothetical protein Mmcs_1705 [My... 214 6e-54
gi|118463678|ref|YP_881288.1| hypothetical protein MAV_2072 [Myc... 213 2e-53
gi|41408204|ref|NP_961040.1| hypothetical protein MAP2106c [Myco... 212 3e-53
gi|108798503|ref|YP_638700.1| hypothetical protein Mmcs_1533 [My... 211 4e-53
gi|296171117|ref|ZP_06852570.1| conserved hypothetical protein [... 211 6e-53
gi|254774794|ref|ZP_05216310.1| hypothetical protein MaviaA2_089... 211 8e-53
gi|342857456|ref|ZP_08714112.1| hypothetical protein MCOL_01230 ... 210 9e-53
gi|315443758|ref|YP_004076637.1| hypothetical protein Mspyr1_214... 201 6e-50
gi|145223298|ref|YP_001133976.1| hypothetical protein Mflv_2711 ... 201 7e-50
gi|118470930|ref|YP_884768.1| hypothetical protein MSMEG_0355 [M... 196 2e-48
gi|126436679|ref|YP_001072370.1| hypothetical protein Mjls_4106 ... 188 5e-46
gi|118467247|ref|YP_881088.1| hypothetical protein MAV_1866 [Myc... 188 5e-46
gi|120401932|ref|YP_951761.1| hypothetical protein Mvan_0917 [My... 186 3e-45
gi|8920261|emb|CAB96433.1| hypothetical protein [Mycobacterium a... 171 5e-41
gi|213649445|ref|ZP_03379498.1| hypothetical protein SentesTy_20... 79.3 4e-13
gi|315502410|ref|YP_004081297.1| scp-like extracellular protein ... 60.5 2e-07
gi|302865865|ref|YP_003834502.1| SCP-like extracellular [Micromo... 60.1 2e-07
gi|118467036|ref|YP_879614.1| hypothetical protein MAV_0327 [Myc... 58.5 6e-07
gi|254773336|ref|ZP_05214852.1| hypothetical protein MaviaA2_014... 58.5 7e-07
gi|118619797|ref|YP_908129.1| hypothetical protein MUL_4732 [Myc... 56.6 3e-06
gi|159036825|ref|YP_001536078.1| SCP-like extracellular [Salinis... 54.3 1e-05
gi|330466269|ref|YP_004404012.1| Allergen V5/Tpx-1 family protei... 54.3 1e-05
gi|183980411|ref|YP_001848702.1| hypothetical protein MMAR_0380 ... 53.9 2e-05
gi|118463598|ref|YP_881106.1| hypothetical protein MAV_1886 [Myc... 53.9 2e-05
gi|342859994|ref|ZP_08716646.1| hypothetical protein MCOL_13980 ... 53.5 2e-05
gi|288917373|ref|ZP_06411740.1| SCP-like extracellular [Frankia ... 53.5 2e-05
gi|182434106|ref|YP_001821825.1| RNA polymerase ECF-subfamily si... 53.1 3e-05
gi|326774630|ref|ZP_08233895.1| putative RNA polymerase, sigma 7... 53.1 3e-05
gi|296167348|ref|ZP_06849750.1| conserved hypothetical protein [... 52.8 4e-05
gi|158314103|ref|YP_001506611.1| SCP-like extracellular protein ... 52.4 4e-05
gi|41406379|ref|NP_959215.1| hypothetical protein MAP0281 [Mycob... 52.0 5e-05
gi|284029267|ref|YP_003379198.1| SCP-like extracellular [Kribbel... 52.0 6e-05
gi|145221315|ref|YP_001131993.1| hypothetical protein Mflv_0720 ... 52.0 7e-05
gi|290958918|ref|YP_003490100.1| hypothetical protein SCAB_44921... 51.2 1e-04
gi|240168167|ref|ZP_04746826.1| hypothetical protein MkanA1_0255... 50.8 1e-04
>gi|15609112|ref|NP_216491.1| hypothetical protein Rv1975 [Mycobacterium tuberculosis H37Rv]
gi|15841450|ref|NP_336487.1| hypothetical protein MT2026 [Mycobacterium tuberculosis CDC1551]
gi|148661784|ref|YP_001283307.1| hypothetical protein MRA_1986 [Mycobacterium tuberculosis H37Ra]
49 more sequence titles
Length=221
Score = 449 bits (1156), Expect = 1e-124, Method: Compositional matrix adjust.
Identities = 221/221 (100%), Positives = 221/221 (100%), Gaps = 0/221 (0%)
Query 1 MSRRASATCALSATTAVAIMAAPAARADDKRLNDGVVANVYTVQRQAGCTNDVTINPQLQ 60
MSRRASATCALSATTAVAIMAAPAARADDKRLNDGVVANVYTVQRQAGCTNDVTINPQLQ
Sbjct 1 MSRRASATCALSATTAVAIMAAPAARADDKRLNDGVVANVYTVQRQAGCTNDVTINPQLQ 60
Query 61 LAAQWHTLDLLNNRHLNDDTGSDGSTPQDRAHAAGFRGKVAETVAINPAVAISGIELINQ 120
LAAQWHTLDLLNNRHLNDDTGSDGSTPQDRAHAAGFRGKVAETVAINPAVAISGIELINQ
Sbjct 61 LAAQWHTLDLLNNRHLNDDTGSDGSTPQDRAHAAGFRGKVAETVAINPAVAISGIELINQ 120
Query 121 WYYNPAFFAIMSDCANTQIGVWSENSPDRTVVVAVYGQPDRPSAMPPRGAVTGPPSPVAA 180
WYYNPAFFAIMSDCANTQIGVWSENSPDRTVVVAVYGQPDRPSAMPPRGAVTGPPSPVAA
Sbjct 121 WYYNPAFFAIMSDCANTQIGVWSENSPDRTVVVAVYGQPDRPSAMPPRGAVTGPPSPVAA 180
Query 181 QENVPIDPSPDYDASDEIEYGINWLPWILRGVYPPPAMPPQ 221
QENVPIDPSPDYDASDEIEYGINWLPWILRGVYPPPAMPPQ
Sbjct 181 QENVPIDPSPDYDASDEIEYGINWLPWILRGVYPPPAMPPQ 221
>gi|289443459|ref|ZP_06433203.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
gi|289570065|ref|ZP_06450292.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
gi|289754072|ref|ZP_06513450.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
gi|289416378|gb|EFD13618.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
gi|289543819|gb|EFD47467.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
gi|289694659|gb|EFD62088.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
Length=221
Score = 448 bits (1153), Expect = 2e-124, Method: Compositional matrix adjust.
Identities = 220/221 (99%), Positives = 221/221 (100%), Gaps = 0/221 (0%)
Query 1 MSRRASATCALSATTAVAIMAAPAARADDKRLNDGVVANVYTVQRQAGCTNDVTINPQLQ 60
MSRRASATCALSATTAVAIMAAPAARADDKRLNDGVVANVYTVQRQAGCTNDVTINPQLQ
Sbjct 1 MSRRASATCALSATTAVAIMAAPAARADDKRLNDGVVANVYTVQRQAGCTNDVTINPQLQ 60
Query 61 LAAQWHTLDLLNNRHLNDDTGSDGSTPQDRAHAAGFRGKVAETVAINPAVAISGIELINQ 120
LAAQWHTLDLLNNRHLNDDTGSDGSTPQDRAHAAGFRGKVAETVAINPAVAISGIELINQ
Sbjct 61 LAAQWHTLDLLNNRHLNDDTGSDGSTPQDRAHAAGFRGKVAETVAINPAVAISGIELINQ 120
Query 121 WYYNPAFFAIMSDCANTQIGVWSENSPDRTVVVAVYGQPDRPSAMPPRGAVTGPPSPVAA 180
WYYNPAFFAIMSDCANTQIGVWSEN+PDRTVVVAVYGQPDRPSAMPPRGAVTGPPSPVAA
Sbjct 121 WYYNPAFFAIMSDCANTQIGVWSENTPDRTVVVAVYGQPDRPSAMPPRGAVTGPPSPVAA 180
Query 181 QENVPIDPSPDYDASDEIEYGINWLPWILRGVYPPPAMPPQ 221
QENVPIDPSPDYDASDEIEYGINWLPWILRGVYPPPAMPPQ
Sbjct 181 QENVPIDPSPDYDASDEIEYGINWLPWILRGVYPPPAMPPQ 221
>gi|289447592|ref|ZP_06437336.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
gi|289420550|gb|EFD17751.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
Length=221
Score = 448 bits (1152), Expect = 3e-124, Method: Compositional matrix adjust.
Identities = 220/221 (99%), Positives = 220/221 (99%), Gaps = 0/221 (0%)
Query 1 MSRRASATCALSATTAVAIMAAPAARADDKRLNDGVVANVYTVQRQAGCTNDVTINPQLQ 60
MSRRASATCALSATTAVAIMAAPAARADDKRLNDGVVANVYTVQRQAGCTNDVTINPQLQ
Sbjct 1 MSRRASATCALSATTAVAIMAAPAARADDKRLNDGVVANVYTVQRQAGCTNDVTINPQLQ 60
Query 61 LAAQWHTLDLLNNRHLNDDTGSDGSTPQDRAHAAGFRGKVAETVAINPAVAISGIELINQ 120
LAAQWHTLDLLNNRHLNDDTGSDGSTPQDRAHAAGFRGKVAETVAINPAVAISGIELINQ
Sbjct 61 LAAQWHTLDLLNNRHLNDDTGSDGSTPQDRAHAAGFRGKVAETVAINPAVAISGIELINQ 120
Query 121 WYYNPAFFAIMSDCANTQIGVWSENSPDRTVVVAVYGQPDRPSAMPPRGAVTGPPSPVAA 180
WYYNP FFAIMSDCANTQIGVWSENSPDRTVVVAVYGQPDRPSAMPPRGAVTGPPSPVAA
Sbjct 121 WYYNPEFFAIMSDCANTQIGVWSENSPDRTVVVAVYGQPDRPSAMPPRGAVTGPPSPVAA 180
Query 181 QENVPIDPSPDYDASDEIEYGINWLPWILRGVYPPPAMPPQ 221
QENVPIDPSPDYDASDEIEYGINWLPWILRGVYPPPAMPPQ
Sbjct 181 QENVPIDPSPDYDASDEIEYGINWLPWILRGVYPPPAMPPQ 221
>gi|167970503|ref|ZP_02552780.1| hypothetical protein MtubH3_21718 [Mycobacterium tuberculosis
H37Ra]
gi|254364792|ref|ZP_04980838.1| conserved hypothetical protein [Mycobacterium tuberculosis str.
Haarlem]
gi|134150306|gb|EBA42351.1| conserved hypothetical protein [Mycobacterium tuberculosis str.
Haarlem]
Length=211
Score = 428 bits (1101), Expect = 2e-118, Method: Compositional matrix adjust.
Identities = 210/211 (99%), Positives = 211/211 (100%), Gaps = 0/211 (0%)
Query 11 LSATTAVAIMAAPAARADDKRLNDGVVANVYTVQRQAGCTNDVTINPQLQLAAQWHTLDL 70
+SATTAVAIMAAPAARADDKRLNDGVVANVYTVQRQAGCTNDVTINPQLQLAAQWHTLDL
Sbjct 1 MSATTAVAIMAAPAARADDKRLNDGVVANVYTVQRQAGCTNDVTINPQLQLAAQWHTLDL 60
Query 71 LNNRHLNDDTGSDGSTPQDRAHAAGFRGKVAETVAINPAVAISGIELINQWYYNPAFFAI 130
LNNRHLNDDTGSDGSTPQDRAHAAGFRGKVAETVAINPAVAISGIELINQWYYNPAFFAI
Sbjct 61 LNNRHLNDDTGSDGSTPQDRAHAAGFRGKVAETVAINPAVAISGIELINQWYYNPAFFAI 120
Query 131 MSDCANTQIGVWSENSPDRTVVVAVYGQPDRPSAMPPRGAVTGPPSPVAAQENVPIDPSP 190
MSDCANTQIGVWSENSPDRTVVVAVYGQPDRPSAMPPRGAVTGPPSPVAAQENVPIDPSP
Sbjct 121 MSDCANTQIGVWSENSPDRTVVVAVYGQPDRPSAMPPRGAVTGPPSPVAAQENVPIDPSP 180
Query 191 DYDASDEIEYGINWLPWILRGVYPPPAMPPQ 221
DYDASDEIEYGINWLPWILRGVYPPPAMPPQ
Sbjct 181 DYDASDEIEYGINWLPWILRGVYPPPAMPPQ 211
>gi|253798977|ref|YP_003031978.1| hypothetical protein TBMG_02015 [Mycobacterium tuberculosis KZN
1435]
gi|298525469|ref|ZP_07012878.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
gi|308403076|ref|ZP_07493714.2| hypothetical protein TMLG_01253 [Mycobacterium tuberculosis SUMu012]
gi|253320480|gb|ACT25083.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN
1435]
gi|298495263|gb|EFI30557.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
gi|308365780|gb|EFP54631.1| hypothetical protein TMLG_01253 [Mycobacterium tuberculosis SUMu012]
gi|323719462|gb|EGB28589.1| hypothetical protein TMMG_01236 [Mycobacterium tuberculosis CDC1551A]
Length=202
Score = 414 bits (1064), Expect = 5e-114, Method: Compositional matrix adjust.
Identities = 202/202 (100%), Positives = 202/202 (100%), Gaps = 0/202 (0%)
Query 20 MAAPAARADDKRLNDGVVANVYTVQRQAGCTNDVTINPQLQLAAQWHTLDLLNNRHLNDD 79
MAAPAARADDKRLNDGVVANVYTVQRQAGCTNDVTINPQLQLAAQWHTLDLLNNRHLNDD
Sbjct 1 MAAPAARADDKRLNDGVVANVYTVQRQAGCTNDVTINPQLQLAAQWHTLDLLNNRHLNDD 60
Query 80 TGSDGSTPQDRAHAAGFRGKVAETVAINPAVAISGIELINQWYYNPAFFAIMSDCANTQI 139
TGSDGSTPQDRAHAAGFRGKVAETVAINPAVAISGIELINQWYYNPAFFAIMSDCANTQI
Sbjct 61 TGSDGSTPQDRAHAAGFRGKVAETVAINPAVAISGIELINQWYYNPAFFAIMSDCANTQI 120
Query 140 GVWSENSPDRTVVVAVYGQPDRPSAMPPRGAVTGPPSPVAAQENVPIDPSPDYDASDEIE 199
GVWSENSPDRTVVVAVYGQPDRPSAMPPRGAVTGPPSPVAAQENVPIDPSPDYDASDEIE
Sbjct 121 GVWSENSPDRTVVVAVYGQPDRPSAMPPRGAVTGPPSPVAAQENVPIDPSPDYDASDEIE 180
Query 200 YGINWLPWILRGVYPPPAMPPQ 221
YGINWLPWILRGVYPPPAMPPQ
Sbjct 181 YGINWLPWILRGVYPPPAMPPQ 202
>gi|183982894|ref|YP_001851185.1| hypothetical protein MMAR_2890 [Mycobacterium marinum M]
gi|183176220|gb|ACC41330.1| conserved hypothetical secreted protein [Mycobacterium marinum
M]
Length=221
Score = 353 bits (906), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 174/221 (79%), Positives = 188/221 (86%), Gaps = 0/221 (0%)
Query 1 MSRRASATCALSATTAVAIMAAPAARADDKRLNDGVVANVYTVQRQAGCTNDVTINPQLQ 60
M R AL A + A + PAARAD+KRLNDG+VANVYTVQ QAGCTNDV INPQLQ
Sbjct 1 MRHRYLILSALVAMVSGAALGMPAARADNKRLNDGLVANVYTVQHQAGCTNDVRINPQLQ 60
Query 61 LAAQWHTLDLLNNRHLNDDTGSDGSTPQDRAHAAGFRGKVAETVAINPAVAISGIELINQ 120
LAAQWHTLD+LNNR L+ D GSDGS P DRA AAGF G+VAETVAINPA+AISG+EL+NQ
Sbjct 61 LAAQWHTLDVLNNRDLDGDIGSDGSAPSDRASAAGFHGQVAETVAINPALAISGVELLNQ 120
Query 121 WYYNPAFFAIMSDCANTQIGVWSENSPDRTVVVAVYGQPDRPSAMPPRGAVTGPPSPVAA 180
WYYNPA+FAIMSDCANT+IGVWSENSPDRTVVVA+YGQ DRP A PP A T PP PVA
Sbjct 121 WYYNPAYFAIMSDCANTEIGVWSENSPDRTVVVAMYGQLDRPVATPPVTAPTEPPPPVAL 180
Query 181 QENVPIDPSPDYDASDEIEYGINWLPWILRGVYPPPAMPPQ 221
ENVPIDPSPDYDASDEIEYGINWLPWILRGVYPPPAMPP+
Sbjct 181 PENVPIDPSPDYDASDEIEYGINWLPWILRGVYPPPAMPPE 221
>gi|254819933|ref|ZP_05224934.1| hypothetical protein MintA_08411 [Mycobacterium intracellulare
ATCC 13950]
Length=205
Score = 272 bits (695), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 141/213 (67%), Positives = 165/213 (78%), Gaps = 19/213 (8%)
Query 20 MAAPAARADD---------KRLNDGVVANVYTVQRQAGCTNDVTINPQLQLAAQWHTLDL 70
M++P A AD+ KRLND VVANV+TVQ QAGC NDV I+PQLQ AAQ HT DL
Sbjct 1 MSSPVAHADNDNNTLIPNNKRLNDSVVANVFTVQHQAGCNNDVRISPQLQAAAQRHTQDL 60
Query 71 LNNRHLNDDTGSDGSTPQDRAHAAGFRGKVAETVAINPAVAISGIELINQWYYNPAFFAI 130
LNNR L+ D GSDGS+PQDRA+AAGF G VAETVAIN ++AISG +LIN+WYYNP +F I
Sbjct 61 LNNRALDGDIGSDGSSPQDRANAAGFHGPVAETVAINQSIAISGNDLINRWYYNPDYFKI 120
Query 131 MSDCANTQIGVWSENSPDRTVVVAVYGQPD-RPSAMPPRGAVTGPPSPVAAQ-ENVPIDP 188
MS CAN+Q+GVWS NSPDRTVVVAVYGQP PS RGA +P+ +N+P+DP
Sbjct 121 MSSCANSQMGVWSLNSPDRTVVVAVYGQPQADPSG---RGA-----TPLNTDGQNIPLDP 172
Query 189 SPDYDASDEIEYGINWLPWILRGVYPPPAMPPQ 221
SPDYDASDE+++G+NW PWILRGVYPPP PPQ
Sbjct 173 SPDYDASDELQFGLNWFPWILRGVYPPPGNPPQ 205
>gi|118463096|ref|YP_881715.1| hypothetical protein MAV_2523 [Mycobacterium avium 104]
gi|118164383|gb|ABK65280.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=205
Score = 271 bits (692), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 140/213 (66%), Positives = 164/213 (77%), Gaps = 19/213 (8%)
Query 20 MAAPAARADD---------KRLNDGVVANVYTVQRQAGCTNDVTINPQLQLAAQWHTLDL 70
M P A AD+ KRLND VVANV+TVQ QAGC NDV I+PQLQ AAQ HT D+
Sbjct 1 MGVPVAHADNDNNTLIPNNKRLNDSVVANVFTVQHQAGCNNDVRISPQLQAAAQRHTQDV 60
Query 71 LNNRHLNDDTGSDGSTPQDRAHAAGFRGKVAETVAINPAVAISGIELINQWYYNPAFFAI 130
LNNR L+ D GSDGS+PQDRA+AAGF G VAETVAIN ++AISG +LIN+WYYNP +F I
Sbjct 61 LNNRALDGDIGSDGSSPQDRANAAGFHGPVAETVAINQSIAISGNDLINRWYYNPDYFKI 120
Query 131 MSDCANTQIGVWSENSPDRTVVVAVYGQPD-RPSAMPPRGAVTGPPSPVAAQ-ENVPIDP 188
MS CAN+Q+GVWS NSPDRTVVVAVYGQP PS RGA +P+ + +N+P+DP
Sbjct 121 MSSCANSQMGVWSLNSPDRTVVVAVYGQPQADPSG---RGA-----TPLNTEGQNIPLDP 172
Query 189 SPDYDASDEIEYGINWLPWILRGVYPPPAMPPQ 221
SPDYDASDE+++G+NW PWILRGVYPPP PPQ
Sbjct 173 SPDYDASDELQFGLNWFPWILRGVYPPPGNPPQ 205
>gi|342857620|ref|ZP_08714276.1| hypothetical protein MCOL_02050 [Mycobacterium colombiense CECT
3035]
gi|342134953|gb|EGT88119.1| hypothetical protein MCOL_02050 [Mycobacterium colombiense CECT
3035]
Length=196
Score = 264 bits (674), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 129/194 (67%), Positives = 156/194 (81%), Gaps = 11/194 (5%)
Query 28 DDKRLNDGVVANVYTVQRQAGCTNDVTINPQLQLAAQWHTLDLLNNRHLNDDTGSDGSTP 87
++KRLNDGV+AN+YT QRQAGCT+DV NPQLQLAA+ H DL+NNR L+ + GSDGS+P
Sbjct 14 NNKRLNDGVLANIYTAQRQAGCTHDVNSNPQLQLAARRHADDLMNNRALDGELGSDGSSP 73
Query 88 QDRAHAAGFRGKVAETVAINPAVAISGIELINQWYYNPAFFAIMSDCANTQIGVWSENSP 147
QDRA+AAG++GKVAETVAINPA+AI+G+E++NQWY NP + A MSDCA +Q+GVWSENS
Sbjct 74 QDRANAAGYQGKVAETVAINPALAINGVEIVNQWYGNPVYKATMSDCAYSQVGVWSENSL 133
Query 148 DRTVVVAVYGQPDRPSAMPPRGAVTGPPSPVAAQENVPIDPSPDYDASDEIEYGINWLPW 207
DR+V+VAVYGQP P A P +GP + IDPSPDYDASDE+E+G NW W
Sbjct 134 DRSVLVAVYGQP--PKAPPAVDLASGPSA---------IDPSPDYDASDELEFGTNWFAW 182
Query 208 ILRGVYPPPAMPPQ 221
ILRGVYPPPA PPQ
Sbjct 183 ILRGVYPPPAYPPQ 196
>gi|240170709|ref|ZP_04749368.1| hypothetical protein MkanA1_15445 [Mycobacterium kansasii ATCC
12478]
Length=152
Score = 229 bits (584), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 114/152 (75%), Positives = 128/152 (85%), Gaps = 2/152 (1%)
Query 19 IMAAPAARADDKRLNDGVVANVYTVQRQAGCTNDVTINPQLQLAAQWHTLDLLNNRHLND 78
+ A P A AD+KRLNDGVVANVYTVQ AGCTNDV IN QLQLAAQWHT+D+LNNR L+
Sbjct 2 LAATPPANADNKRLNDGVVANVYTVQHNAGCTNDVRINLQLQLAAQWHTVDVLNNRALDG 61
Query 79 DTGSDGSTPQDRAHAAGFRGKVAETVAINPAVAISGIELINQWYYNPAFFAIMSDCANTQ 138
D GSDGST QDRA AAG+RG VAETVAINPA+AISGIE+INQWYYNPA+ AIM +CA TQ
Sbjct 62 DLGSDGSTVQDRAIAAGYRGSVAETVAINPALAISGIEVINQWYYNPAYLAIMQNCAYTQ 121
Query 139 IGVWSENSPDRTVVVAVYGQPDRPSAMPPRGA 170
+GVWSENS DR+VVVAVYG P S+ PRG+
Sbjct 122 MGVWSENSLDRSVVVAVYGAPAEHSS--PRGS 151
>gi|120401585|ref|YP_951414.1| hypothetical protein Mvan_0567 [Mycobacterium vanbaalenii PYR-1]
gi|119954403|gb|ABM11408.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1]
Length=196
Score = 220 bits (561), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 102/142 (72%), Positives = 120/142 (85%), Gaps = 0/142 (0%)
Query 18 AIMAAPAARADDKRLNDGVVANVYTVQRQAGCTNDVTINPQLQLAAQWHTLDLLNNRHLN 77
A++ PAA D+KRLNDGVVANVYT+QRQAGC +D+ +P LQLAAQWH D L NR++N
Sbjct 54 ALLITPAAHGDNKRLNDGVVANVYTIQRQAGCVSDIKTSPSLQLAAQWHARDALTNRNVN 113
Query 78 DDTGSDGSTPQDRAHAAGFRGKVAETVAINPAVAISGIELINQWYYNPAFFAIMSDCANT 137
D GSDGSTPQ RA AAGF G V+ETVAINPA+A SGIELIN+WY++P FA+MSDC+NT
Sbjct 114 GDVGSDGSTPQQRAEAAGFSGAVSETVAINPALAFSGIELINRWYHDPVDFAVMSDCSNT 173
Query 138 QIGVWSENSPDRTVVVAVYGQP 159
+IGVWSENS DRTVVVAVYG+P
Sbjct 174 RIGVWSENSVDRTVVVAVYGKP 195
>gi|118619124|ref|YP_907456.1| hypothetical protein MUL_3914 [Mycobacterium ulcerans Agy99]
gi|183984019|ref|YP_001852310.1| hypothetical protein MMAR_4048 [Mycobacterium marinum M]
gi|118571234|gb|ABL05985.1| conserved secreted protein [Mycobacterium ulcerans Agy99]
gi|183177345|gb|ACC42455.1| conserved secreted protein [Mycobacterium marinum M]
Length=166
Score = 220 bits (561), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 107/147 (73%), Positives = 122/147 (83%), Gaps = 0/147 (0%)
Query 13 ATTAVAIMAAPAARADDKRLNDGVVANVYTVQRQAGCTNDVTINPQLQLAAQWHTLDLLN 72
A + A+ APAA AD+KRLNDGVVANVYT+Q QAGCT+++ I+P+LQLAA+WHT D+L
Sbjct 19 ALLSAALSTAPAAHADNKRLNDGVVANVYTIQHQAGCTSELRIDPRLQLAAEWHTNDVLG 78
Query 73 NRHLNDDTGSDGSTPQDRAHAAGFRGKVAETVAINPAVAISGIELINQWYYNPAFFAIMS 132
NR L+ D GSDGSTP DRA AAGFRG VAETVAINPA+AISG+ELINQWY NP + AIM
Sbjct 79 NRALDGDIGSDGSTPSDRAAAAGFRGDVAETVAINPALAISGVELINQWYNNPDYLAIMR 138
Query 133 DCANTQIGVWSENSPDRTVVVAVYGQP 159
DC T IGVWSENS DRTVVVAVYG P
Sbjct 139 DCKYTAIGVWSENSLDRTVVVAVYGSP 165
>gi|315441911|ref|YP_004074790.1| hypothetical protein Mspyr1_02360 [Mycobacterium sp. Spyr1]
gi|315260214|gb|ADT96955.1| hypothetical protein Mspyr1_02360 [Mycobacterium sp. Spyr1]
Length=171
Score = 218 bits (556), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 102/142 (72%), Positives = 119/142 (84%), Gaps = 0/142 (0%)
Query 18 AIMAAPAARADDKRLNDGVVANVYTVQRQAGCTNDVTINPQLQLAAQWHTLDLLNNRHLN 77
A++ PAA D+KRLNDGVVANVYT+QRQAGC +D+ I+P LQLAAQWH D L NR++N
Sbjct 29 ALLITPAAHGDNKRLNDGVVANVYTIQRQAGCVSDIKISPSLQLAAQWHARDALTNRNVN 88
Query 78 DDTGSDGSTPQDRAHAAGFRGKVAETVAINPAVAISGIELINQWYYNPAFFAIMSDCANT 137
D GSDGST Q RA AAGF G V+ETVAINPA+A SGIELINQWY++P A+MSDC+NT
Sbjct 89 GDVGSDGSTLQQRAEAAGFSGAVSETVAINPALAFSGIELINQWYHDPVDLAVMSDCSNT 148
Query 138 QIGVWSENSPDRTVVVAVYGQP 159
+IGVWSENS DRTVVVAVYG+P
Sbjct 149 RIGVWSENSVDRTVVVAVYGKP 170
>gi|145221126|ref|YP_001131804.1| hypothetical protein Mflv_0523 [Mycobacterium gilvum PYR-GCK]
gi|145213612|gb|ABP43016.1| conserved hypothetical protein [Mycobacterium gilvum PYR-GCK]
Length=197
Score = 218 bits (555), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 102/142 (72%), Positives = 119/142 (84%), Gaps = 0/142 (0%)
Query 18 AIMAAPAARADDKRLNDGVVANVYTVQRQAGCTNDVTINPQLQLAAQWHTLDLLNNRHLN 77
A++ PAA D+KRLNDGVVANVYT+QRQAGC +D+ I+P LQLAAQWH D L NR++N
Sbjct 55 ALLITPAAHGDNKRLNDGVVANVYTIQRQAGCVSDIKISPSLQLAAQWHARDALTNRNVN 114
Query 78 DDTGSDGSTPQDRAHAAGFRGKVAETVAINPAVAISGIELINQWYYNPAFFAIMSDCANT 137
D GSDGST Q RA AAGF G V+ETVAINPA+A SGIELINQWY++P A+MSDC+NT
Sbjct 115 GDVGSDGSTLQQRAEAAGFSGAVSETVAINPALAFSGIELINQWYHDPVDLAVMSDCSNT 174
Query 138 QIGVWSENSPDRTVVVAVYGQP 159
+IGVWSENS DRTVVVAVYG+P
Sbjct 175 RIGVWSENSVDRTVVVAVYGKP 196
>gi|120404783|ref|YP_954612.1| hypothetical protein Mvan_3825 [Mycobacterium vanbaalenii PYR-1]
gi|119957601|gb|ABM14606.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1]
Length=161
Score = 216 bits (549), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 100/141 (71%), Positives = 119/141 (85%), Gaps = 0/141 (0%)
Query 19 IMAAPAARADDKRLNDGVVANVYTVQRQAGCTNDVTINPQLQLAAQWHTLDLLNNRHLND 78
+ PAA+AD++RLN+ V NVYT+Q+ +GCT D+ INPQLQLAAQWHT D+L+NR L
Sbjct 20 VAGTPAAQADNRRLNESVAVNVYTIQQNSGCTTDLKINPQLQLAAQWHTNDVLHNRALGG 79
Query 79 DTGSDGSTPQDRAHAAGFRGKVAETVAINPAVAISGIELINQWYYNPAFFAIMSDCANTQ 138
D GSDGST QDRA+ AGF G VAETVAINPA+AISG+E++NQWYY P + AIMS+CANTQ
Sbjct 80 DIGSDGSTAQDRANKAGFVGTVAETVAINPALAISGVEIMNQWYYRPDYMAIMSNCANTQ 139
Query 139 IGVWSENSPDRTVVVAVYGQP 159
IGVWSENS DR+VVVAVYGQP
Sbjct 140 IGVWSENSLDRSVVVAVYGQP 160
>gi|108798673|ref|YP_638870.1| hypothetical protein Mmcs_1705 [Mycobacterium sp. MCS]
gi|119867773|ref|YP_937725.1| hypothetical protein Mkms_1733 [Mycobacterium sp. KMS]
gi|119867789|ref|YP_937741.1| hypothetical protein Mkms_1749 [Mycobacterium sp. KMS]
gi|126434273|ref|YP_001069964.1| hypothetical protein Mjls_1683 [Mycobacterium sp. JLS]
gi|108769092|gb|ABG07814.1| hypothetical protein Mmcs_1705 [Mycobacterium sp. MCS]
gi|119693862|gb|ABL90935.1| conserved hypothetical protein [Mycobacterium sp. KMS]
gi|119693878|gb|ABL90951.1| conserved hypothetical protein [Mycobacterium sp. KMS]
gi|126234073|gb|ABN97473.1| conserved hypothetical protein [Mycobacterium sp. JLS]
Length=197
Score = 214 bits (546), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 101/142 (72%), Positives = 118/142 (84%), Gaps = 0/142 (0%)
Query 18 AIMAAPAARADDKRLNDGVVANVYTVQRQAGCTNDVTINPQLQLAAQWHTLDLLNNRHLN 77
A++ PAA D+KRLNDGVVANVYT+QRQAGC +D+ I+P LQLAAQWH D L NR++N
Sbjct 55 ALLITPAAHGDNKRLNDGVVANVYTIQRQAGCVSDIKISPSLQLAAQWHARDALTNRNVN 114
Query 78 DDTGSDGSTPQDRAHAAGFRGKVAETVAINPAVAISGIELINQWYYNPAFFAIMSDCANT 137
D GSD ST Q RA AAGF G V+ETVAINPA+A SGIELINQWY++P A+MSDC+NT
Sbjct 115 GDVGSDVSTLQQRAEAAGFSGAVSETVAINPALAFSGIELINQWYHDPVDLAVMSDCSNT 174
Query 138 QIGVWSENSPDRTVVVAVYGQP 159
+IGVWSENS DRTVVVAVYG+P
Sbjct 175 RIGVWSENSVDRTVVVAVYGKP 196
>gi|118463678|ref|YP_881288.1| hypothetical protein MAV_2072 [Mycobacterium avium 104]
gi|118164965|gb|ABK65862.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=166
Score = 213 bits (541), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 103/148 (70%), Positives = 119/148 (81%), Gaps = 0/148 (0%)
Query 13 ATTAVAIMAAPAARADDKRLNDGVVANVYTVQRQAGCTNDVTINPQLQLAAQWHTLDLLN 72
A A + PAA AD+KRLN VV+ VYT+Q QAGCTNDV N L LAA+WH D++N
Sbjct 15 AVVVSAALPVPAAHADNKRLNSAVVSAVYTLQHQAGCTNDVVRNNALTLAAEWHAEDMIN 74
Query 73 NRHLNDDTGSDGSTPQDRAHAAGFRGKVAETVAINPAVAISGIELINQWYYNPAFFAIMS 132
NR++NDD GSDGSTPQDRA+AAGFRG+ AETVAINPA+AIS +EL+NQWY NP AI+
Sbjct 75 NRNINDDIGSDGSTPQDRANAAGFRGRAAETVAINPAMAISSLELVNQWYANPDDMAIIR 134
Query 133 DCANTQIGVWSENSPDRTVVVAVYGQPD 160
DCANT IGVWS+NS DRTVVVAVYGQPD
Sbjct 135 DCANTSIGVWSDNSLDRTVVVAVYGQPD 162
>gi|41408204|ref|NP_961040.1| hypothetical protein MAP2106c [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41396559|gb|AAS04423.1| hypothetical protein MAP_2106c [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|336461721|gb|EGO40583.1| hypothetical protein MAPs_28120 [Mycobacterium avium subsp. paratuberculosis
S397]
Length=155
Score = 212 bits (540), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 103/148 (70%), Positives = 119/148 (81%), Gaps = 0/148 (0%)
Query 13 ATTAVAIMAAPAARADDKRLNDGVVANVYTVQRQAGCTNDVTINPQLQLAAQWHTLDLLN 72
A A + PAA AD+KRLN VV+ VYT+Q QAGCTNDV N L LAA+WH D++N
Sbjct 4 AVVVSAALPVPAAHADNKRLNSAVVSAVYTLQHQAGCTNDVVRNNALTLAAEWHAEDMIN 63
Query 73 NRHLNDDTGSDGSTPQDRAHAAGFRGKVAETVAINPAVAISGIELINQWYYNPAFFAIMS 132
NR++NDD GSDGSTPQDRA+AAGFRG+ AETVAINPA+AIS +EL+NQWY NP AI+
Sbjct 64 NRNINDDIGSDGSTPQDRANAAGFRGRAAETVAINPAMAISSLELVNQWYANPDDMAIIR 123
Query 133 DCANTQIGVWSENSPDRTVVVAVYGQPD 160
DCANT IGVWS+NS DRTVVVAVYGQPD
Sbjct 124 DCANTSIGVWSDNSLDRTVVVAVYGQPD 151
>gi|108798503|ref|YP_638700.1| hypothetical protein Mmcs_1533 [Mycobacterium sp. MCS]
gi|119867603|ref|YP_937555.1| hypothetical protein Mkms_1556 [Mycobacterium sp. KMS]
gi|108768922|gb|ABG07644.1| conserved hypothetical protein [Mycobacterium sp. MCS]
gi|119693692|gb|ABL90765.1| conserved hypothetical protein [Mycobacterium sp. KMS]
Length=166
Score = 211 bits (538), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 98/133 (74%), Positives = 113/133 (85%), Gaps = 0/133 (0%)
Query 28 DDKRLNDGVVANVYTVQRQAGCTNDVTINPQLQLAAQWHTLDLLNNRHLNDDTGSDGSTP 87
D++R N VV NVYTVQRQAGCTND+ ++PQL LAA+WH DL+ NR L DTGSDGSTP
Sbjct 34 DNRRFNSSVVQNVYTVQRQAGCTNDLNVSPQLLLAAEWHAKDLMGNRSLGGDTGSDGSTP 93
Query 88 QDRAHAAGFRGKVAETVAINPAVAISGIELINQWYYNPAFFAIMSDCANTQIGVWSENSP 147
Q RA AAGFRG VAET+AI+PA+AISGIELIN WY+NPA+ AIMSDC T++GVWSENS
Sbjct 94 QQRAEAAGFRGGVAETIAIHPALAISGIELINLWYHNPAYHAIMSDCGFTKMGVWSENSL 153
Query 148 DRTVVVAVYGQPD 160
DRTVVVAVYG+PD
Sbjct 154 DRTVVVAVYGRPD 166
>gi|296171117|ref|ZP_06852570.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295894373|gb|EFG74126.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=164
Score = 211 bits (537), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 105/142 (74%), Positives = 119/142 (84%), Gaps = 1/142 (0%)
Query 18 AIMAAPAARADDKRLNDGVVANVYTVQRQAGCTNDVTINPQLQLAAQWHTLDLLNNRHLN 77
A+ APA AD+KRLNDGVVANVYTVQ AGCTNDV INPQLQLAAQWHT D+L NR L+
Sbjct 18 ALACAPA-NADNKRLNDGVVANVYTVQHNAGCTNDVRINPQLQLAAQWHTDDVLVNRSLD 76
Query 78 DDTGSDGSTPQDRAHAAGFRGKVAETVAINPAVAISGIELINQWYYNPAFFAIMSDCANT 137
D GSDGSTPQDRA+AAG+ G AETVAINPA+AISG+E+I QWY NP + AIM +CA T
Sbjct 77 GDIGSDGSTPQDRANAAGYTGSAAETVAINPALAISGLEVIQQWYDNPGYLAIMRNCAYT 136
Query 138 QIGVWSENSPDRTVVVAVYGQP 159
Q+GVWSENS DR+VVVA+YG P
Sbjct 137 QMGVWSENSLDRSVVVAMYGAP 158
>gi|254774794|ref|ZP_05216310.1| hypothetical protein MaviaA2_08995 [Mycobacterium avium subsp.
avium ATCC 25291]
Length=162
Score = 211 bits (536), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 102/148 (69%), Positives = 118/148 (80%), Gaps = 0/148 (0%)
Query 13 ATTAVAIMAAPAARADDKRLNDGVVANVYTVQRQAGCTNDVTINPQLQLAAQWHTLDLLN 72
A A + PAA AD+KRLN VV+ VYT+Q AGCTNDV N L LAA+WH D++N
Sbjct 11 AVVVSAALPVPAAHADNKRLNSAVVSAVYTLQHHAGCTNDVVRNNALTLAAEWHAEDMIN 70
Query 73 NRHLNDDTGSDGSTPQDRAHAAGFRGKVAETVAINPAVAISGIELINQWYYNPAFFAIMS 132
NR++NDD GSDGSTPQDRA+AAGFRG+ AETVAINPA+AIS +EL+NQWY NP AI+
Sbjct 71 NRNINDDIGSDGSTPQDRANAAGFRGRAAETVAINPAMAISSLELVNQWYANPDDMAIIR 130
Query 133 DCANTQIGVWSENSPDRTVVVAVYGQPD 160
DCANT IGVWS+NS DRTVVVAVYGQPD
Sbjct 131 DCANTSIGVWSDNSLDRTVVVAVYGQPD 158
>gi|342857456|ref|ZP_08714112.1| hypothetical protein MCOL_01230 [Mycobacterium colombiense CECT
3035]
gi|342134789|gb|EGT87955.1| hypothetical protein MCOL_01230 [Mycobacterium colombiense CECT
3035]
Length=171
Score = 210 bits (535), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 98/136 (73%), Positives = 115/136 (85%), Gaps = 0/136 (0%)
Query 28 DDKRLNDGVVANVYTVQRQAGCTNDVTINPQLQLAAQWHTLDLLNNRHLNDDTGSDGSTP 87
D+KRLN VV+ VYT+Q QAGCTNDV N L LAA+WH D++NNR++NDD GSDGSTP
Sbjct 35 DNKRLNSAVVSAVYTLQHQAGCTNDVIRNNALTLAAEWHAEDMINNRNINDDIGSDGSTP 94
Query 88 QDRAHAAGFRGKVAETVAINPAVAISGIELINQWYYNPAFFAIMSDCANTQIGVWSENSP 147
QDRA+AAGFRG+ AETVAINPA+AIS +EL+NQWY+NP AI+ DCANT IGVWS+NS
Sbjct 95 QDRANAAGFRGRAAETVAINPAIAISSLELVNQWYHNPDDMAIIRDCANTAIGVWSDNSM 154
Query 148 DRTVVVAVYGQPDRPS 163
DRTVVVAVYGQPD+P
Sbjct 155 DRTVVVAVYGQPDQPK 170
>gi|315443758|ref|YP_004076637.1| hypothetical protein Mspyr1_21480 [Mycobacterium sp. Spyr1]
gi|315262061|gb|ADT98802.1| hypothetical protein Mspyr1_21480 [Mycobacterium sp. Spyr1]
Length=159
Score = 201 bits (511), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 93/132 (71%), Positives = 110/132 (84%), Gaps = 0/132 (0%)
Query 28 DDKRLNDGVVANVYTVQRQAGCTNDVTINPQLQLAAQWHTLDLLNNRHLNDDTGSDGSTP 87
D++RLN+ VV NVYT+Q + GC ++ INPQLQLAAQWH D+L NR LN D GSDGSTP
Sbjct 27 DNRRLNESVVVNVYTIQHKHGCQTEIKINPQLQLAAQWHANDVLRNRALNGDIGSDGSTP 86
Query 88 QDRAHAAGFRGKVAETVAINPAVAISGIELINQWYYNPAFFAIMSDCANTQIGVWSENSP 147
Q RA+ AGF G +ETVAINPA+AISGIE++NQWYY P + AIMS+CANT+IGVWSENS
Sbjct 87 QVRANNAGFVGTASETVAINPALAISGIEILNQWYYRPDYMAIMSNCANTEIGVWSENSL 146
Query 148 DRTVVVAVYGQP 159
DR+VVVAVYGQP
Sbjct 147 DRSVVVAVYGQP 158
>gi|145223298|ref|YP_001133976.1| hypothetical protein Mflv_2711 [Mycobacterium gilvum PYR-GCK]
gi|145215784|gb|ABP45188.1| conserved hypothetical protein [Mycobacterium gilvum PYR-GCK]
Length=162
Score = 201 bits (511), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 93/132 (71%), Positives = 110/132 (84%), Gaps = 0/132 (0%)
Query 28 DDKRLNDGVVANVYTVQRQAGCTNDVTINPQLQLAAQWHTLDLLNNRHLNDDTGSDGSTP 87
D++RLN+ VV NVYT+Q + GC ++ INPQLQLAAQWH D+L NR LN D GSDGSTP
Sbjct 30 DNRRLNESVVVNVYTIQHKHGCQTEIKINPQLQLAAQWHANDVLRNRALNGDIGSDGSTP 89
Query 88 QDRAHAAGFRGKVAETVAINPAVAISGIELINQWYYNPAFFAIMSDCANTQIGVWSENSP 147
Q RA+ AGF G +ETVAINPA+AISGIE++NQWYY P + AIMS+CANT+IGVWSENS
Sbjct 90 QVRANNAGFVGTASETVAINPALAISGIEILNQWYYRPDYMAIMSNCANTEIGVWSENSL 149
Query 148 DRTVVVAVYGQP 159
DR+VVVAVYGQP
Sbjct 150 DRSVVVAVYGQP 161
>gi|118470930|ref|YP_884768.1| hypothetical protein MSMEG_0355 [Mycobacterium smegmatis str.
MC2 155]
gi|118172217|gb|ABK73113.1| conserved hypothetical protein [Mycobacterium smegmatis str.
MC2 155]
Length=164
Score = 196 bits (497), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 94/160 (59%), Positives = 125/160 (79%), Gaps = 0/160 (0%)
Query 1 MSRRASATCALSATTAVAIMAAPAARADDKRLNDGVVANVYTVQRQAGCTNDVTINPQLQ 60
+++R+ A TA A+ AP A AD++RLN VV+NVYTVQRQAGCT+++T++P+L
Sbjct 4 IAQRSVVLVACGVLTAGAVSHAPDAAADNRRLNSSVVSNVYTVQRQAGCTDNITVDPRLL 63
Query 61 LAAQWHTLDLLNNRHLNDDTGSDGSTPQDRAHAAGFRGKVAETVAINPAVAISGIELINQ 120
AA+ HTLD+LNNR L+ D GSDGSTPQ RA A F G+VAETVA+NPA+AI+ +++INQ
Sbjct 64 EAARRHTLDVLNNRSLDGDIGSDGSTPQVRASNADFYGRVAETVAVNPALAINNLDVINQ 123
Query 121 WYYNPAFFAIMSDCANTQIGVWSENSPDRTVVVAVYGQPD 160
WY+ P + AIM DC T++GVWSENS DR+V+VAVYG P+
Sbjct 124 WYHRPDYLAIMRDCGFTRMGVWSENSLDRSVLVAVYGSPE 163
>gi|126436679|ref|YP_001072370.1| hypothetical protein Mjls_4106 [Mycobacterium sp. JLS]
gi|126236479|gb|ABN99879.1| conserved hypothetical protein [Mycobacterium sp. JLS]
Length=168
Score = 188 bits (477), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 89/144 (62%), Positives = 117/144 (82%), Gaps = 0/144 (0%)
Query 19 IMAAPAARADDKRLNDGVVANVYTVQRQAGCTNDVTINPQLQLAAQWHTLDLLNNRHLND 78
++AAP+A+AD++RLN+ V +N+++ Q GCT D + +L AA+ HTLD+ NR++N
Sbjct 24 VLAAPSAQADNRRLNESVYSNIFSAQSINGCTTDPKRDRRLDEAARRHTLDVRANRNING 83
Query 79 DTGSDGSTPQDRAHAAGFRGKVAETVAINPAVAISGIELINQWYYNPAFFAIMSDCANTQ 138
D GSDGSTPQDRA+AAGF GKV+ET+AINPA+AISG+E++NQW++NP +IM DC+NT
Sbjct 84 DIGSDGSTPQDRANAAGFVGKVSETIAINPALAISGLEVLNQWWHNPVSRSIMQDCSNTA 143
Query 139 IGVWSENSPDRTVVVAVYGQPDRP 162
IGVWSENS DRTVVVAVYGQP P
Sbjct 144 IGVWSENSLDRTVVVAVYGQPGTP 167
>gi|118467247|ref|YP_881088.1| hypothetical protein MAV_1866 [Mycobacterium avium 104]
gi|118168534|gb|ABK69431.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=155
Score = 188 bits (477), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 91/140 (65%), Positives = 113/140 (81%), Gaps = 0/140 (0%)
Query 20 MAAPAARADDKRLNDGVVANVYTVQRQAGCTNDVTINPQLQLAAQWHTLDLLNNRHLNDD 79
+A P+A AD+KRLN+ V N+YT Q Q GC + ++ +L AA+ HTLD+L+NR L D
Sbjct 15 IAVPSANADNKRLNESVFVNIYTAQAQNGCPGEPHLDGRLVEAARVHTLDVLHNRTLGGD 74
Query 80 TGSDGSTPQDRAHAAGFRGKVAETVAINPAVAISGIELINQWYYNPAFFAIMSDCANTQI 139
GSDGSTPQDRA+ AGF GK +ETVAINPA+AISGIE++NQW++NPA+ AIM DC+NT I
Sbjct 75 IGSDGSTPQDRANRAGFVGKASETVAINPALAISGIEILNQWWHNPAYQAIMRDCSNTAI 134
Query 140 GVWSENSPDRTVVVAVYGQP 159
GVWSENS DR+VVVAVYGQP
Sbjct 135 GVWSENSLDRSVVVAVYGQP 154
>gi|120401932|ref|YP_951761.1| hypothetical protein Mvan_0917 [Mycobacterium vanbaalenii PYR-1]
gi|119954750|gb|ABM11755.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1]
Length=172
Score = 186 bits (471), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 97/153 (64%), Positives = 113/153 (74%), Gaps = 0/153 (0%)
Query 7 ATCALSATTAVAIMAAPAARADDKRLNDGVVANVYTVQRQAGCTNDVTINPQLQLAAQWH 66
A AL + P A AD+ RLN VV V VQ +AGC N + INPQLQLAAQWH
Sbjct 19 AIAALVIPVVATALVVPHAHADNNRLNRSVVQMVSVVQYRAGCHNHLKINPQLQLAAQWH 78
Query 67 TLDLLNNRHLNDDTGSDGSTPQDRAHAAGFRGKVAETVAINPAVAISGIELINQWYYNPA 126
TLD+LNN L DTG+DGS PQDRA+AAGFRGKV ETVA++PA+AISG+ELIN WY++
Sbjct 79 TLDVLNNPVLLGDTGTDGSGPQDRANAAGFRGKVEETVAVHPALAISGLELINAWYHDAD 138
Query 127 FFAIMSDCANTQIGVWSENSPDRTVVVAVYGQP 159
+M +CANT+IGVWSEN DRTVVVAVYGQP
Sbjct 139 LLGVMRNCANTEIGVWSENRIDRTVVVAVYGQP 171
>gi|8920261|emb|CAB96433.1| hypothetical protein [Mycobacterium avium subsp. paratuberculosis]
Length=193
Score = 171 bits (434), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 85/125 (68%), Positives = 100/125 (80%), Gaps = 3/125 (2%)
Query 16 AVAIMAA---PAARADDKRLNDGVVANVYTVQRQAGCTNDVTINPQLQLAAQWHTLDLLN 72
AV + AA PAA AD+KRLN VV+ VYT+Q QAGCTNDV N L LAA+WH D++N
Sbjct 4 AVVVSAALPVPAAHADNKRLNSAVVSAVYTLQHQAGCTNDVVRNNALTLAAEWHAEDMIN 63
Query 73 NRHLNDDTGSDGSTPQDRAHAAGFRGKVAETVAINPAVAISGIELINQWYYNPAFFAIMS 132
NR++NDD GSDGSTPQDRA+AAGFRG+ AETVAINPA+AIS +EL+NQWY NP AI+
Sbjct 64 NRNINDDIGSDGSTPQDRANAAGFRGRAAETVAINPAMAISSLELVNQWYANPDDMAIIR 123
Query 133 DCANT 137
DCANT
Sbjct 124 DCANT 128
>gi|213649445|ref|ZP_03379498.1| hypothetical protein SentesTy_20412 [Salmonella enterica subsp.
enterica serovar Typhi str. J185]
Length=37
Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/37 (100%), Positives = 37/37 (100%), Gaps = 0/37 (0%)
Query 128 FAIMSDCANTQIGVWSENSPDRTVVVAVYGQPDRPSA 164
FAIMSDCANTQIGVWSENSPDRTVVVAVYGQPDRPSA
Sbjct 1 FAIMSDCANTQIGVWSENSPDRTVVVAVYGQPDRPSA 37
>gi|315502410|ref|YP_004081297.1| scp-like extracellular protein [Micromonospora sp. L5]
gi|315409029|gb|ADU07146.1| SCP-like extracellular protein [Micromonospora sp. L5]
Length=400
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/110 (40%), Positives = 60/110 (55%), Gaps = 12/110 (10%)
Query 36 VVANVYTVQRQAGCTNDVTINPQLQLAAQWHTLDLLNNRHLNDDTGSDGSTPQDRAHAAG 95
VV V + +AGC +T+N +L LAAQ H+ D +++ + D TGSDGS P DR AAG
Sbjct 281 VVTIVNQERAKAGC-KALTVNAKLNLAAQRHSQDQADHKKM-DHTGSDGSQPWDRVKAAG 338
Query 96 FRGK-VAETVAIN---PAVAISGIELINQWYYNPAFFAIMSDCANTQIGV 141
+ + V E VA N PA + G W + + +C+ TQIGV
Sbjct 339 YSYRMVGENVAWNYQTPAAVMEG------WMNSEGHRKNILNCSYTQIGV 382
>gi|302865865|ref|YP_003834502.1| SCP-like extracellular [Micromonospora aurantiaca ATCC 27029]
gi|302568724|gb|ADL44926.1| SCP-like extracellular [Micromonospora aurantiaca ATCC 27029]
Length=400
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/110 (40%), Positives = 60/110 (55%), Gaps = 12/110 (10%)
Query 36 VVANVYTVQRQAGCTNDVTINPQLQLAAQWHTLDLLNNRHLNDDTGSDGSTPQDRAHAAG 95
VV V + +AGC +T+N +L LAAQ H+ D +++ + D TGSDGS P DR AAG
Sbjct 281 VVTIVNQERAKAGC-KALTVNAKLNLAAQRHSQDQADHKKM-DHTGSDGSQPWDRVKAAG 338
Query 96 FRGK-VAETVAIN---PAVAISGIELINQWYYNPAFFAIMSDCANTQIGV 141
+ + V E VA N PA + G W + + +C+ TQIGV
Sbjct 339 YAYRMVGENVAWNYQTPAAVMEG------WMNSEGHRKNILNCSYTQIGV 382
>gi|118467036|ref|YP_879614.1| hypothetical protein MAV_0327 [Mycobacterium avium 104]
gi|118168323|gb|ABK69220.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=157
Score = 58.5 bits (140), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/161 (32%), Positives = 74/161 (46%), Gaps = 12/161 (7%)
Query 1 MSRRASATCALSATTAV----AIMAAPAARADDKRLNDGVVANVYTVQRQAGCTNDVTIN 56
M+R+A + TA AARADD GV+ N RQA + +
Sbjct 1 MTRKAEIVAVFAICTAFMTASGAFGGFAARADDP----GVLYNGINQLRQA--CGPIAED 54
Query 57 PQLQLAAQWHTLDLLNNRHLNDDTGSDGSTPQDRAHAAGFRGKVA-ETVAINPAVAISGI 115
P+L AAQ H D+L N +N GSDGS+PQ R AAG+R + + E V A +
Sbjct 55 PRLTEAAQQHADDMLRN-GVNGHIGSDGSSPQARIAAAGYRSRYSGEIVFWATGSAATPG 113
Query 116 ELINQWYYNPAFFAIMSDCANTQIGVWSENSPDRTVVVAVY 156
E ++ W +P AI+ +C T G + ++ V +
Sbjct 114 EALDMWMQSPPHRAIILNCGFTAGGFATARDGNKMTAVGDF 154
>gi|254773336|ref|ZP_05214852.1| hypothetical protein MaviaA2_01441 [Mycobacterium avium subsp.
avium ATCC 25291]
Length=157
Score = 58.5 bits (140), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/161 (32%), Positives = 74/161 (46%), Gaps = 12/161 (7%)
Query 1 MSRRASATCALSATTAV----AIMAAPAARADDKRLNDGVVANVYTVQRQAGCTNDVTIN 56
M+R+A + TA AARADD GV+ N RQA + +
Sbjct 1 MTRKAEIAAVFAICTAFMTASGAFGGIAARADDP----GVLYNGINQLRQA--CGPIAED 54
Query 57 PQLQLAAQWHTLDLLNNRHLNDDTGSDGSTPQDRAHAAGFRGKVA-ETVAINPAVAISGI 115
P+L AAQ H D+L N +N GSDGS+PQ R AAG+R + + E V A +
Sbjct 55 PRLTEAAQQHADDMLRN-GVNGHIGSDGSSPQARIAAAGYRSRYSGEIVFWATGSAATPG 113
Query 116 ELINQWYYNPAFFAIMSDCANTQIGVWSENSPDRTVVVAVY 156
E ++ W +P AI+ +C T G + ++ V +
Sbjct 114 EALDMWMQSPPHRAIILNCGFTAGGFATARDGNKMTAVGDF 154
>gi|118619797|ref|YP_908129.1| hypothetical protein MUL_4732 [Mycobacterium ulcerans Agy99]
gi|118571907|gb|ABL06658.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99]
Length=105
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/40 (68%), Positives = 30/40 (75%), Gaps = 5/40 (12%)
Query 186 IDPSPDYDASDEIEYGINWLPWILRGV-----YPPPAMPP 220
+DPSPDYDASDEIE+ N+L W LRGV YPPPA PP
Sbjct 65 MDPSPDYDASDEIEFFFNYLTWGLRGVSDGNGYPPPAYPP 104
>gi|159036825|ref|YP_001536078.1| SCP-like extracellular [Salinispora arenicola CNS-205]
gi|157915660|gb|ABV97087.1| SCP-like extracellular [Salinispora arenicola CNS-205]
Length=465
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/123 (36%), Positives = 66/123 (54%), Gaps = 8/123 (6%)
Query 36 VVANVYTVQRQAGCTNDVTINPQLQLAAQWHTLDLLNNRHLNDDTGSDGSTPQDRAHAAG 95
VV+ V + +AGC ++++ +L AAQ H+ D +N+ + TGS+GST DR A G
Sbjct 346 VVSLVNAERAKAGC-KALSVDDKLMTAAQRHSQDQADNKKMTH-TGSNGSTLGDRVKAVG 403
Query 96 FRGKVA-ETVAINPAVAISGIELINQWYYNPAFFAIMSDCANTQIGVW--SENSPDRTVV 152
+R + A E VA N S ++N W + A + +C+ T+IGV S N P T V
Sbjct 404 YRFRAAGENVAWN---QQSPEAVMNAWMNSSGHRANILNCSFTEIGVGIASSNGPYWTQV 460
Query 153 VAV 155
A
Sbjct 461 FAA 463
>gi|330466269|ref|YP_004404012.1| Allergen V5/Tpx-1 family protein [Verrucosispora maris AB-18-032]
gi|328809240|gb|AEB43412.1| Allergen V5/Tpx-1 family protein [Verrucosispora maris AB-18-032]
Length=485
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/155 (33%), Positives = 77/155 (50%), Gaps = 9/155 (5%)
Query 4 RASATCALSATTAVAIMAAPAARADDKRLNDGVVANVYTVQRQAGCTNDVTINPQLQLAA 63
R SA S + + A+P+ A + VV V + +AGC +T++ +L AA
Sbjct 335 RQSAERRGSPSRGATVTASPSNPAGASQAAQ-VVDLVNAERAKAGC-GALTVDEKLTTAA 392
Query 64 QWHTLDLLNNRHLNDDTGSDGSTPQDRAHAAGFRGKV-AETVAINPAVAISGIELINQWY 122
Q H+ D +NR+++ TGSDGS P +R G+ + E VA N S +++ W
Sbjct 393 QRHSQDQADNRNMS-HTGSDGSDPGERIDRVGYAWRTYGENVAWN---QQSPAAVMDAWM 448
Query 123 YNPAFFAIMSDCANTQIGVW--SENSPDRTVVVAV 155
+P A + +CA T+IGV S N P T V A
Sbjct 449 NSPGHRANILNCAFTEIGVGVASSNGPYWTQVFAA 483
>gi|183980411|ref|YP_001848702.1| hypothetical protein MMAR_0380 [Mycobacterium marinum M]
gi|183173737|gb|ACC38847.1| conserved hypothetical protein [Mycobacterium marinum M]
Length=41
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/40 (68%), Positives = 30/40 (75%), Gaps = 5/40 (12%)
Query 186 IDPSPDYDASDEIEYGINWLPWILRGV-----YPPPAMPP 220
+DPSPDYDASDEIE+ N+L W LRGV YPPPA PP
Sbjct 1 MDPSPDYDASDEIEFFFNYLTWGLRGVTDGNGYPPPAYPP 40
>gi|118463598|ref|YP_881106.1| hypothetical protein MAV_1886 [Mycobacterium avium 104]
gi|118164885|gb|ABK65782.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=42
Score = 53.9 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/32 (69%), Positives = 27/32 (85%), Gaps = 0/32 (0%)
Query 181 QENVPIDPSPDYDASDEIEYGINWLPWILRGV 212
+E +DP+PDYDASDE+EYG+NW WILRGV
Sbjct 2 EERCSMDPNPDYDASDELEYGMNWFAWILRGV 33
>gi|342859994|ref|ZP_08716646.1| hypothetical protein MCOL_13980 [Mycobacterium colombiense CECT
3035]
gi|342132372|gb|EGT85601.1| hypothetical protein MCOL_13980 [Mycobacterium colombiense CECT
3035]
Length=158
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/93 (37%), Positives = 52/93 (56%), Gaps = 3/93 (3%)
Query 44 QRQAGCTNDVTINPQLQLAAQWHTLDLLNNRHLNDDTGSDGSTPQDRAHAAGFRGKVA-E 102
Q + GC ++ +P+L AAQWH D+L N ++ GSDGS+PQ R AAG+R + + E
Sbjct 44 QLRPGC-GPISEDPRLTEAAQWHADDMLRNG-VSGHIGSDGSSPQARITAAGYRSRYSGE 101
Query 103 TVAINPAVAISGIELINQWYYNPAFFAIMSDCA 135
V A + E ++ W +P I+ +CA
Sbjct 102 IVFWGTGSAATAKEALDMWMQSPPHRDIILNCA 134
>gi|288917373|ref|ZP_06411740.1| SCP-like extracellular [Frankia sp. EUN1f]
gi|288351238|gb|EFC85448.1| SCP-like extracellular [Frankia sp. EUN1f]
Length=263
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/123 (32%), Positives = 61/123 (50%), Gaps = 6/123 (4%)
Query 37 VANVYTVQRQAGCTNDVTINPQLQLAAQWHTLDLLNNRHLNDDTGSDGSTPQDRAHAAGF 96
V + V+RQA + ++ L AAQ H+ D+ N + + +G DG++ DRA AAGF
Sbjct 143 VVRLTNVERQAAGCGPLAVDASLSAAAQAHSADMAANNYFS-HSGLDGTSAGDRARAAGF 201
Query 97 -RGKVAETVAINPAVAISGIELINQWYYNPAFFAIMSDCANTQIGV-WSENSPDRTVVVA 154
V E +A A + I++ W + A + +CA T IGV ++E R
Sbjct 202 PSTYVGENIAAGSATPAATIQM---WMGSSGHRANILNCAYTHIGVGYAEGGSYRYYWTQ 258
Query 155 VYG 157
V+G
Sbjct 259 VFG 261
>gi|182434106|ref|YP_001821825.1| RNA polymerase ECF-subfamily sigma factor [Streptomyces griseus
subsp. griseus NBRC 13350]
gi|178462622|dbj|BAG17142.1| putative RNA polymerase ECF-subfamily sigma factor [Streptomyces
griseus subsp. griseus NBRC 13350]
Length=534
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/124 (31%), Positives = 58/124 (47%), Gaps = 5/124 (4%)
Query 35 GVVANVYTVQRQAGCTNDVTINPQLQLAAQWHTLDLLNNRHLNDDTGSDGSTPQDRAHAA 94
G V ++ +R VT+N QL AAQ H+ D+ N + + T DG P DR AA
Sbjct 413 GQVTDLVNAERAKEGCGPVTVNDQLNTAAQRHSADMEANDYFS-HTSQDGRDPGDRITAA 471
Query 95 GFR-GKVAETVAINPAVAISGIELINQWYYNPAFFAIMSDCANTQIGVWSENSPDRTVVV 153
G+R E +A +++ W +P A + +C+ +IGV +NS V
Sbjct 472 GYRWSTYGENIAKGQQTP---ADVMRSWMDSPGHRANILNCSFKEIGVGKQNSGGGPVWT 528
Query 154 AVYG 157
V+G
Sbjct 529 QVFG 532
>gi|326774630|ref|ZP_08233895.1| putative RNA polymerase, sigma 70 family subunit [Streptomyces
cf. griseus XylebKG-1]
gi|326654963|gb|EGE39809.1| putative RNA polymerase, sigma 70 family subunit [Streptomyces
griseus XylebKG-1]
Length=534
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/124 (31%), Positives = 58/124 (47%), Gaps = 5/124 (4%)
Query 35 GVVANVYTVQRQAGCTNDVTINPQLQLAAQWHTLDLLNNRHLNDDTGSDGSTPQDRAHAA 94
G V ++ +R VT+N QL AAQ H+ D+ N + + T DG P DR AA
Sbjct 413 GQVTDLVNAERAKEGCGPVTVNDQLNTAAQRHSADMEANDYFS-HTSQDGRDPGDRITAA 471
Query 95 GFR-GKVAETVAINPAVAISGIELINQWYYNPAFFAIMSDCANTQIGVWSENSPDRTVVV 153
G+R E +A +++ W +P A + +C+ +IGV +NS V
Sbjct 472 GYRWSTYGENIAKGQQTP---ADVMRSWMDSPGHRANILNCSFKEIGVGKQNSGGGPVWT 528
Query 154 AVYG 157
V+G
Sbjct 529 QVFG 532
>gi|296167348|ref|ZP_06849750.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295897292|gb|EFG76896.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=41
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 30/40 (75%), Gaps = 5/40 (12%)
Query 186 IDPSPDYDASDEIEYGINWLPWILRGV-----YPPPAMPP 220
+DPSPDYDASDEIE+ ++PW LRGV YPPPA PP
Sbjct 1 MDPSPDYDASDEIEFFFRYVPWGLRGVVDGNGYPPPAYPP 40
>gi|158314103|ref|YP_001506611.1| SCP-like extracellular protein [Frankia sp. EAN1pec]
gi|158109508|gb|ABW11705.1| SCP-like extracellular [Frankia sp. EAN1pec]
Length=212
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/106 (33%), Positives = 53/106 (50%), Gaps = 5/106 (4%)
Query 37 VANVYTVQRQAGCTNDVTINPQLQLAAQWHTLDLLNNRHLNDDTGSDGSTPQDRAHAAGF 96
V + V+R+ + ++ +L AAQ HT D+ N + + D G DGS+P DR AAGF
Sbjct 92 VVRLTNVEREKAGCGPLAVDTRLTAAAQAHTADMAANDYFSHD-GQDGSSPGDRTRAAGF 150
Query 97 -RGKVAETVAINPAVAISGIELINQWYYNPAFFAIMSDCANTQIGV 141
G V E +A + +++ W + A + +C T IGV
Sbjct 151 PSGFVGENIAAGSTTPAATLQM---WMNSSGHRANILNCDYTHIGV 193
>gi|41406379|ref|NP_959215.1| hypothetical protein MAP0281 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41394727|gb|AAS02598.1| hypothetical protein MAP_0281 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|336460003|gb|EGO38913.1| Cysteine-rich secretory protein family [Mycobacterium avium subsp.
paratuberculosis S397]
Length=157
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/161 (30%), Positives = 72/161 (45%), Gaps = 12/161 (7%)
Query 1 MSRRASATCALSATTAV----AIMAAPAARADDKRLNDGVVANVYTVQRQAGCTNDVTIN 56
M+R+A + TA AARADD ++ N RQA + +
Sbjct 1 MTRKAEIVAVFAICTAFMTASGAFGGFAARADDPE----ILYNGINQLRQA--CGPIAED 54
Query 57 PQLQLAAQWHTLDLLNNRHLNDDTGSDGSTPQDRAHAAGFRGKVA-ETVAINPAVAISGI 115
P+L AAQ H D+L N ++ GSDGS+PQ R AAG+R + + E V A +
Sbjct 55 PRLTEAAQQHADDMLRN-GVSGHIGSDGSSPQARIAAAGYRSRYSGEIVFWATGSAATPS 113
Query 116 ELINQWYYNPAFFAIMSDCANTQIGVWSENSPDRTVVVAVY 156
E ++ W +P AI+ +C G + ++ V +
Sbjct 114 EALDMWMQSPPHRAIILNCGFNAGGFATARDGNKMTAVGDF 154
>gi|284029267|ref|YP_003379198.1| SCP-like extracellular [Kribbella flavida DSM 17836]
gi|283808560|gb|ADB30399.1| SCP-like extracellular [Kribbella flavida DSM 17836]
Length=290
Score = 52.0 bits (123), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/109 (33%), Positives = 53/109 (49%), Gaps = 11/109 (10%)
Query 37 VANVYTVQRQAGCTNDVTINPQLQLAAQWHTLDLLNNRHLNDDTGSDGSTPQDRAHAAGF 96
V ++ +RQ + N L AA+ H D+++ RH D T DG +P DR AAGF
Sbjct 167 VLHLTNAERQKAGCGPLRSNAALTRAAEGHAADMVD-RHYFDHTSLDGRSPFDRMKAAGF 225
Query 97 RGK-VAETVAI---NPAVAISGIELINQWYYNPAFFAIMSDCANTQIGV 141
G +AE +A+ +PA + G W + M +C+ T IG+
Sbjct 226 TGGAMAENIAVGYSSPAAVVEG------WMKSTGHRKNMLNCSYTMIGI 268
>gi|145221315|ref|YP_001131993.1| hypothetical protein Mflv_0720 [Mycobacterium gilvum PYR-GCK]
gi|315441797|ref|YP_004074676.1| hypothetical protein Mspyr1_01080 [Mycobacterium sp. Spyr1]
gi|145213801|gb|ABP43205.1| conserved hypothetical protein [Mycobacterium gilvum PYR-GCK]
gi|315260100|gb|ADT96841.1| hypothetical protein Mspyr1_01080 [Mycobacterium sp. Spyr1]
Length=36
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 22/27 (82%), Positives = 25/27 (93%), Gaps = 0/27 (0%)
Query 186 IDPSPDYDASDEIEYGINWLPWILRGV 212
+DP+PDYDASDE+EYGINW WILRGV
Sbjct 1 MDPNPDYDASDELEYGINWFAWILRGV 27
>gi|290958918|ref|YP_003490100.1| hypothetical protein SCAB_44921 [Streptomyces scabiei 87.22]
gi|260648444|emb|CBG71555.1| putative secreted protein [Streptomyces scabiei 87.22]
Length=289
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/124 (32%), Positives = 66/124 (54%), Gaps = 6/124 (4%)
Query 19 IMAAPAARADDKRLNDGVVANVYTVQRQAGCTNDVTINPQLQLAAQWHTLDLLNNRHLND 78
+ APA + D D V+ V + +AGC+ VT++ +L AAQ H+ D+ ++ +++
Sbjct 154 VTPAPAPTSADSGPADRVLELVNAERAKAGCS-PVTVDAKLTKAAQNHSQDMADHSNMS- 211
Query 79 DTGSDGSTPQDRAHAAGFRGKVA-ETVAINPAVAISGIELINQWYYNPAFFAIMSDCANT 137
TGSDGS+ DR G+ + A E VA A S +++ W +P A + +C
Sbjct 212 HTGSDGSSMTDRLGRVGYAYRSAGENVAAGYGTADS---VMDGWMNSPGHKANILNCGFK 268
Query 138 QIGV 141
+IG+
Sbjct 269 EIGI 272
>gi|240168167|ref|ZP_04746826.1| hypothetical protein MkanA1_02552 [Mycobacterium kansasii ATCC
12478]
Length=41
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/40 (63%), Positives = 29/40 (73%), Gaps = 5/40 (12%)
Query 186 IDPSPDYDASDEIEYGINWLPWILRGV-----YPPPAMPP 220
+DPSPDYD SDEIE+ N+L W +RGV YPPPA PP
Sbjct 1 MDPSPDYDVSDEIEFFFNYLTWGIRGVEDGNGYPPPAYPP 40
Lambda K H
0.316 0.131 0.406
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 276581767512
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40