BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv1976c
Length=135
Score E
Sequences producing significant alignments: (Bits) Value
gi|15609113|ref|NP_216492.1| hypothetical protein Rv1976c [Mycob... 266 9e-70
gi|167970501|ref|ZP_02552778.1| hypothetical protein MtubH3_2170... 253 6e-66
gi|240170197|ref|ZP_04748856.1| hypothetical protein MkanA1_1285... 191 2e-47
gi|342859586|ref|ZP_08716239.1| hypothetical protein MCOL_11923 ... 186 1e-45
gi|296164965|ref|ZP_06847520.1| conserved hypothetical protein [... 184 3e-45
gi|183982896|ref|YP_001851187.1| hypothetical protein MMAR_2892 ... 181 3e-44
gi|254820888|ref|ZP_05225889.1| hypothetical protein MintA_13220... 178 2e-43
gi|289570066|ref|ZP_06450293.1| conserved hypothetical protein [... 175 2e-42
gi|120402997|ref|YP_952826.1| hypothetical protein Mvan_2002 [My... 170 7e-41
gi|41407753|ref|NP_960589.1| hypothetical protein MAP1655c [Myco... 161 2e-38
gi|15827952|ref|NP_302215.1| hypothetical protein ML1791 [Mycoba... 155 2e-36
gi|126434584|ref|YP_001070275.1| hypothetical protein Mjls_1997 ... 150 8e-35
gi|118464542|ref|YP_881957.1| hypothetical protein MAV_2768 [Myc... 149 2e-34
gi|108798984|ref|YP_639181.1| hypothetical protein Mmcs_2016 [My... 145 1e-33
gi|254775248|ref|ZP_05216764.1| hypothetical protein MaviaA2_113... 144 5e-33
gi|333990657|ref|YP_004523271.1| hypothetical protein JDM601_201... 142 2e-32
gi|315445253|ref|YP_004078132.1| hypothetical protein Mspyr1_369... 139 1e-31
gi|118468405|ref|YP_887772.1| hypothetical protein MSMEG_3467 [M... 134 6e-30
gi|284045393|ref|YP_003395733.1| hypothetical protein Cwoe_3941 ... 120 9e-26
gi|336116200|ref|YP_004570966.1| hypothetical protein MLP_05490 ... 70.5 9e-11
gi|239991565|ref|ZP_04712229.1| hypothetical protein SrosN1_2995... 64.7 5e-09
gi|284028550|ref|YP_003378481.1| hypothetical protein Kfla_0561 ... 62.4 2e-08
gi|262202689|ref|YP_003273897.1| hypothetical protein Gbro_2787 ... 62.0 3e-08
gi|302541903|ref|ZP_07294245.1| conserved hypothetical protein [... 61.2 5e-08
gi|291301203|ref|YP_003512481.1| hypothetical protein Snas_3731 ... 60.8 6e-08
gi|158313096|ref|YP_001505604.1| hypothetical protein Franean1_1... 60.8 7e-08
gi|291454864|ref|ZP_06594254.1| conserved hypothetical protein [... 59.7 1e-07
gi|336179417|ref|YP_004584792.1| hypothetical protein FsymDg_359... 59.7 1e-07
gi|256380949|ref|YP_003104609.1| hypothetical protein Amir_6968 ... 59.3 2e-07
gi|296129261|ref|YP_003636511.1| hypothetical protein Cfla_1414 ... 58.2 4e-07
gi|290956593|ref|YP_003487775.1| hypothetical protein SCAB_20971... 58.2 4e-07
gi|159037903|ref|YP_001537156.1| hypothetical protein Sare_2307 ... 58.2 4e-07
gi|329940174|ref|ZP_08289456.1| hypothetical protein SGM_4948 [S... 57.8 5e-07
gi|330468568|ref|YP_004406311.1| hypothetical protein VAB18032_2... 57.8 5e-07
gi|21224349|ref|NP_630128.1| hypothetical protein SCO6015 [Strep... 57.8 6e-07
gi|289768344|ref|ZP_06527722.1| conserved hypothetical protein [... 57.4 6e-07
gi|302554882|ref|ZP_07307224.1| conserved hypothetical protein [... 57.4 7e-07
gi|302867373|ref|YP_003836010.1| hypothetical protein Micau_2900... 57.0 8e-07
gi|291436588|ref|ZP_06575978.1| conserved hypothetical protein [... 57.0 9e-07
gi|345009944|ref|YP_004812298.1| hypothetical protein Strvi_2293... 57.0 1e-06
gi|315506222|ref|YP_004085109.1| hypothetical protein ML5_5497 [... 57.0 1e-06
gi|294815674|ref|ZP_06774317.1| Hypothetical protein SCLAV_4843 ... 56.2 1e-06
gi|302532432|ref|ZP_07284774.1| conserved hypothetical protein [... 56.2 2e-06
gi|238064495|ref|ZP_04609204.1| hypothetical protein MCAG_05461 ... 55.5 2e-06
gi|226359645|ref|YP_002777423.1| hypothetical protein ROP_02310 ... 55.5 3e-06
gi|86742181|ref|YP_482581.1| hypothetical protein Francci3_3499 ... 55.1 4e-06
gi|300784360|ref|YP_003764651.1| NTP pyrophosphohydrolase [Amyco... 54.3 6e-06
gi|340525780|gb|AEK40985.1| NTP pyrophosphohydrolase [Amycolatop... 54.3 6e-06
gi|29828783|ref|NP_823417.1| hypothetical protein SAV_2241 [Stre... 54.3 6e-06
gi|170781729|ref|YP_001710061.1| hypothetical protein CMS_1332 [... 53.9 7e-06
>gi|15609113|ref|NP_216492.1| hypothetical protein Rv1976c [Mycobacterium tuberculosis H37Rv]
gi|15841452|ref|NP_336489.1| hypothetical protein MT2028 [Mycobacterium tuberculosis CDC1551]
gi|148661785|ref|YP_001283308.1| hypothetical protein MRA_1987 [Mycobacterium tuberculosis H37Ra]
62 more sequence titles
Length=135
Score = 266 bits (679), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 134/135 (99%), Positives = 135/135 (100%), Gaps = 0/135 (0%)
Query 1 VRWIVDGMNVIGSRPDGWWRDRHRAMVMLVERLEGWAITKARGDDVTVVFERPPSTAIPS 60
+RWIVDGMNVIGSRPDGWWRDRHRAMVMLVERLEGWAITKARGDDVTVVFERPPSTAIPS
Sbjct 1 MRWIVDGMNVIGSRPDGWWRDRHRAMVMLVERLEGWAITKARGDDVTVVFERPPSTAIPS 60
Query 61 SVVEVAHAPKAAANSADDEIVRLVRSGAQPQEIRVVTSDKALTDRVRDLGAAVYPAERFR 120
SVVEVAHAPKAAANSADDEIVRLVRSGAQPQEIRVVTSDKALTDRVRDLGAAVYPAERFR
Sbjct 61 SVVEVAHAPKAAANSADDEIVRLVRSGAQPQEIRVVTSDKALTDRVRDLGAAVYPAERFR 120
Query 121 DLIDPRGSNAARRTQ 135
DLIDPRGSNAARRTQ
Sbjct 121 DLIDPRGSNAARRTQ 135
>gi|167970501|ref|ZP_02552778.1| hypothetical protein MtubH3_21708 [Mycobacterium tuberculosis
H37Ra]
gi|254550997|ref|ZP_05141444.1| hypothetical protein Mtube_11131 [Mycobacterium tuberculosis
'98-R604 INH-RIF-EM']
gi|339298524|gb|AEJ50634.1| hypothetical protein CCDC5180_1797 [Mycobacterium tuberculosis
CCDC5180]
Length=128
Score = 253 bits (646), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 128/128 (100%), Positives = 128/128 (100%), Gaps = 0/128 (0%)
Query 8 MNVIGSRPDGWWRDRHRAMVMLVERLEGWAITKARGDDVTVVFERPPSTAIPSSVVEVAH 67
MNVIGSRPDGWWRDRHRAMVMLVERLEGWAITKARGDDVTVVFERPPSTAIPSSVVEVAH
Sbjct 1 MNVIGSRPDGWWRDRHRAMVMLVERLEGWAITKARGDDVTVVFERPPSTAIPSSVVEVAH 60
Query 68 APKAAANSADDEIVRLVRSGAQPQEIRVVTSDKALTDRVRDLGAAVYPAERFRDLIDPRG 127
APKAAANSADDEIVRLVRSGAQPQEIRVVTSDKALTDRVRDLGAAVYPAERFRDLIDPRG
Sbjct 61 APKAAANSADDEIVRLVRSGAQPQEIRVVTSDKALTDRVRDLGAAVYPAERFRDLIDPRG 120
Query 128 SNAARRTQ 135
SNAARRTQ
Sbjct 121 SNAARRTQ 128
>gi|240170197|ref|ZP_04748856.1| hypothetical protein MkanA1_12853 [Mycobacterium kansasii ATCC
12478]
Length=139
Score = 191 bits (486), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 102/133 (77%), Positives = 113/133 (85%), Gaps = 2/133 (1%)
Query 1 VRWIVDGMNVIGSRPDGWWRDRHRAMVMLVERLEGWAI--TKARGDDVTVVFERPPSTAI 58
+RWIVDGMNVIGSRPDGWW+DRH AMV LV+RL+ WA A G+ VTVVFERPPS AI
Sbjct 1 MRWIVDGMNVIGSRPDGWWKDRHGAMVALVDRLDRWAAEGQGADGNHVTVVFERPPSRAI 60
Query 59 PSSVVEVAHAPKAAANSADDEIVRLVRSGAQPQEIRVVTSDKALTDRVRDLGAAVYPAER 118
SSVVEVA+APKAAANSADDEIVRLV++ A+P I VVTSDKALTDRVR LGA+VYPAER
Sbjct 61 GSSVVEVAYAPKAAANSADDEIVRLVQADARPDAIAVVTSDKALTDRVRRLGASVYPAER 120
Query 119 FRDLIDPRGSNAA 131
FRDLIDPR +A
Sbjct 121 FRDLIDPRAIGSA 133
>gi|342859586|ref|ZP_08716239.1| hypothetical protein MCOL_11923 [Mycobacterium colombiense CECT
3035]
gi|342132718|gb|EGT85938.1| hypothetical protein MCOL_11923 [Mycobacterium colombiense CECT
3035]
Length=129
Score = 186 bits (472), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 96/127 (76%), Positives = 110/127 (87%), Gaps = 2/127 (1%)
Query 1 VRWIVDGMNVIGSRPDGWWRDRHRAMVMLVERLEGWAITKARGDDVTVVFERPPSTAIPS 60
VRWIVDGMNVIGSRPDGWW+DR+ AMV LVE L+ WA +G+ VTVVFERPPSTAI S
Sbjct 4 VRWIVDGMNVIGSRPDGWWKDRNGAMVTLVESLDRWA--SGQGETVTVVFERPPSTAIAS 61
Query 61 SVVEVAHAPKAAANSADDEIVRLVRSGAQPQEIRVVTSDKALTDRVRDLGAAVYPAERFR 120
SVVE+AHAP+AAANSADDEIVRLV + A P +IRVVTSD+ALT+RVR LGA+V+ +E FR
Sbjct 62 SVVEIAHAPRAAANSADDEIVRLVAADAAPHDIRVVTSDRALTERVRSLGASVHRSEGFR 121
Query 121 DLIDPRG 127
DLIDPRG
Sbjct 122 DLIDPRG 128
>gi|296164965|ref|ZP_06847520.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295899613|gb|EFG79064.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=137
Score = 184 bits (468), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 96/128 (75%), Positives = 112/128 (88%), Gaps = 2/128 (1%)
Query 1 VRWIVDGMNVIGSRPDGWWRDRHRAMVMLVERLEGWAITKARGDDVTVVFERPPSTAIPS 60
VRWIVDGMNVIGSRPDGWW+DR RAMV+LV+RL+ WA T++ D VTVVFERPPSTAI +
Sbjct 12 VRWIVDGMNVIGSRPDGWWKDRGRAMVVLVDRLDRWAATQS--DSVTVVFERPPSTAITA 69
Query 61 SVVEVAHAPKAAANSADDEIVRLVRSGAQPQEIRVVTSDKALTDRVRDLGAAVYPAERFR 120
SV+EVA+AP+AAANSADDEIVR V++ +P +IRVVTSD+ LTDRV LGAAV+PA FR
Sbjct 70 SVIEVAYAPQAAANSADDEIVRRVQADPRPHDIRVVTSDRGLTDRVVGLGAAVHPAAGFR 129
Query 121 DLIDPRGS 128
DLIDPRGS
Sbjct 130 DLIDPRGS 137
>gi|183982896|ref|YP_001851187.1| hypothetical protein MMAR_2892 [Mycobacterium marinum M]
gi|183176222|gb|ACC41332.1| conserved hypothetical protein [Mycobacterium marinum M]
Length=136
Score = 181 bits (459), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 93/131 (71%), Positives = 106/131 (81%), Gaps = 2/131 (1%)
Query 1 VRWIVDGMNVIGSRPDGWWRDRHRAMVMLVERLEGWAITK--ARGDDVTVVFERPPSTAI 58
+ WI+DGMNVIGSRPDGWW+DRH AMV LV RLE WA + A G DVTV+FERPPST I
Sbjct 1 MHWIIDGMNVIGSRPDGWWKDRHGAMVALVHRLERWASEQDGAGGKDVTVIFERPPSTPI 60
Query 59 PSSVVEVAHAPKAAANSADDEIVRLVRSGAQPQEIRVVTSDKALTDRVRDLGAAVYPAER 118
SSV+EVAHAPKAAANSADDEIVR V + QP+++RVVTSDK L +RV LGA+ Y AE
Sbjct 61 CSSVLEVAHAPKAAANSADDEIVRRVAAEPQPRDVRVVTSDKLLVERVTKLGASTYRAES 120
Query 119 FRDLIDPRGSN 129
FRDLIDPRG+
Sbjct 121 FRDLIDPRGAK 131
>gi|254820888|ref|ZP_05225889.1| hypothetical protein MintA_13220 [Mycobacterium intracellulare
ATCC 13950]
Length=126
Score = 178 bits (452), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 91/126 (73%), Positives = 108/126 (86%), Gaps = 2/126 (1%)
Query 1 VRWIVDGMNVIGSRPDGWWRDRHRAMVMLVERLEGWAITKARGDDVTVVFERPPSTAIPS 60
+RWIVDGMNVIGSRPDGWW+DR AMV LVERL+ WA ++G+ VTVVFERPPS I S
Sbjct 1 MRWIVDGMNVIGSRPDGWWKDREGAMVALVERLDRWA--SSQGETVTVVFERPPSRVIAS 58
Query 61 SVVEVAHAPKAAANSADDEIVRLVRSGAQPQEIRVVTSDKALTDRVRDLGAAVYPAERFR 120
S VE+AHAP+AAANSADDEIVRLV + A P++IRVVTSD+ALT+RVR LGA+V+ +E FR
Sbjct 59 SAVEIAHAPRAAANSADDEIVRLVAADAAPRDIRVVTSDRALTERVRSLGASVHRSESFR 118
Query 121 DLIDPR 126
DL+DPR
Sbjct 119 DLVDPR 124
>gi|289570066|ref|ZP_06450293.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
gi|289543820|gb|EFD47468.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
Length=90
Score = 175 bits (444), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 89/90 (99%), Positives = 90/90 (100%), Gaps = 0/90 (0%)
Query 46 VTVVFERPPSTAIPSSVVEVAHAPKAAANSADDEIVRLVRSGAQPQEIRVVTSDKALTDR 105
+TVVFERPPSTAIPSSVVEVAHAPKAAANSADDEIVRLVRSGAQPQEIRVVTSDKALTDR
Sbjct 1 MTVVFERPPSTAIPSSVVEVAHAPKAAANSADDEIVRLVRSGAQPQEIRVVTSDKALTDR 60
Query 106 VRDLGAAVYPAERFRDLIDPRGSNAARRTQ 135
VRDLGAAVYPAERFRDLIDPRGSNAARRTQ
Sbjct 61 VRDLGAAVYPAERFRDLIDPRGSNAARRTQ 90
>gi|120402997|ref|YP_952826.1| hypothetical protein Mvan_2002 [Mycobacterium vanbaalenii PYR-1]
gi|119955815|gb|ABM12820.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1]
Length=124
Score = 170 bits (430), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 89/126 (71%), Positives = 98/126 (78%), Gaps = 2/126 (1%)
Query 1 VRWIVDGMNVIGSRPDGWWRDRHRAMVMLVERLEGWAITKARGDDVTVVFERPPSTAIPS 60
+RWIVDGMNVIGSRPDGWWRDRHRAMV LVE LE WA+ G +VTVVFERPPS I S
Sbjct 1 MRWIVDGMNVIGSRPDGWWRDRHRAMVTLVESLERWALVD--GAEVTVVFERPPSPPIES 58
Query 61 SVVEVAHAPKAAANSADDEIVRLVRSGAQPQEIRVVTSDKALTDRVRDLGAAVYPAERFR 120
+VV V AP A NSADDEIVRLVR P++IRV TSD+AL++RVR GA V PAER R
Sbjct 59 AVVAVTSAPSPAPNSADDEIVRLVRGDPHPEQIRVATSDRALSERVRGAGATVVPAERLR 118
Query 121 DLIDPR 126
LIDPR
Sbjct 119 QLIDPR 124
>gi|41407753|ref|NP_960589.1| hypothetical protein MAP1655c [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41396107|gb|AAS03972.1| hypothetical protein MAP_1655c [Mycobacterium avium subsp. paratuberculosis
K-10]
Length=126
Score = 161 bits (408), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 84/126 (67%), Positives = 100/126 (80%), Gaps = 2/126 (1%)
Query 1 VRWIVDGMNVIGSRPDGWWRDRHRAMVMLVERLEGWAITKARGDDVTVVFERPPSTAIPS 60
+RWIVDGMNVIGSRPDGWW+DR AMV LV+RL+ WA R DDVTVVFERPP+ + S
Sbjct 1 MRWIVDGMNVIGSRPDGWWKDRDGAMVALVQRLDRWA--SGRDDDVTVVFERPPAAVVTS 58
Query 61 SVVEVAHAPKAAANSADDEIVRLVRSGAQPQEIRVVTSDKALTDRVRDLGAAVYPAERFR 120
SV+ +AHAP+AAANSADDEIVRLV + P I VVTSD+ L +RVR+LGA V ++ FR
Sbjct 59 SVIGIAHAPRAAANSADDEIVRLVTADPDPPGICVVTSDRTLAERVRNLGARVQGSDSFR 118
Query 121 DLIDPR 126
DLI+PR
Sbjct 119 DLIEPR 124
>gi|15827952|ref|NP_302215.1| hypothetical protein ML1791 [Mycobacterium leprae TN]
gi|221230429|ref|YP_002503845.1| hypothetical protein MLBr_01791 [Mycobacterium leprae Br4923]
gi|13093505|emb|CAC30744.1| conserved hypothetical protein [Mycobacterium leprae]
gi|219933536|emb|CAR71886.1| conserved hypothetical protein [Mycobacterium leprae Br4923]
Length=147
Score = 155 bits (392), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 82/124 (67%), Positives = 97/124 (79%), Gaps = 2/124 (1%)
Query 1 VRWIVDGMNVIGSRPDGWWRDRHRAMVMLVERLEGWAITKARGDDVTVVFERPPSTAIPS 60
VRWIVD MNVIG+RPD WW+DR AMV LV +LE WA T+ + VTVVFERPPS +I S
Sbjct 23 VRWIVDAMNVIGTRPDCWWKDRRGAMVRLVGKLERWASTER--NHVTVVFERPPSPSIRS 80
Query 61 SVVEVAHAPKAAANSADDEIVRLVRSGAQPQEIRVVTSDKALTDRVRDLGAAVYPAERFR 120
SV+ +AHAPKA +SADDEIVRLV++ +PQ I VVTSD ALTDRV+++GA YPA RFR
Sbjct 81 SVIVIAHAPKAFPDSADDEIVRLVQADPEPQGICVVTSDSALTDRVQEVGALAYPAARFR 140
Query 121 DLID 124
ID
Sbjct 141 KHID 144
>gi|126434584|ref|YP_001070275.1| hypothetical protein Mjls_1997 [Mycobacterium sp. JLS]
gi|126234384|gb|ABN97784.1| conserved hypothetical protein [Mycobacterium sp. JLS]
Length=124
Score = 150 bits (378), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 80/126 (64%), Positives = 92/126 (74%), Gaps = 2/126 (1%)
Query 1 VRWIVDGMNVIGSRPDGWWRDRHRAMVMLVERLEGWAITKARGDDVTVVFERPPSTAIPS 60
+RWIVDGMNVIG RPDGWWRDR AM LV LE WA+ A G +V+VVFE+P + + S
Sbjct 1 MRWIVDGMNVIGCRPDGWWRDRRGAMTGLVLALERWAV--AEGAEVSVVFEKPLTPTLLS 58
Query 61 SVVEVAHAPKAAANSADDEIVRLVRSGAQPQEIRVVTSDKALTDRVRDLGAAVYPAERFR 120
V V HAP AA NSADDEIVR+VR+ P EI V TSD+AL +RVR GAA YPAER R
Sbjct 59 DAVTVTHAPAAAPNSADDEIVRMVRAADDPGEIVVATSDRALGERVRAAGAATYPAERLR 118
Query 121 DLIDPR 126
+ IDPR
Sbjct 119 NDIDPR 124
>gi|118464542|ref|YP_881957.1| hypothetical protein MAV_2768 [Mycobacterium avium 104]
gi|118165829|gb|ABK66726.1| conserved hypothetical protein [Mycobacterium avium 104]
gi|336457413|gb|EGO36422.1| Protein of unknown function (DUF901) [Mycobacterium avium subsp.
paratuberculosis S397]
Length=119
Score = 149 bits (375), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 78/119 (66%), Positives = 93/119 (79%), Gaps = 2/119 (1%)
Query 8 MNVIGSRPDGWWRDRHRAMVMLVERLEGWAITKARGDDVTVVFERPPSTAIPSSVVEVAH 67
MNVIGSRPDGWW+DR AMV LV+RL+ WA R DDVTVVFERPP+ + SSV+ +AH
Sbjct 1 MNVIGSRPDGWWKDRDGAMVALVQRLDRWA--SGRDDDVTVVFERPPAAVVTSSVIGIAH 58
Query 68 APKAAANSADDEIVRLVRSGAQPQEIRVVTSDKALTDRVRDLGAAVYPAERFRDLIDPR 126
AP+AAANSADDEIVRLV + P I VVTSD+ L +RVR+LGA V ++ FRDLI+PR
Sbjct 59 APRAAANSADDEIVRLVTADPDPPGICVVTSDRTLAERVRNLGARVQGSDSFRDLIEPR 117
>gi|108798984|ref|YP_639181.1| hypothetical protein Mmcs_2016 [Mycobacterium sp. MCS]
gi|119868099|ref|YP_938051.1| hypothetical protein Mkms_2062 [Mycobacterium sp. KMS]
gi|108769403|gb|ABG08125.1| conserved hypothetical protein [Mycobacterium sp. MCS]
gi|119694188|gb|ABL91261.1| conserved hypothetical protein [Mycobacterium sp. KMS]
Length=124
Score = 145 bits (367), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 79/126 (63%), Positives = 91/126 (73%), Gaps = 2/126 (1%)
Query 1 VRWIVDGMNVIGSRPDGWWRDRHRAMVMLVERLEGWAITKARGDDVTVVFERPPSTAIPS 60
+RWIVDGMNVIG RPDGWWRDR AM LV LE WA+ A G +V+VVFE+P + + S
Sbjct 1 MRWIVDGMNVIGCRPDGWWRDRRGAMTGLVLALERWAV--AEGAEVSVVFEKPLTPPLLS 58
Query 61 SVVEVAHAPKAAANSADDEIVRLVRSGAQPQEIRVVTSDKALTDRVRDLGAAVYPAERFR 120
V V HAP AA NSADDEIVR+V + P EI V TSD+AL +RVR GAA YPAER R
Sbjct 59 DGVTVTHAPAAAPNSADDEIVRMVCAADDPGEIVVATSDRALGERVRAAGAATYPAERLR 118
Query 121 DLIDPR 126
+ IDPR
Sbjct 119 NDIDPR 124
>gi|254775248|ref|ZP_05216764.1| hypothetical protein MaviaA2_11341 [Mycobacterium avium subsp.
avium ATCC 25291]
Length=122
Score = 144 bits (363), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 78/122 (64%), Positives = 94/122 (78%), Gaps = 5/122 (4%)
Query 8 MNVIGSRPDGWWRDRHRAMVMLVERLEGWAITKARGDDVTVVFERPPSTAIPSSVVEVAH 67
MNVIGSRPDGWW+DR AMV LV+RL+ WA R DDVTVVFERPP+ + SSV+ +AH
Sbjct 1 MNVIGSRPDGWWKDRDGAMVALVQRLDRWA--SGRDDDVTVVFERPPAAVVTSSVIGIAH 58
Query 68 APKAAANSADDEIVRLVRSGAQPQEIRVVTSDKA---LTDRVRDLGAAVYPAERFRDLID 124
AP+AAANSADDEIVRLV + P I VVTSD++ L +RVR+LGA V ++ FRDLI+
Sbjct 59 APRAAANSADDEIVRLVTADPDPPGICVVTSDRSDRTLAERVRNLGARVQGSDSFRDLIE 118
Query 125 PR 126
PR
Sbjct 119 PR 120
>gi|333990657|ref|YP_004523271.1| hypothetical protein JDM601_2017 [Mycobacterium sp. JDM601]
gi|333486625|gb|AEF36017.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=124
Score = 142 bits (358), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 77/124 (63%), Positives = 89/124 (72%), Gaps = 2/124 (1%)
Query 1 VRWIVDGMNVIGSRPDGWWRDRHRAMVMLVERLEGWAITKARGDDVTVVFERPPSTAIPS 60
+RWIVD MNVIGSRPDGWW+DR AMV L +LE WA A VTVVFE+PPS I S
Sbjct 1 MRWIVDAMNVIGSRPDGWWKDRGAAMVRLTRQLEQWA--TAEHQRVTVVFEKPPSPPISS 58
Query 61 SVVEVAHAPKAAANSADDEIVRLVRSGAQPQEIRVVTSDKALTDRVRDLGAAVYPAERFR 120
VV +A AP+A A+SADDEIVRLVR+ P +I VVTSD L RV + GAA PA RFR
Sbjct 59 EVVGIAAAPRAGADSADDEIVRLVRADDCPHDIIVVTSDLGLAQRVTEAGAASLPASRFR 118
Query 121 DLID 124
DL++
Sbjct 119 DLLE 122
>gi|315445253|ref|YP_004078132.1| hypothetical protein Mspyr1_36910 [Mycobacterium sp. Spyr1]
gi|315263556|gb|ADU00298.1| hypothetical protein Mspyr1_36910 [Mycobacterium sp. Spyr1]
Length=124
Score = 139 bits (350), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 74/126 (59%), Positives = 88/126 (70%), Gaps = 2/126 (1%)
Query 1 VRWIVDGMNVIGSRPDGWWRDRHRAMVMLVERLEGWAITKARGDDVTVVFERPPSTAIPS 60
+RWIVDGMNVIG RPDGWWRDRH AM LV LE WA+ A DVTVVFE PP+ I S
Sbjct 1 MRWIVDGMNVIGCRPDGWWRDRHGAMTTLVANLERWAL--AEDADVTVVFEGPPAPPIDS 58
Query 61 SVVEVAHAPKAAANSADDEIVRLVRSGAQPQEIRVVTSDKALTDRVRDLGAAVYPAERFR 120
+V+ VAH +A NSADDEIV ++ S +P + V TSD+ L +RVR V AERFR
Sbjct 59 TVITVAHPRVSAPNSADDEIVTMIGSDPRPGRVLVATSDRTLAERVRSAHGEVCSAERFR 118
Query 121 DLIDPR 126
+LI+PR
Sbjct 119 ELIEPR 124
>gi|118468405|ref|YP_887772.1| hypothetical protein MSMEG_3467 [Mycobacterium smegmatis str.
MC2 155]
gi|118169692|gb|ABK70588.1| conserved hypothetical protein [Mycobacterium smegmatis str.
MC2 155]
Length=136
Score = 134 bits (336), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 77/124 (63%), Positives = 87/124 (71%), Gaps = 4/124 (3%)
Query 1 VRWIVDGMNVIGSRPDGWWRDRHRAMVMLVERLEGWAITKARGDDVTVVFERPPSTAIPS 60
VRWIVDGMNVIGSRPDGWWRDR AM LV +LE WA A G VTVVFE P + I S
Sbjct 8 VRWIVDGMNVIGSRPDGWWRDRRGAMARLVAQLERWA--SAEGAHVTVVFEAPTTPPIES 65
Query 61 SVVEVAHAPKAAANSADDEIVRLVRSGAQPQEIRVVTSDKALTDRVRDLGAAVYPAERFR 120
VVEV HAP +A NSADDEIVRL+ +G ++ VVTSD+ L +RVR GA V A FR
Sbjct 66 RVVEVTHAPASAPNSADDEIVRLLAAGR--SDVTVVTSDRGLAERVRAAGADVRSASGFR 123
Query 121 DLID 124
D I+
Sbjct 124 DRIE 127
>gi|284045393|ref|YP_003395733.1| hypothetical protein Cwoe_3941 [Conexibacter woesei DSM 14684]
gi|283949614|gb|ADB52358.1| conserved hypothetical protein [Conexibacter woesei DSM 14684]
Length=124
Score = 120 bits (300), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 71/124 (58%), Positives = 87/124 (71%), Gaps = 2/124 (1%)
Query 1 VRWIVDGMNVIGSRPDGWWRDRHRAMVMLVERLEGWAITKARGDDVTVVFERPPSTAIPS 60
+RW VDGMNVIG+RPD WWRDRH AMV LV+ LE WA G+DVTVVFE PP I S
Sbjct 1 MRWYVDGMNVIGTRPDAWWRDRHAAMVRLVDLLERWAADS--GEDVTVVFEHPPRPPIRS 58
Query 61 SVVEVAHAPKAAANSADDEIVRLVRSGAQPQEIRVVTSDKALTDRVRDLGAAVYPAERFR 120
+V+EVAHAP+A A+SADDEI+R + + Q VVTSD+ L D+ GAAV + FR
Sbjct 59 TVIEVAHAPRARADSADDEIMRRLAADPQRASAWVVTSDRWLADQAHAAGAAVESSAAFR 118
Query 121 DLID 124
D ++
Sbjct 119 DRLE 122
>gi|336116200|ref|YP_004570966.1| hypothetical protein MLP_05490 [Microlunatus phosphovorus NM-1]
gi|334683978|dbj|BAK33563.1| hypothetical protein MLP_05490 [Microlunatus phosphovorus NM-1]
Length=140
Score = 70.5 bits (171), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 47/114 (42%), Positives = 61/114 (54%), Gaps = 8/114 (7%)
Query 4 IVDGMNVIGSRPDGWWRDRHRAMVMLVERLEGWAITKARGDD-VTVVFERPPSTAIPSSV 62
+VDG NV+GSRPDGWWRDR A L +L+ + + +G V +V E +P V
Sbjct 18 VVDGANVVGSRPDGWWRDRPGAAARLHGQLQQYLDEEPQGASRVILVLEGRARAGVPEGV 77
Query 63 ---VEVAHAPKAAANSADDEIVRLVRSGAQPQEIRVVTSDKALTDRVRDLGAAV 113
+EV HAP DD IV VR + VVT+D+ L RV+ LGA V
Sbjct 78 TGSLEVVHAP----GEGDDTIVDEVRLALTGGTVVVVTADRGLAARVQHLGATV 127
>gi|239991565|ref|ZP_04712229.1| hypothetical protein SrosN1_29957 [Streptomyces roseosporus NRRL
11379]
gi|291448565|ref|ZP_06587955.1| conserved hypothetical protein [Streptomyces roseosporus NRRL
15998]
gi|291351512|gb|EFE78416.1| conserved hypothetical protein [Streptomyces roseosporus NRRL
15998]
Length=131
Score = 64.7 bits (156), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/112 (42%), Positives = 57/112 (51%), Gaps = 8/112 (7%)
Query 4 IVDGMNVIGSRPDGWWRDRHRAMVMLVERLEGWAITKARG----DDVTVVFERPPSTAIP 59
IVDG NV+GS PDGWWRDRH A V L +RL +A G ++ +V E
Sbjct 10 IVDGANVVGSVPDGWWRDRHGAAVRLRDRLVPYASAGLPGVPGPVEIVLVVEGAARGVDS 69
Query 60 SSVVEVAHAPKAAANSADDEIVRLVRSGAQPQEIRVVTSDKALTDRVRDLGA 111
+ V VA AP S DD I L + +E VVT+D+ L RV GA
Sbjct 70 VAGVRVASAP----GSGDDLIAELAAAAGPDRECVVVTADRGLRQRVEAYGA 117
>gi|284028550|ref|YP_003378481.1| hypothetical protein Kfla_0561 [Kribbella flavida DSM 17836]
gi|283807843|gb|ADB29682.1| hypothetical protein Kfla_0561 [Kribbella flavida DSM 17836]
Length=174
Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/135 (37%), Positives = 61/135 (46%), Gaps = 23/135 (17%)
Query 4 IVDGMNVIGSRPDGWWRDR----HRAMVMLVERLEGWAITKARGDDVTVVFERP------ 53
+VD NVIGSRPDGWW DR HR + L L G I D+ V+ E
Sbjct 49 VVDAANVIGSRPDGWWHDRAGAAHRLLTSLAACLAGPGIHT----DIIVILEGAARAAAD 104
Query 54 -PSTAIPSSVVEVAHAPKAAANSADDEIVRLVRSGAQPQEIR---VVTSDKALTDRVRDL 109
P PS++ V A S DD IV +V + Q R V+T+D+ L RV L
Sbjct 105 EPVADTPSTLHVV-----LAKGSGDDTIVEVVTTALQQHPDRPTTVITADRGLRSRVEPL 159
Query 110 GAAVYPAERFRDLID 124
GAA L+D
Sbjct 160 GAATAGPSHLWSLLD 174
>gi|262202689|ref|YP_003273897.1| hypothetical protein Gbro_2787 [Gordonia bronchialis DSM 43247]
gi|262086036|gb|ACY22004.1| hypothetical protein Gbro_2787 [Gordonia bronchialis DSM 43247]
Length=129
Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/112 (42%), Positives = 61/112 (55%), Gaps = 9/112 (8%)
Query 4 IVDGMNVIGSRPDGWWRDRHRAMVMLVERLEGWAITKARG----DDVTVVFERPPSTAIP 59
+VD NV+GS PDGWWRDR A + L +RL +T G DV +V E
Sbjct 13 VVDAANVVGSVPDGWWRDRRGAALRLRDRLAPLTVTGLAGVPGPLDVVLVVEGQARGVES 72
Query 60 SSVVEVAHAPKAAANSADDEIVRLVRSGAQPQEIRVVTSDKALTDRVRDLGA 111
S+ V V AP S DD IV +V +G +++ VVT+D+ L RVR +GA
Sbjct 73 SADVRVVTAP----GSGDDTIVDVV-AGQHDRQVVVVTADRELQRRVRAVGA 119
>gi|302541903|ref|ZP_07294245.1| conserved hypothetical protein [Streptomyces hygroscopicus ATCC
53653]
gi|302459521|gb|EFL22614.1| conserved hypothetical protein [Streptomyces himastatinicus ATCC
53653]
Length=134
Score = 61.2 bits (147), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/123 (40%), Positives = 61/123 (50%), Gaps = 16/123 (13%)
Query 4 IVDGMNVIGSRPDGWWRDRHRAMVMLVERLEGWAITKA--RGD----------DVTVVFE 51
+VD NV+GS PDGWWRDRH A L +RL A++ R D D+ +V E
Sbjct 9 VVDAANVVGSVPDGWWRDRHGAAERLRDRLGAVAVSGVPERADVPEWARQPPLDIVLVVE 68
Query 52 RPPSTAIPSSVVEVAHAPKAAANSADDEIVRLVRSGAQPQEIRVVTSDKALTDRVRDLGA 111
P V V AP SADD IV LV + + VVT+D+ L +RV LGA
Sbjct 69 GAARGVEPVEGVRVEAAP----GSADDLIVDLVAAREPGRPCLVVTADRELRERVTALGA 124
Query 112 AVY 114
V
Sbjct 125 EVV 127
>gi|291301203|ref|YP_003512481.1| hypothetical protein Snas_3731 [Stackebrandtia nassauensis DSM
44728]
gi|290570423|gb|ADD43388.1| hypothetical protein Snas_3731 [Stackebrandtia nassauensis DSM
44728]
Length=132
Score = 60.8 bits (146), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/122 (38%), Positives = 55/122 (46%), Gaps = 13/122 (10%)
Query 4 IVDGMNVIGSRPDGWWRDRHRAMVMLVERLEGWAITKARGD---------DVTVVFERPP 54
+VD NV+GSRPDGWWRDR A L +RL G R ++ +V E
Sbjct 11 VVDAANVVGSRPDGWWRDRAGATARLRDRLAGLHEQGLRAGPDWARRPPLEIVLVTEGRA 70
Query 55 STAIPSSVVEVAHAPKAAANSADDEIVRLVRSGAQPQEIRVVTSDKALTDRVRDLGAAVY 114
S V V AP S DD I RLV ++ VVTSD+ L RV G V
Sbjct 71 RGVEASDTVGVVEAP----GSGDDAIARLVAETTPHRQCLVVTSDRGLRRRVEAAGGQVT 126
Query 115 PA 116
A
Sbjct 127 GA 128
>gi|158313096|ref|YP_001505604.1| hypothetical protein Franean1_1244 [Frankia sp. EAN1pec]
gi|158108501|gb|ABW10698.1| conserved hypothetical protein [Frankia sp. EAN1pec]
Length=197
Score = 60.8 bits (146), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 62/176 (36%), Positives = 75/176 (43%), Gaps = 59/176 (33%)
Query 1 VRWIVDGMNVIGSRPDGWWRDR-------HRAMVMLVER-----------------LEGW 36
+ W+VD NVIG+RPDGWWRDR HR ++ L+ R LEG
Sbjct 20 LTWVVDAANVIGARPDGWWRDRSAAADRLHRDILALLARTVGHRDRADGPSRVLLVLEGA 79
Query 37 A---------------ITKARGDDVTVVFERPPSTAIPSSV-------------VEVAHA 68
A T GD T E P +PS + + V HA
Sbjct 80 ARAGVPAGPSTPKFVPPTVGTGDISTGQSEGQPPL-VPSELKGPLPGMASEPPRLLVIHA 138
Query 69 PKAAANSADDEIVRLVRSGAQPQEIRVVTSDKALTDRVRDLGAAVYPAERFRDLID 124
P DD IV VR+ A P VVTSD+AL DRVR LGA V + RD +D
Sbjct 139 PAG----GDDAIVDAVRTTAGPT--LVVTSDRALGDRVRVLGARVAGSRWLRDRLD 188
>gi|291454864|ref|ZP_06594254.1| conserved hypothetical protein [Streptomyces albus J1074]
gi|291357813|gb|EFE84715.1| conserved hypothetical protein [Streptomyces albus J1074]
Length=133
Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/113 (44%), Positives = 57/113 (51%), Gaps = 10/113 (8%)
Query 4 IVDGMNVIGSRPDGWWRDRHRAMVMLVERL-----EGWAITKARGDDVTVVFERPPSTAI 58
+VDG NV+GS PDGWWRDR A L +RL EG A A +V +V E
Sbjct 14 VVDGANVVGSVPDGWWRDRRGAAERLRDRLVRVAEEGVA-EVAGPVEVVLVVEGAARGVE 72
Query 59 PSSVVEVAHAPKAAANSADDEIVRLVRSGAQPQEIRVVTSDKALTDRVRDLGA 111
P V V AP S DD IV + S A QE VVT+D+ L RV GA
Sbjct 73 PVPGVRVESAP----GSGDDHIVAVAASAAPGQECVVVTADRELRGRVAAHGA 121
>gi|336179417|ref|YP_004584792.1| hypothetical protein FsymDg_3592 [Frankia symbiont of Datisca
glomerata]
gi|334860397|gb|AEH10871.1| hypothetical protein FsymDg_3592 [Frankia symbiont of Datisca
glomerata]
Length=153
Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/147 (34%), Positives = 65/147 (45%), Gaps = 27/147 (18%)
Query 3 WIVDGMNVIGSRPDGWWRDRHRAMVMLVERLEGWAITK--------ARGDD----VTVVF 50
WIVD NVIG+RPDGWWRDR A + L E L T A G+D V +V
Sbjct 6 WIVDAANVIGARPDGWWRDRAGAALRLHEHLSALCQTGFEASTPRAAGGEDLPTEVVLVL 65
Query 51 ERPPSTAIPSSV-------------VEVAHAPKAAANSADDEIVRLVRSGAQPQEIRVVT 97
E P + +S + V HAP ++ + V VR Q + V+T
Sbjct 66 EGPARAGVAASGRPGGGDPGNRAARLVVVHAPGPGDDTVVEAAVEAVRR--QCGAVVVIT 123
Query 98 SDKALTDRVRDLGAAVYPAERFRDLID 124
+D+AL RV +GA L+D
Sbjct 124 ADRALRGRVHAVGATTAGPGWLWALLD 150
>gi|256380949|ref|YP_003104609.1| hypothetical protein Amir_6968 [Actinosynnema mirum DSM 43827]
gi|255925252|gb|ACU40763.1| hypothetical protein Amir_6968 [Actinosynnema mirum DSM 43827]
Length=122
Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/114 (43%), Positives = 61/114 (54%), Gaps = 13/114 (11%)
Query 4 IVDGMNVIGSRPDGWWRDRHRAMVMLVERL-----EGWAITKARGDDVTVVFERPPST-A 57
+VDG NV+GS PDGWWRDR A L + L EG + + V VV R +
Sbjct 7 VVDGANVVGSVPDGWWRDRAAAAERLRDSLVRVSTEGVSPLPGPLEVVLVVEGRAKHVES 66
Query 58 IPSSVVEVAHAPKAAANSADDEIVRLVRSGAQPQEIRVVTSDKALTDRVRDLGA 111
+P V A A S DD+IV LV + A P+ VVT+D+ L DRVR LGA
Sbjct 67 VPGVHVVAAEA------SGDDKIVALV-AEAAPRPCTVVTADRELKDRVRALGA 113
>gi|296129261|ref|YP_003636511.1| hypothetical protein Cfla_1414 [Cellulomonas flavigena DSM 20109]
gi|296021076|gb|ADG74312.1| conserved hypothetical protein [Cellulomonas flavigena DSM 20109]
Length=137
Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/118 (40%), Positives = 60/118 (51%), Gaps = 14/118 (11%)
Query 1 VRWIVDGMNVIGSRPDGWWRDRHRAMVMLVERLEGWAITKARGDD--------VTVVFE- 51
V +VD NV+GSRPDGWWRDR A L++RL G T A G D V VV E
Sbjct 9 VVLVVDAANVVGSRPDGWWRDRAGAAARLLDRLAGVVATTAPGPDGGDVRLARVEVVLEG 68
Query 52 RPPSTAIPSSVVEVAHAPKAAANSADDEIVRLVRSGAQPQEIRVVTSDKALTDRVRDL 109
R A P+ V H A + D E+VR+ P + VVT+D+ L R+ D+
Sbjct 69 RARDAAAPAVPGLVVH---RAPHDGDTEVVRVAEEVDAP--VLVVTADQGLRMRLGDV 121
>gi|290956593|ref|YP_003487775.1| hypothetical protein SCAB_20971 [Streptomyces scabiei 87.22]
gi|260646119|emb|CBG69212.1| hypothetical protein SCAB_20971 [Streptomyces scabiei 87.22]
Length=124
Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/111 (41%), Positives = 57/111 (52%), Gaps = 5/111 (4%)
Query 4 IVDGMNVIGSRPDGWWRDRHRAMVMLVERLEGWAI-TKARGDDVTVVFERPPSTAIPSSV 62
IVD NV+GS PDGWWRDR A L +RL + + ++ +V E P
Sbjct 8 IVDAANVVGSVPDGWWRDRRGAAERLRDRLARDGVPGREEPVELVLVVEGAARGVEPVPG 67
Query 63 VEVAHAPKAAANSADDEIVRLVRSGAQPQEIRVVTSDKALTDRVRDLGAAV 113
V V AP +S DD IV LV A + VVT+D+ L RV +LGA V
Sbjct 68 VRVEAAP----HSGDDRIVELVAEEAHDRPCLVVTADRELRRRVGELGAEV 114
>gi|159037903|ref|YP_001537156.1| hypothetical protein Sare_2307 [Salinispora arenicola CNS-205]
gi|157916738|gb|ABV98165.1| conserved hypothetical protein [Salinispora arenicola CNS-205]
Length=134
Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/127 (40%), Positives = 63/127 (50%), Gaps = 3/127 (2%)
Query 4 IVDGMNVIGSRPDGWWRDRHRAMVMLVERLEGWAITKARGDDVTVVFERPPSTAIPSSVV 63
IVD NV+GSRPDGWWRDR A V L + L A + + V V
Sbjct 8 IVDAANVVGSRPDGWWRDRAGATVRLRDSLARLAGSGVPPELPPPVEVVLVVEGAARKVP 67
Query 64 EVAHAPKAAAN-SADDEIVRLVRSGAQPQEIRVVTSDKALTDRVRDLGAAVY-PAERFRD 121
V+ AA S DD +V LV + Q + + VVT+D+ L +RV GA VY P
Sbjct 68 PVSGVRVVAAERSGDDAMVDLVATNPQRRRV-VVTADRELRERVTRRGAEVYGPRWLTGR 126
Query 122 LIDPRGS 128
L+DP GS
Sbjct 127 LVDPHGS 133
>gi|329940174|ref|ZP_08289456.1| hypothetical protein SGM_4948 [Streptomyces griseoaurantiacus
M045]
gi|329301000|gb|EGG44896.1| hypothetical protein SGM_4948 [Streptomyces griseoaurantiacus
M045]
Length=126
Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/115 (41%), Positives = 59/115 (52%), Gaps = 9/115 (7%)
Query 4 IVDGMNVIGSRPDGWWRDRHRAMVMLVERLEGWAITKARG----DDVTVVFERPPSTAIP 59
+VD NV+GS PDGWWRDR A L + L G T G ++ +V E P
Sbjct 5 VVDAANVVGSVPDGWWRDRRGAAERLRDALAGRGGTGLAGWAPPVEIVMVVEGAARGVEP 64
Query 60 SSVVEVAHAPKAAANSADDEIVRLVRSGAQPQEIRVVTSDKALTDRVRDLGAAVY 114
V V +AAA S DD IV +VR+ A + VVT+D+ L RV LGA V
Sbjct 65 VPGVRV----EAAAGSGDDTIVEVVRAAAG-RRCLVVTADRELRRRVGALGAEVV 114
>gi|330468568|ref|YP_004406311.1| hypothetical protein VAB18032_23055 [Verrucosispora maris AB-18-032]
gi|328811539|gb|AEB45711.1| hypothetical protein VAB18032_23055 [Verrucosispora maris AB-18-032]
Length=125
Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 58/115 (51%), Gaps = 8/115 (6%)
Query 4 IVDGMNVIGSRPDGWWRDRHRAMVMLVERLEGWAITKARGDDVTVVFERPPSTAIPSSVV 63
IVD NV+GSRPDGWWRDR A L + L +G + + +
Sbjct 8 IVDAANVVGSRPDGWWRDRAGATARLRDTL---VPLGGQGVPPELPPPVEVVLVVEGAAR 64
Query 64 EVAHAPK----AAANSADDEIVRLVRSGAQPQEIRVVTSDKALTDRVRDLGAAVY 114
EV +AA S DD +V LV +GA + VVT+D+AL DRV LGA VY
Sbjct 65 EVPGVDGVRVVSAAGSGDDAVVELV-AGAGDRRRLVVTADRALRDRVTVLGAEVY 118
>gi|21224349|ref|NP_630128.1| hypothetical protein SCO6015 [Streptomyces coelicolor A3(2)]
gi|3169029|emb|CAA19227.1| hypothetical protein SC1C3.03c [Streptomyces coelicolor A3(2)]
Length=125
Score = 57.8 bits (138), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/111 (40%), Positives = 55/111 (50%), Gaps = 5/111 (4%)
Query 4 IVDGMNVIGSRPDGWWRDRHRAMVMLVERLEGWAITKARGD-DVTVVFERPPSTAIPSSV 62
+VD NV+GS PDGWWRDR A L +RL + G D+ +V E
Sbjct 10 VVDAANVVGSVPDGWWRDRRGAAERLRDRLAADGVPGRAGPVDIVLVVEGAARGVESVPG 69
Query 63 VEVAHAPKAAANSADDEIVRLVRSGAQPQEIRVVTSDKALTDRVRDLGAAV 113
V V AP S DD +V LV A + + VVT+D+ L RV LGA V
Sbjct 70 VRVESAP----GSGDDHMVGLVARAADDRPVLVVTADRELRRRVTGLGAEV 116
>gi|289768344|ref|ZP_06527722.1| conserved hypothetical protein [Streptomyces lividans TK24]
gi|289698543|gb|EFD65972.1| conserved hypothetical protein [Streptomyces lividans TK24]
Length=125
Score = 57.4 bits (137), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/111 (40%), Positives = 55/111 (50%), Gaps = 5/111 (4%)
Query 4 IVDGMNVIGSRPDGWWRDRHRAMVMLVERLEGWAITKARGD-DVTVVFERPPSTAIPSSV 62
+VD NV+GS PDGWWRDR A L +RL + G D+ +V E
Sbjct 10 VVDAANVVGSVPDGWWRDRRGAAERLRDRLAADGVPGRAGPVDIVLVVEGAARGVESVPG 69
Query 63 VEVAHAPKAAANSADDEIVRLVRSGAQPQEIRVVTSDKALTDRVRDLGAAV 113
V V AP S DD +V LV A + + VVT+D+ L RV LGA V
Sbjct 70 VRVESAP----GSGDDHMVGLVARAADDRPVLVVTADRELRRRVTGLGAEV 116
>gi|302554882|ref|ZP_07307224.1| conserved hypothetical protein [Streptomyces viridochromogenes
DSM 40736]
gi|302472500|gb|EFL35593.1| conserved hypothetical protein [Streptomyces viridochromogenes
DSM 40736]
Length=123
Score = 57.4 bits (137), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/111 (40%), Positives = 58/111 (53%), Gaps = 6/111 (5%)
Query 4 IVDGMNVIGSRPDGWWRDRHRAMVMLVERLEGWAITKARGD-DVTVVFERPPSTAIPSSV 62
+VD NV+GS PDGWWRDR A L +RL + G +V +V E
Sbjct 10 VVDAANVVGSVPDGWWRDRRGAAERLRDRLAADGVPGVSGAVEVVLVVEGAARGVESVPG 69
Query 63 VEVAHAPKAAANSADDEIVRLVRSGAQPQEIRVVTSDKALTDRVRDLGAAV 113
V V+ AP S DD IV +V S + + + VVT+D+ L RV +LGA V
Sbjct 70 VRVSSAP----GSGDDHIVEVVASAGE-RAVLVVTADRELRRRVGELGAEV 115
>gi|302867373|ref|YP_003836010.1| hypothetical protein Micau_2900 [Micromonospora aurantiaca ATCC
27029]
gi|302570232|gb|ADL46434.1| hypothetical protein Micau_2900 [Micromonospora aurantiaca ATCC
27029]
Length=125
Score = 57.0 bits (136), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/116 (44%), Positives = 59/116 (51%), Gaps = 12/116 (10%)
Query 4 IVDGMNVIGSRPDGWWRDRHRAMVMLVERL-----EGWAITKARGDDVTVVFERPPSTAI 58
IVDG NV+GSRPDGWWRDR A V L + L G V +V E
Sbjct 8 IVDGANVVGSRPDGWWRDRAGAAVRLRDALAPVGEAGVPPELPPPVQVVLVVEGAARHVA 67
Query 59 PSSVVEVAHAPKAAANSADDEIVRLVRSGAQPQEIR-VVTSDKALTDRVRDLGAAV 113
P+ VEV AP S DD +V LV A P R VVT+D+ L +RV LGA V
Sbjct 68 PAPGVEVVSAP----GSGDDTMVELV--AAAPDRRRVVVTADRELRERVTALGAEV 117
>gi|291436588|ref|ZP_06575978.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC
14672]
gi|291339483|gb|EFE66439.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC
14672]
Length=123
Score = 57.0 bits (136), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/111 (42%), Positives = 57/111 (52%), Gaps = 6/111 (5%)
Query 4 IVDGMNVIGSRPDGWWRDRHRAMVMLVERLEGWAITKARGD-DVTVVFERPPSTAIPSSV 62
IVD NV+GS PDGWWRDR A L +RL + RG ++ +V E
Sbjct 10 IVDAANVVGSVPDGWWRDRRGAAERLRDRLASDGLPGRRGPVEIVLVVEGAARGVESVPG 69
Query 63 VEVAHAPKAAANSADDEIVRLVRSGAQPQEIRVVTSDKALTDRVRDLGAAV 113
V V AP S DD +V LV GA + + VVT+D+ L RV LGA V
Sbjct 70 VRVESAP----GSGDDHLVALV-DGAGDRPVLVVTADRELRRRVTALGADV 115
>gi|345009944|ref|YP_004812298.1| hypothetical protein Strvi_2293 [Streptomyces violaceusniger
Tu 4113]
gi|344036293|gb|AEM82018.1| hypothetical protein Strvi_2293 [Streptomyces violaceusniger
Tu 4113]
Length=135
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/124 (38%), Positives = 59/124 (48%), Gaps = 20/124 (16%)
Query 4 IVDGMNVIGSRPDGWWRDRHRAMVMLVERL--------------EGWAITKARGDDVTVV 49
+VD NVIGS PDGWWRDR A L +RL GWA D+ +V
Sbjct 6 VVDAANVIGSVPDGWWRDRRGAAERLRDRLAVLARTGLPDRPGVPGWATRPPV--DIVMV 63
Query 50 FERPPSTAIPSSVVEVAHAPKAAANSADDEIVRLVRSGAQPQEIRVVTSDKALTDRVRDL 109
E P V V +AP S DD IV++V + + + VVT+D+ L RV L
Sbjct 64 VEGAARGIEPVEGVRVENAP----GSGDDHIVKVVAARDEGRPCLVVTADQELRARVTAL 119
Query 110 GAAV 113
GA V
Sbjct 120 GAQV 123
>gi|315506222|ref|YP_004085109.1| hypothetical protein ML5_5497 [Micromonospora sp. L5]
gi|315412841|gb|ADU10958.1| hypothetical protein ML5_5497 [Micromonospora sp. L5]
Length=125
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/116 (44%), Positives = 59/116 (51%), Gaps = 12/116 (10%)
Query 4 IVDGMNVIGSRPDGWWRDRHRAMVMLVERL-----EGWAITKARGDDVTVVFERPPSTAI 58
IVDG NV+GSRPDGWWRDR A V L + L G V +V E
Sbjct 8 IVDGANVVGSRPDGWWRDRAGAAVRLRDALVPVGEAGVPPELPPPVQVVLVVEGAARHVA 67
Query 59 PSSVVEVAHAPKAAANSADDEIVRLVRSGAQPQEIR-VVTSDKALTDRVRDLGAAV 113
P+ VEV AP S DD +V LV A P R VVT+D+ L +RV LGA V
Sbjct 68 PAPGVEVVSAP----GSGDDTMVELV--AAAPDRRRVVVTADRELRERVTALGAEV 117
>gi|294815674|ref|ZP_06774317.1| Hypothetical protein SCLAV_4843 [Streptomyces clavuligerus ATCC
27064]
gi|326444021|ref|ZP_08218755.1| hypothetical protein SclaA2_23284 [Streptomyces clavuligerus
ATCC 27064]
gi|294328273|gb|EFG09916.1| Hypothetical protein SCLAV_4843 [Streptomyces clavuligerus ATCC
27064]
Length=131
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/114 (41%), Positives = 57/114 (50%), Gaps = 9/114 (7%)
Query 4 IVDGMNVIGSRPDGWWRDRHRAMVMLVERLEGWAITKARG----DDVTVVFERPPSTAIP 59
IVDG NV+GS PDGWWRDR A + L +RL +A G ++ +V E
Sbjct 14 IVDGANVVGSVPDGWWRDRRGAALRLRDRLAQYAEPGVEGVPGPLEIVLVVEGAARGTGS 73
Query 60 SSVVEVAHAPKAAANSADDEIVRLVRSGAQPQEIRVVTSDKALTDRVRDLGAAV 113
V VA AP S DD I L R+ A + VVT+D+ L RV GA V
Sbjct 74 VPGVRVADAP----GSGDDLIAELARAAAH-RPCVVVTADRELRRRVLAEGARV 122
>gi|302532432|ref|ZP_07284774.1| conserved hypothetical protein [Streptomyces sp. C]
gi|302441327|gb|EFL13143.1| conserved hypothetical protein [Streptomyces sp. C]
Length=126
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/109 (42%), Positives = 56/109 (52%), Gaps = 6/109 (5%)
Query 4 IVDGMNVIGSRPDGWWRDRHRAMVMLVERLEGWAITKAR-GDDVTVVFERPPSTAIPSSV 62
IVD NV+GS PDGWWRDR A L +RL R G++V +V E
Sbjct 10 IVDAANVVGSVPDGWWRDRRGAAERLRDRLAERTDPGGRGGEEVILVVEGAARGIASVPG 69
Query 63 VEVAHAPKAAANSADDEIVRLVRSGAQPQEIRVVTSDKALTDRVRDLGA 111
V V AP S DD IV L + A + VVT+D+AL +RV+ GA
Sbjct 70 VRVDSAP----GSGDDRIVELAAAHAG-RPCVVVTADRALRERVKAYGA 113
>gi|238064495|ref|ZP_04609204.1| hypothetical protein MCAG_05461 [Micromonospora sp. ATCC 39149]
gi|237886306|gb|EEP75134.1| hypothetical protein MCAG_05461 [Micromonospora sp. ATCC 39149]
Length=142
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/123 (40%), Positives = 58/123 (48%), Gaps = 24/123 (19%)
Query 4 IVDGMNVIGSRPDGWWRDRHRAMVMLVERLEGWAITKARGDDVTVVFERPPSTAIPSSVV 63
IVD NV+GSRPDGWWRDR A L + L A + PP A P+ VV
Sbjct 25 IVDAANVVGSRPDGWWRDRAGAAARLRDALVPLAESGV-----------PPQLAGPAEVV 73
Query 64 EVAHAPK------------AAANSADDEIVRLVRSGAQPQEIRVVTSDKALTDRVRDLGA 111
V AA S DD IV LV + A + + VVT+D+ L RV LGA
Sbjct 74 LVVEGAARGVPAVPGVRVVAAPGSGDDTIVDLVGAAAGRRRL-VVTADRELRARVGVLGA 132
Query 112 AVY 114
V+
Sbjct 133 EVH 135
>gi|226359645|ref|YP_002777423.1| hypothetical protein ROP_02310 [Rhodococcus opacus B4]
gi|226238130|dbj|BAH48478.1| hypothetical protein [Rhodococcus opacus B4]
Length=137
Score = 55.5 bits (132), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/111 (37%), Positives = 58/111 (53%), Gaps = 3/111 (2%)
Query 4 IVDGMNVIGSRPDGWWRDRHRAMVMLVERLEGWAITKARGDDVTVVFERPPSTAIPSSVV 63
+VD NV+GSRPDGWWRDR A L+ +L+ + +V VV E A+
Sbjct 10 VVDAANVVGSRPDGWWRDRAGAARRLLVQLDALEQHLDQPAEVVVVIEGAAKAAVAGDPN 69
Query 64 EVAHAPK--AAANSADDEIVRLVRSGAQPQ-EIRVVTSDKALTDRVRDLGA 111
+ + +A S DD IV +V + + +I VVT+D+ L RV LGA
Sbjct 70 RELNGLRVVSAHGSGDDAIVDVVAAEKDGERQITVVTADRGLRARVEALGA 120
>gi|86742181|ref|YP_482581.1| hypothetical protein Francci3_3499 [Frankia sp. CcI3]
gi|86569043|gb|ABD12852.1| hypothetical protein Francci3_3499 [Frankia sp. CcI3]
Length=183
Score = 55.1 bits (131), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/169 (31%), Positives = 66/169 (40%), Gaps = 52/169 (30%)
Query 3 WIVDGMNVIGSRPDGWWRDRHRAMVMLVERLEGWAITKARG-----------DDVTVVFE 51
W+VDG NVIGSRPDGWWRDR A LV+ + IT+ + + VV E
Sbjct 22 WVVDGANVIGSRPDGWWRDRPGAAGRLVDAISA-RITRPGTHPRPSSRPEWPERIVVVLE 80
Query 52 RPPSTAIPSSVVE----------------------------------VAHAPKAAANSAD 77
+P V V HAP D
Sbjct 81 GAARAGVPEGTVRPGKITPEKVRPADVAPEKGRHVPARADRAAPTIVVVHAP----GHGD 136
Query 78 DEIVRLVRSGAQPQEIRVVTSDKALTDRVRDLGAAVYPAERFRDLIDPR 126
D IV R P + V+TSD+ L R+R LGA V + +L+D R
Sbjct 137 DAIVAAARDAVAP--VVVITSDRQLAGRLRSLGAGVRRSGWLWELLDER 183
>gi|300784360|ref|YP_003764651.1| NTP pyrophosphohydrolase [Amycolatopsis mediterranei U32]
gi|299793874|gb|ADJ44249.1| NTP pyrophosphohydrolase [Amycolatopsis mediterranei U32]
Length=280
Score = 54.3 bits (129), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/130 (34%), Positives = 59/130 (46%), Gaps = 15/130 (11%)
Query 4 IVDGMNVIGSRPDGWWRDRHRAMVMLVERLEGWAITKARGDD---------VTVVFERPP 54
+VD NV+GSRPDGWWRDRH A L ++L A D + +V E
Sbjct 155 VVDAANVVGSRPDGWWRDRHGAAERLRDQLAKLAEAGVPDPDDPAVTWWPRIVLVVEGKA 214
Query 55 STAIPSSVVEVAHAPKAAANSADDEIVRLVRSGAQPQEIRVVTSDKALTDRVRDLGAAVY 114
+ VEV AA D +IV +V Q + V T+D+ L RV LGA++
Sbjct 215 KHVTGTPGVEVV----AADTDGDSKIVEVVAQ--QKARVLVATADRELKRRVEALGASII 268
Query 115 PAERFRDLID 124
R +D
Sbjct 269 GPGTLRTQLD 278
>gi|340525780|gb|AEK40985.1| NTP pyrophosphohydrolase [Amycolatopsis mediterranei S699]
Length=273
Score = 54.3 bits (129), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/130 (34%), Positives = 59/130 (46%), Gaps = 15/130 (11%)
Query 4 IVDGMNVIGSRPDGWWRDRHRAMVMLVERLEGWAITKARGDD---------VTVVFERPP 54
+VD NV+GSRPDGWWRDRH A L ++L A D + +V E
Sbjct 148 VVDAANVVGSRPDGWWRDRHGAAERLRDQLAKLAEAGVPDPDDPAVTWWPRIVLVVEGKA 207
Query 55 STAIPSSVVEVAHAPKAAANSADDEIVRLVRSGAQPQEIRVVTSDKALTDRVRDLGAAVY 114
+ VEV AA D +IV +V Q + V T+D+ L RV LGA++
Sbjct 208 KHVTGTPGVEVV----AADTDGDSKIVEVVAQ--QKARVLVATADRELKRRVEALGASII 261
Query 115 PAERFRDLID 124
R +D
Sbjct 262 GPGTLRTQLD 271
>gi|29828783|ref|NP_823417.1| hypothetical protein SAV_2241 [Streptomyces avermitilis MA-4680]
gi|29605888|dbj|BAC69952.1| hypothetical protein [Streptomyces avermitilis MA-4680]
Length=121
Score = 54.3 bits (129), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/111 (40%), Positives = 54/111 (49%), Gaps = 6/111 (5%)
Query 4 IVDGMNVIGSRPDGWWRDRHRAMVMLVERLEGWAITKARGD-DVTVVFERPPSTAIPSSV 62
I+D NVIGS PDGWWRDR A L +RL + A G ++ +V E
Sbjct 6 IIDAANVIGSVPDGWWRDRRGAAERLRDRLARDGVPGAEGPVEIVLVVEGAARGVESVPG 65
Query 63 VEVAHAPKAAANSADDEIVRLVRSGAQPQEIRVVTSDKALTDRVRDLGAAV 113
V V AP S DD I L A + VVT+D+ L RVR+ GA V
Sbjct 66 VRVESAP----GSGDDRITELAAEAAGRDRL-VVTADRELRRRVRESGAEV 111
>gi|170781729|ref|YP_001710061.1| hypothetical protein CMS_1332 [Clavibacter michiganensis subsp.
sepedonicus]
gi|169156297|emb|CAQ01444.1| conserved hypothetical protein [Clavibacter michiganensis subsp.
sepedonicus]
Length=344
Score = 53.9 bits (128), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/147 (34%), Positives = 67/147 (46%), Gaps = 21/147 (14%)
Query 1 VRWIVDGMNVIGSRPDGWWRDRHRAMVMLVERLEGWAITKARGDD------------VTV 48
V +VD N++GSRPDGWW DR + L+ L+G A D V V
Sbjct 165 VTLVVDTANLLGSRPDGWWHDRAGSTTRLLVELDGLARDGLPAADLGLPGDVRWPEVVAV 224
Query 49 VFERPPSTAIPSSVVEVA----HAPK----AAANSADDEIVRLVRSGAQP-QEIRVVTSD 99
V A+PS + A AP AA D EI+ +V + +++ VVT+D
Sbjct 225 VEGHARDAALPSPAQDAAPPVLRAPGISVVAAPTDGDGEILTVVAAARDAGRDVVVVTAD 284
Query 100 KALTDRVRDLGAAVYPAERFRDLIDPR 126
+ L RV +LGA R R L+D R
Sbjct 285 RGLVARVEELGARATGPGRIRALLDAR 311
Lambda K H
0.319 0.133 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 129391415580
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40