BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv1978
Length=282
Score E
Sequences producing significant alignments: (Bits) Value
gi|15841454|ref|NP_336491.1| hypothetical protein MT2030 [Mycoba... 570 8e-161
gi|15609115|ref|NP_216494.1| hypothetical protein Rv1978 [Mycoba... 569 1e-160
gi|289746079|ref|ZP_06505457.1| conserved hypothetical protein [... 569 2e-160
gi|289574650|ref|ZP_06454877.1| conserved hypothetical protein [... 568 3e-160
gi|31793157|ref|NP_855650.1| hypothetical protein Mb2000 [Mycoba... 567 7e-160
gi|336459411|gb|EGO38353.1| methylase involved in ubiquinone/men... 326 2e-87
gi|41406171|ref|NP_959007.1| hypothetical protein MAP0073c [Myco... 323 2e-86
gi|118465316|ref|YP_879380.1| hypothetical protein MAV_0081 [Myc... 316 2e-84
gi|254773126|ref|ZP_05214642.1| hypothetical protein MaviaA2_003... 276 3e-72
gi|120406416|ref|YP_956245.1| type 11 methyltransferase [Mycobac... 247 1e-63
gi|126437805|ref|YP_001073496.1| type 11 methyltransferase [Myco... 235 6e-60
gi|108801837|ref|YP_642034.1| type 12 methyltransferase [Mycobac... 234 2e-59
gi|118469319|ref|YP_890449.1| hypothetical protein MSMEG_6231 [M... 230 2e-58
gi|317507006|ref|ZP_07964773.1| methyltransferase domain-contain... 224 1e-56
gi|169631773|ref|YP_001705422.1| hypothetical protein MAB_4700c ... 219 4e-55
gi|145221918|ref|YP_001132596.1| type 11 methyltransferase [Myco... 208 8e-52
gi|169631064|ref|YP_001704713.1| hypothetical protein MAB_3985c ... 197 1e-48
gi|326903587|gb|EGE50520.1| hypothetical protein TBPG_01463 [Myc... 178 6e-43
gi|121637871|ref|YP_978094.1| putative methyltransferase [Mycoba... 113 3e-23
gi|78188233|ref|YP_378571.1| hypothetical protein Cag_0252 [Chlo... 68.2 1e-09
gi|189347464|ref|YP_001943993.1| type 12 methyltransferase [Chlo... 59.7 5e-07
gi|343925190|ref|ZP_08764719.1| putative methyltransferase [Gord... 59.7 5e-07
gi|84489411|ref|YP_447643.1| hypothetical protein Msp_0602 [Meth... 58.2 1e-06
gi|339445049|ref|YP_004711053.1| hypothetical protein EGYY_15120... 57.0 3e-06
gi|251796594|ref|YP_003011325.1| methyltransferase type 11 [Paen... 57.0 3e-06
gi|115380548|ref|ZP_01467510.1| ubiquinone/menaquinone biosynthe... 56.6 4e-06
gi|310821604|ref|YP_003953962.1| ubiquinone/menaquinone biosynth... 56.6 5e-06
gi|295111256|emb|CBL28006.1| Methylase involved in ubiquinone/me... 55.8 7e-06
gi|339444090|ref|YP_004710094.1| hypothetical protein EGYY_04800... 55.1 1e-05
gi|298490503|ref|YP_003720680.1| type 11 methyltransferase ['Nos... 55.1 1e-05
gi|198443327|pdb|3DTN|A Chain A, Crystal Structure Of Putative M... 54.7 1e-05
gi|21228735|ref|NP_634657.1| hypothetical protein MM_2633 [Metha... 54.7 1e-05
gi|110597185|ref|ZP_01385474.1| SAM (and some other nucleotide) ... 54.7 2e-05
gi|194335887|ref|YP_002017681.1| type 12 methyltransferase [Pelo... 54.7 2e-05
gi|334339891|ref|YP_004544871.1| type 11 methyltransferase [Desu... 54.3 2e-05
gi|333920124|ref|YP_004493705.1| methyltransferase [Amycolicicoc... 54.3 2e-05
gi|120406460|ref|YP_956289.1| type 11 methyltransferase [Mycobac... 54.3 2e-05
gi|320009021|gb|ADW03871.1| Methyltransferase type 12 [Streptomy... 53.9 2e-05
gi|182436537|ref|YP_001824256.1| putative SAM-dependent methyltr... 53.9 3e-05
gi|326777160|ref|ZP_08236425.1| Methyltransferase type 12 [Strep... 53.1 5e-05
gi|344342520|ref|ZP_08773391.1| hypothetical protein MarpuDRAFT_... 52.0 1e-04
gi|189499476|ref|YP_001958946.1| type 12 methyltransferase [Chlo... 52.0 1e-04
gi|337768093|emb|CCB76806.1| Methyltransferase [Streptomyces cat... 52.0 1e-04
gi|262195167|ref|YP_003266376.1| hypothetical protein Hoch_1937 ... 51.6 1e-04
gi|254409984|ref|ZP_05023764.1| Methyltransferase domain family ... 51.6 1e-04
gi|254414464|ref|ZP_05028230.1| Methyltransferase domain family ... 51.6 1e-04
gi|253701829|ref|YP_003023018.1| methyltransferase type 11 [Geob... 51.6 2e-04
gi|197117416|ref|YP_002137843.1| SAM-dependent methyltransferase... 51.2 2e-04
gi|183981439|ref|YP_001849730.1| hypothetical protein MMAR_1415 ... 50.8 2e-04
gi|334118513|ref|ZP_08492602.1| Methyltransferase type 11 [Micro... 50.4 3e-04
>gi|15841454|ref|NP_336491.1| hypothetical protein MT2030 [Mycobacterium tuberculosis CDC1551]
gi|13881693|gb|AAK46305.1| hypothetical protein MT2030 [Mycobacterium tuberculosis CDC1551]
Length=294
Score = 570 bits (1469), Expect = 8e-161, Method: Compositional matrix adjust.
Identities = 282/282 (100%), Positives = 282/282 (100%), Gaps = 0/282 (0%)
Query 1 MGEANIREQAIATMPRGGPDASWLDRRFQTDALEYLDRDDVPDEVKQKIIGVLDRVGTLT 60
MGEANIREQAIATMPRGGPDASWLDRRFQTDALEYLDRDDVPDEVKQKIIGVLDRVGTLT
Sbjct 13 MGEANIREQAIATMPRGGPDASWLDRRFQTDALEYLDRDDVPDEVKQKIIGVLDRVGTLT 72
Query 61 NLHEKYARIALKLVSDIPNPRILELGAGHGKLSAKILELHPTATVTISDLDPTSVANIAA 120
NLHEKYARIALKLVSDIPNPRILELGAGHGKLSAKILELHPTATVTISDLDPTSVANIAA
Sbjct 73 NLHEKYARIALKLVSDIPNPRILELGAGHGKLSAKILELHPTATVTISDLDPTSVANIAA 132
Query 121 GELGTHPRARTQVIDATAIDGHDHSYDLAVFALAFHHLPPTVACKAIAEATRVGKRFLII 180
GELGTHPRARTQVIDATAIDGHDHSYDLAVFALAFHHLPPTVACKAIAEATRVGKRFLII
Sbjct 133 GELGTHPRARTQVIDATAIDGHDHSYDLAVFALAFHHLPPTVACKAIAEATRVGKRFLII 192
Query 181 DLKRQKPLSFTLSSVLLLPLHLLLLPWSSMRSSMHDGFISALRAYSPSALQTLARAADPG 240
DLKRQKPLSFTLSSVLLLPLHLLLLPWSSMRSSMHDGFISALRAYSPSALQTLARAADPG
Sbjct 193 DLKRQKPLSFTLSSVLLLPLHLLLLPWSSMRSSMHDGFISALRAYSPSALQTLARAADPG 252
Query 241 MQVEILPAPTRLFPPSLAVVFSRSSSAPTESSECSADRQPGE 282
MQVEILPAPTRLFPPSLAVVFSRSSSAPTESSECSADRQPGE
Sbjct 253 MQVEILPAPTRLFPPSLAVVFSRSSSAPTESSECSADRQPGE 294
>gi|15609115|ref|NP_216494.1| hypothetical protein Rv1978 [Mycobacterium tuberculosis H37Rv]
gi|148661787|ref|YP_001283310.1| hypothetical protein MRA_1989 [Mycobacterium tuberculosis H37Ra]
gi|148823192|ref|YP_001287946.1| hypothetical protein TBFG_12009 [Mycobacterium tuberculosis F11]
58 more sequence titles
Length=282
Score = 569 bits (1467), Expect = 1e-160, Method: Compositional matrix adjust.
Identities = 282/282 (100%), Positives = 282/282 (100%), Gaps = 0/282 (0%)
Query 1 MGEANIREQAIATMPRGGPDASWLDRRFQTDALEYLDRDDVPDEVKQKIIGVLDRVGTLT 60
MGEANIREQAIATMPRGGPDASWLDRRFQTDALEYLDRDDVPDEVKQKIIGVLDRVGTLT
Sbjct 1 MGEANIREQAIATMPRGGPDASWLDRRFQTDALEYLDRDDVPDEVKQKIIGVLDRVGTLT 60
Query 61 NLHEKYARIALKLVSDIPNPRILELGAGHGKLSAKILELHPTATVTISDLDPTSVANIAA 120
NLHEKYARIALKLVSDIPNPRILELGAGHGKLSAKILELHPTATVTISDLDPTSVANIAA
Sbjct 61 NLHEKYARIALKLVSDIPNPRILELGAGHGKLSAKILELHPTATVTISDLDPTSVANIAA 120
Query 121 GELGTHPRARTQVIDATAIDGHDHSYDLAVFALAFHHLPPTVACKAIAEATRVGKRFLII 180
GELGTHPRARTQVIDATAIDGHDHSYDLAVFALAFHHLPPTVACKAIAEATRVGKRFLII
Sbjct 121 GELGTHPRARTQVIDATAIDGHDHSYDLAVFALAFHHLPPTVACKAIAEATRVGKRFLII 180
Query 181 DLKRQKPLSFTLSSVLLLPLHLLLLPWSSMRSSMHDGFISALRAYSPSALQTLARAADPG 240
DLKRQKPLSFTLSSVLLLPLHLLLLPWSSMRSSMHDGFISALRAYSPSALQTLARAADPG
Sbjct 181 DLKRQKPLSFTLSSVLLLPLHLLLLPWSSMRSSMHDGFISALRAYSPSALQTLARAADPG 240
Query 241 MQVEILPAPTRLFPPSLAVVFSRSSSAPTESSECSADRQPGE 282
MQVEILPAPTRLFPPSLAVVFSRSSSAPTESSECSADRQPGE
Sbjct 241 MQVEILPAPTRLFPPSLAVVFSRSSSAPTESSECSADRQPGE 282
>gi|289746079|ref|ZP_06505457.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
gi|289758090|ref|ZP_06517468.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
gi|294996908|ref|ZP_06802599.1| hypothetical protein Mtub2_20978 [Mycobacterium tuberculosis
210]
6 more sequence titles
Length=282
Score = 569 bits (1466), Expect = 2e-160, Method: Compositional matrix adjust.
Identities = 281/282 (99%), Positives = 282/282 (100%), Gaps = 0/282 (0%)
Query 1 MGEANIREQAIATMPRGGPDASWLDRRFQTDALEYLDRDDVPDEVKQKIIGVLDRVGTLT 60
MGEANIREQAIATMPRGGPDASWLDRRFQTDALEYLDRDDVPDEVKQKIIGVLDRVGTLT
Sbjct 1 MGEANIREQAIATMPRGGPDASWLDRRFQTDALEYLDRDDVPDEVKQKIIGVLDRVGTLT 60
Query 61 NLHEKYARIALKLVSDIPNPRILELGAGHGKLSAKILELHPTATVTISDLDPTSVANIAA 120
NLHEKYARIALKLVSDIPNPRILELGAGHGKLSAKILELHPTATVTISDLDPTSVANIAA
Sbjct 61 NLHEKYARIALKLVSDIPNPRILELGAGHGKLSAKILELHPTATVTISDLDPTSVANIAA 120
Query 121 GELGTHPRARTQVIDATAIDGHDHSYDLAVFALAFHHLPPTVACKAIAEATRVGKRFLII 180
GELGTHPRARTQVIDATAIDGHDHSYDLAVFALAFHHLPPTVACKAIAEATRVGKRFLII
Sbjct 121 GELGTHPRARTQVIDATAIDGHDHSYDLAVFALAFHHLPPTVACKAIAEATRVGKRFLII 180
Query 181 DLKRQKPLSFTLSSVLLLPLHLLLLPWSSMRSSMHDGFISALRAYSPSALQTLARAADPG 240
DLKRQKPLSFTLSSVLLLPLHLLLLPWSSMRSSMHDGFISALRAY+PSALQTLARAADPG
Sbjct 181 DLKRQKPLSFTLSSVLLLPLHLLLLPWSSMRSSMHDGFISALRAYTPSALQTLARAADPG 240
Query 241 MQVEILPAPTRLFPPSLAVVFSRSSSAPTESSECSADRQPGE 282
MQVEILPAPTRLFPPSLAVVFSRSSSAPTESSECSADRQPGE
Sbjct 241 MQVEILPAPTRLFPPSLAVVFSRSSSAPTESSECSADRQPGE 282
>gi|289574650|ref|ZP_06454877.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
gi|339632016|ref|YP_004723658.1| hypothetical protein MAF_19890 [Mycobacterium africanum GM041182]
gi|289539081|gb|EFD43659.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
gi|339331372|emb|CCC27059.1| conserved hypothetical protein [Mycobacterium africanum GM041182]
Length=282
Score = 568 bits (1464), Expect = 3e-160, Method: Compositional matrix adjust.
Identities = 281/282 (99%), Positives = 281/282 (99%), Gaps = 0/282 (0%)
Query 1 MGEANIREQAIATMPRGGPDASWLDRRFQTDALEYLDRDDVPDEVKQKIIGVLDRVGTLT 60
MGEANIREQAIATMPRGGPDASWLDRRFQTDALEYLDRDDVPDEVKQKIIGVLDRVGTLT
Sbjct 1 MGEANIREQAIATMPRGGPDASWLDRRFQTDALEYLDRDDVPDEVKQKIIGVLDRVGTLT 60
Query 61 NLHEKYARIALKLVSDIPNPRILELGAGHGKLSAKILELHPTATVTISDLDPTSVANIAA 120
NLHEKYARIALKLVSDIPNPRILELGAGHGKLSAKILELHPTATVTISDLDPTSVANIAA
Sbjct 61 NLHEKYARIALKLVSDIPNPRILELGAGHGKLSAKILELHPTATVTISDLDPTSVANIAA 120
Query 121 GELGTHPRARTQVIDATAIDGHDHSYDLAVFALAFHHLPPTVACKAIAEATRVGKRFLII 180
GELGTHPRARTQVID TAIDGHDHSYDLAVFALAFHHLPPTVACKAIAEATRVGKRFLII
Sbjct 121 GELGTHPRARTQVIDTTAIDGHDHSYDLAVFALAFHHLPPTVACKAIAEATRVGKRFLII 180
Query 181 DLKRQKPLSFTLSSVLLLPLHLLLLPWSSMRSSMHDGFISALRAYSPSALQTLARAADPG 240
DLKRQKPLSFTLSSVLLLPLHLLLLPWSSMRSSMHDGFISALRAYSPSALQTLARAADPG
Sbjct 181 DLKRQKPLSFTLSSVLLLPLHLLLLPWSSMRSSMHDGFISALRAYSPSALQTLARAADPG 240
Query 241 MQVEILPAPTRLFPPSLAVVFSRSSSAPTESSECSADRQPGE 282
MQVEILPAPTRLFPPSLAVVFSRSSSAPTESSECSADRQPGE
Sbjct 241 MQVEILPAPTRLFPPSLAVVFSRSSSAPTESSECSADRQPGE 282
>gi|31793157|ref|NP_855650.1| hypothetical protein Mb2000 [Mycobacterium bovis AF2122/97]
gi|31618748|emb|CAD94702.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium bovis AF2122/97]
Length=282
Score = 567 bits (1461), Expect = 7e-160, Method: Compositional matrix adjust.
Identities = 281/282 (99%), Positives = 281/282 (99%), Gaps = 0/282 (0%)
Query 1 MGEANIREQAIATMPRGGPDASWLDRRFQTDALEYLDRDDVPDEVKQKIIGVLDRVGTLT 60
MGEANIREQAIATMPRGGPDASWLDRRFQTDALEYLDRDDVPDEVKQKIIGVLDRVGTLT
Sbjct 1 MGEANIREQAIATMPRGGPDASWLDRRFQTDALEYLDRDDVPDEVKQKIIGVLDRVGTLT 60
Query 61 NLHEKYARIALKLVSDIPNPRILELGAGHGKLSAKILELHPTATVTISDLDPTSVANIAA 120
NLHEKYARIALKLVSDIPNPRILELGAGHGKLSAKILELHPTATVTISDLDPTSVANIAA
Sbjct 61 NLHEKYARIALKLVSDIPNPRILELGAGHGKLSAKILELHPTATVTISDLDPTSVANIAA 120
Query 121 GELGTHPRARTQVIDATAIDGHDHSYDLAVFALAFHHLPPTVACKAIAEATRVGKRFLII 180
GELGTHPRARTQVIDATAIDGH HSYDLAVFALAFHHLPPTVACKAIAEATRVGKRFLII
Sbjct 121 GELGTHPRARTQVIDATAIDGHGHSYDLAVFALAFHHLPPTVACKAIAEATRVGKRFLII 180
Query 181 DLKRQKPLSFTLSSVLLLPLHLLLLPWSSMRSSMHDGFISALRAYSPSALQTLARAADPG 240
DLKRQKPLSFTLSSVLLLPLHLLLLPWSSMRSSMHDGFISALRAYSPSALQTLARAADPG
Sbjct 181 DLKRQKPLSFTLSSVLLLPLHLLLLPWSSMRSSMHDGFISALRAYSPSALQTLARAADPG 240
Query 241 MQVEILPAPTRLFPPSLAVVFSRSSSAPTESSECSADRQPGE 282
MQVEILPAPTRLFPPSLAVVFSRSSSAPTESSECSADRQPGE
Sbjct 241 MQVEILPAPTRLFPPSLAVVFSRSSSAPTESSECSADRQPGE 282
>gi|336459411|gb|EGO38353.1| methylase involved in ubiquinone/menaquinone biosynthesis [Mycobacterium
avium subsp. paratuberculosis S397]
Length=269
Score = 326 bits (835), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 169/265 (64%), Positives = 198/265 (75%), Gaps = 2/265 (0%)
Query 1 MGEANIREQAIATMPRGGPDASWLDRRFQTDALEYLDRDDVPDEVKQKIIGVLDRVGTLT 60
M EA + AIA+MPRGGPDASWLDRR QT+ LEY DR D+PDEVKQ ++ LDR+GT
Sbjct 1 MSEALTVDPAIASMPRGGPDASWLDRRLQTEKLEYTDRYDIPDEVKQTVVAALDRMGTRA 60
Query 61 NLHEKYARIALKLVSDIPNPRILELGAGHGKLSAKILELHPTATVTISDLDPTSVANIAA 120
HE+ AR AL +V+DI NPRILELGAGHGKLSA+IL HPTATVT+SDLDPTSVANIAA
Sbjct 61 GYHERNARTALDIVADIANPRILELGAGHGKLSAEILTSHPTATVTVSDLDPTSVANIAA 120
Query 121 GELGTHPRARTQVIDATAIDGHDHSYDLAVFALAFHHLPPTVACKAIAEATRVGKRFLII 180
G LG PRARTQV+DATAID D SYDL VFA AFHHLPP A +AIAEATR GKRFL+I
Sbjct 121 GPLGADPRARTQVVDATAIDAPDDSYDLVVFAQAFHHLPPATAVRAIAEATRAGKRFLVI 180
Query 181 DLKRQKPLSFTLSSVLLLPL-HLLLLPWSSMRSSMHDGFISALRAYSPSALQTLARAADP 239
DL R + + L+ ++L P +L L S++ MHD +ISALRAYS SA L +AADP
Sbjct 181 DLPRPRSVQLLLTPLILAPFAAVLALVRPSLKHVMHDAYISALRAYSRSAFIALGKAADP 240
Query 240 GMQVEILP-APTRLFPPSLAVVFSR 263
M VE LP + RL P + +VF+R
Sbjct 241 RMGVEFLPLSACRLRPGHVGIVFTR 265
>gi|41406171|ref|NP_959007.1| hypothetical protein MAP0073c [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41394519|gb|AAS02390.1| hypothetical protein MAP_0073c [Mycobacterium avium subsp. paratuberculosis
K-10]
Length=269
Score = 323 bits (829), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 168/265 (64%), Positives = 197/265 (75%), Gaps = 2/265 (0%)
Query 1 MGEANIREQAIATMPRGGPDASWLDRRFQTDALEYLDRDDVPDEVKQKIIGVLDRVGTLT 60
M EA + AIA+MPRGGPDASWLDRR QT+ LEY DR D+PDEVKQ ++ LDR+GT
Sbjct 1 MSEALTVDPAIASMPRGGPDASWLDRRLQTEKLEYTDRYDIPDEVKQTVVAALDRMGTRA 60
Query 61 NLHEKYARIALKLVSDIPNPRILELGAGHGKLSAKILELHPTATVTISDLDPTSVANIAA 120
HE+ AR AL +V+DI NPRILELGAGHGKLSA+IL HPTATVT+SDLDPTSVANIAA
Sbjct 61 GYHERNARTALDIVADIANPRILELGAGHGKLSAEILTSHPTATVTVSDLDPTSVANIAA 120
Query 121 GELGTHPRARTQVIDATAIDGHDHSYDLAVFALAFHHLPPTVACKAIAEATRVGKRFLII 180
G LG PRARTQV+DATAID D SYDL VFA AFHHLPP A +AIAEAT GKRFL+I
Sbjct 121 GPLGADPRARTQVVDATAIDAPDDSYDLVVFAQAFHHLPPATAVRAIAEATHAGKRFLVI 180
Query 181 DLKRQKPLSFTLSSVLLLPL-HLLLLPWSSMRSSMHDGFISALRAYSPSALQTLARAADP 239
DL R + + L+ ++L P +L L S++ MHD +ISALRAYS SA L +AADP
Sbjct 181 DLPRPRSVQLLLTPLILAPFAAVLALVRPSLKHVMHDAYISALRAYSRSAFIALGKAADP 240
Query 240 GMQVEILP-APTRLFPPSLAVVFSR 263
M VE LP + RL P + +VF+R
Sbjct 241 RMGVEFLPLSACRLRPGHVGIVFTR 265
>gi|118465316|ref|YP_879380.1| hypothetical protein MAV_0081 [Mycobacterium avium 104]
gi|118166603|gb|ABK67500.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=269
Score = 316 bits (810), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 169/265 (64%), Positives = 197/265 (75%), Gaps = 2/265 (0%)
Query 1 MGEANIREQAIATMPRGGPDASWLDRRFQTDALEYLDRDDVPDEVKQKIIGVLDRVGTLT 60
M EA + AIA+MPRGGPDASWLDRR QT+ LEY DR D+PDEVKQ ++ LDR+GT
Sbjct 1 MSEALTVDPAIASMPRGGPDASWLDRRLQTEKLEYTDRYDIPDEVKQTVVAALDRMGTRA 60
Query 61 NLHEKYARIALKLVSDIPNPRILELGAGHGKLSAKILELHPTATVTISDLDPTSVANIAA 120
HE+ AR AL +V+DI NPRILELGAGHGKLSA+IL HPTATVT+SDLDPTSVANIAA
Sbjct 61 GYHERNARTALDIVADIANPRILELGAGHGKLSAEILTSHPTATVTVSDLDPTSVANIAA 120
Query 121 GELGTHPRARTQVIDATAIDGHDHSYDLAVFALAFHHLPPTVACKAIAEATRVGKRFLII 180
G LG PRARTQV+DATAID D SYDL VFA AFHHLPP A +AIAEATRVGKRFL+I
Sbjct 121 GPLGADPRARTQVVDATAIDAPDDSYDLVVFAQAFHHLPPATAVRAIAEATRVGKRFLVI 180
Query 181 DLKRQKPLSFTLSSVLLLPLHLLLLPWS-SMRSSMHDGFISALRAYSPSALQTLARAADP 239
DL R + + L+ ++L P L S++ MHD +ISALRAYS SA L +AADP
Sbjct 181 DLPRPRSVQLLLTPLILAPFAAALALVRPSLKHVMHDAYISALRAYSRSAFIALGKAADP 240
Query 240 GMQVEILP-APTRLFPPSLAVVFSR 263
M VE LP + RL P + +VF+R
Sbjct 241 RMGVEFLPLSACRLRPGHVGIVFTR 265
>gi|254773126|ref|ZP_05214642.1| hypothetical protein MaviaA2_00371 [Mycobacterium avium subsp.
avium ATCC 25291]
Length=242
Score = 276 bits (706), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 149/238 (63%), Positives = 175/238 (74%), Gaps = 2/238 (0%)
Query 28 FQTDALEYLDRDDVPDEVKQKIIGVLDRVGTLTNLHEKYARIALKLVSDIPNPRILELGA 87
QT+ LEY DR D+PDEVKQ ++ LDR+GT HE+ AR AL +V+DI NPRILELGA
Sbjct 1 MQTEKLEYTDRYDIPDEVKQTVVAALDRMGTRAGYHERNARTALDIVADIANPRILELGA 60
Query 88 GHGKLSAKILELHPTATVTISDLDPTSVANIAAGELGTHPRARTQVIDATAIDGHDHSYD 147
GHGKLSA+IL HPTATVT+SDLDPTSVANIAAG LG PRARTQV+DATAID D SYD
Sbjct 61 GHGKLSAEILTSHPTATVTVSDLDPTSVANIAAGPLGADPRARTQVVDATAIDAPDDSYD 120
Query 148 LAVFALAFHHLPPTVACKAIAEATRVGKRFLIIDLKRQKPLSFTLSSVLLLPLHLLLLPW 207
L VFA AFHHLPP A +AIAEATRVGKRFL+IDL R + + L+ ++L P L
Sbjct 121 LVVFAQAFHHLPPATAVRAIAEATRVGKRFLVIDLPRPRSVQLLLTPLILAPFAAALALV 180
Query 208 S-SMRSSMHDGFISALRAYSPSALQTLARAADPGMQVEILP-APTRLFPPSLAVVFSR 263
S++ MHD +ISALRAYS SA L +AADP M VE LP + RL P + +VF+R
Sbjct 181 RPSLKHVMHDAYISALRAYSRSAFIALGKAADPRMGVEFLPLSACRLRPGHVGIVFTR 238
>gi|120406416|ref|YP_956245.1| type 11 methyltransferase [Mycobacterium vanbaalenii PYR-1]
gi|119959234|gb|ABM16239.1| Methyltransferase type 11 [Mycobacterium vanbaalenii PYR-1]
Length=244
Score = 247 bits (631), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 135/258 (53%), Positives = 172/258 (67%), Gaps = 22/258 (8%)
Query 14 MPRGGPDASWLDRRFQTDALEYLDRDDVPD----EVKQKIIGVLDRVGTLTNLHEKYARI 69
MPRGGPDAS LDR QTD EYLDRD D + K+ +I LD G + HEK+A+I
Sbjct 1 MPRGGPDASCLDRLLQTDRQEYLDRDSAGDAGLEQTKRSVIRALDWTGEVFGNHEKFAKI 60
Query 70 ALKLVSDIPNPRILELGAGHGKLSAKILELHPTATVTISDLDPTSVANIAAGELGTHPRA 129
AL V+D+ +PRILELGAGHG LS K+LE HP+A +T++D++P SVA IAAG+LG+HPRA
Sbjct 61 ALDEVADVADPRILELGAGHGGLSRKLLEWHPSARLTVTDVEPASVAAIAAGDLGSHPRA 120
Query 130 RTQVIDATAIDGHDHSYDLAVFALAFHHLPPTVACKAIAEATRVGKRFLIIDLKRQKPLS 189
+ +DATA+D D +DLAVFAL+FHHLPP +A +AIAE RV + LIIDL R
Sbjct 121 TVRQMDATALDAADGEFDLAVFALSFHHLPPQLAARAIAEGARVADKLLIIDLPRPPA-- 178
Query 190 FTLSSVLLLPLHLL----LLPWSSMRSSMHDGFISALRAYSPSALQTLARAADPGMQVEI 245
PLH+L +LPW+ + +HDG IS+LRAYSPSAL+ LA ADP + +E+
Sbjct 179 ---------PLHVLRLAAMLPWAPLVPFLHDGVISSLRAYSPSALRALATHADPAVDIEL 229
Query 246 LPAPTRLFPPSLAVVFSR 263
L P +AV R
Sbjct 230 RGG---LLSPQVAVATRR 244
>gi|126437805|ref|YP_001073496.1| type 11 methyltransferase [Mycobacterium sp. JLS]
gi|126237605|gb|ABO01006.1| Methyltransferase type 11 [Mycobacterium sp. JLS]
Length=255
Score = 235 bits (599), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 129/235 (55%), Positives = 166/235 (71%), Gaps = 7/235 (2%)
Query 11 IATMPRGGPDASWLDRRFQTDALEYLDRDDVPDEVKQKIIGVLDRVGTLTNLHEKYARIA 70
I MPRGGP AS LDR +T+ EYLDRDD+ D VK+ ++ LDR G L H +YA IA
Sbjct 11 IDRMPRGGPRASCLDRLLETNRSEYLDRDDIDDRVKRSVVRALDRTGELFGNHSRYAEIA 70
Query 71 LKLVSDIPNPRILELGAGHGKLSAKILELHPTATVTISDLDPTSVANIAAGELGTHPRAR 130
L ++D+P+P+ILELGAGHG LS ++LE HPTA VT++DLD TSVA IAA +LG+HPRAR
Sbjct 71 LAEIADVPDPKILELGAGHGGLSRRLLEAHPTAEVTVTDLDETSVAKIAASDLGSHPRAR 130
Query 131 TQVIDATAIDGHDHSYDLAVFALAFHHLPPTVACKAIAEATRVGKRFLIIDLKRQKPLSF 190
QV+DATAID D +Y LAVF L+FHHLPP +A +AIAE TRV + LI+DL R P
Sbjct 131 VQVMDATAIDAPDRAYALAVFVLSFHHLPPALAARAIAEGTRVADKLLIVDLPR-PPAPL 189
Query 191 TLSSVLLLPLHLLLLPWSSMRSSMHDGFISALRAYSPSALQTLARAADPGMQVEI 245
+ +L + L+P++ HDG IS+LR YSP+AL+ LA A P ++VE+
Sbjct 190 HVVRLLAMLPLAPLVPFA------HDGVISSLRCYSPAALRALAAHAGPDIEVEL 238
>gi|108801837|ref|YP_642034.1| type 12 methyltransferase [Mycobacterium sp. MCS]
gi|119870990|ref|YP_940942.1| type 12 methyltransferase [Mycobacterium sp. KMS]
gi|108772256|gb|ABG10978.1| Methyltransferase type 12 [Mycobacterium sp. MCS]
gi|119697079|gb|ABL94152.1| Methyltransferase type 12 [Mycobacterium sp. KMS]
Length=255
Score = 234 bits (596), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 128/235 (55%), Positives = 165/235 (71%), Gaps = 7/235 (2%)
Query 11 IATMPRGGPDASWLDRRFQTDALEYLDRDDVPDEVKQKIIGVLDRVGTLTNLHEKYARIA 70
I MPRGGP AS LDR +T+ EYLDRDD+ D VK+ ++ LDR G L H +YA IA
Sbjct 11 IDRMPRGGPRASCLDRLLETNRSEYLDRDDIDDRVKRSVVRALDRTGELFGTHSRYAEIA 70
Query 71 LKLVSDIPNPRILELGAGHGKLSAKILELHPTATVTISDLDPTSVANIAAGELGTHPRAR 130
L ++D+P+P+ILELGAGHG LS ++LE HPTA VT++DLD SVA IAA +LG+HPRAR
Sbjct 71 LAEIADVPDPKILELGAGHGGLSRRLLEAHPTAEVTVTDLDEASVAKIAASDLGSHPRAR 130
Query 131 TQVIDATAIDGHDHSYDLAVFALAFHHLPPTVACKAIAEATRVGKRFLIIDLKRQKPLSF 190
QV+DATAID D +Y LAVF L+FHHLPP +A +AIAE TRV + LI+DL R P
Sbjct 131 VQVMDATAIDAPDRAYALAVFVLSFHHLPPALAARAIAEGTRVADKLLIVDLPR-PPAPL 189
Query 191 TLSSVLLLPLHLLLLPWSSMRSSMHDGFISALRAYSPSALQTLARAADPGMQVEI 245
+ +L + L+P++ HDG IS+LR YSP+AL+ LA A P ++VE+
Sbjct 190 HVVRLLAMLPLAPLVPFA------HDGVISSLRCYSPAALRALAAHAGPEIEVEL 238
>gi|118469319|ref|YP_890449.1| hypothetical protein MSMEG_6231 [Mycobacterium smegmatis str.
MC2 155]
gi|118170606|gb|ABK71502.1| conserved hypothetical protein [Mycobacterium smegmatis str.
MC2 155]
Length=251
Score = 230 bits (586), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 125/239 (53%), Positives = 160/239 (67%), Gaps = 17/239 (7%)
Query 11 IATMPRGGPDASWLDRRFQTDALEYLDRDDVPDEVKQKIIGVLDRVGTLTNLHEKYARIA 70
IA MPRGGP AS LDR QTD LEYLDRDDV VK+ ++ L+ G + HEK+A I+
Sbjct 11 IAAMPRGGPRASCLDRLLQTDRLEYLDRDDVDQRVKRSVVRALEWTGDMFGNHEKFAAIS 70
Query 71 LKLVSDIPNPRILELGAGHGKLSAKILELHPTATVTISDLDPTSVANIAAGELGTHPRAR 130
L L++++P+PRILELGAGHG +S ++L HPTA VT++D+DP +VA +A GELG HPRA
Sbjct 71 LDLLAEVPDPRILELGAGHGSVSRRLLANHPTAHVTVTDVDPAAVAAMADGELGDHPRAV 130
Query 131 TQVIDATAIDGHDHSYDLAVFALAFHHLPPTVACKAIAEATRVGKRFLIIDLKRQKPLSF 190
+ +DAT ID D S+DLA+FAL+FHHL P A AE TRV + LIIDL R
Sbjct 131 VRAMDATDIDADDGSFDLALFALSFHHLSPAQAAAVFAEGTRVARTLLIIDLPRPPA--- 187
Query 191 TLSSVLLLPLHLL----LLPWSSMRSSMHDGFISALRAYSPSALQTLARAADPGMQVEI 245
PLHLL +LP + + +HDG IS+LR YSPSAL+ L AA G+ +E+
Sbjct 188 --------PLHLLRLATMLPLAPLVPFVHDGVISSLRCYSPSALRAL--AAHAGVALEL 236
>gi|317507006|ref|ZP_07964773.1| methyltransferase domain-containing protein [Segniliparus rugosus
ATCC BAA-974]
gi|316254690|gb|EFV13993.1| methyltransferase domain-containing protein [Segniliparus rugosus
ATCC BAA-974]
Length=255
Score = 224 bits (571), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 123/230 (54%), Positives = 158/230 (69%), Gaps = 4/230 (1%)
Query 14 MPRGGPDASWLDRRFQTDALEYLDRDDVPDEVKQKIIGVLDRVGTLTNLHEKYARIALKL 73
+PRGGP ASWLDR QTD E+LDRDDVP VK +I LDR+G HEK+A +AL+
Sbjct 13 LPRGGPRASWLDRFLQTDRQEFLDRDDVPYRVKGSVIRSLDRMGEQMRWHEKFAELALEQ 72
Query 74 VSDIPNPRILELGAGHGKLSAKILELHPTATVTISDLDPTSVANIAAGELGTHPRARTQV 133
V+ P+P+ILELG+GHG LS KIL+LHP A V I+D++P SVA I G+LG+HPRA +V
Sbjct 73 VAGTPSPKILELGSGHGGLSRKILQLHPRAEVVITDVEPESVAKIRNGDLGSHPRATVKV 132
Query 134 IDATAIDGHDHSYDLAVFALAFHHLPPTVACKAIAEATRVGKRFLIIDLKRQKPLSFTLS 193
DATAID +YDLAVFA +FHHLPP +A + + E TR K+ LIID+ R P S L
Sbjct 133 EDATAIDAPAGTYDLAVFAQSFHHLPPKLASRVLGEGTRAAKKLLIIDVLR--PPSLMLL 190
Query 194 SVLLLPLHLLLLPWSSMRSSMHDGFISALRAYSPSALQTLARAADPGMQV 243
+ LP+ + + HDGFIS LRAY P+A + LA+AADP +++
Sbjct 191 AG--LPMFFSFAAVTQGLPTAHDGFISLLRAYRPAAFRALAKAADPDIKL 238
>gi|169631773|ref|YP_001705422.1| hypothetical protein MAB_4700c [Mycobacterium abscessus ATCC
19977]
gi|169243740|emb|CAM64768.1| Conserved hypothetical protein [Mycobacterium abscessus]
Length=255
Score = 219 bits (558), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 126/237 (54%), Positives = 169/237 (72%), Gaps = 10/237 (4%)
Query 11 IATMPRGGPDASWLDRRFQTDALEYLDRDDVPDEVKQKIIGVLDRVGT--LTNLHEKYAR 68
I++MPRGGP+ASWLDRR QTD LEYLDRDDV D++K++++ LDR G +HEK AR
Sbjct 11 ISSMPRGGPNASWLDRRLQTDRLEYLDRDDV-DDLKRRVMQSLDRAGRRRWIGIHEKCAR 69
Query 69 IALKLVSDIPNPRILELGAGHGKLSAKILELHPTATVTISDLDPTSVANIAAGELGTHPR 128
+A++ V+D+ P+ILELGAG G LS K+LE+H TA VT++D+DP+ VA +AAGE+G+HPR
Sbjct 70 MAIREVADVDRPKILELGAGLGGLSHKLLEMHSTAQVTVTDVDPSFVAAVAAGEIGSHPR 129
Query 129 ARTQVIDATAIDGHDHSYDLAVFALAFHHLPPTVACKAIAEATRVGKRFLIIDLKRQKPL 188
A + +DAT ID YDLAVFAL+ HHLPP +A + A TRV ++ LI+DL R P+
Sbjct 130 ATVRQLDATEIDSPGGYYDLAVFALSLHHLPPELAARVFATGTRVARKLLIVDLPR-PPV 188
Query 189 SFTLSSVLLLPLHLLLLPWSSMRSSMHDGFISALRAYSPSALQTLARAADPGMQVEI 245
L+ + ++ + + P HDGFIS+LRAYSPSAL+ LA ADP + VE
Sbjct 189 PLHLALLAVVLPLVAISPLQ------HDGFISSLRAYSPSALRALAHHADPAINVEF 239
>gi|145221918|ref|YP_001132596.1| type 11 methyltransferase [Mycobacterium gilvum PYR-GCK]
gi|315446346|ref|YP_004079225.1| methylase involved in ubiquinone/menaquinone biosynthesis [Mycobacterium
sp. Spyr1]
gi|145214404|gb|ABP43808.1| Methyltransferase type 11 [Mycobacterium gilvum PYR-GCK]
gi|315264649|gb|ADU01391.1| methylase involved in ubiquinone/menaquinone biosynthesis [Mycobacterium
sp. Spyr1]
Length=243
Score = 208 bits (529), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 123/257 (48%), Positives = 163/257 (64%), Gaps = 21/257 (8%)
Query 14 MPRGGPDASWLDRRFQTDALEYLDR-DDVPDEV--KQKIIGVLDRVGTLTNLHEKYARIA 70
MPRGGP AS LDR +TD EYLDR ++P +V K+ +I L+ G H ++A I
Sbjct 1 MPRGGPRASCLDRLLETDRQEYLDRASELPADVARKRSVIRALEWTGETFGHHVRFAEIV 60
Query 71 LKLVSDIPNPRILELGAGHGKLSAKILELHPTATVTISDLDPTSVANIAAGELGTHPRAR 130
L +SD+P+P+ILELGAGHG LS K+L+ HPTA +T++D++P SVA IA ++G HPRA
Sbjct 61 LDQISDVPDPKILELGAGHGALSRKLLDWHPTARLTVTDIEPASVAAIADSDVGAHPRAT 120
Query 131 TQVIDATAIDGHDHSYDLAVFALAFHHLPPTVACKAIAEATRVGKRFLIIDLKRQKPLSF 190
+ +DATA+D D +DLAVFAL+FHHLPP A + IAE TR LIIDL R
Sbjct 121 VRQMDATALDAADGEFDLAVFALSFHHLPPAAAARVIAEGTRAADTLLIIDLPRPP---- 176
Query 191 TLSSVLLLPLHLL----LLPWSSMRSSMHDGFISALRAYSPSALQTLARAADPGMQVEIL 246
PLHL+ +LPW+ + +HDG IS+LRAYSP+AL+ LA A + +E+
Sbjct 177 -------APLHLVRLATMLPWAPLVPFVHDGVISSLRAYSPAALRALAAHAGEDIDIELR 229
Query 247 PAPTRLFPPSLAVVFSR 263
LF P +AV R
Sbjct 230 GG---LFSPQVAVAARR 243
>gi|169631064|ref|YP_001704713.1| hypothetical protein MAB_3985c [Mycobacterium abscessus ATCC
19977]
gi|169243031|emb|CAM64059.1| Conserved hypothetical protein [Mycobacterium abscessus]
Length=252
Score = 197 bits (501), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 113/247 (46%), Positives = 154/247 (63%), Gaps = 13/247 (5%)
Query 11 IATMPRGGPDASWLDRRFQTDALEYLDRDDVPDEVKQKIIGVLDRVGTLTNLHEKYARIA 70
I +MPR G A DR+ QTD LEYLDRDDVP + K+ ++ LD +G LH A A
Sbjct 7 IDSMPRAGFGAPVWDRKLQTDRLEYLDRDDVPAK-KRSVVESLDLLGEKKGLHRWNAEQA 65
Query 71 LKLVSDIPNPRILELGAGHGKLSAKILELHPTATVTISDLDPTSVANIAAGELGTHPRAR 130
+ I +PR+LELGA HG LS ++L+L P A++T++D++P+SVA IAA +G+ PR
Sbjct 66 AGFLVGIDSPRVLELGAAHGGLSRELLKLRPDASITVTDIEPSSVAGIAASGMGSDPRVS 125
Query 131 TQVIDATAIDGHDHSYDLAVFALAFHHLPPTVACKAIAEATRVGKRFLIIDLKRQKPLSF 190
+V+DATAID D ++DL VFAL+FHHLPP++A K E TRVG+ LIIDL R
Sbjct 126 VRVMDATAIDAPDGAFDLVVFALSFHHLPPSLAAKVFVEGTRVGRTLLIIDLLRLPAPLL 185
Query 191 TLSSVLLLPLHLLLLPWSSMRSSMHDGFISALRAYSPSALQTLARAADPGMQVEI----- 245
+ + + W +R HDG IS LRAY P AL++LA ADP + +E+
Sbjct 186 APAYLFAAAVG-----W--VRPVAHDGAISQLRAYGPRALRSLAEHADPSIIIELRARLQ 238
Query 246 LPAPTRL 252
LP P ++
Sbjct 239 LPMPLQI 245
>gi|326903587|gb|EGE50520.1| hypothetical protein TBPG_01463 [Mycobacterium tuberculosis W-148]
Length=178
Score = 178 bits (452), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 89/91 (98%), Positives = 90/91 (99%), Gaps = 0/91 (0%)
Query 192 LSSVLLLPLHLLLLPWSSMRSSMHDGFISALRAYSPSALQTLARAADPGMQVEILPAPTR 251
SSVLLLPLHLLLLPWSSMRSSMHDGFISALRAY+PSALQTLARAADPGMQVEILPAPTR
Sbjct 88 FSSVLLLPLHLLLLPWSSMRSSMHDGFISALRAYTPSALQTLARAADPGMQVEILPAPTR 147
Query 252 LFPPSLAVVFSRSSSAPTESSECSADRQPGE 282
LFPPSLAVVFSRSSSAPTESSECSADRQPGE
Sbjct 148 LFPPSLAVVFSRSSSAPTESSECSADRQPGE 178
>gi|121637871|ref|YP_978094.1| putative methyltransferase [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|121493518|emb|CAL71992.1| Probable methyltransferase [Mycobacterium bovis BCG str. Pasteur
1173P2]
Length=174
Score = 113 bits (283), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 56/65 (87%), Positives = 57/65 (88%), Gaps = 6/65 (9%)
Query 1 MGEANIREQAIATMPRGGPDASWLDRRFQTDALEYLDRDDVPDEVKQKIIGVL------D 54
MGEANIREQAIATMPRGGPDASWLDRRFQTDALEYLDRDDVPDEVKQKIIGV+
Sbjct 1 MGEANIREQAIATMPRGGPDASWLDRRFQTDALEYLDRDDVPDEVKQKIIGVVAVELHPR 60
Query 55 RVGTL 59
RVG L
Sbjct 61 RVGVL 65
>gi|78188233|ref|YP_378571.1| hypothetical protein Cag_0252 [Chlorobium chlorochromatii CaD3]
gi|78170432|gb|ABB27528.1| hypothetical protein Cag_0252 [Chlorobium chlorochromatii CaD3]
Length=301
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/232 (29%), Positives = 108/232 (47%), Gaps = 34/232 (14%)
Query 24 LDRRFQTDALEYLDRDDVPDEVKQKIIGVLDRVGTLTNLHEKYARIALKLVSDIPNP--- 80
LDR ++T+ EY+D + V + K ++ LDR L +++ + A + L L ++PN
Sbjct 63 LDRAWRTNDREYMDEEHVSEAEKVTVMQALDRQNRLMDIYNRSANMLLALCREVPNQPQR 122
Query 81 --RILELGAGHGKLSAKILEL----HPTATVTISDLDPTSVANIAAGELGTHPRARTQVI 134
R+LEL G G L+ + E+ H + +T SD A +A E G + +A+ Q +
Sbjct 123 PIRVLELACGSGGLALALAEMAQRHHLSLEITASD------AVLAYCEEG-NAQAKAQQL 175
Query 135 DAT--------AIDGHDHSYDLAVFALAFHHLPPTVACKAIAEA-TRVGKRFLIIDLKRQ 185
T D + YD+ V + + HH IA+A ++ F+ D +R
Sbjct 176 PVTFRQLDAFHLTDYANEQYDITVMSQSLHHFTAGQLAVIIAQAMSQTTTAFVGTDAQR- 234
Query 186 KPLSFTLSSVLLLPLHLLLLPWSSMRSSMHDGFISALRAYSPSALQTLARAA 237
S L+ + L L +P ++ DGFISA + YS L +A +A
Sbjct 235 ---SVLLAGGVPLVASLQAIPAFAL-----DGFISARKFYSEPELALIAESA 278
>gi|189347464|ref|YP_001943993.1| type 12 methyltransferase [Chlorobium limicola DSM 245]
gi|189341611|gb|ACD91014.1| Methyltransferase type 12 [Chlorobium limicola DSM 245]
Length=311
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 67/235 (29%), Positives = 105/235 (45%), Gaps = 27/235 (11%)
Query 21 ASWLDRRFQTDALEYLDRDDVPDEVKQKIIGVLDRVGTLTNLHEKYARIALKLVSDIPN- 79
A LDR +T+ E +D +++ K I+ LDR ++ L+ +YA + L LV DI +
Sbjct 60 AEELDRLLRTEEPELMDSENLAATEKLAIVRALDRQNSVMGLYSRYAALLLPLVRDIASR 119
Query 80 ----PRILELGAGHGKLSAKILELHPTA-------TVTISDLDPTSVANIAAGELGTHPR 128
R+LEL G G L+ L L A +VT SD+ P + L
Sbjct 120 TQSRVRLLELAGGTGGLA---LALASEAQKQDLPLSVTGSDVVPEYIREAKRVALEKGLP 176
Query 129 ARTQVIDATAID-GHDHSYDLAVFALAFHHLPPTVACKAIAEA-TRVGKRFLIIDLKRQK 186
+++DA ++ G + ++D+ + + + HH P IA A R F+ ID R
Sbjct 177 VTFRLLDAFDMNTGQNETFDIILISQSLHHFTPGQLAVMIANAEKRNASAFVGIDGHRDL 236
Query 187 PLSFTLSSVLLLPLHLLLLPWSSMRSSMHDGFISALRAYSPSALQTLAR-AADPG 240
L + L L +P ++ DG SA + YS L+ +A A DPG
Sbjct 237 LLGIGMP----LAAGLQGIPAFTL-----DGLTSARKFYSEPELRLIAETAVDPG 282
>gi|343925190|ref|ZP_08764719.1| putative methyltransferase [Gordonia alkanivorans NBRC 16433]
gi|343764897|dbj|GAA11645.1| putative methyltransferase [Gordonia alkanivorans NBRC 16433]
Length=198
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/98 (39%), Positives = 53/98 (55%), Gaps = 4/98 (4%)
Query 78 PNPRILELGAGHGKLSAKILELHPT--ATVTISDLDPTSVANIAAGELGTHPRARTQVID 135
P R+LE+G G G ++ +IL +P VT++D DP VA + G RA QV D
Sbjct 35 PRGRVLEIGGGAGAMTEQILTTNPDELVDVTVTDFDPVMVAAASDRLQGFGARAHAQVAD 94
Query 136 ATAIDGHDHSYDLAVFALAFHHLPPTVACKAIAEATRV 173
ATA+ D S+D V + HH+ +A+AEA RV
Sbjct 95 ATALPFEDGSFDTVVSFIMLHHV--IDWERALAEAARV 130
>gi|84489411|ref|YP_447643.1| hypothetical protein Msp_0602 [Methanosphaera stadtmanae DSM
3091]
gi|84372730|gb|ABC57000.1| conserved hypothetical protein [Methanosphaera stadtmanae DSM
3091]
Length=225
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/107 (35%), Positives = 55/107 (52%), Gaps = 5/107 (4%)
Query 66 YARIALKLVSDIPN---PRILELGAGHGKLSAKILELHPTATVTISDLDPTSVANIAAGE 122
Y ++ L++ IP+ PRIL+LG G G ++ K+LE P VT DL + IA +
Sbjct 26 YNQMIEALINAIPDNESPRILDLGCGTGNITKKVLERFPNGKVTCFDLSEKMIE-IAKEK 84
Query 123 LGTHPRARTQVIDATAIDGHDHSYDLAVFALAFHHLPPTVACKAIAE 169
L + + D T ID D YD + +LA HH+P A K + +
Sbjct 85 LSDYDNIEYVIGDFTIIDIID-KYDAIISSLALHHIPNNQAKKDMYQ 130
>gi|339445049|ref|YP_004711053.1| hypothetical protein EGYY_15120 [Eggerthella sp. YY7918]
gi|338904801|dbj|BAK44652.1| hypothetical protein EGYY_15120 [Eggerthella sp. YY7918]
Length=212
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/137 (30%), Positives = 67/137 (49%), Gaps = 4/137 (2%)
Query 61 NLHEKYARIALKLVSDIPNPRILELGAGHGKLSAKILELHPTATVTISDLDPTSVANIAA 120
L+ A ++ + +PR+L+LG G G L+ +L+ P + DL ++A AA
Sbjct 35 GLYRIVAGEVVRACGGVDSPRVLDLGCGTGALAEIVLDEIPGCALVGVDL-SANMAERAA 93
Query 121 GELGTHPRARTQVIDATAIDGHDHSYDLAVFALAFHHLP-PTVACKAIAEATRVGKRFLI 179
LG RA V DA + HD S+D A +FHH P P +A + A R G F++
Sbjct 94 ERLGG--RAEVVVGDAEHLPFHDGSFDAAYCNDSFHHYPDPALAAFQVWRALRPGGTFVV 151
Query 180 IDLKRQKPLSFTLSSVL 196
D+ + P +++ +
Sbjct 152 GDVWQPAPARAVMNAWM 168
>gi|251796594|ref|YP_003011325.1| methyltransferase type 11 [Paenibacillus sp. JDR-2]
gi|247544220|gb|ACT01239.1| Methyltransferase type 11 [Paenibacillus sp. JDR-2]
Length=234
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 66/241 (28%), Positives = 101/241 (42%), Gaps = 25/241 (10%)
Query 29 QTDALEYLDRDDV-PDEVKQ---KIIGVLDRVGTLTNLHEKYARIALKLVSDIPNPRILE 84
+ D E+LD D V P E+++ ++ GV +G L R+ KL P R+L+
Sbjct 7 RLDLKEWLDGDSVEPVELEKSLREVWGVNRYLGGNPALFVHLERLMRKLAPSEP-VRVLD 65
Query 85 LGAGHGKLSAKILELHPTATVTIS----DLDPTSVANIAAGELGTHPRARTQVIDATAID 140
+ G L ++ ++S D P + +A HP DATA+
Sbjct 66 VATGLADLPVAFVDWCKKRGRSVSLVAVDNHP-QIVQLATRRTDAHPSIEVLHADATALP 124
Query 141 GHDHSYDLAVFALAFHHLPPTVACKAIAEATRVGKR-FLIIDLKRQKPLSFTLSSVLLLP 199
D S+DLA LA HHL A K AE RV + +++ DL+R + +
Sbjct 125 FADRSFDLAFCNLALHHLDEQSAIKLFAEMARVTRAGWVVTDLERHRLAYLAAKLL---- 180
Query 200 LHLLLLPWSSMRSSMHDGFISALRAYSPSALQTLARAADPGMQVEILPAPTRLFPPSLAV 259
W S + HDG +S +R+++P + L A V + FP LAV
Sbjct 181 ---AKFVWKSP-VTRHDGPLSVMRSFTPQETRRLVELAGVNAAVH------KHFPFRLAV 230
Query 260 V 260
V
Sbjct 231 V 231
>gi|115380548|ref|ZP_01467510.1| ubiquinone/menaquinone biosynthesis methyltransferase UbiE [Stigmatella
aurantiaca DW4/3-1]
gi|115362449|gb|EAU61722.1| ubiquinone/menaquinone biosynthesis methyltransferase UbiE [Stigmatella
aurantiaca DW4/3-1]
Length=260
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/161 (28%), Positives = 78/161 (49%), Gaps = 11/161 (6%)
Query 52 VLDRVGTLTNLHEKYARIALKLVSDIPNPRILELGAGHGKLSAKILELHPTATVTISDLD 111
+L+R+ +L + + + R +K + P R+L+L G G L+ K+L+ HP TV LD
Sbjct 47 LLNRMMSL-GIDQSWRRKTVKALELKPGYRVLDLATGTGDLALKVLKHHPEGTVV--GLD 103
Query 112 PT----SVANIAAGELGTHPRARTQVIDATAIDGHDHSYDLAVFALAFHHLPPT-VACKA 166
P+ + E G + ++ DA ++ D S+D A ++P A +
Sbjct 104 PSEGMMEIGRKKVAEEGLSAKCELKLGDAQSLPFEDQSFDGICMAFGIRNVPDRPRALRE 163
Query 167 IAEATRVGKRFLIIDLKRQKPLSFTLSSVLLLPLHLLLLPW 207
+A TR G R I++L +P + LS +L + ++PW
Sbjct 164 MARVTRPGGRIAILELS--EPRNGLLSPLLRFQIR-KVVPW 201
>gi|310821604|ref|YP_003953962.1| ubiquinone/menaquinone biosynthesis methyltransferase [Stigmatella
aurantiaca DW4/3-1]
gi|309394676|gb|ADO72135.1| Ubiquinone/menaquinone biosynthesis methyltransferase [Stigmatella
aurantiaca DW4/3-1]
Length=244
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/161 (28%), Positives = 78/161 (49%), Gaps = 11/161 (6%)
Query 52 VLDRVGTLTNLHEKYARIALKLVSDIPNPRILELGAGHGKLSAKILELHPTATVTISDLD 111
+L+R+ +L + + + R +K + P R+L+L G G L+ K+L+ HP TV LD
Sbjct 31 LLNRMMSL-GIDQSWRRKTVKALELKPGYRVLDLATGTGDLALKVLKHHPEGTVV--GLD 87
Query 112 PT----SVANIAAGELGTHPRARTQVIDATAIDGHDHSYDLAVFALAFHHLPPT-VACKA 166
P+ + E G + ++ DA ++ D S+D A ++P A +
Sbjct 88 PSEGMMEIGRKKVAEEGLSAKCELKLGDAQSLPFEDQSFDGICMAFGIRNVPDRPRALRE 147
Query 167 IAEATRVGKRFLIIDLKRQKPLSFTLSSVLLLPLHLLLLPW 207
+A TR G R I++L +P + LS +L + ++PW
Sbjct 148 MARVTRPGGRIAILELS--EPRNGLLSPLLRFQIR-KVVPW 185
>gi|295111256|emb|CBL28006.1| Methylase involved in ubiquinone/menaquinone biosynthesis [Synergistetes
bacterium SGP1]
Length=217
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/153 (30%), Positives = 67/153 (44%), Gaps = 13/153 (8%)
Query 55 RVGTLTNLHEKYARIALKLVSDIPNPRILELGAGHGKLSAKILELHP-TATVTISDL--D 111
R L E++ R A+ + R L+LG G G LS + E P +A++ +D+ D
Sbjct 26 RFAALFGFQERFYRQAVGDLRLGEGGRALDLGCGPGGLSYALAETSPASASIVGADISDD 85
Query 112 PTSVANIAAGELGTHPRARTQVIDATAI-DGHDHSYDLAVFALAFHHLPPTVACKAIAEA 170
A AG +D DGH +DL + ++A H PP V AIAE
Sbjct 86 QLECARRGAGAFACKVEFLKASMDELPFPDGH---FDLVMTSMALHETPPAVRRAAIAET 142
Query 171 TRV---GKRFLIIDLKRQKPLSFTLSSVLLLPL 200
R+ G FL++D R + F L ++ P
Sbjct 143 ARLLRPGGTFLLVDWSRPR---FGLWGIVWYPF 172
>gi|339444090|ref|YP_004710094.1| hypothetical protein EGYY_04800 [Eggerthella sp. YY7918]
gi|338903842|dbj|BAK43693.1| hypothetical protein EGYY_04800 [Eggerthella sp. YY7918]
Length=212
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/126 (31%), Positives = 63/126 (50%), Gaps = 4/126 (3%)
Query 72 KLVSDIPNPRILELGAGHGKLSAKILELHPTATVTISDLDPTSVANIAAGELGTHPRART 131
+ I +PR+L+LG G G L+ +L+ P + DL ++A AA LG RA
Sbjct 46 RACGGIDSPRVLDLGCGTGALAEIVLDEIPGCALVGVDL-SANMAERAAERLGG--RAEV 102
Query 132 QVIDATAIDGHDHSYDLAVFALAFHHLP-PTVACKAIAEATRVGKRFLIIDLKRQKPLSF 190
V DA + D+S+D A +FHH P P +A + A R G F++ D+ + P
Sbjct 103 VVGDAERLPFRDNSFDAAYCNDSFHHYPDPALAAFQVWRALRPGGTFVVGDVWQPAPARA 162
Query 191 TLSSVL 196
+++ +
Sbjct 163 VMNAWM 168
>gi|298490503|ref|YP_003720680.1| type 11 methyltransferase ['Nostoc azollae' 0708]
gi|298232421|gb|ADI63557.1| Methyltransferase type 11 ['Nostoc azollae' 0708]
Length=273
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/106 (34%), Positives = 55/106 (52%), Gaps = 4/106 (3%)
Query 82 ILELGAGHGKLSAKILELHPTATVTISDLDPTSVANIAAGELGTHPRARTQVIDATAIDG 141
+LELG+G G + K+L P V ++ P V A +L R Q+I+A+ +D
Sbjct 49 VLELGSGPGFFTQKLLTWLPNIAVIAVEIAPILVLR-AKHQLQDKIGKRLQIIEASVMDT 107
Query 142 H--DHSYDLAVFALAFHHLP-PTVACKAIAEATRVGKRFLIIDLKR 184
+ S+D AV L F HLP P+ A K I + G + +IID+ +
Sbjct 108 ELKESSFDFAVARLLFQHLPDPSGAAKEILRVLKPGGKLVIIDIDQ 153
>gi|198443327|pdb|3DTN|A Chain A, Crystal Structure Of Putative Methyltransferase-Mm_2633
From Methanosarcina Mazei .
gi|198443328|pdb|3DTN|B Chain B, Crystal Structure Of Putative Methyltransferase-Mm_2633
From Methanosarcina Mazei .
Length=234
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/84 (37%), Positives = 45/84 (54%), Gaps = 2/84 (2%)
Query 76 DIPNPRILELGAGHGKLSAKILELHPTATVTISDLDPTSVANIAAGELGTHPRARTQVID 135
D NP IL+LGAG G LSA ++E +P AT T+ D+ + IA + + + D
Sbjct 42 DTENPDILDLGAGTGLLSAFLMEKYPEATFTLVDM-SEKMLEIAKNRFRGNLKVKYIEAD 100
Query 136 ATAIDGHDHSYDLAVFALAFHHLP 159
+ D + YD+ V AL+ HHL
Sbjct 101 YSKYD-FEEKYDMVVSALSIHHLE 123
>gi|21228735|ref|NP_634657.1| hypothetical protein MM_2633 [Methanosarcina mazei Go1]
gi|20907246|gb|AAM32329.1| hypothetical protein MM_2633 [Methanosarcina mazei Go1]
Length=225
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/84 (37%), Positives = 45/84 (54%), Gaps = 2/84 (2%)
Query 76 DIPNPRILELGAGHGKLSAKILELHPTATVTISDLDPTSVANIAAGELGTHPRARTQVID 135
D NP IL+LGAG G LSA ++E +P AT T+ D+ + IA + + + D
Sbjct 40 DTENPDILDLGAGTGLLSAFLMEKYPEATFTLVDM-SEKMLEIAKNRFRGNLKVKYIEAD 98
Query 136 ATAIDGHDHSYDLAVFALAFHHLP 159
+ D + YD+ V AL+ HHL
Sbjct 99 YSKYD-FEEKYDMVVSALSIHHLE 121
>gi|110597185|ref|ZP_01385474.1| SAM (and some other nucleotide) binding motif [Chlorobium ferrooxidans
DSM 13031]
gi|110341376|gb|EAT59841.1| SAM (and some other nucleotide) binding motif [Chlorobium ferrooxidans
DSM 13031]
Length=299
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/227 (27%), Positives = 98/227 (44%), Gaps = 24/227 (10%)
Query 24 LDRRFQTDALEYLDRDDVPDEVKQKIIGVLDRVGTLTNLHEKYARIALKLVSDIP----- 78
+DR +T E++D D+P+ K K++ LDR + L+++Y + L ++ DI
Sbjct 63 IDRALRTTENEHMDDRDLPECEKLKLVNALDRQNAMMQLYQRYVDLLLPMLLDIARREQR 122
Query 79 NPRILELGAGHGKLSAKILELHPT----ATVTISDLDPTSV--ANIAAGELGTHPR-ART 131
N R++EL G G L+ + E TVT SD+ P + A A E T R
Sbjct 123 NARVVELACGSGGLTLALAEAVRQKKLPVTVTGSDIVPAYIDEARRRAEENSTPAEFRRL 182
Query 132 QVIDATAIDGHDHSYDLAVFALAFHHLPPTVACKAIAEATR-VGKRFLIIDLKRQKPLSF 190
++ T + + +D+ V A + HH P IA + F+ ID R
Sbjct 183 NALELTELKKDE--FDVMVMAQSLHHFTPGQLAVIIARSREHATTAFVGIDGYR------ 234
Query 191 TLSSVLLLPLHLLLLPWSSMRSSMHDGFISALRAYSPSALQTLARAA 237
S+LL L+ + + DG SA + Y+ L +A A
Sbjct 235 ---SLLLAGGVPLIAAMQGITAFTLDGLTSARKFYTELELDMIAEIA 278
>gi|194335887|ref|YP_002017681.1| type 12 methyltransferase [Pelodictyon phaeoclathratiforme BU-1]
gi|194308364|gb|ACF43064.1| Methyltransferase type 12 [Pelodictyon phaeoclathratiforme BU-1]
Length=310
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/227 (28%), Positives = 100/227 (45%), Gaps = 24/227 (10%)
Query 24 LDRRFQTDALEYLDRDDVPDEVKQKIIGVLDRVGTLTNLHEKYARIALKLVSDIPNP--- 80
LDR +T E++D + + K +++ LDR + L+ +Y + L ++ +
Sbjct 63 LDRVMRTSESEHMDDRKLSEREKLELVRALDRQNQMLRLYPRYVEMLLSIIEETDQGKQQ 122
Query 81 --RILELGAGHGKLSAKILE----LHPTATVTISDLDPTSV--ANIAAGELGTHPRARTQ 132
RILEL +G G LS + E + ++ SD+ P + N A E R
Sbjct 123 EIRILELASGSGGLSLALAEEARRKNLPLSIVASDIVPIFIEEGNRQAEEKKLPVTFR-- 180
Query 133 VIDATAI-DGHDHSYDLAVFALAFHHLPPTVACKAIAEATRVGKR-FLIIDLKRQKPLSF 190
+I+A + + S+DL V + + HH P IA++ + K F+ ID R
Sbjct 181 LINAFEMPEFSSGSFDLMVLSQSIHHFTPGQLAIMIAQSAKQTKTAFVGIDGYR------ 234
Query 191 TLSSVLLLPLHLLLLPWSSMRSSMHDGFISALRAYSPSALQTLARAA 237
S+LL L+ + S DGFISA + YS L +A A
Sbjct 235 ---SMLLAGGVPLMATMQGIASFTLDGFISARKFYSELELDIIAEIA 278
>gi|334339891|ref|YP_004544871.1| type 11 methyltransferase [Desulfotomaculum ruminis DSM 2154]
gi|334091245|gb|AEG59585.1| Methyltransferase type 11 [Desulfotomaculum ruminis DSM 2154]
Length=209
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/166 (30%), Positives = 77/166 (47%), Gaps = 24/166 (14%)
Query 54 DRVGTLTNLHEKYARIALKLVSDIPNPRILELGAGHGKLSAKILELHPTATVTISDLDPT 113
DR +L + + Y + A+ + P R+LELG G G LS + E ++V
Sbjct 19 DRWVSLMLMSQTYYQKAIGDLQLPPGSRVLELGCGTGSLSIALAERADRSSVFYG----- 73
Query 114 SVANIAAGELGTHPRARTQVIDAT------AIDG---HDHSYDLAVFALAFHHLPPTVAC 164
+IA +L ++ R +TQ + T ++D D +D + +LA H PP V
Sbjct 74 --VDIAEDQL-SYARVKTQEVPCTFQFINCSMDELIFEDQYFDAVITSLALHETPPAVRR 130
Query 165 KAIAEATRVGK---RFLIIDLKRQKPLSFTLSSVLLLPLHLLLLPW 207
AI E RV K +F+++D + + F L S L LP L + W
Sbjct 131 GAILETARVLKPEGQFILVDWSKPR---FGLMSALWLPF-LFMGAW 172
>gi|333920124|ref|YP_004493705.1| methyltransferase [Amycolicicoccus subflavus DQS3-9A1]
gi|333482345|gb|AEF40905.1| methyltransferase [Amycolicicoccus subflavus DQS3-9A1]
Length=218
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/145 (28%), Positives = 67/145 (47%), Gaps = 4/145 (2%)
Query 41 VPDEVKQKIIGVLDRVGTLTNLHEKYARIALKLVSDIPNPRILELGAGHGKLSAKILELH 100
+P + ++ + D TL NL +Y + L+ + P R+LE+G G G L +L+
Sbjct 14 LPGFGRDWLLPLYDPFSTLNNL-RRYHELLLRQAALSPGGRVLEIGCGTGNLLLLAKKLY 72
Query 101 PTATVTISDLDPTSVANIAAGELGTHPRARTQVIDATAIDGHDHSYDLAVFALAFHHLPP 160
P+ T D DP +++ H + + A + D S+D + A HHLP
Sbjct 73 PSTEFTGIDPDPKALSRAEKKAARRHLDVQFERGFAQRLPYDDDSFDQVLSAFMLHHLPT 132
Query 161 TVACKAIAEATRV---GKRFLIIDL 182
V A+AE RV G + ++D+
Sbjct 133 EVKQDALAEVQRVLRPGGQLHLVDV 157
>gi|120406460|ref|YP_956289.1| type 11 methyltransferase [Mycobacterium vanbaalenii PYR-1]
gi|119959278|gb|ABM16283.1| Methyltransferase type 11 [Mycobacterium vanbaalenii PYR-1]
Length=228
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/104 (35%), Positives = 52/104 (50%), Gaps = 4/104 (3%)
Query 82 ILELGAGHGKLSAKILELHPTATVTISDLDPTSVANIAAGELGTHPRARTQVIDATAIDG 141
+LE+G G G L+A+ L P+A +T +D DP +V G P R + A +
Sbjct 66 VLEIGCGTGNLTARALRAAPSARITATDPDPRAVTRARRKAAGEGP-VRFETAYAQELPF 124
Query 142 HDHSYDLAVFALAFHHLPPTVACKAIAEATRV---GKRFLIIDL 182
D S+D + +L HHL A+AEA RV G R I+D+
Sbjct 125 ADASFDRVLSSLMLHHLDDGTKVSALAEAWRVLRPGGRLHIVDV 168
>gi|320009021|gb|ADW03871.1| Methyltransferase type 12 [Streptomyces flavogriseus ATCC 33331]
Length=251
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/151 (33%), Positives = 69/151 (46%), Gaps = 7/151 (4%)
Query 54 DRVGTLTNLHEKYARIALKLVSDIPNPRILELGAGHGKLSAKILELHPTATVTISDLDPT 113
DR+ T L E +A + S P RI + G+G G L +++E P +T + DP
Sbjct 16 DRLTWNTPLSEAHAAQLVAACSPAPGARIADFGSGWGALLMRLVEAAPGSTGDGIETDPE 75
Query 114 SVANI--AAGELGTHPRARTQVIDATAIDGHDHSYDLAVFALAFHHLPPTV--ACKAIAE 169
+VA AGE G R R + A G D YDLAV + H P A +A+
Sbjct 76 AVARGLRLAGERGLTGRVRFHEVPAAEYPGDD--YDLAVSIGSSHAWPGGTPEALEALRA 133
Query 170 ATRVGKRFLIID-LKRQKPLSFTLSSVLLLP 199
A R G R L D ++P S L ++ +P
Sbjct 134 AVRPGGRVLFGDGFWEREPSSAALEALGAVP 164
>gi|182436537|ref|YP_001824256.1| putative SAM-dependent methyltransferase [Streptomyces griseus
subsp. griseus NBRC 13350]
gi|178465053|dbj|BAG19573.1| putative SAM-dependent methyltransferase [Streptomyces griseus
subsp. griseus NBRC 13350]
Length=251
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/130 (34%), Positives = 62/130 (48%), Gaps = 6/130 (4%)
Query 54 DRVGTLTNLHEKYARIALKLVSDIPNPRILELGAGHGKLSAKILELHPTATVTISDLDPT 113
DR+ T L E++A + + P RI++LG+G G+L ++++ P AT + DP
Sbjct 16 DRLTWNTPLSEEHAARLVAACAPAPGSRIVDLGSGWGELLMRLVDAAPGATGDGVETDPA 75
Query 114 SVANIA--AGELGTHPRARTQVIDATAIDGHDHSYDLAVFALAFHHLPPTV--ACKAIAE 169
+VA AGE G R R + A G YDLAV + H P T A A+A
Sbjct 76 AVARGRQLAGERGLGDRVRFHEVSAAEWTG--GGYDLAVSIGSSHAWPGTTREALTALAA 133
Query 170 ATRVGKRFLI 179
R G R L
Sbjct 134 TVRPGGRVLF 143
>gi|326777160|ref|ZP_08236425.1| Methyltransferase type 12 [Streptomyces cf. griseus XylebKG-1]
gi|326657493|gb|EGE42339.1| Methyltransferase type 12 [Streptomyces griseus XylebKG-1]
Length=251
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/130 (34%), Positives = 62/130 (48%), Gaps = 6/130 (4%)
Query 54 DRVGTLTNLHEKYARIALKLVSDIPNPRILELGAGHGKLSAKILELHPTATVTISDLDPT 113
DR+ T L E++A + + P RI++LG+G G+L ++++ P AT + DP
Sbjct 16 DRLTWNTPLSEEHAARLVAACAPAPGSRIVDLGSGWGELLTRLVDAAPGATGDGVETDPA 75
Query 114 SVANIA--AGELGTHPRARTQVIDATAIDGHDHSYDLAVFALAFHHLPPTV--ACKAIAE 169
+VA AGE G R R + A G YDLAV + H P T A A+A
Sbjct 76 AVARGRQLAGERGLGDRVRFHEVPAAEWTG--GGYDLAVSIGSSHAWPGTTREALTALAA 133
Query 170 ATRVGKRFLI 179
R G R L
Sbjct 134 TVRPGGRVLF 143
>gi|344342520|ref|ZP_08773391.1| hypothetical protein MarpuDRAFT_0204 [Marichromatium purpuratum
984]
gi|343805856|gb|EGV23751.1| hypothetical protein MarpuDRAFT_0204 [Marichromatium purpuratum
984]
Length=261
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/236 (26%), Positives = 96/236 (41%), Gaps = 41/236 (17%)
Query 33 LEYLDRDDVPDEVKQKIIGVLDRVGTLTNLHEKYARIALKLVSDIPNPRILELGAGHGKL 92
E D +P ++ I L+ + +L+ A + + + P IL+L AG G
Sbjct 8 FELEDLRQLPAAIRDGITDFLEFAVRVPDLYRPVAPRLERALKEAGAPTILDLCAGGGGP 67
Query 93 SAKIL-ELHPT----ATVTISDLDPTSVANIAAGELGTHPRARTQVIDATA--------I 139
A++L +L P V +SDL P A L +R +V++ +
Sbjct 68 WARMLDQLGPVRAGEVRVLVSDLYPN---RTALARLRERAGSRVEVVERSVSAMAVPVEF 124
Query 140 DGHDHSYDLAVFALAFHHLPPTVACKAIAEATRVGKRFLIIDLKRQKPLSFTLSSVLLLP 199
DG + AFHH P+ A +A+A G+ + + ++ PL L +L P
Sbjct 125 DGFRTLFS------AFHHFRPSEARAILADAVEQGRGIAVFESTQRHPL--LLLYMLFTP 176
Query 200 LHLLLLP-------WSSMRSS----------MHDGFISALRAYSPSALQTLARAAD 238
L +LL+ WS + + M DG +S LR YS + L L R D
Sbjct 177 LLVLLVTPFIRPFRWSRLFWTYLIPAIPLAVMFDGIVSCLRTYSVAELDVLTRGLD 232
>gi|189499476|ref|YP_001958946.1| type 12 methyltransferase [Chlorobium phaeobacteroides BS1]
gi|189494917|gb|ACE03465.1| Methyltransferase type 12 [Chlorobium phaeobacteroides BS1]
Length=299
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/227 (25%), Positives = 98/227 (44%), Gaps = 24/227 (10%)
Query 24 LDRRFQTDALEYLDRDDVPDEVKQKIIGVLDRVGTLTNLHEKYARI----ALKLVSDIPN 79
+DR +TD EY+D +P + ++I LD + + L+ +Y R+ ++L
Sbjct 63 IDRSLRTDEREYMDDPSLPPAKRLEMIRALDHMNNMMMLYPQYIRVIEPSIMELYEQEKR 122
Query 80 P-RILELGAGHGKLSAKILELHPTATVTISDLDPTSVANIAAGELGTHPRARTQV----- 133
P ++LEL +G G L+ + E T + + V E G Q+
Sbjct 123 PVQVLELASGAGGLAFALAEQAKTGKLPLEIRGSDIVTEYV--EFGNQTAKERQLPLDFQ 180
Query 134 -IDATAID-GHDHSYDLAVFALAFHHLPPTVACKAIAEATRVGKR-FLIIDLKRQKPLSF 190
I+A ++D + YD+ + + + HH P + I ++ G FL +D R L
Sbjct 181 RINAFSMDPAENGRYDIILLSQSLHHFTPGQLARIIVQSRNSGASLFLGLDGHRGLDL-- 238
Query 191 TLSSVLLLPLHLLLLPWSSMRSSMHDGFISALRAYSPSALQTLARAA 237
L+ V ++ L + + DG+ SA + YS + L +A A
Sbjct 239 -LAGVPIIALS------ERIAALALDGYTSARKFYSETELDLIAEIA 278
>gi|337768093|emb|CCB76806.1| Methyltransferase [Streptomyces cattleya NRRL 8057]
Length=255
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/127 (34%), Positives = 56/127 (45%), Gaps = 10/127 (7%)
Query 64 EKYARIALKLVSDI--PNPRILELGAGHGKLSAKILELHPTATVTISDLDPTSVANIAAG 121
E+ R+ L LV + P P +L+L G G +S ++LE P A T DLDP ++ IA G
Sbjct 31 EERFRVMLDLVEALAGPAPVVLDLACGTGSISRRVLERFPGARTTGVDLDP-ALLTIARG 89
Query 122 ELGTHPRARTQVIDATAIDGHD----HSYDLAVFALAFHHLPPTVACKAIAE---ATRVG 174
PRA D T D H YD + A A H L + E +VG
Sbjct 90 TFADEPRAEFVTADLTDPDWTGRLPHHEYDAVLTATALHWLDTGELARLYGELPGVLKVG 149
Query 175 KRFLIID 181
FL D
Sbjct 150 GVFLNAD 156
>gi|262195167|ref|YP_003266376.1| hypothetical protein Hoch_1937 [Haliangium ochraceum DSM 14365]
gi|262078514|gb|ACY14483.1| conserved hypothetical protein [Haliangium ochraceum DSM 14365]
Length=263
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/234 (26%), Positives = 104/234 (45%), Gaps = 30/234 (12%)
Query 33 LEYLDRDDVPDEVKQKIIGVLDRVGTLTNLHEK-YARIALKLVSDIPNPRILELGAGHGK 91
E+ D D P +++ + L V +L + + + +L+ + R+++L +G G
Sbjct 7 FEFEDFDWFPHTLRRYLTDYLRTVESLAATKLRGFVPLLTRLIDAKGSARVVDLCSGSGG 66
Query 92 ----LSAKILELHPTATVTISDL--DPTSVANIAAGELGTHPRARTQVIDATAIDGHDHS 145
L + E V ++D+ P+S+ + AG G H R + +DATA+ + S
Sbjct 67 PWPILQPALAEAGRPVEVVLTDIAPSPSSIDSAEAGHPGLH--YRHEPVDATAVPA-ELS 123
Query 146 YDLAVFALAFHHLPPTVACKAIAEATRVGKRFLIIDLKRQKP-----LSFTLSSVLLL-- 198
+F HH P A + +A+A + G+ + ++ ++P F +VLL+
Sbjct 124 GPRVIFN-GLHHFRPEAARRIVADAMQKGEGIAVFEVISRRPAHVLTFPFIFLAVLLITP 182
Query 199 ---PLHLLLLPWSSMRS-----SMHDGFISALRAYSPSALQTLARAADPGMQVE 244
P L W+ + M DG +SALR YS L+TL G+ VE
Sbjct 183 LIRPFSWGRLLWTYLIPLVPLLVMWDGVVSALRVYSQDELRTLVD----GLSVE 232
>gi|254409984|ref|ZP_05023764.1| Methyltransferase domain family [Microcoleus chthonoplastes PCC
7420]
gi|196183020|gb|EDX78004.1| Methyltransferase domain family [Microcoleus chthonoplastes PCC
7420]
Length=306
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/149 (29%), Positives = 69/149 (47%), Gaps = 8/149 (5%)
Query 54 DRVGTLTNLHEKYARIALKLVSDIPNPRILELGAGHGKLSAKILELHPTATVTISDLDPT 113
D++ L + Y + K V P I++LG G G + + +++P A +T DL P
Sbjct 113 DKLQGDAKLRQSYHELVQKQVKTEPQ-DIVDLGCGVGMSTFALQQIYPQANMTGVDLSPY 171
Query 114 --SVANIAAGELGTHPRARTQVIDATAIDGHDHSYDLAVFALAFHHLPPTVACKAIAEAT 171
+VA + + T + +AT + D SYDL L FH LP TVA + EA
Sbjct 172 FLAVAEYKSKQHHTEINWKHAAAEATGLP--DASYDLVSVFLVFHELPQTVAKAILREAR 229
Query 172 RV---GKRFLIIDLKRQKPLSFTLSSVLL 197
R+ G ++D+ Q + T+ + +
Sbjct 230 RLLRPGGYLTLMDMNPQSQVYATMPAYVF 258
>gi|254414464|ref|ZP_05028230.1| Methyltransferase domain family [Microcoleus chthonoplastes PCC
7420]
gi|196178694|gb|EDX73692.1| Methyltransferase domain family [Microcoleus chthonoplastes PCC
7420]
Length=264
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/126 (30%), Positives = 62/126 (50%), Gaps = 9/126 (7%)
Query 68 RIALKLVSDIPNP--RILELGAGHGKLSAKILELHPTATVTISDLDPTS--VANIAAGEL 123
RI +L++ I N RIL+LG G G + + + P A V DL P VA+ A +
Sbjct 75 RIREQLITTIENQPSRILDLGCGTGSTTLMLKQAFPEAVVIGLDLSPYMLIVADYKAEQA 134
Query 124 GTHPRARTQVIDATAIDGHDHSYDLAVFALAFHHLPPTVACKAIAEATRV---GKRFLII 180
G + + + +A D D S+DL ++ H PP ++ + E R+ G + +I+
Sbjct 135 GLDIQWQHGLAEAAGFD--DASFDLVTVSMVLHETPPQISQLIVQECCRLLEPGGQLIIL 192
Query 181 DLKRQK 186
D ++K
Sbjct 193 DGNQRK 198
>gi|253701829|ref|YP_003023018.1| methyltransferase type 11 [Geobacter sp. M21]
gi|251776679|gb|ACT19260.1| Methyltransferase type 11 [Geobacter sp. M21]
Length=235
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/138 (30%), Positives = 71/138 (52%), Gaps = 10/138 (7%)
Query 104 TVTISDLDPTSVANIAAGELGTHPRARTQVIDATAIDGHDHSYDLAVFALAFHHLPPTVA 163
++T D++ S+ +IA +P +V DA A+ D S+D V + HH+ A
Sbjct 88 SLTGVDINLRSI-DIARKVTAGYPEITLKVADALALPFPDRSFDYVVCSKMLHHMKDPEA 146
Query 164 CKAIAEATRVGKR-FLIIDLKRQKPLSFTLSSVLLLPLHLLLLPWSSMRSSMHDGFISAL 222
I E RV +R FL+IDL+R +++ L ++LL ++ R + +DG +S L
Sbjct 147 VSLIREMLRVARRGFLVIDLRRSW-IAYGL-------IYLLTRIFTRNRITRYDGPLSVL 198
Query 223 RAYSPSALQTLARAADPG 240
++++ + L LA A G
Sbjct 199 KSFTAAELADLATKAGAG 216
>gi|197117416|ref|YP_002137843.1| SAM-dependent methyltransferase [Geobacter bemidjiensis Bem]
gi|197086776|gb|ACH38047.1| SAM-dependent methyltransferase PRK06202, putative [Geobacter
bemidjiensis Bem]
Length=235
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/164 (27%), Positives = 79/164 (49%), Gaps = 14/164 (8%)
Query 82 ILELGAGHGKLSAKILELHPTATVTIS----DLDPTSVANIAAGELGTHPRARTQVIDAT 137
+L++ G L + + + IS D++ S+ +IA +P +V DA
Sbjct 62 LLDVATGSADLPVAVADWARKRGIGISMTGVDINLRSI-DIARKVTAGYPEITLKVADAL 120
Query 138 AIDGHDHSYDLAVFALAFHHLPPTVACKAIAEATRVGKR-FLIIDLKRQKPLSFTLSSVL 196
A+ D S+D V + HH+ A I E RV +R +L+IDL+R +++ L
Sbjct 121 ALPFPDRSFDYVVCSKTLHHMKDQEAVSLIREMLRVARRGYLVIDLRRSW-IAYGL---- 175
Query 197 LLPLHLLLLPWSSMRSSMHDGFISALRAYSPSALQTLARAADPG 240
++LL ++ R + +DG +S L++++ + L LA A G
Sbjct 176 ---IYLLTRIFTRNRITRYDGPLSVLKSFTAAELADLASKAGAG 216
>gi|183981439|ref|YP_001849730.1| hypothetical protein MMAR_1415 [Mycobacterium marinum M]
gi|183174765|gb|ACC39875.1| conserved hypothetical protein [Mycobacterium marinum M]
Length=197
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/97 (35%), Positives = 51/97 (53%), Gaps = 4/97 (4%)
Query 78 PNPRILELGAGHGKLSAKILELHPTATVTISDLDPTSVANIAAGELGTHPRARTQVIDAT 137
P +LE+GAG G ++A++L P +T++D D VA A RA + DAT
Sbjct 35 PVGEVLEIGAGSGAMAAEMLAAQPDTRITVTDYDDAMVAAAAQRLAPFQTRATARQADAT 94
Query 138 AIDGHDHSYDLAVFALAFHHLPPTVAC-KAIAEATRV 173
A+ D+++D + + HH TV + +AEA RV
Sbjct 95 ALPFGDNTFDTVLTFIMLHH---TVRWEQTLAEAVRV 128
>gi|334118513|ref|ZP_08492602.1| Methyltransferase type 11 [Microcoleus vaginatus FGP-2]
gi|333459520|gb|EGK88133.1| Methyltransferase type 11 [Microcoleus vaginatus FGP-2]
Length=272
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/104 (34%), Positives = 52/104 (50%), Gaps = 4/104 (3%)
Query 81 RILELGAGHGKLSAKILELHPTATVTISDLDPTSVANIAAGELGTHPRARTQVIDATAID 140
+LE G+G G + K+LEL P ++VT ++DP + A L R I A+ D
Sbjct 48 NVLEAGSGPGFFTEKLLELLPNSSVTAVEIDPV-LHEKAVAYLQDKGGDRVNRIQASVAD 106
Query 141 G--HDHSYDLAVFALAFHHLP-PTVACKAIAEATRVGKRFLIID 181
D++ D A+ L F HLP P A + I + G + +IID
Sbjct 107 TGLDDNTLDFAIARLLFVHLPEPVAAAREIFRILKPGGKLVIID 150
Lambda K H
0.319 0.134 0.389
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 449018424576
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40