BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
21,062,489 sequences; 7,218,481,314 total letters
Query= Rv1979c Rv1979c Possible conserved permease 2221719:2223164 reverse
MW:51084
Length=481
Score E
Sequences producing significant alignments: (Bits) Value
gi|289758091|ref|ZP_06517469.1| permease [Mycobacterium tubercul... 943 0.0
gi|15609116|ref|NP_216495.1| permease [Mycobacterium tuberculosi... 943 0.0
gi|15841455|ref|NP_336492.1| amino acid permease [Mycobacterium ... 943 0.0
gi|253798973|ref|YP_003031974.1| permease [Mycobacterium tubercu... 941 0.0
gi|31793158|ref|NP_855651.1| permease [Mycobacterium bovis AF212... 939 0.0
gi|340626992|ref|YP_004745444.1| putative permease [Mycobacteriu... 938 0.0
gi|289574651|ref|ZP_06454878.1| permease [Mycobacterium tubercul... 937 0.0
gi|308231996|ref|ZP_07414548.2| permease [Mycobacterium tubercul... 903 0.0
gi|15828069|ref|NP_302332.1| permease [Mycobacterium leprae TN] ... 704 0.0
gi|408779234|ref|ZP_11191007.1| permease [Mycobacterium kansasii... 621 1e-175
gi|383307791|ref|YP_005360602.1| permease [Mycobacterium tubercu... 367 3e-99
gi|336055122|ref|YP_004563409.1| amino acid permease [Lactobacil... 315 1e-83
gi|385818387|ref|YP_005854777.1| amino acid permease [Lactobacil... 311 3e-82
gi|319891363|ref|YP_004148238.1| amino acid permease [Staphyloco... 310 4e-82
gi|315039204|ref|YP_004032772.1| amino acid permease [Lactobacil... 310 4e-82
gi|406658791|ref|ZP_11066931.1| APC family amino acid transporte... 306 6e-81
gi|304438962|ref|ZP_07398885.1| arginine permease [Peptoniphilus... 303 8e-80
gi|395244088|ref|ZP_10421064.1| Amino acid transporter [Lactobac... 303 8e-80
gi|310658054|ref|YP_003935775.1| arginine permease [Clostridium ... 302 9e-80
gi|383845658|gb|EID83058.1| amino acid permease [Streptococcus i... 301 2e-79
gi|392428847|ref|YP_006469858.1| arginine permease [Streptococcu... 301 2e-79
gi|403515969|ref|YP_006656789.1| amino acid permease [Lactobacil... 299 1e-78
gi|169823908|ref|YP_001691519.1| putative amino acid transporter... 298 2e-78
gi|58338146|ref|YP_194731.1| amino acid permease [Lactobacillus ... 297 4e-78
gi|161508170|ref|YP_001578141.1| amino acid permease [Lactobacil... 296 8e-78
gi|227893927|ref|ZP_04011732.1| APC family amino acid-polyamine-... 295 1e-77
gi|148543318|ref|YP_001270688.1| amino acid permease-associated ... 295 2e-77
gi|309813124|ref|ZP_07706848.1| amino acid permease [Dermacoccus... 291 2e-76
gi|295693807|ref|YP_003602417.1| amino acid permease [Lactobacil... 291 3e-76
gi|295425933|ref|ZP_06818610.1| amino acid permease [Lactobacill... 290 5e-76
gi|229826233|ref|ZP_04452302.1| hypothetical protein GCWU000182_... 290 6e-76
gi|238853517|ref|ZP_04643893.1| amino acid transporter [Lactobac... 288 1e-75
gi|300362846|ref|ZP_07059016.1| APC family amino acid-polyamine-... 288 2e-75
gi|116630341|ref|YP_815611.1| amino acid transporter [Lactobacil... 288 2e-75
gi|282852303|ref|ZP_06261648.1| amino acid permease [Lactobacill... 288 2e-75
gi|343520981|ref|ZP_08757949.1| amino acid permease [Parvimonas ... 287 3e-75
gi|268320179|ref|YP_003293835.1| hypothetical protein FI9785_171... 286 6e-75
gi|42519815|ref|NP_965745.1| hypothetical protein LJ0510 [Lactob... 286 8e-75
gi|256843919|ref|ZP_05549406.1| amino acid permease [Lactobacill... 286 9e-75
gi|227878463|ref|ZP_03996403.1| APC family amino acid-polyamine-... 285 2e-74
gi|262046187|ref|ZP_06019150.1| amino acid permease [Lactobacill... 284 3e-74
gi|227889248|ref|ZP_04007053.1| APC family amino acid-polyamine-... 284 3e-74
gi|385826627|ref|YP_005862969.1| hypothetical protein [Lactobaci... 284 4e-74
gi|291458472|ref|ZP_06597862.1| amino acid permease [Oribacteriu... 284 4e-74
gi|375091548|ref|ZP_09737837.1| hypothetical protein HMPREF9709_... 281 2e-73
gi|366086773|ref|ZP_09453258.1| amino acid permease [Lactobacill... 281 2e-73
gi|373106898|ref|ZP_09521198.1| hypothetical protein HMPREF9623_... 281 3e-73
gi|377556597|ref|ZP_09786297.1| Amino acid transport protein [La... 278 1e-72
gi|238855438|ref|ZP_04645748.1| amino acid transporter [Lactobac... 278 2e-72
gi|256851625|ref|ZP_05557013.1| amino acid permease [Lactobacill... 278 2e-72
>gi|289758091|ref|ZP_06517469.1| permease [Mycobacterium tuberculosis T85]
gi|289713655|gb|EFD77667.1| permease [Mycobacterium tuberculosis T85]
Length=481
Score = 943 bits (2437), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 479/481 (99%), Positives = 481/481 (100%), Gaps = 0/481 (0%)
Query 1 VVGPRTRGYAIHKLGFCSVVMLGINSIIGAGIFLTPGEVIGLAGPFAPMAYVLAGIFAGV 60
+VGPRTRGYAIHKLGFCSVVMLGINSIIGAGIFLTPGEVIGLAGPFAPMAYVLAGIFAGV
Sbjct 1 MVGPRTRGYAIHKLGFCSVVMLGINSIIGAGIFLTPGEVIGLAGPFAPMAYVLAGIFAGV 60
Query 61 VAIVFATAARYVRTNGASYAYTTAAFGRRIGIYVGVTHAITASIAWGVLASFFVSTLLRV 120
VAIVFATAARYVRTNGASYAYTTAAFGRRIGIYVGVTHAITASIAWGVLASFFVSTLLRV
Sbjct 61 VAIVFATAARYVRTNGASYAYTTAAFGRRIGIYVGVTHAITASIAWGVLASFFVSTLLRV 120
Query 121 AFPDKAWADAEQLFSVKTLTFLGFIGVLLAINLFGNRAIKWANGTSTVGKAFALSAFIVG 180
AFPDKAWADAEQLFSVKTLTFLGFIGVLLAINLFGNRAIKWANGTSTVGKAFALSAFIVG
Sbjct 121 AFPDKAWADAEQLFSVKTLTFLGFIGVLLAINLFGNRAIKWANGTSTVGKAFALSAFIVG 180
Query 181 GLWIITTQHVNNYATAWSAYSATPYSLLGVAEIGKGTFSSMALATIVALYAFTGFESIAN 240
GLWIITTQHVNNYATAWSAYSATPYSLLGVAEIGKGTFSSMALATIVALYAFTGFESIAN
Sbjct 181 GLWIITTQHVNNYATAWSAYSATPYSLLGVAEIGKGTFSSMALATIVALYAFTGFESIAN 240
Query 241 AAEEMDAPDRNLPRAIPIAIFSVGAIYLLTLTVAMLLGSNKIAASDDTVKLAAAIGNATF 300
AAEEMDAPDRNLPRAIPIAIFSVGAIYLLTLTVAMLLGSNKIAASDDTVKLAAAIGNATF
Sbjct 241 AAEEMDAPDRNLPRAIPIAIFSVGAIYLLTLTVAMLLGSNKIAASDDTVKLAAAIGNATF 300
Query 301 RTIIVVGALISMFGINVAASFGAPRLWTALADSGVLPTRLSRKNQYDVPMVSFAITASLA 360
RTIIVVGALISMFGINVAASFGAPRLWTALADSGVLPTRLSRKNQYDVPMVSFAITASLA
Sbjct 301 RTIIVVGALISMFGINVAASFGAPRLWTALADSGVLPTRLSRKNQYDVPMVSFAITASLA 360
Query 361 LAFPLALRFDNLHLTGLAVIARFVQFIIVPIALIALARSQAVEHAAVRRNAFTDKVLPLV 420
LAFPLALRFDNLHLTGLAVIARFVQFIIVPIALIALARSQAVEHAAVRRNAFTDKVLPLV
Sbjct 361 LAFPLALRFDNLHLTGLAVIARFVQFIIVPIALIALARSQAVEHAAVRRNAFTDKVLPLV 420
Query 421 AIVVSVGLAVSYDYRCIFLVRGGPNYFSIALIVITFIVVPAMAYLHYYRIIRRVGDRPST 480
AIVVS+GLAVSYDYRCIFLVRGGPNYFSIALIVITFIVVPAMAYLHYYRIIRRVGDRPST
Sbjct 421 AIVVSIGLAVSYDYRCIFLVRGGPNYFSIALIVITFIVVPAMAYLHYYRIIRRVGDRPST 480
Query 481 R 481
R
Sbjct 481 R 481
>gi|15609116|ref|NP_216495.1| permease [Mycobacterium tuberculosis H37Rv]
gi|6226927|sp|Q10875.2|Y1979_MYCTU RecName: Full=Uncharacterized transporter Rv1979c/MT2031
gi|3256025|emb|CAA17852.1| POSSIBLE CONSERVED PERMEASE [Mycobacterium tuberculosis H37Rv]
Length=481
Score = 943 bits (2437), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 479/481 (99%), Positives = 481/481 (100%), Gaps = 0/481 (0%)
Query 1 VVGPRTRGYAIHKLGFCSVVMLGINSIIGAGIFLTPGEVIGLAGPFAPMAYVLAGIFAGV 60
+VGPRTRGYAIHKLGFCSVVMLGINSIIGAGIFLTPGEVIGLAGPFAPMAYVLAGIFAGV
Sbjct 1 MVGPRTRGYAIHKLGFCSVVMLGINSIIGAGIFLTPGEVIGLAGPFAPMAYVLAGIFAGV 60
Query 61 VAIVFATAARYVRTNGASYAYTTAAFGRRIGIYVGVTHAITASIAWGVLASFFVSTLLRV 120
VAIVFATAARYVRTNGASYAYTTAAFGRRIGIYVGVTHAITASIAWGVLASFFVSTLLRV
Sbjct 61 VAIVFATAARYVRTNGASYAYTTAAFGRRIGIYVGVTHAITASIAWGVLASFFVSTLLRV 120
Query 121 AFPDKAWADAEQLFSVKTLTFLGFIGVLLAINLFGNRAIKWANGTSTVGKAFALSAFIVG 180
AFPDKAWADAEQLFSVKTLTFLGFIGVLLAINLFGNRAIKWANGTSTVGKAFALSAFIVG
Sbjct 121 AFPDKAWADAEQLFSVKTLTFLGFIGVLLAINLFGNRAIKWANGTSTVGKAFALSAFIVG 180
Query 181 GLWIITTQHVNNYATAWSAYSATPYSLLGVAEIGKGTFSSMALATIVALYAFTGFESIAN 240
GLWIITTQHVNNYATAWSAYSATPYSLLGVAEIGKGTFSSMALATIVALYAFTGFESIAN
Sbjct 181 GLWIITTQHVNNYATAWSAYSATPYSLLGVAEIGKGTFSSMALATIVALYAFTGFESIAN 240
Query 241 AAEEMDAPDRNLPRAIPIAIFSVGAIYLLTLTVAMLLGSNKIAASDDTVKLAAAIGNATF 300
AAEEMDAPDRNLPRAIPIAIFSVGAIYLLTLTVAMLLGSNKIAASDDTVKLAAAIGNATF
Sbjct 241 AAEEMDAPDRNLPRAIPIAIFSVGAIYLLTLTVAMLLGSNKIAASDDTVKLAAAIGNATF 300
Query 301 RTIIVVGALISMFGINVAASFGAPRLWTALADSGVLPTRLSRKNQYDVPMVSFAITASLA 360
RTIIVVGALISMFGINVAASFGAPRLWTALADSGVLPTRLSRKNQYDVPMVSFAITASLA
Sbjct 301 RTIIVVGALISMFGINVAASFGAPRLWTALADSGVLPTRLSRKNQYDVPMVSFAITASLA 360
Query 361 LAFPLALRFDNLHLTGLAVIARFVQFIIVPIALIALARSQAVEHAAVRRNAFTDKVLPLV 420
LAFPLALRFDNLHLTGLAVIARFVQFIIVPIALIALARSQAVEHAAVRRNAFTDKVLPLV
Sbjct 361 LAFPLALRFDNLHLTGLAVIARFVQFIIVPIALIALARSQAVEHAAVRRNAFTDKVLPLV 420
Query 421 AIVVSVGLAVSYDYRCIFLVRGGPNYFSIALIVITFIVVPAMAYLHYYRIIRRVGDRPST 480
AIVVSVGLAVSYDYRCIFLVRGGPNYFSIALIVITF+VVPAMAYLHYYRIIRRVGDRPST
Sbjct 421 AIVVSVGLAVSYDYRCIFLVRGGPNYFSIALIVITFVVVPAMAYLHYYRIIRRVGDRPST 480
Query 481 R 481
R
Sbjct 481 R 481
>gi|15841455|ref|NP_336492.1| amino acid permease [Mycobacterium tuberculosis CDC1551]
gi|148661788|ref|YP_001283311.1| amino acid permease [Mycobacterium tuberculosis H37Ra]
gi|148823193|ref|YP_001287947.1| permease [Mycobacterium tuberculosis F11]
29 more sequence titles
Length=481
Score = 943 bits (2437), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 480/481 (99%), Positives = 481/481 (100%), Gaps = 0/481 (0%)
Query 1 VVGPRTRGYAIHKLGFCSVVMLGINSIIGAGIFLTPGEVIGLAGPFAPMAYVLAGIFAGV 60
+VGPRTRGYAIHKLGFCSVVMLGINSIIGAGIFLTPGEVIGLAGPFAPMAYVLAGIFAGV
Sbjct 1 MVGPRTRGYAIHKLGFCSVVMLGINSIIGAGIFLTPGEVIGLAGPFAPMAYVLAGIFAGV 60
Query 61 VAIVFATAARYVRTNGASYAYTTAAFGRRIGIYVGVTHAITASIAWGVLASFFVSTLLRV 120
VAIVFATAARYVRTNGASYAYTTAAFGRRIGIYVGVTHAITASIAWGVLASFFVSTLLRV
Sbjct 61 VAIVFATAARYVRTNGASYAYTTAAFGRRIGIYVGVTHAITASIAWGVLASFFVSTLLRV 120
Query 121 AFPDKAWADAEQLFSVKTLTFLGFIGVLLAINLFGNRAIKWANGTSTVGKAFALSAFIVG 180
AFPDKAWADAEQLFSVKTLTFLGFIGVLLAINLFGNRAIKWANGTSTVGKAFALSAFIVG
Sbjct 121 AFPDKAWADAEQLFSVKTLTFLGFIGVLLAINLFGNRAIKWANGTSTVGKAFALSAFIVG 180
Query 181 GLWIITTQHVNNYATAWSAYSATPYSLLGVAEIGKGTFSSMALATIVALYAFTGFESIAN 240
GLWIITTQHVNNYATAWSAYSATPYSLLGVAEIGKGTFSSMALATIVALYAFTGFESIAN
Sbjct 181 GLWIITTQHVNNYATAWSAYSATPYSLLGVAEIGKGTFSSMALATIVALYAFTGFESIAN 240
Query 241 AAEEMDAPDRNLPRAIPIAIFSVGAIYLLTLTVAMLLGSNKIAASDDTVKLAAAIGNATF 300
AAEEMDAPDRNLPRAIPIAIFSVGAIYLLTLTVAMLLGSNKIAASDDTVKLAAAIGNATF
Sbjct 241 AAEEMDAPDRNLPRAIPIAIFSVGAIYLLTLTVAMLLGSNKIAASDDTVKLAAAIGNATF 300
Query 301 RTIIVVGALISMFGINVAASFGAPRLWTALADSGVLPTRLSRKNQYDVPMVSFAITASLA 360
RTIIVVGALISMFGINVAASFGAPRLWTALADSGVLPTRLSRKNQYDVPMVSFAITASLA
Sbjct 301 RTIIVVGALISMFGINVAASFGAPRLWTALADSGVLPTRLSRKNQYDVPMVSFAITASLA 360
Query 361 LAFPLALRFDNLHLTGLAVIARFVQFIIVPIALIALARSQAVEHAAVRRNAFTDKVLPLV 420
LAFPLALRFDNLHLTGLAVIARFVQFIIVPIALIALARSQAVEHAAVRRNAFTDKVLPLV
Sbjct 361 LAFPLALRFDNLHLTGLAVIARFVQFIIVPIALIALARSQAVEHAAVRRNAFTDKVLPLV 420
Query 421 AIVVSVGLAVSYDYRCIFLVRGGPNYFSIALIVITFIVVPAMAYLHYYRIIRRVGDRPST 480
AIVVSVGLAVSYDYRCIFLVRGGPNYFSIALIVITFIVVPAMAYLHYYRIIRRVGDRPST
Sbjct 421 AIVVSVGLAVSYDYRCIFLVRGGPNYFSIALIVITFIVVPAMAYLHYYRIIRRVGDRPST 480
Query 481 R 481
R
Sbjct 481 R 481
>gi|253798973|ref|YP_003031974.1| permease [Mycobacterium tuberculosis KZN 1435]
gi|297634548|ref|ZP_06952328.1| permease [Mycobacterium tuberculosis KZN 4207]
gi|297731536|ref|ZP_06960654.1| permease [Mycobacterium tuberculosis KZN R506]
6 more sequence titles
Length=481
Score = 941 bits (2433), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 479/481 (99%), Positives = 481/481 (100%), Gaps = 0/481 (0%)
Query 1 VVGPRTRGYAIHKLGFCSVVMLGINSIIGAGIFLTPGEVIGLAGPFAPMAYVLAGIFAGV 60
+VGPRTRGYAIHKLGFCSVVMLGINSIIGAGIFLTPG+VIGLAGPFAPMAYVLAGIFAGV
Sbjct 1 MVGPRTRGYAIHKLGFCSVVMLGINSIIGAGIFLTPGDVIGLAGPFAPMAYVLAGIFAGV 60
Query 61 VAIVFATAARYVRTNGASYAYTTAAFGRRIGIYVGVTHAITASIAWGVLASFFVSTLLRV 120
VAIVFATAARYVRTNGASYAYTTAAFGRRIGIYVGVTHAITASIAWGVLASFFVSTLLRV
Sbjct 61 VAIVFATAARYVRTNGASYAYTTAAFGRRIGIYVGVTHAITASIAWGVLASFFVSTLLRV 120
Query 121 AFPDKAWADAEQLFSVKTLTFLGFIGVLLAINLFGNRAIKWANGTSTVGKAFALSAFIVG 180
AFPDKAWADAEQLFSVKTLTFLGFIGVLLAINLFGNRAIKWANGTSTVGKAFALSAFIVG
Sbjct 121 AFPDKAWADAEQLFSVKTLTFLGFIGVLLAINLFGNRAIKWANGTSTVGKAFALSAFIVG 180
Query 181 GLWIITTQHVNNYATAWSAYSATPYSLLGVAEIGKGTFSSMALATIVALYAFTGFESIAN 240
GLWIITTQHVNNYATAWSAYSATPYSLLGVAEIGKGTFSSMALATIVALYAFTGFESIAN
Sbjct 181 GLWIITTQHVNNYATAWSAYSATPYSLLGVAEIGKGTFSSMALATIVALYAFTGFESIAN 240
Query 241 AAEEMDAPDRNLPRAIPIAIFSVGAIYLLTLTVAMLLGSNKIAASDDTVKLAAAIGNATF 300
AAEEMDAPDRNLPRAIPIAIFSVGAIYLLTLTVAMLLGSNKIAASDDTVKLAAAIGNATF
Sbjct 241 AAEEMDAPDRNLPRAIPIAIFSVGAIYLLTLTVAMLLGSNKIAASDDTVKLAAAIGNATF 300
Query 301 RTIIVVGALISMFGINVAASFGAPRLWTALADSGVLPTRLSRKNQYDVPMVSFAITASLA 360
RTIIVVGALISMFGINVAASFGAPRLWTALADSGVLPTRLSRKNQYDVPMVSFAITASLA
Sbjct 301 RTIIVVGALISMFGINVAASFGAPRLWTALADSGVLPTRLSRKNQYDVPMVSFAITASLA 360
Query 361 LAFPLALRFDNLHLTGLAVIARFVQFIIVPIALIALARSQAVEHAAVRRNAFTDKVLPLV 420
LAFPLALRFDNLHLTGLAVIARFVQFIIVPIALIALARSQAVEHAAVRRNAFTDKVLPLV
Sbjct 361 LAFPLALRFDNLHLTGLAVIARFVQFIIVPIALIALARSQAVEHAAVRRNAFTDKVLPLV 420
Query 421 AIVVSVGLAVSYDYRCIFLVRGGPNYFSIALIVITFIVVPAMAYLHYYRIIRRVGDRPST 480
AIVVSVGLAVSYDYRCIFLVRGGPNYFSIALIVITFIVVPAMAYLHYYRIIRRVGDRPST
Sbjct 421 AIVVSVGLAVSYDYRCIFLVRGGPNYFSIALIVITFIVVPAMAYLHYYRIIRRVGDRPST 480
Query 481 R 481
R
Sbjct 481 R 481
>gi|31793158|ref|NP_855651.1| permease [Mycobacterium bovis AF2122/97]
gi|224990356|ref|YP_002645043.1| permease [Mycobacterium bovis BCG str. Tokyo 172]
gi|289443468|ref|ZP_06433212.1| permease [Mycobacterium tuberculosis T46]
15 more sequence titles
Length=481
Score = 939 bits (2428), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 479/481 (99%), Positives = 480/481 (99%), Gaps = 0/481 (0%)
Query 1 VVGPRTRGYAIHKLGFCSVVMLGINSIIGAGIFLTPGEVIGLAGPFAPMAYVLAGIFAGV 60
+VGPRTRGYAIHKLGFCSVVMLGINSIIGAGIFLTPGEVIGLAGPFAPMAYVLAGIFAGV
Sbjct 1 MVGPRTRGYAIHKLGFCSVVMLGINSIIGAGIFLTPGEVIGLAGPFAPMAYVLAGIFAGV 60
Query 61 VAIVFATAARYVRTNGASYAYTTAAFGRRIGIYVGVTHAITASIAWGVLASFFVSTLLRV 120
VAIVFATAARYVRTNGASYAYTTAAFGRRIGIYVGVTHAITASIAWGVLASFFVSTLLRV
Sbjct 61 VAIVFATAARYVRTNGASYAYTTAAFGRRIGIYVGVTHAITASIAWGVLASFFVSTLLRV 120
Query 121 AFPDKAWADAEQLFSVKTLTFLGFIGVLLAINLFGNRAIKWANGTSTVGKAFALSAFIVG 180
AFPDKAWADAEQLFSVKTLTFLGFIGVLLAINLFGNRAIKWANGTSTVGKAFALSAFIVG
Sbjct 121 AFPDKAWADAEQLFSVKTLTFLGFIGVLLAINLFGNRAIKWANGTSTVGKAFALSAFIVG 180
Query 181 GLWIITTQHVNNYATAWSAYSATPYSLLGVAEIGKGTFSSMALATIVALYAFTGFESIAN 240
GLWIITTQHVNNYATAWSAYSATPYSLLGVAEIGKGTFSSMALATIVALYAFTGFESIAN
Sbjct 181 GLWIITTQHVNNYATAWSAYSATPYSLLGVAEIGKGTFSSMALATIVALYAFTGFESIAN 240
Query 241 AAEEMDAPDRNLPRAIPIAIFSVGAIYLLTLTVAMLLGSNKIAASDDTVKLAAAIGNATF 300
AAEEMDAPDRNLPRAIPIAIFSVGAIYLLTLTVAMLLGSNKIAAS DTVKLAAAIGNATF
Sbjct 241 AAEEMDAPDRNLPRAIPIAIFSVGAIYLLTLTVAMLLGSNKIAASGDTVKLAAAIGNATF 300
Query 301 RTIIVVGALISMFGINVAASFGAPRLWTALADSGVLPTRLSRKNQYDVPMVSFAITASLA 360
RTIIVVGALISMFGINVAASFGAPRLWTALADSGVLPTRLSRKNQYDVPMVSFAITASLA
Sbjct 301 RTIIVVGALISMFGINVAASFGAPRLWTALADSGVLPTRLSRKNQYDVPMVSFAITASLA 360
Query 361 LAFPLALRFDNLHLTGLAVIARFVQFIIVPIALIALARSQAVEHAAVRRNAFTDKVLPLV 420
LAFPLALRFDNLHLTGLAVIARFVQFIIVPIALIALARSQAVEHAAVRRNAFTDKVLPLV
Sbjct 361 LAFPLALRFDNLHLTGLAVIARFVQFIIVPIALIALARSQAVEHAAVRRNAFTDKVLPLV 420
Query 421 AIVVSVGLAVSYDYRCIFLVRGGPNYFSIALIVITFIVVPAMAYLHYYRIIRRVGDRPST 480
AIVVSVGLAVSYDYRCIFLVRGGPNYFSIALIVITFIVVPAMAYLHYYRIIRRVGDRPST
Sbjct 421 AIVVSVGLAVSYDYRCIFLVRGGPNYFSIALIVITFIVVPAMAYLHYYRIIRRVGDRPST 480
Query 481 R 481
R
Sbjct 481 R 481
>gi|340626992|ref|YP_004745444.1| putative permease [Mycobacterium canettii CIPT 140010059]
gi|340005182|emb|CCC44331.1| putative conserved permease [Mycobacterium canettii CIPT 140010059]
Length=481
Score = 938 bits (2424), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 478/481 (99%), Positives = 479/481 (99%), Gaps = 0/481 (0%)
Query 1 VVGPRTRGYAIHKLGFCSVVMLGINSIIGAGIFLTPGEVIGLAGPFAPMAYVLAGIFAGV 60
+VGPRTRGYAIHKLGFCSVVMLGINSIIGAGIFLTPGEVIGLAGPFAPMAYVLAGIFAGV
Sbjct 1 MVGPRTRGYAIHKLGFCSVVMLGINSIIGAGIFLTPGEVIGLAGPFAPMAYVLAGIFAGV 60
Query 61 VAIVFATAARYVRTNGASYAYTTAAFGRRIGIYVGVTHAITASIAWGVLASFFVSTLLRV 120
VAIVFATAARYVRTNGASYAYTTAAFGRRIGIYVGVTHAITASIAWGVLASFFVSTLLRV
Sbjct 61 VAIVFATAARYVRTNGASYAYTTAAFGRRIGIYVGVTHAITASIAWGVLASFFVSTLLRV 120
Query 121 AFPDKAWADAEQLFSVKTLTFLGFIGVLLAINLFGNRAIKWANGTSTVGKAFALSAFIVG 180
AFPDKAWADAEQLFSVKTLTFLGFIGVLLAINLFGNRAIKWANGTSTVGKAFALSAFIVG
Sbjct 121 AFPDKAWADAEQLFSVKTLTFLGFIGVLLAINLFGNRAIKWANGTSTVGKAFALSAFIVG 180
Query 181 GLWIITTQHVNNYATAWSAYSATPYSLLGVAEIGKGTFSSMALATIVALYAFTGFESIAN 240
GLWIITTQHVNNYATAWSAYSATPYSLLGVAEIGKGTFSSMALATIVALYAFTGFESIAN
Sbjct 181 GLWIITTQHVNNYATAWSAYSATPYSLLGVAEIGKGTFSSMALATIVALYAFTGFESIAN 240
Query 241 AAEEMDAPDRNLPRAIPIAIFSVGAIYLLTLTVAMLLGSNKIAASDDTVKLAAAIGNATF 300
AAEEMDAPDRNLPRAIPIAIFSVGAIYLL LTVAMLLGSNKIAAS DTVKLAAAIGNATF
Sbjct 241 AAEEMDAPDRNLPRAIPIAIFSVGAIYLLALTVAMLLGSNKIAASGDTVKLAAAIGNATF 300
Query 301 RTIIVVGALISMFGINVAASFGAPRLWTALADSGVLPTRLSRKNQYDVPMVSFAITASLA 360
RTIIVVGALISMFGINVAASFGAPRLWTALADSGVLPTRLSRKNQYDVPMVSFAITASLA
Sbjct 301 RTIIVVGALISMFGINVAASFGAPRLWTALADSGVLPTRLSRKNQYDVPMVSFAITASLA 360
Query 361 LAFPLALRFDNLHLTGLAVIARFVQFIIVPIALIALARSQAVEHAAVRRNAFTDKVLPLV 420
LAFPLALRFDNLHLTGLAVIARFVQFIIVPIALIALARSQAVEHAAVRRNAFTDKVLPLV
Sbjct 361 LAFPLALRFDNLHLTGLAVIARFVQFIIVPIALIALARSQAVEHAAVRRNAFTDKVLPLV 420
Query 421 AIVVSVGLAVSYDYRCIFLVRGGPNYFSIALIVITFIVVPAMAYLHYYRIIRRVGDRPST 480
AIVVSVGLAVSYDYRCIFLVRGGPNYFSIALIVITFIVVPAMAYLHYYRIIRRVGDRPST
Sbjct 421 AIVVSVGLAVSYDYRCIFLVRGGPNYFSIALIVITFIVVPAMAYLHYYRIIRRVGDRPST 480
Query 481 R 481
R
Sbjct 481 R 481
>gi|289574651|ref|ZP_06454878.1| permease [Mycobacterium tuberculosis K85]
gi|289539082|gb|EFD43660.1| permease [Mycobacterium tuberculosis K85]
Length=481
Score = 937 bits (2423), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 478/481 (99%), Positives = 479/481 (99%), Gaps = 0/481 (0%)
Query 1 VVGPRTRGYAIHKLGFCSVVMLGINSIIGAGIFLTPGEVIGLAGPFAPMAYVLAGIFAGV 60
+VGPRTRGYAIHKLGFCSVVMLGINSIIGAGIFLTPGEVIGLAGPFAPMAYVLAGIFAGV
Sbjct 1 MVGPRTRGYAIHKLGFCSVVMLGINSIIGAGIFLTPGEVIGLAGPFAPMAYVLAGIFAGV 60
Query 61 VAIVFATAARYVRTNGASYAYTTAAFGRRIGIYVGVTHAITASIAWGVLASFFVSTLLRV 120
VAIVFATAARYVRTNGASYAYTTAAFGRRIGIYVGVTHAITASI WGVLASFFVSTLLRV
Sbjct 61 VAIVFATAARYVRTNGASYAYTTAAFGRRIGIYVGVTHAITASITWGVLASFFVSTLLRV 120
Query 121 AFPDKAWADAEQLFSVKTLTFLGFIGVLLAINLFGNRAIKWANGTSTVGKAFALSAFIVG 180
AFPDKAWADAEQLFSVKTLTFLGFIGVLLAINLFGNRAIKWANGTSTVGKAFALSAFIVG
Sbjct 121 AFPDKAWADAEQLFSVKTLTFLGFIGVLLAINLFGNRAIKWANGTSTVGKAFALSAFIVG 180
Query 181 GLWIITTQHVNNYATAWSAYSATPYSLLGVAEIGKGTFSSMALATIVALYAFTGFESIAN 240
GLWIITTQHVNNYATAWSAYSATPYSLLGVAEIGKGTFSSMALATIVALYAFTGFESIAN
Sbjct 181 GLWIITTQHVNNYATAWSAYSATPYSLLGVAEIGKGTFSSMALATIVALYAFTGFESIAN 240
Query 241 AAEEMDAPDRNLPRAIPIAIFSVGAIYLLTLTVAMLLGSNKIAASDDTVKLAAAIGNATF 300
AAEEMDAPDRNLPRAIPIAIFSVGAIYLLTLTVAMLLGSNKIAAS DTVKLAAAIGNATF
Sbjct 241 AAEEMDAPDRNLPRAIPIAIFSVGAIYLLTLTVAMLLGSNKIAASGDTVKLAAAIGNATF 300
Query 301 RTIIVVGALISMFGINVAASFGAPRLWTALADSGVLPTRLSRKNQYDVPMVSFAITASLA 360
RTIIVVGALISMFGINVAASFGAPRLWTALADSGVLPTRLSRKNQYDVPMVSFAITASLA
Sbjct 301 RTIIVVGALISMFGINVAASFGAPRLWTALADSGVLPTRLSRKNQYDVPMVSFAITASLA 360
Query 361 LAFPLALRFDNLHLTGLAVIARFVQFIIVPIALIALARSQAVEHAAVRRNAFTDKVLPLV 420
LAFPLALRFDNLHLTGLAVIARFVQFIIVPIALIALARSQAVEHAAVRRNAFTDKVLPLV
Sbjct 361 LAFPLALRFDNLHLTGLAVIARFVQFIIVPIALIALARSQAVEHAAVRRNAFTDKVLPLV 420
Query 421 AIVVSVGLAVSYDYRCIFLVRGGPNYFSIALIVITFIVVPAMAYLHYYRIIRRVGDRPST 480
AIVVSVGLAVSYDYRCIFLVRGGPNYFSIALIVITFIVVPAMAYLHYYRIIRRVGDRPST
Sbjct 421 AIVVSVGLAVSYDYRCIFLVRGGPNYFSIALIVITFIVVPAMAYLHYYRIIRRVGDRPST 480
Query 481 R 481
R
Sbjct 481 R 481
>gi|308231996|ref|ZP_07414548.2| permease [Mycobacterium tuberculosis SUMu001]
gi|308369579|ref|ZP_07418329.2| permease [Mycobacterium tuberculosis SUMu002]
gi|308370880|ref|ZP_07423064.2| permease [Mycobacterium tuberculosis SUMu003]
22 more sequence titles
Length=461
Score = 903 bits (2333), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 461/461 (100%), Positives = 461/461 (100%), Gaps = 0/461 (0%)
Query 21 MLGINSIIGAGIFLTPGEVIGLAGPFAPMAYVLAGIFAGVVAIVFATAARYVRTNGASYA 80
MLGINSIIGAGIFLTPGEVIGLAGPFAPMAYVLAGIFAGVVAIVFATAARYVRTNGASYA
Sbjct 1 MLGINSIIGAGIFLTPGEVIGLAGPFAPMAYVLAGIFAGVVAIVFATAARYVRTNGASYA 60
Query 81 YTTAAFGRRIGIYVGVTHAITASIAWGVLASFFVSTLLRVAFPDKAWADAEQLFSVKTLT 140
YTTAAFGRRIGIYVGVTHAITASIAWGVLASFFVSTLLRVAFPDKAWADAEQLFSVKTLT
Sbjct 61 YTTAAFGRRIGIYVGVTHAITASIAWGVLASFFVSTLLRVAFPDKAWADAEQLFSVKTLT 120
Query 141 FLGFIGVLLAINLFGNRAIKWANGTSTVGKAFALSAFIVGGLWIITTQHVNNYATAWSAY 200
FLGFIGVLLAINLFGNRAIKWANGTSTVGKAFALSAFIVGGLWIITTQHVNNYATAWSAY
Sbjct 121 FLGFIGVLLAINLFGNRAIKWANGTSTVGKAFALSAFIVGGLWIITTQHVNNYATAWSAY 180
Query 201 SATPYSLLGVAEIGKGTFSSMALATIVALYAFTGFESIANAAEEMDAPDRNLPRAIPIAI 260
SATPYSLLGVAEIGKGTFSSMALATIVALYAFTGFESIANAAEEMDAPDRNLPRAIPIAI
Sbjct 181 SATPYSLLGVAEIGKGTFSSMALATIVALYAFTGFESIANAAEEMDAPDRNLPRAIPIAI 240
Query 261 FSVGAIYLLTLTVAMLLGSNKIAASDDTVKLAAAIGNATFRTIIVVGALISMFGINVAAS 320
FSVGAIYLLTLTVAMLLGSNKIAASDDTVKLAAAIGNATFRTIIVVGALISMFGINVAAS
Sbjct 241 FSVGAIYLLTLTVAMLLGSNKIAASDDTVKLAAAIGNATFRTIIVVGALISMFGINVAAS 300
Query 321 FGAPRLWTALADSGVLPTRLSRKNQYDVPMVSFAITASLALAFPLALRFDNLHLTGLAVI 380
FGAPRLWTALADSGVLPTRLSRKNQYDVPMVSFAITASLALAFPLALRFDNLHLTGLAVI
Sbjct 301 FGAPRLWTALADSGVLPTRLSRKNQYDVPMVSFAITASLALAFPLALRFDNLHLTGLAVI 360
Query 381 ARFVQFIIVPIALIALARSQAVEHAAVRRNAFTDKVLPLVAIVVSVGLAVSYDYRCIFLV 440
ARFVQFIIVPIALIALARSQAVEHAAVRRNAFTDKVLPLVAIVVSVGLAVSYDYRCIFLV
Sbjct 361 ARFVQFIIVPIALIALARSQAVEHAAVRRNAFTDKVLPLVAIVVSVGLAVSYDYRCIFLV 420
Query 441 RGGPNYFSIALIVITFIVVPAMAYLHYYRIIRRVGDRPSTR 481
RGGPNYFSIALIVITFIVVPAMAYLHYYRIIRRVGDRPSTR
Sbjct 421 RGGPNYFSIALIVITFIVVPAMAYLHYYRIIRRVGDRPSTR 461
>gi|15828069|ref|NP_302332.1| permease [Mycobacterium leprae TN]
gi|221230546|ref|YP_002503962.1| permease [Mycobacterium leprae Br4923]
gi|13093623|emb|CAC30929.1| unknown permease [Mycobacterium leprae]
gi|219933653|emb|CAR72071.1| unknown permease [Mycobacterium leprae Br4923]
Length=572
Score = 704 bits (1818), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/462 (78%), Positives = 399/462 (87%), Gaps = 0/462 (0%)
Query 8 GYAIHKLGFCSVVMLGINSIIGAGIFLTPGEVIGLAGPFAPMAYVLAGIFAGVVAIVFAT 67
G AI KLGF SVVMLGINSIIGAGIF+TPGEVI +AGPFAP+AY LAGIFA V+AIVFAT
Sbjct 106 GRAISKLGFWSVVMLGINSIIGAGIFMTPGEVIKIAGPFAPIAYTLAGIFAAVLAIVFAT 165
Query 68 AARYVRTNGASYAYTTAAFGRRIGIYVGVTHAITASIAWGVLASFFVSTLLRVAFPDKAW 127
AA+YV+TNG+SYAYTTAAFG RIGIYVGVTHAITASIAWGVLAS FVSTLLRVAFP+K W
Sbjct 166 AAKYVKTNGSSYAYTTAAFGHRIGIYVGVTHAITASIAWGVLASSFVSTLLRVAFPEKIW 225
Query 128 ADAEQLFSVKTLTFLGFIGVLLAINLFGNRAIKWANGTSTVGKAFALSAFIVGGLWIITT 187
AD ++L SVKTLTFL FI VLLAIN+FGN I+WANG S +GK FALS FI GGLW I T
Sbjct 226 ADNDELISVKTLTFLVFIAVLLAINIFGNLVIRWANGISALGKIFALSVFIAGGLWTIIT 285
Query 188 QHVNNYATAWSAYSATPYSLLGVAEIGKGTFSSMALATIVALYAFTGFESIANAAEEMDA 247
QHVNNY T+ SAY T YSLLGV EIGK T +SM LATIVALYAFTGFESIANAAEEM+
Sbjct 286 QHVNNYVTSRSAYQPTTYSLLGVTEIGKSTAASMTLATIVALYAFTGFESIANAAEEMNT 345
Query 248 PDRNLPRAIPIAIFSVGAIYLLTLTVAMLLGSNKIAASDDTVKLAAAIGNATFRTIIVVG 307
PDR LP+AIP+ I +VG IY+L L VAMLLGS+KI A++ TVKLAAA+GN TFRTIIVVG
Sbjct 346 PDRTLPKAIPLTILTVGVIYILALVVAMLLGSDKIVATNHTVKLAAAVGNNTFRTIIVVG 405
Query 308 ALISMFGINVAASFGAPRLWTALADSGVLPTRLSRKNQYDVPMVSFAITASLALAFPLAL 367
AL+SMFGINVAASFGAPRLWTAL+D +LPTRLS KN++ VP+V+F ITA L LAFPL+L
Sbjct 406 ALVSMFGINVAASFGAPRLWTALSDGRILPTRLSSKNRFGVPIVAFGITAFLTLAFPLSL 465
Query 368 RFDNLHLTGLAVIARFVQFIIVPIALIALARSQAVEHAAVRRNAFTDKVLPLVAIVVSVG 427
RFD+L+LTGLAVIARF+QFIIVPIAL ALARS+ V+RN FTDKVLP+ A+VVS G
Sbjct 466 RFDSLNLTGLAVIARFIQFIIVPIALFALARSRTTNSVYVKRNVFTDKVLPITAVVVSAG 525
Query 428 LAVSYDYRCIFLVRGGPNYFSIALIVITFIVVPAMAYLHYYR 469
L VS+DYR IFL RGGPNYFSI+LI ITFI +PA+AYLHYYR
Sbjct 526 LMVSFDYRSIFLTRGGPNYFSISLIAITFIGIPAVAYLHYYR 567
>gi|408779234|ref|ZP_11191007.1| permease [Mycobacterium kansasii ATCC 12478]
Length=456
Score = 621 bits (1601), Expect = 1e-175, Method: Compositional matrix adjust.
Identities = 323/456 (71%), Positives = 383/456 (84%), Gaps = 3/456 (0%)
Query 21 MLGINSIIGAGIFLTPGEVIGLAGPFAPMAYVLAGIFAGVVAIVFATAARYVRTNGASYA 80
MLGINSIIGAGIFLTPG VI LAGP+AP+AY+LAG+FAG++A+VFA+AARYV+TNGASYA
Sbjct 1 MLGINSIIGAGIFLTPGTVIKLAGPWAPVAYILAGVFAGIMALVFASAARYVKTNGASYA 60
Query 81 YTTAAFGRRIGIYVGVTHAITASIAWGVLASFFVSTLLRVAFPDKAWADAEQLFSVKTLT 140
YTTAAFG++IGIYVGVTHAI ASIAWGVLAS FVSTLL+VAFP+K WAD L SVKTLT
Sbjct 61 YTTAAFGQKIGIYVGVTHAIVASIAWGVLASLFVSTLLKVAFPEKNWADDSGLLSVKTLT 120
Query 141 FLGFIGVLLAINLFGNRAIKWANGTSTVGKAFALSAFIVGGLWIITTQHVNNYATAWSA- 199
FLGFI VLL IN+FGNRAIKWANGTST+GK ALS FIVGGLW++ T H ++Y TA ++
Sbjct 121 FLGFIVVLLVINIFGNRAIKWANGTSTIGKVSALSVFIVGGLWLLVTHHPSHYGTASASG 180
Query 200 -YSATPYSLLGVAEIGKGTFSSMALATIVALYAFTGFESIANAAEEMDAPDRNLPRAIPI 258
Y PY+L G ++ G S + LATI ALYAFTGFESIANAAEEM P+R LP+AIP+
Sbjct 181 VYQPAPYALFGGIQLAHGAVSGLILATIAALYAFTGFESIANAAEEMYEPERTLPKAIPV 240
Query 259 AIFSVGAIYLLTLTVAMLLGSNKIAASDDTVKLAAAIGNATFRTIIVVGALISMFGINVA 318
AI VGA+Y+L + VAMLLGS+K+ SD TV+LAAAI + RT +V+GALISMFGINVA
Sbjct 241 AILGVGAVYVLAVAVAMLLGSDKVFESDATVRLAAAIDDGPLRTTVVLGALISMFGINVA 300
Query 319 ASFGAPRLWTALADSGVLPTRLSRKNQYDVPMVSFAITASLALAFPLALRFDNLHLTGLA 378
ASFGAPR+WTAL+D+ +LP RLS +N++ VPM++FAITASLALAFPLALRFD+++L GLA
Sbjct 301 ASFGAPRVWTALSDTRILPARLSTQNRFGVPMIAFAITASLALAFPLALRFDSVNLIGLA 360
Query 379 VIARFVQFIIVPIALIALARSQAVEHAAVRRNAFTDKVLPLVAIVVSVGLAVSYDYRCIF 438
VIARF+QFIIVP+AL+ALAR A HA +RN TDKVLP+ A+ VSV LAVS+DYR IF
Sbjct 361 VIARFIQFIIVPVALVALARDTAGSHATAKRNPLTDKVLPIAAVTVSVALAVSFDYRTIF 420
Query 439 LV-RGGPNYFSIALIVITFIVVPAMAYLHYYRIIRR 473
+GG NYFSIAL+VITF+VVPA+AYLHYYR R
Sbjct 421 ATPQGGANYFSIALMVITFLVVPAIAYLHYYRTCDR 456
>gi|383307791|ref|YP_005360602.1| permease [Mycobacterium tuberculosis RGTB327]
gi|380721744|gb|AFE16853.1| permease [Mycobacterium tuberculosis RGTB327]
Length=508
Score = 367 bits (942), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 185/185 (100%), Positives = 185/185 (100%), Gaps = 0/185 (0%)
Query 21 MLGINSIIGAGIFLTPGEVIGLAGPFAPMAYVLAGIFAGVVAIVFATAARYVRTNGASYA 80
MLGINSIIGAGIFLTPGEVIGLAGPFAPMAYVLAGIFAGVVAIVFATAARYVRTNGASYA
Sbjct 1 MLGINSIIGAGIFLTPGEVIGLAGPFAPMAYVLAGIFAGVVAIVFATAARYVRTNGASYA 60
Query 81 YTTAAFGRRIGIYVGVTHAITASIAWGVLASFFVSTLLRVAFPDKAWADAEQLFSVKTLT 140
YTTAAFGRRIGIYVGVTHAITASIAWGVLASFFVSTLLRVAFPDKAWADAEQLFSVKTLT
Sbjct 61 YTTAAFGRRIGIYVGVTHAITASIAWGVLASFFVSTLLRVAFPDKAWADAEQLFSVKTLT 120
Query 141 FLGFIGVLLAINLFGNRAIKWANGTSTVGKAFALSAFIVGGLWIITTQHVNNYATAWSAY 200
FLGFIGVLLAINLFGNRAIKWANGTSTVGKAFALSAFIVGGLWIITTQHVNNYATAWSAY
Sbjct 121 FLGFIGVLLAINLFGNRAIKWANGTSTVGKAFALSAFIVGGLWIITTQHVNNYATAWSAY 180
Query 201 SATPY 205
SATPY
Sbjct 181 SATPY 185
>gi|336055122|ref|YP_004563409.1| amino acid permease [Lactobacillus kefiranofaciens ZW3]
gi|333958499|gb|AEG41307.1| Amino acid permease [Lactobacillus kefiranofaciens ZW3]
Length=464
Score = 315 bits (807), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 175/456 (39%), Positives = 282/456 (62%), Gaps = 18/456 (3%)
Query 12 HKLGFCSVVMLGINSIIGAGIFLTPGEVIGLAGPFAPMAYVLAGIFAGVVAIVFATAARY 71
KLGF S+V+L IN+IIG+GIFLTPG V+ AG A + Y++A IFA ++AI FA A++Y
Sbjct 7 DKLGFWSIVLLAINAIIGSGIFLTPGSVVQQAGSKALVVYLIAAIFASILAISFAAASKY 66
Query 72 VRTNGASYAYTTAAFGRRIGIYVGVTHAITASIAWGVLASFFVSTLLRVAFPDKAWADAE 131
V +GA+YAY+ AAFG+++G Y+GV +AS+AWGV+A + + + + D
Sbjct 67 VTKSGAAYAYSKAAFGKKVGFYMGVLRYFSASVAWGVMAVGVIKSTISIF-----GGDPN 121
Query 132 QLFSVKTLTFLGFIGVLLAINLFGNRAIKWANGTSTVGKAFALSAFIVGGLWIITTQHVN 191
+ SV T+ FL + ++ INLFG R +KW +T+GK AL IV G+ ++ T +
Sbjct 122 KTMSV-TIGFLVLMAIITIINLFGQRVLKWVMNLATIGKLAALVLIIVAGVVLLITTGAS 180
Query 192 NYATAWSAYSATPYSLLGVAEIGKGTFSSMALATIVALYAFTGFESIANAAEEMDAPDRN 251
++ + G + T ++ +A + A YAFTGFES+A+ +E+M+ P++N
Sbjct 181 SHMAEVDQITQN-----GQKIVPTLTTTTFVMAIVSAFYAFTGFESVASGSEDMEDPEKN 235
Query 252 LPRAIPIAIFSVGAIYLLTLTVAMLLGSNKIAASDDTVKLAAAIGNATFRTIIVVGALIS 311
LPRAIP+AI + IY+ + VAM+L + + V +AA N R II+VGAL+S
Sbjct 236 LPRAIPLAILVIALIYIGVVAVAMVLNPKALMTTKQVVAVAAIFNNEILRDIILVGALVS 295
Query 312 MFGINVAASFGAPRLWTALADSGVLPTRLSRKNQYDVPMVSFAITASLALAFPLALRFDN 371
MFGINVA+SF APR+ A+A G + L+++ + + P+ +F I+ +LA+ P+A ++
Sbjct 296 MFGINVASSFNAPRILEAMAREGQMSKALTKRTKNNFPIRTFFISVALAILIPMAFEYNM 355
Query 372 LHLTGLAVIARFVQFIIVPIALIALARSQAVEHA-AVRRNAFTDKVLPLVAIVVSVGLAV 430
++L L+ + RF+ FI+VP+A+I R +A E +N TD V P+++I+V V L +
Sbjct 356 VNLITLSAMVRFLGFIVVPLAVIQFYRGKASEDVLPADKNVVTDVVAPILSIIVVVFLLI 415
Query 431 SYDYRCIFLVRG------GPNYFSIALIVITFIVVP 460
Y+++ F V G N+++IA+++ F+++P
Sbjct 416 EYNWKAQFGVMNASGQVIGVNWYAIAMMIFGFVILP 451
>gi|385818387|ref|YP_005854777.1| amino acid permease [Lactobacillus amylovorus GRL1118]
gi|327184325|gb|AEA32772.1| amino acid permease [Lactobacillus amylovorus GRL1118]
Length=463
Score = 311 bits (796), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 177/459 (39%), Positives = 283/459 (62%), Gaps = 24/459 (5%)
Query 12 HKLGFCSVVMLGINSIIGAGIFLTPGEVIGLAGPFAPMAYVLAGIFAGVVAIVFATAARY 71
KLGF S+V+L IN+IIG+GIFLTPG V+ AG A + Y +A IFA ++A+ FA A++Y
Sbjct 7 DKLGFWSIVLLAINAIIGSGIFLTPGSVVQQAGSKALIVYFIAAIFASILAVSFAAASKY 66
Query 72 VRTNGASYAYTTAAFGRRIGIYVGVTHAITASIAWGVLASFFVSTLLRV--AFPDKAWAD 129
V +GA+YAY+ AAFG ++G Y+GV +AS+AWGV+A + + + + P+KA
Sbjct 67 VTKSGAAYAYSKAAFGEKVGFYMGVLRYFSASVAWGVMAVGVIKSTISIFGGDPNKA--- 123
Query 130 AEQLFSVKTLTFLGFIGVLLAINLFGNRAIKWANGTSTVGKAFALSAFIVGG-LWIITTQ 188
+V T+ FL + ++ INLFG R +KW +T+GK AL I+ G + +ITT
Sbjct 124 ----LNV-TVGFLILMAIITIINLFGQRVLKWVMNLATIGKLAALVLIIIAGVILLITTG 178
Query 189 HVNNYATAWSAYSATPYSLLGVAEIGKGTFSSMALATIVALYAFTGFESIANAAEEMDAP 248
+N + + G + T ++ +A + A YAFTGFES+A+ +++M P
Sbjct 179 ASSNLS------EVDQINQNGQKIVPTLTTTTFVMAIVSAFYAFTGFESVASGSDDMKDP 232
Query 249 DRNLPRAIPIAIFSVGAIYLLTLTVAMLLGSNKIAASDDTVKLAAAIGNATFRTIIVVGA 308
++NLPRAIP+AI + +Y+ + VAM+L + + V +AA N R +I+VGA
Sbjct 233 EKNLPRAIPLAILIIAVVYIGVVAVAMVLNPKALMTTKQVVAVAAIFKNEILRDVILVGA 292
Query 309 LISMFGINVAASFGAPRLWTALADSGVLPTRLSRKNQYDVPMVSFAITASLALAFPLALR 368
L+SMFGINVA+SF APR+ A+A G + L+++ + + P+ +F I+ LA+ P+A
Sbjct 293 LVSMFGINVASSFNAPRILEAMAREGQMSKALTKRTKNNFPIRTFFISVGLAILIPMAFE 352
Query 369 FDNLHLTGLAVIARFVQFIIVPIALIALARSQAVEHA-AVRRNAFTDKVLPLVAIVVSVG 427
++ ++L L+ + RF+ FI+VPIA+I R + E +NA+TD V+P+++IV+ V
Sbjct 353 YNMVNLITLSAMVRFLGFIVVPIAVIQFYRGKTKEEVLKADKNAWTDVVVPILSIVIVVF 412
Query 428 LAVSYDYRCIFLVRG------GPNYFSIALIVITFIVVP 460
L V Y+++ F V G N+++IA++V F+++P
Sbjct 413 LLVEYNWKAQFGVANAAGQIVGVNWYAIAMMVFGFVILP 451
>gi|319891363|ref|YP_004148238.1| amino acid permease [Staphylococcus pseudintermedius HKU10-03]
gi|386320293|ref|YP_006016456.1| amino acid permease [Staphylococcus pseudintermedius ED99]
gi|317161059|gb|ADV04602.1| putative amino acid permease [Staphylococcus pseudintermedius
HKU10-03]
gi|323465464|gb|ADX77617.1| amino acid permease [Staphylococcus pseudintermedius ED99]
Length=461
Score = 310 bits (795), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 179/460 (39%), Positives = 283/460 (62%), Gaps = 23/460 (5%)
Query 11 IHKLGFCSVVMLGINSIIGAGIFLTPGEVIGLAGPFAPMAYVLAGIFAGVVAIVFATAAR 70
+ KLGF S+V+L INSIIG+GIFLTPG VI ++G + P+ YV+A IFA ++A+ FA+A++
Sbjct 1 MKKLGFWSIVLLSINSIIGSGIFLTPGSVIRISGIYTPLIYVMAAIFASILALTFASASK 60
Query 71 YVRTNGASYAYTTAAFGRRIGIYVGVTHAITASIAWGVLASFFVSTLLRVAFPDKAWADA 130
YV +GA+Y+YT A G IG YVG+T I SIAWGV+A+ V T++ + D DA
Sbjct 61 YVNKSGAAYSYTMVALGPHIGFYVGITRFIAGSIAWGVMATAVVKTVITIFGGDHT--DA 118
Query 131 EQLFSVKTLTFLGFIGVLLAINLFGNRAIKWANGTSTVGKAFALSAFIVGGLWIITTQHV 190
+ TL F+ +G+LL IN+ G + W + ST+GK AL I+ GL+++ +
Sbjct 119 RLI----TLGFILLMGILLLINVLGKHLLVWVSNLSTIGKIAALLTVIISGLYLV----I 170
Query 191 NNYATAWSAYSATPYSLLGVAEIGKGTFSSMALATIVALYAFTGFESIANAAEEMDAPDR 250
T +S S +L+ ++I F +A I A YAFTGFESIA A++M +P++
Sbjct 171 QTGDTQFSRIS----TLVDTSQIDSQAF---VMAIIAAFYAFTGFESIATGAQDMKSPEK 223
Query 251 NLPRAIPIAIFSVGAIYLLTLTVAMLLGSNKIAASDDTVKLAAAIGNATFRTIIVVGALI 310
NLPRAIP+AIF + IY+ +++ M + + + + V L A II+ G+LI
Sbjct 224 NLPRAIPLAIFMIAFIYIGVISITMTINPVALIQTKEVVSLVAVFDTPVIHRIILYGSLI 283
Query 311 SMFGINVAASFGAPRLWTALADSGVLPTRLSRKNQYDVPMVSFAITASLALAFPLALRFD 370
SMFGINVAASF PR+ A+A G +P ++ YD P+ +F +T +A+A PLA +++
Sbjct 284 SMFGINVAASFSTPRIIEAIAHEGQIPKWFKKRTVYDFPLPAFMLTFLIAIAIPLAFQYN 343
Query 371 NLHLTGLAVIARFVQFIIVPIALIAL--ARSQAVEHAAVRRNAFTDKVLPLVAIVVSVGL 428
+ L+ I+RF+Q++IVPI +I ++ A +R+N FTD +LP+ + V+++ L
Sbjct 344 LTSIILLSSISRFIQYLIVPICVILFYYGKTSAPTLNHIRKNFFTDVLLPIFSFVLTLVL 403
Query 429 AVSYDYRCIFLVRGGP----NYFSIALIVITFIVVPAMAY 464
+ ++++ FL+ NY +A +V+++++ P + Y
Sbjct 404 LIKFNWKGQFLITNDAVTSFNYLGVASLVLSYVIFPIILY 443
>gi|315039204|ref|YP_004032772.1| amino acid permease [Lactobacillus amylovorus GRL 1112]
gi|325957678|ref|YP_004293090.1| amino acid permease [Lactobacillus acidophilus 30SC]
gi|312277337|gb|ADQ59977.1| amino acid permease [Lactobacillus amylovorus GRL 1112]
gi|325334243|gb|ADZ08151.1| amino acid permease [Lactobacillus acidophilus 30SC]
Length=463
Score = 310 bits (795), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 177/459 (39%), Positives = 283/459 (62%), Gaps = 24/459 (5%)
Query 12 HKLGFCSVVMLGINSIIGAGIFLTPGEVIGLAGPFAPMAYVLAGIFAGVVAIVFATAARY 71
KLGF S+V+L IN+IIG+GIFLTPG V+ AG A + Y +A IFA ++A+ FA A++Y
Sbjct 7 DKLGFWSIVLLAINAIIGSGIFLTPGSVVQQAGSKALIVYFIAAIFASILAVSFAAASKY 66
Query 72 VRTNGASYAYTTAAFGRRIGIYVGVTHAITASIAWGVLASFFVSTLLRV--AFPDKAWAD 129
V +GA+YAY+ AAFG ++G Y+GV +AS+AWGV+A + + + + P+KA
Sbjct 67 VTKSGAAYAYSKAAFGEKVGFYMGVLRYFSASVAWGVMAVGVIKSTISIFGGDPNKA--- 123
Query 130 AEQLFSVKTLTFLGFIGVLLAINLFGNRAIKWANGTSTVGKAFALSAFIVGG-LWIITTQ 188
+V T+ FL + ++ INLFG R +KW +T+GK AL I+ G + +ITT
Sbjct 124 ----LNV-TVGFLILMAIITIINLFGQRVLKWVMNLATIGKLAALVLIIIAGVILLITTG 178
Query 189 HVNNYATAWSAYSATPYSLLGVAEIGKGTFSSMALATIVALYAFTGFESIANAAEEMDAP 248
+N + + G + T ++ +A + A YAFTGFES+A+ +++M P
Sbjct 179 ASSNLS------EVDQINQNGQKIVPTLTTTTFVMAIVSAFYAFTGFESVASGSDDMKDP 232
Query 249 DRNLPRAIPIAIFSVGAIYLLTLTVAMLLGSNKIAASDDTVKLAAAIGNATFRTIIVVGA 308
++NLPRAIP+AI + +Y+ + VAM+L + + V +AA N R +I+VGA
Sbjct 233 EKNLPRAIPLAILIIAVVYIGVVAVAMVLNPRALMTTKQVVAVAAIFKNEILRDVILVGA 292
Query 309 LISMFGINVAASFGAPRLWTALADSGVLPTRLSRKNQYDVPMVSFAITASLALAFPLALR 368
L+SMFGINVA+SF APR+ A+A G + L+++ + + P+ +F I+ LA+ P+A
Sbjct 293 LVSMFGINVASSFNAPRILEAMAREGQMSKALTKRTKNNFPIRTFFISVGLAILIPMAFE 352
Query 369 FDNLHLTGLAVIARFVQFIIVPIALIALARSQAVEHA-AVRRNAFTDKVLPLVAIVVSVG 427
++ ++L L+ + RF+ FI+VPIA+I R + E +NA+TD V+P+++IV+ V
Sbjct 353 YNMVNLITLSAMVRFLGFIVVPIAVIQFYRGKTKEEVLKADKNAWTDVVVPILSIVIVVF 412
Query 428 LAVSYDYRCIFLVRG------GPNYFSIALIVITFIVVP 460
L V Y+++ F V G N+++IA++V F+++P
Sbjct 413 LLVEYNWKAQFGVANAAGQIVGVNWYAIAMMVFGFVILP 451
>gi|406658791|ref|ZP_11066931.1| APC family amino acid transporter [Streptococcus iniae 9117]
gi|405579006|gb|EKB53120.1| APC family amino acid transporter [Streptococcus iniae 9117]
Length=463
Score = 306 bits (785), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 193/458 (43%), Positives = 276/458 (61%), Gaps = 22/458 (4%)
Query 12 HKLGFCSVVMLGINSIIGAGIFLTPGEVIGLAGPFAPMAYVLAGIFAGVVAIVFATAARY 71
KLGF S+V+L INSIIG GIFL+PG V+ ++G A + Y A IFA V+AI FA AA+Y
Sbjct 3 KKLGFYSIVLLTINSIIGTGIFLSPGSVVAMSGDKALLVYAFAAIFAAVLAITFAAAAKY 62
Query 72 VRTNGASYAYTTAAFGRRIGIYVGVTHAITASIAWGVLASFFVSTLLRVAFPDKAWADAE 131
V GA+YAYT AAFG +G YVG+T I ASIAWGV+ + V T+L + D
Sbjct 63 VSKGGAAYAYTKAAFGDNLGFYVGITRYIAASIAWGVMGTGVVKTVLNIMHLDSTK---- 118
Query 132 QLFSVKTLTFLGFIGVLLAINLFGNRAIKWANGTSTVGKAFALSAFIVGGLWIITTQHVN 191
S T+ F+ +G+LL INL G R + N ST+GK AL IV G I+ HVN
Sbjct 119 --ISNITIGFMCLMGILLVINLMGTRLFELINNLSTLGKLGALIMTIVVGCGIVIFGHVN 176
Query 192 NYATAWSAYSATPYSLLGVAEIGKGTFSSMALATIVALYAFTGFESIANAAEEMDAPDRN 251
++T + A +G S+ +A I A YAFTGFES+A+ +E+M+ P++N
Sbjct 177 QFSTIHTLKDA-----MGNPVGSNLDMSAWVMAVIAAFYAFTGFESVASGSEDMEEPEKN 231
Query 252 LPRAIPIAIFSVGAIYLLTLTVAMLLGSNKIAASDDTVKLAAAIGNATFRTIIVVGALIS 311
LPRAIP+AI + AIY+ + +AM++ I AS V LA N +I++GALIS
Sbjct 232 LPRAIPLAIAIIAAIYIGIVGIAMMINPGAIVASSQVVALADVFTNPIISNLIILGALIS 291
Query 312 MFGINVAASFGAPRLWTALADSGVLPTRLSRKNQYDVPMVSFAITASLALAFPLALRFDN 371
MFGINVAASF PR+ A+A G +P +++ PMV+F T +A+ P+A RF+
Sbjct 292 MFGINVAASFHTPRVLEAMALQGQIPEYFAKRTDKGFPMVAFFTTIGIAILLPMAFRFNM 351
Query 372 LHLTGLAVIARFVQFIIVPIALIAL----ARSQAVEHAAVRRNAFTDKVLPLVAIVVSVG 427
+ L+ I+RF+QFIIVP+A++ + +A+++ VR+N F D V+P +A+V++V
Sbjct 352 TSIIVLSSISRFIQFIIVPLAVMTFYFGKEKGEALQN--VRKNVFVDVVIPSIALVLTVV 409
Query 428 LAVSYDYRCIF---LVRGG--PNYFSIALIVITFIVVP 460
L + + F L G PN F+I +VI ++++P
Sbjct 410 LLYKFSWAQQFTLTLDNGQVVPNTFAIVAMVIGYVILP 447
>gi|304438962|ref|ZP_07398885.1| arginine permease [Peptoniphilus duerdenii ATCC BAA-1640]
gi|304372628|gb|EFM26211.1| arginine permease [Peptoniphilus duerdenii ATCC BAA-1640]
Length=459
Score = 303 bits (775), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 181/469 (39%), Positives = 283/469 (61%), Gaps = 19/469 (4%)
Query 12 HKLGFCSVVMLGINSIIGAGIFLTPGEVIGLAGPFAPMAYVLAGIFAGVVAIVFATAARY 71
KLGF S+V+L INSIIG GIFL+PG V+ +G A M Y LA IF+ V+A+ FA AA+Y
Sbjct 3 KKLGFYSIVLLTINSIIGTGIFLSPGSVVAKSGNKALMVYALAAIFSAVLAVTFAAAAKY 62
Query 72 VRTNGASYAYTTAAFGRRIGIYVGVTHAITASIAWGVLASFFVSTLLRVAFPDKAWADAE 131
V GA+YAYT AAFG +G YVG+T + A IAWGV+ + V T+L++ + E
Sbjct 63 VSKGGAAYAYTKAAFGDDLGYYVGITRYVAAGIAWGVMGTAVVKTVLKIF-----GLNYE 117
Query 132 QLFSVKTLTFLGFIGVLLAINLFGNRAIKWANGTSTVGKAFALSAFIVGGLWIITTQHVN 191
L +V T+ F+ +G+L+ INL G R + N ST+GK AL I+ GL ++ N
Sbjct 118 SLTTV-TIGFMVLMGILMIINLLGTRVFEIINNLSTIGKVGALVTTIIVGLVMVLFLGEN 176
Query 192 NYATAWSAYSATPYSLLGVAEIGKGTFSSMALATIVALYAFTGFESIANAAEEMDAPDRN 251
NY +A + + +LG + A I A YAFTGFES+A+A+E+M+ P++N
Sbjct 177 NY-SAINNLTDDAGQVLG----SNLDITGWVTAVIAAFYAFTGFESVASASEDMEEPEKN 231
Query 252 LPRAIPIAIFSVGAIYLLTLTVAMLLGSNKIAASDDTVKLAAAIGNATFRTIIVVGALIS 311
LPRAIP+AI + IY+ + +AM + + S + V LA N R +I+ GAL+S
Sbjct 232 LPRAIPLAIGIIAVIYMGIVGIAMAINPEALVTSKEVVALADVFSNRIIRNLIIGGALVS 291
Query 312 MFGINVAASFGAPRLWTALADSGVLPTRLSRKNQYDVPMVSFAITASLALAFPLALRFDN 371
MFGINVAASFG PR+ ++++ G +P S++ + P+ SF T ++A+ PLA +F+
Sbjct 292 MFGINVAASFGTPRILESMSNQGQVPKIFSKRTENGFPIASFLTTITIAVVIPLAFKFNM 351
Query 372 LHLTGLAVIARFVQFIIVPIALIALARSQAVEHAA--VRRNAFTDKVLPLVAIVVSVGLA 429
+ ++ I+RF+QF+IVPI++I + E V+RN TD ++P++A+ +++ L
Sbjct 352 ASIMIISSISRFIQFVIVPISIIMFYYGKQKEEVMPNVKRNFATDVIIPIIALGLTLVLL 411
Query 430 VSYDYRCIFLV-----RGGPNYFSIALIVITFIVVPAMAYLHYYRIIRR 473
+++ F + N F+I +++ ++V+PA+ + + +I R+
Sbjct 412 YKFNWVGQFTTVDDSGQTHANMFAIISMIVGYVVLPAV-LMTWSKIKRK 459
>gi|395244088|ref|ZP_10421064.1| Amino acid transporter [Lactobacillus hominis CRBIP 24.179]
gi|394483696|emb|CCI82072.1| Amino acid transporter [Lactobacillus hominis CRBIP 24.179]
Length=466
Score = 303 bits (775), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 172/463 (38%), Positives = 277/463 (60%), Gaps = 22/463 (4%)
Query 12 HKLGFCSVVMLGINSIIGAGIFLTPGEVIGLAGPFAPMAYVLAGIFAGVVAIVFATAARY 71
KLGF S+V+L IN+IIG+GIFLTPG V+ AG A + Y++A + A V+AI FA AA+Y
Sbjct 7 DKLGFWSIVLLAINAIIGSGIFLTPGSVVQQAGSKALIVYLIAALIASVLAISFAAAAKY 66
Query 72 VRTNGASYAYTTAAFGRRIGIYVGVTHAITASIAWGVLASFFVSTLLRV--AFPDKAWAD 129
V +GA+YAY+ AAFG +G Y+G+ +AS+AWGV+A + + + + P+ W
Sbjct 67 VTKSGAAYAYSKAAFGNNVGFYMGILRYFSASVAWGVMAVGVIKSTISIFGGNPNNNWN- 125
Query 130 AEQLFSVKTLTFLGFIGVLLAINLFGNRAIKWANGTSTVGKAFALSAFIVGGLWIITTQH 189
T FL + V+ INLFG + +K+ +T+GK AL IV G+ ++ T
Sbjct 126 -------VTWGFLILMAVITIINLFGQKVLKYVMNMATIGKLAALVLIIVAGVILLITTG 178
Query 190 VNNYATAWSAYSATPYSLLGVAEIGKGTFSSMALATIVALYAFTGFESIANAAEEMDAPD 249
++ + G + T + +A + A YAFTGFES+A+ +++M P+
Sbjct 179 ASSNLNEVDQLTQN-----GQKIVPALTTTGFVMAVVSAFYAFTGFESVASGSDDMQDPE 233
Query 250 RNLPRAIPIAIFSVGAIYLLTLTVAMLLGSNKIAASDDTVKLAAAIGNATFRTIIVVGAL 309
+NLPRAIP+AI + +Y+ + VAM+L + + V +AA N R +I+VGAL
Sbjct 234 KNLPRAIPLAILVIAIVYIGVVAVAMILNPRALMTTKQVVAIAAIFQNEILRDVILVGAL 293
Query 310 ISMFGINVAASFGAPRLWTALADSGVLPTRLSRKNQYDVPMVSFAITASLALAFPLALRF 369
+SMFGINVA+SF APR+ A+A L L+++ + + P+ +F I+ LA+ P+A +
Sbjct 294 VSMFGINVASSFNAPRILEAMARENQLSKALTKRTKNNFPIRTFFISVGLAILIPMAFEY 353
Query 370 DNLHLTGLAVIARFVQFIIVPIALIALARSQAVEHA-AVRRNAFTDKVLPLVAIVVSVGL 428
+ ++L L+ + RF+ FI+VP+A+I R ++ E RN +TD V P+V+I++ + L
Sbjct 354 NMVNLITLSAMVRFLGFIVVPLAVIQFFRGKSKEQVLDAPRNIWTDVVAPVVSIILVIFL 413
Query 429 AVSYDYRCIFLVRG------GPNYFSIALIVITFIVVPAMAYL 465
V Y++R F + G N+++IA+++ FI++PA+ +L
Sbjct 414 LVEYNWRAQFGIMNAKGEFVGLNWYAIAMMIFGFIILPAIMFL 456
>gi|310658054|ref|YP_003935775.1| arginine permease [Clostridium sticklandii DSM 519]
gi|308824832|emb|CBH20870.1| Arginine permease [[Clostridium] sticklandii]
Length=474
Score = 302 bits (774), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 181/463 (40%), Positives = 280/463 (61%), Gaps = 17/463 (3%)
Query 12 HKLGFCSVVMLGINSIIGAGIFLTPGEVIGLAGPFAPMAYVLAGIFAGVVAIVFATAARY 71
K GF S+V+L IN IIG GIFL+P V+ +AG + P+ Y+LAG+FA ++AI FA+AA+Y
Sbjct 3 KKFGFWSIVLLTINGIIGTGIFLSPAGVVKVAGTYTPLVYILAGLFAIILAITFASAAKY 62
Query 72 VRTNGASYAYTTAAFGRRIGIYVGVTHAITASIAWGVLASFFVSTLLRVAFPDKAWADAE 131
+ NG+ YAY+ AAFG +G YVG+T SIAWGV+A+ V T L + DA+
Sbjct 63 ISKNGSGYAYSKAAFGNEVGYYVGITRFAAGSIAWGVMATAVVRTTLGIF----GGPDAQ 118
Query 132 QLFSVKTLTFLGFIGVLLAINLFGNRAIKWANGTSTVGKAFALSAFIVGGLWIITTQHVN 191
++ TL FL +G+LLAI G+ K A+ ST+GK AL + GL I N
Sbjct 119 TQGNI-TLGFLILMGILLAIVFSGSYITKIASNISTIGKITALLVAVFAGLAIFLKTGQN 177
Query 192 NYATAWSAYSATPYSLLGVAEIGKGTFSSMALATIVALYAFTGFESIANAAEEMDAPDRN 251
N+ + A L V + F LA A YA+TGFES+A+AA EM+ P++N
Sbjct 178 NFMSINQAVDTA--GELIVKPMDASIFVGAILA---AFYAYTGFESVASAASEMEEPEKN 232
Query 252 LPRAIPIAIFSVGAIYLLTLTVAMLLGSNKIAASDDTVKLAAAIGNATFRTIIVVGALIS 311
LP+AIP+AI V IY+ +++AM++ I S + V LA+A N + II+ GA+IS
Sbjct 233 LPKAIPLAIGIVALIYVSVVSIAMIINPEGILNSTEPVILASAFLNPLIKNIIIYGAVIS 292
Query 312 MFGINVAASFGAPRLWTALADSGVLPTRLSRKNQYDVPMVSFAITASLALAFPLALRFDN 371
MFGIN+AA+F PR++ A+AD G LP LS+K + VP+ +F +TAS+A+A P+A +++
Sbjct 293 MFGINIAAAFSTPRIFEAMADEGQLPIFLSKKTKQGVPLFAFLVTASMAIAVPMAFQYNM 352
Query 372 LHLTGLAVIARFVQFIIVPIALIAL--ARSQAVEHAAVRRNAFTDKVLPLVAIVVSVGLA 429
+ ++ ++RF+QF++VP+A+I +++ + ++ FTD V+P++A V S L
Sbjct 353 RGIMIISSVSRFIQFLVVPMAVIMFYYDKNKEPKIETAQKMFFTDVVIPILAFVTSAFLL 412
Query 430 VSYDYRCIFLVRGGP-----NYFSIALIVITFIVVPAMAYLHY 467
+ + F + N ++I ++I ++++P Y+ Y
Sbjct 413 YKFSWADQFSMVNDNGETVVNTYAICAMIIGYVILPIGVYIPY 455
>gi|383845658|gb|EID83058.1| amino acid permease [Streptococcus intermedius SK54]
Length=457
Score = 301 bits (771), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 185/458 (41%), Positives = 275/458 (61%), Gaps = 22/458 (4%)
Query 12 HKLGFCSVVMLGINSIIGAGIFLTPGEVIGLAGPFAPMAYVLAGIFAGVVAIVFATAARY 71
KLGF S+V+L INSIIG GIFL+PG V+ AG A Y++A +FA V+A+ FA+AA+Y
Sbjct 3 KKLGFYSIVLLTINSIIGTGIFLSPGSVVATAGDKALSIYLMAAVFASVLAVTFASAAKY 62
Query 72 VRTNGASYAYTTAAFGRRIGIYVGVTHAITASIAWGVLASFFVSTLLRVAFPDKAWADAE 131
V GASYAY AAFG IG YVG+T I ASIAWGVL + V T+L + D+
Sbjct 63 VAQGGASYAYAKAAFGENIGFYVGITRFIAASIAWGVLGTAVVKTVLNIF-----RLDSS 117
Query 132 QLFSVKTLTFLGFIGVLLAINLFGNRAIKWANGTSTVGKAFALSAFIVGGLWIITTQHVN 191
L + T+ F+ +G+L+ INL G + + N ST+GK AL I+ G+ II VN
Sbjct 118 NLVLI-TIGFVFLMGILMGINLLGTQIFELINNLSTIGKVGALLTTILVGVGIILLTGVN 176
Query 192 NYATAWSAYSATPYSLLGVAEIGKGTFSSMALATIVALYAFTGFESIANAAEEMDAPDRN 251
+ T + A L ++ S A I A YAFTGFES+A+ A++M+AP++N
Sbjct 177 EFNTIKNLTDAAGTKLGANLDL-----SGYVTAVIAAFYAFTGFESVASGAQDMEAPEKN 231
Query 252 LPRAIPIAIFSVGAIYLLTLTVAMLLGSNKIAASDDTVKLAAAIGNATFRTIIVVGALIS 311
LP+AIP+AI + IY+ + +AM++ I A+ + V LAA N RTII+VGALIS
Sbjct 232 LPKAIPLAIGIIAVIYIGIVGIAMMINPAAIVATKEVVALAAVFTNPIIRTIILVGALIS 291
Query 312 MFGINVAASFGAPRLWTALADSGVLPTRLSRKNQYDVPMVSFAITASLALAFPLALRFDN 371
MFGINVAASF PR+ A+A G +P ++ + P +F +T +A+ P+A R++
Sbjct 292 MFGINVAASFHTPRILEAMALQGQVPEWFKKRTENGFPTRAFFVTIGIAILLPMAFRYNM 351
Query 372 LHLTGLAVIARFVQFIIVPIALIAL----ARSQAVEHAAVRRNAFTDKVLPLVAIVVSVG 427
+ L+ I+RF+QF++VP+A+I + VE A +++ TD ++P + +++
Sbjct 352 TSIIVLSSISRFIQFLVVPVAVIIFYFGKQKESIVETA--KKSFTTDVIIPFLGAILTAV 409
Query 428 LAVSYDYRCIFLV--RGGP---NYFSIALIVITFIVVP 460
L +++ F V + G N F+I+ +VI ++V+P
Sbjct 410 LLYKFNWSGQFTVVSKTGATSLNIFAISAMVIGYVVLP 447
>gi|392428847|ref|YP_006469858.1| arginine permease [Streptococcus intermedius JTH08]
gi|355366578|gb|EHG14296.1| hypothetical protein HMPREF9177_00350 [Streptococcus intermedius
F0413]
gi|391757993|dbj|BAM23610.1| arginine permease homolog [Streptococcus intermedius JTH08]
Length=459
Score = 301 bits (771), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 185/458 (41%), Positives = 275/458 (61%), Gaps = 22/458 (4%)
Query 12 HKLGFCSVVMLGINSIIGAGIFLTPGEVIGLAGPFAPMAYVLAGIFAGVVAIVFATAARY 71
KLGF S+V+L INSIIG GIFL+PG V+ AG A Y++A +FA V+A+ FA+AA+Y
Sbjct 5 KKLGFYSIVLLTINSIIGTGIFLSPGSVVATAGDKALSIYLMAAVFASVLAVTFASAAKY 64
Query 72 VRTNGASYAYTTAAFGRRIGIYVGVTHAITASIAWGVLASFFVSTLLRVAFPDKAWADAE 131
V GASYAY AAFG IG YVG+T I ASIAWGVL + V T+L + D+
Sbjct 65 VAQGGASYAYAKAAFGENIGFYVGITRFIAASIAWGVLGTAVVKTVLNIF-----RLDSS 119
Query 132 QLFSVKTLTFLGFIGVLLAINLFGNRAIKWANGTSTVGKAFALSAFIVGGLWIITTQHVN 191
L + T+ F+ +G+L+ INL G + + N ST+GK AL I+ G+ II VN
Sbjct 120 NLVLI-TIGFVFLMGILMGINLLGTQIFELINNLSTIGKVGALLTTILVGVGIILLTGVN 178
Query 192 NYATAWSAYSATPYSLLGVAEIGKGTFSSMALATIVALYAFTGFESIANAAEEMDAPDRN 251
+ T + A L ++ S A I A YAFTGFES+A+ A++M+AP++N
Sbjct 179 EFNTIKNLTDAAGTKLGANLDL-----SGYVTAVIAAFYAFTGFESVASGAQDMEAPEKN 233
Query 252 LPRAIPIAIFSVGAIYLLTLTVAMLLGSNKIAASDDTVKLAAAIGNATFRTIIVVGALIS 311
LP+AIP+AI + IY+ + +AM++ I A+ + V LAA N RTII+VGALIS
Sbjct 234 LPKAIPLAIGIIAVIYIGIVGIAMMINPAAIVATKEVVALAAVFTNPIIRTIILVGALIS 293
Query 312 MFGINVAASFGAPRLWTALADSGVLPTRLSRKNQYDVPMVSFAITASLALAFPLALRFDN 371
MFGINVAASF PR+ A+A G +P ++ + P +F +T +A+ P+A R++
Sbjct 294 MFGINVAASFHTPRILEAMALQGQVPEWFKKRTENGFPTRAFFVTIGIAILLPMAFRYNM 353
Query 372 LHLTGLAVIARFVQFIIVPIALIAL----ARSQAVEHAAVRRNAFTDKVLPLVAIVVSVG 427
+ L+ I+RF+QF++VP+A+I + VE A +++ TD ++P + +++
Sbjct 354 TSIIVLSSISRFIQFLVVPVAVIIFYFGKQKESIVETA--KKSFTTDVIIPFLGAILTAV 411
Query 428 LAVSYDYRCIFLV--RGGP---NYFSIALIVITFIVVP 460
L +++ F V + G N F+I+ +VI ++V+P
Sbjct 412 LLYKFNWSGQFTVVSKTGATSLNIFAISAMVIGYVVLP 449
>gi|403515969|ref|YP_006656789.1| amino acid permease [Lactobacillus helveticus R0052]
gi|403081407|gb|AFR22985.1| amino acid permease [Lactobacillus helveticus R0052]
Length=463
Score = 299 bits (765), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 177/458 (39%), Positives = 282/458 (62%), Gaps = 22/458 (4%)
Query 12 HKLGFCSVVMLGINSIIGAGIFLTPGEVIGLAGPFAPMAYVLAGIFAGVVAIVFATAARY 71
KLGF S+V+L IN+IIG+GIFLTPG V+ AG A + Y A IFA ++AI FA A++Y
Sbjct 7 DKLGFWSIVLLAINAIIGSGIFLTPGNVVQQAGSKALVVYFSAAIFAAILAISFAAASKY 66
Query 72 VRTNGASYAYTTAAFGRRIGIYVGVTHAITASIAWGVLASFFVSTLLRV--AFPDKAWAD 129
V +GA+YAY+ AAFG +IG Y+GV +AS+AWGV+A + + + + P+KA
Sbjct 67 VTKSGAAYAYSKAAFGDKIGFYMGVLRYFSASVAWGVMAVGVIKSTISIFGGDPNKA--- 123
Query 130 AEQLFSVKTLTFLGFIGVLLAINLFGNRAIKWANGTSTVGKAFALSAFIVGGLWIITTQH 189
SV T+ FL + ++ INLFG R +KW +T+GK AL IV G+ ++ T
Sbjct 124 ----LSV-TVGFLVLMAIITIINLFGQRVLKWVMNLATIGKLAALILIIVAGVVLLITTG 178
Query 190 VNNYATAWSAYSATPYSLLGVAEIGKGTFSSMALATIVALYAFTGFESIANAAEEMDAPD 249
+N+ + + G + T ++ +A + A YAFTGFES+A+ +E+M P+
Sbjct 179 ASNHLSEVDQITQN-----GQKIVPTLTTTTFVMAIVSAFYAFTGFESVASGSEDMKDPE 233
Query 250 RNLPRAIPIAIFSVGAIYLLTLTVAMLLGSNKIAASDDTVKLAAAIGNATFRTIIVVGAL 309
+NLPRAIP+AI + +Y+ + VAM++ + + V +AA N R +I+VGAL
Sbjct 234 KNLPRAIPLAILIIAVVYIGVVAVAMVMNPKALMTTKQVVAVAAIFNNEILRDVILVGAL 293
Query 310 ISMFGINVAASFGAPRLWTALADSGVLPTRLSRKNQYDVPMVSFAITASLALAFPLALRF 369
+SMFGINVA+SF APR+ A+A G + L+++ + + P+ +F I+ +LA+ P+A +
Sbjct 294 VSMFGINVASSFNAPRILEAMAREGQMSKALTKRTKNNFPIRTFFISVALAVLIPMAFEY 353
Query 370 DNLHLTGLAVIARFVQFIIVPIALIALARSQAVEHA-AVRRNAFTDKVLPLVAIVVSVGL 428
+ ++L L+ + RF+ FI+VPIA+I R +A E +N TD V+P+++IV+ V L
Sbjct 354 NMVNLITLSAMVRFLGFIVVPIAVIQFYRGKAKEDVLNADKNVLTDVVVPILSIVIVVFL 413
Query 429 AVSYDYRCIFLVRG------GPNYFSIALIVITFIVVP 460
+ Y+++ F V G N+++IA+++ F+++P
Sbjct 414 LIEYNWKAQFGVANSAGQIVGVNWYAIAMMIFGFVLLP 451
>gi|169823908|ref|YP_001691519.1| putative amino acid transporter [Finegoldia magna ATCC 29328]
gi|167830713|dbj|BAG07629.1| putative amino acid transporter [Finegoldia magna ATCC 29328]
Length=456
Score = 298 bits (763), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 176/463 (39%), Positives = 280/463 (61%), Gaps = 21/463 (4%)
Query 10 AIHKLGFCSVVMLGINSIIGAGIFLTPGEVIGLAGPFAPMAYVLAGIFAGVVAIVFATAA 69
A KLGF S+V+L INSIIG+GIFL+PG V+ ++G +AP Y+ A FA V+AI FA++A
Sbjct 4 ATKKLGFWSIVLLTINSIIGSGIFLSPGSVVKMSGKYAPFIYLAAAAFAAVLAITFASSA 63
Query 70 RYVRTNGASYAYTTAAFGRRIGIYVGVTHAITASIAWGVLASFFVSTLLRVAFPDKAWAD 129
+YV GASYAYT AAFG G+Y+G+T +A+IAWGV+A+ V T+L + AD
Sbjct 64 KYVSKGGASYAYTKAAFGDNWGLYIGITRFFSAAIAWGVMATGVVKTMLNIF-----GAD 118
Query 130 AEQLFSVKTLTFLGFIGVLLAINLFGNRAIKWANGTSTVGKAFALSAFIVGGLWIITTQH 189
+ F+ T F+ + +L IN+ G R ++ + ST+GK AL IV GL ++ T
Sbjct 119 STN-FNYITAGFIILMTILFIINVCGTRILELVSNISTIGKLLALVTAIVAGLILVITTG 177
Query 190 VNNYATAWSAYSATPYSLLGVAEIGKGTFSSMALATIVALYAFTGFESIANAAEEMDAPD 249
NN++ + + ++ ++G ++ +A I A YAFTGFES+A+ +E+M+ P+
Sbjct 178 QNNFSQIETVTADVANNM----DLG-----TIVMAVIAAFYAFTGFESVASGSEDMEQPE 228
Query 250 RNLPRAIPIAIFSVGAIYLLTLTVAMLLGSNKIAASDDTVKLAAAIGNATFRTIIVVGAL 309
+NLP+AIP+ I + IY + V+M++ + + + V L A N R+II+ G+L
Sbjct 229 KNLPKAIPLGIVIIAVIYFGIVLVSMMIDPVAMVNTKEVVALVAIFKNHIVRSIILYGSL 288
Query 310 ISMFGINVAASFGAPRLWTALADSGVLPTRLSRKNQYDVPMVSFAITASLALAFPLALRF 369
ISMFGINVAASF PR+ ++A+ +P +++ P+ S ITA LA+ P+A ++
Sbjct 289 ISMFGINVAASFHTPRIIESMANENQVPKIFAKRTDKGFPLFSMVITAVLAIILPIAFKY 348
Query 370 DNLHLTGLAVIARFVQFIIVPIALIALARSQAVEH--AAVRRNAFTDKVLPLVAIVVSVG 427
+ ++ IARF QFI+VP+ALI + + + V++N FTD ++P+VA+++++
Sbjct 349 HMGSIMIISAIARFAQFIVVPLALIWFYYGKNKQEVVSGVKKNFFTDVIIPVVALLLTIV 408
Query 428 LAVSYDYRCIFLVRGG----PNYFSIALIVITFIVVPAMAYLH 466
L + + F V PNY +I + I +++VP Y +
Sbjct 409 LLAKFSWVKQFTVDNNGVLAPNYLAIVSMFIGYVLVPLFVYFY 451
>gi|58338146|ref|YP_194731.1| amino acid permease [Lactobacillus acidophilus NCFM]
gi|227902673|ref|ZP_04020478.1| APC family amino acid-polyamine-organocation transporter [Lactobacillus
acidophilus ATCC 4796]
gi|58255463|gb|AAV43700.1| amino acid permease [Lactobacillus acidophilus NCFM]
gi|227869579|gb|EEJ77000.1| APC family amino acid-polyamine-organocation transporter [Lactobacillus
acidophilus ATCC 4796]
Length=463
Score = 297 bits (760), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 176/459 (39%), Positives = 284/459 (62%), Gaps = 24/459 (5%)
Query 12 HKLGFCSVVMLGINSIIGAGIFLTPGEVIGLAGPFAPMAYVLAGIFAGVVAIVFATAARY 71
KLGF S+V+L IN+IIG+GIFLTPG V+ AG A + Y +A IFA ++AI FA A++Y
Sbjct 7 DKLGFWSIVLLAINAIIGSGIFLTPGSVVQQAGSKALIVYFIAAIFAAILAISFAAASKY 66
Query 72 VRTNGASYAYTTAAFGRRIGIYVGVTHAITASIAWGVLASFFVSTLLRV--AFPDKAWAD 129
V +GA+YAY+ AAFG+++G Y+GV +AS+AWGV+A + + + + P+KA
Sbjct 67 VTKSGAAYAYSKAAFGKKVGFYMGVLRYFSASVAWGVMAVGVIKSTISIFGGDPNKA--- 123
Query 130 AEQLFSVKTLTFLGFIGVLLAINLFGNRAIKWANGTSTVGKAFALSAFIVGG-LWIITTQ 188
+V T+ FL + ++ INLFG R +KW +T+GK AL I+ G + +ITT
Sbjct 124 ----LNV-TVGFLILMAIITIINLFGQRVLKWVMNLATIGKLAALVLIIIAGVILLITTG 178
Query 189 HVNNYATAWSAYSATPYSLLGVAEIGKGTFSSMALATIVALYAFTGFESIANAAEEMDAP 248
+N A + G + T ++ +A + A YAFTGFES+A+ +++M P
Sbjct 179 ASSNLA------EVDQITQNGQKIVPTLTTTTFVMAIVSAFYAFTGFESVASGSDDMKNP 232
Query 249 DRNLPRAIPIAIFSVGAIYLLTLTVAMLLGSNKIAASDDTVKLAAAIGNATFRTIIVVGA 308
++NLPRAIP+AI + +Y+ + VAM+L + + V +AA N R II+VGA
Sbjct 233 EKNLPRAIPLAILIIAVVYIGVVAVAMVLNPKALMTTKQVVAIAAIFNNEILRDIILVGA 292
Query 309 LISMFGINVAASFGAPRLWTALADSGVLPTRLSRKNQYDVPMVSFAITASLALAFPLALR 368
L+SMFGINVA+SF APR+ A+A G + L+++ + + P+ +F I+ LA+ P+A
Sbjct 293 LVSMFGINVASSFNAPRILEAMAREGQMSKALTKRTKNNFPIRTFFISVGLAILIPMAFE 352
Query 369 FDNLHLTGLAVIARFVQFIIVPIALIALARSQAVEHA-AVRRNAFTDKVLPLVAIVVSVG 427
++ ++L L+ + RF+ FI+VPIA+I R + E +NA+TD V+P+++I++ V
Sbjct 353 YNMVNLITLSAMVRFLGFIVVPIAVIQFYRGKTKEEVLKADKNAWTDVVVPILSIIIVVF 412
Query 428 LAVSYDYRCIFLVRG------GPNYFSIALIVITFIVVP 460
L + Y+++ F + G N+++IA+++ F+++P
Sbjct 413 LLIEYNWQAQFGITNAAGQVVGVNWYAIAMMIFGFVLLP 451
>gi|161508170|ref|YP_001578141.1| amino acid permease [Lactobacillus helveticus DPC 4571]
gi|160349159|gb|ABX27833.1| amino acid permease [Lactobacillus helveticus DPC 4571]
Length=463
Score = 296 bits (758), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 175/458 (39%), Positives = 282/458 (62%), Gaps = 22/458 (4%)
Query 12 HKLGFCSVVMLGINSIIGAGIFLTPGEVIGLAGPFAPMAYVLAGIFAGVVAIVFATAARY 71
KLGF S+V+L IN+IIG+GIFLTPG V+ AG A + Y +A IFA ++AI FA A++Y
Sbjct 7 DKLGFWSIVLLAINAIIGSGIFLTPGSVVQQAGSKALVVYFIAAIFAAILAISFAAASKY 66
Query 72 VRTNGASYAYTTAAFGRRIGIYVGVTHAITASIAWGVLASFFVSTLLRV--AFPDKAWAD 129
V +GA+YAY+ AAFG +IG Y+GV +AS+AWGV+A + + + + P+KA
Sbjct 67 VTKSGAAYAYSKAAFGDKIGFYMGVLRYFSASVAWGVMAVGVIKSTISIFGGDPNKA--- 123
Query 130 AEQLFSVKTLTFLGFIGVLLAINLFGNRAIKWANGTSTVGKAFALSAFIVGGLWIITTQH 189
SV T+ FL + ++ INLFG R +KW +T+GK AL IV G+ ++ T
Sbjct 124 ----LSV-TVGFLVLMAIITIINLFGQRVLKWVMNLATIGKLAALILIIVAGVVLLITTG 178
Query 190 VNNYATAWSAYSATPYSLLGVAEIGKGTFSSMALATIVALYAFTGFESIANAAEEMDAPD 249
+++ + + G + T ++ +A + A YAFTGFES+A+ +E+M P+
Sbjct 179 ASSHLSEVDQITQN-----GQKIVPTLTTTTFVMAIVSAFYAFTGFESVASGSEDMKDPE 233
Query 250 RNLPRAIPIAIFSVGAIYLLTLTVAMLLGSNKIAASDDTVKLAAAIGNATFRTIIVVGAL 309
+NLPRAIP+AI + +Y+ + V M++ + + V +AA N R +I+VGAL
Sbjct 234 KNLPRAIPLAILIIAVVYIGIVAVTMVMNPKALMTTKQVVAVAAIFNNEILRDVILVGAL 293
Query 310 ISMFGINVAASFGAPRLWTALADSGVLPTRLSRKNQYDVPMVSFAITASLALAFPLALRF 369
+SMFGINVA+SF APR+ A+A G + L+++ + + P+ +F I+ +L++ P+A +
Sbjct 294 VSMFGINVASSFNAPRILEAMAREGQMSKALTKRTKNNFPIRTFFISVALSVLIPMAFEY 353
Query 370 DNLHLTGLAVIARFVQFIIVPIALIALARSQAVEHA-AVRRNAFTDKVLPLVAIVVSVGL 428
+ ++L L+ + RF+ FI+VPIA+I R +A E +N TD V+P+++IV+ V L
Sbjct 354 NMVNLITLSAMVRFLGFIVVPIAVIQFYRGKAKEDVLNADKNVLTDVVVPILSIVIVVFL 413
Query 429 AVSYDYRCIFLVRGGP------NYFSIALIVITFIVVP 460
+ Y+++ F V G N+++IA++V F+++P
Sbjct 414 LIEYNWKAQFGVANGAGQIVGVNWYAIAMMVFGFVLLP 451
>gi|227893927|ref|ZP_04011732.1| APC family amino acid-polyamine-organocation transporter [Lactobacillus
ultunensis DSM 16047]
gi|227864231|gb|EEJ71652.1| APC family amino acid-polyamine-organocation transporter [Lactobacillus
ultunensis DSM 16047]
Length=472
Score = 295 bits (756), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 176/464 (38%), Positives = 286/464 (62%), Gaps = 34/464 (7%)
Query 12 HKLGFCSVVMLGINSIIGAGIFLTPGEVIGLAGPFAPMAYVLAGIFAGVVAIVFATAARY 71
KLGF S+V+L IN+IIG+GIFLTPG V+ AG A + Y +A IFA ++AI FA A++Y
Sbjct 15 DKLGFWSIVLLAINAIIGSGIFLTPGSVVQQAGSKALIVYFIAAIFAAILAISFAAASKY 74
Query 72 VRTNGASYAYTTAAFGRRIGIYVGVTHAITASIAWGVLASFFVSTLLRVAFPDKAWADAE 131
V +GA+YAY+ AAFG+++G Y+GV +AS+AWGV+A + +++ + D
Sbjct 75 VTKSGAAYAYSKAAFGKKVGFYMGVLRYFSASVAWGVMAVGVIKSMISIF-----GGDPN 129
Query 132 QLFSVKTLTFLGFIGVLLAINLFGNRAIKWANGTSTVGKAFALSAFIVGGLWIITTQHVN 191
+ +V T+ FL + ++ INLFG R +KW +T+GK AL IV G+ ++
Sbjct 130 KTLNV-TVGFLVLMAIITIINLFGQRVLKWVMNLATIGKLAALVLIIVAGVVLLI----- 183
Query 192 NYATAWSAYSATPYSLLGVAEIGKG--------TFSSMALATIVALYAFTGFESIANAAE 243
AT S+ +L V +I +G T ++ +A + A YAFTGFES+A+ +E
Sbjct 184 --ATGASS------NLSEVDQITQGGQKIVPTLTTTTFVMAIVSAFYAFTGFESVASGSE 235
Query 244 EMDAPDRNLPRAIPIAIFSVGAIYLLTLTVAMLLGSNKIAASDDTVKLAAAIGNATFRTI 303
+M P++NLPRAIP+AI + +Y+ + VAM+L + + V +AA N R +
Sbjct 236 DMKDPEKNLPRAIPLAILVIAIVYIGVVAVAMVLNPKALMTTKQVVAIAAIFDNKILRDV 295
Query 304 IVVGALISMFGINVAASFGAPRLWTALADSGVLPTRLSRKNQYDVPMVSFAITASLALAF 363
I+VGAL+SMFGINVA+SF APR+ A+A G + L+++ + + P+ +F I+ +LA+
Sbjct 296 ILVGALVSMFGINVASSFNAPRILEAMAREGQMSKALTKRTKNNFPIRTFFISVALAILI 355
Query 364 PLALRFDNLHLTGLAVIARFVQFIIVPIALIALARSQAVEHA-AVRRNAFTDKVLPLVAI 422
P+A ++ ++L L+ + RF+ FI+VP+A+I R +A E+ +N TD V+P+++I
Sbjct 356 PMAFEYNMVNLITLSAMVRFLGFIVVPLAVIQFYRDKAKENVLKADKNVVTDVVVPILSI 415
Query 423 VVSVGLAVSYDYRCIFLVRG------GPNYFSIALIVITFIVVP 460
V+ V L + Y+++ F V G N+++I +++ F+++P
Sbjct 416 VIVVFLLIEYNWQAQFGVANAAGKIVGVNWYAIVMMIFGFVILP 459
>gi|148543318|ref|YP_001270688.1| amino acid permease-associated protein [Lactobacillus reuteri
DSM 20016]
gi|184152727|ref|YP_001841068.1| amino acid transport protein [Lactobacillus reuteri JCM 1112]
gi|227364386|ref|ZP_03848478.1| APC family amino acid-polyamine-organocation transporter [Lactobacillus
reuteri MM2-3]
gi|325683585|ref|ZP_08163101.1| APC family amino acid transporter [Lactobacillus reuteri MM4-1A]
gi|148530352|gb|ABQ82351.1| amino acid/polyamine/organocation transporter, APC superfamily
[Lactobacillus reuteri DSM 20016]
gi|183224071|dbj|BAG24588.1| amino acid transport protein [Lactobacillus reuteri JCM 1112]
gi|227070572|gb|EEI08903.1| APC family amino acid-polyamine-organocation transporter [Lactobacillus
reuteri MM2-3]
gi|324977935|gb|EGC14886.1| APC family amino acid transporter [Lactobacillus reuteri MM4-1A]
Length=464
Score = 295 bits (755), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 177/457 (39%), Positives = 274/457 (60%), Gaps = 17/457 (3%)
Query 13 KLGFCSVVMLGINSIIGAGIFLTPGEVIGLAGPFAPMAYVLAGIFAGVVAIVFATAARYV 72
KLGF S+V+L INSIIG+GIFLTPG V+ + G AP+AY A IFA ++AI FA AA+YV
Sbjct 5 KLGFWSIVLLAINSIIGSGIFLTPGSVVSMVGTKAPLAYFFAAIFASILAITFAAAAKYV 64
Query 73 RTNGASYAYTTAAFGRRIGIYVGVTHAITASIAWGVLASFFVSTLLRVAFPDKAWADAEQ 132
+GA+Y+Y AA+G +G Y+GV +AS+AWGV+A ++R F W Q
Sbjct 65 NKSGAAYSYAKAAYGENMGFYMGVVRFFSASVAWGVMAV----GVIRTTFSIFGW---NQ 117
Query 133 LFSVKTLTFLGFIGVLLAINLFGNRAIKWANGTSTVGKAFALSAFIVGGLWIITTQHVNN 192
F TL F+ + +++ IN+ G R N STVGK AL+ I+ G+ I+ N+
Sbjct 118 SFGNITLGFVVLMLIIMVINMMGRRIFTIINDLSTVGKLGALALIIIAGVIILLKTGENH 177
Query 193 YATAWSAYSATPYSLLGVAEIGKGTFSSMALATIVALYAFTGFESIANAAEEMDAPDRNL 252
+ +T SL I T S +A I A YAFTGFE++A +E+M P++NL
Sbjct 178 FNELNHLTDSTGKSL-----IPAFTTSGFVMAVISAFYAFTGFEAVATGSEDMKDPEKNL 232
Query 253 PRAIPIAIFSVGAIYLLTLTVAMLLGSNKIAASDDTVKLAAAIGNATFRTIIVVGALISM 312
PRAIP+AI + +Y+ T+ VAM++ + + V L A N + +I+VGA+ISM
Sbjct 233 PRAIPLAILVIAIVYICTIAVAMMVNPAAMVTTKQVVALVAIFHNKVLQDVILVGAIISM 292
Query 313 FGINVAASFGAPRLWTALADSGVLPTRLSRKNQYDVPMVSFAITASLALAFPLALRFDNL 372
FGINVA+SF PR+ A+A+ +P ++R+ + + P+VSF IT LA+ P+A +++
Sbjct 293 FGINVASSFHTPRVLEAMANENQVPQFIARRTKRNFPLVSFIITLVLAVGIPMAFQYNLP 352
Query 373 HLTGLAVIARFVQFIIVPIALIALARSQAVEH-AAVRRNAFTDKVLPLVAIVVSVGLAVS 431
+ ++ RF +FI++P+ +I R E +N FTD +LP++++V+++ L +
Sbjct 353 TIIVISATVRFFEFIVIPLGVIRFYRGTNREKILPAHKNFFTDVILPILSVVITLFLLMR 412
Query 432 YDYRCIFLV-RGG---PNYFSIALIVITFIVVPAMAY 464
YD+ F + R G PN+F+I +V F+++P + +
Sbjct 413 YDWISEFSINRAGHLMPNWFAIFGMVFGFVILPLILF 449
>gi|309813124|ref|ZP_07706848.1| amino acid permease [Dermacoccus sp. Ellin185]
gi|308432928|gb|EFP56836.1| amino acid permease [Dermacoccus sp. Ellin185]
Length=523
Score = 291 bits (746), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 192/465 (42%), Positives = 284/465 (62%), Gaps = 16/465 (3%)
Query 7 RGYAIHKLGFCSVVMLGINSIIGAGIFLTPGEVIGLAGPFAPMAYVLAGIFAGVVAIVFA 66
R + K G S+V+L IN IIG+GIFL+PG V+ +AG + P+ YV+AG+FA V+A+ FA
Sbjct 55 RKTSRAKFGLASIVLLTINGIIGSGIFLSPGAVMKVAGTWTPLVYVIAGVFAAVLAVTFA 114
Query 67 TAARYVRTNGASYAYTTAAFGRRIGIYVGVTHAITASIAWGVLASFFVSTLLRVAFPDKA 126
AAR+ NGA++AYT AFG +G YVG+T + A+IAWGV+A+ V+T+L
Sbjct 115 AAARWTSENGAAFAYTRVAFGDDVGFYVGLTRFVGAAIAWGVMATAVVTTVL------TV 168
Query 127 WADAEQLFSVK-TLTFLGFIGVLLAINLFGNRAIKWANGTSTVGKAFALSAFIVGGLWII 185
+ E + + T+ F+ + VLLAINL G R K N ST+GK AL IV GL ++
Sbjct 169 FGGHEAVTTTNITIGFVLLMVVLLAINLAGTRITKVVNNISTIGKVAALVLTIVAGLVVL 228
Query 186 TTQHVNNYATAWSAYSATPYSLLGVAEIGKGTFSSMALATIVALYAFTGFESIANAAEEM 245
N+++ A+ P V + F LA A YAFTGFE +AA EM
Sbjct 229 AMTGDNHFSDL--AHLKGPDGSPLVPSMDTTAFVGAMLA---AFYAFTGFEGAGSAASEM 283
Query 246 DAPDRNLPRAIPIAIFSVGAIYLLTLTVAMLLGSNKIAASDDTVKLAAAIGNATFRTIIV 305
+ P RNLPRAIPI + V +Y+ ++VAM++ + S D V LA+A N+ R +IV
Sbjct 284 EDPARNLPRAIPIGVAVVIVVYVAVVSVAMMINPTGVLESKDAVVLASAFDNSIVRDLIV 343
Query 306 VGALISMFGINVAASFGAPRLWTALADSGVLPTRLSRKNQYDVPMVSFAITASLALAFPL 365
+GAL+SMFGINVAASF PR++ A++ +LP SR +Q VP+V+F +TA LA+ P+
Sbjct 344 LGALVSMFGINVAASFNTPRIFDAMSRRRMLPAAASRTSQRGVPVVAFVVTAVLAIVVPM 403
Query 366 ALRFDNLHLTGLAVIARFVQFIIVPIALIA--LARSQAVEHAAVRRNAFTDKVLPLVAIV 423
A + + ++ + RFVQF++VP+ALI L R++ + V+R+ D V P+++I
Sbjct 404 AFGYSMRGIMVISSVTRFVQFVMVPLALILCFLGRTRHRPN-DVKRSVLLDVVFPILSIA 462
Query 424 VSVGLAVSYDYRCIFLVRGGP-NYFSIALIVITFIVVPAMAYLHY 467
SV L V +D+R F GG N +++A +++ ++V+PA YL +
Sbjct 463 ASVLLMVEFDWRGQFSNPGGGLNLWAVAAMIVGYVVLPAALYLPW 507
>gi|295693807|ref|YP_003602417.1| amino acid permease [Lactobacillus crispatus ST1]
gi|295031913|emb|CBL51392.1| Amino acid permease [Lactobacillus crispatus ST1]
Length=465
Score = 291 bits (744), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 174/461 (38%), Positives = 284/461 (62%), Gaps = 26/461 (5%)
Query 12 HKLGFCSVVMLGINSIIGAGIFLTPGEVIGLAGPFAPMAYVLAGIFAGVVAIVFATAARY 71
KLGF S+V+L IN+IIG+GIFLTPG V+ AG A + Y++A IFA ++AI FA A++Y
Sbjct 7 DKLGFWSIVLLAINAIIGSGIFLTPGSVVQQAGSKALVVYLIAAIFAAILAISFAAASKY 66
Query 72 VRTNGASYAYTTAAFGRRIGIYVGVTHAITASIAWGVLASFFVSTLLRV--AFPDKAWAD 129
V +GA+YAY+ AAFG++IG Y+GV +AS+AWGV+A + + + + P+KA
Sbjct 67 VTKSGAAYAYSKAAFGKKIGFYMGVLRYFSASVAWGVMAVGVIKSTISIFGGNPNKA--- 123
Query 130 AEQLFSVKTLTFLGFIGVLLAINLFGNRAIKWANGTSTVGKAFALSAFIVGGL-WIITTQ 188
+V T+ FL + ++ INLFG + +K+ +T+GK AL I+ G+ +ITT
Sbjct 124 ----INV-TIGFLILMAIITVINLFGQKVVKYVMNLATIGKLAALVLIIIAGVVLLITTG 178
Query 189 HVNNYATAWSAYSATPYSLLGVAEIGKGTFSSMALATIVALYAFTGFESIANAAEEMDAP 248
+N + G + T ++ +A + A YAFTGFES+A+ +E+M P
Sbjct 179 ASSNLG------QVDQLTQNGQKIVPTLTTTTFVMAIVSAFYAFTGFESVASGSEDMKNP 232
Query 249 DRNLPRAIPIAIFSVGAIYLLTLTVAMLLGSNKIAASDDTVKLAAAIGNATFRTIIVVGA 308
++NLPRAIP+AI + +Y+ + VAM+L + + V +AA N R +I+VGA
Sbjct 233 EKNLPRAIPLAILIIAVVYIGVVAVAMVLNPRALMTTKQVVAIAAIFNNEILRDVILVGA 292
Query 309 LISMFGINVAASFGAPRLWTALADSGVLPTRLSRKNQYDVPMVSFAITASLALAFPLALR 368
L+SMFGINVA+SF APR+ A+A G + L+++ + + P+ +F I+ LA+ P+A
Sbjct 293 LVSMFGINVASSFNAPRILEAMAREGQMSQALTKRTKNNFPIRTFFISVGLAILIPMAFE 352
Query 369 FDNLHLTGLAVIARFVQFIIVPIALIALARSQAVEHAAV---RRNAFTDKVLPLVAIVVS 425
++ ++L L+ + RF+ FI+VPIA+I R + E + +N +TD V+P+++I++
Sbjct 353 YNMVNLITLSAMVRFLGFIVVPIAVIQFYRGKGTEKQDILNADKNVWTDVVVPILSIILV 412
Query 426 VGLAVSYDYRCIFLVRG------GPNYFSIALIVITFIVVP 460
+ L V Y+++ F V G N+++IA+++ F+++P
Sbjct 413 IFLLVEYNWKAQFGVANNAGQVIGVNWYAIAMMIFGFVLLP 453
>gi|295425933|ref|ZP_06818610.1| amino acid permease [Lactobacillus amylolyticus DSM 11664]
gi|295064363|gb|EFG55294.1| amino acid permease [Lactobacillus amylolyticus DSM 11664]
Length=466
Score = 290 bits (743), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 170/460 (37%), Positives = 281/460 (62%), Gaps = 20/460 (4%)
Query 12 HKLGFCSVVMLGINSIIGAGIFLTPGEVIGLAGPFAPMAYVLAGIFAGVVAIVFATAARY 71
KLGF S+V L IN+IIG+GIFLTPG V+ AG A +AY +A IFA ++A+ FA AA+Y
Sbjct 7 DKLGFWSIVFLAINAIIGSGIFLTPGSVVQQAGSKALIAYFIAAIFAAILAVTFAAAAKY 66
Query 72 VRTNGASYAYTTAAFGRRIGIYVGVTHAITASIAWGVLASFFVSTLLRVAFPDKAWADAE 131
V +GA+YAY+ AAFG +IG Y+GV +AS+AWGV+A V + + + +
Sbjct 67 VTKSGAAYAYSKAAFGDKIGFYMGVLRYFSASVAWGVMAVGVVRSTISI------FGGNS 120
Query 132 QLFSVKTLTFLGFIGVLLAINLFGNRAIKWANGTSTVGKAFALSAFIVGGLWIITTQHVN 191
+ F T+ F+ + ++ INLFG R +KW +T+GK AL IV G+ ++ + +
Sbjct 121 EDFGTVTIGFIVLMALITIINLFGQRVVKWVMNLATIGKLAALILIIVAGVVLLISTGAS 180
Query 192 NYATAWSAYSATPYSLLGVAEIGKGTFSSMALATIVALYAFTGFESIANAAEEMDAPDRN 251
++ + G + T +S +A + A YAFTGFES+A+ +E+M P++N
Sbjct 181 SHLNEVDQITQN-----GQKIVPTLTTTSFVMAIVSAFYAFTGFESVASGSEDMKDPEKN 235
Query 252 LPRAIPIAIFSVGAIYLLTLTVAMLLGSNKIAASDDTVKLAAAIGNATFRTIIVVGALIS 311
LPRAIP+AI + +Y+ + VAM+L + + V +AA N R +I+VGAL+S
Sbjct 236 LPRAIPLAILVIALVYIGVVAVAMVLDPKALMTTKQVVAVAAIFKNEILRDVILVGALVS 295
Query 312 MFGINVAASFGAPRLWTALADSGVLPTRLSRKNQYDVPMVSFAITASLALAFPLALRFDN 371
MFGINV +SF APR+ A+A + L+++ + + P+ +F I+ LA+ P+A +++
Sbjct 296 MFGINVGSSFNAPRILEAMARENQMSKALTKRTKNNFPIRTFFISVVLAILIPMAFQYNM 355
Query 372 LHLTGLAVIARFVQFIIVPIALIALARSQAVEHAAV---RRNAFTDKVLPLVAIVVSVGL 428
++L L+ + RF+ FI+VP+A+I R + ++ + +N TD V+P+++I + V L
Sbjct 356 VNLITLSAMVRFLGFIVVPLAVIRFYRGKGIDKENILDADKNVLTDIVMPVLSIALVVFL 415
Query 429 AVSYDYRCIFLV---RG---GPNYFSIALIVITFIVVPAM 462
+ YD++ F++ +G G N+++IA+++ FI++P +
Sbjct 416 LIEYDWKTQFVIINTQGQFVGINWYAIAMMIFGFIILPLL 455
>gi|229826233|ref|ZP_04452302.1| hypothetical protein GCWU000182_01605 [Abiotrophia defectiva
ATCC 49176]
gi|229789103|gb|EEP25217.1| hypothetical protein GCWU000182_01605 [Abiotrophia defectiva
ATCC 49176]
Length=458
Score = 290 bits (741), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 186/461 (41%), Positives = 277/461 (61%), Gaps = 17/461 (3%)
Query 12 HKLGFCSVVMLGINSIIGAGIFLTPGEVIGLAGPFAPMAYVLAGIFAGVVAIVFATAARY 71
K+ F S+V L INSIIG GIFL+PG V AG AP Y+ A +FA V+A+ FA A++Y
Sbjct 3 KKMKFWSIVFLTINSIIGTGIFLSPGGVTKQAGSMAPFIYLCAAVFAAVLAVTFAAASKY 62
Query 72 VRTNGASYAYTTAAFGRRIGIYVGVTHAITASIAWGVLASFFVSTLLRVAFPDKAWADAE 131
V NGA+Y+Y AAFG G+++GVT ++ASIAWGV+A+ V L + D++
Sbjct 63 VVKNGAAYSYAKAAFGANTGMFIGVTRYVSASIAWGVMATGVVKNALSIL-----GMDSK 117
Query 132 QLFSVKTLTFLGFIGVLLAINLFGNRAIKWANGTSTVGKAFALSAFIVGGLWIITTQHVN 191
L +V T+ FL + +L IN+ G + + ST GK AL+ IV G+ II N
Sbjct 118 NLVNV-TIGFLVLMLILFIINVKGTAFLTLISDLSTAGKVAALAITIVAGIVIIIMTGEN 176
Query 192 NYATAWSAYSATPYSLLGVAEIGKGTFSSMALATIVALYAFTGFESIANAAEEMDAPDRN 251
+ +A SL+ + + A I A YAFTGFES+A+ A +M+ P++N
Sbjct 177 HITDVDMLKNAEGGSLIPTMDA-----TMFVTAVISAFYAFTGFESVASGASDMENPEKN 231
Query 252 LPRAIPIAIFSVGAIYLLTLTVAMLLGSNKIAASDDTVKLAAAIGNATFRTIIVVGALIS 311
LPRAIP+AI + IY + VAM++ + SD+ V LAA GN R II++GALIS
Sbjct 232 LPRAIPLAIGIIAVIYFGIVLVAMMINPVALVQSDEVVILAAVFGNKIIRGIIIIGALIS 291
Query 312 MFGINVAASFGAPRLWTALADSGVLPTRLSRKNQYDVPMVSFAITASLALAFPLALRFDN 371
MFGINVA+SF APR+ A+A G+LP L ++N D+PM +F +TA+LA+ P++ +D
Sbjct 292 MFGINVASSFHAPRVCEAMAKDGILPAFLGKRNSKDIPMNAFILTAALAIVVPMSFMYDM 351
Query 372 LHLTGLAVIARFVQFIIVPIALIA-LARSQAVEHAAVRRNAFTDKVLPLVAIVVSVGLAV 430
+ ++ IARF QFIIVP+ +I Q E ++N TD VLP++++ ++V L
Sbjct 352 QGIMIISSIARFAQFIIVPLGVIVFFMGKQKEEIIDAKKNVITDVVLPIISVALTVLLLY 411
Query 431 SYDYRCIFLVRGGP-----NYFSIALIVITFIVVPAMAYLH 466
++++ F V G N+++I ++I ++++P +AY H
Sbjct 412 KFNWKGQFSVTGEDGVAHLNWYAITAMIIGYVILPIVAYFH 452
>gi|238853517|ref|ZP_04643893.1| amino acid transporter [Lactobacillus gasseri 202-4]
gi|238833875|gb|EEQ26136.1| amino acid transporter [Lactobacillus gasseri 202-4]
Length=466
Score = 288 bits (738), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 176/479 (37%), Positives = 283/479 (60%), Gaps = 28/479 (5%)
Query 12 HKLGFCSVVMLGINSIIGAGIFLTPGEVIGLAGPFAPMAYVLAGIFAGVVAIVFATAARY 71
KLGF S+V+L INSIIG+GIFLTPG V+ AG A + Y +A IFA ++A+ FA AA+Y
Sbjct 7 SKLGFWSIVLLAINSIIGSGIFLTPGSVVQQAGSKALIVYFIAAIFASILAVSFAAAAKY 66
Query 72 VRTNGASYAYTTAAFGRRIGIYVGVTHAITASIAWGVLASFFVSTLLRV--AFPDKAWAD 129
V +GA+YAY+ AAFG +G Y+G+ +AS+AWGV+A + + + + P+K +
Sbjct 67 VTKSGAAYAYSKAAFGNNVGFYMGILRYFSASVAWGVMAVGVIKSTISIFGGNPNKTMS- 125
Query 130 AEQLFSVKTLTFLGFIGVLLAINLFGNRAIKWANGTSTVGKAFALSAFIVGGLWIITTQH 189
T+ FL + V+ INLFG + +K+ +T+GK AL IV G+ ++
Sbjct 126 -------VTIGFLILMAVITIINLFGQKVVKYVMNLATLGKLAALVLIIVAGVVLLIMTG 178
Query 190 VNNYATAWSAYSATPYSLLGVAEIGKGTFSSMALATIVALYAFTGFESIANAAEEMDAPD 249
++ + G + T + +A + A YAFTGFES+A+ +E+M P
Sbjct 179 ASSNLNEVDQITQN-----GQKIVPTLTTTGFVMAIVSAFYAFTGFESVASGSEDMKNPA 233
Query 250 RNLPRAIPIAIFSVGAIYLLTLTVAMLLGSNKIAASDDTVKLAAAIGNATFRTIIVVGAL 309
+NLPRAIP+AI + +Y+ + VAM+L + + V +AA N R +I+VGAL
Sbjct 234 KNLPRAIPLAIIVIAIVYIGVVAVAMVLDPKALMTTKQVVAIAAIFKNEILRDVILVGAL 293
Query 310 ISMFGINVAASFGAPRLWTALADSGVLPTRLSRKNQYDVPMVSFAITASLALAFPLALRF 369
ISMFGINVA+SF APR+ A+A L+++ + + P+ +F I+ LA+ P+A +
Sbjct 294 ISMFGINVASSFNAPRILEAMARENQFSKSLTKRTKNNFPIRTFFISVLLAILIPMAFEY 353
Query 370 DNLHLTGLAVIARFVQFIIVPIALIALARSQAVEHA-AVRRNAFTDKVLPLVAIVVSVGL 428
+ ++L L+ + RF+ FI+VP+A+I R + E ++N +TD V+P+++IV+ + L
Sbjct 354 NMVNLITLSAMVRFLGFIVVPLAVIQFYRGKTAESVLDAQKNIWTDIVVPILSIVLVIFL 413
Query 429 AVSYDYRCIFLVRG------GPNYFSIALIVITFIVVPAMAYLHYYRIIRRVGDRPSTR 481
V Y+++ F V G N+++IA+++ FIV+P + + II R DR +++
Sbjct 414 LVEYNWKAQFGVVNASGQVTGINWYAIAMMIFGFIVLPLIMF-----IISR-KDRKASK 466
>gi|300362846|ref|ZP_07059016.1| APC family amino acid-polyamine-organocation transporter [Lactobacillus
gasseri JV-V03]
gi|300352896|gb|EFJ68774.1| APC family amino acid-polyamine-organocation transporter [Lactobacillus
gasseri JV-V03]
Length=466
Score = 288 bits (738), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 180/481 (38%), Positives = 283/481 (59%), Gaps = 32/481 (6%)
Query 12 HKLGFCSVVMLGINSIIGAGIFLTPGEVIGLAGPFAPMAYVLAGIFAGVVAIVFATAARY 71
KLGF S+V+L INSIIG+GIFLTPG V+ AG A + Y +A IFA ++A+ FA AA+Y
Sbjct 7 SKLGFWSIVLLAINSIIGSGIFLTPGSVVQQAGSKALIVYFIAAIFASILAVSFAAAAKY 66
Query 72 VRTNGASYAYTTAAFGRRIGIYVGVTHAITASIAWGVLASFFVSTLLRV--AFPDKAWAD 129
V +GA+YAY+ AAFG +G Y+G+ +AS+AWGV+A + + + + P+K +
Sbjct 67 VTKSGAAYAYSKAAFGNNVGFYMGILRYFSASVAWGVMAVGVIKSTISIFGGNPNKTMS- 125
Query 130 AEQLFSVKTLTFLGFIGVLLAINLFGNRAIKWANGTSTVGKAFALSAFIVGG--LWIITT 187
T+ FL + V+ INLFG + +K+ +T+GK AL IV G L I+T
Sbjct 126 -------VTIGFLILMAVITIINLFGQKVVKYVMNLATLGKLAALVLIIVAGVVLLIVTG 178
Query 188 QHVNNYATAWSAYSATPYSLLGVAEIGKGTFSSMALATIVALYAFTGFESIANAAEEMDA 247
N + G + T + +A + A YAFTGFES+A+ +E+M
Sbjct 179 ASSN-------LNEVDQITQNGQKIVPTLTTTGFVMAIVSAFYAFTGFESVASGSEDMKN 231
Query 248 PDRNLPRAIPIAIFSVGAIYLLTLTVAMLLGSNKIAASDDTVKLAAAIGNATFRTIIVVG 307
P +NLPRAIP+AI + +Y+ + VAM+L + + V +AA N R +I+VG
Sbjct 232 PAKNLPRAIPLAIIVIAIVYIGVVAVAMVLDPKALMTTKQVVAIAAIFKNEILRDVILVG 291
Query 308 ALISMFGINVAASFGAPRLWTALADSGVLPTRLSRKNQYDVPMVSFAITASLALAFPLAL 367
ALISMFGINVA+SF APR+ A+A L+++ + + P+ +F I+ LA+ P+A
Sbjct 292 ALISMFGINVASSFNAPRILEAMARENQFSKSLTKRTKNNFPIRTFFISVLLAILIPMAF 351
Query 368 RFDNLHLTGLAVIARFVQFIIVPIALIALARSQAVEHA-AVRRNAFTDKVLPLVAIVVSV 426
++ ++L L+ + RF+ FI+VP+A+I R + E ++N +TD V+P+++IV+ +
Sbjct 352 EYNMVNLITLSAMVRFLGFIVVPLAVIQFYRGKTAEPVLDAQKNIWTDIVVPILSIVLVI 411
Query 427 GLAVSYDYRCIFLVRG------GPNYFSIALIVITFIVVPAMAYLHYYRIIRRVGDRPST 480
L V Y+++ F V G N+++IA+++ FIV+P + + II R DR ++
Sbjct 412 FLLVEYNWKAQFGVVNASGQVTGINWYAIAMMIFGFIVLPLIMF-----IISR-KDRKAS 465
Query 481 R 481
+
Sbjct 466 K 466
>gi|116630341|ref|YP_815611.1| amino acid transporter [Lactobacillus gasseri ATCC 33323]
gi|116095923|gb|ABJ61075.1| amino acid/polyamine/organocation transporter, APC superfamily
[Lactobacillus gasseri ATCC 33323]
Length=466
Score = 288 bits (737), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 176/479 (37%), Positives = 283/479 (60%), Gaps = 28/479 (5%)
Query 12 HKLGFCSVVMLGINSIIGAGIFLTPGEVIGLAGPFAPMAYVLAGIFAGVVAIVFATAARY 71
KLGF S+V+L INSIIG+GIFLTPG V+ AG A + Y +A IFA ++AI FA AA+Y
Sbjct 7 SKLGFWSIVLLAINSIIGSGIFLTPGSVVQQAGSKALIVYFIAAIFASILAISFAAAAKY 66
Query 72 VRTNGASYAYTTAAFGRRIGIYVGVTHAITASIAWGVLASFFVSTLLRV--AFPDKAWAD 129
V +GA+YAY+ AAFG +G Y+G+ +AS+AWGV+A + + + + P+K +
Sbjct 67 VTKSGAAYAYSKAAFGNNVGFYMGILRYFSASVAWGVMAVGVIKSTISIFGGNPNKTMS- 125
Query 130 AEQLFSVKTLTFLGFIGVLLAINLFGNRAIKWANGTSTVGKAFALSAFIVGGLWIITTQH 189
T+ FL + V+ INLFG + +K+ +T+GK AL IV G+ ++
Sbjct 126 -------VTIGFLILMAVITIINLFGQKVVKYVMNLATIGKLAALVLIIVAGVVLLIMTG 178
Query 190 VNNYATAWSAYSATPYSLLGVAEIGKGTFSSMALATIVALYAFTGFESIANAAEEMDAPD 249
++ + G + T + +A + A YAFTGFES+A+ +++M P
Sbjct 179 ASSNLNEVDQITQN-----GQKIVPTLTTTGFVMAIVSAFYAFTGFESVASGSDDMKNPA 233
Query 250 RNLPRAIPIAIFSVGAIYLLTLTVAMLLGSNKIAASDDTVKLAAAIGNATFRTIIVVGAL 309
+NLPRAIP+AI + +Y+ + VAM+L + + V +AA N R +I+VGAL
Sbjct 234 KNLPRAIPLAIIVIAIVYIGVVAVAMMLDPKSLMTTKQVVAIAAIFKNEILRDVILVGAL 293
Query 310 ISMFGINVAASFGAPRLWTALADSGVLPTRLSRKNQYDVPMVSFAITASLALAFPLALRF 369
ISMFGINVA+SF APR+ A+A L+++ + + P+ +F I+ LA+ P+A +
Sbjct 294 ISMFGINVASSFNAPRILEAMARENQFSKSLTKRTKNNFPIRTFFISVLLAILIPMAFEY 353
Query 370 DNLHLTGLAVIARFVQFIIVPIALIALARSQAVEHA-AVRRNAFTDKVLPLVAIVVSVGL 428
+ ++L L+ + RF+ FI+VP+A+I R + E ++N +TD V+P+++IV+ + L
Sbjct 354 NMVNLITLSAMVRFLGFIVVPLAVIQFYRGKTAETVLNAQKNIWTDIVVPILSIVLVIFL 413
Query 429 AVSYDYRCIFLVRG------GPNYFSIALIVITFIVVPAMAYLHYYRIIRRVGDRPSTR 481
V Y+++ F V G N+++IA+++ FIV+P L + I R+ DR +++
Sbjct 414 LVEYNWKAQFGVVNASGQVTGINWYAIAMMIFGFIVLP----LIMFFISRK--DRKASK 466
>gi|282852303|ref|ZP_06261648.1| amino acid permease [Lactobacillus gasseri 224-1]
gi|282556582|gb|EFB62199.1| amino acid permease [Lactobacillus gasseri 224-1]
gi|398399792|gb|EJN53410.1| APC family amino acid-polyamine-organocation transporter [Lactobacillus
gasseri CECT 5714]
Length=466
Score = 288 bits (737), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 176/479 (37%), Positives = 283/479 (60%), Gaps = 28/479 (5%)
Query 12 HKLGFCSVVMLGINSIIGAGIFLTPGEVIGLAGPFAPMAYVLAGIFAGVVAIVFATAARY 71
KLGF S+V+L INSIIG+GIFLTPG V+ AG A + Y +A IFA ++AI FA AA+Y
Sbjct 7 SKLGFWSIVLLAINSIIGSGIFLTPGSVVQQAGSKALIVYFIAAIFASILAISFAAAAKY 66
Query 72 VRTNGASYAYTTAAFGRRIGIYVGVTHAITASIAWGVLASFFVSTLLRV--AFPDKAWAD 129
V +GA+YAY+ AAFG +G Y+G+ +AS+AWGV+A + + + + P+K +
Sbjct 67 VTKSGAAYAYSKAAFGNNVGFYMGILRYFSASVAWGVMAVGVIKSTISIFGGNPNKTMS- 125
Query 130 AEQLFSVKTLTFLGFIGVLLAINLFGNRAIKWANGTSTVGKAFALSAFIVGGLWIITTQH 189
T+ FL + V+ INLFG + +K+ +T+GK AL IV G+ ++
Sbjct 126 -------VTIGFLILMAVITIINLFGQKVVKYVMNLATIGKLAALVLIIVAGVVLLIMTG 178
Query 190 VNNYATAWSAYSATPYSLLGVAEIGKGTFSSMALATIVALYAFTGFESIANAAEEMDAPD 249
++ + G + T + +A + A YAFTGFES+A+ +++M P
Sbjct 179 ASSNLNEVDQITQN-----GQKIVPTLTTTGFVMAIVSAFYAFTGFESVASGSDDMKNPA 233
Query 250 RNLPRAIPIAIFSVGAIYLLTLTVAMLLGSNKIAASDDTVKLAAAIGNATFRTIIVVGAL 309
+NLPRAIP+AI + +Y+ + VAM+L + + V +AA N R +I+VGAL
Sbjct 234 KNLPRAIPLAIIVIAIVYIGVVAVAMMLDPKSLMTTKQVVAIAAIFKNEILRDVILVGAL 293
Query 310 ISMFGINVAASFGAPRLWTALADSGVLPTRLSRKNQYDVPMVSFAITASLALAFPLALRF 369
ISMFGINVA+SF APR+ A+A L+++ + + P+ +F I+ LA+ P+A +
Sbjct 294 ISMFGINVASSFNAPRILEAMARENQFSKSLTKRTKNNFPIRTFFISVLLAILIPMAFEY 353
Query 370 DNLHLTGLAVIARFVQFIIVPIALIALARSQAVEHA-AVRRNAFTDKVLPLVAIVVSVGL 428
+ ++L L+ + RF+ FI+VP+A+I R + E ++N +TD V+P+++IV+ + L
Sbjct 354 NMVNLITLSAMVRFLGFIVVPLAVIQFYRGKTAEPVLNAQKNIWTDIVVPILSIVLVIFL 413
Query 429 AVSYDYRCIFLVRG------GPNYFSIALIVITFIVVPAMAYLHYYRIIRRVGDRPSTR 481
V Y+++ F V G N+++IA+++ FIV+P L + I R+ DR +++
Sbjct 414 LVEYNWKAQFGVVNASGQVTGINWYAIAMMIFGFIVLP----LIMFFISRK--DRKASK 466
>gi|343520981|ref|ZP_08757949.1| amino acid permease [Parvimonas sp. oral taxon 393 str. F0440]
gi|343396187|gb|EGV08724.1| amino acid permease [Parvimonas sp. oral taxon 393 str. F0440]
Length=463
Score = 287 bits (735), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 178/474 (38%), Positives = 286/474 (61%), Gaps = 24/474 (5%)
Query 12 HKLGFCSVVMLGINSIIGAGIFLTPGEVIGLAGPFAPMAYVLAGIFAGVVAIVFATAARY 71
K+GF S+V+L INSIIG GIFL+PG V AG APM Y++A +F ++AI FA+AA+Y
Sbjct 4 KKMGFWSIVLLTINSIIGTGIFLSPGSVAKSAGTQAPMIYLVAAVFTSMLAITFASAAKY 63
Query 72 VRTNGASYAYTTAAFGRRIGIYVGVTHAITASIAWGVLASFFVSTLLRVAFPDKAWADAE 131
V +GA+YAY+ AAFG IG YVGVT I ASIAWG + +F V T L++ D A
Sbjct 64 VSKSGAAYAYSKAAFGNTIGQYVGVTRVIAASIAWGTMGTFVVRTTLKIFGLDSAN---- 119
Query 132 QLFSVKTLTFLGFIGVLLAINLFGNRAIKWANGTSTVGKAFALSAFIVGGLWIIT---TQ 188
+ T+ FL + +LL IN+FG + + + ST+GK AL I+ G+ I+
Sbjct 120 --LTYVTIGFLVLMSILLLINIFGTKLLTLISDISTIGKVLALVVTIIAGVAILIYTGES 177
Query 189 HVNNYATAWSAYSATPYSLLGVAEIGKGTFSSMALATIVALYAFTGFESIANAAEEMDAP 248
H++ + A TP + E+ TF + A I A YAFTGFES+A+ +++M+ P
Sbjct 178 HLSEL-SLLKAKDGTPL----IKEMTTTTFVT---AVIAAFYAFTGFESVASGSQDMEEP 229
Query 249 DRNLPRAIPIAIFSVGAIYLLTLTVAMLLGSNKIAASDDTVKLAAAIGNATFRTIIVVGA 308
++NLP+AIP+AI + AIY + V M + + S + V LA+ N ++V+GA
Sbjct 230 EKNLPKAIPLAIGIIAAIYFGIVLVGMHVNPVALVQSKEVVVLASIFTNPILEKVVVLGA 289
Query 309 LISMFGINVAASFGAPRLWTALADSGVLPTRLSRKNQYDVPMVSFAITASLALAFPLALR 368
L+SMFGINVAASF PR+ A+A +P +++ D+P+ +F TA A+ PL+ R
Sbjct 290 LVSMFGINVAASFHTPRVLEAMAKEKQVPEIFAKRLSNDLPLPAFLFTAIFAIIIPLSFR 349
Query 369 FDNLHLTGLAVIARFVQFIIVPIALIALARSQAVEHA-AVRRNAFTDKVLPLVAIVVSVG 427
+D+ + ++ I+RFVQF+IVP+A++ ++ E +++ TD ++PL+A+++S+
Sbjct 350 YDSTGIAIISSISRFVQFLIVPLAVVIFYFGKSKETVLDTKKSMVTDVIIPLIALLLSIL 409
Query 428 LAVSYDYRCIFLVRGG-----PNYFSIALIVITFIVVPAMAYLHYYRIIRRVGD 476
L V ++++ F V+ N +I +V+ ++V+P + ++ Y + +++ +
Sbjct 410 LLVKFNWKGQFSVKDSTGELVTNVKAIISMVVGYVVLPIIMFI-YTKTKKKLSN 462
>gi|268320179|ref|YP_003293835.1| hypothetical protein FI9785_1716 [Lactobacillus johnsonii FI9785]
gi|262398554|emb|CAX67568.1| hypothetical protein predicted by Glimmer/Critica [Lactobacillus
johnsonii FI9785]
Length=466
Score = 286 bits (733), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 175/477 (37%), Positives = 284/477 (60%), Gaps = 24/477 (5%)
Query 12 HKLGFCSVVMLGINSIIGAGIFLTPGEVIGLAGPFAPMAYVLAGIFAGVVAIVFATAARY 71
KLGF S+V+L INSIIG+GIFLTPG V+ AG A + Y +A IFA ++AI FA AA+Y
Sbjct 7 SKLGFWSIVLLAINSIIGSGIFLTPGNVVQQAGSKALIVYFIAAIFASILAISFAAAAKY 66
Query 72 VRTNGASYAYTTAAFGRRIGIYVGVTHAITASIAWGVLASFFVSTLLRVAFPDKAWADAE 131
V +GA+YAY+ AAFG +G Y+G+ +AS+AWGV+A + + + + +
Sbjct 67 VTKSGAAYAYSKAAFGNNVGFYMGILRYFSASVAWGVMAVGVIKSTISIF-----GGNPN 121
Query 132 QLFSVKTLTFLGFIGVLLAINLFGNRAIKWANGTSTVGKAFALSAFIVGGLWIITTQHVN 191
+ SV T+ FL + V+ INLFG + +K+ +T+GK AL IV G+ ++ +
Sbjct 122 ETMSV-TIGFLILMAVITIINLFGQKVVKYVMNLATIGKLAALVLIIVAGVVLLIVSGAS 180
Query 192 NYATAWSAYSATPYSLLGVAEIGKGTFSSMALATIVALYAFTGFESIANAAEEMDAPDRN 251
+ + + G + T + +A + A YAFTGFES+A+ +++M P +N
Sbjct 181 SNLSQVDQITQN-----GQKIVPTLTTTGFVMAIVSAFYAFTGFESVASGSDDMKNPAKN 235
Query 252 LPRAIPIAIFSVGAIYLLTLTVAMLLGSNKIAASDDTVKLAAAIGNATFRTIIVVGALIS 311
LPRAIP+AI + IY+ + VAM+L + A+ V +AA N R +I+VGAL+S
Sbjct 236 LPRAIPLAIIVIAVIYIGVVAVAMMLDPKALMATKQVVAIAAIFKNEILRDVILVGALVS 295
Query 312 MFGINVAASFGAPRLWTALADSGVLPTRLSRKNQYDVPMVSFAITASLALAFPLALRFDN 371
MFGINVA+SF APR+ A+A L+++ + + P+ +F I+ LA+ P+A ++
Sbjct 296 MFGINVASSFNAPRILEAMARENQFSKALTKRTKNNFPIRTFFISVLLAILIPMAFEYNM 355
Query 372 LHLTGLAVIARFVQFIIVPIALIALARSQAVEHA-AVRRNAFTDKVLPLVAIVVSVGLAV 430
++L L+ + RF+ FI+VP+A+I R + E ++N +TD V+P+++I + + L V
Sbjct 356 VNLITLSAMVRFLGFIVVPLAVIQFYRGKTAEPVLNAQKNVWTDIVVPILSIALVIFLLV 415
Query 431 SYDYRCIFLVRG------GPNYFSIALIVITFIVVPAMAYLHYYRIIRRVGDRPSTR 481
Y+++ F V G N+++IA+++ FI++P + + II R DR +++
Sbjct 416 EYNWKAQFGVVNAQGQVTGINWYAIAMMIFGFILLPLIMF-----IISR-KDRKASK 466
>gi|42519815|ref|NP_965745.1| hypothetical protein LJ0510 [Lactobacillus johnsonii NCC 533]
gi|41584105|gb|AAS09711.1| hypothetical protein LJ_0510 [Lactobacillus johnsonii NCC 533]
Length=466
Score = 286 bits (732), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 174/477 (37%), Positives = 283/477 (60%), Gaps = 24/477 (5%)
Query 12 HKLGFCSVVMLGINSIIGAGIFLTPGEVIGLAGPFAPMAYVLAGIFAGVVAIVFATAARY 71
KLGF S+V+L INSIIG+GIFLTPG V+ AG A + Y +A IFA ++AI FA AA+Y
Sbjct 7 SKLGFWSIVLLAINSIIGSGIFLTPGSVVQQAGSKALIVYFIAAIFASILAISFAAAAKY 66
Query 72 VRTNGASYAYTTAAFGRRIGIYVGVTHAITASIAWGVLASFFVSTLLRVAFPDKAWADAE 131
V +GA+YAY+ AAFG +G Y+G+ +AS+AWG++A + + + + +
Sbjct 67 VTKSGAAYAYSKAAFGNNVGFYMGILRYFSASVAWGIMAVGVIKSTISIF-----GGNPN 121
Query 132 QLFSVKTLTFLGFIGVLLAINLFGNRAIKWANGTSTVGKAFALSAFIVGGLWIITTQHVN 191
+ SV T+ FL + V+ INLFG + +K+ +T+GK AL IV G+ ++ +
Sbjct 122 ETMSV-TIGFLILMAVITVINLFGQKVVKYVMNLATIGKLAALVLIIVAGVVLLIVSGAS 180
Query 192 NYATAWSAYSATPYSLLGVAEIGKGTFSSMALATIVALYAFTGFESIANAAEEMDAPDRN 251
+ + + G + T + +A + A YAFTGFES+A+ +++M P +N
Sbjct 181 SNLSQVDQITQN-----GQKIVPTLTTTGFVMAIVSAFYAFTGFESVASGSDDMKNPAKN 235
Query 252 LPRAIPIAIFSVGAIYLLTLTVAMLLGSNKIAASDDTVKLAAAIGNATFRTIIVVGALIS 311
LPRAIP+AI + IY+ + VAM+L + + V +AA N R +I+VGAL+S
Sbjct 236 LPRAIPLAIIVIAVIYIGVVAVAMMLDPKALMTTKQVVAIAAIFKNEILRDVILVGALVS 295
Query 312 MFGINVAASFGAPRLWTALADSGVLPTRLSRKNQYDVPMVSFAITASLALAFPLALRFDN 371
MFGINVA+SF APR+ A+A L+++ + + P+ +F I+ A+ P+A ++
Sbjct 296 MFGINVASSFNAPRILEAMARENQFSKALTKRTKNNFPIRTFFISVLFAILIPMAFEYNM 355
Query 372 LHLTGLAVIARFVQFIIVPIALIALARSQAVEHA-AVRRNAFTDKVLPLVAIVVSVGLAV 430
++L L+ + RF+ FI+VP+A+I R + E +RN +TD V+P+++IV+ + L V
Sbjct 356 VNLITLSAMVRFLGFIVVPLAVIQFYRGKTAEPVLDAQRNVWTDIVVPILSIVLVIFLLV 415
Query 431 SYDYRCIFLVRG------GPNYFSIALIVITFIVVPAMAYLHYYRIIRRVGDRPSTR 481
Y+++ F V G N+++IA+++ FI++P + + II R DR +++
Sbjct 416 EYNWKAQFGVVNAQGQVTGINWYAIAMMIFGFILLPLIMF-----IISR-KDRKASK 466
>gi|256843919|ref|ZP_05549406.1| amino acid permease [Lactobacillus crispatus 125-2-CHN]
gi|256613824|gb|EEU19026.1| amino acid permease [Lactobacillus crispatus 125-2-CHN]
Length=463
Score = 286 bits (731), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 172/459 (38%), Positives = 280/459 (62%), Gaps = 24/459 (5%)
Query 12 HKLGFCSVVMLGINSIIGAGIFLTPGEVIGLAGPFAPMAYVLAGIFAGVVAIVFATAARY 71
KLGF S+V+L IN+IIG+GIFLTPG V+ AG A + Y++A IFA ++AI FA A++Y
Sbjct 7 DKLGFWSIVLLAINAIIGSGIFLTPGSVVQQAGSKALVVYLIAAIFAAILAISFAAASKY 66
Query 72 VRTNGASYAYTTAAFGRRIGIYVGVTHAITASIAWGVLASFFVSTLLRV--AFPDKAWAD 129
V +GA+YAY+ AAFG++IG Y+GV +AS+AWGV+A + + + + P+KA
Sbjct 67 VTKSGAAYAYSKAAFGKKIGFYMGVLRYFSASVAWGVMAVGVIKSTISIFGGNPNKAIN- 125
Query 130 AEQLFSVKTLTFLGFIGVLLAINLFGNRAIKWANGTSTVGKAFALSAFIVGGL-WIITTQ 188
T+ FL + ++ INLFG + +K+ +T+GK AL I+ G+ +ITT
Sbjct 126 -------VTIGFLILMAIITVINLFGQKVVKYVMNLATIGKLAALVLIIIAGVVLLITTG 178
Query 189 HVNNYATAWSAYSATPYSLLGVAEIGKGTFSSMALATIVALYAFTGFESIANAAEEMDAP 248
+N + G + T ++ +A + A YAFTGFES+A+ +E+M P
Sbjct 179 ASSNLG------QVDQLTQNGQKIVPTLTTTTFVMAIVSAFYAFTGFESVASGSEDMKNP 232
Query 249 DRNLPRAIPIAIFSVGAIYLLTLTVAMLLGSNKIAASDDTVKLAAAIGNATFRTIIVVGA 308
++NLPRAIP+AI + +Y+ + VAM+L + + V +AA N R +I+VGA
Sbjct 233 EKNLPRAIPLAILIIAVVYIGVVAVAMVLNPRALMTTKQVVAIAAIFNNEILRDVILVGA 292
Query 309 LISMFGINVAASFGAPRLWTALADSGVLPTRLSRKNQYDVPMVSFAITASLALAFPLALR 368
L+SMFGINVA+SF APR+ A+A G + L+++ + + P+ +F I+ LA+ P+A
Sbjct 293 LVSMFGINVASSFNAPRILEAMAREGQMSQALTKRTKNNFPIRTFFISVGLAILIPMAFE 352
Query 369 FDNLHLTGLAVIARFVQFIIVPIALIALARSQAVEH-AAVRRNAFTDKVLPLVAIVVSVG 427
++ ++L L+ + RF+ FI+VP+A+I R +A E ++ TD ++P+++ V+ +
Sbjct 353 YNMVNLITLSAMVRFLGFIVVPLAVIQFYRGKAKEDILKANKSVMTDVIVPILSGVIVIF 412
Query 428 LAVSYDYRCIFLVRG------GPNYFSIALIVITFIVVP 460
L V Y+++ F V G N+++IA++V F+++P
Sbjct 413 LLVEYNWKAQFGVVNAAGQVIGVNWYAIAMMVFGFVLLP 451
>gi|227878463|ref|ZP_03996403.1| APC family amino acid-polyamine-organocation transporter [Lactobacillus
crispatus JV-V01]
gi|256849518|ref|ZP_05554950.1| amino acid permease [Lactobacillus crispatus MV-1A-US]
gi|293381380|ref|ZP_06627381.1| amino acid permease [Lactobacillus crispatus 214-1]
7 more sequence titles
Length=463
Score = 285 bits (729), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 171/459 (38%), Positives = 280/459 (62%), Gaps = 24/459 (5%)
Query 12 HKLGFCSVVMLGINSIIGAGIFLTPGEVIGLAGPFAPMAYVLAGIFAGVVAIVFATAARY 71
KLGF S+V+L IN+IIG+GIFLTPG V+ AG A + Y++A IFA ++AI FA A++Y
Sbjct 7 DKLGFWSIVLLAINAIIGSGIFLTPGSVVQQAGSKALVVYLIAAIFAAILAISFAAASKY 66
Query 72 VRTNGASYAYTTAAFGRRIGIYVGVTHAITASIAWGVLASFFVSTLLRV--AFPDKAWAD 129
V +GA+YAY+ AAFG++IG Y+GV +AS+AWGV+A + + + + P+KA
Sbjct 67 VTKSGAAYAYSKAAFGKKIGFYMGVLRYFSASVAWGVMAVGVIKSTISIFGGNPNKAIN- 125
Query 130 AEQLFSVKTLTFLGFIGVLLAINLFGNRAIKWANGTSTVGKAFALSAFIVGGL-WIITTQ 188
T+ FL + ++ INLFG + +K+ +T+GK AL I+ G+ +ITT
Sbjct 126 -------VTIGFLILMAIITVINLFGQKVVKYVMNLATIGKLAALVLIIIAGVVLLITTG 178
Query 189 HVNNYATAWSAYSATPYSLLGVAEIGKGTFSSMALATIVALYAFTGFESIANAAEEMDAP 248
+N + G + T ++ ++ + A YAFTGFES+A+ +E+M P
Sbjct 179 ASSNLG------QVDQLTQNGQKIVPTLTTTTFVMSIVSAFYAFTGFESVASGSEDMKNP 232
Query 249 DRNLPRAIPIAIFSVGAIYLLTLTVAMLLGSNKIAASDDTVKLAAAIGNATFRTIIVVGA 308
++NLPRAIP+AI + +Y+ + VAM+L + + V +AA N R +I+VGA
Sbjct 233 EKNLPRAIPLAILIIAVVYIGVVAVAMVLNPRALMTTKQVVAIAAIFNNEILRDVILVGA 292
Query 309 LISMFGINVAASFGAPRLWTALADSGVLPTRLSRKNQYDVPMVSFAITASLALAFPLALR 368
L+SMFGINVA+SF APR+ A+A G + L+++ + + P+ +F I+ LA+ P+A
Sbjct 293 LVSMFGINVASSFNAPRILEAMAREGQMSQALTKRTKNNFPIRTFFISVGLAILIPMAFE 352
Query 369 FDNLHLTGLAVIARFVQFIIVPIALIALARSQAVEH-AAVRRNAFTDKVLPLVAIVVSVG 427
++ ++L L+ + RF+ FI+VP+A+I R +A E ++ TD ++P+++ V+ +
Sbjct 353 YNMVNLITLSAMVRFLGFIVVPLAVIQFYRGKAKEDILKANKSVMTDVIVPILSGVIVIF 412
Query 428 LAVSYDYRCIFLVRG------GPNYFSIALIVITFIVVP 460
L V Y+++ F V G N+++IA++V F+++P
Sbjct 413 LLVEYNWKAQFGVVNAAGQVIGVNWYAIAMMVFGFVLLP 451
>gi|262046187|ref|ZP_06019150.1| amino acid permease [Lactobacillus crispatus MV-3A-US]
gi|260573517|gb|EEX30074.1| amino acid permease [Lactobacillus crispatus MV-3A-US]
Length=463
Score = 284 bits (727), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 170/459 (38%), Positives = 280/459 (62%), Gaps = 24/459 (5%)
Query 12 HKLGFCSVVMLGINSIIGAGIFLTPGEVIGLAGPFAPMAYVLAGIFAGVVAIVFATAARY 71
KLGF S+V+L IN+IIG+GIFLTPG V+ AG A + Y++A IFA ++AI FA A++Y
Sbjct 7 DKLGFWSIVLLAINAIIGSGIFLTPGSVVQQAGSKALVVYLIAAIFAAILAISFAAASKY 66
Query 72 VRTNGASYAYTTAAFGRRIGIYVGVTHAITASIAWGVLASFFVSTLLRV--AFPDKAWAD 129
V +GA+YAY+ AAFG++IG Y+GV +AS+AWGV+A + + + + P+KA
Sbjct 67 VTKSGAAYAYSKAAFGKKIGFYMGVLRYFSASVAWGVMAVGVIKSTISIFGGNPNKAIN- 125
Query 130 AEQLFSVKTLTFLGFIGVLLAINLFGNRAIKWANGTSTVGKAFALSAFIVGGL-WIITTQ 188
T+ FL + ++ INLFG + +K+ +T+GK AL I+ G+ +ITT
Sbjct 126 -------VTIGFLILMAIITVINLFGQKVVKYVMNLATIGKLAALVLIIIAGVVLLITTG 178
Query 189 HVNNYATAWSAYSATPYSLLGVAEIGKGTFSSMALATIVALYAFTGFESIANAAEEMDAP 248
+N + G + T ++ ++ + A YAFTGFES+A+ +E+M P
Sbjct 179 ASSNLG------QVDQLTQNGQKIVPTLTTTTFVMSIVSAFYAFTGFESVASGSEDMKNP 232
Query 249 DRNLPRAIPIAIFSVGAIYLLTLTVAMLLGSNKIAASDDTVKLAAAIGNATFRTIIVVGA 308
++NLPRAIP+AI + +Y+ + VAM+L + + V +AA N R +I+VGA
Sbjct 233 EKNLPRAIPLAILIIAVVYIGVVAVAMVLNPRALMTTKQVVAIAAIFNNEILRDVILVGA 292
Query 309 LISMFGINVAASFGAPRLWTALADSGVLPTRLSRKNQYDVPMVSFAITASLALAFPLALR 368
L+SMFGINVA+SF APR+ A+A G + L+++ + + P+ +F I+ LA+ P+A
Sbjct 293 LVSMFGINVASSFNAPRILEAMAREGQMSQALTKRTKNNFPIRTFFISVGLAILIPMAFE 352
Query 369 FDNLHLTGLAVIARFVQFIIVPIALIALARSQAVEH-AAVRRNAFTDKVLPLVAIVVSVG 427
++ ++L L+ + RF+ FI+VP+A+I R +A E ++ TD ++P+++ V+ +
Sbjct 353 YNMVNLITLSAMVRFLGFIVVPLAVIQFYRGKAKEDILKANKSVMTDVIVPILSGVIVIF 412
Query 428 LAVSYDYRCIFLVRG------GPNYFSIALIVITFIVVP 460
L V Y+++ F + G N+++IA++V F+++P
Sbjct 413 LLVEYNWKAQFGIVNAAGQVIGVNWYAIAMMVFGFVLLP 451
>gi|227889248|ref|ZP_04007053.1| APC family amino acid-polyamine-organocation transporter [Lactobacillus
johnsonii ATCC 33200]
gi|227850050|gb|EEJ60136.1| APC family amino acid-polyamine-organocation transporter [Lactobacillus
johnsonii ATCC 33200]
Length=466
Score = 284 bits (726), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 174/477 (37%), Positives = 283/477 (60%), Gaps = 24/477 (5%)
Query 12 HKLGFCSVVMLGINSIIGAGIFLTPGEVIGLAGPFAPMAYVLAGIFAGVVAIVFATAARY 71
KLGF S+V+L INSIIG+GIFLTPG V+ AG A + Y +A IFA ++AI FA AA+Y
Sbjct 7 SKLGFWSIVLLAINSIIGSGIFLTPGNVVQQAGSKALIVYFIAAIFASILAISFAAAAKY 66
Query 72 VRTNGASYAYTTAAFGRRIGIYVGVTHAITASIAWGVLASFFVSTLLRVAFPDKAWADAE 131
V +GA+YAY+ AAFG +G Y+G+ +AS+AWGV+A + + + + +
Sbjct 67 VTKSGAAYAYSKAAFGNNVGFYMGILRYFSASVAWGVMAVGVIKSTISIF-----GGNPN 121
Query 132 QLFSVKTLTFLGFIGVLLAINLFGNRAIKWANGTSTVGKAFALSAFIVGGLWIITTQHVN 191
+ SV T+ FL + V+ INLFG + +K+ +T+GK AL IV G+ ++ +
Sbjct 122 ETTSV-TIGFLILMAVITIINLFGQKVVKYVMNLATIGKLAALVLIIVAGVVLLIVSGAS 180
Query 192 NYATAWSAYSATPYSLLGVAEIGKGTFSSMALATIVALYAFTGFESIANAAEEMDAPDRN 251
+ + + G + T + +A + A YAFTGFES+A+ +++M P +N
Sbjct 181 SNLSQVDQITQN-----GQKIVPTLTTTGFVMAIVSAFYAFTGFESVASGSDDMKNPAKN 235
Query 252 LPRAIPIAIFSVGAIYLLTLTVAMLLGSNKIAASDDTVKLAAAIGNATFRTIIVVGALIS 311
LPRAIP+AI + IY+ + VAM+L + + V +AA N R +I+VGAL+S
Sbjct 236 LPRAIPLAIIVIAVIYIGVVAVAMMLDPKALMTTKQVVAIAAIFKNEILRDVILVGALVS 295
Query 312 MFGINVAASFGAPRLWTALADSGVLPTRLSRKNQYDVPMVSFAITASLALAFPLALRFDN 371
MFGINVA+SF APR+ A+A L+++ + + P+ +F I+ LA+ P+A ++
Sbjct 296 MFGINVASSFNAPRILEAMARENQFSKALTKRTKNNFPIRTFFISVLLAILIPMAFEYNM 355
Query 372 LHLTGLAVIARFVQFIIVPIALIALARSQAVEHA-AVRRNAFTDKVLPLVAIVVSVGLAV 430
++L L+ + RF+ FI+VP+A+I R + E ++N +TD V+P+++I + + L V
Sbjct 356 VNLITLSAMVRFLGFIVVPLAVIQFYRGKTAEPVLNAQKNVWTDIVVPILSIALVIFLLV 415
Query 431 SYDYRCIFLVRG------GPNYFSIALIVITFIVVPAMAYLHYYRIIRRVGDRPSTR 481
Y+++ F V G N+++IA+++ FI++P + + II R DR +++
Sbjct 416 EYNWKAQFGVVNAQGQVTGINWYAIAMMIFGFILLPLIMF-----IISR-KDRKASK 466
>gi|385826627|ref|YP_005862969.1| hypothetical protein [Lactobacillus johnsonii DPC 6026]
gi|329668071|gb|AEB94019.1| hypothetical protein LJP_1703c [Lactobacillus johnsonii DPC 6026]
gi|338761848|gb|EGP13117.1| amino acid permease domain containing protein [Lactobacillus
johnsonii pf01]
Length=466
Score = 284 bits (726), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 175/479 (37%), Positives = 282/479 (59%), Gaps = 33/479 (6%)
Query 13 KLGFCSVVMLGINSIIGAGIFLTPGEVIGLAGPFAPMAYVLAGIFAGVVAIVFATAARYV 72
KLGF S+V+L INSIIG+GIFLTPG V+ AG A + Y +A IFA ++AI FA AA+YV
Sbjct 8 KLGFWSIVLLAINSIIGSGIFLTPGSVVQQAGSKALIVYFIAAIFASILAISFAAAAKYV 67
Query 73 RTNGASYAYTTAAFGRRIGIYVGVTHAITASIAWGVLASFFVSTLLRVAFPDKAWADAEQ 132
+GA+YAY+ AAFG +G Y+G+ +AS+AWGV+A + + + + + +
Sbjct 68 TKSGAAYAYSKAAFGNNVGFYMGILRYFSASVAWGVMAVGVIKSTISIF-----GGNPNE 122
Query 133 LFSVKTLTFLGFIGVLLAINLFGNRAIKWANGTSTVGKAFALSAFIVGGLWIITTQHVNN 192
SV T+ FL + V+ INLFG + +K+ +T+GK AL IV G+ ++
Sbjct 123 TMSV-TIGFLILMAVITVINLFGQKVVKYVMNLATIGKLAALVLIIVAGVVLLIV----- 176
Query 193 YATAWSAYSATPYSLLGVAEIGKG-----TFSSMALATIVALYAFTGFESIANAAEEMDA 247
S S+ + + + G+ T + +A + A YAFTGFES+A+ +++M
Sbjct 177 -----SGASSNLSQVDQITQHGQKIVPTLTTTGFVMAIVSAFYAFTGFESVASGSDDMKN 231
Query 248 PDRNLPRAIPIAIFSVGAIYLLTLTVAMLLGSNKIAASDDTVKLAAAIGNATFRTIIVVG 307
P +NLPRAIP+AI + IY+ + VAM+L + + V +AA N R +I+VG
Sbjct 232 PAKNLPRAIPLAIIVIAVIYIGVVAVAMMLDPKALMTTKQVVAIAAIFKNEILRDVILVG 291
Query 308 ALISMFGINVAASFGAPRLWTALADSGVLPTRLSRKNQYDVPMVSFAITASLALAFPLAL 367
AL+SMFGINVA+SF APR+ A+A L+++ + + P+ +F I+ LA+ P+A
Sbjct 292 ALVSMFGINVASSFNAPRILEAMARENQFSKALTKRTKNNFPIRTFFISVLLAILIPMAF 351
Query 368 RFDNLHLTGLAVIARFVQFIIVPIALIALARSQAVEHA-AVRRNAFTDKVLPLVAIVVSV 426
++ ++L L+ + RF+ FI+VP+A+I R + E ++N +TD V+P+++I + +
Sbjct 352 EYNMVNLITLSAMVRFLGFIVVPLAVIQFYRGKTAEPVLDAQKNVWTDIVVPILSIALVI 411
Query 427 GLAVSYDYRCIFLVRG------GPNYFSIALIVITFIVVPAMAYLHYYRIIRRVGDRPS 479
L V Y+++ F V G N+++IA+++ FI++P + + II R + S
Sbjct 412 FLLVEYNWKAQFGVVNAQGQVTGINWYAIAMMIFGFILLPLIMF-----IISRKDHKAS 465
>gi|291458472|ref|ZP_06597862.1| amino acid permease [Oribacterium sp. oral taxon 078 str. F0262]
gi|291419005|gb|EFE92724.1| amino acid permease [Oribacterium sp. oral taxon 078 str. F0262]
Length=463
Score = 284 bits (726), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 180/463 (39%), Positives = 281/463 (61%), Gaps = 21/463 (4%)
Query 12 HKLGFCSVVMLGINSIIGAGIFLTPGEVIGLAGPFAPMAYVLAGIFAGVVAIVFATAARY 71
K+GF S+V+L IN+IIG GIFL+PG V L+G AP Y+ A +FA V+A+ FA+A+RY
Sbjct 6 KKIGFWSIVLLTINAIIGTGIFLSPGGVAKLSGSLAPFIYICAAVFAAVLALSFASASRY 65
Query 72 VRTNGASYAYTTAAFGRRIGIYVGVTHAITASIAWGVLASFFVSTLLRVAFPDKAWADAE 131
V NGA+YAY AAFG G+YVG+T + ASIAWGV+A+ V T L++ D + D
Sbjct 66 VVKNGAAYAYCEAAFGENAGLYVGITRFVAASIAWGVMATGVVKTALQILGQDSS--DKG 123
Query 132 QLFSVKTLTFLGFIGVLLAINLFGNRAIKWANGTSTVGKAFALSAFIVGGLWIITTQHVN 191
++ TL FL + +LL INL G R + + + ST+GK AL+ I+ G +I+ T HVN
Sbjct 124 KI----TLGFLLLMTILLVINLVGTRVLTFVSNLSTIGKLSALAITILAGFYILFTTHVN 179
Query 192 NYATAWSAYSATPYSLLGVAEIGKGTFSSMALATIVALYAFTGFESIANAAEEMDAPDRN 251
+ L V + G F + A I A YAFTGFES+A+ A +M+ P++N
Sbjct 180 RILEVDQLLNDAGEKL--VPPLTSGGFVT---AVIAAFYAFTGFESVASGASDMEEPEKN 234
Query 252 LPRAIPIAIFSVGAIYLLTLTVAMLLGSNKIAASDDTVKLAAAIGNATFRTIIVVGALIS 311
LP+A+P+AI + IY + V+M++ + +S D V LAA N + II++GAL+S
Sbjct 235 LPKALPLAISIIALIYFGIVFVSMMIDPVAMVSSKDVVVLAAVFQNPLIKNIIILGALVS 294
Query 312 MFGINVAASFGAPRLWTALADSGVLPTRLSRKNQYDVPMVSFAITASLALAFPLALRFDN 371
MFGINVAASF PR+ A+A+ G +P +++ D+P+ +F +T LA+ P+A +D
Sbjct 295 MFGINVAASFLTPRVIEAMANDGQVPKLFAKRTGRDLPLPAFLLTVLLAIVIPMAFNYDM 354
Query 372 LHLTGLAVIARFVQFIIVPIALIAL----ARSQAVEHAAVRRNAFTDKVLPLVAIVVSVG 427
+ ++ I+RFVQF++VP+A+I R +++ ++N D + L+++V+++
Sbjct 355 RGIMIISSISRFVQFVLVPLAVITFYYGKNRKPIIDNP--KKNFILDVPVSLLSLVLTLL 412
Query 428 LAVSYDYRCIFLVR----GGPNYFSIALIVITFIVVPAMAYLH 466
L + + F V PN ++I +++ +IV+P + YL+
Sbjct 413 LLAKFKWAAQFSVTVDGVTKPNLYAIFAMILGYIVLPILVYLY 455
>gi|375091548|ref|ZP_09737837.1| hypothetical protein HMPREF9709_00699 [Helcococcus kunzii ATCC
51366]
gi|374563070|gb|EHR34392.1| hypothetical protein HMPREF9709_00699 [Helcococcus kunzii ATCC
51366]
Length=459
Score = 281 bits (720), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 182/455 (40%), Positives = 272/455 (60%), Gaps = 17/455 (3%)
Query 12 HKLGFCSVVMLGINSIIGAGIFLTPGEVIGLAGPFAPMAYVLAGIFAGVVAIVFATAARY 71
KLGF S+++L INSIIG GIFL+PG V+ AG A + YVLA IFA V+A+ FA AA+Y
Sbjct 3 KKLGFYSIILLTINSIIGTGIFLSPGSVVAKAGDKALIVYVLAAIFAAVLAVTFAAAAKY 62
Query 72 VRTNGASYAYTTAAFGRRIGIYVGVTHAITASIAWGVLASFFVSTLLRVAFPDKAWADAE 131
V + GA+YAYT AFG G YVG+T ASIAWGV+ + + T+L + F D+
Sbjct 63 VSSGGAAYAYTKEAFGNDAGFYVGITRYFAASIAWGVMGTAVIKTVLNI-FK----MDSS 117
Query 132 QLFSVKTLTFLGFIGVLLAINLFGNRAIKWANGTSTVGKAFALSAFIVGGLWIITTQHVN 191
++ ++ FL + VLL INL G + + N ST+GK AL I+ G II VN
Sbjct 118 NTVNI-SIGFLVLMAVLLIINLLGTKVFEAINNLSTIGKVAALITTILVGFGIIIFSGVN 176
Query 192 NYATAWSAYSATPYSLLGVAEIGKGTFSSMALATIVALYAFTGFESIANAAEEMDAPDRN 251
N + + + +L +I S+ +A I A YAFTGFES+A+ +E+M+ P++N
Sbjct 177 NIDSIKNLVDDSGKALGSNMDI-----STWVMAVIAAFYAFTGFESVASGSEDMEEPEKN 231
Query 252 LPRAIPIAIFSVGAIYLLTLTVAMLLGSNKIAASDDTVKLAAAIGNATFRTIIVVGALIS 311
LPRAIPIAI + IY+ + VA+++ I S + V LA N II+VGALIS
Sbjct 232 LPRAIPIAIGIIAIIYIGIVGVAIMIDPKAIVESKEVVALADVFQNPIINRIIIVGALIS 291
Query 312 MFGINVAASFGAPRLWTALADSGVLPTRLSRKNQYDVPMVSFAITASLALAFPLALRFDN 371
MFGINVAASF PR+ A++ +P+ +++ P+VSF +T ++A+ PLA +FD
Sbjct 292 MFGINVAASFHTPRILEAMSRQKQIPSVFAKRTDKGFPIVSFLVTITIAIIIPLAFKFDM 351
Query 372 LHLTGLAVIARFVQFIIVPIALIALARSQAVEHA-AVRRNAFTDKVLPLVAIVVSVGLAV 430
+ ++ I+RFVQF+IVP+ALI + V+++ D ++P++A V ++ L
Sbjct 352 TSIMIISSISRFVQFLIVPLALITFYYGKEKGKVNKVKKSTIVDLIIPIIAFVFTLLLLY 411
Query 431 SYDYRCIF--LVRGGP---NYFSIALIVITFIVVP 460
++++ F L G N F+I ++I ++++P
Sbjct 412 KFNWKGQFTTLNESGESVTNTFAIVSMIIGYVIMP 446
>gi|366086773|ref|ZP_09453258.1| amino acid permease [Lactobacillus zeae KCTC 3804]
Length=460
Score = 281 bits (719), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 179/470 (39%), Positives = 277/470 (59%), Gaps = 25/470 (5%)
Query 12 HKLGFCSVVMLGINSIIGAGIFLTPGEVIGLAGPFAPMAYVLAGIFAGVVAIVFATAARY 71
K+GF S+V+L INSIIG+GIFL+PG V+ +G A + Y +A FA ++A+ FA AA+Y
Sbjct 3 KKIGFWSIVLLAINSIIGSGIFLSPGAVVQSSGSKALILYGIAAFFAAILAVTFAAAAKY 62
Query 72 VRTNGASYAYTTAAFGRRIGIYVGVTHAITASIAWGVLASFFVSTLLRV-AFPDKAWADA 130
V +GA+Y Y AAFG +G YVG+T I IAWGV+A+ V T+LR+ F D
Sbjct 63 VAHSGAAYIYAKAAFGEHVGFYVGITRYIATCIAWGVMATAVVKTVLRIFGF------DQ 116
Query 131 EQLFSVKTLTFLGFIGVLLAINLFGNRAIKWANGTSTVGKAFALSAFIVGGLWIITTQHV 190
L V T++ + + LL IN FG + + N ST+GK AL FI+ G+ +I T V
Sbjct 117 NDLMLV-TISLILLMLSLLVINCFGPKFFELVNNLSTIGKLAALLVFIIFGIGVIATTGV 175
Query 191 NNYATAWSAYSATPYSLLGVAEIGKGTFSSMALATIVALYAFTGFESIANAAEEMDAPDR 250
N++A SA T S++ + I A YAFTGFES+A+ A++MD P++
Sbjct 176 NHFAQIDRLTSAGT----------NATLSTLVMGVIAAFYAFTGFESVASGADDMDKPEK 225
Query 251 NLPRAIPIAIFSVGAIYLLTLTVAMLLGSNKIAASDDTVKLAAAIGNATFRTIIVVGALI 310
NLP AIP+AI + +Y+ + +AM++ + A+ + V L A N + I++ GALI
Sbjct 226 NLPIAIPLAISVIAVVYIGVVWIAMMVNPQAMMATKEVVALVAVFNNPLIQNIVLYGALI 285
Query 311 SMFGINVAASFGAPRLWTALADSGVLPTRLSRKNQYDVPMVSFAITASLALAFPLALRFD 370
SM GINVAASF +PR+ A+A G LP+ L+ + + P+ +F +T +LA+ P+A R+D
Sbjct 286 SMLGINVAASFHSPRVLEAIAKQGQLPSWLAGRTAKNFPLPAFLLTIALAVLLPMAFRYD 345
Query 371 NLHLTGLAVIARFVQFIIVPIALIALARSQAVEH--AAVRRNAFTDKVLPLVAIVVSVGL 428
+ L+ I+RFVQF+I+P+ ++ R + R N TD V P V+++++V L
Sbjct 346 MTSIIILSSISRFVQFLIIPLCVMKFFRGRGDRRLINPARPNVLTDMVCPAVSLILTVLL 405
Query 429 AVSYDYRCIFLV-----RGGPNYFSIALIVITFIVVPAMAYLHYYRIIRR 473
+ +D+ F + + PNYF+I +++ +IV+ L Y+ ++
Sbjct 406 LIKFDWIGQFTILDANNQHAPNYFAIVAMILGYIVILFGMMLFNYQTKKK 455
>gi|373106898|ref|ZP_09521198.1| hypothetical protein HMPREF9623_00862 [Stomatobaculum longum]
gi|371651837|gb|EHO17263.1| hypothetical protein HMPREF9623_00862 [Stomatobaculum longum]
Length=461
Score = 281 bits (718), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 182/466 (40%), Positives = 274/466 (59%), Gaps = 21/466 (4%)
Query 12 HKLGFCSVVMLGINSIIGAGIFLTPGEVIGLAGPFAPMAYVLAGIFAGVVAIVFATAARY 71
KLGF S+V+L IN++IG GIFL+PG V G AP Y A +FA +A+ FA+A+RY
Sbjct 6 QKLGFWSIVLLTINAVIGTGIFLSPGSVAKQVGSIAPEIYFCAALFAACLAVTFASASRY 65
Query 72 VRTNGASYAYTTAAFGRRIGIYVGVTHAITASIAWGVLASFFVSTLLRVAFPDKAWADAE 131
V +GA+YAYT AAFG G+YVG T + ASIAWGV+A+ V T L++ D
Sbjct 66 VVKSGAAYAYTEAAFGENAGLYVGATRFVAASIAWGVMATGVVKTALQIL-----RLDTS 120
Query 132 QLFSVKTLTFLGFIGVLLAINLFGNRAIKWANGTSTVGKAFALSAFIVGGLWIITTQHVN 191
++ +V TL FL + +LL IN G R ++ + STVGK AL +V GL++I T VN
Sbjct 121 KISNV-TLGFLCLMVILLIINFCGMRVFRFVSNLSTVGKLGALVLTVVAGLFLILTTGVN 179
Query 192 NYATAWSAYSATPYSLLGVAEIGKGTFSSMALATIVALYAFTGFESIANAAEEMDAPDRN 251
A + L + + G F + A I A YAFTGFES+A+ + +M+ P++N
Sbjct 180 RLAEVELLTNDAGEKL--IPALTTGGFVT---AVISAFYAFTGFESVASGSGDMENPEKN 234
Query 252 LPRAIPIAIFSVGAIYLLTLTVAMLLGSNKIAASDDTVKLAAAIGNATFRTIIVVGALIS 311
LPRA+P+AI + IY + VAM + + S D V LAA N + +IV GAL+S
Sbjct 235 LPRALPLAIGIIALIYCGIVFVAMRIDPVSLVTSKDVVVLAAVFPNPLLKGLIVGGALVS 294
Query 312 MFGINVAASFGAPRLWTALADSGVLPTRLSRKNQYDVPMVSFAITASLALAFPLALRFDN 371
MFGINVAASF PR+ A+A G++P +++ + VP+ +F +T +LA+ P+A R+D
Sbjct 295 MFGINVAASFLTPRVLEAMASDGLVPPIFAKRTESGVPIYAFLLTVALAIIIPMAFRYDM 354
Query 372 LHLTGLAVIARFVQFIIVPIALIAL----ARSQAVEHAAVRRNAFTDKVLPLVAIVVSVG 427
+ ++ I+RFVQF++VP+A+I R + + + +RN D L+++ ++V
Sbjct 355 RGIMIISSISRFVQFVLVPLAVITFYYGKNRGEVIPNP--KRNFVLDVPFSLLSLGLTVF 412
Query 428 LAVSYDYRCIFLVRGG----PNYFSIALIVITFIVVPAMAYLHYYR 469
L + + F ++ PNY++I + I ++V+P YL+ R
Sbjct 413 LLAKFKWAAQFSLQVDGKTVPNYYAIVAMFIGYVVLPVGVYLYRAR 458
>gi|377556597|ref|ZP_09786297.1| Amino acid transport protein [Lactobacillus gastricus PS3]
gi|376168301|gb|EHS87089.1| Amino acid transport protein [Lactobacillus gastricus PS3]
Length=455
Score = 278 bits (712), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 167/454 (37%), Positives = 275/454 (61%), Gaps = 20/454 (4%)
Query 11 IHKLGFCSVVMLGINSIIGAGIFLTPGEVIGLAGPFAPMAYVLAGIFAGVVAIVFATAAR 70
I KLGF S+V+ INSIIG+GIFLTPG V+ + G AP+AY+ A + A V+AI FA+AA+
Sbjct 6 IKKLGFWSIVLFAINSIIGSGIFLTPGSVVSMVGAKAPLAYLGAAVIAIVLAISFASAAK 65
Query 71 YVRTNGASYAYTTAAFGRRIGIYVGVTHAITASIAWGVLASFFVSTLLRVAFPDKAWADA 130
YV +G +YAY A+FG R G Y+GV +AS+AWGV+A + + L + +
Sbjct 66 YVSKSGGAYAYAKASFGDRFGFYMGVVRYFSASVAWGVMAVSVIKSTLSI------FGGN 119
Query 131 EQLFSVKTLTFLGFIGVLLAINLFGNRAIKWANGTSTVGKAFALSAFIVGGLWIITTQHV 190
F ++ F+ + ++ +N G W N ST+GK +L I+ G+ I+
Sbjct 120 PNDFRSVSIGFVILMIIITIVNFLGEEFFTWVNNLSTIGKLTSLVILIIAGVSILLVTGQ 179
Query 191 NNYATAWSAYSATPYSLLGVAE-IGKGTFSSMALATIVALYAFTGFESIANAAEEMDAPD 249
NN++ L G I T SS +A + A YAFTGFES+++ +E+M P+
Sbjct 180 NNFSQI--------NRLTGNGGLIPSVTTSSFVMAMVAAFYAFTGFESVSSGSEDMIKPE 231
Query 250 RNLPRAIPIAIFSVGAIYLLTLTVAMLLGSNKIAASDDTVKLAAAIGNATFRTIIVVGAL 309
+NLPRAIP+AI + IY+ T++VAM++ I ++ V LAA N +TII++GAL
Sbjct 232 KNLPRAIPLAIIIISIIYIGTISVAMMINPVAIVKTNQVVALAAVFSNRILQTIILLGAL 291
Query 310 ISMFGINVAASFGAPRLWTALADSGVLPTRLSRKNQYDVPMVSFAITASLALAFPLALRF 369
+SMFGINVAASF +PR+ A+A+ G +P ++++N+ +P+V++ IT +LA+ P++ +
Sbjct 292 VSMFGINVAASFNSPRILEAMANEGQMPHWIAKRNRKGIPIVAYIITVALAILIPMSFLY 351
Query 370 DNLHLTGLAVIARFVQFIIVPIALIAL---ARSQAVEHAAVRRNAFTDKVLPLVAIVVSV 426
+ + ++ + RF +FI++PI ++ Q + +A +N +TD ++PL+ ++++
Sbjct 352 ETTLVILMSAMVRFFEFIVIPIGVVGYYYDKHQQPILNAP--KNWWTDVLIPLLGVLLTA 409
Query 427 GLAVSYDYRCIFLVRGGPNYFSIALIVITFIVVP 460
L YD+ F + G N+++I+ ++ F+V+P
Sbjct 410 FLLFEYDWVGEFSIHGHLNWYAISGMIGGFVVLP 443
>gi|238855438|ref|ZP_04645748.1| amino acid transporter [Lactobacillus jensenii 269-3]
gi|313472726|ref|ZP_07813214.1| amino acid permease [Lactobacillus jensenii 1153]
gi|238831928|gb|EEQ24255.1| amino acid transporter [Lactobacillus jensenii 269-3]
gi|313448848|gb|EEQ68304.2| amino acid permease [Lactobacillus jensenii 1153]
Length=469
Score = 278 bits (712), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 165/459 (36%), Positives = 263/459 (58%), Gaps = 17/459 (3%)
Query 12 HKLGFCSVVMLGINSIIGAGIFLTPGEVIGLAGPFAPMAYVLAGIFAGVVAIVFATAARY 71
KLGF S+V+L INSIIG+GIFLTPG V+ G A + Y++A FA ++AI FA AA+Y
Sbjct 8 DKLGFWSIVLLAINSIIGSGIFLTPGSVVSRVGSKALLVYLIAASFAAILAITFAAAAKY 67
Query 72 VRTNGASYAYTTAAFGRRIGIYVGVTHAITASIAWGVLASFFVSTLLRVAFPDKAWADAE 131
V +GA+YAY+ AAFG +G Y+GV +AS+AWGV+A + + + + D
Sbjct 68 VTKSGAAYAYSKAAFGENVGFYMGVLRYFSASVAWGVMAVAVIKSTISIFGGD------P 121
Query 132 QLFSVKTLTFLGFIGVLLAINLFGNRAIKWANGTSTVGKAFALSAFIVGGLWIITTQHVN 191
F ++ F+ + ++ INLFG +K+ ST+GK AL I+ G +++ + N
Sbjct 122 NSFQNVSIGFVVLMLLIWVINLFGQSTVKYIMNLSTIGKLLALGLVILAGAFLLLSTGEN 181
Query 192 NYATAWSAYSATPYSLLGVAEIGKGTFSSMALATIVALYAFTGFESIANAAEEMDAPDRN 251
++ + G + T SS +A + A YAFTGFE+IA+ +E+M P +N
Sbjct 182 HFG------EIDTLQVAGKNVVPAVTTSSFVMAIVSAFYAFTGFEAIASGSEDMKEPSKN 235
Query 252 LPRAIPIAIFSVGAIYLLTLTVAMLLGSNKIAASDDTVKLAAAIGNATFRTIIVVGALIS 311
LPRAIP+AI + +Y+ + VAM+L ++ + V +AA + R II+VGAL+S
Sbjct 236 LPRAIPLAILIIALVYIGVVAVAMVLNPRELLETKQVVAVAAIFSSPILRAIILVGALVS 295
Query 312 MFGINVAASFGAPRLWTALADSGVLPTRLSRKNQYDVPMVSFAITASLALAFPLALRFDN 371
MFGIN+A+SF APR+ A+A P L+++ + + P +F IT LA+ P+A +
Sbjct 296 MFGINIASSFHAPRILEAMARENQFPKWLAKRTKRNFPARTFLITLILAVLVPMAFHYST 355
Query 372 LHLTGLAVIARFVQFIIVPIALIALARSQAVEHA-AVRRNAFTDKVLPLVAIVVSVGLAV 430
+L L+ RF+ FI+VP+ +I + E RN TD + P+ +I++++ L
Sbjct 356 DNLIILSATVRFLGFIVVPLGVIKFYLGRNGEPVLTTNRNKITDLIFPIFSILITLFLLY 415
Query 431 SYDYRCIFLVR----GGPNYFSIALIVITFIVVPAMAYL 465
YD+ F V N+F+I ++ +++PA+ ++
Sbjct 416 KYDWAAEFSVTINGVTSLNWFAIGALIFGAVILPAILFV 454
>gi|256851625|ref|ZP_05557013.1| amino acid permease [Lactobacillus jensenii 27-2-CHN]
gi|260661658|ref|ZP_05862570.1| amino acid permease [Lactobacillus jensenii 115-3-CHN]
gi|297205232|ref|ZP_06922628.1| amino acid permease [Lactobacillus jensenii JV-V16]
gi|256615583|gb|EEU20772.1| amino acid permease [Lactobacillus jensenii 27-2-CHN]
gi|260547715|gb|EEX23693.1| amino acid permease [Lactobacillus jensenii 115-3-CHN]
gi|297149810|gb|EFH30107.1| amino acid permease [Lactobacillus jensenii JV-V16]
Length=469
Score = 278 bits (711), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 167/459 (37%), Positives = 263/459 (58%), Gaps = 17/459 (3%)
Query 12 HKLGFCSVVMLGINSIIGAGIFLTPGEVIGLAGPFAPMAYVLAGIFAGVVAIVFATAARY 71
KLGF S+V+L INSIIG+GIFLTPG V+ G A + Y++A FA ++AI FA AA+Y
Sbjct 8 DKLGFWSIVLLAINSIIGSGIFLTPGSVVSRVGSKALLVYLIAASFAAILAITFAAAAKY 67
Query 72 VRTNGASYAYTTAAFGRRIGIYVGVTHAITASIAWGVLASFFVSTLLRVAFPDKAWADAE 131
V +GA+YAY+ AAFG +G Y+GV +AS+AWGV+A + + + + D
Sbjct 68 VTKSGAAYAYSKAAFGENVGFYMGVLRYFSASVAWGVMAVAVIKSTISIFGGD------P 121
Query 132 QLFSVKTLTFLGFIGVLLAINLFGNRAIKWANGTSTVGKAFALSAFIVGGLWIITTQHVN 191
F ++ F+ + ++ INLFG +K+ ST+GK AL I G +++ + N
Sbjct 122 NSFQNVSIGFVVLMLLIWIINLFGQSVVKYIMNLSTIGKLLALGLVIFVGAFLLLSTGEN 181
Query 192 NYATAWSAYSATPYSLLGVAEIGKGTFSSMALATIVALYAFTGFESIANAAEEMDAPDRN 251
+++ + G I T SS +A + A YAFTGFESIA+ +E+M P +N
Sbjct 182 HFS------EIDTLQIAGKNVIPAVTTSSFVMAIVSAFYAFTGFESIASGSEDMKNPAKN 235
Query 252 LPRAIPIAIFSVGAIYLLTLTVAMLLGSNKIAASDDTVKLAAAIGNATFRTIIVVGALIS 311
LPRAIP+AI + +Y+ + VAM+L ++ + V +AA + R II+VGAL+S
Sbjct 236 LPRAIPLAILIIALVYIGVVAVAMVLNPRELLETKQVVAVAAIFSSPVLRAIILVGALVS 295
Query 312 MFGINVAASFGAPRLWTALADSGVLPTRLSRKNQYDVPMVSFAITASLALAFPLALRFDN 371
MFGIN+A+SF APR+ A+A P L+++ + + P +F IT LA+ P+A +
Sbjct 296 MFGINIASSFHAPRILEAMARENQFPKWLAKRTKRNFPARTFLITLILAVLVPMAFHYST 355
Query 372 LHLTGLAVIARFVQFIIVPIALIALARSQAVEH-AAVRRNAFTDKVLPLVAIVVSVGLAV 430
+L L+ RF+ FI+VP+ +I + VE +N TD + P+ +I++++ L
Sbjct 356 DNLIILSATVRFLGFIVVPLGVIRFYLGKNVEPILTANKNKITDLIFPIFSILITLFLLY 415
Query 431 SYDYRCIFLVR----GGPNYFSIALIVITFIVVPAMAYL 465
YD+ F V N+F+I + +++PA+ ++
Sbjct 416 KYDWAAEFSVTVNGVTSLNWFAIGALAFGAVILPAILFI 454
Lambda K H
0.328 0.139 0.411
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 1388024903200
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Oct 14, 2012 4:13 PM
Number of letters in database: 7,218,481,314
Number of sequences in database: 21,062,489
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40