BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv1981c
Length=322
Score E
Sequences producing significant alignments: (Bits) Value
gi|15841457|ref|NP_336494.1| ribonucleotide-diphosphate reductas... 674 0.0
gi|31793160|ref|NP_855653.1| ribonucleotide-diphosphate reductas... 671 0.0
gi|340626994|ref|YP_004745446.1| ribonucleoside-diphosphate redu... 669 0.0
gi|1395207|gb|AAB81405.1| ribonucleotide reductase R2-1 small su... 660 0.0
gi|254819781|ref|ZP_05224782.1| ribonucleotide-diphosphate reduc... 572 4e-161
gi|325677552|ref|ZP_08157215.1| ribonucleotide-diphosphate reduc... 542 2e-152
gi|312137650|ref|YP_004004986.1| ribonucleoside-diphosphate redu... 541 5e-152
gi|325675841|ref|ZP_08155525.1| ribonucleotide-diphosphate reduc... 492 3e-137
gi|312140539|ref|YP_004007875.1| ribonucleoside-diphosphate redu... 492 4e-137
gi|226365904|ref|YP_002783687.1| ribonucleotide-diphosphate redu... 490 1e-136
gi|169630485|ref|YP_001704134.1| ribonucleotide-diphosphate redu... 489 2e-136
gi|111023403|ref|YP_706375.1| ribonucleotide-diphosphate reducta... 489 2e-136
gi|296128314|ref|YP_003635564.1| Ribonucleoside-diphosphate redu... 488 4e-136
gi|296171158|ref|ZP_06852606.1| ribonucleotide-diphosphate reduc... 488 8e-136
gi|54026269|ref|YP_120511.1| ribonucleotide-diphosphate reductas... 486 2e-135
gi|118617484|ref|YP_905816.1| ribonucleotide-diphosphate reducta... 486 2e-135
gi|183981661|ref|YP_001849952.1| ribonucleoside-diphosphate redu... 486 2e-135
gi|240169547|ref|ZP_04748206.1| ribonucleoside-diphosphate reduc... 486 3e-135
gi|254776333|ref|ZP_05217849.1| ribonucleotide-diphosphate reduc... 486 3e-135
gi|339633056|ref|YP_004724698.1| ribonucleoside-diphosphate redu... 486 3e-135
gi|15842613|ref|NP_337650.1| ribonucleotide-diphosphate reductas... 485 4e-135
gi|41409193|ref|NP_962029.1| ribonucleotide-diphosphate reductas... 485 4e-135
gi|336459260|gb|EGO38205.1| ribonucleotide reductase, beta subun... 484 6e-135
gi|254820788|ref|ZP_05225789.1| ribonucleotide-diphosphate reduc... 484 7e-135
gi|118465359|ref|YP_883075.1| ribonucleotide-diphosphate reducta... 484 9e-135
gi|342858107|ref|ZP_08714762.1| ribonucleotide-diphosphate reduc... 483 2e-134
gi|226305840|ref|YP_002765800.1| ribonucleoside-diphosphate redu... 483 2e-134
gi|120403054|ref|YP_952883.1| ribonucleotide-diphosphate reducta... 482 3e-134
gi|118469232|ref|YP_886661.1| ribonucleotide-diphosphate reducta... 482 3e-134
gi|262203177|ref|YP_003274385.1| ribonucleoside-diphosphate redu... 482 3e-134
gi|315445193|ref|YP_004078072.1| ribonucleoside-diphosphate redu... 482 4e-134
gi|145224865|ref|YP_001135543.1| ribonucleotide-diphosphate redu... 481 5e-134
gi|289178104|gb|ADC85350.1| Ribonucleoside-diphosphate reductase... 481 5e-134
gi|15827930|ref|NP_302193.1| ribonucleotide-diphosphate reductas... 481 7e-134
gi|183601891|ref|ZP_02963260.1| ribonucleotide-diphosphate reduc... 481 8e-134
gi|334337743|ref|YP_004542895.1| ribonucleoside-diphosphate redu... 480 1e-133
gi|319948549|ref|ZP_08022680.1| ribonucleotide-diphosphate reduc... 480 1e-133
gi|343926904|ref|ZP_08766397.1| ribonucleoside-diphosphate reduc... 480 1e-133
gi|296140644|ref|YP_003647887.1| ribonucleoside-diphosphate redu... 479 3e-133
gi|229818600|ref|YP_002880126.1| Ribonucleoside-diphosphate redu... 479 4e-133
gi|333921308|ref|YP_004494889.1| ribonucleoside-diphosphate redu... 478 6e-133
gi|326381484|ref|ZP_08203178.1| Ribonucleoside-diphosphate reduc... 478 7e-133
gi|108798796|ref|YP_638993.1| ribonucleotide-diphosphate reducta... 476 2e-132
gi|239622882|ref|ZP_04665913.1| ribonucleoside-diphosphate reduc... 476 3e-132
gi|332671991|ref|YP_004454999.1| ribonucleoside-diphosphate redu... 476 3e-132
gi|336322017|ref|YP_004601985.1| ribonucleoside-diphosphate redu... 475 4e-132
gi|333991420|ref|YP_004524034.1| ribonucleoside-diphosphate redu... 475 4e-132
gi|311064961|ref|YP_003971687.1| ribonucleoside-diphosphate redu... 475 5e-132
gi|296455120|ref|YP_003662264.1| ribonucleoside-diphosphate redu... 474 5e-132
gi|310288088|ref|YP_003939347.1| ribonucleoside-diphosphate redu... 474 6e-132
>gi|15841457|ref|NP_336494.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
tuberculosis CDC1551]
gi|57116932|ref|YP_177853.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
tuberculosis H37Rv]
gi|148661790|ref|YP_001283313.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
tuberculosis H37Ra]
68 more sequence titles
Length=322
Score = 674 bits (1738), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 322/322 (100%), Positives = 322/322 (100%), Gaps = 0/322 (0%)
Query 1 MTGKLVERVHAINWNRLLDAKDLQVWERLTGNFWLPEKIPLSNDLASWQTLSSTEQQTTI 60
MTGKLVERVHAINWNRLLDAKDLQVWERLTGNFWLPEKIPLSNDLASWQTLSSTEQQTTI
Sbjct 1 MTGKLVERVHAINWNRLLDAKDLQVWERLTGNFWLPEKIPLSNDLASWQTLSSTEQQTTI 60
Query 61 RVFTGLTLLDTAQATVGAVAMIDDAVTPHEEAVLTNMAFMESVHAKSYSSIFSTLCSTKQ 120
RVFTGLTLLDTAQATVGAVAMIDDAVTPHEEAVLTNMAFMESVHAKSYSSIFSTLCSTKQ
Sbjct 61 RVFTGLTLLDTAQATVGAVAMIDDAVTPHEEAVLTNMAFMESVHAKSYSSIFSTLCSTKQ 120
Query 121 IDDAFDWSEQNPYLQRKAQIIVDYYRGDDALKRKASSVMLESFLFYSGFYLPMYWSSRGK 180
IDDAFDWSEQNPYLQRKAQIIVDYYRGDDALKRKASSVMLESFLFYSGFYLPMYWSSRGK
Sbjct 121 IDDAFDWSEQNPYLQRKAQIIVDYYRGDDALKRKASSVMLESFLFYSGFYLPMYWSSRGK 180
Query 181 LTNTADLIRLIIRDEAVHGYYIGYKCQRGLADLTDAERADHREYTCELLHTLYANEIDYA 240
LTNTADLIRLIIRDEAVHGYYIGYKCQRGLADLTDAERADHREYTCELLHTLYANEIDYA
Sbjct 181 LTNTADLIRLIIRDEAVHGYYIGYKCQRGLADLTDAERADHREYTCELLHTLYANEIDYA 240
Query 241 HDLYDELGWTDDVLPYMRYNANKALANLGYQPAFDRDTCQVNPAVRAALDPGAGENHDFF 300
HDLYDELGWTDDVLPYMRYNANKALANLGYQPAFDRDTCQVNPAVRAALDPGAGENHDFF
Sbjct 241 HDLYDELGWTDDVLPYMRYNANKALANLGYQPAFDRDTCQVNPAVRAALDPGAGENHDFF 300
Query 301 SGSGSSYVMGTHQPTTDTDWDF 322
SGSGSSYVMGTHQPTTDTDWDF
Sbjct 301 SGSGSSYVMGTHQPTTDTDWDF 322
>gi|31793160|ref|NP_855653.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
bovis AF2122/97]
gi|224990358|ref|YP_002645045.1| ribonucleoside-diphosphate reductase subunit beta [Mycobacterium
bovis BCG str. Tokyo 172]
gi|289574653|ref|ZP_06454880.1| ribonucleoside-diphosphate reductase subunit beta nrdF1 [Mycobacterium
tuberculosis K85]
6 more sequence titles
gi|339632019|ref|YP_004723661.1| ribonucleoside-diphosphate reductase subunit beta [Mycobacterium
africanum GM041182]
gi|31618751|emb|CAD94705.1| RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE (BETA CHAIN) NRDF1 (RIBONUCLEOTIDE
REDUCTASE SMALL SUBUNIT) (R2F PROTEIN) [Mycobacterium
bovis AF2122/97]
gi|224773471|dbj|BAH26277.1| ribonucleoside-diphosphate reductase subunit beta [Mycobacterium
bovis BCG str. Tokyo 172]
gi|289539084|gb|EFD43662.1| ribonucleoside-diphosphate reductase subunit beta nrdF1 [Mycobacterium
tuberculosis K85]
gi|339331375|emb|CCC27062.1| ribonucleoside-diphosphate reductase (beta chain) NRDF1 (ribonucleotide
reductase small subunit) [Mycobacterium africanum
GM041182]
gi|341601901|emb|CCC64575.1| RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE (BETA CHAIN) NRDF1 (RIBONUCLEOTIDE
REDUCTASE SMALL SUBUNIT) (R2F PROTEIN) [Mycobacterium
bovis BCG str. Moreau RDJ]
Length=322
Score = 671 bits (1732), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 321/322 (99%), Positives = 321/322 (99%), Gaps = 0/322 (0%)
Query 1 MTGKLVERVHAINWNRLLDAKDLQVWERLTGNFWLPEKIPLSNDLASWQTLSSTEQQTTI 60
MTGK VERVHAINWNRLLDAKDLQVWERLTGNFWLPEKIPLSNDLASWQTLSSTEQQTTI
Sbjct 1 MTGKRVERVHAINWNRLLDAKDLQVWERLTGNFWLPEKIPLSNDLASWQTLSSTEQQTTI 60
Query 61 RVFTGLTLLDTAQATVGAVAMIDDAVTPHEEAVLTNMAFMESVHAKSYSSIFSTLCSTKQ 120
RVFTGLTLLDTAQATVGAVAMIDDAVTPHEEAVLTNMAFMESVHAKSYSSIFSTLCSTKQ
Sbjct 61 RVFTGLTLLDTAQATVGAVAMIDDAVTPHEEAVLTNMAFMESVHAKSYSSIFSTLCSTKQ 120
Query 121 IDDAFDWSEQNPYLQRKAQIIVDYYRGDDALKRKASSVMLESFLFYSGFYLPMYWSSRGK 180
IDDAFDWSEQNPYLQRKAQIIVDYYRGDDALKRKASSVMLESFLFYSGFYLPMYWSSRGK
Sbjct 121 IDDAFDWSEQNPYLQRKAQIIVDYYRGDDALKRKASSVMLESFLFYSGFYLPMYWSSRGK 180
Query 181 LTNTADLIRLIIRDEAVHGYYIGYKCQRGLADLTDAERADHREYTCELLHTLYANEIDYA 240
LTNTADLIRLIIRDEAVHGYYIGYKCQRGLADLTDAERADHREYTCELLHTLYANEIDYA
Sbjct 181 LTNTADLIRLIIRDEAVHGYYIGYKCQRGLADLTDAERADHREYTCELLHTLYANEIDYA 240
Query 241 HDLYDELGWTDDVLPYMRYNANKALANLGYQPAFDRDTCQVNPAVRAALDPGAGENHDFF 300
HDLYDELGWTDDVLPYMRYNANKALANLGYQPAFDRDTCQVNPAVRAALDPGAGENHDFF
Sbjct 241 HDLYDELGWTDDVLPYMRYNANKALANLGYQPAFDRDTCQVNPAVRAALDPGAGENHDFF 300
Query 301 SGSGSSYVMGTHQPTTDTDWDF 322
SGSGSSYVMGTHQPTTDTDWDF
Sbjct 301 SGSGSSYVMGTHQPTTDTDWDF 322
>gi|340626994|ref|YP_004745446.1| ribonucleoside-diphosphate reductase subunit beta NRDF1 [Mycobacterium
canettii CIPT 140010059]
gi|340005184|emb|CCC44333.1| ribonucleoside-diphosphate reductase (beta chain) NRDF1 (ribonucleotide
reductase small subunit) (R2F protein) [Mycobacterium
canettii CIPT 140010059]
Length=322
Score = 669 bits (1726), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 321/322 (99%), Positives = 321/322 (99%), Gaps = 0/322 (0%)
Query 1 MTGKLVERVHAINWNRLLDAKDLQVWERLTGNFWLPEKIPLSNDLASWQTLSSTEQQTTI 60
MTGKLVERVHAINWNRLLDAKDLQVWERLTGNFWLPEKIPLSNDLASWQTLSSTEQQTTI
Sbjct 1 MTGKLVERVHAINWNRLLDAKDLQVWERLTGNFWLPEKIPLSNDLASWQTLSSTEQQTTI 60
Query 61 RVFTGLTLLDTAQATVGAVAMIDDAVTPHEEAVLTNMAFMESVHAKSYSSIFSTLCSTKQ 120
RVFTGLTLLDTAQATVGAVAMIDDAVTPHEEAVLTNMAFMESVHAKSYSSIFSTLCSTKQ
Sbjct 61 RVFTGLTLLDTAQATVGAVAMIDDAVTPHEEAVLTNMAFMESVHAKSYSSIFSTLCSTKQ 120
Query 121 IDDAFDWSEQNPYLQRKAQIIVDYYRGDDALKRKASSVMLESFLFYSGFYLPMYWSSRGK 180
IDDAFDWSEQNPYLQRKAQIIVDYYRGDDALKRKASSVMLESFLFYSGFYLPMYWSSRGK
Sbjct 121 IDDAFDWSEQNPYLQRKAQIIVDYYRGDDALKRKASSVMLESFLFYSGFYLPMYWSSRGK 180
Query 181 LTNTADLIRLIIRDEAVHGYYIGYKCQRGLADLTDAERADHREYTCELLHTLYANEIDYA 240
LTNTADLIRLIIRDEAVHGYYIGYKCQRGLADLTDAERADHREYT ELLHTLYANEIDYA
Sbjct 181 LTNTADLIRLIIRDEAVHGYYIGYKCQRGLADLTDAERADHREYTYELLHTLYANEIDYA 240
Query 241 HDLYDELGWTDDVLPYMRYNANKALANLGYQPAFDRDTCQVNPAVRAALDPGAGENHDFF 300
HDLYDELGWTDDVLPYMRYNANKALANLGYQPAFDRDTCQVNPAVRAALDPGAGENHDFF
Sbjct 241 HDLYDELGWTDDVLPYMRYNANKALANLGYQPAFDRDTCQVNPAVRAALDPGAGENHDFF 300
Query 301 SGSGSSYVMGTHQPTTDTDWDF 322
SGSGSSYVMGTHQPTTDTDWDF
Sbjct 301 SGSGSSYVMGTHQPTTDTDWDF 322
>gi|1395207|gb|AAB81405.1| ribonucleotide reductase R2-1 small subunit [Mycobacterium tuberculosis
str. Erdman]
Length=321
Score = 660 bits (1702), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 317/322 (99%), Positives = 319/322 (99%), Gaps = 1/322 (0%)
Query 1 MTGKLVERVHAINWNRLLDAKDLQVWERLTGNFWLPEKIPLSNDLASWQTLSSTEQQTTI 60
MTGKLVERVHAINWNRLLDAKDLQVWERLTGNFWLPEKIPLSNDLASWQTLSSTEQQTTI
Sbjct 1 MTGKLVERVHAINWNRLLDAKDLQVWERLTGNFWLPEKIPLSNDLASWQTLSSTEQQTTI 60
Query 61 RVFTGLTLLDTAQATVGAVAMIDDAVTPHEEAVLTNMAFMESVHAKSYSSIFSTLCSTKQ 120
RVFTGLTLLDTAQATVGAVAMIDDAVTPHEEAVLTNMAFMESVHAKSYSSIFSTLCSTKQ
Sbjct 61 RVFTGLTLLDTAQATVGAVAMIDDAVTPHEEAVLTNMAFMESVHAKSYSSIFSTLCSTKQ 120
Query 121 IDDAFDWSEQNPYLQRKAQIIVDYYRGDDALKRKASSVMLESFLFYSGFYLPMYWSSRGK 180
IDDAFDWSEQNPYLQRKAQIIVDYYRGDDA ++ SSVMLESFLFYSGFYLPMYWSSRGK
Sbjct 121 IDDAFDWSEQNPYLQRKAQIIVDYYRGDDAQAQR-SSVMLESFLFYSGFYLPMYWSSRGK 179
Query 181 LTNTADLIRLIIRDEAVHGYYIGYKCQRGLADLTDAERADHREYTCELLHTLYANEIDYA 240
LTNTADLIRLIIRDEAVHGYYIGYKCQRGLADLTDAERADHREYTCELLHTLYANEIDYA
Sbjct 180 LTNTADLIRLIIRDEAVHGYYIGYKCQRGLADLTDAERADHREYTCELLHTLYANEIDYA 239
Query 241 HDLYDELGWTDDVLPYMRYNANKALANLGYQPAFDRDTCQVNPAVRAALDPGAGENHDFF 300
HDLYDELGWTDDVLPYMRYNANKALANLGYQPAFDRDTCQVNPAVRAALDPGAGENHDFF
Sbjct 240 HDLYDELGWTDDVLPYMRYNANKALANLGYQPAFDRDTCQVNPAVRAALDPGAGENHDFF 299
Query 301 SGSGSSYVMGTHQPTTDTDWDF 322
SGSGSSYVMGTHQPTTDTDWDF
Sbjct 300 SGSGSSYVMGTHQPTTDTDWDF 321
>gi|254819781|ref|ZP_05224782.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
intracellulare ATCC 13950]
Length=322
Score = 572 bits (1473), Expect = 4e-161, Method: Compositional matrix adjust.
Identities = 266/322 (83%), Positives = 297/322 (93%), Gaps = 0/322 (0%)
Query 1 MTGKLVERVHAINWNRLLDAKDLQVWERLTGNFWLPEKIPLSNDLASWQTLSSTEQQTTI 60
M+ + V+R+ A+NWNRL D KD QVW+RLTGNFWLPEK+PLSND ASWQTL++ EQQTT+
Sbjct 1 MSIRSVDRMRAVNWNRLPDPKDAQVWDRLTGNFWLPEKVPLSNDSASWQTLTAQEQQTTV 60
Query 61 RVFTGLTLLDTAQATVGAVAMIDDAVTPHEEAVLTNMAFMESVHAKSYSSIFSTLCSTKQ 120
RVFTGLTLLDT QATVGAV+MI DAVTPHEEAVLTN+AFMESVHAKSYSSIFSTLCST+Q
Sbjct 61 RVFTGLTLLDTTQATVGAVSMIADAVTPHEEAVLTNIAFMESVHAKSYSSIFSTLCSTRQ 120
Query 121 IDDAFDWSEQNPYLQRKAQIIVDYYRGDDALKRKASSVMLESFLFYSGFYLPMYWSSRGK 180
IDDAFDWSE+NP+LQRKAQI+VDYYRGDDALKRKA+SVMLESFLFYSGFYLPMYWSSRGK
Sbjct 121 IDDAFDWSERNPHLQRKAQIVVDYYRGDDALKRKAASVMLESFLFYSGFYLPMYWSSRGK 180
Query 181 LTNTADLIRLIIRDEAVHGYYIGYKCQRGLADLTDAERADHREYTCELLHTLYANEIDYA 240
LTNTAD+IRLIIRDEAVHG+YIGYKCQRGLA+L++ ER+ HREYT ELL+ LY NEIDYA
Sbjct 181 LTNTADIIRLIIRDEAVHGFYIGYKCQRGLAELSEPERSGHREYTYELLNALYTNEIDYA 240
Query 241 HDLYDELGWTDDVLPYMRYNANKALANLGYQPAFDRDTCQVNPAVRAALDPGAGENHDFF 300
HDLYD LGWTDDVLPYMR+NAN+ALANLGY+P F C+VNPAV +ALDPGAGENHDFF
Sbjct 241 HDLYDGLGWTDDVLPYMRFNANRALANLGYEPMFGPSDCRVNPAVLSALDPGAGENHDFF 300
Query 301 SGSGSSYVMGTHQPTTDTDWDF 322
SGSGSSYV+G+HQ T D DWDF
Sbjct 301 SGSGSSYVIGSHQATEDADWDF 322
>gi|325677552|ref|ZP_08157215.1| ribonucleotide-diphosphate reductase subunit beta [Rhodococcus
equi ATCC 33707]
gi|325551623|gb|EGD21322.1| ribonucleotide-diphosphate reductase subunit beta [Rhodococcus
equi ATCC 33707]
Length=322
Score = 542 bits (1397), Expect = 2e-152, Method: Compositional matrix adjust.
Identities = 254/322 (79%), Positives = 285/322 (89%), Gaps = 0/322 (0%)
Query 1 MTGKLVERVHAINWNRLLDAKDLQVWERLTGNFWLPEKIPLSNDLASWQTLSSTEQQTTI 60
M+ +LV+RVHAINWNR+ D KD +VW+RLTGNFWLPEKIPLSNDLASW TL+ TE++ TI
Sbjct 1 MSDRLVDRVHAINWNRVPDPKDAEVWDRLTGNFWLPEKIPLSNDLASWATLTDTEREMTI 60
Query 61 RVFTGLTLLDTAQATVGAVAMIDDAVTPHEEAVLTNMAFMESVHAKSYSSIFSTLCSTKQ 120
RVFTGLTLLDTAQATVGAVAMI DAVTPHEEAVLTNMAFMESVHAKSYSSIFSTLCST+Q
Sbjct 61 RVFTGLTLLDTAQATVGAVAMIADAVTPHEEAVLTNMAFMESVHAKSYSSIFSTLCSTRQ 120
Query 121 IDDAFDWSEQNPYLQRKAQIIVDYYRGDDALKRKASSVMLESFLFYSGFYLPMYWSSRGK 180
ID AF+WSE+NP+LQRKAQI+VDYYRGDDAL RKA+SVMLESFLFYSGFYLPMYW+S GK
Sbjct 121 IDAAFEWSERNPHLQRKAQIVVDYYRGDDALARKAASVMLESFLFYSGFYLPMYWASHGK 180
Query 181 LTNTADLIRLIIRDEAVHGYYIGYKCQRGLADLTDAERADHREYTCELLHTLYANEIDYA 240
LTNTADLIRLIIRDEAVHGYYIGYKC++ L L + R HR YT LL TLYANE+ YA
Sbjct 181 LTNTADLIRLIIRDEAVHGYYIGYKCRKALERLDASARDAHRRYTYALLETLYANEVAYA 240
Query 241 HDLYDELGWTDDVLPYMRYNANKALANLGYQPAFDRDTCQVNPAVRAALDPGAGENHDFF 300
DLYDE+GWT +V+ YMR+NANKALANLGY+P F CQVNPA+ +ALDPGAGENHDFF
Sbjct 241 ADLYDEVGWTAEVVSYMRFNANKALANLGYEPMFRASECQVNPAILSALDPGAGENHDFF 300
Query 301 SGSGSSYVMGTHQPTTDTDWDF 322
SGSGS+YV+G +PT D DW+F
Sbjct 301 SGSGSAYVIGKQKPTEDVDWNF 322
>gi|312137650|ref|YP_004004986.1| ribonucleoside-diphosphate reductase beta subunit nrdf [Rhodococcus
equi 103S]
gi|311886989|emb|CBH46298.1| ribonucleoside-diphosphate reductase beta subunit NrdF [Rhodococcus
equi 103S]
Length=322
Score = 541 bits (1394), Expect = 5e-152, Method: Compositional matrix adjust.
Identities = 253/322 (79%), Positives = 286/322 (89%), Gaps = 0/322 (0%)
Query 1 MTGKLVERVHAINWNRLLDAKDLQVWERLTGNFWLPEKIPLSNDLASWQTLSSTEQQTTI 60
M+ +LV+RVHAINWNR+ D KD +VW+RLTGNFWLPEKIPLSNDLASW TL+ TE++ TI
Sbjct 1 MSDRLVDRVHAINWNRVPDPKDAEVWDRLTGNFWLPEKIPLSNDLASWATLTDTEREMTI 60
Query 61 RVFTGLTLLDTAQATVGAVAMIDDAVTPHEEAVLTNMAFMESVHAKSYSSIFSTLCSTKQ 120
RVFTGLTLLDTAQATVGAVAMI DAVTPHEEAVLTNMAFMESVHAKSYSSIFSTLCST+Q
Sbjct 61 RVFTGLTLLDTAQATVGAVAMIADAVTPHEEAVLTNMAFMESVHAKSYSSIFSTLCSTRQ 120
Query 121 IDDAFDWSEQNPYLQRKAQIIVDYYRGDDALKRKASSVMLESFLFYSGFYLPMYWSSRGK 180
ID AF+WSE+NP+LQRKAQI+VDYYRGDDAL RKA+SVMLESFLFYSGFYLPMYW+S G+
Sbjct 121 IDAAFEWSERNPHLQRKAQIVVDYYRGDDALARKAASVMLESFLFYSGFYLPMYWASHGE 180
Query 181 LTNTADLIRLIIRDEAVHGYYIGYKCQRGLADLTDAERADHREYTCELLHTLYANEIDYA 240
LTNTADLIRLIIRDEAVHGYYIGYKC++ L L + R HR YT +LL TLYANE+ YA
Sbjct 181 LTNTADLIRLIIRDEAVHGYYIGYKCRKALERLDASARDAHRRYTYDLLETLYANEVAYA 240
Query 241 HDLYDELGWTDDVLPYMRYNANKALANLGYQPAFDRDTCQVNPAVRAALDPGAGENHDFF 300
DLYDE+GWT +V+ YMR+NANKALANLGY+P F CQVNPA+ +ALDPGAGENHDFF
Sbjct 241 ADLYDEVGWTAEVVSYMRFNANKALANLGYEPMFPVSECQVNPAILSALDPGAGENHDFF 300
Query 301 SGSGSSYVMGTHQPTTDTDWDF 322
SGSGS+YV+G +PT D DW+F
Sbjct 301 SGSGSAYVIGKQKPTEDVDWNF 322
>gi|325675841|ref|ZP_08155525.1| ribonucleotide-diphosphate reductase subunit beta [Rhodococcus
equi ATCC 33707]
gi|325553812|gb|EGD23490.1| ribonucleotide-diphosphate reductase subunit beta [Rhodococcus
equi ATCC 33707]
Length=335
Score = 492 bits (1266), Expect = 3e-137, Method: Compositional matrix adjust.
Identities = 230/319 (73%), Positives = 268/319 (85%), Gaps = 0/319 (0%)
Query 4 KLVERVHAINWNRLLDAKDLQVWERLTGNFWLPEKIPLSNDLASWQTLSSTEQQTTIRVF 63
KLV+RV AINWNR+ D KD +VW+RLTGNFWLPEK+P+SND+ SW TL+ EQQ T+RVF
Sbjct 17 KLVDRVSAINWNRVPDEKDSEVWDRLTGNFWLPEKVPVSNDIQSWATLTPNEQQLTMRVF 76
Query 64 TGLTLLDTAQATVGAVAMIDDAVTPHEEAVLTNMAFMESVHAKSYSSIFSTLCSTKQIDD 123
TGLTLLDT Q TVGAV++I DAVTPHEEAVLTN+AFMESVHAKSYS IFSTLC+T++IDD
Sbjct 77 TGLTLLDTIQGTVGAVSLIPDAVTPHEEAVLTNIAFMESVHAKSYSQIFSTLCTTREIDD 136
Query 124 AFDWSEQNPYLQRKAQIIVDYYRGDDALKRKASSVMLESFLFYSGFYLPMYWSSRGKLTN 183
AF WSE+NP LQRKAQI++DYY+GDD LKRK +S +LESFLFYSGFYLPMYW+SR KLTN
Sbjct 137 AFRWSEENPNLQRKAQIVLDYYKGDDPLKRKVASTLLESFLFYSGFYLPMYWASRAKLTN 196
Query 184 TADLIRLIIRDEAVHGYYIGYKCQRGLADLTDAERADHREYTCELLHTLYANEIDYAHDL 243
TAD+IRLIIRDEAVHGYYIGYK QRGL +T+AER + + YT ELL LY NE++Y DL
Sbjct 197 TADVIRLIIRDEAVHGYYIGYKYQRGLERVTEAEREELKNYTFELLFELYDNEVEYTQDL 256
Query 244 YDELGWTDDVLPYMRYNANKALANLGYQPAFDRDTCQVNPAVRAALDPGAGENHDFFSGS 303
YDE+G T+DV ++RYNANKAL NLGY+ F +D VNPA+ +AL P A ENHDFFSGS
Sbjct 257 YDEVGLTEDVKKFLRYNANKALMNLGYEGLFPKDETDVNPAILSALSPNADENHDFFSGS 316
Query 304 GSSYVMGTHQPTTDTDWDF 322
GSSYV+G T D DWDF
Sbjct 317 GSSYVIGKAVNTEDDDWDF 335
>gi|312140539|ref|YP_004007875.1| ribonucleoside-diphosphate reductase nrdf [Rhodococcus equi 103S]
gi|311889878|emb|CBH49195.1| ribonucleoside-diphosphate reductase NrdF [Rhodococcus equi 103S]
Length=329
Score = 492 bits (1266), Expect = 4e-137, Method: Compositional matrix adjust.
Identities = 230/319 (73%), Positives = 268/319 (85%), Gaps = 0/319 (0%)
Query 4 KLVERVHAINWNRLLDAKDLQVWERLTGNFWLPEKIPLSNDLASWQTLSSTEQQTTIRVF 63
KLV+RV AINWNR+ D KD +VW+RLTGNFWLPEK+P+SND+ SW TL+ EQQ T+RVF
Sbjct 11 KLVDRVSAINWNRVPDEKDSEVWDRLTGNFWLPEKVPVSNDIQSWATLTPNEQQLTMRVF 70
Query 64 TGLTLLDTAQATVGAVAMIDDAVTPHEEAVLTNMAFMESVHAKSYSSIFSTLCSTKQIDD 123
TGLTLLDT Q TVGAV++I DAVTPHEEAVLTN+AFMESVHAKSYS IFSTLC+T++IDD
Sbjct 71 TGLTLLDTIQGTVGAVSLIPDAVTPHEEAVLTNIAFMESVHAKSYSQIFSTLCTTREIDD 130
Query 124 AFDWSEQNPYLQRKAQIIVDYYRGDDALKRKASSVMLESFLFYSGFYLPMYWSSRGKLTN 183
AF WSE+NP LQRKAQI++DYY+GDD LKRK +S +LESFLFYSGFYLPMYW+SR KLTN
Sbjct 131 AFRWSEENPNLQRKAQIVLDYYKGDDPLKRKVASTLLESFLFYSGFYLPMYWASRAKLTN 190
Query 184 TADLIRLIIRDEAVHGYYIGYKCQRGLADLTDAERADHREYTCELLHTLYANEIDYAHDL 243
TAD+IRLIIRDEAVHGYYIGYK QRGL +T+AER + + YT ELL LY NE++Y DL
Sbjct 191 TADVIRLIIRDEAVHGYYIGYKYQRGLERVTEAEREELKNYTFELLFELYDNEVEYTQDL 250
Query 244 YDELGWTDDVLPYMRYNANKALANLGYQPAFDRDTCQVNPAVRAALDPGAGENHDFFSGS 303
YDE+G T+DV ++RYNANKAL NLGY+ F +D VNPA+ +AL P A ENHDFFSGS
Sbjct 251 YDEVGLTEDVKKFLRYNANKALMNLGYEGLFPKDETDVNPAILSALSPNADENHDFFSGS 310
Query 304 GSSYVMGTHQPTTDTDWDF 322
GSSYV+G T D DWDF
Sbjct 311 GSSYVIGKAVNTEDDDWDF 329
>gi|226365904|ref|YP_002783687.1| ribonucleotide-diphosphate reductase subunit beta [Rhodococcus
opacus B4]
gi|226244394|dbj|BAH54742.1| ribonucleoside-diphosphate reductase beta chain [Rhodococcus
opacus B4]
Length=321
Score = 490 bits (1261), Expect = 1e-136, Method: Compositional matrix adjust.
Identities = 230/319 (73%), Positives = 266/319 (84%), Gaps = 0/319 (0%)
Query 4 KLVERVHAINWNRLLDAKDLQVWERLTGNFWLPEKIPLSNDLASWQTLSSTEQQTTIRVF 63
KLV RV AINWNR+ D KD +VW+RL GNFWLPEK+P+SND+ SW TL++ E+Q T+RVF
Sbjct 3 KLVSRVSAINWNRVQDEKDAEVWDRLVGNFWLPEKVPVSNDIPSWGTLTAQEKQLTMRVF 62
Query 64 TGLTLLDTAQATVGAVAMIDDAVTPHEEAVLTNMAFMESVHAKSYSSIFSTLCSTKQIDD 123
TGLTLLDT Q TVGAV++I DA+TPHEEAV TN+AFMESVHAKSYSSIFSTLCST+ IDD
Sbjct 63 TGLTLLDTIQGTVGAVSLIPDAITPHEEAVYTNIAFMESVHAKSYSSIFSTLCSTRDIDD 122
Query 124 AFDWSEQNPYLQRKAQIIVDYYRGDDALKRKASSVMLESFLFYSGFYLPMYWSSRGKLTN 183
AF WSE+NP LQRKA+I++DYY+GD+ LKRK +S +LESFLFYSGFYLPMYWSSR KLTN
Sbjct 123 AFRWSEENPNLQRKAEIVMDYYQGDEPLKRKVASTLLESFLFYSGFYLPMYWSSRAKLTN 182
Query 184 TADLIRLIIRDEAVHGYYIGYKCQRGLADLTDAERADHREYTCELLHTLYANEIDYAHDL 243
TADLIRLIIRDEAVHGYYIGYK Q+GL LT+AER D + YT ELL LY NE+DY DL
Sbjct 183 TADLIRLIIRDEAVHGYYIGYKYQKGLEQLTEAERDDLKNYTFELLFELYDNEVDYTQDL 242
Query 244 YDELGWTDDVLPYMRYNANKALANLGYQPAFDRDTCQVNPAVRAALDPGAGENHDFFSGS 303
YDE+G T+DV ++RYNANKAL NLGY+ F +D VNPA+ +AL P A ENHDFFSGS
Sbjct 243 YDEVGLTEDVKKFLRYNANKALMNLGYEGLFPKDETDVNPAILSALSPNADENHDFFSGS 302
Query 304 GSSYVMGTHQPTTDTDWDF 322
GSSYV+G T D DWDF
Sbjct 303 GSSYVIGKAVNTEDEDWDF 321
>gi|169630485|ref|YP_001704134.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
abscessus ATCC 19977]
gi|169242452|emb|CAM63480.1| Probable ribonucleoside-diphosphate reductase beta subunit [Mycobacterium
abscessus]
Length=324
Score = 489 bits (1260), Expect = 2e-136, Method: Compositional matrix adjust.
Identities = 228/319 (72%), Positives = 268/319 (85%), Gaps = 0/319 (0%)
Query 4 KLVERVHAINWNRLLDAKDLQVWERLTGNFWLPEKIPLSNDLASWQTLSSTEQQTTIRVF 63
KLV RV AINWNR+ D KD +VW+RLTGNFWLPEK+P+SND+ SW TL+ E+Q T+RVF
Sbjct 6 KLVSRVSAINWNRVPDEKDAEVWDRLTGNFWLPEKVPVSNDIQSWNTLTDHEKQLTMRVF 65
Query 64 TGLTLLDTAQATVGAVAMIDDAVTPHEEAVLTNMAFMESVHAKSYSSIFSTLCSTKQIDD 123
TGLTLLDT Q TVGAV++I DA+TPHEEAV TN+AFMESVHAKSYSSIFSTLCST++IDD
Sbjct 66 TGLTLLDTIQGTVGAVSLIPDAITPHEEAVYTNIAFMESVHAKSYSSIFSTLCSTREIDD 125
Query 124 AFDWSEQNPYLQRKAQIIVDYYRGDDALKRKASSVMLESFLFYSGFYLPMYWSSRGKLTN 183
AF WSE+NP LQRKA+I+++YYRGD+ LKRK +S +LESFLFYSGFYLPMYWSSR KLTN
Sbjct 126 AFRWSEENPNLQRKAEIVMEYYRGDEPLKRKVASTLLESFLFYSGFYLPMYWSSRAKLTN 185
Query 184 TADLIRLIIRDEAVHGYYIGYKCQRGLADLTDAERADHREYTCELLHTLYANEIDYAHDL 243
TAD+IRLIIRDEAVHGYYIGYK QRGL + +A+RA+ +EYT +LL+ LY NE DY DL
Sbjct 186 TADMIRLIIRDEAVHGYYIGYKFQRGLERVDEAKRAEIKEYTYDLLYELYENETDYTEDL 245
Query 244 YDELGWTDDVLPYMRYNANKALANLGYQPAFDRDTCQVNPAVRAALDPGAGENHDFFSGS 303
YDE+G T+DV ++RYNANKAL NLGY+ F R+ VNPA+ +AL P A ENHDFFSGS
Sbjct 246 YDEVGLTEDVKKFLRYNANKALMNLGYEALFPREETDVNPAILSALSPNADENHDFFSGS 305
Query 304 GSSYVMGTHQPTTDTDWDF 322
GSSYV+G T D DWDF
Sbjct 306 GSSYVIGKAVNTEDEDWDF 324
>gi|111023403|ref|YP_706375.1| ribonucleotide-diphosphate reductase subunit beta [Rhodococcus
jostii RHA1]
gi|110822933|gb|ABG98217.1| ribonucleotide reductase [Rhodococcus jostii RHA1]
Length=321
Score = 489 bits (1259), Expect = 2e-136, Method: Compositional matrix adjust.
Identities = 230/319 (73%), Positives = 265/319 (84%), Gaps = 0/319 (0%)
Query 4 KLVERVHAINWNRLLDAKDLQVWERLTGNFWLPEKIPLSNDLASWQTLSSTEQQTTIRVF 63
KLV RV AINWNR+ D KD +VW+RL GNFWLPEK+P+SND+ SW TL+ E+Q T+RVF
Sbjct 3 KLVSRVSAINWNRVQDEKDAEVWDRLVGNFWLPEKVPVSNDIPSWGTLTPQEKQLTMRVF 62
Query 64 TGLTLLDTAQATVGAVAMIDDAVTPHEEAVLTNMAFMESVHAKSYSSIFSTLCSTKQIDD 123
TGLTLLDT Q TVGAV++I DA+TPHEEAV TN+AFMESVHAKSYSSIFSTLCST+ IDD
Sbjct 63 TGLTLLDTIQGTVGAVSLIPDAITPHEEAVYTNIAFMESVHAKSYSSIFSTLCSTRDIDD 122
Query 124 AFDWSEQNPYLQRKAQIIVDYYRGDDALKRKASSVMLESFLFYSGFYLPMYWSSRGKLTN 183
AF WSE+NP LQRKA+I++DYY+GD+ LKRK +S +LESFLFYSGFYLPMYWSSR KLTN
Sbjct 123 AFRWSEENPNLQRKAEIVMDYYQGDEPLKRKVASTLLESFLFYSGFYLPMYWSSRAKLTN 182
Query 184 TADLIRLIIRDEAVHGYYIGYKCQRGLADLTDAERADHREYTCELLHTLYANEIDYAHDL 243
TADLIRLIIRDEAVHGYYIGYK Q+GL LT+AER D + YT ELL LY NE+DY DL
Sbjct 183 TADLIRLIIRDEAVHGYYIGYKYQKGLEQLTEAERDDLKNYTFELLFELYDNEVDYTQDL 242
Query 244 YDELGWTDDVLPYMRYNANKALANLGYQPAFDRDTCQVNPAVRAALDPGAGENHDFFSGS 303
YDE+G T+DV ++RYNANKAL NLGY+ F +D VNPA+ +AL P A ENHDFFSGS
Sbjct 243 YDEVGLTEDVKKFLRYNANKALMNLGYEGLFPKDETDVNPAILSALSPNADENHDFFSGS 302
Query 304 GSSYVMGTHQPTTDTDWDF 322
GSSYV+G T D DWDF
Sbjct 303 GSSYVIGKAVNTEDEDWDF 321
>gi|296128314|ref|YP_003635564.1| Ribonucleoside-diphosphate reductase [Cellulomonas flavigena
DSM 20109]
gi|296020129|gb|ADG73365.1| Ribonucleoside-diphosphate reductase [Cellulomonas flavigena
DSM 20109]
Length=326
Score = 488 bits (1257), Expect = 4e-136, Method: Compositional matrix adjust.
Identities = 230/319 (73%), Positives = 265/319 (84%), Gaps = 0/319 (0%)
Query 4 KLVERVHAINWNRLLDAKDLQVWERLTGNFWLPEKIPLSNDLASWQTLSSTEQQTTIRVF 63
KLV+RV AINWNRL D KDL+VW+RL GNFWLPEK+P+SND+ SW TL+ E+ T RVF
Sbjct 8 KLVDRVSAINWNRLQDEKDLEVWDRLVGNFWLPEKVPVSNDIQSWATLTEAEKTMTTRVF 67
Query 64 TGLTLLDTAQATVGAVAMIDDAVTPHEEAVLTNMAFMESVHAKSYSSIFSTLCSTKQIDD 123
TGLTLLDT Q TVGAV++I DA+TPHEEAV TN+AFMESVHAKSYSSIFSTL STK+ID+
Sbjct 68 TGLTLLDTIQGTVGAVSLIPDALTPHEEAVYTNIAFMESVHAKSYSSIFSTLISTKEIDE 127
Query 124 AFDWSEQNPYLQRKAQIIVDYYRGDDALKRKASSVMLESFLFYSGFYLPMYWSSRGKLTN 183
AF WSE+NP LQRKA+I++DYYRGDD LKRK +S MLESFLFYSGFY PMYW+SR KLTN
Sbjct 128 AFRWSEENPNLQRKAEIVLDYYRGDDPLKRKVASTMLESFLFYSGFYAPMYWASRAKLTN 187
Query 184 TADLIRLIIRDEAVHGYYIGYKCQRGLADLTDAERADHREYTCELLHTLYANEIDYAHDL 243
TADLIRLIIRDEAVHGYYIGYK Q+GL +++AERA+ ++YT LL LY NE++Y DL
Sbjct 188 TADLIRLIIRDEAVHGYYIGYKFQKGLERVSEAERAELKDYTFNLLFELYDNEVEYTQDL 247
Query 244 YDELGWTDDVLPYMRYNANKALANLGYQPAFDRDTCQVNPAVRAALDPGAGENHDFFSGS 303
YDELG T+DV ++RYNANKAL NLGY+ F RD VNPA+ AAL P A ENHDFFSGS
Sbjct 248 YDELGLTEDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILAALSPNADENHDFFSGS 307
Query 304 GSSYVMGTHQPTTDTDWDF 322
GSSYV+G T D DWDF
Sbjct 308 GSSYVIGKAVNTEDDDWDF 326
>gi|296171158|ref|ZP_06852606.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
parascrofulaceum ATCC BAA-614]
gi|295894294|gb|EFG74049.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
parascrofulaceum ATCC BAA-614]
Length=324
Score = 488 bits (1255), Expect = 8e-136, Method: Compositional matrix adjust.
Identities = 228/319 (72%), Positives = 269/319 (85%), Gaps = 0/319 (0%)
Query 4 KLVERVHAINWNRLLDAKDLQVWERLTGNFWLPEKIPLSNDLASWQTLSSTEQQTTIRVF 63
KL++RV AINWNRL D KD +VW+RLTGNFWLPEK+P+SNDL SW TL+S E+Q T+RVF
Sbjct 6 KLIDRVSAINWNRLQDEKDAEVWDRLTGNFWLPEKVPVSNDLPSWATLTSGEKQLTMRVF 65
Query 64 TGLTLLDTAQATVGAVAMIDDAVTPHEEAVLTNMAFMESVHAKSYSSIFSTLCSTKQIDD 123
TGLTLLDT Q TVGAV++I DA+TPHEEAV TN+AFMESVHA+SYS+IFSTLCST +IDD
Sbjct 66 TGLTLLDTIQGTVGAVSLIPDALTPHEEAVYTNIAFMESVHARSYSNIFSTLCSTAEIDD 125
Query 124 AFDWSEQNPYLQRKAQIIVDYYRGDDALKRKASSVMLESFLFYSGFYLPMYWSSRGKLTN 183
AF WSE+NP LQRKA+I++ YY+GD+ LKRK +S +LESFLFYSGFYLPMYWSSR KLTN
Sbjct 126 AFRWSEENPNLQRKAEIVMQYYKGDEPLKRKVASTLLESFLFYSGFYLPMYWSSRAKLTN 185
Query 184 TADLIRLIIRDEAVHGYYIGYKCQRGLADLTDAERADHREYTCELLHTLYANEIDYAHDL 243
TAD+IRLIIRDEAVHGYYIGYK QRGLA + +A+RA+ ++YT ELL LY NE++Y DL
Sbjct 186 TADMIRLIIRDEAVHGYYIGYKYQRGLALVDEAKRAELKDYTYELLFELYDNEVEYTQDL 245
Query 244 YDELGWTDDVLPYMRYNANKALANLGYQPAFDRDTCQVNPAVRAALDPGAGENHDFFSGS 303
YDE+G T+DV ++RYNANKAL NLGY+ F RD VNPA+ +AL P A ENHDFFSGS
Sbjct 246 YDEVGLTEDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENHDFFSGS 305
Query 304 GSSYVMGTHQPTTDTDWDF 322
GSSYV+G T D DWDF
Sbjct 306 GSSYVIGKAVVTEDEDWDF 324
>gi|54026269|ref|YP_120511.1| ribonucleotide-diphosphate reductase subunit beta [Nocardia farcinica
IFM 10152]
gi|54017777|dbj|BAD59147.1| putative ribonucleoside-diphosphate reductase beta subunit [Nocardia
farcinica IFM 10152]
Length=320
Score = 486 bits (1251), Expect = 2e-135, Method: Compositional matrix adjust.
Identities = 227/319 (72%), Positives = 268/319 (85%), Gaps = 0/319 (0%)
Query 4 KLVERVHAINWNRLLDAKDLQVWERLTGNFWLPEKIPLSNDLASWQTLSSTEQQTTIRVF 63
KL++RV AINWNR+ D KD +VW RLTGNFWLPEK+P+SND+ SW TL+ EQQ T+RVF
Sbjct 2 KLIDRVSAINWNRVPDEKDAEVWARLTGNFWLPEKVPVSNDIPSWNTLTPHEQQLTMRVF 61
Query 64 TGLTLLDTAQATVGAVAMIDDAVTPHEEAVLTNMAFMESVHAKSYSSIFSTLCSTKQIDD 123
TGLTLLDT Q TVGAV++I DA+TPHEEAVLTN+AFMESVHAKSYSSIFSTLCSTK+ID+
Sbjct 62 TGLTLLDTIQGTVGAVSLIPDALTPHEEAVLTNIAFMESVHAKSYSSIFSTLCSTKEIDE 121
Query 124 AFDWSEQNPYLQRKAQIIVDYYRGDDALKRKASSVMLESFLFYSGFYLPMYWSSRGKLTN 183
AF WSE+N LQRKA+I++DYY+GDD LKRK +S +LESFLFYSGFYLPM+WSSR KLTN
Sbjct 122 AFRWSEENRNLQRKAEIVLDYYQGDDPLKRKVASTLLESFLFYSGFYLPMHWSSRAKLTN 181
Query 184 TADLIRLIIRDEAVHGYYIGYKCQRGLADLTDAERADHREYTCELLHTLYANEIDYAHDL 243
TAD+IRLIIRDEAVHGYYIGYK QRGL +++AER + + YT ELL+ LY NE++Y DL
Sbjct 182 TADMIRLIIRDEAVHGYYIGYKYQRGLEQVSEAEREELKNYTFELLYELYENEVEYTQDL 241
Query 244 YDELGWTDDVLPYMRYNANKALANLGYQPAFDRDTCQVNPAVRAALDPGAGENHDFFSGS 303
YDE+G T+DV ++RYNANKAL NLGY+ F D +VNPA+ +AL P A ENHDFFSGS
Sbjct 242 YDEVGLTEDVKTFLRYNANKALMNLGYEGLFPADETRVNPAILSALSPNADENHDFFSGS 301
Query 304 GSSYVMGTHQPTTDTDWDF 322
GSSYV+G T D DWDF
Sbjct 302 GSSYVIGKAVNTEDEDWDF 320
>gi|118617484|ref|YP_905816.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
ulcerans Agy99]
gi|118569594|gb|ABL04345.1| ribonucleoside-diphosphate reductase (beta chain) NrdF2 [Mycobacterium
ulcerans Agy99]
Length=324
Score = 486 bits (1251), Expect = 2e-135, Method: Compositional matrix adjust.
Identities = 229/324 (71%), Positives = 269/324 (84%), Gaps = 2/324 (0%)
Query 1 MTG--KLVERVHAINWNRLLDAKDLQVWERLTGNFWLPEKIPLSNDLASWQTLSSTEQQT 58
MTG KL++RV AINWNR+ D KD +VW+RLTGNFWLPEK+P+SND+ SW TL++ E+Q
Sbjct 1 MTGNAKLIDRVSAINWNRVQDEKDAEVWDRLTGNFWLPEKVPVSNDIPSWGTLTAGEKQL 60
Query 59 TIRVFTGLTLLDTAQATVGAVAMIDDAVTPHEEAVLTNMAFMESVHAKSYSSIFSTLCST 118
T+RVFTGLT+LDT Q TVGAV++I DA+TPHEEAVLTN+AFMESVHAKSYS IFSTLCST
Sbjct 61 TMRVFTGLTMLDTIQGTVGAVSLIPDALTPHEEAVLTNIAFMESVHAKSYSQIFSTLCST 120
Query 119 KQIDDAFDWSEQNPYLQRKAQIIVDYYRGDDALKRKASSVMLESFLFYSGFYLPMYWSSR 178
+IDDAF WSE+N LQRKA+I+++YYRGDD LKRK +S +LESFLFYSGFYLPMYWSSR
Sbjct 121 AEIDDAFRWSEENSNLQRKAEIVLEYYRGDDPLKRKVASTLLESFLFYSGFYLPMYWSSR 180
Query 179 GKLTNTADLIRLIIRDEAVHGYYIGYKCQRGLADLTDAERADHREYTCELLHTLYANEID 238
KLTNTAD+IRLIIRDEAVHGYYIGYK QRGLA +A R + ++YT ELL LY NE++
Sbjct 181 AKLTNTADMIRLIIRDEAVHGYYIGYKFQRGLAAADEARRTELKDYTYELLFELYDNEVE 240
Query 239 YAHDLYDELGWTDDVLPYMRYNANKALANLGYQPAFDRDTCQVNPAVRAALDPGAGENHD 298
Y DLYDE+G T+DV ++RYNANKAL NLGY+ F RD VNPA+ +AL P A ENHD
Sbjct 241 YTQDLYDEVGLTEDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENHD 300
Query 299 FFSGSGSSYVMGTHQPTTDTDWDF 322
FFSGSGSSYV+G T D DWDF
Sbjct 301 FFSGSGSSYVIGKAVATQDEDWDF 324
>gi|183981661|ref|YP_001849952.1| ribonucleoside-diphosphate reductase (beta chain) NrdF2 [Mycobacterium
marinum M]
gi|183174987|gb|ACC40097.1| ribonucleoside-diphosphate reductase (beta chain) NrdF2 [Mycobacterium
marinum M]
Length=324
Score = 486 bits (1251), Expect = 2e-135, Method: Compositional matrix adjust.
Identities = 229/324 (71%), Positives = 269/324 (84%), Gaps = 2/324 (0%)
Query 1 MTG--KLVERVHAINWNRLLDAKDLQVWERLTGNFWLPEKIPLSNDLASWQTLSSTEQQT 58
MTG KL++RV AINWNR+ D KD +VW+RLTGNFWLPEK+P+SND+ SW TL++ E+Q
Sbjct 1 MTGNAKLIDRVSAINWNRVQDEKDAEVWDRLTGNFWLPEKVPVSNDIPSWGTLTAGEKQL 60
Query 59 TIRVFTGLTLLDTAQATVGAVAMIDDAVTPHEEAVLTNMAFMESVHAKSYSSIFSTLCST 118
T+RVFTGLT+LDT Q TVGAV++I DA+TPHEEAVLTN+AFMESVHAKSYS IFSTLCST
Sbjct 61 TMRVFTGLTMLDTIQGTVGAVSLIPDALTPHEEAVLTNIAFMESVHAKSYSQIFSTLCST 120
Query 119 KQIDDAFDWSEQNPYLQRKAQIIVDYYRGDDALKRKASSVMLESFLFYSGFYLPMYWSSR 178
+IDDAF WSE+N LQRKA+I+++YYRGDD LKRK +S +LESFLFYSGFYLPMYWSSR
Sbjct 121 AEIDDAFRWSEENSNLQRKAEIVLEYYRGDDPLKRKVASTLLESFLFYSGFYLPMYWSSR 180
Query 179 GKLTNTADLIRLIIRDEAVHGYYIGYKCQRGLADLTDAERADHREYTCELLHTLYANEID 238
KLTNTAD+IRLIIRDEAVHGYYIGYK QRGLA +A R + ++YT ELL LY NE++
Sbjct 181 AKLTNTADMIRLIIRDEAVHGYYIGYKFQRGLAAADEARRTELKDYTYELLFELYDNEVE 240
Query 239 YAHDLYDELGWTDDVLPYMRYNANKALANLGYQPAFDRDTCQVNPAVRAALDPGAGENHD 298
Y DLYDE+G T+DV ++RYNANKAL NLGY+ F RD VNPA+ +AL P A ENHD
Sbjct 241 YTQDLYDEVGLTEDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENHD 300
Query 299 FFSGSGSSYVMGTHQPTTDTDWDF 322
FFSGSGSSYV+G T D DWDF
Sbjct 301 FFSGSGSSYVIGKAVVTQDEDWDF 324
>gi|240169547|ref|ZP_04748206.1| ribonucleoside-diphosphate reductase subunit beta [Mycobacterium
kansasii ATCC 12478]
Length=320
Score = 486 bits (1250), Expect = 3e-135, Method: Compositional matrix adjust.
Identities = 225/319 (71%), Positives = 268/319 (85%), Gaps = 0/319 (0%)
Query 4 KLVERVHAINWNRLLDAKDLQVWERLTGNFWLPEKIPLSNDLASWQTLSSTEQQTTIRVF 63
K+++RV AINWNRL D KD +VW+RLTGNFWLPEK+P+SND+ SW TL++ E+Q T+RVF
Sbjct 2 KVIDRVSAINWNRLQDEKDAEVWDRLTGNFWLPEKVPVSNDIPSWGTLTANEKQLTMRVF 61
Query 64 TGLTLLDTAQATVGAVAMIDDAVTPHEEAVLTNMAFMESVHAKSYSSIFSTLCSTKQIDD 123
TGLT+LDT Q TVGAV++I DA+TPHEEAVLTN+AFMESVHAKSYS IFSTLCST +IDD
Sbjct 62 TGLTMLDTIQGTVGAVSLIPDALTPHEEAVLTNIAFMESVHAKSYSQIFSTLCSTAEIDD 121
Query 124 AFDWSEQNPYLQRKAQIIVDYYRGDDALKRKASSVMLESFLFYSGFYLPMYWSSRGKLTN 183
AF WSE+NP LQRKA+I++ YYRGD+ LKRK +S +LESFLFYSGFYLPMYWSSR KLTN
Sbjct 122 AFRWSEENPNLQRKAEIVLQYYRGDEPLKRKVASTLLESFLFYSGFYLPMYWSSRAKLTN 181
Query 184 TADLIRLIIRDEAVHGYYIGYKCQRGLADLTDAERADHREYTCELLHTLYANEIDYAHDL 243
TAD+IRLIIRDEAVHGYYIGYK QRGLA + + +RA+ ++YT ELL LY NE++Y DL
Sbjct 182 TADMIRLIIRDEAVHGYYIGYKFQRGLALVDEVKRAELKDYTYELLFELYDNEVEYTQDL 241
Query 244 YDELGWTDDVLPYMRYNANKALANLGYQPAFDRDTCQVNPAVRAALDPGAGENHDFFSGS 303
YDE+G T+DV ++RYNANKAL NLGY+ F RD VNPA+ +AL P A ENHDFFSGS
Sbjct 242 YDEVGLTEDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENHDFFSGS 301
Query 304 GSSYVMGTHQPTTDTDWDF 322
GSSYV+G T D DW+F
Sbjct 302 GSSYVIGKAVVTEDEDWNF 320
>gi|254776333|ref|ZP_05217849.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
avium subsp. avium ATCC 25291]
Length=320
Score = 486 bits (1250), Expect = 3e-135, Method: Compositional matrix adjust.
Identities = 228/319 (72%), Positives = 268/319 (85%), Gaps = 0/319 (0%)
Query 4 KLVERVHAINWNRLLDAKDLQVWERLTGNFWLPEKIPLSNDLASWQTLSSTEQQTTIRVF 63
KL++RV AINWNRL D KD +VW+RLTGNFWLPEK+P+SNDL SW TL++ E+Q TIRVF
Sbjct 2 KLIDRVSAINWNRLQDDKDAEVWDRLTGNFWLPEKVPVSNDLQSWATLTAHEKQMTIRVF 61
Query 64 TGLTLLDTAQATVGAVAMIDDAVTPHEEAVLTNMAFMESVHAKSYSSIFSTLCSTKQIDD 123
TGLTLLDT Q TVGAV++I DA+TPHEEAV TN+AFMESVHA+SYS+IFSTLCST +IDD
Sbjct 62 TGLTLLDTIQGTVGAVSLIPDALTPHEEAVYTNIAFMESVHARSYSNIFSTLCSTAEIDD 121
Query 124 AFDWSEQNPYLQRKAQIIVDYYRGDDALKRKASSVMLESFLFYSGFYLPMYWSSRGKLTN 183
AF WSE+NP LQRKA+I++ YY+GD+ LKRK +S +LESFLFYSGFYLPMYWSSR KLTN
Sbjct 122 AFRWSEENPNLQRKAEIVMQYYKGDEPLKRKVASTLLESFLFYSGFYLPMYWSSRAKLTN 181
Query 184 TADLIRLIIRDEAVHGYYIGYKCQRGLADLTDAERADHREYTCELLHTLYANEIDYAHDL 243
TAD+IRLIIRDEAVHGYYIGYK QRGLA + DA+R + ++YT ELL LY NE++Y DL
Sbjct 182 TADMIRLIIRDEAVHGYYIGYKYQRGLALVDDAKRQELKDYTYELLFELYDNEVEYTQDL 241
Query 244 YDELGWTDDVLPYMRYNANKALANLGYQPAFDRDTCQVNPAVRAALDPGAGENHDFFSGS 303
YDE+G T+DV ++RYNANKAL NLGY+ F RD VNPA+ +AL P A ENHDFFSGS
Sbjct 242 YDEVGLTEDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENHDFFSGS 301
Query 304 GSSYVMGTHQPTTDTDWDF 322
GSSYV+G T D DWDF
Sbjct 302 GSSYVIGKAVVTEDEDWDF 320
>gi|339633056|ref|YP_004724698.1| ribonucleoside-diphosphate reductase subunit beta [Mycobacterium
africanum GM041182]
gi|339332412|emb|CCC28125.1| ribonucleoside-diphosphate reductase (beta chain) NRDF2 (ribonucleotide
reductase small subunit) [Mycobacterium africanum
GM041182]
Length=324
Score = 486 bits (1250), Expect = 3e-135, Method: Compositional matrix adjust.
Identities = 230/324 (71%), Positives = 269/324 (84%), Gaps = 2/324 (0%)
Query 1 MTG--KLVERVHAINWNRLLDAKDLQVWERLTGNFWLPEKIPLSNDLASWQTLSSTEQQT 58
MTG KL++RV AINWNRL D KD +VW+RLTGNFWLPEK+P+SND+ SW TL++ E+Q
Sbjct 1 MTGNAKLIDRVSAINWNRLQDEKDAEVWDRLTGNFWLPEKVPVSNDIPSWGTLTAGEKQL 60
Query 59 TIRVFTGLTLLDTAQATVGAVAMIDDAVTPHEEAVLTNMAFMESVHAKSYSSIFSTLCST 118
T+RVFTGLT+LDT Q TVGAV++I DA+TPHEEAVLTN+AFMESVHAKSYS IFSTLCST
Sbjct 61 TMRVFTGLTMLDTIQGTVGAVSLIPDALTPHEEAVLTNIAFMESVHAKSYSQIFSTLCST 120
Query 119 KQIDDAFDWSEQNPYLQRKAQIIVDYYRGDDALKRKASSVMLESFLFYSGFYLPMYWSSR 178
+IDDAF WSE+N LQRKA+I++ YYRGD+ LKRK +S +LESFLFYSGFYLPMYWSSR
Sbjct 121 AEIDDAFRWSEENRSLQRKAEIVLQYYRGDEPLKRKVASTLLESFLFYSGFYLPMYWSSR 180
Query 179 GKLTNTADLIRLIIRDEAVHGYYIGYKCQRGLADLTDAERADHREYTCELLHTLYANEID 238
KLTNTAD+IRLIIRDEAVHGYYIGYK QRGLA + D RA+ ++YT ELL LY NE++
Sbjct 181 AKLTNTADMIRLIIRDEAVHGYYIGYKFQRGLALVDDVTRAELKDYTYELLFELYDNEVE 240
Query 239 YAHDLYDELGWTDDVLPYMRYNANKALANLGYQPAFDRDTCQVNPAVRAALDPGAGENHD 298
Y DLYDE+G T+DV ++RYNANKAL NLGY+ F RD VNPA+ +AL P A ENHD
Sbjct 241 YTQDLYDEVGLTEDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENHD 300
Query 299 FFSGSGSSYVMGTHQPTTDTDWDF 322
FFSGSGSSYV+G T D DWDF
Sbjct 301 FFSGSGSSYVIGKAVVTEDDDWDF 324
>gi|15842613|ref|NP_337650.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
tuberculosis CDC1551]
gi|31794226|ref|NP_856719.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
bovis AF2122/97]
gi|57117051|ref|YP_177921.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
tuberculosis H37Rv]
80 more sequence titles
Length=324
Score = 485 bits (1249), Expect = 4e-135, Method: Compositional matrix adjust.
Identities = 230/324 (71%), Positives = 269/324 (84%), Gaps = 2/324 (0%)
Query 1 MTG--KLVERVHAINWNRLLDAKDLQVWERLTGNFWLPEKIPLSNDLASWQTLSSTEQQT 58
MTG KL++RV AINWNRL D KD +VW+RLTGNFWLPEK+P+SND+ SW TL++ E+Q
Sbjct 1 MTGNAKLIDRVSAINWNRLQDEKDAEVWDRLTGNFWLPEKVPVSNDIPSWGTLTAGEKQL 60
Query 59 TIRVFTGLTLLDTAQATVGAVAMIDDAVTPHEEAVLTNMAFMESVHAKSYSSIFSTLCST 118
T+RVFTGLT+LDT Q TVGAV++I DA+TPHEEAVLTN+AFMESVHAKSYS IFSTLCST
Sbjct 61 TMRVFTGLTMLDTIQGTVGAVSLIPDALTPHEEAVLTNIAFMESVHAKSYSQIFSTLCST 120
Query 119 KQIDDAFDWSEQNPYLQRKAQIIVDYYRGDDALKRKASSVMLESFLFYSGFYLPMYWSSR 178
+IDDAF WSE+N LQRKA+I++ YYRGD+ LKRK +S +LESFLFYSGFYLPMYWSSR
Sbjct 121 AEIDDAFRWSEENRNLQRKAEIVLQYYRGDEPLKRKVASTLLESFLFYSGFYLPMYWSSR 180
Query 179 GKLTNTADLIRLIIRDEAVHGYYIGYKCQRGLADLTDAERADHREYTCELLHTLYANEID 238
KLTNTAD+IRLIIRDEAVHGYYIGYK QRGLA + D RA+ ++YT ELL LY NE++
Sbjct 181 AKLTNTADMIRLIIRDEAVHGYYIGYKFQRGLALVDDVTRAELKDYTYELLFELYDNEVE 240
Query 239 YAHDLYDELGWTDDVLPYMRYNANKALANLGYQPAFDRDTCQVNPAVRAALDPGAGENHD 298
Y DLYDE+G T+DV ++RYNANKAL NLGY+ F RD VNPA+ +AL P A ENHD
Sbjct 241 YTQDLYDEVGLTEDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENHD 300
Query 299 FFSGSGSSYVMGTHQPTTDTDWDF 322
FFSGSGSSYV+G T D DWDF
Sbjct 301 FFSGSGSSYVIGKAVVTEDDDWDF 324
>gi|41409193|ref|NP_962029.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
avium subsp. paratuberculosis K-10]
gi|41398013|gb|AAS05643.1| NrdG [Mycobacterium avium subsp. paratuberculosis K-10]
Length=324
Score = 485 bits (1249), Expect = 4e-135, Method: Compositional matrix adjust.
Identities = 227/319 (72%), Positives = 268/319 (85%), Gaps = 0/319 (0%)
Query 4 KLVERVHAINWNRLLDAKDLQVWERLTGNFWLPEKIPLSNDLASWQTLSSTEQQTTIRVF 63
KL++RV AINWNRL D KD +VW+RLTGNFWLPEK+P+SNDL SW TL++ E+Q T+RVF
Sbjct 6 KLIDRVSAINWNRLQDDKDAEVWDRLTGNFWLPEKVPVSNDLQSWATLTAHEKQMTMRVF 65
Query 64 TGLTLLDTAQATVGAVAMIDDAVTPHEEAVLTNMAFMESVHAKSYSSIFSTLCSTKQIDD 123
TGLTLLDT Q TVGAV++I DA+TPHEEAV TN+AFMESVHA+SYS+IFSTLCST +IDD
Sbjct 66 TGLTLLDTIQGTVGAVSLIPDALTPHEEAVYTNIAFMESVHARSYSNIFSTLCSTAEIDD 125
Query 124 AFDWSEQNPYLQRKAQIIVDYYRGDDALKRKASSVMLESFLFYSGFYLPMYWSSRGKLTN 183
AF WSE+NP LQRKA+I++ YY+GD+ LKRK +S +LESFLFYSGFYLPMYWSSR KLTN
Sbjct 126 AFRWSEENPNLQRKAEIVMQYYKGDEPLKRKVASTLLESFLFYSGFYLPMYWSSRAKLTN 185
Query 184 TADLIRLIIRDEAVHGYYIGYKCQRGLADLTDAERADHREYTCELLHTLYANEIDYAHDL 243
TAD+IRLIIRDEAVHGYYIGYK QRGLA + DA+R + ++YT ELL LY NE++Y DL
Sbjct 186 TADMIRLIIRDEAVHGYYIGYKYQRGLALVDDAKRQELKDYTYELLFELYDNEVEYTQDL 245
Query 244 YDELGWTDDVLPYMRYNANKALANLGYQPAFDRDTCQVNPAVRAALDPGAGENHDFFSGS 303
YDE+G T+DV ++RYNANKAL NLGY+ F RD VNPA+ +AL P A ENHDFFSGS
Sbjct 246 YDEVGLTEDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENHDFFSGS 305
Query 304 GSSYVMGTHQPTTDTDWDF 322
GSSYV+G T D DWDF
Sbjct 306 GSSYVIGKAVVTEDEDWDF 324
>gi|336459260|gb|EGO38205.1| ribonucleotide reductase, beta subunit [Mycobacterium avium subsp.
paratuberculosis S397]
Length=320
Score = 484 bits (1247), Expect = 6e-135, Method: Compositional matrix adjust.
Identities = 227/319 (72%), Positives = 268/319 (85%), Gaps = 0/319 (0%)
Query 4 KLVERVHAINWNRLLDAKDLQVWERLTGNFWLPEKIPLSNDLASWQTLSSTEQQTTIRVF 63
KL++RV AINWNRL D KD +VW+RLTGNFWLPEK+P+SNDL SW TL++ E+Q T+RVF
Sbjct 2 KLIDRVSAINWNRLQDDKDAEVWDRLTGNFWLPEKVPVSNDLQSWATLTAHEKQMTMRVF 61
Query 64 TGLTLLDTAQATVGAVAMIDDAVTPHEEAVLTNMAFMESVHAKSYSSIFSTLCSTKQIDD 123
TGLTLLDT Q TVGAV++I DA+TPHEEAV TN+AFMESVHA+SYS+IFSTLCST +IDD
Sbjct 62 TGLTLLDTIQGTVGAVSLIPDALTPHEEAVYTNIAFMESVHARSYSNIFSTLCSTAEIDD 121
Query 124 AFDWSEQNPYLQRKAQIIVDYYRGDDALKRKASSVMLESFLFYSGFYLPMYWSSRGKLTN 183
AF WSE+NP LQRKA+I++ YY+GD+ LKRK +S +LESFLFYSGFYLPMYWSSR KLTN
Sbjct 122 AFRWSEENPNLQRKAEIVMQYYKGDEPLKRKVASTLLESFLFYSGFYLPMYWSSRAKLTN 181
Query 184 TADLIRLIIRDEAVHGYYIGYKCQRGLADLTDAERADHREYTCELLHTLYANEIDYAHDL 243
TAD+IRLIIRDEAVHGYYIGYK QRGLA + DA+R + ++YT ELL LY NE++Y DL
Sbjct 182 TADMIRLIIRDEAVHGYYIGYKYQRGLALVDDAKRQELKDYTYELLFELYDNEVEYTQDL 241
Query 244 YDELGWTDDVLPYMRYNANKALANLGYQPAFDRDTCQVNPAVRAALDPGAGENHDFFSGS 303
YDE+G T+DV ++RYNANKAL NLGY+ F RD VNPA+ +AL P A ENHDFFSGS
Sbjct 242 YDEVGLTEDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENHDFFSGS 301
Query 304 GSSYVMGTHQPTTDTDWDF 322
GSSYV+G T D DWDF
Sbjct 302 GSSYVIGKAVVTEDEDWDF 320
>gi|254820788|ref|ZP_05225789.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
intracellulare ATCC 13950]
Length=324
Score = 484 bits (1246), Expect = 7e-135, Method: Compositional matrix adjust.
Identities = 226/319 (71%), Positives = 267/319 (84%), Gaps = 0/319 (0%)
Query 4 KLVERVHAINWNRLLDAKDLQVWERLTGNFWLPEKIPLSNDLASWQTLSSTEQQTTIRVF 63
KL++RV AINWNRL D KD +VW+RLTGNFWLPEK+P+SNDL SW TL++ E+Q T+RVF
Sbjct 6 KLIDRVSAINWNRLQDEKDAEVWDRLTGNFWLPEKVPVSNDLPSWGTLTAHEKQMTMRVF 65
Query 64 TGLTLLDTAQATVGAVAMIDDAVTPHEEAVLTNMAFMESVHAKSYSSIFSTLCSTKQIDD 123
TGLTLLDT Q TVGAV++I DA+TPHEEAV TN+AFMESVHA+SYS+IFSTLCST +IDD
Sbjct 66 TGLTLLDTIQGTVGAVSLIPDALTPHEEAVYTNIAFMESVHARSYSNIFSTLCSTAEIDD 125
Query 124 AFDWSEQNPYLQRKAQIIVDYYRGDDALKRKASSVMLESFLFYSGFYLPMYWSSRGKLTN 183
AF WSE+NP LQRKA+I++ YY+GD+ LKRK +S +LESFLFYSGFYLPMYWSSR KLTN
Sbjct 126 AFRWSEENPNLQRKAEIVMQYYKGDEPLKRKVASTLLESFLFYSGFYLPMYWSSRAKLTN 185
Query 184 TADLIRLIIRDEAVHGYYIGYKCQRGLADLTDAERADHREYTCELLHTLYANEIDYAHDL 243
TAD+IRLIIRDEAVHGYYIGYK QRGLA + DA + + ++YT ELL LY NE++Y DL
Sbjct 186 TADMIRLIIRDEAVHGYYIGYKFQRGLALVDDARKQELKDYTYELLFELYDNEVEYTQDL 245
Query 244 YDELGWTDDVLPYMRYNANKALANLGYQPAFDRDTCQVNPAVRAALDPGAGENHDFFSGS 303
YDE+G T+DV ++RYNANKAL NLGY+ F RD VNPA+ +AL P A ENHDFFSGS
Sbjct 246 YDEVGLTEDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENHDFFSGS 305
Query 304 GSSYVMGTHQPTTDTDWDF 322
GSSYV+G T D DWDF
Sbjct 306 GSSYVIGKAVVTEDEDWDF 324
>gi|118465359|ref|YP_883075.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
avium 104]
gi|118166646|gb|ABK67543.1| ribonucleoside-diphosphate reductase, beta subunit [Mycobacterium
avium 104]
Length=324
Score = 484 bits (1245), Expect = 9e-135, Method: Compositional matrix adjust.
Identities = 226/319 (71%), Positives = 268/319 (85%), Gaps = 0/319 (0%)
Query 4 KLVERVHAINWNRLLDAKDLQVWERLTGNFWLPEKIPLSNDLASWQTLSSTEQQTTIRVF 63
KL++R+ AINWNRL D KD +VW+RLTGNFWLPEK+P+SNDL SW TL++ E+Q T+RVF
Sbjct 6 KLIDRLSAINWNRLQDDKDAEVWDRLTGNFWLPEKVPVSNDLQSWATLTAHEKQMTMRVF 65
Query 64 TGLTLLDTAQATVGAVAMIDDAVTPHEEAVLTNMAFMESVHAKSYSSIFSTLCSTKQIDD 123
TGLTLLDT Q TVGAV++I DA+TPHEEAV TN+AFMESVHA+SYS+IFSTLCST +IDD
Sbjct 66 TGLTLLDTIQGTVGAVSLIPDALTPHEEAVYTNIAFMESVHARSYSNIFSTLCSTAEIDD 125
Query 124 AFDWSEQNPYLQRKAQIIVDYYRGDDALKRKASSVMLESFLFYSGFYLPMYWSSRGKLTN 183
AF WSE+NP LQRKA+I++ YY+GD+ LKRK +S +LESFLFYSGFYLPMYWSSR KLTN
Sbjct 126 AFRWSEENPNLQRKAEIVMQYYKGDEPLKRKVASTLLESFLFYSGFYLPMYWSSRAKLTN 185
Query 184 TADLIRLIIRDEAVHGYYIGYKCQRGLADLTDAERADHREYTCELLHTLYANEIDYAHDL 243
TAD+IRLIIRDEAVHGYYIGYK QRGLA + DA+R + ++YT ELL LY NE++Y DL
Sbjct 186 TADMIRLIIRDEAVHGYYIGYKYQRGLALVDDAKRQELKDYTYELLFELYDNEVEYTQDL 245
Query 244 YDELGWTDDVLPYMRYNANKALANLGYQPAFDRDTCQVNPAVRAALDPGAGENHDFFSGS 303
YDE+G T+DV ++RYNANKAL NLGY+ F RD VNPA+ +AL P A ENHDFFSGS
Sbjct 246 YDEVGLTEDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENHDFFSGS 305
Query 304 GSSYVMGTHQPTTDTDWDF 322
GSSYV+G T D DWDF
Sbjct 306 GSSYVIGKAVVTEDEDWDF 324
>gi|342858107|ref|ZP_08714762.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
colombiense CECT 3035]
gi|342133811|gb|EGT86991.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
colombiense CECT 3035]
Length=320
Score = 483 bits (1243), Expect = 2e-134, Method: Compositional matrix adjust.
Identities = 226/319 (71%), Positives = 267/319 (84%), Gaps = 0/319 (0%)
Query 4 KLVERVHAINWNRLLDAKDLQVWERLTGNFWLPEKIPLSNDLASWQTLSSTEQQTTIRVF 63
KL++RV AINWNRL D KD +VW+RLTGNFWLPEK+P+SNDL SW TL++ E+Q T+RVF
Sbjct 2 KLIDRVSAINWNRLQDEKDAEVWDRLTGNFWLPEKVPVSNDLPSWGTLTAHEKQMTMRVF 61
Query 64 TGLTLLDTAQATVGAVAMIDDAVTPHEEAVLTNMAFMESVHAKSYSSIFSTLCSTKQIDD 123
TGLTLLDT Q TVGAV++I DA+TPHEEAV TN+AFMESVHA+SYS+IFSTLCST +IDD
Sbjct 62 TGLTLLDTIQGTVGAVSLIPDALTPHEEAVYTNIAFMESVHARSYSNIFSTLCSTAEIDD 121
Query 124 AFDWSEQNPYLQRKAQIIVDYYRGDDALKRKASSVMLESFLFYSGFYLPMYWSSRGKLTN 183
AF WSE+NP LQRKA+I++ YY+GD+ LKRK +S +LESFLFYSGFYLPMYWSSR KLTN
Sbjct 122 AFRWSEENPNLQRKAEIVMQYYKGDEPLKRKVASTLLESFLFYSGFYLPMYWSSRAKLTN 181
Query 184 TADLIRLIIRDEAVHGYYIGYKCQRGLADLTDAERADHREYTCELLHTLYANEIDYAHDL 243
TAD+IRLIIRDEAVHGYYIGYK QRGLA + DA + + ++YT ELL LY NE++Y DL
Sbjct 182 TADMIRLIIRDEAVHGYYIGYKYQRGLALVDDARKQELKDYTYELLFELYDNEVEYTQDL 241
Query 244 YDELGWTDDVLPYMRYNANKALANLGYQPAFDRDTCQVNPAVRAALDPGAGENHDFFSGS 303
YDE+G T+DV ++RYNANKAL NLGY+ F RD VNPA+ +AL P A ENHDFFSGS
Sbjct 242 YDEVGLTEDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENHDFFSGS 301
Query 304 GSSYVMGTHQPTTDTDWDF 322
GSSYV+G T D DWDF
Sbjct 302 GSSYVIGKAVVTEDEDWDF 320
>gi|226305840|ref|YP_002765800.1| ribonucleoside-diphosphate reductase beta chain [Rhodococcus
erythropolis PR4]
gi|229493405|ref|ZP_04387194.1| ribonucleoside-diphosphate reductase, beta subunit [Rhodococcus
erythropolis SK121]
gi|226184957|dbj|BAH33061.1| ribonucleoside-diphosphate reductase beta chain [Rhodococcus
erythropolis PR4]
gi|229319721|gb|EEN85553.1| ribonucleoside-diphosphate reductase, beta subunit [Rhodococcus
erythropolis SK121]
Length=321
Score = 483 bits (1242), Expect = 2e-134, Method: Compositional matrix adjust.
Identities = 228/319 (72%), Positives = 261/319 (82%), Gaps = 0/319 (0%)
Query 4 KLVERVHAINWNRLLDAKDLQVWERLTGNFWLPEKIPLSNDLASWQTLSSTEQQTTIRVF 63
KLV RV AINWNR+ D KD +VW+RL NFWLPEK+P+SND+ SW TL++ EQQ T+RVF
Sbjct 3 KLVSRVSAINWNRVQDEKDAEVWDRLVSNFWLPEKVPVSNDIPSWGTLTAQEQQLTMRVF 62
Query 64 TGLTLLDTAQATVGAVAMIDDAVTPHEEAVLTNMAFMESVHAKSYSSIFSTLCSTKQIDD 123
TGLTLLDT Q TVGAV++I DA+TPHEEAV TN+AFMESVHAKSYSSIFSTLCST IDD
Sbjct 63 TGLTLLDTIQGTVGAVSLIPDAITPHEEAVYTNIAFMESVHAKSYSSIFSTLCSTPDIDD 122
Query 124 AFDWSEQNPYLQRKAQIIVDYYRGDDALKRKASSVMLESFLFYSGFYLPMYWSSRGKLTN 183
AF WSE+NP LQRKAQI++DYY G+ LKRK +S +LESFLFYSGFYLPMYWSSR KLTN
Sbjct 123 AFRWSEENPNLQRKAQIVLDYYNGESPLKRKVASTLLESFLFYSGFYLPMYWSSRAKLTN 182
Query 184 TADLIRLIIRDEAVHGYYIGYKCQRGLADLTDAERADHREYTCELLHTLYANEIDYAHDL 243
TADLIRLIIRDEAVHGYYIGYK Q+GL LT+AER + + YT ELL LY NE+DY DL
Sbjct 183 TADLIRLIIRDEAVHGYYIGYKYQKGLEQLTEAEREELKNYTFELLFELYENEVDYTQDL 242
Query 244 YDELGWTDDVLPYMRYNANKALANLGYQPAFDRDTCQVNPAVRAALDPGAGENHDFFSGS 303
YD +G T+DV ++RYNANKAL NLGY+ F +D VNPA+ +AL P A ENHDFFSGS
Sbjct 243 YDGVGLTEDVKKFLRYNANKALNNLGYEGLFPKDETDVNPAILSALSPNADENHDFFSGS 302
Query 304 GSSYVMGTHQPTTDTDWDF 322
GSSYV+G T D DWDF
Sbjct 303 GSSYVIGKAVNTEDDDWDF 321
>gi|120403054|ref|YP_952883.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
vanbaalenii PYR-1]
gi|119955872|gb|ABM12877.1| ribonucleoside-diphosphate reductase class Ib beta subunit [Mycobacterium
vanbaalenii PYR-1]
Length=324
Score = 482 bits (1241), Expect = 3e-134, Method: Compositional matrix adjust.
Identities = 225/319 (71%), Positives = 267/319 (84%), Gaps = 0/319 (0%)
Query 4 KLVERVHAINWNRLLDAKDLQVWERLTGNFWLPEKIPLSNDLASWQTLSSTEQQTTIRVF 63
KL++RV AINWNRL D KD +VWERLTGNFWLPEK+P+SND+ SW TL++ E+Q T+RVF
Sbjct 6 KLIDRVSAINWNRLQDDKDAEVWERLTGNFWLPEKVPVSNDIPSWNTLTAHEKQLTMRVF 65
Query 64 TGLTLLDTAQATVGAVAMIDDAVTPHEEAVLTNMAFMESVHAKSYSSIFSTLCSTKQIDD 123
TGLTLLDT Q TVGAV++I DA+TPHEEAV TN+AFMESVHA+SYS+IFSTLCST +IDD
Sbjct 66 TGLTLLDTIQGTVGAVSLIPDALTPHEEAVYTNIAFMESVHARSYSNIFSTLCSTAEIDD 125
Query 124 AFDWSEQNPYLQRKAQIIVDYYRGDDALKRKASSVMLESFLFYSGFYLPMYWSSRGKLTN 183
AF WSE+NP LQRKA+I++ YY+GD+ LKRK +S +LESFLFYSGFYLPMYWSSR KLTN
Sbjct 126 AFRWSEENPNLQRKAEIVMQYYKGDEPLKRKVASTLLESFLFYSGFYLPMYWSSRAKLTN 185
Query 184 TADLIRLIIRDEAVHGYYIGYKCQRGLADLTDAERADHREYTCELLHTLYANEIDYAHDL 243
TAD+IRLIIRDEAVHGYYIGYK Q+GLA ++A R + ++YT ELL LY NE++Y DL
Sbjct 186 TADMIRLIIRDEAVHGYYIGYKFQKGLALESEATRQELKDYTYELLFELYDNEVEYTQDL 245
Query 244 YDELGWTDDVLPYMRYNANKALANLGYQPAFDRDTCQVNPAVRAALDPGAGENHDFFSGS 303
YDE+G T+DV ++RYNANKAL NLGY+ F RD VNPA+ +AL P A ENHDFFSGS
Sbjct 246 YDEVGLTEDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENHDFFSGS 305
Query 304 GSSYVMGTHQPTTDTDWDF 322
GSSYV+G T D DWDF
Sbjct 306 GSSYVIGKAVNTEDEDWDF 324
>gi|118469232|ref|YP_886661.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
smegmatis str. MC2 155]
gi|118469934|ref|YP_885432.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
smegmatis str. MC2 155]
gi|118170519|gb|ABK71415.1| ribonucleoside-diphosphate reductase, beta subunit [Mycobacterium
smegmatis str. MC2 155]
gi|118171221|gb|ABK72117.1| ribonucleoside-diphosphate reductase, beta subunit [Mycobacterium
smegmatis str. MC2 155]
Length=324
Score = 482 bits (1241), Expect = 3e-134, Method: Compositional matrix adjust.
Identities = 226/319 (71%), Positives = 264/319 (83%), Gaps = 0/319 (0%)
Query 4 KLVERVHAINWNRLLDAKDLQVWERLTGNFWLPEKIPLSNDLASWQTLSSTEQQTTIRVF 63
KL++RV AINWNRL D KD +VW RLTGNFWLPEK+P+SND+ SW TL+ E+Q T+RVF
Sbjct 6 KLIDRVSAINWNRLQDEKDAEVWHRLTGNFWLPEKVPVSNDIQSWHTLTDNEKQLTMRVF 65
Query 64 TGLTLLDTAQATVGAVAMIDDAVTPHEEAVLTNMAFMESVHAKSYSSIFSTLCSTKQIDD 123
TGLTLLDT Q TVGAV++I DAVTPHEEAVLTN+AFMESVHAKSYS+IFSTLCST +IDD
Sbjct 66 TGLTLLDTIQGTVGAVSLIPDAVTPHEEAVLTNIAFMESVHAKSYSNIFSTLCSTAEIDD 125
Query 124 AFDWSEQNPYLQRKAQIIVDYYRGDDALKRKASSVMLESFLFYSGFYLPMYWSSRGKLTN 183
AF WSE+NP LQRKA I++ YYRGD+ LKRK +S +LESFLFYSGFYLPMYWSSR KLTN
Sbjct 126 AFRWSEENPNLQRKAAIVMQYYRGDEPLKRKVASTLLESFLFYSGFYLPMYWSSRAKLTN 185
Query 184 TADLIRLIIRDEAVHGYYIGYKCQRGLADLTDAERADHREYTCELLHTLYANEIDYAHDL 243
TAD+IRLIIRDEAVHGYYIGYK QRGLA + + ++ + ++YT ELL LY NE++Y DL
Sbjct 186 TADMIRLIIRDEAVHGYYIGYKYQRGLALVDEEKKQELKDYTYELLFELYDNEVEYTQDL 245
Query 244 YDELGWTDDVLPYMRYNANKALANLGYQPAFDRDTCQVNPAVRAALDPGAGENHDFFSGS 303
YD +G T+DV ++RYNANKAL NLGY+ F RD VNPA+ +AL P A ENHDFFSGS
Sbjct 246 YDSVGLTEDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALAPNADENHDFFSGS 305
Query 304 GSSYVMGTHQPTTDTDWDF 322
GSSYV+G T D DWDF
Sbjct 306 GSSYVIGKAVNTEDEDWDF 324
>gi|262203177|ref|YP_003274385.1| ribonucleoside-diphosphate reductase [Gordonia bronchialis DSM
43247]
gi|262086524|gb|ACY22492.1| Ribonucleoside-diphosphate reductase [Gordonia bronchialis DSM
43247]
Length=334
Score = 482 bits (1240), Expect = 3e-134, Method: Compositional matrix adjust.
Identities = 230/319 (73%), Positives = 261/319 (82%), Gaps = 0/319 (0%)
Query 4 KLVERVHAINWNRLLDAKDLQVWERLTGNFWLPEKIPLSNDLASWQTLSSTEQQTTIRVF 63
KLV RV AINWNR+ D KD +VW+RLTGNFWLPEK+P+SND+ SW TL+ E+Q T+RVF
Sbjct 16 KLVSRVSAINWNRVPDEKDAEVWDRLTGNFWLPEKVPVSNDIPSWNTLTEYEKQLTMRVF 75
Query 64 TGLTLLDTAQATVGAVAMIDDAVTPHEEAVLTNMAFMESVHAKSYSSIFSTLCSTKQIDD 123
TGLTLLDT Q TVGAV++I DA TPHEEAVLTN+AFMESVHAKSYSSIFSTLCSTK+ID+
Sbjct 76 TGLTLLDTIQGTVGAVSLIPDATTPHEEAVLTNIAFMESVHAKSYSSIFSTLCSTKEIDE 135
Query 124 AFDWSEQNPYLQRKAQIIVDYYRGDDALKRKASSVMLESFLFYSGFYLPMYWSSRGKLTN 183
AF WSE+N LQRKAQI++DYYRGDD LKRK +S +LESFLFYSGFYLPMYWSSR KLTN
Sbjct 136 AFRWSEENDQLQRKAQIVMDYYRGDDPLKRKVASTLLESFLFYSGFYLPMYWSSRAKLTN 195
Query 184 TADLIRLIIRDEAVHGYYIGYKCQRGLADLTDAERADHREYTCELLHTLYANEIDYAHDL 243
TADLIRLIIRDEAVHGYYIGYK QRGL T R + ++YT ELL LY NE DY L
Sbjct 196 TADLIRLIIRDEAVHGYYIGYKYQRGLEVQTAERRQELKDYTFELLFELYDNESDYTEAL 255
Query 244 YDELGWTDDVLPYMRYNANKALANLGYQPAFDRDTCQVNPAVRAALDPGAGENHDFFSGS 303
YDE+G T+DV ++RYNANKAL NLGY+ F +D VNPA+ +AL P A ENHDFFSGS
Sbjct 256 YDEVGLTEDVKKFLRYNANKALMNLGYEAMFPKDETDVNPAILSALSPNADENHDFFSGS 315
Query 304 GSSYVMGTHQPTTDTDWDF 322
GSSYV+G T D DWDF
Sbjct 316 GSSYVIGKAVNTEDEDWDF 334
>gi|315445193|ref|YP_004078072.1| ribonucleoside-diphosphate reductase class Ib beta subunit [Mycobacterium
sp. Spyr1]
gi|315263496|gb|ADU00238.1| ribonucleoside-diphosphate reductase class Ib beta subunit [Mycobacterium
sp. Spyr1]
Length=320
Score = 482 bits (1240), Expect = 4e-134, Method: Compositional matrix adjust.
Identities = 225/319 (71%), Positives = 266/319 (84%), Gaps = 0/319 (0%)
Query 4 KLVERVHAINWNRLLDAKDLQVWERLTGNFWLPEKIPLSNDLASWQTLSSTEQQTTIRVF 63
KL++RV AINWNRL D KD +VW+RLTGNFWLPEK+P+SND+ SW TL++ E+Q T+RVF
Sbjct 2 KLIDRVSAINWNRLQDDKDAEVWDRLTGNFWLPEKVPVSNDIPSWNTLTAHEKQLTMRVF 61
Query 64 TGLTLLDTAQATVGAVAMIDDAVTPHEEAVLTNMAFMESVHAKSYSSIFSTLCSTKQIDD 123
TGLTLLDT Q TVGAV++I DA+TPHEEAV TN+AFMESVHA+SYS+IFSTLCST +IDD
Sbjct 62 TGLTLLDTIQGTVGAVSLIPDALTPHEEAVYTNIAFMESVHARSYSNIFSTLCSTSEIDD 121
Query 124 AFDWSEQNPYLQRKAQIIVDYYRGDDALKRKASSVMLESFLFYSGFYLPMYWSSRGKLTN 183
AF WSE+NP LQRKA+I++ YY+GD+ LKRK +S +LESFLFYSGFYLPMYWSSR KLTN
Sbjct 122 AFRWSEENPNLQRKAEIVMQYYKGDEPLKRKVASTLLESFLFYSGFYLPMYWSSRAKLTN 181
Query 184 TADLIRLIIRDEAVHGYYIGYKCQRGLADLTDAERADHREYTCELLHTLYANEIDYAHDL 243
TAD+IRLIIRDEAVHGYYIGYK Q+GLA DA R + ++YT ELL LY NE++Y DL
Sbjct 182 TADMIRLIIRDEAVHGYYIGYKFQKGLALADDATRQELKDYTYELLFELYDNEVEYTQDL 241
Query 244 YDELGWTDDVLPYMRYNANKALANLGYQPAFDRDTCQVNPAVRAALDPGAGENHDFFSGS 303
YDE+G T+DV ++RYNANKAL NLGY+ F RD VNPA+ +AL P A ENHDFFSGS
Sbjct 242 YDEVGLTEDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENHDFFSGS 301
Query 304 GSSYVMGTHQPTTDTDWDF 322
GSSYV+G T D DWDF
Sbjct 302 GSSYVIGKAVVTEDEDWDF 320
>gi|145224865|ref|YP_001135543.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
gilvum PYR-GCK]
gi|145217351|gb|ABP46755.1| ribonucleoside-diphosphate reductase class Ib beta subunit [Mycobacterium
gilvum PYR-GCK]
Length=320
Score = 481 bits (1239), Expect = 5e-134, Method: Compositional matrix adjust.
Identities = 225/319 (71%), Positives = 266/319 (84%), Gaps = 0/319 (0%)
Query 4 KLVERVHAINWNRLLDAKDLQVWERLTGNFWLPEKIPLSNDLASWQTLSSTEQQTTIRVF 63
KL++RV AINWNRL D KD +VW+RLTGNFWLPEK+P+SND+ SW TL++ E+Q T+RVF
Sbjct 2 KLIDRVSAINWNRLQDDKDAEVWDRLTGNFWLPEKVPVSNDIPSWNTLTAHEKQLTMRVF 61
Query 64 TGLTLLDTAQATVGAVAMIDDAVTPHEEAVLTNMAFMESVHAKSYSSIFSTLCSTKQIDD 123
TGLTLLDT Q TVGAV++I DA+TPHEEAV TN+AFMESVHA+SYS+IFSTLCST +IDD
Sbjct 62 TGLTLLDTIQGTVGAVSLIPDALTPHEEAVYTNIAFMESVHARSYSNIFSTLCSTSEIDD 121
Query 124 AFDWSEQNPYLQRKAQIIVDYYRGDDALKRKASSVMLESFLFYSGFYLPMYWSSRGKLTN 183
AF WSE+NP LQRKA+I++ YY+GD+ LKRK +S +LESFLFYSGFYLPMYWSSR KLTN
Sbjct 122 AFRWSEENPNLQRKAEIVMQYYKGDEPLKRKVASTLLESFLFYSGFYLPMYWSSRAKLTN 181
Query 184 TADLIRLIIRDEAVHGYYIGYKCQRGLADLTDAERADHREYTCELLHTLYANEIDYAHDL 243
TAD+IRLIIRDEAVHGYYIGYK Q+GLA DA R + ++YT ELL LY NE++Y DL
Sbjct 182 TADMIRLIIRDEAVHGYYIGYKFQKGLALADDATRQELKDYTYELLFELYDNEVEYTQDL 241
Query 244 YDELGWTDDVLPYMRYNANKALANLGYQPAFDRDTCQVNPAVRAALDPGAGENHDFFSGS 303
YDE+G T+DV ++RYNANKAL NLGY+ F RD VNPA+ +AL P A ENHDFFSGS
Sbjct 242 YDEVGLTEDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENHDFFSGS 301
Query 304 GSSYVMGTHQPTTDTDWDF 322
GSSYV+G T D DWDF
Sbjct 302 GSSYVIGKAVITEDEDWDF 320
>gi|289178104|gb|ADC85350.1| Ribonucleoside-diphosphate reductase beta chain [Bifidobacterium
animalis subsp. lactis BB-12]
gi|340364490|gb|AEK29781.1| Ribonucleoside-diphosphate reductase [Bifidobacterium animalis
subsp. lactis CNCM I-2494]
Length=326
Score = 481 bits (1239), Expect = 5e-134, Method: Compositional matrix adjust.
Identities = 225/319 (71%), Positives = 265/319 (84%), Gaps = 0/319 (0%)
Query 4 KLVERVHAINWNRLLDAKDLQVWERLTGNFWLPEKIPLSNDLASWQTLSSTEQQTTIRVF 63
KL++RV AINWNRL D KDL+VW+RLTGNFWLPEK+P+SND+ W+ +S E T+RVF
Sbjct 8 KLIDRVTAINWNRLDDEKDLEVWDRLTGNFWLPEKVPVSNDIPDWRQMSDAEHTLTMRVF 67
Query 64 TGLTLLDTAQATVGAVAMIDDAVTPHEEAVLTNMAFMESVHAKSYSSIFSTLCSTKQIDD 123
TGLTLLDT Q TVGAV++I DA+TPHEEAV TN+AFMESVHAKSYSSIFSTLCST++ID+
Sbjct 68 TGLTLLDTIQGTVGAVSLIPDALTPHEEAVYTNIAFMESVHAKSYSSIFSTLCSTREIDE 127
Query 124 AFDWSEQNPYLQRKAQIIVDYYRGDDALKRKASSVMLESFLFYSGFYLPMYWSSRGKLTN 183
AFDWSE+NP+LQRKAQI++DYY GDD LKRK +S +LESFLFYSGFYLPMY+SS KLTN
Sbjct 128 AFDWSEKNPHLQRKAQIVLDYYEGDDPLKRKVASTLLESFLFYSGFYLPMYFSSHAKLTN 187
Query 184 TADLIRLIIRDEAVHGYYIGYKCQRGLADLTDAERADHREYTCELLHTLYANEIDYAHDL 243
TAD+IRLIIRDEAVHGYYIGYK Q+GL +DA+RA+ YT +LL+ LY NE++Y H L
Sbjct 188 TADVIRLIIRDEAVHGYYIGYKYQKGLEMASDAKRAEMETYTYDLLNELYENEVEYTHSL 247
Query 244 YDELGWTDDVLPYMRYNANKALANLGYQPAFDRDTCQVNPAVRAALDPGAGENHDFFSGS 303
YDE+G +DDV ++ YNANKAL NLGY F + C VNPA+ AAL P A ENHDFFSGS
Sbjct 248 YDEVGLSDDVEKFLHYNANKALMNLGYPALFPSEICDVNPAILAALSPNADENHDFFSGS 307
Query 304 GSSYVMGTHQPTTDTDWDF 322
GSSYVMG + T D DWDF
Sbjct 308 GSSYVMGRAEETDDDDWDF 326
>gi|15827930|ref|NP_302193.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
leprae TN]
gi|221230407|ref|YP_002503823.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
leprae Br4923]
gi|14195114|sp|Q9CBQ2.1|RIR2_MYCLE RecName: Full=Ribonucleoside-diphosphate reductase subunit beta;
AltName: Full=Ribonucleotide reductase small subunit
gi|13093483|emb|CAC30684.1| ribonucleotide reductase small subunit [Mycobacterium leprae]
gi|219933514|emb|CAR71826.1| ribonucleotide reductase small subunit [Mycobacterium leprae
Br4923]
Length=325
Score = 481 bits (1238), Expect = 7e-134, Method: Compositional matrix adjust.
Identities = 229/324 (71%), Positives = 269/324 (84%), Gaps = 2/324 (0%)
Query 1 MTGK--LVERVHAINWNRLLDAKDLQVWERLTGNFWLPEKIPLSNDLASWQTLSSTEQQT 58
+TGK L++RV AINWN L D KD +VW+RLTGNFWLPEK+P+SNDL SW TL+++E+Q
Sbjct 2 LTGKMKLIDRVSAINWNWLQDDKDAEVWDRLTGNFWLPEKVPVSNDLPSWGTLTASEKQL 61
Query 59 TIRVFTGLTLLDTAQATVGAVAMIDDAVTPHEEAVLTNMAFMESVHAKSYSSIFSTLCST 118
T+RVFTGLTLLDT Q TVGAV++I DA+TPHEEAV TN+AFMESVHAKSYSSIFSTLCST
Sbjct 62 TMRVFTGLTLLDTIQGTVGAVSLIPDALTPHEEAVYTNIAFMESVHAKSYSSIFSTLCST 121
Query 119 KQIDDAFDWSEQNPYLQRKAQIIVDYYRGDDALKRKASSVMLESFLFYSGFYLPMYWSSR 178
+ID+AF WSE+N LQRKA+I+++YYRGD+ LKRK +S +LESFLFYSGFYLPMYWSSR
Sbjct 122 AEIDEAFRWSEENNNLQRKAKIVMEYYRGDEPLKRKVASTLLESFLFYSGFYLPMYWSSR 181
Query 179 GKLTNTADLIRLIIRDEAVHGYYIGYKCQRGLADLTDAERADHREYTCELLHTLYANEID 238
KLTNTAD+IRLIIRDEAVHGYYIGYK QRGL + DA RA+ +EYT ELL LY NE++
Sbjct 182 AKLTNTADMIRLIIRDEAVHGYYIGYKFQRGLVLVDDARRAELKEYTYELLFELYDNEVE 241
Query 239 YAHDLYDELGWTDDVLPYMRYNANKALANLGYQPAFDRDTCQVNPAVRAALDPGAGENHD 298
Y DLYD +G T+DV ++RYNANKAL NLGY+ F RD VNPA+ +AL P A ENHD
Sbjct 242 YTQDLYDRVGLTEDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENHD 301
Query 299 FFSGSGSSYVMGTHQPTTDTDWDF 322
FFSGSGSSYV+G T D DWDF
Sbjct 302 FFSGSGSSYVIGKAVVTEDEDWDF 325
>gi|183601891|ref|ZP_02963260.1| ribonucleotide-diphosphate reductase subunit beta [Bifidobacterium
animalis subsp. lactis HN019]
gi|219682805|ref|YP_002469188.1| ribonucleotide-diphosphate reductase subunit beta [Bifidobacterium
animalis subsp. lactis AD011]
gi|241190381|ref|YP_002967775.1| ribonucleotide-diphosphate reductase subunit beta [Bifidobacterium
animalis subsp. lactis Bl-04]
7 more sequence titles
Length=321
Score = 481 bits (1237), Expect = 8e-134, Method: Compositional matrix adjust.
Identities = 225/319 (71%), Positives = 265/319 (84%), Gaps = 0/319 (0%)
Query 4 KLVERVHAINWNRLLDAKDLQVWERLTGNFWLPEKIPLSNDLASWQTLSSTEQQTTIRVF 63
KL++RV AINWNRL D KDL+VW+RLTGNFWLPEK+P+SND+ W+ +S E T+RVF
Sbjct 3 KLIDRVTAINWNRLDDEKDLEVWDRLTGNFWLPEKVPVSNDIPDWRQMSDAEHTLTMRVF 62
Query 64 TGLTLLDTAQATVGAVAMIDDAVTPHEEAVLTNMAFMESVHAKSYSSIFSTLCSTKQIDD 123
TGLTLLDT Q TVGAV++I DA+TPHEEAV TN+AFMESVHAKSYSSIFSTLCST++ID+
Sbjct 63 TGLTLLDTIQGTVGAVSLIPDALTPHEEAVYTNIAFMESVHAKSYSSIFSTLCSTREIDE 122
Query 124 AFDWSEQNPYLQRKAQIIVDYYRGDDALKRKASSVMLESFLFYSGFYLPMYWSSRGKLTN 183
AFDWSE+NP+LQRKAQI++DYY GDD LKRK +S +LESFLFYSGFYLPMY+SS KLTN
Sbjct 123 AFDWSEKNPHLQRKAQIVLDYYEGDDPLKRKVASTLLESFLFYSGFYLPMYFSSHAKLTN 182
Query 184 TADLIRLIIRDEAVHGYYIGYKCQRGLADLTDAERADHREYTCELLHTLYANEIDYAHDL 243
TAD+IRLIIRDEAVHGYYIGYK Q+GL +DA+RA+ YT +LL+ LY NE++Y H L
Sbjct 183 TADVIRLIIRDEAVHGYYIGYKYQKGLEMASDAKRAEMETYTYDLLNELYENEVEYTHSL 242
Query 244 YDELGWTDDVLPYMRYNANKALANLGYQPAFDRDTCQVNPAVRAALDPGAGENHDFFSGS 303
YDE+G +DDV ++ YNANKAL NLGY F + C VNPA+ AAL P A ENHDFFSGS
Sbjct 243 YDEVGLSDDVEKFLHYNANKALMNLGYPALFPSEICDVNPAILAALSPNADENHDFFSGS 302
Query 304 GSSYVMGTHQPTTDTDWDF 322
GSSYVMG + T D DWDF
Sbjct 303 GSSYVMGRAEETDDDDWDF 321
>gi|334337743|ref|YP_004542895.1| ribonucleoside-diphosphate reductase [Isoptericola variabilis
225]
gi|334108111|gb|AEG45001.1| Ribonucleoside-diphosphate reductase [Isoptericola variabilis
225]
Length=326
Score = 480 bits (1236), Expect = 1e-133, Method: Compositional matrix adjust.
Identities = 227/319 (72%), Positives = 262/319 (83%), Gaps = 0/319 (0%)
Query 4 KLVERVHAINWNRLLDAKDLQVWERLTGNFWLPEKIPLSNDLASWQTLSSTEQQTTIRVF 63
KL++RV AINWNRL D KDL+VW+RL GNFWLPEK+P+SND+ SW TL+ E+ T RVF
Sbjct 8 KLIDRVSAINWNRLEDEKDLEVWDRLVGNFWLPEKVPVSNDIQSWNTLTEAEKLMTTRVF 67
Query 64 TGLTLLDTAQATVGAVAMIDDAVTPHEEAVLTNMAFMESVHAKSYSSIFSTLCSTKQIDD 123
TGLTLLDT Q TVGAV++I DA+TPHEEAV TN+AFMESVHAKSYSSIFSTL ST++IDD
Sbjct 68 TGLTLLDTIQGTVGAVSLIPDALTPHEEAVYTNIAFMESVHAKSYSSIFSTLISTREIDD 127
Query 124 AFDWSEQNPYLQRKAQIIVDYYRGDDALKRKASSVMLESFLFYSGFYLPMYWSSRGKLTN 183
AF WSEQNP LQRKA+I++DYYRGDD LKRK +S MLESFLFYSGFY PMYWSSR KLTN
Sbjct 128 AFAWSEQNPNLQRKAEIVLDYYRGDDPLKRKVASTMLESFLFYSGFYAPMYWSSRAKLTN 187
Query 184 TADLIRLIIRDEAVHGYYIGYKCQRGLADLTDAERADHREYTCELLHTLYANEIDYAHDL 243
TADLIRLIIRDEAVHGYYIGYK Q+GL ++ AE+ + + YT ELL LY NE++Y L
Sbjct 188 TADLIRLIIRDEAVHGYYIGYKFQKGLQRVSQAEQDELKAYTFELLFELYENEVEYTDAL 247
Query 244 YDELGWTDDVLPYMRYNANKALANLGYQPAFDRDTCQVNPAVRAALDPGAGENHDFFSGS 303
Y ELG T+DV ++RYNANKAL NLGY+ F ++ VNPA+ AAL P A ENHDFFSGS
Sbjct 248 YGELGLTEDVKKFLRYNANKALMNLGYEALFPKEDTDVNPAILAALSPNADENHDFFSGS 307
Query 304 GSSYVMGTHQPTTDTDWDF 322
GSSYV+G TTD DWDF
Sbjct 308 GSSYVIGKAVETTDDDWDF 326
>gi|319948549|ref|ZP_08022680.1| ribonucleotide-diphosphate reductase subunit beta [Dietzia cinnamea
P4]
gi|319437796|gb|EFV92785.1| ribonucleotide-diphosphate reductase subunit beta [Dietzia cinnamea
P4]
Length=338
Score = 480 bits (1236), Expect = 1e-133, Method: Compositional matrix adjust.
Identities = 229/319 (72%), Positives = 262/319 (83%), Gaps = 0/319 (0%)
Query 4 KLVERVHAINWNRLLDAKDLQVWERLTGNFWLPEKIPLSNDLASWQTLSSTEQQTTIRVF 63
KLV+RV AINWNR+ D D QVW RLT NFWLPEK+P+SND+ SWQTL+ EQ T RVF
Sbjct 20 KLVDRVSAINWNRVPDEVDDQVWGRLTTNFWLPEKVPVSNDIPSWQTLTEYEQTMTARVF 79
Query 64 TGLTLLDTAQATVGAVAMIDDAVTPHEEAVLTNMAFMESVHAKSYSSIFSTLCSTKQIDD 123
TGLTLLDT Q TVGAV+MI DA TPHEEAVLTN+AFMESVHAKSYS+IFSTLCST QID+
Sbjct 80 TGLTLLDTIQGTVGAVSMIPDASTPHEEAVLTNIAFMESVHAKSYSTIFSTLCSTPQIDE 139
Query 124 AFDWSEQNPYLQRKAQIIVDYYRGDDALKRKASSVMLESFLFYSGFYLPMYWSSRGKLTN 183
AF W+E+NPYLQRKA+II+ YY GD+ LKRK +SVMLESF+FYSGFYLPM WSSR KLTN
Sbjct 140 AFRWAEENPYLQRKAKIILGYYAGDNPLKRKIASVMLESFMFYSGFYLPMRWSSRAKLTN 199
Query 184 TADLIRLIIRDEAVHGYYIGYKCQRGLADLTDAERADHREYTCELLHTLYANEIDYAHDL 243
TAD+IRLIIRDEAVHGYYIGYK QRGL +T AER + ++YT ELL LY NE DY DL
Sbjct 200 TADVIRLIIRDEAVHGYYIGYKYQRGLEHVTQAERDELKDYTFELLFELYDNEADYTEDL 259
Query 244 YDELGWTDDVLPYMRYNANKALANLGYQPAFDRDTCQVNPAVRAALDPGAGENHDFFSGS 303
YD +GWT+DV ++RYNANKAL N+GY+ F +D V+PA+ +AL P A ENHDFFSGS
Sbjct 260 YDPVGWTEDVKKFLRYNANKALMNMGYEGMFPKDETDVDPAILSALSPNADENHDFFSGS 319
Query 304 GSSYVMGTHQPTTDTDWDF 322
GSSYVMG + T D DWDF
Sbjct 320 GSSYVMGKAEATEDEDWDF 338
>gi|343926904|ref|ZP_08766397.1| ribonucleoside-diphosphate reductase beta chain [Gordonia alkanivorans
NBRC 16433]
gi|343763264|dbj|GAA13323.1| ribonucleoside-diphosphate reductase beta chain [Gordonia alkanivorans
NBRC 16433]
Length=334
Score = 480 bits (1235), Expect = 1e-133, Method: Compositional matrix adjust.
Identities = 228/319 (72%), Positives = 261/319 (82%), Gaps = 0/319 (0%)
Query 4 KLVERVHAINWNRLLDAKDLQVWERLTGNFWLPEKIPLSNDLASWQTLSSTEQQTTIRVF 63
KLV RV AINWNR+ D KD +VW+RLTGNFWLPEK+P+SND+ SW TL+ E+Q T+RVF
Sbjct 16 KLVSRVSAINWNRVPDEKDAEVWDRLTGNFWLPEKVPVSNDIPSWGTLTEYEKQLTMRVF 75
Query 64 TGLTLLDTAQATVGAVAMIDDAVTPHEEAVLTNMAFMESVHAKSYSSIFSTLCSTKQIDD 123
TGLTLLDT Q TVGAV++I DA TPHEEAVLTN+AFMESVHAKSYSSIFSTLCSTK+ID+
Sbjct 76 TGLTLLDTIQGTVGAVSLIPDATTPHEEAVLTNIAFMESVHAKSYSSIFSTLCSTKEIDE 135
Query 124 AFDWSEQNPYLQRKAQIIVDYYRGDDALKRKASSVMLESFLFYSGFYLPMYWSSRGKLTN 183
AF WSE+N LQRKA+I++DYYRG+D LKRK +S +LESFLFYSGFYLPMYWSSR KLTN
Sbjct 136 AFRWSEENEQLQRKARIVMDYYRGEDPLKRKVASTLLESFLFYSGFYLPMYWSSRAKLTN 195
Query 184 TADLIRLIIRDEAVHGYYIGYKCQRGLADLTDAERADHREYTCELLHTLYANEIDYAHDL 243
TADLIRLIIRDEAVHGYYIGYK QRGL T R + ++YT ELL LY NE DY L
Sbjct 196 TADLIRLIIRDEAVHGYYIGYKYQRGLETQTPERRQELKDYTFELLFELYDNESDYTETL 255
Query 244 YDELGWTDDVLPYMRYNANKALANLGYQPAFDRDTCQVNPAVRAALDPGAGENHDFFSGS 303
YDE+G T+DV ++RYNANKAL NLGY+ F +D VNPA+ +AL P A ENHDFFSGS
Sbjct 256 YDEVGLTEDVKKFLRYNANKALMNLGYEAMFPKDETDVNPAILSALSPNADENHDFFSGS 315
Query 304 GSSYVMGTHQPTTDTDWDF 322
GSSYV+G T D DWDF
Sbjct 316 GSSYVIGKAVNTEDEDWDF 334
>gi|296140644|ref|YP_003647887.1| ribonucleoside-diphosphate reductase [Tsukamurella paurometabola
DSM 20162]
gi|296028778|gb|ADG79548.1| Ribonucleoside-diphosphate reductase [Tsukamurella paurometabola
DSM 20162]
Length=334
Score = 479 bits (1232), Expect = 3e-133, Method: Compositional matrix adjust.
Identities = 226/319 (71%), Positives = 262/319 (83%), Gaps = 0/319 (0%)
Query 4 KLVERVHAINWNRLLDAKDLQVWERLTGNFWLPEKIPLSNDLASWQTLSSTEQQTTIRVF 63
KLV RV AINWNR+ D KD +VW+RLTGNFWLPEK+P+SND+ SW TL+ E+Q T+RVF
Sbjct 16 KLVSRVSAINWNRVPDEKDAEVWDRLTGNFWLPEKVPVSNDIPSWGTLTDYEKQLTMRVF 75
Query 64 TGLTLLDTAQATVGAVAMIDDAVTPHEEAVLTNMAFMESVHAKSYSSIFSTLCSTKQIDD 123
TGLTLLDT Q TVGAV++I DA TPHEEAVLTN+AFMESVHAKSYSSIFSTLCST++IDD
Sbjct 76 TGLTLLDTIQGTVGAVSLIPDATTPHEEAVLTNIAFMESVHAKSYSSIFSTLCSTREIDD 135
Query 124 AFDWSEQNPYLQRKAQIIVDYYRGDDALKRKASSVMLESFLFYSGFYLPMYWSSRGKLTN 183
AF WSE+N LQRKAQI++D+YRGDD LKRK +S +LESFLFYSGFYLPMYWSSR KLTN
Sbjct 136 AFRWSEENEQLQRKAQIVMDFYRGDDPLKRKVASTLLESFLFYSGFYLPMYWSSRAKLTN 195
Query 184 TADLIRLIIRDEAVHGYYIGYKCQRGLADLTDAERADHREYTCELLHTLYANEIDYAHDL 243
TAD+IRLIIRDEAVHGYYIGYK QRGL + R + ++YT +LL LYANE DY L
Sbjct 196 TADMIRLIIRDEAVHGYYIGYKYQRGLETESPQRREELKDYTFDLLMELYANEEDYTESL 255
Query 244 YDELGWTDDVLPYMRYNANKALANLGYQPAFDRDTCQVNPAVRAALDPGAGENHDFFSGS 303
YDE+G ++DV ++RYNANKAL NLGY+ F +D VNPA+ +AL P A ENHDFFSGS
Sbjct 256 YDEVGLSEDVKKFLRYNANKALMNLGYEALFPKDATDVNPAILSALSPNADENHDFFSGS 315
Query 304 GSSYVMGTHQPTTDTDWDF 322
GSSYV+G T D DWDF
Sbjct 316 GSSYVIGKAVNTEDEDWDF 334
>gi|229818600|ref|YP_002880126.1| Ribonucleoside-diphosphate reductase [Beutenbergia cavernae DSM
12333]
gi|229564513|gb|ACQ78364.1| Ribonucleoside-diphosphate reductase [Beutenbergia cavernae DSM
12333]
Length=326
Score = 479 bits (1232), Expect = 4e-133, Method: Compositional matrix adjust.
Identities = 226/319 (71%), Positives = 259/319 (82%), Gaps = 0/319 (0%)
Query 4 KLVERVHAINWNRLLDAKDLQVWERLTGNFWLPEKIPLSNDLASWQTLSSTEQQTTIRVF 63
KLV RV AINWNRL D KDL+VW RL NFWLPEK+P+SND+ SW TL+ E+ T+RVF
Sbjct 8 KLVSRVSAINWNRLQDEKDLEVWNRLVNNFWLPEKVPVSNDIPSWGTLTDVEKTLTMRVF 67
Query 64 TGLTLLDTAQATVGAVAMIDDAVTPHEEAVLTNMAFMESVHAKSYSSIFSTLCSTKQIDD 123
TGLTLLDT Q TVGAV++I DA+TPHEEAV TN+AFMESVHAKSYSSIFSTLCST++IDD
Sbjct 68 TGLTLLDTIQGTVGAVSLIPDALTPHEEAVYTNIAFMESVHAKSYSSIFSTLCSTREIDD 127
Query 124 AFDWSEQNPYLQRKAQIIVDYYRGDDALKRKASSVMLESFLFYSGFYLPMYWSSRGKLTN 183
AF WSE+N LQRKA+I+++YYRGD+ LKRK +S +LESFLFYSGFYLPMYWSSR KLTN
Sbjct 128 AFRWSEENSNLQRKAEIVMEYYRGDEPLKRKVASTLLESFLFYSGFYLPMYWSSRAKLTN 187
Query 184 TADLIRLIIRDEAVHGYYIGYKCQRGLADLTDAERADHREYTCELLHTLYANEIDYAHDL 243
TADLIRLIIRDEAVHGYYIGYK QRGL L +R + + YT ELL LY NE+ Y DL
Sbjct 188 TADLIRLIIRDEAVHGYYIGYKFQRGLEALAPEQREEIKSYTYELLFELYENEVQYTEDL 247
Query 244 YDELGWTDDVLPYMRYNANKALANLGYQPAFDRDTCQVNPAVRAALDPGAGENHDFFSGS 303
YDE+G T+DV ++RYNANKAL NLGY+ F +D VNPA+ AAL P A ENHDFFSGS
Sbjct 248 YDEVGLTEDVKKFLRYNANKALMNLGYEALFPKDETDVNPAILAALSPNADENHDFFSGS 307
Query 304 GSSYVMGTHQPTTDTDWDF 322
GSSYV+G T D DWDF
Sbjct 308 GSSYVIGKAVNTEDDDWDF 326
>gi|333921308|ref|YP_004494889.1| ribonucleoside-diphosphate reductase [Amycolicicoccus subflavus
DQS3-9A1]
gi|333483529|gb|AEF42089.1| Ribonucleoside-diphosphate reductase [Amycolicicoccus subflavus
DQS3-9A1]
Length=335
Score = 478 bits (1229), Expect = 6e-133, Method: Compositional matrix adjust.
Identities = 224/319 (71%), Positives = 263/319 (83%), Gaps = 0/319 (0%)
Query 4 KLVERVHAINWNRLLDAKDLQVWERLTGNFWLPEKIPLSNDLASWQTLSSTEQQTTIRVF 63
KLV RV AINWNR+ D KD +VW+RLTGNFWLPEK+P+SND+ SW TL+ E+Q T+RVF
Sbjct 17 KLVSRVSAINWNRVPDEKDAEVWDRLTGNFWLPEKVPVSNDIPSWGTLTDYEKQLTMRVF 76
Query 64 TGLTLLDTAQATVGAVAMIDDAVTPHEEAVLTNMAFMESVHAKSYSSIFSTLCSTKQIDD 123
TGLTLLDT Q TVGAV++I DA+TPHEEAVLTN+AFMESVHAKSYS IFSTLCST+ IDD
Sbjct 77 TGLTLLDTIQGTVGAVSLIPDALTPHEEAVLTNIAFMESVHAKSYSQIFSTLCSTRDIDD 136
Query 124 AFDWSEQNPYLQRKAQIIVDYYRGDDALKRKASSVMLESFLFYSGFYLPMYWSSRGKLTN 183
AF WSE+N LQRKA+I+++YYRGDD LKRK +S +LESFLFYSGFYLPMYWSSR KLTN
Sbjct 137 AFRWSEENENLQRKAEIVMEYYRGDDPLKRKVASTLLESFLFYSGFYLPMYWSSRAKLTN 196
Query 184 TADLIRLIIRDEAVHGYYIGYKCQRGLADLTDAERADHREYTCELLHTLYANEIDYAHDL 243
TAD+IRLIIRDEAVHGYYIGYK QRGL ++ +R + ++YT ELL LY NE++Y DL
Sbjct 197 TADMIRLIIRDEAVHGYYIGYKYQRGLELVSPEKRQELKDYTFELLFELYDNEVEYTQDL 256
Query 244 YDELGWTDDVLPYMRYNANKALANLGYQPAFDRDTCQVNPAVRAALDPGAGENHDFFSGS 303
YD +G +DV ++RYNANKAL NLGY+P F +D VNPA+ +AL P A ENHDFFSGS
Sbjct 257 YDGVGLAEDVKKFLRYNANKALMNLGYEPLFPKDETDVNPAILSALSPNADENHDFFSGS 316
Query 304 GSSYVMGTHQPTTDTDWDF 322
GSSYV+G T D DWDF
Sbjct 317 GSSYVIGKAVNTEDEDWDF 335
>gi|326381484|ref|ZP_08203178.1| Ribonucleoside-diphosphate reductase [Gordonia neofelifaecis
NRRL B-59395]
gi|326199731|gb|EGD56911.1| Ribonucleoside-diphosphate reductase [Gordonia neofelifaecis
NRRL B-59395]
Length=333
Score = 478 bits (1229), Expect = 7e-133, Method: Compositional matrix adjust.
Identities = 226/319 (71%), Positives = 261/319 (82%), Gaps = 0/319 (0%)
Query 4 KLVERVHAINWNRLLDAKDLQVWERLTGNFWLPEKIPLSNDLASWQTLSSTEQQTTIRVF 63
KLV RV AINWNR+ D KD +VW+RLTGNFWLPEK+P+SND+ SW TL+ E+ T+RVF
Sbjct 15 KLVNRVSAINWNRVQDDKDAEVWDRLTGNFWLPEKVPVSNDIPSWGTLTDYEKTLTMRVF 74
Query 64 TGLTLLDTAQATVGAVAMIDDAVTPHEEAVLTNMAFMESVHAKSYSSIFSTLCSTKQIDD 123
TGLTLLDT Q TVGA+++I DA+TPHEEAV TN+AFMESVHAKSYSSIFSTLCSTK+ID+
Sbjct 75 TGLTLLDTIQGTVGAISLIPDALTPHEEAVYTNIAFMESVHAKSYSSIFSTLCSTKEIDE 134
Query 124 AFDWSEQNPYLQRKAQIIVDYYRGDDALKRKASSVMLESFLFYSGFYLPMYWSSRGKLTN 183
AF WSE+N YLQRKAQI++DYYRGDD LKRK +S +LESFLFYSGFYLPMYWSSR KLTN
Sbjct 135 AFRWSEENEYLQRKAQIVMDYYRGDDPLKRKVASTLLESFLFYSGFYLPMYWSSRAKLTN 194
Query 184 TADLIRLIIRDEAVHGYYIGYKCQRGLADLTDAERADHREYTCELLHTLYANEIDYAHDL 243
TAD+IRLIIRDEAVHGYYIGYK QRGL T R + ++YT ELL LY NE DY L
Sbjct 195 TADMIRLIIRDEAVHGYYIGYKYQRGLEVQTPERRQELKDYTFELLFELYDNETDYTEAL 254
Query 244 YDELGWTDDVLPYMRYNANKALANLGYQPAFDRDTCQVNPAVRAALDPGAGENHDFFSGS 303
YDE+G ++DV ++RYNANKAL NLGY+ F +D VNPA+ +AL P A ENHDFFSGS
Sbjct 255 YDEVGLSEDVKKFLRYNANKALMNLGYEAMFPKDETDVNPAILSALSPNADENHDFFSGS 314
Query 304 GSSYVMGTHQPTTDTDWDF 322
GSSYV+G T D DWDF
Sbjct 315 GSSYVIGKAVNTEDEDWDF 333
>gi|108798796|ref|YP_638993.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
sp. MCS]
gi|119867913|ref|YP_937865.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
sp. KMS]
gi|126434397|ref|YP_001070088.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
sp. JLS]
gi|108769215|gb|ABG07937.1| ribonucleoside-diphosphate reductase class Ib beta subunit [Mycobacterium
sp. MCS]
gi|119694002|gb|ABL91075.1| ribonucleoside-diphosphate reductase class Ib beta subunit [Mycobacterium
sp. KMS]
gi|126234197|gb|ABN97597.1| ribonucleoside-diphosphate reductase class Ib beta subunit [Mycobacterium
sp. JLS]
Length=320
Score = 476 bits (1225), Expect = 2e-132, Method: Compositional matrix adjust.
Identities = 223/319 (70%), Positives = 265/319 (84%), Gaps = 0/319 (0%)
Query 4 KLVERVHAINWNRLLDAKDLQVWERLTGNFWLPEKIPLSNDLASWQTLSSTEQQTTIRVF 63
KL++RV AINWNRL D KD +VW+RLTGNFWLPEK+P+SND+ SW TL++ E+Q T+RVF
Sbjct 2 KLIDRVSAINWNRLQDDKDAEVWDRLTGNFWLPEKVPVSNDIPSWNTLTAHEKQLTMRVF 61
Query 64 TGLTLLDTAQATVGAVAMIDDAVTPHEEAVLTNMAFMESVHAKSYSSIFSTLCSTKQIDD 123
TGLTLLDT Q TVGAV++I DA+TPHEEAV TN+AFMESVHA+SYS+IFSTLCST +IDD
Sbjct 62 TGLTLLDTIQGTVGAVSLIPDALTPHEEAVYTNIAFMESVHARSYSNIFSTLCSTAEIDD 121
Query 124 AFDWSEQNPYLQRKAQIIVDYYRGDDALKRKASSVMLESFLFYSGFYLPMYWSSRGKLTN 183
AF WSE+NP LQRKA+I++ YY+GD+ LKRK +S +LESFLFYSGFYLPMYWSSR KLTN
Sbjct 122 AFRWSEENPNLQRKAEIVMQYYKGDEPLKRKVASTLLESFLFYSGFYLPMYWSSRAKLTN 181
Query 184 TADLIRLIIRDEAVHGYYIGYKCQRGLADLTDAERADHREYTCELLHTLYANEIDYAHDL 243
TAD+IRLIIRDEAVHGYYIGYK Q+GLA A +A+ ++YT ELL LY NE++Y DL
Sbjct 182 TADMIRLIIRDEAVHGYYIGYKFQKGLALQDPATQAELKDYTYELLFELYDNEVEYTQDL 241
Query 244 YDELGWTDDVLPYMRYNANKALANLGYQPAFDRDTCQVNPAVRAALDPGAGENHDFFSGS 303
YD +G T+DV ++RYNANKAL NLGY+ F RD VNPA+ +AL P A ENHDFFSGS
Sbjct 242 YDSVGLTEDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENHDFFSGS 301
Query 304 GSSYVMGTHQPTTDTDWDF 322
GSSYV+G T D DWDF
Sbjct 302 GSSYVIGKAVVTEDEDWDF 320
>gi|239622882|ref|ZP_04665913.1| ribonucleoside-diphosphate reductase class Ib beta subunit [Bifidobacterium
longum subsp. infantis CCUG 52486]
gi|312133660|ref|YP_004000999.1| nrdf [Bifidobacterium longum subsp. longum BBMN68]
gi|317482331|ref|ZP_07941351.1| ribonucleotide reductase [Bifidobacterium sp. 12_1_47BFAA]
6 more sequence titles
Length=330
Score = 476 bits (1224), Expect = 3e-132, Method: Compositional matrix adjust.
Identities = 222/319 (70%), Positives = 263/319 (83%), Gaps = 0/319 (0%)
Query 4 KLVERVHAINWNRLLDAKDLQVWERLTGNFWLPEKIPLSNDLASWQTLSSTEQQTTIRVF 63
KL++RV AINWNRL D KDL+VW+RLTGNFWLPEK+P+SND+ SWQ ++ E T+RVF
Sbjct 12 KLIDRVSAINWNRLEDEKDLEVWDRLTGNFWLPEKVPVSNDIPSWQKMTEDEHTLTMRVF 71
Query 64 TGLTLLDTAQATVGAVAMIDDAVTPHEEAVLTNMAFMESVHAKSYSSIFSTLCSTKQIDD 123
TGLTLLDT Q TVGAV++I DA+TPHEEAV TN+AFMESVHAKSYSSIFSTLCST+QID
Sbjct 72 TGLTLLDTIQGTVGAVSLIPDALTPHEEAVYTNIAFMESVHAKSYSSIFSTLCSTEQIDA 131
Query 124 AFDWSEQNPYLQRKAQIIVDYYRGDDALKRKASSVMLESFLFYSGFYLPMYWSSRGKLTN 183
AFDWSE N +LQ+KA+I++DYY GD+ KRK +S +LESFLFYSGFYLPMY+S+ KLTN
Sbjct 132 AFDWSENNEFLQKKAEIVLDYYEGDNPYKRKVASTLLESFLFYSGFYLPMYFSAHAKLTN 191
Query 184 TADLIRLIIRDEAVHGYYIGYKCQRGLADLTDAERADHREYTCELLHTLYANEIDYAHDL 243
TAD+IRLIIRDEAVHGYYIGYK Q+G+A L+DAER D ++YT +LL+ LY NE++Y L
Sbjct 192 TADVIRLIIRDEAVHGYYIGYKYQKGIAQLSDAERLDLQDYTYDLLNELYDNEVEYTQSL 251
Query 244 YDELGWTDDVLPYMRYNANKALANLGYQPAFDRDTCQVNPAVRAALDPGAGENHDFFSGS 303
YD +G TDDV ++RYN NKAL NLGY F + C VNPA+ AAL P A ENHDFFSGS
Sbjct 252 YDRVGLTDDVEKFLRYNGNKALMNLGYPALFPAEICDVNPAILAALSPNADENHDFFSGS 311
Query 304 GSSYVMGTHQPTTDTDWDF 322
GSSYVMG + T D DWDF
Sbjct 312 GSSYVMGKAEETDDDDWDF 330
>gi|332671991|ref|YP_004454999.1| ribonucleoside-diphosphate reductase [Cellulomonas fimi ATCC
484]
gi|332341029|gb|AEE47612.1| Ribonucleoside-diphosphate reductase [Cellulomonas fimi ATCC
484]
Length=326
Score = 476 bits (1224), Expect = 3e-132, Method: Compositional matrix adjust.
Identities = 222/319 (70%), Positives = 261/319 (82%), Gaps = 0/319 (0%)
Query 4 KLVERVHAINWNRLLDAKDLQVWERLTGNFWLPEKIPLSNDLASWQTLSSTEQQTTIRVF 63
KL++RV AINWNRL D KD +VW+RL GNFWLPEK+P+SND+ SW TL+ E+ T+RVF
Sbjct 8 KLIDRVSAINWNRLEDEKDAEVWDRLVGNFWLPEKVPVSNDIQSWATLTEEEKTLTMRVF 67
Query 64 TGLTLLDTAQATVGAVAMIDDAVTPHEEAVLTNMAFMESVHAKSYSSIFSTLCSTKQIDD 123
TGLTLLDT Q TVGAV++I DA+TPHEEAV TN+AFMESVHAKSYSSIFSTLCST++ID+
Sbjct 68 TGLTLLDTIQGTVGAVSLIPDAITPHEEAVYTNIAFMESVHAKSYSSIFSTLCSTREIDE 127
Query 124 AFDWSEQNPYLQRKAQIIVDYYRGDDALKRKASSVMLESFLFYSGFYLPMYWSSRGKLTN 183
AF WSE+N LQRKA+I++ YY+GD LKRK +S +LESFLFYSGFYLPMYWSSR KLTN
Sbjct 128 AFRWSEENVNLQRKAEIVMKYYKGDSPLKRKVASTLLESFLFYSGFYLPMYWSSRAKLTN 187
Query 184 TADLIRLIIRDEAVHGYYIGYKCQRGLADLTDAERADHREYTCELLHTLYANEIDYAHDL 243
TADLIRLIIRDEAVHGYYIGYK Q+GL L+ ER + ++YT ELL LY NE++Y DL
Sbjct 188 TADLIRLIIRDEAVHGYYIGYKFQKGLEKLSPEERQELKDYTFELLFELYDNEVEYTQDL 247
Query 244 YDELGWTDDVLPYMRYNANKALANLGYQPAFDRDTCQVNPAVRAALDPGAGENHDFFSGS 303
YD +G T+DV ++RYNANKAL NLGY+ F RD VNPA+ +AL P A ENHDFFSGS
Sbjct 248 YDGVGLTEDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENHDFFSGS 307
Query 304 GSSYVMGTHQPTTDTDWDF 322
GSSYV+G T D DWDF
Sbjct 308 GSSYVIGKAVNTEDEDWDF 326
>gi|336322017|ref|YP_004601985.1| ribonucleoside-diphosphate reductase [Cellvibrio gilvus ATCC
13127]
gi|336105598|gb|AEI13417.1| Ribonucleoside-diphosphate reductase [Cellvibrio gilvus ATCC
13127]
Length=326
Score = 475 bits (1223), Expect = 4e-132, Method: Compositional matrix adjust.
Identities = 223/319 (70%), Positives = 261/319 (82%), Gaps = 0/319 (0%)
Query 4 KLVERVHAINWNRLLDAKDLQVWERLTGNFWLPEKIPLSNDLASWQTLSSTEQQTTIRVF 63
KL++RV AINWNRL D KD +VW+RL GNFWLPEK+P+SND+ SW TL+ E+ T+RVF
Sbjct 8 KLIDRVSAINWNRLEDDKDAEVWDRLVGNFWLPEKVPVSNDIQSWATLTEAEKTLTMRVF 67
Query 64 TGLTLLDTAQATVGAVAMIDDAVTPHEEAVLTNMAFMESVHAKSYSSIFSTLCSTKQIDD 123
TGLTLLDT Q TVGAV++I DA+TPHEEAV TN+AFMESVHAKSYSSIFSTLCSTK+ID+
Sbjct 68 TGLTLLDTIQGTVGAVSLIPDALTPHEEAVYTNIAFMESVHAKSYSSIFSTLCSTKEIDE 127
Query 124 AFDWSEQNPYLQRKAQIIVDYYRGDDALKRKASSVMLESFLFYSGFYLPMYWSSRGKLTN 183
AF WSE+N LQRKA+I++ YYRGD LKRK +S +LESFLFYSGFYLPMYWSSR KLTN
Sbjct 128 AFRWSEENVNLQRKAEIVMKYYRGDSPLKRKVASTLLESFLFYSGFYLPMYWSSRAKLTN 187
Query 184 TADLIRLIIRDEAVHGYYIGYKCQRGLADLTDAERADHREYTCELLHTLYANEIDYAHDL 243
TADLIRLIIRDEAVHGYYIGYK Q+GL L+ ER + ++YT ELL LY NE++Y DL
Sbjct 188 TADLIRLIIRDEAVHGYYIGYKFQKGLEKLSQTERDELKDYTFELLFELYDNEVEYTQDL 247
Query 244 YDELGWTDDVLPYMRYNANKALANLGYQPAFDRDTCQVNPAVRAALDPGAGENHDFFSGS 303
YD +G T+DV ++RYNANKAL NLGY+ F RD VNPA+ +AL P A ENHDFFSGS
Sbjct 248 YDGVGLTEDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENHDFFSGS 307
Query 304 GSSYVMGTHQPTTDTDWDF 322
GSSYV+G T D DW+F
Sbjct 308 GSSYVIGKAVNTEDEDWEF 326
>gi|333991420|ref|YP_004524034.1| ribonucleoside-diphosphate reductase (subunit beta) NrdF2 [Mycobacterium
sp. JDM601]
gi|333487388|gb|AEF36780.1| ribonucleoside-diphosphate reductase (beta chain) NrdF2 [Mycobacterium
sp. JDM601]
Length=324
Score = 475 bits (1223), Expect = 4e-132, Method: Compositional matrix adjust.
Identities = 223/319 (70%), Positives = 264/319 (83%), Gaps = 0/319 (0%)
Query 4 KLVERVHAINWNRLLDAKDLQVWERLTGNFWLPEKIPLSNDLASWQTLSSTEQQTTIRVF 63
+L++RV AINWNR+ D KD++VW+RLTGNFWLPEK+P+SNDL SW TL+ E+Q T+RVF
Sbjct 6 RLIDRVSAINWNRVQDDKDIEVWDRLTGNFWLPEKVPVSNDLPSWGTLTDEEKQLTMRVF 65
Query 64 TGLTLLDTAQATVGAVAMIDDAVTPHEEAVLTNMAFMESVHAKSYSSIFSTLCSTKQIDD 123
TGLTLLDT Q TVGAV++I DA+TPHEEAV TN+AFMESVHAKSYS IFSTLCST +ID+
Sbjct 66 TGLTLLDTIQGTVGAVSLIPDALTPHEEAVYTNIAFMESVHAKSYSQIFSTLCSTNEIDE 125
Query 124 AFDWSEQNPYLQRKAQIIVDYYRGDDALKRKASSVMLESFLFYSGFYLPMYWSSRGKLTN 183
AF WSE+N LQRKA I++ YYRGD+ LKRK +S +LESFLFYSGFYLPMYWSSRGKLTN
Sbjct 126 AFRWSEENGNLQRKAAIVMQYYRGDEPLKRKVASTLLESFLFYSGFYLPMYWSSRGKLTN 185
Query 184 TADLIRLIIRDEAVHGYYIGYKCQRGLADLTDAERADHREYTCELLHTLYANEIDYAHDL 243
TAD+IRLIIRDEAVHGYYIGYK QRGLA +A+RA+ ++YT ELL LY NE++Y DL
Sbjct 186 TADVIRLIIRDEAVHGYYIGYKFQRGLAMQDEAKRAELKDYTYELLFELYDNEVEYTQDL 245
Query 244 YDELGWTDDVLPYMRYNANKALANLGYQPAFDRDTCQVNPAVRAALDPGAGENHDFFSGS 303
YD +G T+DV ++RYNANKAL NLGY+ F RD VNPA+ +AL P ENHDFFSGS
Sbjct 246 YDGVGLTEDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNGDENHDFFSGS 305
Query 304 GSSYVMGTHQPTTDTDWDF 322
GSSYV+G T D DW+F
Sbjct 306 GSSYVIGKAVITEDEDWEF 324
>gi|311064961|ref|YP_003971687.1| ribonucleoside-diphosphate reductase subunit beta NrdF [Bifidobacterium
bifidum PRL2010]
gi|310867281|gb|ADP36650.1| NrdF Ribonucleoside-diphosphate reductase beta chain [Bifidobacterium
bifidum PRL2010]
Length=330
Score = 475 bits (1222), Expect = 5e-132, Method: Compositional matrix adjust.
Identities = 222/319 (70%), Positives = 261/319 (82%), Gaps = 0/319 (0%)
Query 4 KLVERVHAINWNRLLDAKDLQVWERLTGNFWLPEKIPLSNDLASWQTLSSTEQQTTIRVF 63
KL++RV AINWNRL D KDL+VW+RLTGNFWLPEK+P+SND+ SWQ +S E T+ VF
Sbjct 12 KLIDRVSAINWNRLEDEKDLEVWDRLTGNFWLPEKVPVSNDIPSWQKMSDDEHTLTMHVF 71
Query 64 TGLTLLDTAQATVGAVAMIDDAVTPHEEAVLTNMAFMESVHAKSYSSIFSTLCSTKQIDD 123
TGLTLLDT Q TVGAV++I DA+TPHEEAV TN+AFMESVHAKSYSSIFSTLCSTK+ID
Sbjct 72 TGLTLLDTIQGTVGAVSLIPDALTPHEEAVYTNIAFMESVHAKSYSSIFSTLCSTKEIDT 131
Query 124 AFDWSEQNPYLQRKAQIIVDYYRGDDALKRKASSVMLESFLFYSGFYLPMYWSSRGKLTN 183
AFDWSE+N +LQ+KA+I++DYY GD LKRK +S +LESFLFYSGFYLPMY+S+ KLTN
Sbjct 132 AFDWSERNEFLQKKAEIVLDYYEGDSPLKRKVASTLLESFLFYSGFYLPMYFSAHAKLTN 191
Query 184 TADLIRLIIRDEAVHGYYIGYKCQRGLADLTDAERADHREYTCELLHTLYANEIDYAHDL 243
TAD+IRLIIRDEAVHGYYIGYK QRGL ++DA+R + REYT LL+ LY NE++Y L
Sbjct 192 TADVIRLIIRDEAVHGYYIGYKYQRGLERVSDAKREEMREYTYNLLNELYDNEVEYTESL 251
Query 244 YDELGWTDDVLPYMRYNANKALANLGYQPAFDRDTCQVNPAVRAALDPGAGENHDFFSGS 303
Y+ +G TDDV ++RYN NKAL NLGY F + C VNPA+ AAL P A ENHDFFSGS
Sbjct 252 YERVGLTDDVEKFLRYNGNKALMNLGYPALFPAEACDVNPAILAALSPNADENHDFFSGS 311
Query 304 GSSYVMGTHQPTTDTDWDF 322
GSSYVMG + T D DWDF
Sbjct 312 GSSYVMGKAEETDDEDWDF 330
>gi|296455120|ref|YP_003662264.1| ribonucleoside-diphosphate reductase [Bifidobacterium longum
subsp. longum JDM301]
gi|296184552|gb|ADH01434.1| Ribonucleoside-diphosphate reductase [Bifidobacterium longum
subsp. longum JDM301]
Length=330
Score = 474 bits (1221), Expect = 5e-132, Method: Compositional matrix adjust.
Identities = 221/319 (70%), Positives = 263/319 (83%), Gaps = 0/319 (0%)
Query 4 KLVERVHAINWNRLLDAKDLQVWERLTGNFWLPEKIPLSNDLASWQTLSSTEQQTTIRVF 63
KL++RV AINWNRL D KDL+VW+RLTGNFWLPEK+P+SND+ SWQ ++ E T+RVF
Sbjct 12 KLIDRVSAINWNRLEDEKDLEVWDRLTGNFWLPEKVPVSNDIPSWQKMTEDEHTLTMRVF 71
Query 64 TGLTLLDTAQATVGAVAMIDDAVTPHEEAVLTNMAFMESVHAKSYSSIFSTLCSTKQIDD 123
TGLTLLDT Q TVGAV++I DA+TPHEEAV TN+AFMESVHAKSYSSIFSTLCST+QID
Sbjct 72 TGLTLLDTIQGTVGAVSLIPDALTPHEEAVYTNIAFMESVHAKSYSSIFSTLCSTEQIDA 131
Query 124 AFDWSEQNPYLQRKAQIIVDYYRGDDALKRKASSVMLESFLFYSGFYLPMYWSSRGKLTN 183
AFDWSE N +LQ+KA+I++DYY GD+ KRK +S +LESFLFYSGFYLPMY+S+ KLTN
Sbjct 132 AFDWSENNEFLQKKAEIVLDYYEGDNPYKRKVASTLLESFLFYSGFYLPMYFSAHAKLTN 191
Query 184 TADLIRLIIRDEAVHGYYIGYKCQRGLADLTDAERADHREYTCELLHTLYANEIDYAHDL 243
TAD+IRLIIRDEAVHGYYIGYK Q+G+A L+DAER D ++YT +LL+ LY NE++Y L
Sbjct 192 TADVIRLIIRDEAVHGYYIGYKYQKGIAQLSDAERLDLQDYTYDLLNELYDNEVEYTQSL 251
Query 244 YDELGWTDDVLPYMRYNANKALANLGYQPAFDRDTCQVNPAVRAALDPGAGENHDFFSGS 303
YD +G TDDV ++RYN NKAL NLGY F + C VNPA+ A+L P A ENHDFFSGS
Sbjct 252 YDRVGLTDDVEKFLRYNGNKALMNLGYPALFPAEICDVNPAILASLSPNADENHDFFSGS 311
Query 304 GSSYVMGTHQPTTDTDWDF 322
GSSYVMG + T D DWDF
Sbjct 312 GSSYVMGKAEETDDDDWDF 330
>gi|310288088|ref|YP_003939347.1| ribonucleoside-diphosphate reductase beta chain [Bifidobacterium
bifidum S17]
gi|313140805|ref|ZP_07802998.1| ribonucleoside-diphosphate reductase subunit beta [Bifidobacterium
bifidum NCIMB 41171]
gi|309252025|gb|ADO53773.1| Ribonucleoside-diphosphate reductase beta chain [Bifidobacterium
bifidum S17]
gi|313133315|gb|EFR50932.1| ribonucleoside-diphosphate reductase subunit beta [Bifidobacterium
bifidum NCIMB 41171]
Length=330
Score = 474 bits (1221), Expect = 6e-132, Method: Compositional matrix adjust.
Identities = 222/319 (70%), Positives = 261/319 (82%), Gaps = 0/319 (0%)
Query 4 KLVERVHAINWNRLLDAKDLQVWERLTGNFWLPEKIPLSNDLASWQTLSSTEQQTTIRVF 63
KL++RV AINWNRL D KDL+VW+RLTGNFWLPEK+P+SND+ SWQ +S E T+ VF
Sbjct 12 KLIDRVSAINWNRLEDEKDLEVWDRLTGNFWLPEKVPVSNDIPSWQKMSDDEHTLTMHVF 71
Query 64 TGLTLLDTAQATVGAVAMIDDAVTPHEEAVLTNMAFMESVHAKSYSSIFSTLCSTKQIDD 123
TGLTLLDT Q TVGAV++I DA+TPHEEAV TN+AFMESVHAKSYSSIFSTLCSTK+ID
Sbjct 72 TGLTLLDTIQGTVGAVSLIPDALTPHEEAVYTNIAFMESVHAKSYSSIFSTLCSTKEIDA 131
Query 124 AFDWSEQNPYLQRKAQIIVDYYRGDDALKRKASSVMLESFLFYSGFYLPMYWSSRGKLTN 183
AFDWSE+N +LQ+KA+I++DYY GD LKRK +S +LESFLFYSGFYLPMY+S+ KLTN
Sbjct 132 AFDWSERNEFLQKKAEIVLDYYEGDSPLKRKVASTLLESFLFYSGFYLPMYFSAHAKLTN 191
Query 184 TADLIRLIIRDEAVHGYYIGYKCQRGLADLTDAERADHREYTCELLHTLYANEIDYAHDL 243
TAD+IRLIIRDEAVHGYYIGYK QRGL ++DA+R + REYT LL+ LY NE++Y L
Sbjct 192 TADVIRLIIRDEAVHGYYIGYKYQRGLERVSDAKREEMREYTYNLLNELYDNEVEYTESL 251
Query 244 YDELGWTDDVLPYMRYNANKALANLGYQPAFDRDTCQVNPAVRAALDPGAGENHDFFSGS 303
Y+ +G TDDV ++RYN NKAL NLGY F + C VNPA+ AAL P A ENHDFFSGS
Sbjct 252 YERVGLTDDVEKFLRYNGNKALMNLGYPALFPAEACDVNPAILAALSPNADENHDFFSGS 311
Query 304 GSSYVMGTHQPTTDTDWDF 322
GSSYVMG + T D DWDF
Sbjct 312 GSSYVMGKAEETDDEDWDF 330
Lambda K H
0.319 0.133 0.411
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 567840616038
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40