BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv1983
Length=558
Score E
Sequences producing significant alignments: (Bits) Value
gi|57116933|ref|YP_177854.1| PE-PGRS family protein [Mycobacteri... 1048 0.0
gi|289754085|ref|ZP_06513463.1| PE-PGRS family protein [Mycobact... 1046 0.0
gi|148823197|ref|YP_001287951.1| PE-PGRS family protein [Mycobac... 1046 0.0
gi|15841460|ref|NP_336497.1| PE_PGRS family protein [Mycobacteri... 1046 0.0
gi|31793162|ref|NP_855655.1| PE-PGRS family protein [Mycobacteri... 1046 0.0
gi|340626996|ref|YP_004745448.1| PE-PGRS family protein [Mycobac... 1043 0.0
gi|308375740|ref|ZP_07668099.1| hypothetical protein TMGG_00529 ... 543 3e-152
gi|183982936|ref|YP_001851227.1| PE-PGRS family protein [Mycobac... 390 4e-106
gi|308375739|ref|ZP_07668098.1| putative PE family protein [Myco... 219 7e-55
gi|289750562|ref|ZP_06509940.1| PE-PGRS family protein [Mycobact... 219 1e-54
gi|118619532|ref|YP_907864.1| PE-PGRS family protein [Mycobacter... 182 1e-43
gi|253799995|ref|YP_003032996.1| PE-PGRS family protein [Mycobac... 178 2e-42
gi|339293981|gb|AEJ46092.1| PE-PGRS family protein [Mycobacteriu... 178 3e-42
gi|31792166|ref|NP_854659.1| PE-PGRS family protein [Mycobacteri... 178 3e-42
gi|148660757|ref|YP_001282280.1| PE-PGRS family protein [Mycobac... 178 3e-42
gi|340625989|ref|YP_004744441.1| PE-PGRS family protein [Mycobac... 177 4e-42
gi|289446553|ref|ZP_06436297.1| PE-PGRS family protein [Mycobact... 177 6e-42
gi|224989375|ref|YP_002644062.1| PE-PGRS family protein [Mycobac... 176 1e-41
gi|183983189|ref|YP_001851480.1| PE-PGRS family protein [Mycobac... 172 1e-40
gi|289555241|ref|ZP_06444451.1| LOW QUALITY PROTEIN: predicted p... 170 7e-40
gi|118618801|ref|YP_907133.1| PE-PGRS family protein [Mycobacter... 166 9e-39
gi|183985289|ref|YP_001853580.1| PE-PGRS family protein [Mycobac... 166 1e-38
gi|240172373|ref|ZP_04751032.1| PE-PGRS family protein [Mycobact... 156 8e-36
gi|183982972|ref|YP_001851263.1| PE-PGRS family protein [Mycobac... 152 1e-34
gi|183982127|ref|YP_001850418.1| PE-PGRS family protein [Mycobac... 152 2e-34
gi|289448241|ref|ZP_06437985.1| PE-PGRS family protein [Mycobact... 149 1e-33
gi|183982126|ref|YP_001850417.1| PE-PGRS family protein [Mycobac... 149 1e-33
gi|118617342|ref|YP_905674.1| PE-PGRS family protein [Mycobacter... 146 1e-32
gi|183985067|ref|YP_001853358.1| PE-PGRS family protein [Mycobac... 139 9e-31
gi|289575300|ref|ZP_06455527.1| PE-PGRS family protein [Mycobact... 139 1e-30
gi|148662430|ref|YP_001283953.1| PE-PGRS family protein [Mycobac... 139 2e-30
gi|289570762|ref|ZP_06450989.1| PE-PGRS family protein [Mycobact... 139 2e-30
gi|297635201|ref|ZP_06952981.1| PE-PGRS family protein [Mycobact... 139 2e-30
gi|294994300|ref|ZP_06799991.1| PE-PGRS family protein [Mycobact... 139 2e-30
gi|254232709|ref|ZP_04926036.1| PE-PGRS family protein [Mycobact... 139 2e-30
gi|289444130|ref|ZP_06433874.1| PE-PGRS family protein [Mycobact... 138 2e-30
gi|340627608|ref|YP_004746060.1| PE-PGRS family protein [Mycobac... 138 2e-30
gi|339632619|ref|YP_004724261.1| PE-PGRS family protein [Mycobac... 138 2e-30
gi|31793775|ref|NP_856268.1| PE-PGRS family protein [Mycobacteri... 138 2e-30
gi|57117002|ref|YP_177891.1| PE-PGRS family protein [Mycobacteri... 138 2e-30
gi|297732193|ref|ZP_06961311.1| PE-PGRS family protein [Mycobact... 138 3e-30
gi|289754709|ref|ZP_06514087.1| PE-PGRS family protein [Mycobact... 138 3e-30
gi|340626466|ref|YP_004744918.1| PE-PGRS family protein [Mycobac... 136 1e-29
gi|339294426|gb|AEJ46537.1| putative PE family protein [Mycobact... 135 1e-29
gi|339294428|gb|AEJ46539.1| hypothetical protein CCDC5079_1349 [... 135 2e-29
gi|339631519|ref|YP_004723161.1| PE-PGRS family protein [Mycobac... 135 2e-29
gi|289442899|ref|ZP_06432643.1| PE domain-containing protein [My... 135 2e-29
gi|15840912|ref|NP_335949.1| PE_PGRS family protein [Mycobacteri... 135 2e-29
gi|339298066|gb|AEJ50176.1| hypothetical protein CCDC5180_1339 [... 135 2e-29
gi|148822671|ref|YP_001287425.1| PE-PGRS family protein [Mycobac... 135 2e-29
>gi|57116933|ref|YP_177854.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Rv]
gi|148661793|ref|YP_001283316.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra]
gi|167970493|ref|ZP_02552770.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra]
56 more sequence titles
Length=558
Score = 1048 bits (2710), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 557/558 (99%), Positives = 558/558 (100%), Gaps = 0/558 (0%)
Query 1 VSFLVVVPEFLTSAAADVENIGSTLRAANAAAAASTTALAAAGADEVSAAVAALFARFGQ 60
+SFLVVVPEFLTSAAADVENIGSTLRAANAAAAASTTALAAAGADEVSAAVAALFARFGQ
Sbjct 1 MSFLVVVPEFLTSAAADVENIGSTLRAANAAAAASTTALAAAGADEVSAAVAALFARFGQ 60
Query 61 EYQAVSAQASAFHQQFVQTLNSASGSYAAAEATIASQLQTAQHDLLGAVNAPTETLLGRP 120
EYQAVSAQASAFHQQFVQTLNSASGSYAAAEATIASQLQTAQHDLLGAVNAPTETLLGRP
Sbjct 61 EYQAVSAQASAFHQQFVQTLNSASGSYAAAEATIASQLQTAQHDLLGAVNAPTETLLGRP 120
Query 121 LIGDGAPGTATSPNGGAGGLLYGNGGNGYSATASGVGGGAGGSAGLIGNGGAGGAGGPNA 180
LIGDGAPGTATSPNGGAGGLLYGNGGNGYSATASGVGGGAGGSAGLIGNGGAGGAGGPNA
Sbjct 121 LIGDGAPGTATSPNGGAGGLLYGNGGNGYSATASGVGGGAGGSAGLIGNGGAGGAGGPNA 180
Query 181 PGGAGGNGGWLLGNGGIGGPGGASSIPGMSGGAGGTGGAAGLLGWGANGGAGGLGDGVGV 240
PGGAGGNGGWLLGNGGIGGPGGASSIPGMSGGAGGTGGAAGLLGWGANGGAGGLGDGVGV
Sbjct 181 PGGAGGNGGWLLGNGGIGGPGGASSIPGMSGGAGGTGGAAGLLGWGANGGAGGLGDGVGV 240
Query 241 DRGTGGAGGRGGLLYGGYGVSGPGGDGRTVPLEIIHVTEPTVHANVNGGPTSTILVDTGS 300
DRGTGGAGGRGGLLYGGYGVSGPGGDGRTVPLEIIHVTEPTVHANVNGGPTSTILVDTGS
Sbjct 241 DRGTGGAGGRGGLLYGGYGVSGPGGDGRTVPLEIIHVTEPTVHANVNGGPTSTILVDTGS 300
Query 301 AGLVVSPEDVGGILGVLHMGLPTGLSISGYSGGLYYIFATYTTTVDFGNGIVTAPTAVNV 360
AGLVVSPEDVGGILGVLHMGLPTGLSISGYSGGLYYIFATYTTTVDFGNGIVTAPTAVNV
Sbjct 301 AGLVVSPEDVGGILGVLHMGLPTGLSISGYSGGLYYIFATYTTTVDFGNGIVTAPTAVNV 360
Query 361 VLLSIPTSPFAISTYFSALLADPTTTPFEAYFGAVGVDGVLGVGPNAVGPGPSIPTMALP 420
VLLSIPTSPFAISTYFSALLADPTTTPFEAYFGAVGVDGVLGVGPNAVGPGPSIPTMALP
Sbjct 361 VLLSIPTSPFAISTYFSALLADPTTTPFEAYFGAVGVDGVLGVGPNAVGPGPSIPTMALP 420
Query 421 GDLNQGVLIDAPAGELVFGPNPLPAPNVEVVGSPITTLYVKIDGGTPIPVPSIIDSGGVT 480
GDLNQGVLIDAPAGELVFGPNPLPAPNVEVVGSPITTLYVKIDGGTPIPVPSIIDSGGVT
Sbjct 421 GDLNQGVLIDAPAGELVFGPNPLPAPNVEVVGSPITTLYVKIDGGTPIPVPSIIDSGGVT 480
Query 481 GTIPSYVIGSGTLPANTNIEVYTSPGGDRLYAFNTNDYRPTVISSGLMNTGFLPFRFQPV 540
GTIPSYVIGSGTLPANTNIEVYTSPGGDRLYAFNTNDYRPTVISSGLMNTGFLPFRFQPV
Sbjct 481 GTIPSYVIGSGTLPANTNIEVYTSPGGDRLYAFNTNDYRPTVISSGLMNTGFLPFRFQPV 540
Query 541 YIDYSPSGIGTTVFDHPA 558
YIDYSPSGIGTTVFDHPA
Sbjct 541 YIDYSPSGIGTTVFDHPA 558
>gi|289754085|ref|ZP_06513463.1| PE-PGRS family protein [Mycobacterium tuberculosis EAS054]
gi|289694672|gb|EFD62101.1| PE-PGRS family protein [Mycobacterium tuberculosis EAS054]
Length=558
Score = 1046 bits (2706), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 556/558 (99%), Positives = 558/558 (100%), Gaps = 0/558 (0%)
Query 1 VSFLVVVPEFLTSAAADVENIGSTLRAANAAAAASTTALAAAGADEVSAAVAALFARFGQ 60
+SFLVVVPEFLTSAAADVENIGSTLRAANAAAAASTTALAAAGADEVSAAVAALFARFGQ
Sbjct 1 MSFLVVVPEFLTSAAADVENIGSTLRAANAAAAASTTALAAAGADEVSAAVAALFARFGQ 60
Query 61 EYQAVSAQASAFHQQFVQTLNSASGSYAAAEATIASQLQTAQHDLLGAVNAPTETLLGRP 120
EYQAVSAQASAFHQQFVQTLNSASGSYAAAEATIASQLQTAQHDLLGAVNAPTETLLGRP
Sbjct 61 EYQAVSAQASAFHQQFVQTLNSASGSYAAAEATIASQLQTAQHDLLGAVNAPTETLLGRP 120
Query 121 LIGDGAPGTATSPNGGAGGLLYGNGGNGYSATASGVGGGAGGSAGLIGNGGAGGAGGPNA 180
LIGDGAPGTATSPNGGAGGLLYGNGGNGYSATASGVGGGAGGSAGLIGNGGAGGAGGPNA
Sbjct 121 LIGDGAPGTATSPNGGAGGLLYGNGGNGYSATASGVGGGAGGSAGLIGNGGAGGAGGPNA 180
Query 181 PGGAGGNGGWLLGNGGIGGPGGASSIPGMSGGAGGTGGAAGLLGWGANGGAGGLGDGVGV 240
PGGAGGNGGWLLGNGGIGGPGGASSIPGMSGGAGGTGGAAGLLGWGANGGAGGLGDGVGV
Sbjct 181 PGGAGGNGGWLLGNGGIGGPGGASSIPGMSGGAGGTGGAAGLLGWGANGGAGGLGDGVGV 240
Query 241 DRGTGGAGGRGGLLYGGYGVSGPGGDGRTVPLEIIHVTEPTVHANVNGGPTSTILVDTGS 300
DRGTGGAGGRGGLLYGGYGVSGPGGDGRTVPLEIIHVTEPTVHANVNGGPTSTILVDTGS
Sbjct 241 DRGTGGAGGRGGLLYGGYGVSGPGGDGRTVPLEIIHVTEPTVHANVNGGPTSTILVDTGS 300
Query 301 AGLVVSPEDVGGILGVLHMGLPTGLSISGYSGGLYYIFATYTTTVDFGNGIVTAPTAVNV 360
AGLVVSPEDVGGILGVLHMGLPTGLSISGYSGGLYYIFATYTTTVDFGNGIVTAPTAVNV
Sbjct 301 AGLVVSPEDVGGILGVLHMGLPTGLSISGYSGGLYYIFATYTTTVDFGNGIVTAPTAVNV 360
Query 361 VLLSIPTSPFAISTYFSALLADPTTTPFEAYFGAVGVDGVLGVGPNAVGPGPSIPTMALP 420
VLLSIPTSPFAISTYFSALLADPTTTPFEAYFGAVGVDGVLGVGPNAVGPGPSIPTMALP
Sbjct 361 VLLSIPTSPFAISTYFSALLADPTTTPFEAYFGAVGVDGVLGVGPNAVGPGPSIPTMALP 420
Query 421 GDLNQGVLIDAPAGELVFGPNPLPAPNVEVVGSPITTLYVKIDGGTPIPVPSIIDSGGVT 480
GDLNQGVLIDAPAGELVFGPNPLPAPNVEVVGSPITTLYVKIDGGTPIPVPSIIDSGGVT
Sbjct 421 GDLNQGVLIDAPAGELVFGPNPLPAPNVEVVGSPITTLYVKIDGGTPIPVPSIIDSGGVT 480
Query 481 GTIPSYVIGSGTLPANTNIEVYTSPGGDRLYAFNTNDYRPTVISSGLMNTGFLPFRFQPV 540
GTIPSYVIGSGTLPANTNIEVYTSPGGDRLYAFNT+DYRPTVISSGLMNTGFLPFRFQPV
Sbjct 481 GTIPSYVIGSGTLPANTNIEVYTSPGGDRLYAFNTSDYRPTVISSGLMNTGFLPFRFQPV 540
Query 541 YIDYSPSGIGTTVFDHPA 558
YIDYSPSGIGTTVFDHPA
Sbjct 541 YIDYSPSGIGTTVFDHPA 558
>gi|148823197|ref|YP_001287951.1| PE-PGRS family protein [Mycobacterium tuberculosis F11]
gi|148721724|gb|ABR06349.1| PE-PGRS family protein [Mycobacterium tuberculosis F11]
Length=558
Score = 1046 bits (2706), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 556/558 (99%), Positives = 557/558 (99%), Gaps = 0/558 (0%)
Query 1 VSFLVVVPEFLTSAAADVENIGSTLRAANAAAAASTTALAAAGADEVSAAVAALFARFGQ 60
+SFLVVVPEFLTSAAADVENIGSTLRAANAAAAASTTALAAAGADEVSAAVAALFARFGQ
Sbjct 1 MSFLVVVPEFLTSAAADVENIGSTLRAANAAAAASTTALAAAGADEVSAAVAALFARFGQ 60
Query 61 EYQAVSAQASAFHQQFVQTLNSASGSYAAAEATIASQLQTAQHDLLGAVNAPTETLLGRP 120
EYQAVSAQASAFHQQFVQTLNSASGSYAAAEATIASQLQTAQHDLLGAVNAPTETLLGRP
Sbjct 61 EYQAVSAQASAFHQQFVQTLNSASGSYAAAEATIASQLQTAQHDLLGAVNAPTETLLGRP 120
Query 121 LIGDGAPGTATSPNGGAGGLLYGNGGNGYSATASGVGGGAGGSAGLIGNGGAGGAGGPNA 180
LIGDGAPGTATSPNGGAGGLLYGNGGNGYSATASGVGGGAGGSAGLIGNGGAGGAGGPNA
Sbjct 121 LIGDGAPGTATSPNGGAGGLLYGNGGNGYSATASGVGGGAGGSAGLIGNGGAGGAGGPNA 180
Query 181 PGGAGGNGGWLLGNGGIGGPGGASSIPGMSGGAGGTGGAAGLLGWGANGGAGGLGDGVGV 240
PGGAGGNGGWLLGNGGIGGPGGASSIPGMSGGAGGTGGAAGLLGWGANGGAGGLGDGVGV
Sbjct 181 PGGAGGNGGWLLGNGGIGGPGGASSIPGMSGGAGGTGGAAGLLGWGANGGAGGLGDGVGV 240
Query 241 DRGTGGAGGRGGLLYGGYGVSGPGGDGRTVPLEIIHVTEPTVHANVNGGPTSTILVDTGS 300
DRGTGGAGGRGGLLYGGYGVSGPGGDGRTVPLEIIHVTEPTVHANVNGGPTSTILVDTGS
Sbjct 241 DRGTGGAGGRGGLLYGGYGVSGPGGDGRTVPLEIIHVTEPTVHANVNGGPTSTILVDTGS 300
Query 301 AGLVVSPEDVGGILGVLHMGLPTGLSISGYSGGLYYIFATYTTTVDFGNGIVTAPTAVNV 360
AGLVVSPEDVGGILGVLHMGLPTGLSISGYSGGLYYIFATYTTTVDFGNGIVTAPTAVNV
Sbjct 301 AGLVVSPEDVGGILGVLHMGLPTGLSISGYSGGLYYIFATYTTTVDFGNGIVTAPTAVNV 360
Query 361 VLLSIPTSPFAISTYFSALLADPTTTPFEAYFGAVGVDGVLGVGPNAVGPGPSIPTMALP 420
VLLSIPTSPFAISTYFSALLADPTTTPFEAYFGAVGVDGVLGVGPNAVGPGPSIPTMALP
Sbjct 361 VLLSIPTSPFAISTYFSALLADPTTTPFEAYFGAVGVDGVLGVGPNAVGPGPSIPTMALP 420
Query 421 GDLNQGVLIDAPAGELVFGPNPLPAPNVEVVGSPITTLYVKIDGGTPIPVPSIIDSGGVT 480
GDLNQGVLIDAPAGELVFGPNPLPAPNVEVVGSPITTLYVKIDGGTPIPV SIIDSGGVT
Sbjct 421 GDLNQGVLIDAPAGELVFGPNPLPAPNVEVVGSPITTLYVKIDGGTPIPVSSIIDSGGVT 480
Query 481 GTIPSYVIGSGTLPANTNIEVYTSPGGDRLYAFNTNDYRPTVISSGLMNTGFLPFRFQPV 540
GTIPSYVIGSGTLPANTNIEVYTSPGGDRLYAFNTNDYRPTVISSGLMNTGFLPFRFQPV
Sbjct 481 GTIPSYVIGSGTLPANTNIEVYTSPGGDRLYAFNTNDYRPTVISSGLMNTGFLPFRFQPV 540
Query 541 YIDYSPSGIGTTVFDHPA 558
YIDYSPSGIGTTVFDHPA
Sbjct 541 YIDYSPSGIGTTVFDHPA 558
>gi|15841460|ref|NP_336497.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551]
gi|13881700|gb|AAK46311.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551]
Length=558
Score = 1046 bits (2705), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 556/558 (99%), Positives = 557/558 (99%), Gaps = 0/558 (0%)
Query 1 VSFLVVVPEFLTSAAADVENIGSTLRAANAAAAASTTALAAAGADEVSAAVAALFARFGQ 60
+SFLVVVPEFLTSAAADVENIGSTLRAANAAAAASTTALAAAGADEVSAAVAALFARFGQ
Sbjct 1 MSFLVVVPEFLTSAAADVENIGSTLRAANAAAAASTTALAAAGADEVSAAVAALFARFGQ 60
Query 61 EYQAVSAQASAFHQQFVQTLNSASGSYAAAEATIASQLQTAQHDLLGAVNAPTETLLGRP 120
EYQAVSAQASAFHQQFVQTLNSASGSYAAAEATIASQLQTAQHDLLGAVNAPTETLLGRP
Sbjct 61 EYQAVSAQASAFHQQFVQTLNSASGSYAAAEATIASQLQTAQHDLLGAVNAPTETLLGRP 120
Query 121 LIGDGAPGTATSPNGGAGGLLYGNGGNGYSATASGVGGGAGGSAGLIGNGGAGGAGGPNA 180
LIGDGAPGTATSPNGGAGGLLYGNGGNGYSATASGV GGAGGSAGLIGNGGAGGAGGPNA
Sbjct 121 LIGDGAPGTATSPNGGAGGLLYGNGGNGYSATASGVXGGAGGSAGLIGNGGAGGAGGPNA 180
Query 181 PGGAGGNGGWLLGNGGIGGPGGASSIPGMSGGAGGTGGAAGLLGWGANGGAGGLGDGVGV 240
PGGAGGNGGWLLGNGGIGGPGGASSIPGMSGGAGGTGGAAGLLGWGANGGAGGLGDGVGV
Sbjct 181 PGGAGGNGGWLLGNGGIGGPGGASSIPGMSGGAGGTGGAAGLLGWGANGGAGGLGDGVGV 240
Query 241 DRGTGGAGGRGGLLYGGYGVSGPGGDGRTVPLEIIHVTEPTVHANVNGGPTSTILVDTGS 300
DRGTGGAGGRGGLLYGGYGVSGPGGDGRTVPLEIIHVTEPTVHANVNGGPTSTILVDTGS
Sbjct 241 DRGTGGAGGRGGLLYGGYGVSGPGGDGRTVPLEIIHVTEPTVHANVNGGPTSTILVDTGS 300
Query 301 AGLVVSPEDVGGILGVLHMGLPTGLSISGYSGGLYYIFATYTTTVDFGNGIVTAPTAVNV 360
AGLVVSPEDVGGILGVLHMGLPTGLSISGYSGGLYYIFATYTTTVDFGNGIVTAPTAVNV
Sbjct 301 AGLVVSPEDVGGILGVLHMGLPTGLSISGYSGGLYYIFATYTTTVDFGNGIVTAPTAVNV 360
Query 361 VLLSIPTSPFAISTYFSALLADPTTTPFEAYFGAVGVDGVLGVGPNAVGPGPSIPTMALP 420
VLLSIPTSPFAISTYFSALLADPTTTPFEAYFGAVGVDGVLGVGPNAVGPGPSIPTMALP
Sbjct 361 VLLSIPTSPFAISTYFSALLADPTTTPFEAYFGAVGVDGVLGVGPNAVGPGPSIPTMALP 420
Query 421 GDLNQGVLIDAPAGELVFGPNPLPAPNVEVVGSPITTLYVKIDGGTPIPVPSIIDSGGVT 480
GDLNQGVLIDAPAGELVFGPNPLPAPNVEVVGSPITTLYVKIDGGTPIPVPSIIDSGGVT
Sbjct 421 GDLNQGVLIDAPAGELVFGPNPLPAPNVEVVGSPITTLYVKIDGGTPIPVPSIIDSGGVT 480
Query 481 GTIPSYVIGSGTLPANTNIEVYTSPGGDRLYAFNTNDYRPTVISSGLMNTGFLPFRFQPV 540
GTIPSYVIGSGTLPANTNIEVYTSPGGDRLYAFNTNDYRPTVISSGLMNTGFLPFRFQPV
Sbjct 481 GTIPSYVIGSGTLPANTNIEVYTSPGGDRLYAFNTNDYRPTVISSGLMNTGFLPFRFQPV 540
Query 541 YIDYSPSGIGTTVFDHPA 558
YIDYSPSGIGTTVFDHPA
Sbjct 541 YIDYSPSGIGTTVFDHPA 558
>gi|31793162|ref|NP_855655.1| PE-PGRS family protein [Mycobacterium bovis AF2122/97]
gi|224990360|ref|YP_002645047.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|31618754|emb|CAD96858.1| PE-PGRS FAMILY PROTEIN [Mycobacterium bovis AF2122/97]
gi|224773473|dbj|BAH26279.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|341601903|emb|CCC64577.1| PE-PGRS FAMILY PROTEIN [Mycobacterium bovis BCG str. Moreau RDJ]
Length=558
Score = 1046 bits (2705), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 556/558 (99%), Positives = 557/558 (99%), Gaps = 0/558 (0%)
Query 1 VSFLVVVPEFLTSAAADVENIGSTLRAANAAAAASTTALAAAGADEVSAAVAALFARFGQ 60
+SFLVVVPEFLTSAAADVENIGSTLRAANAAAAASTTALAAAGADEVSAAVAALFARFGQ
Sbjct 1 MSFLVVVPEFLTSAAADVENIGSTLRAANAAAAASTTALAAAGADEVSAAVAALFARFGQ 60
Query 61 EYQAVSAQASAFHQQFVQTLNSASGSYAAAEATIASQLQTAQHDLLGAVNAPTETLLGRP 120
EYQAVSAQASAFHQQFVQTLNSASGSYAAAEATIASQLQTAQHDLLGAVNAPTETLLGRP
Sbjct 61 EYQAVSAQASAFHQQFVQTLNSASGSYAAAEATIASQLQTAQHDLLGAVNAPTETLLGRP 120
Query 121 LIGDGAPGTATSPNGGAGGLLYGNGGNGYSATASGVGGGAGGSAGLIGNGGAGGAGGPNA 180
LIGDGAPGTATSPNGGAGGLLYGNGGNGYSATASGVGGGAGGSAGLIGNGGAGGAGGPNA
Sbjct 121 LIGDGAPGTATSPNGGAGGLLYGNGGNGYSATASGVGGGAGGSAGLIGNGGAGGAGGPNA 180
Query 181 PGGAGGNGGWLLGNGGIGGPGGASSIPGMSGGAGGTGGAAGLLGWGANGGAGGLGDGVGV 240
PGGAGGNGGWLLGNGGIGGPGGASSIPGMSGGAGGTGGA GLLGWGANGGAGGLGDGVGV
Sbjct 181 PGGAGGNGGWLLGNGGIGGPGGASSIPGMSGGAGGTGGATGLLGWGANGGAGGLGDGVGV 240
Query 241 DRGTGGAGGRGGLLYGGYGVSGPGGDGRTVPLEIIHVTEPTVHANVNGGPTSTILVDTGS 300
DRGTGGAGGRGGLLYGGYGVSGPGGDGRTVPLEIIHVTEPTVHANVNGGPTSTILVDTGS
Sbjct 241 DRGTGGAGGRGGLLYGGYGVSGPGGDGRTVPLEIIHVTEPTVHANVNGGPTSTILVDTGS 300
Query 301 AGLVVSPEDVGGILGVLHMGLPTGLSISGYSGGLYYIFATYTTTVDFGNGIVTAPTAVNV 360
AGLVVSPEDVGGILGVLHMGLPTGLSISGYSGGLYYIFATYTTTVDFGNGIVTAPTAVNV
Sbjct 301 AGLVVSPEDVGGILGVLHMGLPTGLSISGYSGGLYYIFATYTTTVDFGNGIVTAPTAVNV 360
Query 361 VLLSIPTSPFAISTYFSALLADPTTTPFEAYFGAVGVDGVLGVGPNAVGPGPSIPTMALP 420
VLLSIPTSPFAISTYFSALLADPTTTPFEAYFGAVGVDGVLGVGPNAVGPGPSIPTMALP
Sbjct 361 VLLSIPTSPFAISTYFSALLADPTTTPFEAYFGAVGVDGVLGVGPNAVGPGPSIPTMALP 420
Query 421 GDLNQGVLIDAPAGELVFGPNPLPAPNVEVVGSPITTLYVKIDGGTPIPVPSIIDSGGVT 480
GDLNQGVLIDAPAGELVFGPNPLPAPNVEVVGSPITTLYVKIDGGTPIPVPSIIDSGGVT
Sbjct 421 GDLNQGVLIDAPAGELVFGPNPLPAPNVEVVGSPITTLYVKIDGGTPIPVPSIIDSGGVT 480
Query 481 GTIPSYVIGSGTLPANTNIEVYTSPGGDRLYAFNTNDYRPTVISSGLMNTGFLPFRFQPV 540
GTIPSYVIGSGTLPANTNIEVYTSPGGDRLYAFNTNDYRPTVISSGLMNTGFLPFRFQPV
Sbjct 481 GTIPSYVIGSGTLPANTNIEVYTSPGGDRLYAFNTNDYRPTVISSGLMNTGFLPFRFQPV 540
Query 541 YIDYSPSGIGTTVFDHPA 558
YIDYSPSGIGTTVFDHPA
Sbjct 541 YIDYSPSGIGTTVFDHPA 558
>gi|340626996|ref|YP_004745448.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
gi|340005186|emb|CCC44335.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
Length=558
Score = 1043 bits (2696), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 555/558 (99%), Positives = 556/558 (99%), Gaps = 0/558 (0%)
Query 1 VSFLVVVPEFLTSAAADVENIGSTLRAANAAAAASTTALAAAGADEVSAAVAALFARFGQ 60
+SFLVVVPEFLTSAAADVENIGSTLRAANAAAAASTTALAAAGADEVSAAVAALFARFGQ
Sbjct 1 MSFLVVVPEFLTSAAADVENIGSTLRAANAAAAASTTALAAAGADEVSAAVAALFARFGQ 60
Query 61 EYQAVSAQASAFHQQFVQTLNSASGSYAAAEATIASQLQTAQHDLLGAVNAPTETLLGRP 120
EYQAVSAQASAFHQQFVQTLNSASGSYAAAEATIASQLQTAQHDLLGAVNAPTETLLGRP
Sbjct 61 EYQAVSAQASAFHQQFVQTLNSASGSYAAAEATIASQLQTAQHDLLGAVNAPTETLLGRP 120
Query 121 LIGDGAPGTATSPNGGAGGLLYGNGGNGYSATASGVGGGAGGSAGLIGNGGAGGAGGPNA 180
LIGDGAPGTATSPNGGAGGLLYGNGGNGYSATASGVGGGAGGSAGLIGNGGAGGAGGPNA
Sbjct 121 LIGDGAPGTATSPNGGAGGLLYGNGGNGYSATASGVGGGAGGSAGLIGNGGAGGAGGPNA 180
Query 181 PGGAGGNGGWLLGNGGIGGPGGASSIPGMSGGAGGTGGAAGLLGWGANGGAGGLGDGVGV 240
PGGAGGNGGWLLGNGGIGGPGGASSIPGMSGGAGGTGGAAGLLGWGANGGAGGLGDGVGV
Sbjct 181 PGGAGGNGGWLLGNGGIGGPGGASSIPGMSGGAGGTGGAAGLLGWGANGGAGGLGDGVGV 240
Query 241 DRGTGGAGGRGGLLYGGYGVSGPGGDGRTVPLEIIHVTEPTVHANVNGGPTSTILVDTGS 300
DRGTGGAGGRGGLLYGGYGVSGPGGDGRTVPLEIIHVTEPTVHANVNGGPTSTILVDTGS
Sbjct 241 DRGTGGAGGRGGLLYGGYGVSGPGGDGRTVPLEIIHVTEPTVHANVNGGPTSTILVDTGS 300
Query 301 AGLVVSPEDVGGILGVLHMGLPTGLSISGYSGGLYYIFATYTTTVDFGNGIVTAPTAVNV 360
AGLVVSPEDVGGILGVLHMGLPTGLSISGYSGGLYYIFATYTTTVDFGNGIVTAPTAVNV
Sbjct 301 AGLVVSPEDVGGILGVLHMGLPTGLSISGYSGGLYYIFATYTTTVDFGNGIVTAPTAVNV 360
Query 361 VLLSIPTSPFAISTYFSALLADPTTTPFEAYFGAVGVDGVLGVGPNAVGPGPSIPTMALP 420
VLLSIPTSPFAISTYFSALLADPTTTPFEAYFGAVGVDGVLGVGPNAVGPGPSIPTMALP
Sbjct 361 VLLSIPTSPFAISTYFSALLADPTTTPFEAYFGAVGVDGVLGVGPNAVGPGPSIPTMALP 420
Query 421 GDLNQGVLIDAPAGELVFGPNPLPAPNVEVVGSPITTLYVKIDGGTPIPVPSIIDSGGVT 480
GDLNQGVLIDAPAGELVFGPNPLPAPNVEVVGSPITTLYV IDGGTPIPVPSIIDSGGVT
Sbjct 421 GDLNQGVLIDAPAGELVFGPNPLPAPNVEVVGSPITTLYVSIDGGTPIPVPSIIDSGGVT 480
Query 481 GTIPSYVIGSGTLPANTNIEVYTSPGGDRLYAFNTNDYRPTVISSGLMNTGFLPFRFQPV 540
GTIPSYVIGSGTLPANTNIEVYTSPGGDRLYAFNTNDYRPTVISSGLMNTGFLPF FQPV
Sbjct 481 GTIPSYVIGSGTLPANTNIEVYTSPGGDRLYAFNTNDYRPTVISSGLMNTGFLPFAFQPV 540
Query 541 YIDYSPSGIGTTVFDHPA 558
YIDYSPSGIGTTVFDHPA
Sbjct 541 YIDYSPSGIGTTVFDHPA 558
>gi|308375740|ref|ZP_07668099.1| hypothetical protein TMGG_00529 [Mycobacterium tuberculosis SUMu007]
gi|308345295|gb|EFP34146.1| hypothetical protein TMGG_00529 [Mycobacterium tuberculosis SUMu007]
Length=350
Score = 543 bits (1399), Expect = 3e-152, Method: Compositional matrix adjust.
Identities = 293/293 (100%), Positives = 293/293 (100%), Gaps = 0/293 (0%)
Query 266 DGRTVPLEIIHVTEPTVHANVNGGPTSTILVDTGSAGLVVSPEDVGGILGVLHMGLPTGL 325
DGRTVPLEIIHVTEPTVHANVNGGPTSTILVDTGSAGLVVSPEDVGGILGVLHMGLPTGL
Sbjct 58 DGRTVPLEIIHVTEPTVHANVNGGPTSTILVDTGSAGLVVSPEDVGGILGVLHMGLPTGL 117
Query 326 SISGYSGGLYYIFATYTTTVDFGNGIVTAPTAVNVVLLSIPTSPFAISTYFSALLADPTT 385
SISGYSGGLYYIFATYTTTVDFGNGIVTAPTAVNVVLLSIPTSPFAISTYFSALLADPTT
Sbjct 118 SISGYSGGLYYIFATYTTTVDFGNGIVTAPTAVNVVLLSIPTSPFAISTYFSALLADPTT 177
Query 386 TPFEAYFGAVGVDGVLGVGPNAVGPGPSIPTMALPGDLNQGVLIDAPAGELVFGPNPLPA 445
TPFEAYFGAVGVDGVLGVGPNAVGPGPSIPTMALPGDLNQGVLIDAPAGELVFGPNPLPA
Sbjct 178 TPFEAYFGAVGVDGVLGVGPNAVGPGPSIPTMALPGDLNQGVLIDAPAGELVFGPNPLPA 237
Query 446 PNVEVVGSPITTLYVKIDGGTPIPVPSIIDSGGVTGTIPSYVIGSGTLPANTNIEVYTSP 505
PNVEVVGSPITTLYVKIDGGTPIPVPSIIDSGGVTGTIPSYVIGSGTLPANTNIEVYTSP
Sbjct 238 PNVEVVGSPITTLYVKIDGGTPIPVPSIIDSGGVTGTIPSYVIGSGTLPANTNIEVYTSP 297
Query 506 GGDRLYAFNTNDYRPTVISSGLMNTGFLPFRFQPVYIDYSPSGIGTTVFDHPA 558
GGDRLYAFNTNDYRPTVISSGLMNTGFLPFRFQPVYIDYSPSGIGTTVFDHPA
Sbjct 298 GGDRLYAFNTNDYRPTVISSGLMNTGFLPFRFQPVYIDYSPSGIGTTVFDHPA 350
>gi|183982936|ref|YP_001851227.1| PE-PGRS family protein [Mycobacterium marinum M]
gi|183176262|gb|ACC41372.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=553
Score = 390 bits (1001), Expect = 4e-106, Method: Compositional matrix adjust.
Identities = 209/301 (70%), Positives = 248/301 (83%), Gaps = 2/301 (0%)
Query 258 YGVSGPGGDGRTVPLEIIHVTEPTVHANVNGGPTSTILVDTGSAGLVVSPEDVGGILGVL 317
YGVSG GGDGRTVPLE+++VTEP V+ NVNGG ++ +L+DTGSAGLV+ +DVGG LG+L
Sbjct 254 YGVSGAGGDGRTVPLEVVNVTEPVVNVNVNGGHSTPVLIDTGSAGLVMQVKDVGGPLGLL 313
Query 318 HMGLPTGLSISGYSGGLYYIFATYTTTVDFGNGIVTAPTAVNVVLLSIPTSPFAISTYFS 377
MGLP+G+S+S YSGGL Y+FATY TTVDFGNGIVT+ T V+VVL SIPTSP+A++T+ +
Sbjct 314 RMGLPSGISMSAYSGGLTYLFATYPTTVDFGNGIVTSTTGVDVVLFSIPTSPYALTTWLN 373
Query 378 ALLADPTTTPFEAYFGAVGVDGVLGVGPNAVGPGPSIPTMALPGDLNQGVLIDAPAGELV 437
AL ++P TTPF+AYF + GVDGVLGVGPNAVGPGPSIPT AL G L QG+LID GELV
Sbjct 374 ALWSNPLTTPFDAYFQSAGVDGVLGVGPNAVGPGPSIPTQALGGGLGQGLLIDMKGGELV 433
Query 438 FGPNPLPAPNVEVVGSPITTLYVKIDGGTPIPVPSIIDSGGVTGTIPSYVIGSGTLPANT 497
FGPNPL P + G+PI TL+V ++GG P+ VPSIIDSGGV GTIPS VIG TLPANT
Sbjct 434 FGPNPL-TPEFSISGAPIATLWVSVNGGAPVAVPSIIDSGGVMGTIPSSVIGGSTLPANT 492
Query 498 NIEVYT-SPGGDRLYAFNTNDYRPTVISSGLMNTGFLPFRFQPVYIDYSPSGIGTTVFDH 556
NI VYT + +Y ++TNDY+PTVISSGLMNTGFLPF QPVYIDYSP+G GTTVFD
Sbjct 493 NITVYTDNTMTTEVYHYSTNDYQPTVISSGLMNTGFLPFWNQPVYIDYSPAGTGTTVFDM 552
Query 557 P 557
P
Sbjct 553 P 553
>gi|308375739|ref|ZP_07668098.1| putative PE family protein [Mycobacterium tuberculosis SUMu007]
gi|308345294|gb|EFP34145.1| putative PE family protein [Mycobacterium tuberculosis SUMu007]
Length=208
Score = 219 bits (559), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 132/133 (99%), Positives = 133/133 (100%), Gaps = 0/133 (0%)
Query 1 VSFLVVVPEFLTSAAADVENIGSTLRAANAAAAASTTALAAAGADEVSAAVAALFARFGQ 60
+SFLVVVPEFLTSAAADVENIGSTLRAANAAAAASTTALAAAGADEVSAAVAALFARFGQ
Sbjct 1 MSFLVVVPEFLTSAAADVENIGSTLRAANAAAAASTTALAAAGADEVSAAVAALFARFGQ 60
Query 61 EYQAVSAQASAFHQQFVQTLNSASGSYAAAEATIASQLQTAQHDLLGAVNAPTETLLGRP 120
EYQAVSAQASAFHQQFVQTLNSASGSYAAAEATIASQLQTAQHDLLGAVNAPTETLLGRP
Sbjct 61 EYQAVSAQASAFHQQFVQTLNSASGSYAAAEATIASQLQTAQHDLLGAVNAPTETLLGRP 120
Query 121 LIGDGAPGTATSP 133
LIGDGAPGTATSP
Sbjct 121 LIGDGAPGTATSP 133
>gi|289750562|ref|ZP_06509940.1| PE-PGRS family protein [Mycobacterium tuberculosis T92]
gi|289691149|gb|EFD58578.1| PE-PGRS family protein [Mycobacterium tuberculosis T92]
Length=549
Score = 219 bits (557), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 132/133 (99%), Positives = 133/133 (100%), Gaps = 0/133 (0%)
Query 1 VSFLVVVPEFLTSAAADVENIGSTLRAANAAAAASTTALAAAGADEVSAAVAALFARFGQ 60
+SFLVVVPEFLTSAAADVENIGSTLRAANAAAAASTTALAAAGADEVSAAVAALFARFGQ
Sbjct 1 MSFLVVVPEFLTSAAADVENIGSTLRAANAAAAASTTALAAAGADEVSAAVAALFARFGQ 60
Query 61 EYQAVSAQASAFHQQFVQTLNSASGSYAAAEATIASQLQTAQHDLLGAVNAPTETLLGRP 120
EYQAVSAQASAFHQQFVQTLNSASGSYAAAEATIASQLQTAQHDLLGAVNAPTETLLGRP
Sbjct 61 EYQAVSAQASAFHQQFVQTLNSASGSYAAAEATIASQLQTAQHDLLGAVNAPTETLLGRP 120
Query 121 LIGDGAPGTATSP 133
LIGDGAPGTATSP
Sbjct 121 LIGDGAPGTATSP 133
>gi|118619532|ref|YP_907864.1| PE-PGRS family protein [Mycobacterium ulcerans Agy99]
gi|118571642|gb|ABL06393.1| PE-PGRS family protein [Mycobacterium ulcerans Agy99]
Length=480
Score = 182 bits (462), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 97/152 (64%), Positives = 116/152 (77%), Gaps = 0/152 (0%)
Query 1 VSFLVVVPEFLTSAAADVENIGSTLRAANAAAAASTTALAAAGADEVSAAVAALFARFGQ 60
+S+L+V PE LTSAA D+E I S L AN AAA TT + AAGADEVSAAVA+LFA +GQ
Sbjct 1 MSYLLVAPELLTSAATDLEGIASALSTANLAAAVPTTGMLAAGADEVSAAVASLFAGYGQ 60
Query 61 EYQAVSAQASAFHQQFVQTLNSASGSYAAAEATIASQLQTAQHDLLGAVNAPTETLLGRP 120
YQ++S QA+AF QF+Q +N A G+Y AAEA S LQ + +LG +NAPT+TLLGRP
Sbjct 61 AYQSISLQANAFQAQFIQAINGAGGAYVAAEAASTSPLQAFEDTVLGVINAPTQTLLGRP 120
Query 121 LIGDGAPGTATSPNGGAGGLLYGNGGNGYSAT 152
LIGDGA GT +PNGGAGG LYGNGGNG+S T
Sbjct 121 LIGDGAAGTVANPNGGAGGFLYGNGGNGFSQT 152
>gi|253799995|ref|YP_003032996.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 1435]
gi|253321498|gb|ACT26101.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 1435]
gi|328459737|gb|AEB05160.1| hypothetical protein TBSG_03031 [Mycobacterium tuberculosis KZN
4207]
Length=933
Score = 178 bits (452), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 129/291 (45%), Positives = 170/291 (59%), Gaps = 29/291 (9%)
Query 269 TVPLEIIHVTEPTVHANVNGGPTSTILVDTGSAGLVVSPEDVGGILGVLHMGLPTGLSIS 328
TVPL++++ TEP V ++NGG +L+DTGS GLV+ + + + G G +
Sbjct 668 TVPLQLVNTTEPVVFISLNGGQMVPVLLDTGSTGLVMDSQFL-----TQNFGPVIGTGTA 722
Query 329 GYSGGLYYIFATYTTTVDFGNGIVTAPTAVNVVLLSIPTSPFAISTYFSALLADPTTTPF 388
GY+GGL Y + TY+TTVDFGNG++T PT+VNVV S SP + + S
Sbjct 723 GYAGGLTYNYNTYSTTVDFGNGLLTLPTSVNVVTSS---SPGTLGNFLS----------- 768
Query 389 EAYFGAVGVDGVLGVGPNAVGPGPSIPTMALPGDLNQGVLIDAPAGELVFGPNPLPAPNV 448
G GVLG+GPN PG S A+PG LN GVLID AG L FGPN L +
Sbjct 769 -----RSGAVGVLGIGPNNGFPGTSSIVTAMPGLLNNGVLIDESAGILQFGPNTLTG-GI 822
Query 449 EVVGSPITTLYVKIDGGTPIPVPSIIDSGGVTGTIPSYVIGS---GTLPANTNIEVYTSP 505
+ G+PI+T+ V+ID G P + DSGG+ GTIPS + G +PA T I VYTS
Sbjct 823 TISGAPISTVAVQIDNGPLQQAPVMFDSGGINGTIPSALASLPSGGFVPAGTTISVYTSD 882
Query 506 GGDRLYAFNTNDYR-PTVISSGLMNTGFLPFRFQPVYIDYSPSGIGTTVFD 555
G LY++ T P V S G+MNTG +PF QP+Y+ YSP+ IGTT F+
Sbjct 883 GQTLLYSYTTTATNTPFVTSGGVMNTGHVPFAQQPIYVSYSPTAIGTTTFN 933
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/128 (54%), Positives = 87/128 (68%), Gaps = 1/128 (0%)
Query 1 VSFLVVVPEFLTSAAADVENIGSTLRAANAAAAASTTALAAAGADEVSAAVAALFARFGQ 60
+SF+V P L SAA+D+ I S + ANA AA TTALA A ADEVSAA+AALF+ + +
Sbjct 11 MSFVVTAPPVLASAASDLGGIASMISEANAMAAVRTTALAPAAADEVSAAIAALFSSYAR 70
Query 61 EYQAVSAQASAFHQQFVQTLNSASGSYAAAEATIASQLQTAQHDLLGAVNAPTETLLGRP 120
+YQ +S Q +AFH QF QTL +A YA + L+T Q +LG +NAPT+TL+GRP
Sbjct 71 DYQTLSVQVTAFHVQFAQTLTNAGQLYAVVDVGNGVLLKTEQQ-VLGVINAPTQTLVGRP 129
Query 121 LIGDGAPG 128
LIGDG G
Sbjct 130 LIGDGTHG 137
>gi|339293981|gb|AEJ46092.1| PE-PGRS family protein [Mycobacterium tuberculosis CCDC5079]
Length=923
Score = 178 bits (451), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 129/291 (45%), Positives = 170/291 (59%), Gaps = 29/291 (9%)
Query 269 TVPLEIIHVTEPTVHANVNGGPTSTILVDTGSAGLVVSPEDVGGILGVLHMGLPTGLSIS 328
TVPL++++ TEP V ++NGG +L+DTGS GLV+ + + + G G +
Sbjct 658 TVPLQLVNTTEPVVFISLNGGQMVPVLLDTGSTGLVMDSQFL-----TQNFGPVIGTGTA 712
Query 329 GYSGGLYYIFATYTTTVDFGNGIVTAPTAVNVVLLSIPTSPFAISTYFSALLADPTTTPF 388
GY+GGL Y + TY+TTVDFGNG++T PT+VNVV S SP + + S
Sbjct 713 GYAGGLTYNYNTYSTTVDFGNGLLTLPTSVNVVTSS---SPGTLGNFLS----------- 758
Query 389 EAYFGAVGVDGVLGVGPNAVGPGPSIPTMALPGDLNQGVLIDAPAGELVFGPNPLPAPNV 448
G GVLG+GPN PG S A+PG LN GVLID AG L FGPN L +
Sbjct 759 -----RSGAVGVLGIGPNNGFPGTSSIVTAMPGLLNNGVLIDESAGILQFGPNTLTG-GI 812
Query 449 EVVGSPITTLYVKIDGGTPIPVPSIIDSGGVTGTIPSYVIGS---GTLPANTNIEVYTSP 505
+ G+PI+T+ V+ID G P + DSGG+ GTIPS + G +PA T I VYTS
Sbjct 813 TISGAPISTVAVQIDNGPLQQAPVMFDSGGINGTIPSALASLPSGGFVPAGTTISVYTSD 872
Query 506 GGDRLYAFNTNDYR-PTVISSGLMNTGFLPFRFQPVYIDYSPSGIGTTVFD 555
G LY++ T P V S G+MNTG +PF QP+Y+ YSP+ IGTT F+
Sbjct 873 GQTLLYSYTTTATNTPFVTSGGVMNTGHVPFAQQPIYVSYSPTAIGTTTFN 923
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/128 (54%), Positives = 87/128 (68%), Gaps = 1/128 (0%)
Query 1 VSFLVVVPEFLTSAAADVENIGSTLRAANAAAAASTTALAAAGADEVSAAVAALFARFGQ 60
+SF+V P L SAA+D+ I S + ANA AA TTALA A ADEVSAA+AALF+ + +
Sbjct 1 MSFVVTAPPVLASAASDLGGIASMISEANAMAAVRTTALAPAAADEVSAAIAALFSSYAR 60
Query 61 EYQAVSAQASAFHQQFVQTLNSASGSYAAAEATIASQLQTAQHDLLGAVNAPTETLLGRP 120
+YQ +S Q +AFH QF QTL +A YA + L+T Q +LG +NAPT+TL+GRP
Sbjct 61 DYQTLSVQVTAFHVQFAQTLTNAGQLYAVVDVGNGVLLKTEQQ-VLGVINAPTQTLVGRP 119
Query 121 LIGDGAPG 128
LIGDG G
Sbjct 120 LIGDGTHG 127
>gi|31792166|ref|NP_854659.1| PE-PGRS family protein [Mycobacterium bovis AF2122/97]
gi|57116805|ref|YP_177773.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Rv]
gi|121636903|ref|YP_977126.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur
1173P2]
10 more sequence titles
Length=923
Score = 178 bits (451), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 129/291 (45%), Positives = 170/291 (59%), Gaps = 29/291 (9%)
Query 269 TVPLEIIHVTEPTVHANVNGGPTSTILVDTGSAGLVVSPEDVGGILGVLHMGLPTGLSIS 328
TVPL++++ TEP V ++NGG +L+DTGS GLV+ + + + G G +
Sbjct 658 TVPLQLVNTTEPVVFISLNGGQMVPVLLDTGSTGLVMDSQFL-----TQNFGPVIGTGTA 712
Query 329 GYSGGLYYIFATYTTTVDFGNGIVTAPTAVNVVLLSIPTSPFAISTYFSALLADPTTTPF 388
GY+GGL Y + TY+TTVDFGNG++T PT+VNVV S SP + + S
Sbjct 713 GYAGGLTYNYNTYSTTVDFGNGLLTLPTSVNVVTSS---SPGTLGNFLS----------- 758
Query 389 EAYFGAVGVDGVLGVGPNAVGPGPSIPTMALPGDLNQGVLIDAPAGELVFGPNPLPAPNV 448
G GVLG+GPN PG S A+PG LN GVLID AG L FGPN L +
Sbjct 759 -----RSGAVGVLGIGPNNGFPGTSSIVTAMPGLLNNGVLIDESAGILQFGPNTLTG-GI 812
Query 449 EVVGSPITTLYVKIDGGTPIPVPSIIDSGGVTGTIPSYVIGS---GTLPANTNIEVYTSP 505
+ G+PI+T+ V+ID G P + DSGG+ GTIPS + G +PA T I VYTS
Sbjct 813 TISGAPISTVAVQIDNGPLQQAPVMFDSGGINGTIPSALASLPSGGFVPAGTTISVYTSD 872
Query 506 GGDRLYAFNTNDYR-PTVISSGLMNTGFLPFRFQPVYIDYSPSGIGTTVFD 555
G LY++ T P V S G+MNTG +PF QP+Y+ YSP+ IGTT F+
Sbjct 873 GQTLLYSYTTTATNTPFVTSGGVMNTGHVPFAQQPIYVSYSPTAIGTTTFN 923
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/128 (54%), Positives = 87/128 (68%), Gaps = 1/128 (0%)
Query 1 VSFLVVVPEFLTSAAADVENIGSTLRAANAAAAASTTALAAAGADEVSAAVAALFARFGQ 60
+SF+V P L SAA+D+ I S + ANA AA TTALA A ADEVSAA+AALF+ + +
Sbjct 1 MSFVVTAPPVLASAASDLGGIASMISEANAMAAVRTTALAPAAADEVSAAIAALFSSYAR 60
Query 61 EYQAVSAQASAFHQQFVQTLNSASGSYAAAEATIASQLQTAQHDLLGAVNAPTETLLGRP 120
+YQ +S Q +AFH QF QTL +A YA + L+T Q +LG +NAPT+TL+GRP
Sbjct 61 DYQTLSVQVTAFHVQFAQTLTNAGQLYAVVDVGNGVLLKTEQQ-VLGVINAPTQTLVGRP 119
Query 121 LIGDGAPG 128
LIGDG G
Sbjct 120 LIGDGTHG 127
>gi|148660757|ref|YP_001282280.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra]
gi|148504909|gb|ABQ72718.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra]
Length=923
Score = 178 bits (451), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 129/291 (45%), Positives = 170/291 (59%), Gaps = 29/291 (9%)
Query 269 TVPLEIIHVTEPTVHANVNGGPTSTILVDTGSAGLVVSPEDVGGILGVLHMGLPTGLSIS 328
TVPL++++ TEP V ++NGG +L+DTGS GLV+ + + + G G +
Sbjct 658 TVPLQLVNTTEPVVFISLNGGQMVPVLLDTGSTGLVMDSQFL-----TQNFGPVIGTGTA 712
Query 329 GYSGGLYYIFATYTTTVDFGNGIVTAPTAVNVVLLSIPTSPFAISTYFSALLADPTTTPF 388
GY+GGL Y + TY+TTVDFGNG++T PT+VNVV S SP + + S
Sbjct 713 GYAGGLTYNYNTYSTTVDFGNGLLTLPTSVNVVTSS---SPGTLGNFLS----------- 758
Query 389 EAYFGAVGVDGVLGVGPNAVGPGPSIPTMALPGDLNQGVLIDAPAGELVFGPNPLPAPNV 448
G GVLG+GPN PG S A+PG LN GVLID AG L FGPN L +
Sbjct 759 -----RSGAVGVLGIGPNNGFPGTSSIVTAMPGLLNNGVLIDESAGILQFGPNTLTG-GI 812
Query 449 EVVGSPITTLYVKIDGGTPIPVPSIIDSGGVTGTIPSYVIGS---GTLPANTNIEVYTSP 505
+ G+PI+T+ V+ID G P + DSGG+ GTIPS + G +PA T I VYTS
Sbjct 813 TISGAPISTVAVQIDNGPLQQAPVMFDSGGINGTIPSALASLPSGGFVPAGTTISVYTSD 872
Query 506 GGDRLYAFNTNDYR-PTVISSGLMNTGFLPFRFQPVYIDYSPSGIGTTVFD 555
G LY++ T P V S G+MNTG +PF QP+Y+ YSP+ IGTT F+
Sbjct 873 GQTLLYSYTTTATNTPFVTSGGVMNTGHVPFAQQPIYVSYSPTAIGTTTFN 923
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/128 (54%), Positives = 87/128 (68%), Gaps = 1/128 (0%)
Query 1 VSFLVVVPEFLTSAAADVENIGSTLRAANAAAAASTTALAAAGADEVSAAVAALFARFGQ 60
+SF+V P L SAA+D+ I S + ANA AA TTALA A ADEVSAA+AALF+ + +
Sbjct 1 MSFVVTAPPVLASAASDLGGIASMISEANAMAAVRTTALAPAAADEVSAAIAALFSSYAR 60
Query 61 EYQAVSAQASAFHQQFVQTLNSASGSYAAAEATIASQLQTAQHDLLGAVNAPTETLLGRP 120
+YQ +S Q +AFH QF QTL +A YA + L+T Q +LG +NAPT+TL+GRP
Sbjct 61 DYQTLSVQVTAFHVQFAQTLTNAGQLYAVVDVGNGVLLKTEQQ-VLGVINAPTQTLVGRP 119
Query 121 LIGDGAPG 128
LIGDG G
Sbjct 120 LIGDGTHG 127
>gi|340625989|ref|YP_004744441.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
gi|340004179|emb|CCC43318.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
Length=1081
Score = 177 bits (450), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 129/291 (45%), Positives = 170/291 (59%), Gaps = 29/291 (9%)
Query 269 TVPLEIIHVTEPTVHANVNGGPTSTILVDTGSAGLVVSPEDVGGILGVLHMGLPTGLSIS 328
TVPL++++ TEP V ++NGG +L+DTGS GLV+ + + + G G +
Sbjct 816 TVPLQLVNTTEPVVFISLNGGQMVPVLLDTGSTGLVMDSQFL-----TQNFGPVIGTGTA 870
Query 329 GYSGGLYYIFATYTTTVDFGNGIVTAPTAVNVVLLSIPTSPFAISTYFSALLADPTTTPF 388
GY+GGL Y + TY+TTVDFGNG++T PT+VNVV S SP + + S
Sbjct 871 GYAGGLTYNYNTYSTTVDFGNGLLTLPTSVNVVTSS---SPGTLGNFLS----------- 916
Query 389 EAYFGAVGVDGVLGVGPNAVGPGPSIPTMALPGDLNQGVLIDAPAGELVFGPNPLPAPNV 448
G GVLG+GPN PG S A+PG LN GVLID AG L FGPN L +
Sbjct 917 -----RSGAVGVLGIGPNNGFPGTSSIVTAMPGLLNNGVLIDESAGILQFGPNTLTG-GI 970
Query 449 EVVGSPITTLYVKIDGGTPIPVPSIIDSGGVTGTIPSYVIGS---GTLPANTNIEVYTSP 505
+ G+PI+T+ V+ID G P + DSGG+ GTIPS + G +PA T I VYTS
Sbjct 971 TISGAPISTVAVQIDNGPLQQAPVMFDSGGINGTIPSALASLPSGGFVPAGTTISVYTSD 1030
Query 506 GGDRLYAFNTNDYR-PTVISSGLMNTGFLPFRFQPVYIDYSPSGIGTTVFD 555
G LY++ T P V S G+MNTG +PF QP+Y+ YSP+ IGTT F+
Sbjct 1031 GQTLLYSYTTTATNTPFVTSGGVMNTGHVPFAQQPIYVSYSPTAIGTTTFN 1081
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/128 (55%), Positives = 88/128 (69%), Gaps = 1/128 (0%)
Query 1 VSFLVVVPEFLTSAAADVENIGSTLRAANAAAAASTTALAAAGADEVSAAVAALFARFGQ 60
+SF+V P L SAA+D+ I S + ANA AA TTALA A ADEVSAA+AALF+ + +
Sbjct 1 MSFVVTAPPVLASAASDLGGIASMISEANAMAAVRTTALAPAAADEVSAAIAALFSSYAR 60
Query 61 EYQAVSAQASAFHQQFVQTLNSASGSYAAAEATIASQLQTAQHDLLGAVNAPTETLLGRP 120
+YQ +S Q +AFH QFVQTL +A YA + L+T Q +LG +NAPT+TLLGRP
Sbjct 61 DYQTLSVQVTAFHVQFVQTLTNAGQLYAVVDVGNGVLLKTEQQ-VLGVINAPTQTLLGRP 119
Query 121 LIGDGAPG 128
LIGDG G
Sbjct 120 LIGDGTHG 127
>gi|289446553|ref|ZP_06436297.1| PE-PGRS family protein [Mycobacterium tuberculosis CPHL_A]
gi|289419511|gb|EFD16712.1| PE-PGRS family protein [Mycobacterium tuberculosis CPHL_A]
Length=496
Score = 177 bits (448), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 129/291 (45%), Positives = 170/291 (59%), Gaps = 29/291 (9%)
Query 269 TVPLEIIHVTEPTVHANVNGGPTSTILVDTGSAGLVVSPEDVGGILGVLHMGLPTGLSIS 328
TVPL++++ TEP V ++NGG +L+DTGS GLV+ + + + G G +
Sbjct 231 TVPLQLVNTTEPVVFISLNGGQMVPVLLDTGSTGLVMDSQFL-----TQNFGPVIGTGTA 285
Query 329 GYSGGLYYIFATYTTTVDFGNGIVTAPTAVNVVLLSIPTSPFAISTYFSALLADPTTTPF 388
GY+GGL Y + TY+TTVDFGNG++T PT+VNVV S SP + + S
Sbjct 286 GYAGGLTYNYNTYSTTVDFGNGLLTLPTSVNVVTSS---SPGTLGNFLS----------- 331
Query 389 EAYFGAVGVDGVLGVGPNAVGPGPSIPTMALPGDLNQGVLIDAPAGELVFGPNPLPAPNV 448
G GVLG+GPN PG S A+PG LN GVLID AG L FGPN L +
Sbjct 332 -----RSGAVGVLGIGPNNGFPGTSSIVTAMPGLLNNGVLIDESAGILQFGPNTLTG-GI 385
Query 449 EVVGSPITTLYVKIDGGTPIPVPSIIDSGGVTGTIPSYVIGS---GTLPANTNIEVYTSP 505
+ G+PI+T+ V+ID G P + DSGG+ GTIPS + G +PA T I VYTS
Sbjct 386 TISGAPISTVAVQIDNGPLQQAPVMFDSGGINGTIPSALASLPSGGFVPAGTTISVYTSD 445
Query 506 GGDRLYAFNTN-DYRPTVISSGLMNTGFLPFRFQPVYIDYSPSGIGTTVFD 555
G LY++ T P V S G+MNTG +PF QP+Y+ YSP+ IGTT F+
Sbjct 446 GQTLLYSYTTTATNTPFVTSGGVMNTGHVPFAQQPIYVSYSPTAIGTTTFN 496
>gi|224989375|ref|YP_002644062.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|224772488|dbj|BAH25294.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172]
Length=440
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 129/291 (45%), Positives = 170/291 (59%), Gaps = 29/291 (9%)
Query 269 TVPLEIIHVTEPTVHANVNGGPTSTILVDTGSAGLVVSPEDVGGILGVLHMGLPTGLSIS 328
TVPL++++ TEP V ++NGG +L+DTGS GLV+ + + + G G +
Sbjct 175 TVPLQLVNTTEPVVFISLNGGQMVPVLLDTGSTGLVMDSQFL-----TQNFGPVIGTGTA 229
Query 329 GYSGGLYYIFATYTTTVDFGNGIVTAPTAVNVVLLSIPTSPFAISTYFSALLADPTTTPF 388
GY+GGL Y + TY+TTVDFGNG++T PT+VNVV S SP + + S
Sbjct 230 GYAGGLTYNYNTYSTTVDFGNGLLTLPTSVNVVTSS---SPGTLGNFLS----------- 275
Query 389 EAYFGAVGVDGVLGVGPNAVGPGPSIPTMALPGDLNQGVLIDAPAGELVFGPNPLPAPNV 448
G GVLG+GPN PG S A+PG LN GVLID AG L FGPN L +
Sbjct 276 -----RSGAVGVLGIGPNNGFPGTSSIVTAMPGLLNNGVLIDESAGILQFGPNTLTG-GI 329
Query 449 EVVGSPITTLYVKIDGGTPIPVPSIIDSGGVTGTIPSYVIGS---GTLPANTNIEVYTSP 505
+ G+PI+T+ V+ID G P + DSGG+ GTIPS + G +PA T I VYTS
Sbjct 330 TISGAPISTVAVQIDNGPLQQAPVMFDSGGINGTIPSALASLPSGGFVPAGTTISVYTSD 389
Query 506 GGDRLYAFNTN-DYRPTVISSGLMNTGFLPFRFQPVYIDYSPSGIGTTVFD 555
G LY++ T P V S G+MNTG +PF QP+Y+ YSP+ IGTT F+
Sbjct 390 GQTLLYSYTTTATNTPFVTSGGVMNTGHVPFAQQPIYVSYSPTAIGTTTFN 440
>gi|183983189|ref|YP_001851480.1| PE-PGRS family protein [Mycobacterium marinum M]
gi|183176515|gb|ACC41625.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=597
Score = 172 bits (436), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 99/153 (65%), Positives = 117/153 (77%), Gaps = 0/153 (0%)
Query 1 VSFLVVVPEFLTSAAADVENIGSTLRAANAAAAASTTALAAAGADEVSAAVAALFARFGQ 60
+SF+ V E L +AA+DV IGS+L+AAN AAA T + AAGADEVS A+AALF+ GQ
Sbjct 1 MSFVSVTQEALAAAASDVGVIGSSLQAANVVAAAPTAGVLAAGADEVSVAMAALFSGHGQ 60
Query 61 EYQAVSAQASAFHQQFVQTLNSASGSYAAAEATIASQLQTAQHDLLGAVNAPTETLLGRP 120
YQA+SAQA+AFH QF+Q L +A G+YAAAE S LQ + +LGAVNAPT+ LLGRP
Sbjct 61 AYQALSAQANAFHAQFLQALTNAGGAYAAAEVANVSPLQGVEQGVLGAVNAPTQALLGRP 120
Query 121 LIGDGAPGTATSPNGGAGGLLYGNGGNGYSATA 153
LIGDG GTA SPNGGAGGLLYGNGG GYS T+
Sbjct 121 LIGDGTAGTAASPNGGAGGLLYGNGGAGYSYTS 153
>gi|289555241|ref|ZP_06444451.1| LOW QUALITY PROTEIN: predicted protein [Mycobacterium tuberculosis
KZN 605]
gi|289439873|gb|EFD22366.1| LOW QUALITY PROTEIN: predicted protein [Mycobacterium tuberculosis
KZN 605]
Length=417
Score = 170 bits (430), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 135/334 (41%), Positives = 178/334 (54%), Gaps = 55/334 (16%)
Query 226 GANGGAGGLGDGVGVDRGTGGAGGRGGLLYGGYGVSGPGGDGRTVPLEIIHVTEPTVHAN 285
G NG GG+G + TVPL++++ TEP V +
Sbjct 135 GLNGATGGIGSTTLTN--------------------------ATVPLQLVNTTEPVVFIS 168
Query 286 VNGGPTSTILVDTGSAGLVVSPEDVGGILGVLHMGLPTGLSISGYSGGLYYIFATYTTTV 345
+NGG +L+DTGS GLV+ + + + G G +GY+GGL Y + TY+TTV
Sbjct 169 LNGGQMVPVLLDTGSTGLVMDSQFL-----TQNFGPVIGTGTAGYAGGLTYNYNTYSTTV 223
Query 346 DFGNGIVTAPTAVNVVLLSIPTSPFAISTYFSALLADPTTTPFEAYFGAVGVDGVLGVGP 405
DFGNG++T PT+VNVV S SP + + S G GVLG+GP
Sbjct 224 DFGNGLLTLPTSVNVVTSS---SPGTLGNFLS----------------RSGAVGVLGIGP 264
Query 406 NAVGPGPSIPTMALPGDLNQGVLIDAPAGELVFGPNPLPAPNVEVVGSPITTLYVKIDGG 465
N PG S A+PG LN GVLID AG L FGPN L + + G+PI+T+ V+ID G
Sbjct 265 NNGFPGTSSIVTAMPGLLNNGVLIDESAGILQFGPNTLTG-GITISGAPISTVAVQIDNG 323
Query 466 TPIPVPSIIDSGGVTGTIPSYVIGS---GTLPANTNIEVYTSPGGDRLYAFNTN-DYRPT 521
P + DSGG+ GTIPS + G +PA T I VYTS G LY++ T P
Sbjct 324 PLQQAPVMFDSGGINGTIPSALASLPSGGFVPAGTTISVYTSDGQTLLYSYTTTATNTPF 383
Query 522 VISSGLMNTGFLPFRFQPVYIDYSPSGIGTTVFD 555
V S G+MNTG +PF QP+Y+ YSP+ IGTT F+
Sbjct 384 VTSGGVMNTGHVPFAQQPIYVSYSPTAIGTTTFN 417
>gi|118618801|ref|YP_907133.1| PE-PGRS family protein [Mycobacterium ulcerans Agy99]
gi|118570911|gb|ABL05662.1| PE-PGRS family protein [Mycobacterium ulcerans Agy99]
Length=605
Score = 166 bits (420), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 96/153 (63%), Positives = 115/153 (76%), Gaps = 0/153 (0%)
Query 1 VSFLVVVPEFLTSAAADVENIGSTLRAANAAAAASTTALAAAGADEVSAAVAALFARFGQ 60
+SF+ V E L +AA+DV IGS+L+AAN + AA T + AAGADEVS A+AALF+ GQ
Sbjct 1 MSFVSVTQEALAAAASDVGVIGSSLQAANMSVAAPTAGVLAAGADEVSVAMAALFSGHGQ 60
Query 61 EYQAVSAQASAFHQQFVQTLNSASGSYAAAEATIASQLQTAQHDLLGAVNAPTETLLGRP 120
YQ +SAQA+AFH QF+Q L +A G+YAAAE S LQ + +LG VNAP + LLGRP
Sbjct 61 AYQTLSAQANAFHAQFLQALTNAGGAYAAAEVANLSPLQGVEQGVLGVVNAPAQALLGRP 120
Query 121 LIGDGAPGTATSPNGGAGGLLYGNGGNGYSATA 153
LIGDGA GTA SPNGGAGGLLYGNGG GYS T+
Sbjct 121 LIGDGAAGTAASPNGGAGGLLYGNGGAGYSYTS 153
>gi|183985289|ref|YP_001853580.1| PE-PGRS family protein [Mycobacterium marinum M]
gi|183178615|gb|ACC43725.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=723
Score = 166 bits (419), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 99/152 (66%), Positives = 118/152 (78%), Gaps = 0/152 (0%)
Query 1 VSFLVVVPEFLTSAAADVENIGSTLRAANAAAAASTTALAAAGADEVSAAVAALFARFGQ 60
+S+L+V PE LTSAA D+E I S L AN AAA TT + AAGADEVSAAVA+LFA +GQ
Sbjct 1 MSYLLVTPELLTSAATDLEGIASALSTANLAAAVPTTGVLAAGADEVSAAVASLFAGYGQ 60
Query 61 EYQAVSAQASAFHQQFVQTLNSASGSYAAAEATIASQLQTAQHDLLGAVNAPTETLLGRP 120
YQ++S QA+AF QF+Q +N A G+YAAAEA S LQ + +LG +NAPT+TLLGRP
Sbjct 61 AYQSISLQANAFQAQFIQAINGAGGAYAAAEAASTSPLQAFEDTVLGVINAPTQTLLGRP 120
Query 121 LIGDGAPGTATSPNGGAGGLLYGNGGNGYSAT 152
LIGDGA GTA +PNGGAGG LYGNGGNG+S T
Sbjct 121 LIGDGAAGTAANPNGGAGGFLYGNGGNGFSQT 152
>gi|240172373|ref|ZP_04751032.1| PE-PGRS family protein [Mycobacterium kansasii ATCC 12478]
Length=534
Score = 156 bits (395), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 111/154 (73%), Positives = 121/154 (79%), Gaps = 0/154 (0%)
Query 1 VSFLVVVPEFLTSAAADVENIGSTLRAANAAAAASTTALAAAGADEVSAAVAALFARFGQ 60
+S LVV PE + SAAAD+E++ S L AANAAAA TT LAAAG DEVSAAVA LFA FGQ
Sbjct 1 MSLLVVAPEIVASAAADLESLYSALNAANAAAAGPTTVLAAAGIDEVSAAVATLFAGFGQ 60
Query 61 EYQAVSAQASAFHQQFVQTLNSASGSYAAAEATIASQLQTAQHDLLGAVNAPTETLLGRP 120
EYQ +S QA+ F QQFV TLNS+ G+Y A EA S LQTAQ DLLGAVNAPT LLGRP
Sbjct 61 EYQVLSTQANTFFQQFVATLNSSGGTYQAGEAQAVSLLQTAQSDLLGAVNAPTLALLGRP 120
Query 121 LIGDGAPGTATSPNGGAGGLLYGNGGNGYSATAS 154
LIGDGA GT +SPNG AGGLL GNGGNGYS TAS
Sbjct 121 LIGDGAHGTVSSPNGAAGGLLLGNGGNGYSQTAS 154
>gi|183982972|ref|YP_001851263.1| PE-PGRS family protein [Mycobacterium marinum M]
gi|183176298|gb|ACC41408.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=609
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 96/153 (63%), Positives = 119/153 (78%), Gaps = 0/153 (0%)
Query 1 VSFLVVVPEFLTSAAADVENIGSTLRAANAAAAASTTALAAAGADEVSAAVAALFARFGQ 60
+++LV VP+ + +AA ++ IGS++ A+AAAAA TT LAAAGADE+SAA+A LF Q
Sbjct 1 MTYLVTVPQTVATAAGNLAAIGSSITDASAAAAAPTTELAAAGADEISAAIAQLFGTHAQ 60
Query 61 EYQAVSAQASAFHQQFVQTLNSASGSYAAAEATIASQLQTAQHDLLGAVNAPTETLLGRP 120
YQ +SAQA AFH QF ++L++ASGSYA AEAT LQ+ Q DLLG VNAPT+ LLGRP
Sbjct 61 IYQRISAQAMAFHDQFARSLSAASGSYANAEATNTLTLQSVQQDLLGLVNAPTQALLGRP 120
Query 121 LIGDGAPGTATSPNGGAGGLLYGNGGNGYSATA 153
LIG+GA GTA PNG AGGLLYGNGG+GYS T+
Sbjct 121 LIGNGANGTAADPNGEAGGLLYGNGGDGYSFTS 153
>gi|183982127|ref|YP_001850418.1| PE-PGRS family protein [Mycobacterium marinum M]
gi|183175453|gb|ACC40563.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=546
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 93/150 (62%), Positives = 121/150 (81%), Gaps = 0/150 (0%)
Query 1 VSFLVVVPEFLTSAAADVENIGSTLRAANAAAAASTTALAAAGADEVSAAVAALFARFGQ 60
++F++ PE +++AA +V +IG++L AANAA AASTT++ +AGAD+VS A+AAL + G
Sbjct 1 MAFVIAAPELVSAAAENVASIGTSLGAANAAVAASTTSVLSAGADDVSQAIAALLSSHGA 60
Query 61 EYQAVSAQASAFHQQFVQTLNSASGSYAAAEATIASQLQTAQHDLLGAVNAPTETLLGRP 120
+YQA+SAQA+ FHQ F+Q LNSA G+YA AEA S LQT + ++LGA+N PT+ + GRP
Sbjct 61 QYQALSAQAAQFHQGFMQLLNSAGGAYAGAEAANVSPLQTLESNVLGALNTPTQAIFGRP 120
Query 121 LIGDGAPGTATSPNGGAGGLLYGNGGNGYS 150
LIGDGA GTATSPNGGAGG LYGNGGNGYS
Sbjct 121 LIGDGANGTATSPNGGAGGFLYGNGGNGYS 150
>gi|289448241|ref|ZP_06437985.1| PE-PGRS family protein [Mycobacterium tuberculosis CPHL_A]
gi|289421199|gb|EFD18400.1| PE-PGRS family protein [Mycobacterium tuberculosis CPHL_A]
Length=540
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 98/163 (61%), Positives = 124/163 (77%), Gaps = 1/163 (0%)
Query 1 VSFLVVVPEFLTSAAADVENIGSTLRAANAAAAASTTALAAAGADEVSAAVAALFARFGQ 60
+SF+ PE L +AA +V NIG++L AANA AAASTT++ AAGADEVS A+A LF+ +
Sbjct 1 MSFVTAAPEMLATAAQNVANIGTSLSAANATAAASTTSVLAAGADEVSQAIARLFSDYAT 60
Query 61 EYQAVSAQASAFHQQFVQTLNSASGSYAAAEATIASQLQTAQHDLLGAVNAPTETLLGRP 120
YQ+++AQA+AFH FVQTLN+A G+Y++AEA AS Q +LL +NAP + L GRP
Sbjct 61 HYQSLNAQAAAFHHSFVQTLNAAGGAYSSAEAANASAQALEQ-NLLAVINAPAQALFGRP 119
Query 121 LIGDGAPGTATSPNGGAGGLLYGNGGNGYSATASGVGGGAGGS 163
LIG+GA GTA SPNGG GG+LYGNGGNG+S T +GV GGA GS
Sbjct 120 LIGNGANGTAASPNGGDGGILYGNGGNGFSQTTAGVAGGASGS 162
>gi|183982126|ref|YP_001850417.1| PE-PGRS family protein [Mycobacterium marinum M]
gi|183175452|gb|ACC40562.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=577
Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 94/152 (62%), Positives = 117/152 (77%), Gaps = 0/152 (0%)
Query 1 VSFLVVVPEFLTSAAADVENIGSTLRAANAAAAASTTALAAAGADEVSAAVAALFARFGQ 60
++F+ PE +++AA DV NIG++L AANAA AA TT++ AAG DEVS A+A + G
Sbjct 1 MAFVFATPELVSAAAQDVANIGTSLGAANAAVAAPTTSVLAAGGDEVSHAIATMLRNHGA 60
Query 61 EYQAVSAQASAFHQQFVQTLNSASGSYAAAEATIASQLQTAQHDLLGAVNAPTETLLGRP 120
+YQA+SAQ + HQ+ VQ LNSASG+YA+AEA AS LQT + +L AVN PT+ L GRP
Sbjct 61 QYQALSAQGAQVHQRIVQLLNSASGAYASAEAANASPLQTLESTVLDAVNTPTQALFGRP 120
Query 121 LIGDGAPGTATSPNGGAGGLLYGNGGNGYSAT 152
LIG+GA GTATSPNGGAGG+LYGNGGNGYS T
Sbjct 121 LIGNGANGTATSPNGGAGGILYGNGGNGYSFT 152
>gi|118617342|ref|YP_905674.1| PE-PGRS family protein [Mycobacterium ulcerans Agy99]
gi|118569452|gb|ABL04203.1| PE-PGRS family protein [Mycobacterium ulcerans Agy99]
Length=482
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 91/150 (61%), Positives = 119/150 (80%), Gaps = 0/150 (0%)
Query 1 VSFLVVVPEFLTSAAADVENIGSTLRAANAAAAASTTALAAAGADEVSAAVAALFARFGQ 60
++F++ PE +++AA +V +IG++L AANAA AASTT++ +AGAD+VS A AAL + G
Sbjct 1 MAFVIAAPELVSAAAENVASIGTSLGAANAAVAASTTSVLSAGADDVSQAFAALLSSHGA 60
Query 61 EYQAVSAQASAFHQQFVQTLNSASGSYAAAEATIASQLQTAQHDLLGAVNAPTETLLGRP 120
+YQA+SAQA+ FHQ +Q LNSA G+YA AEA S LQT + +++GA+N PT+ + GRP
Sbjct 61 QYQALSAQAAQFHQGLMQLLNSAGGAYAGAEAANVSPLQTLESNVVGALNTPTQAIFGRP 120
Query 121 LIGDGAPGTATSPNGGAGGLLYGNGGNGYS 150
LIGDGA GTATSPNGGAGG LYGNGGNGYS
Sbjct 121 LIGDGANGTATSPNGGAGGFLYGNGGNGYS 150
>gi|183985067|ref|YP_001853358.1| PE-PGRS family protein [Mycobacterium marinum M]
gi|183178393|gb|ACC43503.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=456
Score = 139 bits (351), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 81/152 (54%), Positives = 105/152 (70%), Gaps = 0/152 (0%)
Query 3 FLVVVPEFLTSAAADVENIGSTLRAANAAAAASTTALAAAGADEVSAAVAALFARFGQEY 62
+ PE + +AA D+ IGS + AN AAAA TT + AAGADEVS VA+LF+R+ Q Y
Sbjct 3 LVFATPEIIAAAATDLAQIGSAISGANTAAAAPTTEVLAAGADEVSTVVASLFSRYAQAY 62
Query 63 QAVSAQASAFHQQFVQTLNSASGSYAAAEATIASQLQTAQHDLLGAVNAPTETLLGRPLI 122
Q + A +A H QFVQ LN+ + YA E+ +S LQT Q D+LG +NAPT+ LLGR LI
Sbjct 63 QVLGADMAAIHDQFVQALNAGANWYAGVESANSSTLQTVQQDVLGLINAPTQALLGRGLI 122
Query 123 GDGAPGTATSPNGGAGGLLYGNGGNGYSATAS 154
GDGA GTA+ P+G GG LYG+GG+GY++ S
Sbjct 123 GDGAAGTASHPDGYDGGFLYGSGGSGYNSATS 154
>gi|289575300|ref|ZP_06455527.1| PE-PGRS family protein [Mycobacterium tuberculosis K85]
gi|289539731|gb|EFD44309.1| PE-PGRS family protein [Mycobacterium tuberculosis K85]
Length=324
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 91/152 (60%), Positives = 116/152 (77%), Gaps = 1/152 (0%)
Query 1 VSFLVVVPEFLTSAAADVENIGSTLRAANAAAAASTTALAAAGADEVSAAVAALFARFGQ 60
+SF+ PE L +AA +V NIG++L AANA AAASTT++ AAGADEVS A+A LF+ +
Sbjct 11 MSFVTAAPEMLATAAQNVANIGTSLSAANATAAASTTSVLAAGADEVSQAIARLFSDYAT 70
Query 61 EYQAVSAQASAFHQQFVQTLNSASGSYAAAEATIASQLQTAQHDLLGAVNAPTETLLGRP 120
YQ+++AQA+AFH FVQTLN+A G+Y++AEA AS Q +LL +NAP + L GRP
Sbjct 71 HYQSLNAQAAAFHHSFVQTLNAAGGAYSSAEAANASAQALEQ-NLLAVINAPAQALFGRP 129
Query 121 LIGDGAPGTATSPNGGAGGLLYGNGGNGYSAT 152
LIG+GA GTA SPNGG GG+LYGNGGNG+S T
Sbjct 130 LIGNGANGTAASPNGGDGGILYGNGGNGFSQT 161
>gi|148662430|ref|YP_001283953.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra]
gi|253798327|ref|YP_003031328.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 1435]
gi|148506582|gb|ABQ74391.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra]
gi|253319830|gb|ACT24433.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 1435]
gi|328458097|gb|AEB03520.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 4207]
Length=553
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 91/152 (60%), Positives = 116/152 (77%), Gaps = 1/152 (0%)
Query 1 VSFLVVVPEFLTSAAADVENIGSTLRAANAAAAASTTALAAAGADEVSAAVAALFARFGQ 60
+SF+ PE L +AA +V NIG++L AANA AAASTT++ AAGADEVS A+A LF+ +
Sbjct 11 MSFVTAAPEMLATAAQNVANIGTSLSAANATAAASTTSVLAAGADEVSQAIARLFSDYAT 70
Query 61 EYQAVSAQASAFHQQFVQTLNSASGSYAAAEATIASQLQTAQHDLLGAVNAPTETLLGRP 120
YQ+++AQA+AFH FVQTLN+A G+Y++AEA AS Q +LL +NAP + L GRP
Sbjct 71 HYQSLNAQAAAFHHSFVQTLNAAGGAYSSAEAANASAQALEQ-NLLAVINAPAQALFGRP 129
Query 121 LIGDGAPGTATSPNGGAGGLLYGNGGNGYSAT 152
LIG+GA GTA SPNGG GG+LYGNGGNG+S T
Sbjct 130 LIGNGANGTAASPNGGDGGILYGNGGNGFSQT 161
>gi|289570762|ref|ZP_06450989.1| PE-PGRS family protein [Mycobacterium tuberculosis T17]
gi|289544516|gb|EFD48164.1| PE-PGRS family protein [Mycobacterium tuberculosis T17]
Length=545
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 91/152 (60%), Positives = 116/152 (77%), Gaps = 1/152 (0%)
Query 1 VSFLVVVPEFLTSAAADVENIGSTLRAANAAAAASTTALAAAGADEVSAAVAALFARFGQ 60
+SF+ PE L +AA +V NIG++L AANA AAASTT++ AAGADEVS A+A LF+ +
Sbjct 1 MSFVTAAPEMLATAAQNVANIGTSLSAANATAAASTTSVLAAGADEVSQAIARLFSDYAT 60
Query 61 EYQAVSAQASAFHQQFVQTLNSASGSYAAAEATIASQLQTAQHDLLGAVNAPTETLLGRP 120
YQ+++AQA+AFH FVQTLN+A G+Y++AEA AS Q +LL +NAP + L GRP
Sbjct 61 HYQSLNAQAAAFHHSFVQTLNAAGGAYSSAEAANASAQALEQ-NLLAVINAPAQALFGRP 119
Query 121 LIGDGAPGTATSPNGGAGGLLYGNGGNGYSAT 152
LIG+GA GTA SPNGG GG+LYGNGGNG+S T
Sbjct 120 LIGNGANGTAASPNGGDGGILYGNGGNGFSQT 151
>gi|297635201|ref|ZP_06952981.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 4207]
Length=543
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 91/152 (60%), Positives = 116/152 (77%), Gaps = 1/152 (0%)
Query 1 VSFLVVVPEFLTSAAADVENIGSTLRAANAAAAASTTALAAAGADEVSAAVAALFARFGQ 60
+SF+ PE L +AA +V NIG++L AANA AAASTT++ AAGADEVS A+A LF+ +
Sbjct 1 MSFVTAAPEMLATAAQNVANIGTSLSAANATAAASTTSVLAAGADEVSQAIARLFSDYAT 60
Query 61 EYQAVSAQASAFHQQFVQTLNSASGSYAAAEATIASQLQTAQHDLLGAVNAPTETLLGRP 120
YQ+++AQA+AFH FVQTLN+A G+Y++AEA AS Q +LL +NAP + L GRP
Sbjct 61 HYQSLNAQAAAFHHSFVQTLNAAGGAYSSAEAANASAQALEQ-NLLAVINAPAQALFGRP 119
Query 121 LIGDGAPGTATSPNGGAGGLLYGNGGNGYSAT 152
LIG+GA GTA SPNGG GG+LYGNGGNG+S T
Sbjct 120 LIGNGANGTAASPNGGDGGILYGNGGNGFSQT 151
>gi|294994300|ref|ZP_06799991.1| PE-PGRS family protein [Mycobacterium tuberculosis 210]
Length=543
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 91/152 (60%), Positives = 116/152 (77%), Gaps = 1/152 (0%)
Query 1 VSFLVVVPEFLTSAAADVENIGSTLRAANAAAAASTTALAAAGADEVSAAVAALFARFGQ 60
+SF+ PE L +AA +V NIG++L AANA AAASTT++ AAGADEVS A+A LF+ +
Sbjct 1 MSFVTAAPEMLATAAQNVANIGTSLSAANATAAASTTSVLAAGADEVSQAIARLFSDYAT 60
Query 61 EYQAVSAQASAFHQQFVQTLNSASGSYAAAEATIASQLQTAQHDLLGAVNAPTETLLGRP 120
YQ+++AQA+AFH FVQTLN+A G+Y++AEA AS Q +LL +NAP + L GRP
Sbjct 61 HYQSLNAQAAAFHHSFVQTLNAAGGAYSSAEAANASAQALEQ-NLLAVINAPAQALFGRP 119
Query 121 LIGDGAPGTATSPNGGAGGLLYGNGGNGYSAT 152
LIG+GA GTA SPNGG GG+LYGNGGNG+S T
Sbjct 120 LIGNGANGTAASPNGGDGGILYGNGGNGFSQT 151
>gi|254232709|ref|ZP_04926036.1| PE-PGRS family protein [Mycobacterium tuberculosis C]
gi|124601768|gb|EAY60778.1| PE-PGRS family protein [Mycobacterium tuberculosis C]
Length=286
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 91/152 (60%), Positives = 116/152 (77%), Gaps = 1/152 (0%)
Query 1 VSFLVVVPEFLTSAAADVENIGSTLRAANAAAAASTTALAAAGADEVSAAVAALFARFGQ 60
+SF+ PE L +AA +V NIG++L AANA AAASTT++ AAGADEVS A+A LF+ +
Sbjct 1 MSFVTAAPEMLATAAQNVANIGTSLSAANATAAASTTSVLAAGADEVSQAIARLFSDYAT 60
Query 61 EYQAVSAQASAFHQQFVQTLNSASGSYAAAEATIASQLQTAQHDLLGAVNAPTETLLGRP 120
YQ+++AQA+AFH FVQTLN+A G+Y++AEA AS Q +LL +NAP + L GRP
Sbjct 61 HYQSLNAQAAAFHHSFVQTLNAAGGAYSSAEAANASAQALEQ-NLLAVINAPAQALFGRP 119
Query 121 LIGDGAPGTATSPNGGAGGLLYGNGGNGYSAT 152
LIG+GA GTA SPNGG GG+LYGNGGNG+S T
Sbjct 120 LIGNGANGTAASPNGGDGGILYGNGGNGFSQT 151
>gi|289444130|ref|ZP_06433874.1| PE-PGRS family protein [Mycobacterium tuberculosis T46]
gi|289417049|gb|EFD14289.1| PE-PGRS family protein [Mycobacterium tuberculosis T46]
Length=543
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 91/152 (60%), Positives = 116/152 (77%), Gaps = 1/152 (0%)
Query 1 VSFLVVVPEFLTSAAADVENIGSTLRAANAAAAASTTALAAAGADEVSAAVAALFARFGQ 60
+SF+ PE L +AA +V NIG++L AANA AAASTT++ AAGADEVS A+A LF+ +
Sbjct 1 MSFVTAAPEMLATAAQNVANIGTSLSAANATAAASTTSVLAAGADEVSQAIARLFSDYAT 60
Query 61 EYQAVSAQASAFHQQFVQTLNSASGSYAAAEATIASQLQTAQHDLLGAVNAPTETLLGRP 120
YQ+++AQA+AFH FVQTLN+A G+Y++AEA AS Q +LL +NAP + L GRP
Sbjct 61 HYQSLNAQAAAFHHSFVQTLNAAGGAYSSAEAANASAQALEQ-NLLAVINAPAQALFGRP 119
Query 121 LIGDGAPGTATSPNGGAGGLLYGNGGNGYSAT 152
LIG+GA GTA SPNGG GG+LYGNGGNG+S T
Sbjct 120 LIGNGANGTAASPNGGDGGILYGNGGNGFSQT 151
>gi|340627608|ref|YP_004746060.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
gi|340005798|emb|CCC44964.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
Length=546
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 91/152 (60%), Positives = 116/152 (77%), Gaps = 1/152 (0%)
Query 1 VSFLVVVPEFLTSAAADVENIGSTLRAANAAAAASTTALAAAGADEVSAAVAALFARFGQ 60
+SF+ PE L +AA +V NIG++L AANA AAASTT++ AAGADEVS A+A LF+ +
Sbjct 1 MSFVTAAPEMLATAAQNVANIGTSLSAANATAAASTTSVLAAGADEVSQAIARLFSDYAT 60
Query 61 EYQAVSAQASAFHQQFVQTLNSASGSYAAAEATIASQLQTAQHDLLGAVNAPTETLLGRP 120
YQ+++AQA+AFH FVQTLN+A G+Y++AEA AS Q +LL +NAP + L GRP
Sbjct 61 HYQSLNAQAAAFHHSFVQTLNAAGGAYSSAEAANASAQALEQ-NLLAVINAPAQALFGRP 119
Query 121 LIGDGAPGTATSPNGGAGGLLYGNGGNGYSAT 152
LIG+GA GTA SPNGG GG+LYGNGGNG+S T
Sbjct 120 LIGNGANGTAASPNGGDGGILYGNGGNGFSQT 151
>gi|339632619|ref|YP_004724261.1| PE-PGRS family protein [Mycobacterium africanum GM041182]
gi|339331975|emb|CCC27678.1| PE-PGRS family protein [Mycobacterium africanum GM041182]
Length=542
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 91/152 (60%), Positives = 116/152 (77%), Gaps = 1/152 (0%)
Query 1 VSFLVVVPEFLTSAAADVENIGSTLRAANAAAAASTTALAAAGADEVSAAVAALFARFGQ 60
+SF+ PE L +AA +V NIG++L AANA AAASTT++ AAGADEVS A+A LF+ +
Sbjct 1 MSFVTAAPEMLATAAQNVANIGTSLSAANATAAASTTSVLAAGADEVSQAIARLFSDYAT 60
Query 61 EYQAVSAQASAFHQQFVQTLNSASGSYAAAEATIASQLQTAQHDLLGAVNAPTETLLGRP 120
YQ+++AQA+AFH FVQTLN+A G+Y++AEA AS Q +LL +NAP + L GRP
Sbjct 61 HYQSLNAQAAAFHHSFVQTLNAAGGAYSSAEAANASAQALEQ-NLLAVINAPAQALFGRP 119
Query 121 LIGDGAPGTATSPNGGAGGLLYGNGGNGYSAT 152
LIG+GA GTA SPNGG GG+LYGNGGNG+S T
Sbjct 120 LIGNGANGTAASPNGGDGGILYGNGGNGFSQT 151
>gi|31793775|ref|NP_856268.1| PE-PGRS family protein [Mycobacterium bovis AF2122/97]
gi|121638476|ref|YP_978700.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|224990970|ref|YP_002645657.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|31619369|emb|CAD94807.1| PE-PGRS FAMILY PROTEIN [Mycobacterium bovis AF2122/97]
gi|121494124|emb|CAL72602.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|224774083|dbj|BAH26889.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|341602514|emb|CCC65190.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Moreau RDJ]
Length=546
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 91/152 (60%), Positives = 116/152 (77%), Gaps = 1/152 (0%)
Query 1 VSFLVVVPEFLTSAAADVENIGSTLRAANAAAAASTTALAAAGADEVSAAVAALFARFGQ 60
+SF+ PE L +AA +V NIG++L AANA AAASTT++ AAGADEVS A+A LF+ +
Sbjct 1 MSFVTAAPEMLATAAQNVANIGTSLSAANATAAASTTSVLAAGADEVSQAIARLFSDYAT 60
Query 61 EYQAVSAQASAFHQQFVQTLNSASGSYAAAEATIASQLQTAQHDLLGAVNAPTETLLGRP 120
YQ+++AQA+AFH FVQTLN+A G+Y++AEA AS Q +LL +NAP + L GRP
Sbjct 61 HYQSLNAQAAAFHHSFVQTLNAAGGAYSSAEAANASAQALEQ-NLLAVINAPAQALFGRP 119
Query 121 LIGDGAPGTATSPNGGAGGLLYGNGGNGYSAT 152
LIG+GA GTA SPNGG GG+LYGNGGNG+S T
Sbjct 120 LIGNGANGTAASPNGGDGGILYGNGGNGFSQT 151
>gi|57117002|ref|YP_177891.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Rv]
gi|148823786|ref|YP_001288540.1| PE-PGRS family protein [Mycobacterium tuberculosis F11]
gi|2496502|sp|Q50630.1|PG44_MYCTU RecName: Full=Uncharacterized PE-PGRS family protein PE_PGRS44
gi|41353430|emb|CAE55501.1| PE-PGRS FAMILY PROTEIN [Mycobacterium tuberculosis H37Rv]
gi|148722313|gb|ABR06938.1| PE-PGRS family protein [Mycobacterium tuberculosis F11]
gi|344220418|gb|AEN01049.1| PE-PGRS family protein [Mycobacterium tuberculosis CTRI-2]
Length=543
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 91/152 (60%), Positives = 116/152 (77%), Gaps = 1/152 (0%)
Query 1 VSFLVVVPEFLTSAAADVENIGSTLRAANAAAAASTTALAAAGADEVSAAVAALFARFGQ 60
+SF+ PE L +AA +V NIG++L AANA AAASTT++ AAGADEVS A+A LF+ +
Sbjct 1 MSFVTAAPEMLATAAQNVANIGTSLSAANATAAASTTSVLAAGADEVSQAIARLFSDYAT 60
Query 61 EYQAVSAQASAFHQQFVQTLNSASGSYAAAEATIASQLQTAQHDLLGAVNAPTETLLGRP 120
YQ+++AQA+AFH FVQTLN+A G+Y++AEA AS Q +LL +NAP + L GRP
Sbjct 61 HYQSLNAQAAAFHHSFVQTLNAAGGAYSSAEAANASAQALEQ-NLLAVINAPAQALFGRP 119
Query 121 LIGDGAPGTATSPNGGAGGLLYGNGGNGYSAT 152
LIG+GA GTA SPNGG GG+LYGNGGNG+S T
Sbjct 120 LIGNGANGTAASPNGGDGGILYGNGGNGFSQT 151
>gi|297732193|ref|ZP_06961311.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN R506]
Length=399
Score = 138 bits (347), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 91/152 (60%), Positives = 116/152 (77%), Gaps = 1/152 (0%)
Query 1 VSFLVVVPEFLTSAAADVENIGSTLRAANAAAAASTTALAAAGADEVSAAVAALFARFGQ 60
+SF+ PE L +AA +V NIG++L AANA AAASTT++ AAGADEVS A+A LF+ +
Sbjct 1 MSFVTAAPEMLATAAQNVANIGTSLSAANATAAASTTSVLAAGADEVSQAIARLFSDYAT 60
Query 61 EYQAVSAQASAFHQQFVQTLNSASGSYAAAEATIASQLQTAQHDLLGAVNAPTETLLGRP 120
YQ+++AQA+AFH FVQTLN+A G+Y++AEA AS Q +LL +NAP + L GRP
Sbjct 61 HYQSLNAQAAAFHHSFVQTLNAAGGAYSSAEAANASAQALEQ-NLLAVINAPAQALFGRP 119
Query 121 LIGDGAPGTATSPNGGAGGLLYGNGGNGYSAT 152
LIG+GA GTA SPNGG GG+LYGNGGNG+S T
Sbjct 120 LIGNGANGTAASPNGGDGGILYGNGGNGFSQT 151
>gi|289754709|ref|ZP_06514087.1| PE-PGRS family protein [Mycobacterium tuberculosis EAS054]
gi|289695296|gb|EFD62725.1| PE-PGRS family protein [Mycobacterium tuberculosis EAS054]
Length=293
Score = 138 bits (347), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 91/152 (60%), Positives = 116/152 (77%), Gaps = 1/152 (0%)
Query 1 VSFLVVVPEFLTSAAADVENIGSTLRAANAAAAASTTALAAAGADEVSAAVAALFARFGQ 60
+SF+ PE L +AA +V NIG++L AANA AAASTT++ AAGADEVS A+A LF+ +
Sbjct 1 MSFVTAAPEMLATAAQNVANIGTSLSAANATAAASTTSVLAAGADEVSQAIARLFSDYAT 60
Query 61 EYQAVSAQASAFHQQFVQTLNSASGSYAAAEATIASQLQTAQHDLLGAVNAPTETLLGRP 120
YQ+++AQA+AFH FVQTLN+A G+Y++AEA AS Q +LL +NAP + L GRP
Sbjct 61 HYQSLNAQAAAFHHSFVQTLNAAGGAYSSAEAANASAQALEQ-NLLAVINAPAQALFGRP 119
Query 121 LIGDGAPGTATSPNGGAGGLLYGNGGNGYSAT 152
LIG+GA GTA SPNGG GG+LYGNGGNG+S T
Sbjct 120 LIGNGANGTAASPNGGDGGILYGNGGNGFSQT 151
>gi|340626466|ref|YP_004744918.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
gi|340004656|emb|CCC43800.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
Length=1006
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 71/122 (59%), Positives = 94/122 (78%), Gaps = 0/122 (0%)
Query 1 VSFLVVVPEFLTSAAADVENIGSTLRAANAAAAASTTALAAAGADEVSAAVAALFARFGQ 60
+S ++V PE + +AA+DV IGS AAN+ AA STT++ AAGADEVSAA+A LF +
Sbjct 1 MSLVIVTPELVAAAASDVARIGSGFGAANSTAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
Query 61 EYQAVSAQASAFHQQFVQTLNSASGSYAAAEATIASQLQTAQHDLLGAVNAPTETLLGRP 120
EYQA+S Q +AFH +FVQTL++A GSY +AEAT A+ L T +H++L A+NAPT+ LLGRP
Sbjct 61 EYQAISTQVAAFHDRFVQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
Query 121 LI 122
LI
Sbjct 121 LI 122
>gi|339294426|gb|AEJ46537.1| putative PE family protein [Mycobacterium tuberculosis CCDC5079]
Length=1330
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 70/122 (58%), Positives = 95/122 (78%), Gaps = 0/122 (0%)
Query 1 VSFLVVVPEFLTSAAADVENIGSTLRAANAAAAASTTALAAAGADEVSAAVAALFARFGQ 60
+S ++V PE + +AA+DV IGS++ AN+AAA STT++ AAGADEVSAA+A LF +
Sbjct 2 MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 61
Query 61 EYQAVSAQASAFHQQFVQTLNSASGSYAAAEATIASQLQTAQHDLLGAVNAPTETLLGRP 120
EYQA+S Q +AFH +F QTL++A GSY +AEAT A+ L T +H++L A+NAPT+ LLGRP
Sbjct 62 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 121
Query 121 LI 122
LI
Sbjct 122 LI 123
>gi|339294428|gb|AEJ46539.1| hypothetical protein CCDC5079_1349 [Mycobacterium tuberculosis
CCDC5079]
Length=742
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 70/122 (58%), Positives = 95/122 (78%), Gaps = 0/122 (0%)
Query 1 VSFLVVVPEFLTSAAADVENIGSTLRAANAAAAASTTALAAAGADEVSAAVAALFARFGQ 60
+S ++V PE + +AA+DV IGS++ AN+AAA STT++ AAGADEVSAA+A LF +
Sbjct 2 MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 61
Query 61 EYQAVSAQASAFHQQFVQTLNSASGSYAAAEATIASQLQTAQHDLLGAVNAPTETLLGRP 120
EYQA+S Q +AFH +F QTL++A GSY +AEAT A+ L T +H++L A+NAPT+ LLGRP
Sbjct 62 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 121
Query 121 LI 122
LI
Sbjct 122 LI 123
>gi|339631519|ref|YP_004723161.1| PE-PGRS family protein [Mycobacterium africanum GM041182]
gi|339330875|emb|CCC26546.1| PE-PGRS family protein [Mycobacterium africanum GM041182]
Length=805
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 70/122 (58%), Positives = 95/122 (78%), Gaps = 0/122 (0%)
Query 1 VSFLVVVPEFLTSAAADVENIGSTLRAANAAAAASTTALAAAGADEVSAAVAALFARFGQ 60
+S ++V PE + +AA+DV IGS++ AN+AAA STT++ AAGADEVSAA+A LF +
Sbjct 1 MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
Query 61 EYQAVSAQASAFHQQFVQTLNSASGSYAAAEATIASQLQTAQHDLLGAVNAPTETLLGRP 120
EYQA+S Q +AFH +F QTL++A GSY +AEAT A+ L T +H++L A+NAPT+ LLGRP
Sbjct 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
Query 121 LI 122
LI
Sbjct 121 LI 122
>gi|289442899|ref|ZP_06432643.1| PE domain-containing protein [Mycobacterium tuberculosis T46]
gi|289415818|gb|EFD13058.1| PE domain-containing protein [Mycobacterium tuberculosis T46]
Length=527
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 70/122 (58%), Positives = 95/122 (78%), Gaps = 0/122 (0%)
Query 1 VSFLVVVPEFLTSAAADVENIGSTLRAANAAAAASTTALAAAGADEVSAAVAALFARFGQ 60
+S ++V PE + +AA+DV IGS++ AN+AAA STT++ AAGADEVSAA+A LF +
Sbjct 2 MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 61
Query 61 EYQAVSAQASAFHQQFVQTLNSASGSYAAAEATIASQLQTAQHDLLGAVNAPTETLLGRP 120
EYQA+S Q +AFH +F QTL++A GSY +AEAT A+ L T +H++L A+NAPT+ LLGRP
Sbjct 62 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 121
Query 121 LI 122
LI
Sbjct 122 LI 123
>gi|15840912|ref|NP_335949.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551]
gi|13881115|gb|AAK45763.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551]
Length=738
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 70/122 (58%), Positives = 95/122 (78%), Gaps = 0/122 (0%)
Query 1 VSFLVVVPEFLTSAAADVENIGSTLRAANAAAAASTTALAAAGADEVSAAVAALFARFGQ 60
+S ++V PE + +AA+DV IGS++ AN+AAA STT++ AAGADEVSAA+A LF +
Sbjct 2 MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 61
Query 61 EYQAVSAQASAFHQQFVQTLNSASGSYAAAEATIASQLQTAQHDLLGAVNAPTETLLGRP 120
EYQA+S Q +AFH +F QTL++A GSY +AEAT A+ L T +H++L A+NAPT+ LLGRP
Sbjct 62 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 121
Query 121 LI 122
LI
Sbjct 122 LI 123
>gi|339298066|gb|AEJ50176.1| hypothetical protein CCDC5180_1339 [Mycobacterium tuberculosis
CCDC5180]
Length=742
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 70/122 (58%), Positives = 95/122 (78%), Gaps = 0/122 (0%)
Query 1 VSFLVVVPEFLTSAAADVENIGSTLRAANAAAAASTTALAAAGADEVSAAVAALFARFGQ 60
+S ++V PE + +AA+DV IGS++ AN+AAA STT++ AAGADEVSAA+A LF +
Sbjct 2 MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 61
Query 61 EYQAVSAQASAFHQQFVQTLNSASGSYAAAEATIASQLQTAQHDLLGAVNAPTETLLGRP 120
EYQA+S Q +AFH +F QTL++A GSY +AEAT A+ L T +H++L A+NAPT+ LLGRP
Sbjct 62 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 121
Query 121 LI 122
LI
Sbjct 122 LI 123
>gi|148822671|ref|YP_001287425.1| PE-PGRS family protein [Mycobacterium tuberculosis F11]
gi|148721198|gb|ABR05823.1| PE-PGRS family protein [Mycobacterium tuberculosis F11]
Length=737
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 70/122 (58%), Positives = 95/122 (78%), Gaps = 0/122 (0%)
Query 1 VSFLVVVPEFLTSAAADVENIGSTLRAANAAAAASTTALAAAGADEVSAAVAALFARFGQ 60
+S ++V PE + +AA+DV IGS++ AN+AAA STT++ AAGADEVSAA+A LF +
Sbjct 1 MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
Query 61 EYQAVSAQASAFHQQFVQTLNSASGSYAAAEATIASQLQTAQHDLLGAVNAPTETLLGRP 120
EYQA+S Q +AFH +F QTL++A GSY +AEAT A+ L T +H++L A+NAPT+ LLGRP
Sbjct 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
Query 121 LI 122
LI
Sbjct 121 LI 122
Lambda K H
0.313 0.137 0.408
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 1243781828814
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40