BLASTP 2.2.25+


Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           15,229,318 sequences; 5,219,829,388 total letters



Query= Rv1983

Length=558
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|57116933|ref|YP_177854.1|  PE-PGRS family protein [Mycobacteri...  1048    0.0   
gi|289754085|ref|ZP_06513463.1|  PE-PGRS family protein [Mycobact...  1046    0.0   
gi|148823197|ref|YP_001287951.1|  PE-PGRS family protein [Mycobac...  1046    0.0   
gi|15841460|ref|NP_336497.1|  PE_PGRS family protein [Mycobacteri...  1046    0.0   
gi|31793162|ref|NP_855655.1|  PE-PGRS family protein [Mycobacteri...  1046    0.0   
gi|340626996|ref|YP_004745448.1|  PE-PGRS family protein [Mycobac...  1043    0.0   
gi|308375740|ref|ZP_07668099.1|  hypothetical protein TMGG_00529 ...   543    3e-152
gi|183982936|ref|YP_001851227.1|  PE-PGRS family protein [Mycobac...   390    4e-106
gi|308375739|ref|ZP_07668098.1|  putative PE family protein [Myco...   219    7e-55 
gi|289750562|ref|ZP_06509940.1|  PE-PGRS family protein [Mycobact...   219    1e-54 
gi|118619532|ref|YP_907864.1|  PE-PGRS family protein [Mycobacter...   182    1e-43 
gi|253799995|ref|YP_003032996.1|  PE-PGRS family protein [Mycobac...   178    2e-42 
gi|339293981|gb|AEJ46092.1|  PE-PGRS family protein [Mycobacteriu...   178    3e-42 
gi|31792166|ref|NP_854659.1|  PE-PGRS family protein [Mycobacteri...   178    3e-42 
gi|148660757|ref|YP_001282280.1|  PE-PGRS family protein [Mycobac...   178    3e-42 
gi|340625989|ref|YP_004744441.1|  PE-PGRS family protein [Mycobac...   177    4e-42 
gi|289446553|ref|ZP_06436297.1|  PE-PGRS family protein [Mycobact...   177    6e-42 
gi|224989375|ref|YP_002644062.1|  PE-PGRS family protein [Mycobac...   176    1e-41 
gi|183983189|ref|YP_001851480.1|  PE-PGRS family protein [Mycobac...   172    1e-40 
gi|289555241|ref|ZP_06444451.1|  LOW QUALITY PROTEIN: predicted p...   170    7e-40 
gi|118618801|ref|YP_907133.1|  PE-PGRS family protein [Mycobacter...   166    9e-39 
gi|183985289|ref|YP_001853580.1|  PE-PGRS family protein [Mycobac...   166    1e-38 
gi|240172373|ref|ZP_04751032.1|  PE-PGRS family protein [Mycobact...   156    8e-36 
gi|183982972|ref|YP_001851263.1|  PE-PGRS family protein [Mycobac...   152    1e-34 
gi|183982127|ref|YP_001850418.1|  PE-PGRS family protein [Mycobac...   152    2e-34 
gi|289448241|ref|ZP_06437985.1|  PE-PGRS family protein [Mycobact...   149    1e-33 
gi|183982126|ref|YP_001850417.1|  PE-PGRS family protein [Mycobac...   149    1e-33 
gi|118617342|ref|YP_905674.1|  PE-PGRS family protein [Mycobacter...   146    1e-32 
gi|183985067|ref|YP_001853358.1|  PE-PGRS family protein [Mycobac...   139    9e-31 
gi|289575300|ref|ZP_06455527.1|  PE-PGRS family protein [Mycobact...   139    1e-30 
gi|148662430|ref|YP_001283953.1|  PE-PGRS family protein [Mycobac...   139    2e-30 
gi|289570762|ref|ZP_06450989.1|  PE-PGRS family protein [Mycobact...   139    2e-30 
gi|297635201|ref|ZP_06952981.1|  PE-PGRS family protein [Mycobact...   139    2e-30 
gi|294994300|ref|ZP_06799991.1|  PE-PGRS family protein [Mycobact...   139    2e-30 
gi|254232709|ref|ZP_04926036.1|  PE-PGRS family protein [Mycobact...   139    2e-30 
gi|289444130|ref|ZP_06433874.1|  PE-PGRS family protein [Mycobact...   138    2e-30 
gi|340627608|ref|YP_004746060.1|  PE-PGRS family protein [Mycobac...   138    2e-30 
gi|339632619|ref|YP_004724261.1|  PE-PGRS family protein [Mycobac...   138    2e-30 
gi|31793775|ref|NP_856268.1|  PE-PGRS family protein [Mycobacteri...   138    2e-30 
gi|57117002|ref|YP_177891.1|  PE-PGRS family protein [Mycobacteri...   138    2e-30 
gi|297732193|ref|ZP_06961311.1|  PE-PGRS family protein [Mycobact...   138    3e-30 
gi|289754709|ref|ZP_06514087.1|  PE-PGRS family protein [Mycobact...   138    3e-30 
gi|340626466|ref|YP_004744918.1|  PE-PGRS family protein [Mycobac...   136    1e-29 
gi|339294426|gb|AEJ46537.1|  putative PE family protein [Mycobact...   135    1e-29 
gi|339294428|gb|AEJ46539.1|  hypothetical protein CCDC5079_1349 [...   135    2e-29 
gi|339631519|ref|YP_004723161.1|  PE-PGRS family protein [Mycobac...   135    2e-29 
gi|289442899|ref|ZP_06432643.1|  PE domain-containing protein [My...   135    2e-29 
gi|15840912|ref|NP_335949.1|  PE_PGRS family protein [Mycobacteri...   135    2e-29 
gi|339298066|gb|AEJ50176.1|  hypothetical protein CCDC5180_1339 [...   135    2e-29 
gi|148822671|ref|YP_001287425.1|  PE-PGRS family protein [Mycobac...   135    2e-29 


>gi|57116933|ref|YP_177854.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Rv]
 gi|148661793|ref|YP_001283316.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra]
 gi|167970493|ref|ZP_02552770.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra]
 56 more sequence titles
 Length=558

 Score = 1048 bits (2710),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 557/558 (99%), Positives = 558/558 (100%), Gaps = 0/558 (0%)

Query  1    VSFLVVVPEFLTSAAADVENIGSTLRAANAAAAASTTALAAAGADEVSAAVAALFARFGQ  60
            +SFLVVVPEFLTSAAADVENIGSTLRAANAAAAASTTALAAAGADEVSAAVAALFARFGQ
Sbjct  1    MSFLVVVPEFLTSAAADVENIGSTLRAANAAAAASTTALAAAGADEVSAAVAALFARFGQ  60

Query  61   EYQAVSAQASAFHQQFVQTLNSASGSYAAAEATIASQLQTAQHDLLGAVNAPTETLLGRP  120
            EYQAVSAQASAFHQQFVQTLNSASGSYAAAEATIASQLQTAQHDLLGAVNAPTETLLGRP
Sbjct  61   EYQAVSAQASAFHQQFVQTLNSASGSYAAAEATIASQLQTAQHDLLGAVNAPTETLLGRP  120

Query  121  LIGDGAPGTATSPNGGAGGLLYGNGGNGYSATASGVGGGAGGSAGLIGNGGAGGAGGPNA  180
            LIGDGAPGTATSPNGGAGGLLYGNGGNGYSATASGVGGGAGGSAGLIGNGGAGGAGGPNA
Sbjct  121  LIGDGAPGTATSPNGGAGGLLYGNGGNGYSATASGVGGGAGGSAGLIGNGGAGGAGGPNA  180

Query  181  PGGAGGNGGWLLGNGGIGGPGGASSIPGMSGGAGGTGGAAGLLGWGANGGAGGLGDGVGV  240
            PGGAGGNGGWLLGNGGIGGPGGASSIPGMSGGAGGTGGAAGLLGWGANGGAGGLGDGVGV
Sbjct  181  PGGAGGNGGWLLGNGGIGGPGGASSIPGMSGGAGGTGGAAGLLGWGANGGAGGLGDGVGV  240

Query  241  DRGTGGAGGRGGLLYGGYGVSGPGGDGRTVPLEIIHVTEPTVHANVNGGPTSTILVDTGS  300
            DRGTGGAGGRGGLLYGGYGVSGPGGDGRTVPLEIIHVTEPTVHANVNGGPTSTILVDTGS
Sbjct  241  DRGTGGAGGRGGLLYGGYGVSGPGGDGRTVPLEIIHVTEPTVHANVNGGPTSTILVDTGS  300

Query  301  AGLVVSPEDVGGILGVLHMGLPTGLSISGYSGGLYYIFATYTTTVDFGNGIVTAPTAVNV  360
            AGLVVSPEDVGGILGVLHMGLPTGLSISGYSGGLYYIFATYTTTVDFGNGIVTAPTAVNV
Sbjct  301  AGLVVSPEDVGGILGVLHMGLPTGLSISGYSGGLYYIFATYTTTVDFGNGIVTAPTAVNV  360

Query  361  VLLSIPTSPFAISTYFSALLADPTTTPFEAYFGAVGVDGVLGVGPNAVGPGPSIPTMALP  420
            VLLSIPTSPFAISTYFSALLADPTTTPFEAYFGAVGVDGVLGVGPNAVGPGPSIPTMALP
Sbjct  361  VLLSIPTSPFAISTYFSALLADPTTTPFEAYFGAVGVDGVLGVGPNAVGPGPSIPTMALP  420

Query  421  GDLNQGVLIDAPAGELVFGPNPLPAPNVEVVGSPITTLYVKIDGGTPIPVPSIIDSGGVT  480
            GDLNQGVLIDAPAGELVFGPNPLPAPNVEVVGSPITTLYVKIDGGTPIPVPSIIDSGGVT
Sbjct  421  GDLNQGVLIDAPAGELVFGPNPLPAPNVEVVGSPITTLYVKIDGGTPIPVPSIIDSGGVT  480

Query  481  GTIPSYVIGSGTLPANTNIEVYTSPGGDRLYAFNTNDYRPTVISSGLMNTGFLPFRFQPV  540
            GTIPSYVIGSGTLPANTNIEVYTSPGGDRLYAFNTNDYRPTVISSGLMNTGFLPFRFQPV
Sbjct  481  GTIPSYVIGSGTLPANTNIEVYTSPGGDRLYAFNTNDYRPTVISSGLMNTGFLPFRFQPV  540

Query  541  YIDYSPSGIGTTVFDHPA  558
            YIDYSPSGIGTTVFDHPA
Sbjct  541  YIDYSPSGIGTTVFDHPA  558


>gi|289754085|ref|ZP_06513463.1| PE-PGRS family protein [Mycobacterium tuberculosis EAS054]
 gi|289694672|gb|EFD62101.1| PE-PGRS family protein [Mycobacterium tuberculosis EAS054]
Length=558

 Score = 1046 bits (2706),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 556/558 (99%), Positives = 558/558 (100%), Gaps = 0/558 (0%)

Query  1    VSFLVVVPEFLTSAAADVENIGSTLRAANAAAAASTTALAAAGADEVSAAVAALFARFGQ  60
            +SFLVVVPEFLTSAAADVENIGSTLRAANAAAAASTTALAAAGADEVSAAVAALFARFGQ
Sbjct  1    MSFLVVVPEFLTSAAADVENIGSTLRAANAAAAASTTALAAAGADEVSAAVAALFARFGQ  60

Query  61   EYQAVSAQASAFHQQFVQTLNSASGSYAAAEATIASQLQTAQHDLLGAVNAPTETLLGRP  120
            EYQAVSAQASAFHQQFVQTLNSASGSYAAAEATIASQLQTAQHDLLGAVNAPTETLLGRP
Sbjct  61   EYQAVSAQASAFHQQFVQTLNSASGSYAAAEATIASQLQTAQHDLLGAVNAPTETLLGRP  120

Query  121  LIGDGAPGTATSPNGGAGGLLYGNGGNGYSATASGVGGGAGGSAGLIGNGGAGGAGGPNA  180
            LIGDGAPGTATSPNGGAGGLLYGNGGNGYSATASGVGGGAGGSAGLIGNGGAGGAGGPNA
Sbjct  121  LIGDGAPGTATSPNGGAGGLLYGNGGNGYSATASGVGGGAGGSAGLIGNGGAGGAGGPNA  180

Query  181  PGGAGGNGGWLLGNGGIGGPGGASSIPGMSGGAGGTGGAAGLLGWGANGGAGGLGDGVGV  240
            PGGAGGNGGWLLGNGGIGGPGGASSIPGMSGGAGGTGGAAGLLGWGANGGAGGLGDGVGV
Sbjct  181  PGGAGGNGGWLLGNGGIGGPGGASSIPGMSGGAGGTGGAAGLLGWGANGGAGGLGDGVGV  240

Query  241  DRGTGGAGGRGGLLYGGYGVSGPGGDGRTVPLEIIHVTEPTVHANVNGGPTSTILVDTGS  300
            DRGTGGAGGRGGLLYGGYGVSGPGGDGRTVPLEIIHVTEPTVHANVNGGPTSTILVDTGS
Sbjct  241  DRGTGGAGGRGGLLYGGYGVSGPGGDGRTVPLEIIHVTEPTVHANVNGGPTSTILVDTGS  300

Query  301  AGLVVSPEDVGGILGVLHMGLPTGLSISGYSGGLYYIFATYTTTVDFGNGIVTAPTAVNV  360
            AGLVVSPEDVGGILGVLHMGLPTGLSISGYSGGLYYIFATYTTTVDFGNGIVTAPTAVNV
Sbjct  301  AGLVVSPEDVGGILGVLHMGLPTGLSISGYSGGLYYIFATYTTTVDFGNGIVTAPTAVNV  360

Query  361  VLLSIPTSPFAISTYFSALLADPTTTPFEAYFGAVGVDGVLGVGPNAVGPGPSIPTMALP  420
            VLLSIPTSPFAISTYFSALLADPTTTPFEAYFGAVGVDGVLGVGPNAVGPGPSIPTMALP
Sbjct  361  VLLSIPTSPFAISTYFSALLADPTTTPFEAYFGAVGVDGVLGVGPNAVGPGPSIPTMALP  420

Query  421  GDLNQGVLIDAPAGELVFGPNPLPAPNVEVVGSPITTLYVKIDGGTPIPVPSIIDSGGVT  480
            GDLNQGVLIDAPAGELVFGPNPLPAPNVEVVGSPITTLYVKIDGGTPIPVPSIIDSGGVT
Sbjct  421  GDLNQGVLIDAPAGELVFGPNPLPAPNVEVVGSPITTLYVKIDGGTPIPVPSIIDSGGVT  480

Query  481  GTIPSYVIGSGTLPANTNIEVYTSPGGDRLYAFNTNDYRPTVISSGLMNTGFLPFRFQPV  540
            GTIPSYVIGSGTLPANTNIEVYTSPGGDRLYAFNT+DYRPTVISSGLMNTGFLPFRFQPV
Sbjct  481  GTIPSYVIGSGTLPANTNIEVYTSPGGDRLYAFNTSDYRPTVISSGLMNTGFLPFRFQPV  540

Query  541  YIDYSPSGIGTTVFDHPA  558
            YIDYSPSGIGTTVFDHPA
Sbjct  541  YIDYSPSGIGTTVFDHPA  558


>gi|148823197|ref|YP_001287951.1| PE-PGRS family protein [Mycobacterium tuberculosis F11]
 gi|148721724|gb|ABR06349.1| PE-PGRS family protein [Mycobacterium tuberculosis F11]
Length=558

 Score = 1046 bits (2706),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 556/558 (99%), Positives = 557/558 (99%), Gaps = 0/558 (0%)

Query  1    VSFLVVVPEFLTSAAADVENIGSTLRAANAAAAASTTALAAAGADEVSAAVAALFARFGQ  60
            +SFLVVVPEFLTSAAADVENIGSTLRAANAAAAASTTALAAAGADEVSAAVAALFARFGQ
Sbjct  1    MSFLVVVPEFLTSAAADVENIGSTLRAANAAAAASTTALAAAGADEVSAAVAALFARFGQ  60

Query  61   EYQAVSAQASAFHQQFVQTLNSASGSYAAAEATIASQLQTAQHDLLGAVNAPTETLLGRP  120
            EYQAVSAQASAFHQQFVQTLNSASGSYAAAEATIASQLQTAQHDLLGAVNAPTETLLGRP
Sbjct  61   EYQAVSAQASAFHQQFVQTLNSASGSYAAAEATIASQLQTAQHDLLGAVNAPTETLLGRP  120

Query  121  LIGDGAPGTATSPNGGAGGLLYGNGGNGYSATASGVGGGAGGSAGLIGNGGAGGAGGPNA  180
            LIGDGAPGTATSPNGGAGGLLYGNGGNGYSATASGVGGGAGGSAGLIGNGGAGGAGGPNA
Sbjct  121  LIGDGAPGTATSPNGGAGGLLYGNGGNGYSATASGVGGGAGGSAGLIGNGGAGGAGGPNA  180

Query  181  PGGAGGNGGWLLGNGGIGGPGGASSIPGMSGGAGGTGGAAGLLGWGANGGAGGLGDGVGV  240
            PGGAGGNGGWLLGNGGIGGPGGASSIPGMSGGAGGTGGAAGLLGWGANGGAGGLGDGVGV
Sbjct  181  PGGAGGNGGWLLGNGGIGGPGGASSIPGMSGGAGGTGGAAGLLGWGANGGAGGLGDGVGV  240

Query  241  DRGTGGAGGRGGLLYGGYGVSGPGGDGRTVPLEIIHVTEPTVHANVNGGPTSTILVDTGS  300
            DRGTGGAGGRGGLLYGGYGVSGPGGDGRTVPLEIIHVTEPTVHANVNGGPTSTILVDTGS
Sbjct  241  DRGTGGAGGRGGLLYGGYGVSGPGGDGRTVPLEIIHVTEPTVHANVNGGPTSTILVDTGS  300

Query  301  AGLVVSPEDVGGILGVLHMGLPTGLSISGYSGGLYYIFATYTTTVDFGNGIVTAPTAVNV  360
            AGLVVSPEDVGGILGVLHMGLPTGLSISGYSGGLYYIFATYTTTVDFGNGIVTAPTAVNV
Sbjct  301  AGLVVSPEDVGGILGVLHMGLPTGLSISGYSGGLYYIFATYTTTVDFGNGIVTAPTAVNV  360

Query  361  VLLSIPTSPFAISTYFSALLADPTTTPFEAYFGAVGVDGVLGVGPNAVGPGPSIPTMALP  420
            VLLSIPTSPFAISTYFSALLADPTTTPFEAYFGAVGVDGVLGVGPNAVGPGPSIPTMALP
Sbjct  361  VLLSIPTSPFAISTYFSALLADPTTTPFEAYFGAVGVDGVLGVGPNAVGPGPSIPTMALP  420

Query  421  GDLNQGVLIDAPAGELVFGPNPLPAPNVEVVGSPITTLYVKIDGGTPIPVPSIIDSGGVT  480
            GDLNQGVLIDAPAGELVFGPNPLPAPNVEVVGSPITTLYVKIDGGTPIPV SIIDSGGVT
Sbjct  421  GDLNQGVLIDAPAGELVFGPNPLPAPNVEVVGSPITTLYVKIDGGTPIPVSSIIDSGGVT  480

Query  481  GTIPSYVIGSGTLPANTNIEVYTSPGGDRLYAFNTNDYRPTVISSGLMNTGFLPFRFQPV  540
            GTIPSYVIGSGTLPANTNIEVYTSPGGDRLYAFNTNDYRPTVISSGLMNTGFLPFRFQPV
Sbjct  481  GTIPSYVIGSGTLPANTNIEVYTSPGGDRLYAFNTNDYRPTVISSGLMNTGFLPFRFQPV  540

Query  541  YIDYSPSGIGTTVFDHPA  558
            YIDYSPSGIGTTVFDHPA
Sbjct  541  YIDYSPSGIGTTVFDHPA  558


>gi|15841460|ref|NP_336497.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551]
 gi|13881700|gb|AAK46311.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551]
Length=558

 Score = 1046 bits (2705),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 556/558 (99%), Positives = 557/558 (99%), Gaps = 0/558 (0%)

Query  1    VSFLVVVPEFLTSAAADVENIGSTLRAANAAAAASTTALAAAGADEVSAAVAALFARFGQ  60
            +SFLVVVPEFLTSAAADVENIGSTLRAANAAAAASTTALAAAGADEVSAAVAALFARFGQ
Sbjct  1    MSFLVVVPEFLTSAAADVENIGSTLRAANAAAAASTTALAAAGADEVSAAVAALFARFGQ  60

Query  61   EYQAVSAQASAFHQQFVQTLNSASGSYAAAEATIASQLQTAQHDLLGAVNAPTETLLGRP  120
            EYQAVSAQASAFHQQFVQTLNSASGSYAAAEATIASQLQTAQHDLLGAVNAPTETLLGRP
Sbjct  61   EYQAVSAQASAFHQQFVQTLNSASGSYAAAEATIASQLQTAQHDLLGAVNAPTETLLGRP  120

Query  121  LIGDGAPGTATSPNGGAGGLLYGNGGNGYSATASGVGGGAGGSAGLIGNGGAGGAGGPNA  180
            LIGDGAPGTATSPNGGAGGLLYGNGGNGYSATASGV GGAGGSAGLIGNGGAGGAGGPNA
Sbjct  121  LIGDGAPGTATSPNGGAGGLLYGNGGNGYSATASGVXGGAGGSAGLIGNGGAGGAGGPNA  180

Query  181  PGGAGGNGGWLLGNGGIGGPGGASSIPGMSGGAGGTGGAAGLLGWGANGGAGGLGDGVGV  240
            PGGAGGNGGWLLGNGGIGGPGGASSIPGMSGGAGGTGGAAGLLGWGANGGAGGLGDGVGV
Sbjct  181  PGGAGGNGGWLLGNGGIGGPGGASSIPGMSGGAGGTGGAAGLLGWGANGGAGGLGDGVGV  240

Query  241  DRGTGGAGGRGGLLYGGYGVSGPGGDGRTVPLEIIHVTEPTVHANVNGGPTSTILVDTGS  300
            DRGTGGAGGRGGLLYGGYGVSGPGGDGRTVPLEIIHVTEPTVHANVNGGPTSTILVDTGS
Sbjct  241  DRGTGGAGGRGGLLYGGYGVSGPGGDGRTVPLEIIHVTEPTVHANVNGGPTSTILVDTGS  300

Query  301  AGLVVSPEDVGGILGVLHMGLPTGLSISGYSGGLYYIFATYTTTVDFGNGIVTAPTAVNV  360
            AGLVVSPEDVGGILGVLHMGLPTGLSISGYSGGLYYIFATYTTTVDFGNGIVTAPTAVNV
Sbjct  301  AGLVVSPEDVGGILGVLHMGLPTGLSISGYSGGLYYIFATYTTTVDFGNGIVTAPTAVNV  360

Query  361  VLLSIPTSPFAISTYFSALLADPTTTPFEAYFGAVGVDGVLGVGPNAVGPGPSIPTMALP  420
            VLLSIPTSPFAISTYFSALLADPTTTPFEAYFGAVGVDGVLGVGPNAVGPGPSIPTMALP
Sbjct  361  VLLSIPTSPFAISTYFSALLADPTTTPFEAYFGAVGVDGVLGVGPNAVGPGPSIPTMALP  420

Query  421  GDLNQGVLIDAPAGELVFGPNPLPAPNVEVVGSPITTLYVKIDGGTPIPVPSIIDSGGVT  480
            GDLNQGVLIDAPAGELVFGPNPLPAPNVEVVGSPITTLYVKIDGGTPIPVPSIIDSGGVT
Sbjct  421  GDLNQGVLIDAPAGELVFGPNPLPAPNVEVVGSPITTLYVKIDGGTPIPVPSIIDSGGVT  480

Query  481  GTIPSYVIGSGTLPANTNIEVYTSPGGDRLYAFNTNDYRPTVISSGLMNTGFLPFRFQPV  540
            GTIPSYVIGSGTLPANTNIEVYTSPGGDRLYAFNTNDYRPTVISSGLMNTGFLPFRFQPV
Sbjct  481  GTIPSYVIGSGTLPANTNIEVYTSPGGDRLYAFNTNDYRPTVISSGLMNTGFLPFRFQPV  540

Query  541  YIDYSPSGIGTTVFDHPA  558
            YIDYSPSGIGTTVFDHPA
Sbjct  541  YIDYSPSGIGTTVFDHPA  558


>gi|31793162|ref|NP_855655.1| PE-PGRS family protein [Mycobacterium bovis AF2122/97]
 gi|224990360|ref|YP_002645047.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172]
 gi|31618754|emb|CAD96858.1| PE-PGRS FAMILY PROTEIN [Mycobacterium bovis AF2122/97]
 gi|224773473|dbj|BAH26279.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172]
 gi|341601903|emb|CCC64577.1| PE-PGRS FAMILY PROTEIN [Mycobacterium bovis BCG str. Moreau RDJ]
Length=558

 Score = 1046 bits (2705),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 556/558 (99%), Positives = 557/558 (99%), Gaps = 0/558 (0%)

Query  1    VSFLVVVPEFLTSAAADVENIGSTLRAANAAAAASTTALAAAGADEVSAAVAALFARFGQ  60
            +SFLVVVPEFLTSAAADVENIGSTLRAANAAAAASTTALAAAGADEVSAAVAALFARFGQ
Sbjct  1    MSFLVVVPEFLTSAAADVENIGSTLRAANAAAAASTTALAAAGADEVSAAVAALFARFGQ  60

Query  61   EYQAVSAQASAFHQQFVQTLNSASGSYAAAEATIASQLQTAQHDLLGAVNAPTETLLGRP  120
            EYQAVSAQASAFHQQFVQTLNSASGSYAAAEATIASQLQTAQHDLLGAVNAPTETLLGRP
Sbjct  61   EYQAVSAQASAFHQQFVQTLNSASGSYAAAEATIASQLQTAQHDLLGAVNAPTETLLGRP  120

Query  121  LIGDGAPGTATSPNGGAGGLLYGNGGNGYSATASGVGGGAGGSAGLIGNGGAGGAGGPNA  180
            LIGDGAPGTATSPNGGAGGLLYGNGGNGYSATASGVGGGAGGSAGLIGNGGAGGAGGPNA
Sbjct  121  LIGDGAPGTATSPNGGAGGLLYGNGGNGYSATASGVGGGAGGSAGLIGNGGAGGAGGPNA  180

Query  181  PGGAGGNGGWLLGNGGIGGPGGASSIPGMSGGAGGTGGAAGLLGWGANGGAGGLGDGVGV  240
            PGGAGGNGGWLLGNGGIGGPGGASSIPGMSGGAGGTGGA GLLGWGANGGAGGLGDGVGV
Sbjct  181  PGGAGGNGGWLLGNGGIGGPGGASSIPGMSGGAGGTGGATGLLGWGANGGAGGLGDGVGV  240

Query  241  DRGTGGAGGRGGLLYGGYGVSGPGGDGRTVPLEIIHVTEPTVHANVNGGPTSTILVDTGS  300
            DRGTGGAGGRGGLLYGGYGVSGPGGDGRTVPLEIIHVTEPTVHANVNGGPTSTILVDTGS
Sbjct  241  DRGTGGAGGRGGLLYGGYGVSGPGGDGRTVPLEIIHVTEPTVHANVNGGPTSTILVDTGS  300

Query  301  AGLVVSPEDVGGILGVLHMGLPTGLSISGYSGGLYYIFATYTTTVDFGNGIVTAPTAVNV  360
            AGLVVSPEDVGGILGVLHMGLPTGLSISGYSGGLYYIFATYTTTVDFGNGIVTAPTAVNV
Sbjct  301  AGLVVSPEDVGGILGVLHMGLPTGLSISGYSGGLYYIFATYTTTVDFGNGIVTAPTAVNV  360

Query  361  VLLSIPTSPFAISTYFSALLADPTTTPFEAYFGAVGVDGVLGVGPNAVGPGPSIPTMALP  420
            VLLSIPTSPFAISTYFSALLADPTTTPFEAYFGAVGVDGVLGVGPNAVGPGPSIPTMALP
Sbjct  361  VLLSIPTSPFAISTYFSALLADPTTTPFEAYFGAVGVDGVLGVGPNAVGPGPSIPTMALP  420

Query  421  GDLNQGVLIDAPAGELVFGPNPLPAPNVEVVGSPITTLYVKIDGGTPIPVPSIIDSGGVT  480
            GDLNQGVLIDAPAGELVFGPNPLPAPNVEVVGSPITTLYVKIDGGTPIPVPSIIDSGGVT
Sbjct  421  GDLNQGVLIDAPAGELVFGPNPLPAPNVEVVGSPITTLYVKIDGGTPIPVPSIIDSGGVT  480

Query  481  GTIPSYVIGSGTLPANTNIEVYTSPGGDRLYAFNTNDYRPTVISSGLMNTGFLPFRFQPV  540
            GTIPSYVIGSGTLPANTNIEVYTSPGGDRLYAFNTNDYRPTVISSGLMNTGFLPFRFQPV
Sbjct  481  GTIPSYVIGSGTLPANTNIEVYTSPGGDRLYAFNTNDYRPTVISSGLMNTGFLPFRFQPV  540

Query  541  YIDYSPSGIGTTVFDHPA  558
            YIDYSPSGIGTTVFDHPA
Sbjct  541  YIDYSPSGIGTTVFDHPA  558


>gi|340626996|ref|YP_004745448.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
 gi|340005186|emb|CCC44335.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
Length=558

 Score = 1043 bits (2696),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 555/558 (99%), Positives = 556/558 (99%), Gaps = 0/558 (0%)

Query  1    VSFLVVVPEFLTSAAADVENIGSTLRAANAAAAASTTALAAAGADEVSAAVAALFARFGQ  60
            +SFLVVVPEFLTSAAADVENIGSTLRAANAAAAASTTALAAAGADEVSAAVAALFARFGQ
Sbjct  1    MSFLVVVPEFLTSAAADVENIGSTLRAANAAAAASTTALAAAGADEVSAAVAALFARFGQ  60

Query  61   EYQAVSAQASAFHQQFVQTLNSASGSYAAAEATIASQLQTAQHDLLGAVNAPTETLLGRP  120
            EYQAVSAQASAFHQQFVQTLNSASGSYAAAEATIASQLQTAQHDLLGAVNAPTETLLGRP
Sbjct  61   EYQAVSAQASAFHQQFVQTLNSASGSYAAAEATIASQLQTAQHDLLGAVNAPTETLLGRP  120

Query  121  LIGDGAPGTATSPNGGAGGLLYGNGGNGYSATASGVGGGAGGSAGLIGNGGAGGAGGPNA  180
            LIGDGAPGTATSPNGGAGGLLYGNGGNGYSATASGVGGGAGGSAGLIGNGGAGGAGGPNA
Sbjct  121  LIGDGAPGTATSPNGGAGGLLYGNGGNGYSATASGVGGGAGGSAGLIGNGGAGGAGGPNA  180

Query  181  PGGAGGNGGWLLGNGGIGGPGGASSIPGMSGGAGGTGGAAGLLGWGANGGAGGLGDGVGV  240
            PGGAGGNGGWLLGNGGIGGPGGASSIPGMSGGAGGTGGAAGLLGWGANGGAGGLGDGVGV
Sbjct  181  PGGAGGNGGWLLGNGGIGGPGGASSIPGMSGGAGGTGGAAGLLGWGANGGAGGLGDGVGV  240

Query  241  DRGTGGAGGRGGLLYGGYGVSGPGGDGRTVPLEIIHVTEPTVHANVNGGPTSTILVDTGS  300
            DRGTGGAGGRGGLLYGGYGVSGPGGDGRTVPLEIIHVTEPTVHANVNGGPTSTILVDTGS
Sbjct  241  DRGTGGAGGRGGLLYGGYGVSGPGGDGRTVPLEIIHVTEPTVHANVNGGPTSTILVDTGS  300

Query  301  AGLVVSPEDVGGILGVLHMGLPTGLSISGYSGGLYYIFATYTTTVDFGNGIVTAPTAVNV  360
            AGLVVSPEDVGGILGVLHMGLPTGLSISGYSGGLYYIFATYTTTVDFGNGIVTAPTAVNV
Sbjct  301  AGLVVSPEDVGGILGVLHMGLPTGLSISGYSGGLYYIFATYTTTVDFGNGIVTAPTAVNV  360

Query  361  VLLSIPTSPFAISTYFSALLADPTTTPFEAYFGAVGVDGVLGVGPNAVGPGPSIPTMALP  420
            VLLSIPTSPFAISTYFSALLADPTTTPFEAYFGAVGVDGVLGVGPNAVGPGPSIPTMALP
Sbjct  361  VLLSIPTSPFAISTYFSALLADPTTTPFEAYFGAVGVDGVLGVGPNAVGPGPSIPTMALP  420

Query  421  GDLNQGVLIDAPAGELVFGPNPLPAPNVEVVGSPITTLYVKIDGGTPIPVPSIIDSGGVT  480
            GDLNQGVLIDAPAGELVFGPNPLPAPNVEVVGSPITTLYV IDGGTPIPVPSIIDSGGVT
Sbjct  421  GDLNQGVLIDAPAGELVFGPNPLPAPNVEVVGSPITTLYVSIDGGTPIPVPSIIDSGGVT  480

Query  481  GTIPSYVIGSGTLPANTNIEVYTSPGGDRLYAFNTNDYRPTVISSGLMNTGFLPFRFQPV  540
            GTIPSYVIGSGTLPANTNIEVYTSPGGDRLYAFNTNDYRPTVISSGLMNTGFLPF FQPV
Sbjct  481  GTIPSYVIGSGTLPANTNIEVYTSPGGDRLYAFNTNDYRPTVISSGLMNTGFLPFAFQPV  540

Query  541  YIDYSPSGIGTTVFDHPA  558
            YIDYSPSGIGTTVFDHPA
Sbjct  541  YIDYSPSGIGTTVFDHPA  558


>gi|308375740|ref|ZP_07668099.1| hypothetical protein TMGG_00529 [Mycobacterium tuberculosis SUMu007]
 gi|308345295|gb|EFP34146.1| hypothetical protein TMGG_00529 [Mycobacterium tuberculosis SUMu007]
Length=350

 Score =  543 bits (1399),  Expect = 3e-152, Method: Compositional matrix adjust.
 Identities = 293/293 (100%), Positives = 293/293 (100%), Gaps = 0/293 (0%)

Query  266  DGRTVPLEIIHVTEPTVHANVNGGPTSTILVDTGSAGLVVSPEDVGGILGVLHMGLPTGL  325
            DGRTVPLEIIHVTEPTVHANVNGGPTSTILVDTGSAGLVVSPEDVGGILGVLHMGLPTGL
Sbjct  58   DGRTVPLEIIHVTEPTVHANVNGGPTSTILVDTGSAGLVVSPEDVGGILGVLHMGLPTGL  117

Query  326  SISGYSGGLYYIFATYTTTVDFGNGIVTAPTAVNVVLLSIPTSPFAISTYFSALLADPTT  385
            SISGYSGGLYYIFATYTTTVDFGNGIVTAPTAVNVVLLSIPTSPFAISTYFSALLADPTT
Sbjct  118  SISGYSGGLYYIFATYTTTVDFGNGIVTAPTAVNVVLLSIPTSPFAISTYFSALLADPTT  177

Query  386  TPFEAYFGAVGVDGVLGVGPNAVGPGPSIPTMALPGDLNQGVLIDAPAGELVFGPNPLPA  445
            TPFEAYFGAVGVDGVLGVGPNAVGPGPSIPTMALPGDLNQGVLIDAPAGELVFGPNPLPA
Sbjct  178  TPFEAYFGAVGVDGVLGVGPNAVGPGPSIPTMALPGDLNQGVLIDAPAGELVFGPNPLPA  237

Query  446  PNVEVVGSPITTLYVKIDGGTPIPVPSIIDSGGVTGTIPSYVIGSGTLPANTNIEVYTSP  505
            PNVEVVGSPITTLYVKIDGGTPIPVPSIIDSGGVTGTIPSYVIGSGTLPANTNIEVYTSP
Sbjct  238  PNVEVVGSPITTLYVKIDGGTPIPVPSIIDSGGVTGTIPSYVIGSGTLPANTNIEVYTSP  297

Query  506  GGDRLYAFNTNDYRPTVISSGLMNTGFLPFRFQPVYIDYSPSGIGTTVFDHPA  558
            GGDRLYAFNTNDYRPTVISSGLMNTGFLPFRFQPVYIDYSPSGIGTTVFDHPA
Sbjct  298  GGDRLYAFNTNDYRPTVISSGLMNTGFLPFRFQPVYIDYSPSGIGTTVFDHPA  350


>gi|183982936|ref|YP_001851227.1| PE-PGRS family protein [Mycobacterium marinum M]
 gi|183176262|gb|ACC41372.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=553

 Score =  390 bits (1001),  Expect = 4e-106, Method: Compositional matrix adjust.
 Identities = 209/301 (70%), Positives = 248/301 (83%), Gaps = 2/301 (0%)

Query  258  YGVSGPGGDGRTVPLEIIHVTEPTVHANVNGGPTSTILVDTGSAGLVVSPEDVGGILGVL  317
            YGVSG GGDGRTVPLE+++VTEP V+ NVNGG ++ +L+DTGSAGLV+  +DVGG LG+L
Sbjct  254  YGVSGAGGDGRTVPLEVVNVTEPVVNVNVNGGHSTPVLIDTGSAGLVMQVKDVGGPLGLL  313

Query  318  HMGLPTGLSISGYSGGLYYIFATYTTTVDFGNGIVTAPTAVNVVLLSIPTSPFAISTYFS  377
             MGLP+G+S+S YSGGL Y+FATY TTVDFGNGIVT+ T V+VVL SIPTSP+A++T+ +
Sbjct  314  RMGLPSGISMSAYSGGLTYLFATYPTTVDFGNGIVTSTTGVDVVLFSIPTSPYALTTWLN  373

Query  378  ALLADPTTTPFEAYFGAVGVDGVLGVGPNAVGPGPSIPTMALPGDLNQGVLIDAPAGELV  437
            AL ++P TTPF+AYF + GVDGVLGVGPNAVGPGPSIPT AL G L QG+LID   GELV
Sbjct  374  ALWSNPLTTPFDAYFQSAGVDGVLGVGPNAVGPGPSIPTQALGGGLGQGLLIDMKGGELV  433

Query  438  FGPNPLPAPNVEVVGSPITTLYVKIDGGTPIPVPSIIDSGGVTGTIPSYVIGSGTLPANT  497
            FGPNPL  P   + G+PI TL+V ++GG P+ VPSIIDSGGV GTIPS VIG  TLPANT
Sbjct  434  FGPNPL-TPEFSISGAPIATLWVSVNGGAPVAVPSIIDSGGVMGTIPSSVIGGSTLPANT  492

Query  498  NIEVYT-SPGGDRLYAFNTNDYRPTVISSGLMNTGFLPFRFQPVYIDYSPSGIGTTVFDH  556
            NI VYT +     +Y ++TNDY+PTVISSGLMNTGFLPF  QPVYIDYSP+G GTTVFD 
Sbjct  493  NITVYTDNTMTTEVYHYSTNDYQPTVISSGLMNTGFLPFWNQPVYIDYSPAGTGTTVFDM  552

Query  557  P  557
            P
Sbjct  553  P  553


>gi|308375739|ref|ZP_07668098.1| putative PE family protein [Mycobacterium tuberculosis SUMu007]
 gi|308345294|gb|EFP34145.1| putative PE family protein [Mycobacterium tuberculosis SUMu007]
Length=208

 Score =  219 bits (559),  Expect = 7e-55, Method: Compositional matrix adjust.
 Identities = 132/133 (99%), Positives = 133/133 (100%), Gaps = 0/133 (0%)

Query  1    VSFLVVVPEFLTSAAADVENIGSTLRAANAAAAASTTALAAAGADEVSAAVAALFARFGQ  60
            +SFLVVVPEFLTSAAADVENIGSTLRAANAAAAASTTALAAAGADEVSAAVAALFARFGQ
Sbjct  1    MSFLVVVPEFLTSAAADVENIGSTLRAANAAAAASTTALAAAGADEVSAAVAALFARFGQ  60

Query  61   EYQAVSAQASAFHQQFVQTLNSASGSYAAAEATIASQLQTAQHDLLGAVNAPTETLLGRP  120
            EYQAVSAQASAFHQQFVQTLNSASGSYAAAEATIASQLQTAQHDLLGAVNAPTETLLGRP
Sbjct  61   EYQAVSAQASAFHQQFVQTLNSASGSYAAAEATIASQLQTAQHDLLGAVNAPTETLLGRP  120

Query  121  LIGDGAPGTATSP  133
            LIGDGAPGTATSP
Sbjct  121  LIGDGAPGTATSP  133


>gi|289750562|ref|ZP_06509940.1| PE-PGRS family protein [Mycobacterium tuberculosis T92]
 gi|289691149|gb|EFD58578.1| PE-PGRS family protein [Mycobacterium tuberculosis T92]
Length=549

 Score =  219 bits (557),  Expect = 1e-54, Method: Compositional matrix adjust.
 Identities = 132/133 (99%), Positives = 133/133 (100%), Gaps = 0/133 (0%)

Query  1    VSFLVVVPEFLTSAAADVENIGSTLRAANAAAAASTTALAAAGADEVSAAVAALFARFGQ  60
            +SFLVVVPEFLTSAAADVENIGSTLRAANAAAAASTTALAAAGADEVSAAVAALFARFGQ
Sbjct  1    MSFLVVVPEFLTSAAADVENIGSTLRAANAAAAASTTALAAAGADEVSAAVAALFARFGQ  60

Query  61   EYQAVSAQASAFHQQFVQTLNSASGSYAAAEATIASQLQTAQHDLLGAVNAPTETLLGRP  120
            EYQAVSAQASAFHQQFVQTLNSASGSYAAAEATIASQLQTAQHDLLGAVNAPTETLLGRP
Sbjct  61   EYQAVSAQASAFHQQFVQTLNSASGSYAAAEATIASQLQTAQHDLLGAVNAPTETLLGRP  120

Query  121  LIGDGAPGTATSP  133
            LIGDGAPGTATSP
Sbjct  121  LIGDGAPGTATSP  133


>gi|118619532|ref|YP_907864.1| PE-PGRS family protein [Mycobacterium ulcerans Agy99]
 gi|118571642|gb|ABL06393.1| PE-PGRS family protein [Mycobacterium ulcerans Agy99]
Length=480

 Score =  182 bits (462),  Expect = 1e-43, Method: Compositional matrix adjust.
 Identities = 97/152 (64%), Positives = 116/152 (77%), Gaps = 0/152 (0%)

Query  1    VSFLVVVPEFLTSAAADVENIGSTLRAANAAAAASTTALAAAGADEVSAAVAALFARFGQ  60
            +S+L+V PE LTSAA D+E I S L  AN AAA  TT + AAGADEVSAAVA+LFA +GQ
Sbjct  1    MSYLLVAPELLTSAATDLEGIASALSTANLAAAVPTTGMLAAGADEVSAAVASLFAGYGQ  60

Query  61   EYQAVSAQASAFHQQFVQTLNSASGSYAAAEATIASQLQTAQHDLLGAVNAPTETLLGRP  120
             YQ++S QA+AF  QF+Q +N A G+Y AAEA   S LQ  +  +LG +NAPT+TLLGRP
Sbjct  61   AYQSISLQANAFQAQFIQAINGAGGAYVAAEAASTSPLQAFEDTVLGVINAPTQTLLGRP  120

Query  121  LIGDGAPGTATSPNGGAGGLLYGNGGNGYSAT  152
            LIGDGA GT  +PNGGAGG LYGNGGNG+S T
Sbjct  121  LIGDGAAGTVANPNGGAGGFLYGNGGNGFSQT  152


>gi|253799995|ref|YP_003032996.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 1435]
 gi|253321498|gb|ACT26101.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 1435]
 gi|328459737|gb|AEB05160.1| hypothetical protein TBSG_03031 [Mycobacterium tuberculosis KZN 
4207]
Length=933

 Score =  178 bits (452),  Expect = 2e-42, Method: Compositional matrix adjust.
 Identities = 129/291 (45%), Positives = 170/291 (59%), Gaps = 29/291 (9%)

Query  269  TVPLEIIHVTEPTVHANVNGGPTSTILVDTGSAGLVVSPEDVGGILGVLHMGLPTGLSIS  328
            TVPL++++ TEP V  ++NGG    +L+DTGS GLV+  + +       + G   G   +
Sbjct  668  TVPLQLVNTTEPVVFISLNGGQMVPVLLDTGSTGLVMDSQFL-----TQNFGPVIGTGTA  722

Query  329  GYSGGLYYIFATYTTTVDFGNGIVTAPTAVNVVLLSIPTSPFAISTYFSALLADPTTTPF  388
            GY+GGL Y + TY+TTVDFGNG++T PT+VNVV  S   SP  +  + S           
Sbjct  723  GYAGGLTYNYNTYSTTVDFGNGLLTLPTSVNVVTSS---SPGTLGNFLS-----------  768

Query  389  EAYFGAVGVDGVLGVGPNAVGPGPSIPTMALPGDLNQGVLIDAPAGELVFGPNPLPAPNV  448
                   G  GVLG+GPN   PG S    A+PG LN GVLID  AG L FGPN L    +
Sbjct  769  -----RSGAVGVLGIGPNNGFPGTSSIVTAMPGLLNNGVLIDESAGILQFGPNTLTG-GI  822

Query  449  EVVGSPITTLYVKIDGGTPIPVPSIIDSGGVTGTIPSYVIGS---GTLPANTNIEVYTSP  505
             + G+PI+T+ V+ID G     P + DSGG+ GTIPS +      G +PA T I VYTS 
Sbjct  823  TISGAPISTVAVQIDNGPLQQAPVMFDSGGINGTIPSALASLPSGGFVPAGTTISVYTSD  882

Query  506  GGDRLYAFNTNDYR-PTVISSGLMNTGFLPFRFQPVYIDYSPSGIGTTVFD  555
            G   LY++ T     P V S G+MNTG +PF  QP+Y+ YSP+ IGTT F+
Sbjct  883  GQTLLYSYTTTATNTPFVTSGGVMNTGHVPFAQQPIYVSYSPTAIGTTTFN  933


 Score =  125 bits (314),  Expect = 2e-26, Method: Compositional matrix adjust.
 Identities = 68/128 (54%), Positives = 87/128 (68%), Gaps = 1/128 (0%)

Query  1    VSFLVVVPEFLTSAAADVENIGSTLRAANAAAAASTTALAAAGADEVSAAVAALFARFGQ  60
            +SF+V  P  L SAA+D+  I S +  ANA AA  TTALA A ADEVSAA+AALF+ + +
Sbjct  11   MSFVVTAPPVLASAASDLGGIASMISEANAMAAVRTTALAPAAADEVSAAIAALFSSYAR  70

Query  61   EYQAVSAQASAFHQQFVQTLNSASGSYAAAEATIASQLQTAQHDLLGAVNAPTETLLGRP  120
            +YQ +S Q +AFH QF QTL +A   YA  +      L+T Q  +LG +NAPT+TL+GRP
Sbjct  71   DYQTLSVQVTAFHVQFAQTLTNAGQLYAVVDVGNGVLLKTEQQ-VLGVINAPTQTLVGRP  129

Query  121  LIGDGAPG  128
            LIGDG  G
Sbjct  130  LIGDGTHG  137


>gi|339293981|gb|AEJ46092.1| PE-PGRS family protein [Mycobacterium tuberculosis CCDC5079]
Length=923

 Score =  178 bits (451),  Expect = 3e-42, Method: Compositional matrix adjust.
 Identities = 129/291 (45%), Positives = 170/291 (59%), Gaps = 29/291 (9%)

Query  269  TVPLEIIHVTEPTVHANVNGGPTSTILVDTGSAGLVVSPEDVGGILGVLHMGLPTGLSIS  328
            TVPL++++ TEP V  ++NGG    +L+DTGS GLV+  + +       + G   G   +
Sbjct  658  TVPLQLVNTTEPVVFISLNGGQMVPVLLDTGSTGLVMDSQFL-----TQNFGPVIGTGTA  712

Query  329  GYSGGLYYIFATYTTTVDFGNGIVTAPTAVNVVLLSIPTSPFAISTYFSALLADPTTTPF  388
            GY+GGL Y + TY+TTVDFGNG++T PT+VNVV  S   SP  +  + S           
Sbjct  713  GYAGGLTYNYNTYSTTVDFGNGLLTLPTSVNVVTSS---SPGTLGNFLS-----------  758

Query  389  EAYFGAVGVDGVLGVGPNAVGPGPSIPTMALPGDLNQGVLIDAPAGELVFGPNPLPAPNV  448
                   G  GVLG+GPN   PG S    A+PG LN GVLID  AG L FGPN L    +
Sbjct  759  -----RSGAVGVLGIGPNNGFPGTSSIVTAMPGLLNNGVLIDESAGILQFGPNTLTG-GI  812

Query  449  EVVGSPITTLYVKIDGGTPIPVPSIIDSGGVTGTIPSYVIGS---GTLPANTNIEVYTSP  505
             + G+PI+T+ V+ID G     P + DSGG+ GTIPS +      G +PA T I VYTS 
Sbjct  813  TISGAPISTVAVQIDNGPLQQAPVMFDSGGINGTIPSALASLPSGGFVPAGTTISVYTSD  872

Query  506  GGDRLYAFNTNDYR-PTVISSGLMNTGFLPFRFQPVYIDYSPSGIGTTVFD  555
            G   LY++ T     P V S G+MNTG +PF  QP+Y+ YSP+ IGTT F+
Sbjct  873  GQTLLYSYTTTATNTPFVTSGGVMNTGHVPFAQQPIYVSYSPTAIGTTTFN  923


 Score =  125 bits (314),  Expect = 2e-26, Method: Compositional matrix adjust.
 Identities = 68/128 (54%), Positives = 87/128 (68%), Gaps = 1/128 (0%)

Query  1    VSFLVVVPEFLTSAAADVENIGSTLRAANAAAAASTTALAAAGADEVSAAVAALFARFGQ  60
            +SF+V  P  L SAA+D+  I S +  ANA AA  TTALA A ADEVSAA+AALF+ + +
Sbjct  1    MSFVVTAPPVLASAASDLGGIASMISEANAMAAVRTTALAPAAADEVSAAIAALFSSYAR  60

Query  61   EYQAVSAQASAFHQQFVQTLNSASGSYAAAEATIASQLQTAQHDLLGAVNAPTETLLGRP  120
            +YQ +S Q +AFH QF QTL +A   YA  +      L+T Q  +LG +NAPT+TL+GRP
Sbjct  61   DYQTLSVQVTAFHVQFAQTLTNAGQLYAVVDVGNGVLLKTEQQ-VLGVINAPTQTLVGRP  119

Query  121  LIGDGAPG  128
            LIGDG  G
Sbjct  120  LIGDGTHG  127


>gi|31792166|ref|NP_854659.1| PE-PGRS family protein [Mycobacterium bovis AF2122/97]
 gi|57116805|ref|YP_177773.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Rv]
 gi|121636903|ref|YP_977126.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur 
1173P2]
 10 more sequence titles
 Length=923

 Score =  178 bits (451),  Expect = 3e-42, Method: Compositional matrix adjust.
 Identities = 129/291 (45%), Positives = 170/291 (59%), Gaps = 29/291 (9%)

Query  269  TVPLEIIHVTEPTVHANVNGGPTSTILVDTGSAGLVVSPEDVGGILGVLHMGLPTGLSIS  328
            TVPL++++ TEP V  ++NGG    +L+DTGS GLV+  + +       + G   G   +
Sbjct  658  TVPLQLVNTTEPVVFISLNGGQMVPVLLDTGSTGLVMDSQFL-----TQNFGPVIGTGTA  712

Query  329  GYSGGLYYIFATYTTTVDFGNGIVTAPTAVNVVLLSIPTSPFAISTYFSALLADPTTTPF  388
            GY+GGL Y + TY+TTVDFGNG++T PT+VNVV  S   SP  +  + S           
Sbjct  713  GYAGGLTYNYNTYSTTVDFGNGLLTLPTSVNVVTSS---SPGTLGNFLS-----------  758

Query  389  EAYFGAVGVDGVLGVGPNAVGPGPSIPTMALPGDLNQGVLIDAPAGELVFGPNPLPAPNV  448
                   G  GVLG+GPN   PG S    A+PG LN GVLID  AG L FGPN L    +
Sbjct  759  -----RSGAVGVLGIGPNNGFPGTSSIVTAMPGLLNNGVLIDESAGILQFGPNTLTG-GI  812

Query  449  EVVGSPITTLYVKIDGGTPIPVPSIIDSGGVTGTIPSYVIGS---GTLPANTNIEVYTSP  505
             + G+PI+T+ V+ID G     P + DSGG+ GTIPS +      G +PA T I VYTS 
Sbjct  813  TISGAPISTVAVQIDNGPLQQAPVMFDSGGINGTIPSALASLPSGGFVPAGTTISVYTSD  872

Query  506  GGDRLYAFNTNDYR-PTVISSGLMNTGFLPFRFQPVYIDYSPSGIGTTVFD  555
            G   LY++ T     P V S G+MNTG +PF  QP+Y+ YSP+ IGTT F+
Sbjct  873  GQTLLYSYTTTATNTPFVTSGGVMNTGHVPFAQQPIYVSYSPTAIGTTTFN  923


 Score =  125 bits (314),  Expect = 2e-26, Method: Compositional matrix adjust.
 Identities = 68/128 (54%), Positives = 87/128 (68%), Gaps = 1/128 (0%)

Query  1    VSFLVVVPEFLTSAAADVENIGSTLRAANAAAAASTTALAAAGADEVSAAVAALFARFGQ  60
            +SF+V  P  L SAA+D+  I S +  ANA AA  TTALA A ADEVSAA+AALF+ + +
Sbjct  1    MSFVVTAPPVLASAASDLGGIASMISEANAMAAVRTTALAPAAADEVSAAIAALFSSYAR  60

Query  61   EYQAVSAQASAFHQQFVQTLNSASGSYAAAEATIASQLQTAQHDLLGAVNAPTETLLGRP  120
            +YQ +S Q +AFH QF QTL +A   YA  +      L+T Q  +LG +NAPT+TL+GRP
Sbjct  61   DYQTLSVQVTAFHVQFAQTLTNAGQLYAVVDVGNGVLLKTEQQ-VLGVINAPTQTLVGRP  119

Query  121  LIGDGAPG  128
            LIGDG  G
Sbjct  120  LIGDGTHG  127


>gi|148660757|ref|YP_001282280.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra]
 gi|148504909|gb|ABQ72718.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra]
Length=923

 Score =  178 bits (451),  Expect = 3e-42, Method: Compositional matrix adjust.
 Identities = 129/291 (45%), Positives = 170/291 (59%), Gaps = 29/291 (9%)

Query  269  TVPLEIIHVTEPTVHANVNGGPTSTILVDTGSAGLVVSPEDVGGILGVLHMGLPTGLSIS  328
            TVPL++++ TEP V  ++NGG    +L+DTGS GLV+  + +       + G   G   +
Sbjct  658  TVPLQLVNTTEPVVFISLNGGQMVPVLLDTGSTGLVMDSQFL-----TQNFGPVIGTGTA  712

Query  329  GYSGGLYYIFATYTTTVDFGNGIVTAPTAVNVVLLSIPTSPFAISTYFSALLADPTTTPF  388
            GY+GGL Y + TY+TTVDFGNG++T PT+VNVV  S   SP  +  + S           
Sbjct  713  GYAGGLTYNYNTYSTTVDFGNGLLTLPTSVNVVTSS---SPGTLGNFLS-----------  758

Query  389  EAYFGAVGVDGVLGVGPNAVGPGPSIPTMALPGDLNQGVLIDAPAGELVFGPNPLPAPNV  448
                   G  GVLG+GPN   PG S    A+PG LN GVLID  AG L FGPN L    +
Sbjct  759  -----RSGAVGVLGIGPNNGFPGTSSIVTAMPGLLNNGVLIDESAGILQFGPNTLTG-GI  812

Query  449  EVVGSPITTLYVKIDGGTPIPVPSIIDSGGVTGTIPSYVIGS---GTLPANTNIEVYTSP  505
             + G+PI+T+ V+ID G     P + DSGG+ GTIPS +      G +PA T I VYTS 
Sbjct  813  TISGAPISTVAVQIDNGPLQQAPVMFDSGGINGTIPSALASLPSGGFVPAGTTISVYTSD  872

Query  506  GGDRLYAFNTNDYR-PTVISSGLMNTGFLPFRFQPVYIDYSPSGIGTTVFD  555
            G   LY++ T     P V S G+MNTG +PF  QP+Y+ YSP+ IGTT F+
Sbjct  873  GQTLLYSYTTTATNTPFVTSGGVMNTGHVPFAQQPIYVSYSPTAIGTTTFN  923


 Score =  125 bits (313),  Expect = 2e-26, Method: Compositional matrix adjust.
 Identities = 68/128 (54%), Positives = 87/128 (68%), Gaps = 1/128 (0%)

Query  1    VSFLVVVPEFLTSAAADVENIGSTLRAANAAAAASTTALAAAGADEVSAAVAALFARFGQ  60
            +SF+V  P  L SAA+D+  I S +  ANA AA  TTALA A ADEVSAA+AALF+ + +
Sbjct  1    MSFVVTAPPVLASAASDLGGIASMISEANAMAAVRTTALAPAAADEVSAAIAALFSSYAR  60

Query  61   EYQAVSAQASAFHQQFVQTLNSASGSYAAAEATIASQLQTAQHDLLGAVNAPTETLLGRP  120
            +YQ +S Q +AFH QF QTL +A   YA  +      L+T Q  +LG +NAPT+TL+GRP
Sbjct  61   DYQTLSVQVTAFHVQFAQTLTNAGQLYAVVDVGNGVLLKTEQQ-VLGVINAPTQTLVGRP  119

Query  121  LIGDGAPG  128
            LIGDG  G
Sbjct  120  LIGDGTHG  127


>gi|340625989|ref|YP_004744441.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
 gi|340004179|emb|CCC43318.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
Length=1081

 Score =  177 bits (450),  Expect = 4e-42, Method: Compositional matrix adjust.
 Identities = 129/291 (45%), Positives = 170/291 (59%), Gaps = 29/291 (9%)

Query  269   TVPLEIIHVTEPTVHANVNGGPTSTILVDTGSAGLVVSPEDVGGILGVLHMGLPTGLSIS  328
             TVPL++++ TEP V  ++NGG    +L+DTGS GLV+  + +       + G   G   +
Sbjct  816   TVPLQLVNTTEPVVFISLNGGQMVPVLLDTGSTGLVMDSQFL-----TQNFGPVIGTGTA  870

Query  329   GYSGGLYYIFATYTTTVDFGNGIVTAPTAVNVVLLSIPTSPFAISTYFSALLADPTTTPF  388
             GY+GGL Y + TY+TTVDFGNG++T PT+VNVV  S   SP  +  + S           
Sbjct  871   GYAGGLTYNYNTYSTTVDFGNGLLTLPTSVNVVTSS---SPGTLGNFLS-----------  916

Query  389   EAYFGAVGVDGVLGVGPNAVGPGPSIPTMALPGDLNQGVLIDAPAGELVFGPNPLPAPNV  448
                    G  GVLG+GPN   PG S    A+PG LN GVLID  AG L FGPN L    +
Sbjct  917   -----RSGAVGVLGIGPNNGFPGTSSIVTAMPGLLNNGVLIDESAGILQFGPNTLTG-GI  970

Query  449   EVVGSPITTLYVKIDGGTPIPVPSIIDSGGVTGTIPSYVIGS---GTLPANTNIEVYTSP  505
              + G+PI+T+ V+ID G     P + DSGG+ GTIPS +      G +PA T I VYTS 
Sbjct  971   TISGAPISTVAVQIDNGPLQQAPVMFDSGGINGTIPSALASLPSGGFVPAGTTISVYTSD  1030

Query  506   GGDRLYAFNTNDYR-PTVISSGLMNTGFLPFRFQPVYIDYSPSGIGTTVFD  555
             G   LY++ T     P V S G+MNTG +PF  QP+Y+ YSP+ IGTT F+
Sbjct  1031  GQTLLYSYTTTATNTPFVTSGGVMNTGHVPFAQQPIYVSYSPTAIGTTTFN  1081


 Score =  129 bits (323),  Expect = 2e-27, Method: Compositional matrix adjust.
 Identities = 70/128 (55%), Positives = 88/128 (69%), Gaps = 1/128 (0%)

Query  1    VSFLVVVPEFLTSAAADVENIGSTLRAANAAAAASTTALAAAGADEVSAAVAALFARFGQ  60
            +SF+V  P  L SAA+D+  I S +  ANA AA  TTALA A ADEVSAA+AALF+ + +
Sbjct  1    MSFVVTAPPVLASAASDLGGIASMISEANAMAAVRTTALAPAAADEVSAAIAALFSSYAR  60

Query  61   EYQAVSAQASAFHQQFVQTLNSASGSYAAAEATIASQLQTAQHDLLGAVNAPTETLLGRP  120
            +YQ +S Q +AFH QFVQTL +A   YA  +      L+T Q  +LG +NAPT+TLLGRP
Sbjct  61   DYQTLSVQVTAFHVQFVQTLTNAGQLYAVVDVGNGVLLKTEQQ-VLGVINAPTQTLLGRP  119

Query  121  LIGDGAPG  128
            LIGDG  G
Sbjct  120  LIGDGTHG  127


>gi|289446553|ref|ZP_06436297.1| PE-PGRS family protein [Mycobacterium tuberculosis CPHL_A]
 gi|289419511|gb|EFD16712.1| PE-PGRS family protein [Mycobacterium tuberculosis CPHL_A]
Length=496

 Score =  177 bits (448),  Expect = 6e-42, Method: Compositional matrix adjust.
 Identities = 129/291 (45%), Positives = 170/291 (59%), Gaps = 29/291 (9%)

Query  269  TVPLEIIHVTEPTVHANVNGGPTSTILVDTGSAGLVVSPEDVGGILGVLHMGLPTGLSIS  328
            TVPL++++ TEP V  ++NGG    +L+DTGS GLV+  + +       + G   G   +
Sbjct  231  TVPLQLVNTTEPVVFISLNGGQMVPVLLDTGSTGLVMDSQFL-----TQNFGPVIGTGTA  285

Query  329  GYSGGLYYIFATYTTTVDFGNGIVTAPTAVNVVLLSIPTSPFAISTYFSALLADPTTTPF  388
            GY+GGL Y + TY+TTVDFGNG++T PT+VNVV  S   SP  +  + S           
Sbjct  286  GYAGGLTYNYNTYSTTVDFGNGLLTLPTSVNVVTSS---SPGTLGNFLS-----------  331

Query  389  EAYFGAVGVDGVLGVGPNAVGPGPSIPTMALPGDLNQGVLIDAPAGELVFGPNPLPAPNV  448
                   G  GVLG+GPN   PG S    A+PG LN GVLID  AG L FGPN L    +
Sbjct  332  -----RSGAVGVLGIGPNNGFPGTSSIVTAMPGLLNNGVLIDESAGILQFGPNTLTG-GI  385

Query  449  EVVGSPITTLYVKIDGGTPIPVPSIIDSGGVTGTIPSYVIGS---GTLPANTNIEVYTSP  505
             + G+PI+T+ V+ID G     P + DSGG+ GTIPS +      G +PA T I VYTS 
Sbjct  386  TISGAPISTVAVQIDNGPLQQAPVMFDSGGINGTIPSALASLPSGGFVPAGTTISVYTSD  445

Query  506  GGDRLYAFNTN-DYRPTVISSGLMNTGFLPFRFQPVYIDYSPSGIGTTVFD  555
            G   LY++ T     P V S G+MNTG +PF  QP+Y+ YSP+ IGTT F+
Sbjct  446  GQTLLYSYTTTATNTPFVTSGGVMNTGHVPFAQQPIYVSYSPTAIGTTTFN  496


>gi|224989375|ref|YP_002644062.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172]
 gi|224772488|dbj|BAH25294.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172]
Length=440

 Score =  176 bits (446),  Expect = 1e-41, Method: Compositional matrix adjust.
 Identities = 129/291 (45%), Positives = 170/291 (59%), Gaps = 29/291 (9%)

Query  269  TVPLEIIHVTEPTVHANVNGGPTSTILVDTGSAGLVVSPEDVGGILGVLHMGLPTGLSIS  328
            TVPL++++ TEP V  ++NGG    +L+DTGS GLV+  + +       + G   G   +
Sbjct  175  TVPLQLVNTTEPVVFISLNGGQMVPVLLDTGSTGLVMDSQFL-----TQNFGPVIGTGTA  229

Query  329  GYSGGLYYIFATYTTTVDFGNGIVTAPTAVNVVLLSIPTSPFAISTYFSALLADPTTTPF  388
            GY+GGL Y + TY+TTVDFGNG++T PT+VNVV  S   SP  +  + S           
Sbjct  230  GYAGGLTYNYNTYSTTVDFGNGLLTLPTSVNVVTSS---SPGTLGNFLS-----------  275

Query  389  EAYFGAVGVDGVLGVGPNAVGPGPSIPTMALPGDLNQGVLIDAPAGELVFGPNPLPAPNV  448
                   G  GVLG+GPN   PG S    A+PG LN GVLID  AG L FGPN L    +
Sbjct  276  -----RSGAVGVLGIGPNNGFPGTSSIVTAMPGLLNNGVLIDESAGILQFGPNTLTG-GI  329

Query  449  EVVGSPITTLYVKIDGGTPIPVPSIIDSGGVTGTIPSYVIGS---GTLPANTNIEVYTSP  505
             + G+PI+T+ V+ID G     P + DSGG+ GTIPS +      G +PA T I VYTS 
Sbjct  330  TISGAPISTVAVQIDNGPLQQAPVMFDSGGINGTIPSALASLPSGGFVPAGTTISVYTSD  389

Query  506  GGDRLYAFNTN-DYRPTVISSGLMNTGFLPFRFQPVYIDYSPSGIGTTVFD  555
            G   LY++ T     P V S G+MNTG +PF  QP+Y+ YSP+ IGTT F+
Sbjct  390  GQTLLYSYTTTATNTPFVTSGGVMNTGHVPFAQQPIYVSYSPTAIGTTTFN  440


>gi|183983189|ref|YP_001851480.1| PE-PGRS family protein [Mycobacterium marinum M]
 gi|183176515|gb|ACC41625.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=597

 Score =  172 bits (436),  Expect = 1e-40, Method: Compositional matrix adjust.
 Identities = 99/153 (65%), Positives = 117/153 (77%), Gaps = 0/153 (0%)

Query  1    VSFLVVVPEFLTSAAADVENIGSTLRAANAAAAASTTALAAAGADEVSAAVAALFARFGQ  60
            +SF+ V  E L +AA+DV  IGS+L+AAN  AAA T  + AAGADEVS A+AALF+  GQ
Sbjct  1    MSFVSVTQEALAAAASDVGVIGSSLQAANVVAAAPTAGVLAAGADEVSVAMAALFSGHGQ  60

Query  61   EYQAVSAQASAFHQQFVQTLNSASGSYAAAEATIASQLQTAQHDLLGAVNAPTETLLGRP  120
             YQA+SAQA+AFH QF+Q L +A G+YAAAE    S LQ  +  +LGAVNAPT+ LLGRP
Sbjct  61   AYQALSAQANAFHAQFLQALTNAGGAYAAAEVANVSPLQGVEQGVLGAVNAPTQALLGRP  120

Query  121  LIGDGAPGTATSPNGGAGGLLYGNGGNGYSATA  153
            LIGDG  GTA SPNGGAGGLLYGNGG GYS T+
Sbjct  121  LIGDGTAGTAASPNGGAGGLLYGNGGAGYSYTS  153


>gi|289555241|ref|ZP_06444451.1| LOW QUALITY PROTEIN: predicted protein [Mycobacterium tuberculosis 
KZN 605]
 gi|289439873|gb|EFD22366.1| LOW QUALITY PROTEIN: predicted protein [Mycobacterium tuberculosis 
KZN 605]
Length=417

 Score =  170 bits (430),  Expect = 7e-40, Method: Compositional matrix adjust.
 Identities = 135/334 (41%), Positives = 178/334 (54%), Gaps = 55/334 (16%)

Query  226  GANGGAGGLGDGVGVDRGTGGAGGRGGLLYGGYGVSGPGGDGRTVPLEIIHVTEPTVHAN  285
            G NG  GG+G     +                           TVPL++++ TEP V  +
Sbjct  135  GLNGATGGIGSTTLTN--------------------------ATVPLQLVNTTEPVVFIS  168

Query  286  VNGGPTSTILVDTGSAGLVVSPEDVGGILGVLHMGLPTGLSISGYSGGLYYIFATYTTTV  345
            +NGG    +L+DTGS GLV+  + +       + G   G   +GY+GGL Y + TY+TTV
Sbjct  169  LNGGQMVPVLLDTGSTGLVMDSQFL-----TQNFGPVIGTGTAGYAGGLTYNYNTYSTTV  223

Query  346  DFGNGIVTAPTAVNVVLLSIPTSPFAISTYFSALLADPTTTPFEAYFGAVGVDGVLGVGP  405
            DFGNG++T PT+VNVV  S   SP  +  + S                  G  GVLG+GP
Sbjct  224  DFGNGLLTLPTSVNVVTSS---SPGTLGNFLS----------------RSGAVGVLGIGP  264

Query  406  NAVGPGPSIPTMALPGDLNQGVLIDAPAGELVFGPNPLPAPNVEVVGSPITTLYVKIDGG  465
            N   PG S    A+PG LN GVLID  AG L FGPN L    + + G+PI+T+ V+ID G
Sbjct  265  NNGFPGTSSIVTAMPGLLNNGVLIDESAGILQFGPNTLTG-GITISGAPISTVAVQIDNG  323

Query  466  TPIPVPSIIDSGGVTGTIPSYVIGS---GTLPANTNIEVYTSPGGDRLYAFNTN-DYRPT  521
                 P + DSGG+ GTIPS +      G +PA T I VYTS G   LY++ T     P 
Sbjct  324  PLQQAPVMFDSGGINGTIPSALASLPSGGFVPAGTTISVYTSDGQTLLYSYTTTATNTPF  383

Query  522  VISSGLMNTGFLPFRFQPVYIDYSPSGIGTTVFD  555
            V S G+MNTG +PF  QP+Y+ YSP+ IGTT F+
Sbjct  384  VTSGGVMNTGHVPFAQQPIYVSYSPTAIGTTTFN  417


>gi|118618801|ref|YP_907133.1| PE-PGRS family protein [Mycobacterium ulcerans Agy99]
 gi|118570911|gb|ABL05662.1| PE-PGRS family protein [Mycobacterium ulcerans Agy99]
Length=605

 Score =  166 bits (420),  Expect = 9e-39, Method: Compositional matrix adjust.
 Identities = 96/153 (63%), Positives = 115/153 (76%), Gaps = 0/153 (0%)

Query  1    VSFLVVVPEFLTSAAADVENIGSTLRAANAAAAASTTALAAAGADEVSAAVAALFARFGQ  60
            +SF+ V  E L +AA+DV  IGS+L+AAN + AA T  + AAGADEVS A+AALF+  GQ
Sbjct  1    MSFVSVTQEALAAAASDVGVIGSSLQAANMSVAAPTAGVLAAGADEVSVAMAALFSGHGQ  60

Query  61   EYQAVSAQASAFHQQFVQTLNSASGSYAAAEATIASQLQTAQHDLLGAVNAPTETLLGRP  120
             YQ +SAQA+AFH QF+Q L +A G+YAAAE    S LQ  +  +LG VNAP + LLGRP
Sbjct  61   AYQTLSAQANAFHAQFLQALTNAGGAYAAAEVANLSPLQGVEQGVLGVVNAPAQALLGRP  120

Query  121  LIGDGAPGTATSPNGGAGGLLYGNGGNGYSATA  153
            LIGDGA GTA SPNGGAGGLLYGNGG GYS T+
Sbjct  121  LIGDGAAGTAASPNGGAGGLLYGNGGAGYSYTS  153


>gi|183985289|ref|YP_001853580.1| PE-PGRS family protein [Mycobacterium marinum M]
 gi|183178615|gb|ACC43725.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=723

 Score =  166 bits (419),  Expect = 1e-38, Method: Compositional matrix adjust.
 Identities = 99/152 (66%), Positives = 118/152 (78%), Gaps = 0/152 (0%)

Query  1    VSFLVVVPEFLTSAAADVENIGSTLRAANAAAAASTTALAAAGADEVSAAVAALFARFGQ  60
            +S+L+V PE LTSAA D+E I S L  AN AAA  TT + AAGADEVSAAVA+LFA +GQ
Sbjct  1    MSYLLVTPELLTSAATDLEGIASALSTANLAAAVPTTGVLAAGADEVSAAVASLFAGYGQ  60

Query  61   EYQAVSAQASAFHQQFVQTLNSASGSYAAAEATIASQLQTAQHDLLGAVNAPTETLLGRP  120
             YQ++S QA+AF  QF+Q +N A G+YAAAEA   S LQ  +  +LG +NAPT+TLLGRP
Sbjct  61   AYQSISLQANAFQAQFIQAINGAGGAYAAAEAASTSPLQAFEDTVLGVINAPTQTLLGRP  120

Query  121  LIGDGAPGTATSPNGGAGGLLYGNGGNGYSAT  152
            LIGDGA GTA +PNGGAGG LYGNGGNG+S T
Sbjct  121  LIGDGAAGTAANPNGGAGGFLYGNGGNGFSQT  152


>gi|240172373|ref|ZP_04751032.1| PE-PGRS family protein [Mycobacterium kansasii ATCC 12478]
Length=534

 Score =  156 bits (395),  Expect = 8e-36, Method: Compositional matrix adjust.
 Identities = 111/154 (73%), Positives = 121/154 (79%), Gaps = 0/154 (0%)

Query  1    VSFLVVVPEFLTSAAADVENIGSTLRAANAAAAASTTALAAAGADEVSAAVAALFARFGQ  60
            +S LVV PE + SAAAD+E++ S L AANAAAA  TT LAAAG DEVSAAVA LFA FGQ
Sbjct  1    MSLLVVAPEIVASAAADLESLYSALNAANAAAAGPTTVLAAAGIDEVSAAVATLFAGFGQ  60

Query  61   EYQAVSAQASAFHQQFVQTLNSASGSYAAAEATIASQLQTAQHDLLGAVNAPTETLLGRP  120
            EYQ +S QA+ F QQFV TLNS+ G+Y A EA   S LQTAQ DLLGAVNAPT  LLGRP
Sbjct  61   EYQVLSTQANTFFQQFVATLNSSGGTYQAGEAQAVSLLQTAQSDLLGAVNAPTLALLGRP  120

Query  121  LIGDGAPGTATSPNGGAGGLLYGNGGNGYSATAS  154
            LIGDGA GT +SPNG AGGLL GNGGNGYS TAS
Sbjct  121  LIGDGAHGTVSSPNGAAGGLLLGNGGNGYSQTAS  154


>gi|183982972|ref|YP_001851263.1| PE-PGRS family protein [Mycobacterium marinum M]
 gi|183176298|gb|ACC41408.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=609

 Score =  152 bits (385),  Expect = 1e-34, Method: Compositional matrix adjust.
 Identities = 96/153 (63%), Positives = 119/153 (78%), Gaps = 0/153 (0%)

Query  1    VSFLVVVPEFLTSAAADVENIGSTLRAANAAAAASTTALAAAGADEVSAAVAALFARFGQ  60
            +++LV VP+ + +AA ++  IGS++  A+AAAAA TT LAAAGADE+SAA+A LF    Q
Sbjct  1    MTYLVTVPQTVATAAGNLAAIGSSITDASAAAAAPTTELAAAGADEISAAIAQLFGTHAQ  60

Query  61   EYQAVSAQASAFHQQFVQTLNSASGSYAAAEATIASQLQTAQHDLLGAVNAPTETLLGRP  120
             YQ +SAQA AFH QF ++L++ASGSYA AEAT    LQ+ Q DLLG VNAPT+ LLGRP
Sbjct  61   IYQRISAQAMAFHDQFARSLSAASGSYANAEATNTLTLQSVQQDLLGLVNAPTQALLGRP  120

Query  121  LIGDGAPGTATSPNGGAGGLLYGNGGNGYSATA  153
            LIG+GA GTA  PNG AGGLLYGNGG+GYS T+
Sbjct  121  LIGNGANGTAADPNGEAGGLLYGNGGDGYSFTS  153


>gi|183982127|ref|YP_001850418.1| PE-PGRS family protein [Mycobacterium marinum M]
 gi|183175453|gb|ACC40563.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=546

 Score =  152 bits (383),  Expect = 2e-34, Method: Compositional matrix adjust.
 Identities = 93/150 (62%), Positives = 121/150 (81%), Gaps = 0/150 (0%)

Query  1    VSFLVVVPEFLTSAAADVENIGSTLRAANAAAAASTTALAAAGADEVSAAVAALFARFGQ  60
            ++F++  PE +++AA +V +IG++L AANAA AASTT++ +AGAD+VS A+AAL +  G 
Sbjct  1    MAFVIAAPELVSAAAENVASIGTSLGAANAAVAASTTSVLSAGADDVSQAIAALLSSHGA  60

Query  61   EYQAVSAQASAFHQQFVQTLNSASGSYAAAEATIASQLQTAQHDLLGAVNAPTETLLGRP  120
            +YQA+SAQA+ FHQ F+Q LNSA G+YA AEA   S LQT + ++LGA+N PT+ + GRP
Sbjct  61   QYQALSAQAAQFHQGFMQLLNSAGGAYAGAEAANVSPLQTLESNVLGALNTPTQAIFGRP  120

Query  121  LIGDGAPGTATSPNGGAGGLLYGNGGNGYS  150
            LIGDGA GTATSPNGGAGG LYGNGGNGYS
Sbjct  121  LIGDGANGTATSPNGGAGGFLYGNGGNGYS  150


>gi|289448241|ref|ZP_06437985.1| PE-PGRS family protein [Mycobacterium tuberculosis CPHL_A]
 gi|289421199|gb|EFD18400.1| PE-PGRS family protein [Mycobacterium tuberculosis CPHL_A]
Length=540

 Score =  149 bits (376),  Expect = 1e-33, Method: Compositional matrix adjust.
 Identities = 98/163 (61%), Positives = 124/163 (77%), Gaps = 1/163 (0%)

Query  1    VSFLVVVPEFLTSAAADVENIGSTLRAANAAAAASTTALAAAGADEVSAAVAALFARFGQ  60
            +SF+   PE L +AA +V NIG++L AANA AAASTT++ AAGADEVS A+A LF+ +  
Sbjct  1    MSFVTAAPEMLATAAQNVANIGTSLSAANATAAASTTSVLAAGADEVSQAIARLFSDYAT  60

Query  61   EYQAVSAQASAFHQQFVQTLNSASGSYAAAEATIASQLQTAQHDLLGAVNAPTETLLGRP  120
             YQ+++AQA+AFH  FVQTLN+A G+Y++AEA  AS     Q +LL  +NAP + L GRP
Sbjct  61   HYQSLNAQAAAFHHSFVQTLNAAGGAYSSAEAANASAQALEQ-NLLAVINAPAQALFGRP  119

Query  121  LIGDGAPGTATSPNGGAGGLLYGNGGNGYSATASGVGGGAGGS  163
            LIG+GA GTA SPNGG GG+LYGNGGNG+S T +GV GGA GS
Sbjct  120  LIGNGANGTAASPNGGDGGILYGNGGNGFSQTTAGVAGGASGS  162


>gi|183982126|ref|YP_001850417.1| PE-PGRS family protein [Mycobacterium marinum M]
 gi|183175452|gb|ACC40562.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=577

 Score =  149 bits (375),  Expect = 1e-33, Method: Compositional matrix adjust.
 Identities = 94/152 (62%), Positives = 117/152 (77%), Gaps = 0/152 (0%)

Query  1    VSFLVVVPEFLTSAAADVENIGSTLRAANAAAAASTTALAAAGADEVSAAVAALFARFGQ  60
            ++F+   PE +++AA DV NIG++L AANAA AA TT++ AAG DEVS A+A +    G 
Sbjct  1    MAFVFATPELVSAAAQDVANIGTSLGAANAAVAAPTTSVLAAGGDEVSHAIATMLRNHGA  60

Query  61   EYQAVSAQASAFHQQFVQTLNSASGSYAAAEATIASQLQTAQHDLLGAVNAPTETLLGRP  120
            +YQA+SAQ +  HQ+ VQ LNSASG+YA+AEA  AS LQT +  +L AVN PT+ L GRP
Sbjct  61   QYQALSAQGAQVHQRIVQLLNSASGAYASAEAANASPLQTLESTVLDAVNTPTQALFGRP  120

Query  121  LIGDGAPGTATSPNGGAGGLLYGNGGNGYSAT  152
            LIG+GA GTATSPNGGAGG+LYGNGGNGYS T
Sbjct  121  LIGNGANGTATSPNGGAGGILYGNGGNGYSFT  152


>gi|118617342|ref|YP_905674.1| PE-PGRS family protein [Mycobacterium ulcerans Agy99]
 gi|118569452|gb|ABL04203.1| PE-PGRS family protein [Mycobacterium ulcerans Agy99]
Length=482

 Score =  146 bits (368),  Expect = 1e-32, Method: Compositional matrix adjust.
 Identities = 91/150 (61%), Positives = 119/150 (80%), Gaps = 0/150 (0%)

Query  1    VSFLVVVPEFLTSAAADVENIGSTLRAANAAAAASTTALAAAGADEVSAAVAALFARFGQ  60
            ++F++  PE +++AA +V +IG++L AANAA AASTT++ +AGAD+VS A AAL +  G 
Sbjct  1    MAFVIAAPELVSAAAENVASIGTSLGAANAAVAASTTSVLSAGADDVSQAFAALLSSHGA  60

Query  61   EYQAVSAQASAFHQQFVQTLNSASGSYAAAEATIASQLQTAQHDLLGAVNAPTETLLGRP  120
            +YQA+SAQA+ FHQ  +Q LNSA G+YA AEA   S LQT + +++GA+N PT+ + GRP
Sbjct  61   QYQALSAQAAQFHQGLMQLLNSAGGAYAGAEAANVSPLQTLESNVVGALNTPTQAIFGRP  120

Query  121  LIGDGAPGTATSPNGGAGGLLYGNGGNGYS  150
            LIGDGA GTATSPNGGAGG LYGNGGNGYS
Sbjct  121  LIGDGANGTATSPNGGAGGFLYGNGGNGYS  150


>gi|183985067|ref|YP_001853358.1| PE-PGRS family protein [Mycobacterium marinum M]
 gi|183178393|gb|ACC43503.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=456

 Score =  139 bits (351),  Expect = 9e-31, Method: Compositional matrix adjust.
 Identities = 81/152 (54%), Positives = 105/152 (70%), Gaps = 0/152 (0%)

Query  3    FLVVVPEFLTSAAADVENIGSTLRAANAAAAASTTALAAAGADEVSAAVAALFARFGQEY  62
             +   PE + +AA D+  IGS +  AN AAAA TT + AAGADEVS  VA+LF+R+ Q Y
Sbjct  3    LVFATPEIIAAAATDLAQIGSAISGANTAAAAPTTEVLAAGADEVSTVVASLFSRYAQAY  62

Query  63   QAVSAQASAFHQQFVQTLNSASGSYAAAEATIASQLQTAQHDLLGAVNAPTETLLGRPLI  122
            Q + A  +A H QFVQ LN+ +  YA  E+  +S LQT Q D+LG +NAPT+ LLGR LI
Sbjct  63   QVLGADMAAIHDQFVQALNAGANWYAGVESANSSTLQTVQQDVLGLINAPTQALLGRGLI  122

Query  123  GDGAPGTATSPNGGAGGLLYGNGGNGYSATAS  154
            GDGA GTA+ P+G  GG LYG+GG+GY++  S
Sbjct  123  GDGAAGTASHPDGYDGGFLYGSGGSGYNSATS  154


>gi|289575300|ref|ZP_06455527.1| PE-PGRS family protein [Mycobacterium tuberculosis K85]
 gi|289539731|gb|EFD44309.1| PE-PGRS family protein [Mycobacterium tuberculosis K85]
Length=324

 Score =  139 bits (350),  Expect = 1e-30, Method: Compositional matrix adjust.
 Identities = 91/152 (60%), Positives = 116/152 (77%), Gaps = 1/152 (0%)

Query  1    VSFLVVVPEFLTSAAADVENIGSTLRAANAAAAASTTALAAAGADEVSAAVAALFARFGQ  60
            +SF+   PE L +AA +V NIG++L AANA AAASTT++ AAGADEVS A+A LF+ +  
Sbjct  11   MSFVTAAPEMLATAAQNVANIGTSLSAANATAAASTTSVLAAGADEVSQAIARLFSDYAT  70

Query  61   EYQAVSAQASAFHQQFVQTLNSASGSYAAAEATIASQLQTAQHDLLGAVNAPTETLLGRP  120
             YQ+++AQA+AFH  FVQTLN+A G+Y++AEA  AS     Q +LL  +NAP + L GRP
Sbjct  71   HYQSLNAQAAAFHHSFVQTLNAAGGAYSSAEAANASAQALEQ-NLLAVINAPAQALFGRP  129

Query  121  LIGDGAPGTATSPNGGAGGLLYGNGGNGYSAT  152
            LIG+GA GTA SPNGG GG+LYGNGGNG+S T
Sbjct  130  LIGNGANGTAASPNGGDGGILYGNGGNGFSQT  161


>gi|148662430|ref|YP_001283953.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra]
 gi|253798327|ref|YP_003031328.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 1435]
 gi|148506582|gb|ABQ74391.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra]
 gi|253319830|gb|ACT24433.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 1435]
 gi|328458097|gb|AEB03520.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 4207]
Length=553

 Score =  139 bits (350),  Expect = 2e-30, Method: Compositional matrix adjust.
 Identities = 91/152 (60%), Positives = 116/152 (77%), Gaps = 1/152 (0%)

Query  1    VSFLVVVPEFLTSAAADVENIGSTLRAANAAAAASTTALAAAGADEVSAAVAALFARFGQ  60
            +SF+   PE L +AA +V NIG++L AANA AAASTT++ AAGADEVS A+A LF+ +  
Sbjct  11   MSFVTAAPEMLATAAQNVANIGTSLSAANATAAASTTSVLAAGADEVSQAIARLFSDYAT  70

Query  61   EYQAVSAQASAFHQQFVQTLNSASGSYAAAEATIASQLQTAQHDLLGAVNAPTETLLGRP  120
             YQ+++AQA+AFH  FVQTLN+A G+Y++AEA  AS     Q +LL  +NAP + L GRP
Sbjct  71   HYQSLNAQAAAFHHSFVQTLNAAGGAYSSAEAANASAQALEQ-NLLAVINAPAQALFGRP  129

Query  121  LIGDGAPGTATSPNGGAGGLLYGNGGNGYSAT  152
            LIG+GA GTA SPNGG GG+LYGNGGNG+S T
Sbjct  130  LIGNGANGTAASPNGGDGGILYGNGGNGFSQT  161


>gi|289570762|ref|ZP_06450989.1| PE-PGRS family protein [Mycobacterium tuberculosis T17]
 gi|289544516|gb|EFD48164.1| PE-PGRS family protein [Mycobacterium tuberculosis T17]
Length=545

 Score =  139 bits (349),  Expect = 2e-30, Method: Compositional matrix adjust.
 Identities = 91/152 (60%), Positives = 116/152 (77%), Gaps = 1/152 (0%)

Query  1    VSFLVVVPEFLTSAAADVENIGSTLRAANAAAAASTTALAAAGADEVSAAVAALFARFGQ  60
            +SF+   PE L +AA +V NIG++L AANA AAASTT++ AAGADEVS A+A LF+ +  
Sbjct  1    MSFVTAAPEMLATAAQNVANIGTSLSAANATAAASTTSVLAAGADEVSQAIARLFSDYAT  60

Query  61   EYQAVSAQASAFHQQFVQTLNSASGSYAAAEATIASQLQTAQHDLLGAVNAPTETLLGRP  120
             YQ+++AQA+AFH  FVQTLN+A G+Y++AEA  AS     Q +LL  +NAP + L GRP
Sbjct  61   HYQSLNAQAAAFHHSFVQTLNAAGGAYSSAEAANASAQALEQ-NLLAVINAPAQALFGRP  119

Query  121  LIGDGAPGTATSPNGGAGGLLYGNGGNGYSAT  152
            LIG+GA GTA SPNGG GG+LYGNGGNG+S T
Sbjct  120  LIGNGANGTAASPNGGDGGILYGNGGNGFSQT  151


>gi|297635201|ref|ZP_06952981.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 4207]
Length=543

 Score =  139 bits (349),  Expect = 2e-30, Method: Compositional matrix adjust.
 Identities = 91/152 (60%), Positives = 116/152 (77%), Gaps = 1/152 (0%)

Query  1    VSFLVVVPEFLTSAAADVENIGSTLRAANAAAAASTTALAAAGADEVSAAVAALFARFGQ  60
            +SF+   PE L +AA +V NIG++L AANA AAASTT++ AAGADEVS A+A LF+ +  
Sbjct  1    MSFVTAAPEMLATAAQNVANIGTSLSAANATAAASTTSVLAAGADEVSQAIARLFSDYAT  60

Query  61   EYQAVSAQASAFHQQFVQTLNSASGSYAAAEATIASQLQTAQHDLLGAVNAPTETLLGRP  120
             YQ+++AQA+AFH  FVQTLN+A G+Y++AEA  AS     Q +LL  +NAP + L GRP
Sbjct  61   HYQSLNAQAAAFHHSFVQTLNAAGGAYSSAEAANASAQALEQ-NLLAVINAPAQALFGRP  119

Query  121  LIGDGAPGTATSPNGGAGGLLYGNGGNGYSAT  152
            LIG+GA GTA SPNGG GG+LYGNGGNG+S T
Sbjct  120  LIGNGANGTAASPNGGDGGILYGNGGNGFSQT  151


>gi|294994300|ref|ZP_06799991.1| PE-PGRS family protein [Mycobacterium tuberculosis 210]
Length=543

 Score =  139 bits (349),  Expect = 2e-30, Method: Compositional matrix adjust.
 Identities = 91/152 (60%), Positives = 116/152 (77%), Gaps = 1/152 (0%)

Query  1    VSFLVVVPEFLTSAAADVENIGSTLRAANAAAAASTTALAAAGADEVSAAVAALFARFGQ  60
            +SF+   PE L +AA +V NIG++L AANA AAASTT++ AAGADEVS A+A LF+ +  
Sbjct  1    MSFVTAAPEMLATAAQNVANIGTSLSAANATAAASTTSVLAAGADEVSQAIARLFSDYAT  60

Query  61   EYQAVSAQASAFHQQFVQTLNSASGSYAAAEATIASQLQTAQHDLLGAVNAPTETLLGRP  120
             YQ+++AQA+AFH  FVQTLN+A G+Y++AEA  AS     Q +LL  +NAP + L GRP
Sbjct  61   HYQSLNAQAAAFHHSFVQTLNAAGGAYSSAEAANASAQALEQ-NLLAVINAPAQALFGRP  119

Query  121  LIGDGAPGTATSPNGGAGGLLYGNGGNGYSAT  152
            LIG+GA GTA SPNGG GG+LYGNGGNG+S T
Sbjct  120  LIGNGANGTAASPNGGDGGILYGNGGNGFSQT  151


>gi|254232709|ref|ZP_04926036.1| PE-PGRS family protein [Mycobacterium tuberculosis C]
 gi|124601768|gb|EAY60778.1| PE-PGRS family protein [Mycobacterium tuberculosis C]
Length=286

 Score =  139 bits (349),  Expect = 2e-30, Method: Compositional matrix adjust.
 Identities = 91/152 (60%), Positives = 116/152 (77%), Gaps = 1/152 (0%)

Query  1    VSFLVVVPEFLTSAAADVENIGSTLRAANAAAAASTTALAAAGADEVSAAVAALFARFGQ  60
            +SF+   PE L +AA +V NIG++L AANA AAASTT++ AAGADEVS A+A LF+ +  
Sbjct  1    MSFVTAAPEMLATAAQNVANIGTSLSAANATAAASTTSVLAAGADEVSQAIARLFSDYAT  60

Query  61   EYQAVSAQASAFHQQFVQTLNSASGSYAAAEATIASQLQTAQHDLLGAVNAPTETLLGRP  120
             YQ+++AQA+AFH  FVQTLN+A G+Y++AEA  AS     Q +LL  +NAP + L GRP
Sbjct  61   HYQSLNAQAAAFHHSFVQTLNAAGGAYSSAEAANASAQALEQ-NLLAVINAPAQALFGRP  119

Query  121  LIGDGAPGTATSPNGGAGGLLYGNGGNGYSAT  152
            LIG+GA GTA SPNGG GG+LYGNGGNG+S T
Sbjct  120  LIGNGANGTAASPNGGDGGILYGNGGNGFSQT  151


>gi|289444130|ref|ZP_06433874.1| PE-PGRS family protein [Mycobacterium tuberculosis T46]
 gi|289417049|gb|EFD14289.1| PE-PGRS family protein [Mycobacterium tuberculosis T46]
Length=543

 Score =  138 bits (348),  Expect = 2e-30, Method: Compositional matrix adjust.
 Identities = 91/152 (60%), Positives = 116/152 (77%), Gaps = 1/152 (0%)

Query  1    VSFLVVVPEFLTSAAADVENIGSTLRAANAAAAASTTALAAAGADEVSAAVAALFARFGQ  60
            +SF+   PE L +AA +V NIG++L AANA AAASTT++ AAGADEVS A+A LF+ +  
Sbjct  1    MSFVTAAPEMLATAAQNVANIGTSLSAANATAAASTTSVLAAGADEVSQAIARLFSDYAT  60

Query  61   EYQAVSAQASAFHQQFVQTLNSASGSYAAAEATIASQLQTAQHDLLGAVNAPTETLLGRP  120
             YQ+++AQA+AFH  FVQTLN+A G+Y++AEA  AS     Q +LL  +NAP + L GRP
Sbjct  61   HYQSLNAQAAAFHHSFVQTLNAAGGAYSSAEAANASAQALEQ-NLLAVINAPAQALFGRP  119

Query  121  LIGDGAPGTATSPNGGAGGLLYGNGGNGYSAT  152
            LIG+GA GTA SPNGG GG+LYGNGGNG+S T
Sbjct  120  LIGNGANGTAASPNGGDGGILYGNGGNGFSQT  151


>gi|340627608|ref|YP_004746060.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
 gi|340005798|emb|CCC44964.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
Length=546

 Score =  138 bits (348),  Expect = 2e-30, Method: Compositional matrix adjust.
 Identities = 91/152 (60%), Positives = 116/152 (77%), Gaps = 1/152 (0%)

Query  1    VSFLVVVPEFLTSAAADVENIGSTLRAANAAAAASTTALAAAGADEVSAAVAALFARFGQ  60
            +SF+   PE L +AA +V NIG++L AANA AAASTT++ AAGADEVS A+A LF+ +  
Sbjct  1    MSFVTAAPEMLATAAQNVANIGTSLSAANATAAASTTSVLAAGADEVSQAIARLFSDYAT  60

Query  61   EYQAVSAQASAFHQQFVQTLNSASGSYAAAEATIASQLQTAQHDLLGAVNAPTETLLGRP  120
             YQ+++AQA+AFH  FVQTLN+A G+Y++AEA  AS     Q +LL  +NAP + L GRP
Sbjct  61   HYQSLNAQAAAFHHSFVQTLNAAGGAYSSAEAANASAQALEQ-NLLAVINAPAQALFGRP  119

Query  121  LIGDGAPGTATSPNGGAGGLLYGNGGNGYSAT  152
            LIG+GA GTA SPNGG GG+LYGNGGNG+S T
Sbjct  120  LIGNGANGTAASPNGGDGGILYGNGGNGFSQT  151


>gi|339632619|ref|YP_004724261.1| PE-PGRS family protein [Mycobacterium africanum GM041182]
 gi|339331975|emb|CCC27678.1| PE-PGRS family protein [Mycobacterium africanum GM041182]
Length=542

 Score =  138 bits (348),  Expect = 2e-30, Method: Compositional matrix adjust.
 Identities = 91/152 (60%), Positives = 116/152 (77%), Gaps = 1/152 (0%)

Query  1    VSFLVVVPEFLTSAAADVENIGSTLRAANAAAAASTTALAAAGADEVSAAVAALFARFGQ  60
            +SF+   PE L +AA +V NIG++L AANA AAASTT++ AAGADEVS A+A LF+ +  
Sbjct  1    MSFVTAAPEMLATAAQNVANIGTSLSAANATAAASTTSVLAAGADEVSQAIARLFSDYAT  60

Query  61   EYQAVSAQASAFHQQFVQTLNSASGSYAAAEATIASQLQTAQHDLLGAVNAPTETLLGRP  120
             YQ+++AQA+AFH  FVQTLN+A G+Y++AEA  AS     Q +LL  +NAP + L GRP
Sbjct  61   HYQSLNAQAAAFHHSFVQTLNAAGGAYSSAEAANASAQALEQ-NLLAVINAPAQALFGRP  119

Query  121  LIGDGAPGTATSPNGGAGGLLYGNGGNGYSAT  152
            LIG+GA GTA SPNGG GG+LYGNGGNG+S T
Sbjct  120  LIGNGANGTAASPNGGDGGILYGNGGNGFSQT  151


>gi|31793775|ref|NP_856268.1| PE-PGRS family protein [Mycobacterium bovis AF2122/97]
 gi|121638476|ref|YP_978700.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur 
1173P2]
 gi|224990970|ref|YP_002645657.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172]
 gi|31619369|emb|CAD94807.1| PE-PGRS FAMILY PROTEIN [Mycobacterium bovis AF2122/97]
 gi|121494124|emb|CAL72602.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur 
1173P2]
 gi|224774083|dbj|BAH26889.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172]
 gi|341602514|emb|CCC65190.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Moreau RDJ]
Length=546

 Score =  138 bits (348),  Expect = 2e-30, Method: Compositional matrix adjust.
 Identities = 91/152 (60%), Positives = 116/152 (77%), Gaps = 1/152 (0%)

Query  1    VSFLVVVPEFLTSAAADVENIGSTLRAANAAAAASTTALAAAGADEVSAAVAALFARFGQ  60
            +SF+   PE L +AA +V NIG++L AANA AAASTT++ AAGADEVS A+A LF+ +  
Sbjct  1    MSFVTAAPEMLATAAQNVANIGTSLSAANATAAASTTSVLAAGADEVSQAIARLFSDYAT  60

Query  61   EYQAVSAQASAFHQQFVQTLNSASGSYAAAEATIASQLQTAQHDLLGAVNAPTETLLGRP  120
             YQ+++AQA+AFH  FVQTLN+A G+Y++AEA  AS     Q +LL  +NAP + L GRP
Sbjct  61   HYQSLNAQAAAFHHSFVQTLNAAGGAYSSAEAANASAQALEQ-NLLAVINAPAQALFGRP  119

Query  121  LIGDGAPGTATSPNGGAGGLLYGNGGNGYSAT  152
            LIG+GA GTA SPNGG GG+LYGNGGNG+S T
Sbjct  120  LIGNGANGTAASPNGGDGGILYGNGGNGFSQT  151


>gi|57117002|ref|YP_177891.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Rv]
 gi|148823786|ref|YP_001288540.1| PE-PGRS family protein [Mycobacterium tuberculosis F11]
 gi|2496502|sp|Q50630.1|PG44_MYCTU RecName: Full=Uncharacterized PE-PGRS family protein PE_PGRS44
 gi|41353430|emb|CAE55501.1| PE-PGRS FAMILY PROTEIN [Mycobacterium tuberculosis H37Rv]
 gi|148722313|gb|ABR06938.1| PE-PGRS family protein [Mycobacterium tuberculosis F11]
 gi|344220418|gb|AEN01049.1| PE-PGRS family protein [Mycobacterium tuberculosis CTRI-2]
Length=543

 Score =  138 bits (348),  Expect = 2e-30, Method: Compositional matrix adjust.
 Identities = 91/152 (60%), Positives = 116/152 (77%), Gaps = 1/152 (0%)

Query  1    VSFLVVVPEFLTSAAADVENIGSTLRAANAAAAASTTALAAAGADEVSAAVAALFARFGQ  60
            +SF+   PE L +AA +V NIG++L AANA AAASTT++ AAGADEVS A+A LF+ +  
Sbjct  1    MSFVTAAPEMLATAAQNVANIGTSLSAANATAAASTTSVLAAGADEVSQAIARLFSDYAT  60

Query  61   EYQAVSAQASAFHQQFVQTLNSASGSYAAAEATIASQLQTAQHDLLGAVNAPTETLLGRP  120
             YQ+++AQA+AFH  FVQTLN+A G+Y++AEA  AS     Q +LL  +NAP + L GRP
Sbjct  61   HYQSLNAQAAAFHHSFVQTLNAAGGAYSSAEAANASAQALEQ-NLLAVINAPAQALFGRP  119

Query  121  LIGDGAPGTATSPNGGAGGLLYGNGGNGYSAT  152
            LIG+GA GTA SPNGG GG+LYGNGGNG+S T
Sbjct  120  LIGNGANGTAASPNGGDGGILYGNGGNGFSQT  151


>gi|297732193|ref|ZP_06961311.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN R506]
Length=399

 Score =  138 bits (347),  Expect = 3e-30, Method: Compositional matrix adjust.
 Identities = 91/152 (60%), Positives = 116/152 (77%), Gaps = 1/152 (0%)

Query  1    VSFLVVVPEFLTSAAADVENIGSTLRAANAAAAASTTALAAAGADEVSAAVAALFARFGQ  60
            +SF+   PE L +AA +V NIG++L AANA AAASTT++ AAGADEVS A+A LF+ +  
Sbjct  1    MSFVTAAPEMLATAAQNVANIGTSLSAANATAAASTTSVLAAGADEVSQAIARLFSDYAT  60

Query  61   EYQAVSAQASAFHQQFVQTLNSASGSYAAAEATIASQLQTAQHDLLGAVNAPTETLLGRP  120
             YQ+++AQA+AFH  FVQTLN+A G+Y++AEA  AS     Q +LL  +NAP + L GRP
Sbjct  61   HYQSLNAQAAAFHHSFVQTLNAAGGAYSSAEAANASAQALEQ-NLLAVINAPAQALFGRP  119

Query  121  LIGDGAPGTATSPNGGAGGLLYGNGGNGYSAT  152
            LIG+GA GTA SPNGG GG+LYGNGGNG+S T
Sbjct  120  LIGNGANGTAASPNGGDGGILYGNGGNGFSQT  151


>gi|289754709|ref|ZP_06514087.1| PE-PGRS family protein [Mycobacterium tuberculosis EAS054]
 gi|289695296|gb|EFD62725.1| PE-PGRS family protein [Mycobacterium tuberculosis EAS054]
Length=293

 Score =  138 bits (347),  Expect = 3e-30, Method: Compositional matrix adjust.
 Identities = 91/152 (60%), Positives = 116/152 (77%), Gaps = 1/152 (0%)

Query  1    VSFLVVVPEFLTSAAADVENIGSTLRAANAAAAASTTALAAAGADEVSAAVAALFARFGQ  60
            +SF+   PE L +AA +V NIG++L AANA AAASTT++ AAGADEVS A+A LF+ +  
Sbjct  1    MSFVTAAPEMLATAAQNVANIGTSLSAANATAAASTTSVLAAGADEVSQAIARLFSDYAT  60

Query  61   EYQAVSAQASAFHQQFVQTLNSASGSYAAAEATIASQLQTAQHDLLGAVNAPTETLLGRP  120
             YQ+++AQA+AFH  FVQTLN+A G+Y++AEA  AS     Q +LL  +NAP + L GRP
Sbjct  61   HYQSLNAQAAAFHHSFVQTLNAAGGAYSSAEAANASAQALEQ-NLLAVINAPAQALFGRP  119

Query  121  LIGDGAPGTATSPNGGAGGLLYGNGGNGYSAT  152
            LIG+GA GTA SPNGG GG+LYGNGGNG+S T
Sbjct  120  LIGNGANGTAASPNGGDGGILYGNGGNGFSQT  151


>gi|340626466|ref|YP_004744918.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
 gi|340004656|emb|CCC43800.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
Length=1006

 Score =  136 bits (342),  Expect = 1e-29, Method: Compositional matrix adjust.
 Identities = 71/122 (59%), Positives = 94/122 (78%), Gaps = 0/122 (0%)

Query  1    VSFLVVVPEFLTSAAADVENIGSTLRAANAAAAASTTALAAAGADEVSAAVAALFARFGQ  60
            +S ++V PE + +AA+DV  IGS   AAN+ AA STT++ AAGADEVSAA+A LF    +
Sbjct  1    MSLVIVTPELVAAAASDVARIGSGFGAANSTAAGSTTSVLAAGADEVSAAIATLFGSHAR  60

Query  61   EYQAVSAQASAFHQQFVQTLNSASGSYAAAEATIASQLQTAQHDLLGAVNAPTETLLGRP  120
            EYQA+S Q +AFH +FVQTL++A GSY +AEAT A+ L T +H++L A+NAPT+ LLGRP
Sbjct  61   EYQAISTQVAAFHDRFVQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP  120

Query  121  LI  122
            LI
Sbjct  121  LI  122


>gi|339294426|gb|AEJ46537.1| putative PE family protein [Mycobacterium tuberculosis CCDC5079]
Length=1330

 Score =  135 bits (341),  Expect = 1e-29, Method: Compositional matrix adjust.
 Identities = 70/122 (58%), Positives = 95/122 (78%), Gaps = 0/122 (0%)

Query  1    VSFLVVVPEFLTSAAADVENIGSTLRAANAAAAASTTALAAAGADEVSAAVAALFARFGQ  60
            +S ++V PE + +AA+DV  IGS++  AN+AAA STT++ AAGADEVSAA+A LF    +
Sbjct  2    MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR  61

Query  61   EYQAVSAQASAFHQQFVQTLNSASGSYAAAEATIASQLQTAQHDLLGAVNAPTETLLGRP  120
            EYQA+S Q +AFH +F QTL++A GSY +AEAT A+ L T +H++L A+NAPT+ LLGRP
Sbjct  62   EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP  121

Query  121  LI  122
            LI
Sbjct  122  LI  123


>gi|339294428|gb|AEJ46539.1| hypothetical protein CCDC5079_1349 [Mycobacterium tuberculosis 
CCDC5079]
Length=742

 Score =  135 bits (340),  Expect = 2e-29, Method: Compositional matrix adjust.
 Identities = 70/122 (58%), Positives = 95/122 (78%), Gaps = 0/122 (0%)

Query  1    VSFLVVVPEFLTSAAADVENIGSTLRAANAAAAASTTALAAAGADEVSAAVAALFARFGQ  60
            +S ++V PE + +AA+DV  IGS++  AN+AAA STT++ AAGADEVSAA+A LF    +
Sbjct  2    MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR  61

Query  61   EYQAVSAQASAFHQQFVQTLNSASGSYAAAEATIASQLQTAQHDLLGAVNAPTETLLGRP  120
            EYQA+S Q +AFH +F QTL++A GSY +AEAT A+ L T +H++L A+NAPT+ LLGRP
Sbjct  62   EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP  121

Query  121  LI  122
            LI
Sbjct  122  LI  123


>gi|339631519|ref|YP_004723161.1| PE-PGRS family protein [Mycobacterium africanum GM041182]
 gi|339330875|emb|CCC26546.1| PE-PGRS family protein [Mycobacterium africanum GM041182]
Length=805

 Score =  135 bits (340),  Expect = 2e-29, Method: Compositional matrix adjust.
 Identities = 70/122 (58%), Positives = 95/122 (78%), Gaps = 0/122 (0%)

Query  1    VSFLVVVPEFLTSAAADVENIGSTLRAANAAAAASTTALAAAGADEVSAAVAALFARFGQ  60
            +S ++V PE + +AA+DV  IGS++  AN+AAA STT++ AAGADEVSAA+A LF    +
Sbjct  1    MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR  60

Query  61   EYQAVSAQASAFHQQFVQTLNSASGSYAAAEATIASQLQTAQHDLLGAVNAPTETLLGRP  120
            EYQA+S Q +AFH +F QTL++A GSY +AEAT A+ L T +H++L A+NAPT+ LLGRP
Sbjct  61   EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP  120

Query  121  LI  122
            LI
Sbjct  121  LI  122


>gi|289442899|ref|ZP_06432643.1| PE domain-containing protein [Mycobacterium tuberculosis T46]
 gi|289415818|gb|EFD13058.1| PE domain-containing protein [Mycobacterium tuberculosis T46]
Length=527

 Score =  135 bits (340),  Expect = 2e-29, Method: Compositional matrix adjust.
 Identities = 70/122 (58%), Positives = 95/122 (78%), Gaps = 0/122 (0%)

Query  1    VSFLVVVPEFLTSAAADVENIGSTLRAANAAAAASTTALAAAGADEVSAAVAALFARFGQ  60
            +S ++V PE + +AA+DV  IGS++  AN+AAA STT++ AAGADEVSAA+A LF    +
Sbjct  2    MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR  61

Query  61   EYQAVSAQASAFHQQFVQTLNSASGSYAAAEATIASQLQTAQHDLLGAVNAPTETLLGRP  120
            EYQA+S Q +AFH +F QTL++A GSY +AEAT A+ L T +H++L A+NAPT+ LLGRP
Sbjct  62   EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP  121

Query  121  LI  122
            LI
Sbjct  122  LI  123


>gi|15840912|ref|NP_335949.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551]
 gi|13881115|gb|AAK45763.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551]
Length=738

 Score =  135 bits (340),  Expect = 2e-29, Method: Compositional matrix adjust.
 Identities = 70/122 (58%), Positives = 95/122 (78%), Gaps = 0/122 (0%)

Query  1    VSFLVVVPEFLTSAAADVENIGSTLRAANAAAAASTTALAAAGADEVSAAVAALFARFGQ  60
            +S ++V PE + +AA+DV  IGS++  AN+AAA STT++ AAGADEVSAA+A LF    +
Sbjct  2    MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR  61

Query  61   EYQAVSAQASAFHQQFVQTLNSASGSYAAAEATIASQLQTAQHDLLGAVNAPTETLLGRP  120
            EYQA+S Q +AFH +F QTL++A GSY +AEAT A+ L T +H++L A+NAPT+ LLGRP
Sbjct  62   EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP  121

Query  121  LI  122
            LI
Sbjct  122  LI  123


>gi|339298066|gb|AEJ50176.1| hypothetical protein CCDC5180_1339 [Mycobacterium tuberculosis 
CCDC5180]
Length=742

 Score =  135 bits (339),  Expect = 2e-29, Method: Compositional matrix adjust.
 Identities = 70/122 (58%), Positives = 95/122 (78%), Gaps = 0/122 (0%)

Query  1    VSFLVVVPEFLTSAAADVENIGSTLRAANAAAAASTTALAAAGADEVSAAVAALFARFGQ  60
            +S ++V PE + +AA+DV  IGS++  AN+AAA STT++ AAGADEVSAA+A LF    +
Sbjct  2    MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR  61

Query  61   EYQAVSAQASAFHQQFVQTLNSASGSYAAAEATIASQLQTAQHDLLGAVNAPTETLLGRP  120
            EYQA+S Q +AFH +F QTL++A GSY +AEAT A+ L T +H++L A+NAPT+ LLGRP
Sbjct  62   EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP  121

Query  121  LI  122
            LI
Sbjct  122  LI  123


>gi|148822671|ref|YP_001287425.1| PE-PGRS family protein [Mycobacterium tuberculosis F11]
 gi|148721198|gb|ABR05823.1| PE-PGRS family protein [Mycobacterium tuberculosis F11]
Length=737

 Score =  135 bits (339),  Expect = 2e-29, Method: Compositional matrix adjust.
 Identities = 70/122 (58%), Positives = 95/122 (78%), Gaps = 0/122 (0%)

Query  1    VSFLVVVPEFLTSAAADVENIGSTLRAANAAAAASTTALAAAGADEVSAAVAALFARFGQ  60
            +S ++V PE + +AA+DV  IGS++  AN+AAA STT++ AAGADEVSAA+A LF    +
Sbjct  1    MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR  60

Query  61   EYQAVSAQASAFHQQFVQTLNSASGSYAAAEATIASQLQTAQHDLLGAVNAPTETLLGRP  120
            EYQA+S Q +AFH +F QTL++A GSY +AEAT A+ L T +H++L A+NAPT+ LLGRP
Sbjct  61   EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP  120

Query  121  LI  122
            LI
Sbjct  121  LI  122



Lambda     K      H
   0.313    0.137    0.408 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 1243781828814


  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
    Posted date:  Sep 5, 2011  4:36 AM
  Number of letters in database: 5,219,829,388
  Number of sequences in database:  15,229,318



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40