BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv1985c Length=303 Score E Sequences producing significant alignments: (Bits) Value gi|15609122|ref|NP_216501.1| chromosome replication initiation i... 612 2e-173 gi|108797334|ref|YP_637531.1| chromosome replication initiation ... 449 2e-124 gi|126432956|ref|YP_001068647.1| chromosome replication initiati... 448 5e-124 gi|118472265|ref|YP_884958.1| chromosome replication initiation ... 412 3e-113 gi|120401400|ref|YP_951229.1| chromosome replication initiation ... 407 1e-111 gi|315442063|ref|YP_004074942.1| LysR family transcriptional reg... 387 1e-105 gi|145220966|ref|YP_001131644.1| chromosome replication initiati... 385 6e-105 gi|169631457|ref|YP_001705106.1| chromosome replication initiati... 303 2e-80 gi|336319974|ref|YP_004599942.1| LysR family transcriptional reg... 267 2e-69 gi|330465742|ref|YP_004403485.1| chromosome replication initiati... 266 3e-69 gi|284034776|ref|YP_003384707.1| LysR family transcriptional reg... 260 2e-67 gi|312198953|ref|YP_004019014.1| LysR family transcriptional reg... 258 8e-67 gi|257094768|ref|YP_003168409.1| LysR family transcriptional reg... 258 8e-67 gi|302549083|ref|ZP_07301425.1| chromosome replication initiatio... 254 1e-65 gi|332669555|ref|YP_004452563.1| LysR family transcriptional reg... 252 5e-65 gi|159038669|ref|YP_001537922.1| chromosome replication initiati... 247 2e-63 gi|254523159|ref|ZP_05135214.1| transcriptional regulator, LysR ... 246 2e-63 gi|344206581|ref|YP_004791722.1| LysR family transcriptional reg... 246 3e-63 gi|302556946|ref|ZP_07309288.1| LysR family transcriptional regu... 246 4e-63 gi|126348083|emb|CAJ89804.1| putative LysR-family transcriptiona... 246 4e-63 gi|190573410|ref|YP_001971255.1| chromosome replication initiati... 245 5e-63 gi|325919313|ref|ZP_08181351.1| transcriptional regulator, LysR ... 244 1e-62 gi|21225583|ref|NP_631362.1| chromosome replication initiation i... 240 2e-61 gi|194364953|ref|YP_002027563.1| chromosome replication initiati... 240 2e-61 gi|295836184|ref|ZP_06823117.1| LysR family transcriptional regu... 239 3e-61 gi|291441357|ref|ZP_06580747.1| chromosome replication initiatio... 239 3e-61 gi|325929350|ref|ZP_08190480.1| transcriptional regulator, LysR ... 239 5e-61 gi|260430997|ref|ZP_05784968.1| chromosome replication initiatio... 238 1e-60 gi|78048820|ref|YP_364995.1| chromosome replication initiation i... 238 1e-60 gi|220911049|ref|YP_002486358.1| chromosome replication initiati... 236 3e-60 gi|319949666|ref|ZP_08023700.1| chromosome replication initiatio... 236 4e-60 gi|344999903|ref|YP_004802757.1| LysR family transcriptional reg... 235 6e-60 gi|153010297|ref|YP_001371511.1| chromosome replication initiati... 233 3e-59 gi|188990590|ref|YP_001902600.1| chromosome replication initiati... 233 3e-59 gi|21232386|ref|NP_638303.1| chromosome replication initiation i... 233 4e-59 gi|229820142|ref|YP_002881668.1| chromosome replication initiati... 233 4e-59 gi|66767481|ref|YP_242243.1| chromosome replication initiation i... 232 5e-59 gi|341938053|gb|AEL08192.1| transcriptional regulator LysR famil... 232 5e-59 gi|21243861|ref|NP_643443.1| chromosome replication initiation i... 232 5e-59 gi|253688471|ref|YP_003017661.1| transcriptional regulator, ArgP... 232 6e-59 gi|294626849|ref|ZP_06705441.1| chromosome replication initiatio... 231 7e-59 gi|254524195|ref|ZP_05136250.1| chromosome replication initiatio... 231 1e-58 gi|187476705|ref|YP_784728.1| chromosome replication initiation ... 231 2e-58 gi|294665418|ref|ZP_06730706.1| chromosome replication initiatio... 230 2e-58 gi|190573262|ref|YP_001971107.1| chromosome replication initiati... 229 3e-58 gi|344206487|ref|YP_004791628.1| LysR family transcriptional reg... 229 3e-58 gi|226362810|ref|YP_002780588.1| chromosome replication initiati... 229 4e-58 gi|111020585|ref|YP_703557.1| chromosome replication initiation ... 229 4e-58 gi|194364863|ref|YP_002027473.1| chromosome replication initiati... 229 5e-58 gi|332285625|ref|YP_004417536.1| chromosome replication initiati... 229 5e-58 >gi|15609122|ref|NP_216501.1| chromosome replication initiation inhibitor protein [Mycobacterium tuberculosis H37Rv] gi|15841463|ref|NP_336500.1| chromosome replication initiation inhibitor protein [Mycobacterium tuberculosis CDC1551] gi|31793164|ref|NP_855657.1| chromosome replication initiation inhibitor protein [Mycobacterium bovis AF2122/97] 82 more sequence titles Length=303 Score = 612 bits (1578), Expect = 2e-173, Method: Compositional matrix adjust. Identities = 303/303 (100%), Positives = 303/303 (100%), Gaps = 0/303 (0%) Query 1 MVDPQLDGPQLAALAAVVELGSFDAAAERLHVTPSAVSQRIKSLEQQVGQVLVVREKPCR 60 MVDPQLDGPQLAALAAVVELGSFDAAAERLHVTPSAVSQRIKSLEQQVGQVLVVREKPCR Sbjct 1 MVDPQLDGPQLAALAAVVELGSFDAAAERLHVTPSAVSQRIKSLEQQVGQVLVVREKPCR 60 Query 61 ATTAGIPLLRLAAQTALLESEALAEMGGNASLKRTRITIAVNADSMATWFSAVFDGLGDV 120 ATTAGIPLLRLAAQTALLESEALAEMGGNASLKRTRITIAVNADSMATWFSAVFDGLGDV Sbjct 61 ATTAGIPLLRLAAQTALLESEALAEMGGNASLKRTRITIAVNADSMATWFSAVFDGLGDV 120 Query 121 LLDVRIEDQDHSARLLREGVAMGAVTTERNPVPGCRVHPLGEMRYLPVASRPFVQRHLSD 180 LLDVRIEDQDHSARLLREGVAMGAVTTERNPVPGCRVHPLGEMRYLPVASRPFVQRHLSD Sbjct 121 LLDVRIEDQDHSARLLREGVAMGAVTTERNPVPGCRVHPLGEMRYLPVASRPFVQRHLSD 180 Query 181 GFTAAAAAKAPSLAWNRDDGLQDMLVRKAFRRAITRPTHFVPTTEGFTAAARAGLGWGMF 240 GFTAAAAAKAPSLAWNRDDGLQDMLVRKAFRRAITRPTHFVPTTEGFTAAARAGLGWGMF Sbjct 181 GFTAAAAAKAPSLAWNRDDGLQDMLVRKAFRRAITRPTHFVPTTEGFTAAARAGLGWGMF 240 Query 241 PEKLAASPLADGSFVRVCDIHLDVPLYWQCWKLDSPIIARITDTVRAAASGLYRGQQRRR 300 PEKLAASPLADGSFVRVCDIHLDVPLYWQCWKLDSPIIARITDTVRAAASGLYRGQQRRR Sbjct 241 PEKLAASPLADGSFVRVCDIHLDVPLYWQCWKLDSPIIARITDTVRAAASGLYRGQQRRR 300 Query 301 RPG 303 RPG Sbjct 301 RPG 303 >gi|108797334|ref|YP_637531.1| chromosome replication initiation inhibitor protein [Mycobacterium sp. MCS] gi|119866419|ref|YP_936371.1| chromosome replication initiation inhibitor protein [Mycobacterium sp. KMS] gi|108767753|gb|ABG06475.1| transcriptional regulator, LysR family [Mycobacterium sp. MCS] gi|119692508|gb|ABL89581.1| transcriptional regulator, LysR family [Mycobacterium sp. KMS] Length=304 Score = 449 bits (1156), Expect = 2e-124, Method: Compositional matrix adjust. Identities = 219/290 (76%), Positives = 248/290 (86%), Gaps = 0/290 (0%) Query 5 QLDGPQLAALAAVVELGSFDAAAERLHVTPSAVSQRIKSLEQQVGQVLVVREKPCRATTA 64 +L QLAALAAV+E GSFDAAAE LHVTPSAVSQRIK+LEQ+VGQVLVVREKPCRAT + Sbjct 13 RLGADQLAALAAVIEFGSFDAAAEHLHVTPSAVSQRIKALEQRVGQVLVVREKPCRATAS 72 Query 65 GIPLLRLAAQTALLESEALAEMGGNASLKRTRITIAVNADSMATWFSAVFDGLGDVLLDV 124 GIPLLRLAAQTALLE+EAL E+GG + R+ +AVNADSMATWF+AV + +VL D+ Sbjct 73 GIPLLRLAAQTALLEAEALGELGGPGAALVPRVAVAVNADSMATWFTAVLGDVSEVLFDI 132 Query 125 RIEDQDHSARLLREGVAMGAVTTERNPVPGCRVHPLGEMRYLPVASRPFVQRHLSDGFTA 184 RIEDQDHSARLLREGV MGAVTTER+PVPGCRV LG MRYLPVAS +V+R+L DGFTA Sbjct 133 RIEDQDHSARLLREGVVMGAVTTERSPVPGCRVQSLGVMRYLPVASAGYVERYLPDGFTA 192 Query 185 AAAAKAPSLAWNRDDGLQDMLVRKAFRRAITRPTHFVPTTEGFTAAARAGLGWGMFPEKL 244 AAA APSLAWNRDD LQDML+R+AFRRAITRP H+VPT EGF AA RAGLGWGM+PE+L Sbjct 193 VAAAHAPSLAWNRDDALQDMLIRRAFRRAITRPVHYVPTAEGFGAAVRAGLGWGMYPEQL 252 Query 245 AASPLADGSFVRVCDIHLDVPLYWQCWKLDSPIIARITDTVRAAASGLYR 294 A LA GS VRV D+HLDVPLYWQCWKLDSP++AR+T VR+AA+GL R Sbjct 253 AVPELAGGSLVRVADVHLDVPLYWQCWKLDSPLVARLTGAVRSAAAGLAR 302 >gi|126432956|ref|YP_001068647.1| chromosome replication initiation inhibitor protein [Mycobacterium sp. JLS] gi|126232756|gb|ABN96156.1| transcriptional regulator, LysR family [Mycobacterium sp. JLS] Length=304 Score = 448 bits (1152), Expect = 5e-124, Method: Compositional matrix adjust. Identities = 218/290 (76%), Positives = 247/290 (86%), Gaps = 0/290 (0%) Query 5 QLDGPQLAALAAVVELGSFDAAAERLHVTPSAVSQRIKSLEQQVGQVLVVREKPCRATTA 64 +L QLAALAAV+E GSFDAAAE LHVTPSAVSQRIK+LEQ+VGQVLVVREKPCRAT + Sbjct 13 RLGADQLAALAAVIEFGSFDAAAEHLHVTPSAVSQRIKALEQRVGQVLVVREKPCRATAS 72 Query 65 GIPLLRLAAQTALLESEALAEMGGNASLKRTRITIAVNADSMATWFSAVFDGLGDVLLDV 124 GIPLLRLAAQTALLE+EAL E+GG + R+ +AVNADSMATWF+AV + +VL D+ Sbjct 73 GIPLLRLAAQTALLEAEALGELGGPGAALVPRVAVAVNADSMATWFTAVLGDVSEVLFDI 132 Query 125 RIEDQDHSARLLREGVAMGAVTTERNPVPGCRVHPLGEMRYLPVASRPFVQRHLSDGFTA 184 RIEDQDHSARLLREGV MGAVTTER+PVPGCRV LG MRYL VAS +V+R+L DGFTA Sbjct 133 RIEDQDHSARLLREGVVMGAVTTERSPVPGCRVQSLGVMRYLSVASAGYVERYLPDGFTA 192 Query 185 AAAAKAPSLAWNRDDGLQDMLVRKAFRRAITRPTHFVPTTEGFTAAARAGLGWGMFPEKL 244 AAA APSLAWNRDD LQDML+R+AFRRAITRP H+VPT EGF AA RAGLGWGM+PE+L Sbjct 193 VAAAHAPSLAWNRDDALQDMLIRRAFRRAITRPVHYVPTAEGFGAAVRAGLGWGMYPEQL 252 Query 245 AASPLADGSFVRVCDIHLDVPLYWQCWKLDSPIIARITDTVRAAASGLYR 294 A L GSFVRV D+HLDVPLYWQCWKLDSP++AR+T VR+AA+GL R Sbjct 253 AVPELVGGSFVRVADVHLDVPLYWQCWKLDSPLVARLTGAVRSAAAGLAR 302 >gi|118472265|ref|YP_884958.1| chromosome replication initiation inhibitor protein [Mycobacterium smegmatis str. MC2 155] gi|118173552|gb|ABK74448.1| chromosome replication initiation inhibitor protein [Mycobacterium smegmatis str. MC2 155] Length=292 Score = 412 bits (1059), Expect = 3e-113, Method: Compositional matrix adjust. Identities = 212/293 (73%), Positives = 239/293 (82%), Gaps = 7/293 (2%) Query 5 QLDGPQLAALAAVVELGSFDAAAERLHVTPSAVSQRIKSLEQQVGQVLVVREKPCRATTA 64 Q+DG QLAA AAV+ELGSFDAAA RLHVTPSAVSQRIK+LEQ+VGQVLVVREKPC AT A Sbjct 2 QIDGQQLAAFAAVIELGSFDAAAARLHVTPSAVSQRIKALEQRVGQVLVVREKPCTATPA 61 Query 65 GIPLLRLAAQTALLESEALAEMGGNASLKRTRITIAVNADSMATWFSAVFDGLGDVLLDV 124 G+PLLRLAAQTALLESEALAEMGG +S R R+ +AVNADSMA+WF+ VF L DVL D+ Sbjct 62 GVPLLRLAAQTALLESEALAEMGGGSS-HRPRMALAVNADSMASWFTGVFRRLPDVLFDI 120 Query 125 RIEDQDHSARLLREGVAMGAVTTERNPVPGCRVHPLGEMRYLPVASRPFVQRHLSDGFTA 184 RIEDQD SAR LREGV MGAVTTER PV GCRVHPLG MRY+PVAS ++ R+L DGF Sbjct 121 RIEDQDLSARFLREGVVMGAVTTERTPVSGCRVHPLGAMRYIPVASAEYMARYLPDGFNR 180 Query 185 AAAAKAPSLAWNRDDGLQDMLVRKAFRRAITRPTHFVPTTEGFTAAARAGLGWGMFPEKL 244 AAA APSLAWNRDD LQD LVRK FRR +TRP HF+PT EGF AA RAGLGWGM+PE Sbjct 181 EAAAAAPSLAWNRDDRLQDQLVRKVFRRDVTRPVHFIPTAEGFGAAVRAGLGWGMYPED- 239 Query 245 AASPLADGSFVRVCDIHLDVPLYWQCWKLDSPIIARITDTVRAAASGLYRGQQ 297 L D SFV + + HLDVPL+WQCWKLDSP++ ITD V AA++ L RG++ Sbjct 240 ----LVDASFVPITEHHLDVPLFWQCWKLDSPLVQAITDAVLAASARL-RGRR 287 >gi|120401400|ref|YP_951229.1| chromosome replication initiation inhibitor protein [Mycobacterium vanbaalenii PYR-1] gi|119954218|gb|ABM11223.1| transcriptional regulator, LysR family [Mycobacterium vanbaalenii PYR-1] Length=289 Score = 407 bits (1045), Expect = 1e-111, Method: Compositional matrix adjust. Identities = 210/295 (72%), Positives = 237/295 (81%), Gaps = 9/295 (3%) Query 1 MVDPQLDGPQLAALAAVVELGSFDAAAERLHVTPSAVSQRIKSLEQQVGQVLVVREKPCR 60 MVD QLD QLAAL+AVVE GSFDAAAERLHVTPSA+SQRIK+LEQ+VGQVLV+REKPC Sbjct 1 MVD-QLDTGQLAALSAVVEFGSFDAAAERLHVTPSAISQRIKALEQRVGQVLVLREKPCV 59 Query 61 ATTAGIPLLRLAAQTALLESEALAEM-GGNASLKRTRITIAVNADSMATWFSAVFDGLGD 119 AT AG+PLLRLAAQTALL++EALAEM GG+A L R I +AVNADSMATWF+ VF L Sbjct 60 ATPAGVPLLRLAAQTALLQAEALAEMRGGSAELPR--IAMAVNADSMATWFTEVFARLPH 117 Query 120 VLLDVRIEDQDHSARLLREGVAMGAVTTERNPVPGCRVHPLGEMRYLPVASRPFVQRHLS 179 VL D+RIEDQDHSA+LLREGV MGAVTTER PV GCRV PLG MRY+PVA+ +VQRHL Sbjct 118 VLFDIRIEDQDHSAQLLREGVVMGAVTTERAPVAGCRVQPLGVMRYVPVATEAYVQRHLP 177 Query 180 DGFTAAAAAKAPSLAWNRDDGLQDMLVRKAFRRAITRPTHFVPTTEGFTAAARAGLGWGM 239 DGFT AA +APSLAWNR D LQD LVRK FRR++ RP H+VPT GF AA AGLGWGM Sbjct 178 DGFTREAAERAPSLAWNRADALQDQLVRKVFRRSVARPVHYVPTAAGFGAAVHAGLGWGM 237 Query 240 FPEKLAASPLADGSFVRVCDIHLDVPLYWQCWKLDSPIIARITDTVRAAASGLYR 294 +P + L D SFV + D HLDVPLYWQCWKLDS + ++T V +AASGL R Sbjct 238 YPIQ-----LLDASFVPITDQHLDVPLYWQCWKLDSDTVRQVTAAVDSAASGLLR 287 >gi|315442063|ref|YP_004074942.1| LysR family transcriptional regulator [Mycobacterium sp. Spyr1] gi|315260366|gb|ADT97107.1| transcriptional regulator, LysR family [Mycobacterium sp. Spyr1] Length=289 Score = 387 bits (993), Expect = 1e-105, Method: Compositional matrix adjust. Identities = 207/291 (72%), Positives = 231/291 (80%), Gaps = 8/291 (2%) Query 5 QLDGPQLAALAAVVELGSFDAAAERLHVTPSAVSQRIKSLEQQVGQVLVVREKPCRATTA 64 LD LAAL+AVVE GSFDAAA LH+TPSAVSQRIK+LEQ+VGQVLV+REKPC AT A Sbjct 4 HLDTAHLAALSAVVEFGSFDAAAAHLHITPSAVSQRIKALEQRVGQVLVLREKPCVATPA 63 Query 65 GIPLLRLAAQTALLESEALAEM-GGNASLKRTRITIAVNADSMATWFSAVFDGLGDVLLD 123 G PLLRLAAQTALL++EALAE+ GG A L R I +AVNADSMATWF+ V L VL D Sbjct 64 GAPLLRLAAQTALLQAEALAELRGGTADLPR--IALAVNADSMATWFTEVLTRLPHVLFD 121 Query 124 VRIEDQDHSARLLREGVAMGAVTTERNPVPGCRVHPLGEMRYLPVASRPFVQRHLSDGFT 183 VRIEDQDHSARLLREGV MGAVTTER PV GCRVH LG MRY+PVASR +V RH DGFT Sbjct 122 VRIEDQDHSARLLREGVVMGAVTTERAPVAGCRVHALGVMRYVPVASRDYVARHFPDGFT 181 Query 184 AAAAAKAPSLAWNRDDGLQDMLVRKAFRRAITRPTHFVPTTEGFTAAARAGLGWGMFPEK 243 AA+KAPSLAWNRDD LQD LVRK FRR++ RPTH+VPT GF AA AGLGWGM+P Sbjct 182 REAASKAPSLAWNRDDALQDQLVRKVFRRSVQRPTHYVPTATGFGAAVHAGLGWGMYP-- 239 Query 244 LAASPLADGSFVRVCDIHLDVPLYWQCWKLDSPIIARITDTVRAAASGLYR 294 L DGSFV + + HLDVPLYWQCWKLDS ++A++T V AAA+GL R Sbjct 240 ---IALLDGSFVPITEQHLDVPLYWQCWKLDSAVVAQVTAAVDAAAAGLLR 287 >gi|145220966|ref|YP_001131644.1| chromosome replication initiation inhibitor protein [Mycobacterium gilvum PYR-GCK] gi|145213452|gb|ABP42856.1| transcriptional regulator, LysR family [Mycobacterium gilvum PYR-GCK] Length=289 Score = 385 bits (988), Expect = 6e-105, Method: Compositional matrix adjust. Identities = 206/291 (71%), Positives = 230/291 (80%), Gaps = 8/291 (2%) Query 5 QLDGPQLAALAAVVELGSFDAAAERLHVTPSAVSQRIKSLEQQVGQVLVVREKPCRATTA 64 LD LAAL+AVVE GSFDAA LH+TPSAVSQRIK+LEQ+VGQVLV+REKPC AT A Sbjct 4 HLDTAHLAALSAVVEFGSFDAAGAHLHITPSAVSQRIKALEQRVGQVLVLREKPCVATPA 63 Query 65 GIPLLRLAAQTALLESEALAEM-GGNASLKRTRITIAVNADSMATWFSAVFDGLGDVLLD 123 G PLLRLAAQTALL++EALAE+ GG A L R I +AVNADSMATWF+ V L VL D Sbjct 64 GAPLLRLAAQTALLQAEALAELRGGTADLPR--IALAVNADSMATWFTEVLTRLPHVLFD 121 Query 124 VRIEDQDHSARLLREGVAMGAVTTERNPVPGCRVHPLGEMRYLPVASRPFVQRHLSDGFT 183 VRIEDQDHSARLLREGV MGAVTTER PV GCRVH LG MRY+PVASR +V RH DGFT Sbjct 122 VRIEDQDHSARLLREGVVMGAVTTERAPVAGCRVHALGVMRYVPVASRDYVARHFPDGFT 181 Query 184 AAAAAKAPSLAWNRDDGLQDMLVRKAFRRAITRPTHFVPTTEGFTAAARAGLGWGMFPEK 243 AA+KAPSLAWNRDD LQD LVRK FRR++ RPTH+VPT GF AA AGLGWGM+P Sbjct 182 REAASKAPSLAWNRDDALQDQLVRKVFRRSVQRPTHYVPTATGFGAAVHAGLGWGMYP-- 239 Query 244 LAASPLADGSFVRVCDIHLDVPLYWQCWKLDSPIIARITDTVRAAASGLYR 294 L DGSFV + + HLDVPLYWQCWKLDS ++A++T V AAA+GL R Sbjct 240 ---IALLDGSFVPITEQHLDVPLYWQCWKLDSAVVAQVTAAVDAAAAGLLR 287 >gi|169631457|ref|YP_001705106.1| chromosome replication initiation inhibitor protein [Mycobacterium abscessus ATCC 19977] gi|169243424|emb|CAM64452.1| Putative transcriptional regulator, LysR family [Mycobacterium abscessus] Length=290 Score = 303 bits (777), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 167/295 (57%), Positives = 197/295 (67%), Gaps = 11/295 (3%) Query 6 LDGPQLAALAAVVELGSFDAAAERLHVTPSAVSQRIKSLEQQVGQVLVVREKPCRATTAG 65 LD QL A AAVV+ GSFDAAA RL +TPSAVSQR+K+LE+ VGQVLV REKPC AT AG Sbjct 3 LDSQQLVAFAAVVDEGSFDAAARRLMITPSAVSQRVKALERSVGQVLVRREKPCVATDAG 62 Query 66 IPLLRLAAQTALLESEALAEMGGNASLKRTRITIAVNADSMATWFSAVFDGLGD-VLLDV 124 L+RLAAQ LE EAL EMGG + R+ IAVNADS TW +V + D VL+D+ Sbjct 63 TSLMRLAAQIGTLEREALQEMGGGVPI---RVAIAVNADSFGTWMGSVVSQIPDGVLIDI 119 Query 125 RIEDQDHSARLLREGVAMGAVTTERNPVPGCRVHPLGEMRYLPVASRPFVQRHLSDGFTA 184 RIEDQDHSA LLR GV M AVTTE P+ GCR LG MRY +AS +V+RHL DG Sbjct 120 RIEDQDHSAELLRAGVVMAAVTTEPRPIAGCRSESLGAMRYFGMASPEYVERHLPDGLLD 179 Query 185 AAAAK---APSLAWNRDDGLQDMLVRKAFRRAITRPTHFVPTTEGFTAAARAGLGWGMFP 241 + K AP + W+R D LQD +RK FRR + H VPTT GFTAA RAGLGWGM P Sbjct 180 SGIDKVRQAPLIRWDRRDALQDQFLRKLFRRDVVVAGHCVPTTVGFTAALRAGLGWGMMP 239 Query 242 EKLAASPLADGSFVRVCDIHLDVPLYWQCWKLDSPIIARITDTVRAAASGLYRGQ 296 E+L L + + R +LDVPLYWQ WK +S ++ IT VR AA+ L R + Sbjct 240 EQLGREGLVELAPGR----YLDVPLYWQHWKFESSTLSAITSAVREAATVLRRSR 290 >gi|336319974|ref|YP_004599942.1| LysR family transcriptional regulator [Cellvibrio gilvus ATCC 13127] gi|336103555|gb|AEI11374.1| transcriptional regulator, LysR family [Cellvibrio gilvus ATCC 13127] Length=294 Score = 267 bits (682), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 151/287 (53%), Positives = 191/287 (67%), Gaps = 2/287 (0%) Query 5 QLDGPQLAALAAVVELGSFDAAAERLHVTPSAVSQRIKSLEQQVGQVLVVREKPCRATTA 64 D QL ALAAV++ G+FD AA RLHVTPSAVSQRIK+LEQ+VG+VLVVR +PCRAT Sbjct 2 NFDAEQLRALAAVLDEGTFDGAAARLHVTPSAVSQRIKALEQRVGRVLVVRARPCRATEP 61 Query 65 GIPLLRLAAQTALLESEALAEMGGNASLKRTRITIAVNADSMATWFSAVFDGL-GDVLLD 123 G L RLAAQ A+LE +A A +GG+ + TR+ +AVNADS+++WF A GL DVL+D Sbjct 62 GAVLARLAAQVAVLERDAGAALGGDGTAGPTRLAVAVNADSLSSWFPAALVGLPDDVLVD 121 Query 124 VRIEDQDHSARLLREGVAMGAVTTERNPVPGCRVHPLGEMRYLPVASRPFVQRHLSDGFT 183 +R EDQD +A LLR+G AVT + + V GCRV PLG MRY+ +AS R +DG T Sbjct 122 LRREDQDRTAELLRDGTVTAAVTADAHAVQGCRVRPLGAMRYVGLASPALRDRWFADGVT 181 Query 184 AAAAAKAPSLAWNRDDGLQDMLVRKAFRRAITRPTHFVPTTEGFTAAARAGLGWGMFPEK 243 + A +AP++A+NR D LQ + + P H+VP+ F RAGLGWGM E Sbjct 182 SDALDRAPAIAFNRADALQHRYAERLVGHQVAPPVHYVPSNTAFVELLRAGLGWGMASEA 241 Query 244 LAASPLADGSFVRVC-DIHLDVPLYWQCWKLDSPIIARITDTVRAAA 289 AA+ LADGS V + HLDVPLYWQ W L +P + +T V AAA Sbjct 242 AAAAGLADGSLVDLAPGRHLDVPLYWQHWALRTPTLDDLTSRVLAAA 288 >gi|330465742|ref|YP_004403485.1| chromosome replication initiation inhibitor protein [Verrucosispora maris AB-18-032] gi|328808713|gb|AEB42885.1| chromosome replication initiation inhibitor protein [Verrucosispora maris AB-18-032] Length=298 Score = 266 bits (680), Expect = 3e-69, Method: Compositional matrix adjust. Identities = 151/297 (51%), Positives = 192/297 (65%), Gaps = 10/297 (3%) Query 6 LDGPQLAALAAVVELGSFDAAAERLHVTPSAVSQRIKSLEQQVGQVLVVREKPCRATTAG 65 LD QL LAAVV GSF+AA LHVTPSAVSQRIK+LE+ VGQVLV R++PC AT AG Sbjct 4 LDSAQLRTLAAVVSEGSFEAAGRLLHVTPSAVSQRIKALEEAVGQVLVRRQRPCDATEAG 63 Query 66 IPLLRLAAQTALLESEALAE----MGGNASLKRTRITIAVNADSMATWFSAVFDGLG--- 118 PLLRLA Q ALLE EALA+ +GG+ RTR+ + VNADS+ATWF A L Sbjct 64 RPLLRLAGQLALLEREALADARGPLGGDPG--RTRVAVVVNADSLATWFPAALARLPAPP 121 Query 119 DVLLDVRIEDQDHSARLLREGVAMGAVTTERNPVPGCRVHPLGEMRYLPVASRPFVQRHL 178 ++ D+R +DQDHSA LLR G M AVT +R V GCRV PLG MRY +A+ ++R Sbjct 122 ELSFDIRQDDQDHSAELLRAGAVMAAVTAQREAVQGCRVRPLGAMRYRALAAPSALRRWF 181 Query 179 SDGFTAAAAAKAPSLAWNRDDGLQDMLVRKAFRRAITRPTHFVPTTEGFTAAARAGLGWG 238 +DG T +A A AP + ++R D +Q +R R + P H+VP+ F+AA R GLGWG Sbjct 182 ADGLTRSALAAAPVVLFDRRDRIQHRFLRTLTGRTVDPPVHYVPSVPAFSAAIRLGLGWG 241 Query 239 MFPEKLAASPLADGSFVRVCDIH-LDVPLYWQCWKLDSPIIARITDTVRAAASGLYR 294 M PE++AA L G V + +D+PLYWQ W+LDS ++ +T V A A+ R Sbjct 242 MVPEQIAADDLDSGRCVDLAPGRVVDIPLYWQHWRLDSAVLTALTTAVCAVAAETLR 298 >gi|284034776|ref|YP_003384707.1| LysR family transcriptional regulator [Kribbella flavida DSM 17836] gi|283814069|gb|ADB35908.1| transcriptional regulator, LysR family [Kribbella flavida DSM 17836] Length=298 Score = 260 bits (664), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 150/293 (52%), Positives = 191/293 (66%), Gaps = 7/293 (2%) Query 5 QLDGPQLAALAAVVELGSFDAAAERLHVTPSAVSQRIKSLEQQVGQVLVVREKPCRATTA 64 Q+D QL AAV++ GSFDAAA RL +TPSAVSQRIK+LE ++GQVL+ R KP R+T A Sbjct 6 QIDSAQLDTFAAVIDEGSFDAAARRLRITPSAVSQRIKALESRLGQVLIQRGKPARSTAA 65 Query 65 GIPLLRLAAQTALLESEALAEMGGNASLKRTRITIAVNADSMATWF-SAVFDGLGDVL-- 121 G LLRLA Q +LLE EA+A + G ++ R+ +AVNADS+ WF A+ D +++ Sbjct 66 GEALLRLARQVSLLEVEAIAAVKGQ--MEGLRLPVAVNADSLNGWFLPALLDVPRELVTA 123 Query 122 LDVRIEDQDHSARLLREGVAMGAVTTERNPVPGCRVHPLGEMRYLPVASRPFVQRHLSDG 181 D+R EDQDHSA LLR+G + AVT + PV GCRV PLG MRYL VA+ + +R L+ Sbjct 124 FDLRQEDQDHSAELLRDGTVLAAVTADPRPVQGCRVRPLGRMRYLSVATPEYAERWLAGR 183 Query 182 FTAAAAAKAPSLAWNRDDGLQDMLVRKAFRRAITRPTHFVPTTEGFTAAARAGLGWGMFP 241 A A A AP L +N D LQ L+RK RR + P H +P F A GLGWGM Sbjct 184 PLAEALADAPMLVFNTKDMLQHRLLRKVTRRRLDPPVHTIPAPGPFVRAIGLGLGWGMIE 243 Query 242 EKLAASPLADGSFVRVC-DIHLDVPLYWQCWKLDSPIIARITDTV-RAAASGL 292 E++ LA G V V ++DVPLYWQ WKLDSP++ +TD V RAAA+GL Sbjct 244 EEVVEPDLAAGRLVEVAPGNYVDVPLYWQYWKLDSPVLNALTDAVLRAAAAGL 296 >gi|312198953|ref|YP_004019014.1| LysR family transcriptional regulator [Frankia sp. EuI1c] gi|311230289|gb|ADP83144.1| transcriptional regulator, ArgP, LysR family [Frankia sp. EuI1c] Length=305 Score = 258 bits (659), Expect = 8e-67, Method: Compositional matrix adjust. Identities = 155/309 (51%), Positives = 189/309 (62%), Gaps = 12/309 (3%) Query 2 VDPQLDGPQLAALAAVVELGSFDAAAERLHVTPSAVSQRIKSLEQQVGQVLVVREKPCRA 61 +D +L QLA L A+VELGSFDAAA LH+TPSAVSQRI++LE GQVLV R PCR Sbjct 1 MDLELPPAQLATLVAIVELGSFDAAARHLHLTPSAVSQRIRALESAAGQVLVRRSLPCRP 60 Query 62 TTAGIPLLRLAAQTALLESEALAEMGGNASLKRTRITIAVNADSMATWFSAVFDGLG--- 118 TTAG LLRLA QT LL +EA+ +GG S R +++AVNADS+ TWF V + Sbjct 61 TTAGEALLRLARQTRLLHAEAVEALGGRPS-ARVELSVAVNADSLETWFRDVVAEVARWD 119 Query 119 DVLLDVRIEDQDHSARLLREGVAMGAVTTERNPVPGCRVHPLGEMRYLPVASRPFVQRHL 178 DV+L + +EDQ SA LLR G A+ AVT++ V GCR PLG +RY P A+ F R Sbjct 120 DVVLRLHVEDQAFSAGLLRGGEALAAVTSDPVVVQGCRCEPLGTLRYRPAATPEFAARWC 179 Query 179 SDGFTAAAA----AKAPSLAWNRDDGLQDMLVRKAFRRAITRPTHFVPTTEGFTAAARAG 234 +DG AA + P L +N DGLQ L+R+ A H VPTT GF A R G Sbjct 180 ADGPPDGAADYRWDRMPLLVFNEKDGLQHELLRERGVLAAAPAAHRVPTTAGFHEAVRLG 239 Query 235 LGWGMFPEKLAASPLADGSFVRVCDIHLDVPLYWQCWKLDSPIIARITDTVRAAASGLYR 294 LGWGM P+ LA G V + D H+DVPLYWQ W+LDSP++ R+T V AA R Sbjct 240 LGWGMLPDAQLDGDLATGRLVTLTDTHVDVPLYWQRWRLDSPLLDRLTAAVTTAAGRHLR 299 Query 295 GQQRRRRPG 303 G RPG Sbjct 300 GT----RPG 304 >gi|257094768|ref|YP_003168409.1| LysR family transcriptional regulator [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257047292|gb|ACV36480.1| transcriptional regulator, LysR family [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length=302 Score = 258 bits (659), Expect = 8e-67, Method: Compositional matrix adjust. Identities = 139/291 (48%), Positives = 180/291 (62%), Gaps = 6/291 (2%) Query 5 QLDGPQLAALAAVVELGSFDAAAERLHVTPSAVSQRIKSLEQQVGQVLVVREKPCRATTA 64 ++D QLAA AAV+ GSF+ AA +L VTPSAVSQRIK LE ++GQVL+ R PCRAT A Sbjct 2 RIDNAQLAAFAAVLGEGSFELAARKLSVTPSAVSQRIKLLEDRLGQVLIQRSTPCRATAA 61 Query 65 GIPLLRLAAQTALLESEALAEMG--GNASLKRTRITIAVNADSMATWFSAVFD---GLGD 119 G LLR A Q ALLESE L+E+G + RI I VNADS+ +WF+ VFD G+ Sbjct 62 GRRLLRHAEQVALLESEVLSELGVVEGSGQTNVRIPIVVNADSLDSWFAEVFDALPGVTS 121 Query 120 VLLDVRIEDQDHSARLLREGVAMGAVTTERNPVPGCRVHPLGEMRYLPVASRPFVQRHLS 179 + LD+R EDQDHS LLREG M V+ + GCRV LG MRYL VAS +V R+ + Sbjct 122 ITLDIRSEDQDHSVALLREGTVMAGVSASAEAIQGCRVEALGAMRYLAVASPAYVDRYFA 181 Query 180 DGFTAAAAAKAPSLAWNRDDGLQDMLVRKAFRRAITRPTHFVPTTEGFTAAARAGLGWGM 239 G +A AP L +N+ D LQ + V + + PTH P+T F AAR G WGM Sbjct 182 AGVSADTLNAAPVLMFNKKDALQRLFVARLTGTVLQAPTHCAPSTRSFLEAARRGAAWGM 241 Query 240 FPEKLAASPLADGSFVRVCDIH-LDVPLYWQCWKLDSPIIARITDTVRAAA 289 PE++ A+ L +G + + H LD+PLYW CW++ S + ++ V AA Sbjct 242 MPEQIVAAALRNGDLLEMVPDHWLDIPLYWHCWRIGSSALDVLSKLVCQAA 292 >gi|302549083|ref|ZP_07301425.1| chromosome replication initiation inhibitor protein [Streptomyces viridochromogenes DSM 40736] gi|302466701|gb|EFL29794.1| chromosome replication initiation inhibitor protein [Streptomyces viridochromogenes DSM 40736] Length=299 Score = 254 bits (649), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 148/300 (50%), Positives = 194/300 (65%), Gaps = 9/300 (3%) Query 1 MVDPQLDGPQLAALAAVVELGSFDAAAERLHVTPSAVSQRIKSLEQQVGQVLVVREKPCR 60 M D LD Q+ L AVV+ G+FDAAA LHVTPSA+SQR+K+LEQ+ G+VL++R KP R Sbjct 2 MTDLPLD--QVRTLLAVVDEGTFDAAAAALHVTPSAISQRVKALEQRTGRVLLLRTKPVR 59 Query 61 ATTAGIPLLRLAAQTALLESEALAEMGGNASLKRTRITIAVNADSMATWFSAVFDGLGDV 120 T +G L+RLA Q A LE +A AE+G + + + TR+++AVNADS+ATWF V + + Sbjct 60 PTESGEVLVRLARQVARLEQDAHAELGLSGTGEPTRVSVAVNADSLATWFLPVLTRVPED 119 Query 121 L---LDVRIEDQDHSARLLREGVAMGAVTTERNPVPGCRVHPLGEMRYLPVASRPFVQRH 177 L ++R ED+DH+A LLREGV M AVT+ +PVPGC V LG MRY+PVA+ F RH Sbjct 120 LRLCFELRREDEDHTAALLREGVVMAAVTSSPDPVPGCSVRSLGRMRYIPVAAPDFAARH 179 Query 178 LSDGFTAAAAAKAPSLAWNRDDGLQDMLVRKAF--RRAITRPTHFVPTTEGFTAAARAGL 235 L DG P +A++R D QD VR+ R + H+VPT+EGF A AGL Sbjct 180 L-DGPLERVLLDVPVVAFDRRDDFQDGFVRRLTRGRGGASALRHYVPTSEGFVEAVAAGL 238 Query 236 GWGMFPEKLAASPLADGSFVRVCDIH-LDVPLYWQCWKLDSPIIARITDTVRAAASGLYR 294 GWG+ PE A L G V + +DVPLYWQ WKLDSP +A++ +TV A A+ R Sbjct 239 GWGLVPEAQAEPLLRTGRLVGLAPGRTVDVPLYWQQWKLDSPALAQVAETVTATAAQALR 298 >gi|332669555|ref|YP_004452563.1| LysR family transcriptional regulator [Cellulomonas fimi ATCC 484] gi|332338593|gb|AEE45176.1| transcriptional regulator, LysR family [Cellulomonas fimi ATCC 484] Length=300 Score = 252 bits (643), Expect = 5e-65, Method: Compositional matrix adjust. Identities = 154/298 (52%), Positives = 186/298 (63%), Gaps = 9/298 (3%) Query 6 LDGPQLAALAAVVELGSFDAAAERLHVTPSAVSQRIKSLEQQVGQVLVVREKPCRATTAG 65 +D QL LAAVV GSFDAAA+ LH+TPSAVSQRIK+LEQQVG V+V R +PC T AG Sbjct 3 IDSEQLRTLAAVVAEGSFDAAAQALHLTPSAVSQRIKALEQQVGGVVVRRTRPCLPTPAG 62 Query 66 IPLLRLAAQTALLESEALAEMGGNAS-------LKRTRITIAVNADSMATWFSAVFDGLG 118 L+RLA Q LL +AL E+G +A L R RI +AVNADS++TWF A L Sbjct 63 EVLVRLAGQVDLLTRDALVELGADAGTDASPDVLGRRRIAVAVNADSLSTWFPAALADLP 122 Query 119 DVLLDV-RIEDQDHSARLLREGVAMGAVTTERNPVPGCRVHPLGEMRYLPVASRPFVQRH 177 LL R EDQD SA LLR+G AVT E+ V GCRV PLG MRY+ VA+ R Sbjct 123 ADLLLDLRREDQDLSATLLRDGTVAAAVTAEQRAVQGCRVRPLGAMRYVAVAAPHARSRW 182 Query 178 LSDGFTAAAAAKAPSLAWNRDDGLQDMLVRKAFRRAITRPTHFVPTTEGFTAAARAGLGW 237 G +AA+AP+LA+NR DGLQ VR+ A P H+ P F A +AGLGW Sbjct 183 FPAGLDTGSAARAPALAFNRADGLQHAFVRQVLGDAPPLPVHYAPEQGAFVALVQAGLGW 242 Query 238 GMFPEKLAASPLADGSFVRVCDIH-LDVPLYWQCWKLDSPIIARITDTVRAAASGLYR 294 GM PE+ AA PLADG+ V + LDVPL+WQ W L +P + +T V AAA L+R Sbjct 243 GMVPEQAAAGPLADGTLVELEPGRWLDVPLFWQHWSLRTPTLDDLTARVVAAARVLHR 300 >gi|159038669|ref|YP_001537922.1| chromosome replication initiation inhibitor protein [Salinispora arenicola CNS-205] gi|157917504|gb|ABV98931.1| transcriptional regulator, LysR family [Salinispora arenicola CNS-205] Length=298 Score = 247 bits (630), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 144/298 (49%), Positives = 183/298 (62%), Gaps = 10/298 (3%) Query 6 LDGPQLAALAAVVELGSFDAAAERLHVTPSAVSQRIKSLEQQVGQVLVVREKPCRATTAG 65 LD QL AAVV GSFDAAA LHVTPSAVSQR+K+LE+ VGQVLV R +PCR T AG Sbjct 2 LDTTQLRTFAAVVAEGSFDAAARLLHVTPSAVSQRVKALEEAVGQVLVRRHRPCRPTDAG 61 Query 66 IPLLRLAAQTALLESEALAE---MGGNASLKRTRITIAVNADSMATWF----SAVFDGLG 118 PLLRLA Q ALLE EAL+E R+R+ VNADS+ATWF + V + LG Sbjct 62 KPLLRLAGQFALLEREALSEAQQGTSGGGRGRSRLAAVVNADSLATWFPTALARVSNQLG 121 Query 119 DVLLDVRIEDQDHSARLLREGVAMGAVTTERNPVPGCRVHPLGEMRYLPVASRPFVQRHL 178 + D+R +D++H+ LLR+G M AVT R PV GCR LG MRY P+ + V R Sbjct 122 -LFFDIRQDDEEHTVELLRDGSVMAAVTALREPVQGCRAQRLGAMRYHPLGAPALVDRWF 180 Query 179 SDGF-TAAAAAKAPSLAWNRDDGLQDMLVRKAFRRAITRPTHFVPTTEGFTAAARAGLGW 237 DG TA A A P + ++R D Q +R R + P H+VP+ F A R GLGW Sbjct 181 PDGIATAEALAATPVIVFDRKDQTQHRFLRSVTGRDLEPPVHYVPSVPAFVEAIRQGLGW 240 Query 238 GMFPEKLAASPLADGSFVRVC-DIHLDVPLYWQCWKLDSPIIARITDTVRAAASGLYR 294 G+ PE++AA+ L G+ + + D +DVPLYWQ W+L+S + +T VRA A+ R Sbjct 241 GLVPEQIAAAHLTRGTCLDIIPDRQVDVPLYWQHWRLESSALNALTSAVRAVAAEALR 298 >gi|254523159|ref|ZP_05135214.1| transcriptional regulator, LysR family [Stenotrophomonas sp. SKA14] gi|219720750|gb|EED39275.1| transcriptional regulator, LysR family [Stenotrophomonas sp. SKA14] Length=297 Score = 246 bits (629), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 149/295 (51%), Positives = 188/295 (64%), Gaps = 12/295 (4%) Query 9 PQLAALAAVVELGSFDAAAERLHVTPSAVSQRIKSLEQQVGQVLVVREKPCRATTAGIPL 68 PQLAA AAV+E GSF+AAA RL ++PSA+SQRIK+LE ++GQVLVVR+ PCR T AG L Sbjct 6 PQLAAFAAVLEEGSFEAAARRLSISPSALSQRIKALEDRLGQVLVVRQAPCRPTAAGEAL 65 Query 69 LR----LAAQTALLESEALAEMGGNASLKRTRITIAVNADSMATWFSAVFDGLGD---VL 121 LR + A A +E L E G +A+ RT I +AVN DS+ TWF L L Sbjct 66 LRRVRPMQALEAEALAELLPERGSDAA--RTPIPLAVNDDSLDTWFVPAIAELHQRHGYL 123 Query 122 LDVRIEDQDHSARLLREGVAMGAVTTERNPVPGCRVHPLGEMRYLPVASRPFVQRHLSDG 181 D+R++DQDH+ +LLR+G +GAVT E PV GC VHPLG MRY +AS F +++ SDG Sbjct 124 FDLRMDDQDHTLQLLRDGSVLGAVTAESQPVKGCNVHPLGAMRYHAIASPGFARQYFSDG 183 Query 182 FTAAAAAKAPSLAWNRDDGLQDMLVRKAFRRAITRPTHFVPTTEGFTAAARAGLGWGMFP 241 AAA A+AP L +NR D LQ VR+ R + P H++P++ GF AA GLGWGM P Sbjct 184 MQAAALARAPMLVFNRKDELQWRFVRRLTRARLQPPLHYLPSSTGFVEAAACGLGWGMAP 243 Query 242 EKLAASPLADGSFVRVCDIH--LDVPLYWQCWKLDSPIIARITDTVRAAASGLYR 294 E L A P A V V + LDVPLYWQ + S + IT +R+AASG R Sbjct 244 EALVA-PAAHAGRVVVLEPRRWLDVPLYWQHAAVRSSTLQHITQALRSAASGTLR 297 >gi|344206581|ref|YP_004791722.1| LysR family transcriptional regulator ArgP [Burkholderia sp. JV3] gi|343777943|gb|AEM50496.1| transcriptional regulator, ArgP, LysR family [Burkholderia sp. JV3] Length=297 Score = 246 bits (628), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 147/294 (50%), Positives = 187/294 (64%), Gaps = 10/294 (3%) Query 9 PQLAALAAVVELGSFDAAAERLHVTPSAVSQRIKSLEQQVGQVLVVREKPCRATTAGIPL 68 PQLAA AAV+E GSF+AAA RL ++PSA+SQRIK+LE ++GQVLVVR+ PCR T AG L Sbjct 6 PQLAAFAAVLEEGSFEAAARRLSISPSALSQRIKALEDRLGQVLVVRQAPCRPTAAGEAL 65 Query 69 LR----LAAQTALLESEALAEMGGNASLKRTRITIAVNADSMATWFSAVFDGLGD---VL 121 LR + A A +E L E G +A+ RT I +AVN DS+ TWF L L Sbjct 66 LRRVRPMQALEAEALAELLPERGSDAA--RTPIPLAVNDDSLDTWFVPAIADLHQRHGYL 123 Query 122 LDVRIEDQDHSARLLREGVAMGAVTTERNPVPGCRVHPLGEMRYLPVASRPFVQRHLSDG 181 D+R++DQDH+ +LLR+G +GAVT E PV GC VHPLG MRY +AS F +++ SDG Sbjct 124 FDLRMDDQDHTLQLLRDGSVLGAVTAESQPVKGCNVHPLGAMRYHAIASPGFARQYFSDG 183 Query 182 FTAAAAAKAPSLAWNRDDGLQDMLVRKAFRRAITRPTHFVPTTEGFTAAARAGLGWGMFP 241 AAA A+AP+L +NR D LQ VR+ R + P H++P++ GF AA GLGWGM P Sbjct 184 MQAAALARAPTLVFNRKDELQWRFVRRLTRARLQPPLHYLPSSTGFVEAAACGLGWGMAP 243 Query 242 EKLAASPLADGSFVRVCDIH-LDVPLYWQCWKLDSPIIARITDTVRAAASGLYR 294 E L A + G V + LDVPLYWQ + S + IT +R AASG R Sbjct 244 ETLVAPAVRAGRVVVLEPRRWLDVPLYWQHAAVRSSTLQHITQALRTAASGTLR 297 >gi|302556946|ref|ZP_07309288.1| LysR family transcriptional regulator [Streptomyces griseoflavus Tu4000] gi|302474564|gb|EFL37657.1| LysR family transcriptional regulator [Streptomyces griseoflavus Tu4000] Length=299 Score = 246 bits (627), Expect = 4e-63, Method: Compositional matrix adjust. Identities = 149/301 (50%), Positives = 190/301 (64%), Gaps = 9/301 (2%) Query 1 MVDPQLDGPQLAALAAVVELGSFDAAAERLHVTPSAVSQRIKSLEQQVGQVLVVREKPCR 60 M D LD Q+ L AVV+ G+FDAAA LHVTPSAVSQR+K+LEQ+ G+VL++R KP Sbjct 2 MSDLPLD--QVRTLLAVVDEGTFDAAAAALHVTPSAVSQRVKALEQRTGRVLLLRTKPVL 59 Query 61 ATTAGIPLLRLAAQTALLESEALAEMGGNASLKRTRITIAVNADSMATWFSAVFDGL--- 117 T +G L+RLA Q A LE +A AE+G + + + TR+++AVNADS+ATWF L Sbjct 60 PTESGEVLVRLARQVARLERDAHAELGLSGAGEPTRVSVAVNADSLATWFLGALTRLPAA 119 Query 118 GDVLLDVRIEDQDHSARLLREGVAMGAVTTERNPVPGCRVHPLGEMRYLPVASRPFVQRH 177 + ++R ED+ H+A LLREG M AVT+ +PVPGC V LG MRYLPVA+ F RH Sbjct 120 SRLCFELRREDESHTAALLREGTVMAAVTSSPDPVPGCSVRHLGRMRYLPVAAPEFAARH 179 Query 178 LSDGFTAAAAAKAPSLAWNRDDGLQDMLVRK--AFRRAITRPTHFVPTTEGFTAAARAGL 235 L+ G A A +AP + ++R D QD VR+ R H+VPT+EGF A AGL Sbjct 180 LA-GPPAQALRRAPVVVFDRRDDFQDGFVRRLTGGRSGANELRHYVPTSEGFVEAVAAGL 238 Query 236 GWGMFPEKLAASPLADGSF-VRVCDIHLDVPLYWQCWKLDSPIIARITDTVRAAASGLYR 294 GWGM PE A L DG V D +DV LYWQ WKLDSP +A ++ V AA+ R Sbjct 239 GWGMVPEAQADPLLRDGRLTVFAPDREVDVSLYWQQWKLDSPALAAVSAAVTRAAAEALR 298 Query 295 G 295 G Sbjct 299 G 299 >gi|126348083|emb|CAJ89804.1| putative LysR-family transcriptional regulator [Streptomyces ambofaciens ATCC 23877] Length=302 Score = 246 bits (627), Expect = 4e-63, Method: Compositional matrix adjust. Identities = 135/273 (50%), Positives = 175/273 (65%), Gaps = 5/273 (1%) Query 10 QLAALAAVVELGSFDAAAERLHVTPSAVSQRIKSLEQQVGQVLVVREKPCRATTAGIPLL 69 Q+ L AVV+ G+FDAAA LHVTPSAVSQR+K+LEQ+ G+VL++R KP R T +G L+ Sbjct 14 QVRTLLAVVDEGTFDAAAAALHVTPSAVSQRVKALEQRTGRVLLLRTKPVRPTDSGTVLV 73 Query 70 RLAAQTALLESEALAEMGGNASLKRTRITIAVNADSMATWFSAVFDGL---GDVLLDVRI 126 RLA Q A LE +A AE+G + + + TR+++AVNADS+ATWF + + ++R Sbjct 74 RLARQVARLERDAYAELGLSGAGEPTRVSVAVNADSLATWFLGALTRMPRDPGICFELRR 133 Query 127 EDQDHSARLLREGVAMGAVTTERNPVPGCRVHPLGEMRYLPVASRPFVQRHLSDGFTAAA 186 ED+DH+A LLREGV M AVT+ +PVPGC V LG MRYLP A F R+L DG + Sbjct 134 EDEDHTATLLREGVVMAAVTSSADPVPGCTVRHLGRMRYLPCAEPAFAARYL-DGPLHPS 192 Query 187 AAKAPSLAWNRDDGLQDMLVRKAFRRAITRPTHFVPTTEGFTAAARAGLGWGMFPEKLAA 246 AP + ++R D QD R+ H+VPT+EGF A AGLGWGM PE A Sbjct 193 IVAAPVVVFDRRDDFQDGFARRLGHGGAGPARHYVPTSEGFVEAVAAGLGWGMVPEPQAE 252 Query 247 SPLADGSFVRVC-DIHLDVPLYWQCWKLDSPII 278 L G V D+ +D+PLYWQ WKLDSP + Sbjct 253 PLLRAGRLVDFAPDLAVDIPLYWQQWKLDSPAL 285 >gi|190573410|ref|YP_001971255.1| chromosome replication initiation inhibitor protein [Stenotrophomonas maltophilia K279a] gi|190011332|emb|CAQ44947.1| putative LysR family TRANSCRIPTIONAL REGULATORY PROTEIN [Stenotrophomonas maltophilia K279a] Length=298 Score = 245 bits (626), Expect = 5e-63, Method: Compositional matrix adjust. Identities = 142/293 (49%), Positives = 179/293 (62%), Gaps = 7/293 (2%) Query 9 PQLAALAAVVELGSFDAAAERLHVTPSAVSQRIKSLEQQVGQVLVVREKPCRATTAGIPL 68 PQLAA AAV+E GSF+AAA RL ++PSA+SQRIK+LE ++GQVLVVR+ PCR T AG L Sbjct 6 PQLAAFAAVLEEGSFEAAARRLSISPSALSQRIKALEDRLGQVLVVRQAPCRPTAAGEAL 65 Query 69 LRLA---AQTALLESEALAEMGGNASLKRTRITIAVNADSMATWFSAVFDGLGD---VLL 122 LR L G++ RT I +AVN DS+ TWF L L Sbjct 66 LRRVRPMQALEAEALAELLPERGSSDAARTPIPLAVNDDSLDTWFVPAIADLHQRHGYLF 125 Query 123 DVRIEDQDHSARLLREGVAMGAVTTERNPVPGCRVHPLGEMRYLPVASRPFVQRHLSDGF 182 D+R++DQDH+ RLLR+G +GAVT E PV GC VHPLG MRY +AS F +++ SDG Sbjct 126 DLRMDDQDHTLRLLRDGSVLGAVTAESQPVKGCNVHPLGAMRYQAIASPGFARQYFSDGM 185 Query 183 TAAAAAKAPSLAWNRDDGLQDMLVRKAFRRAITRPTHFVPTTEGFTAAARAGLGWGMFPE 242 A A A+AP L +NR D LQ VR+ R + P H++P++ GF AA GLGWG+ PE Sbjct 186 DATALARAPMLVFNRKDELQWRFVRRLTRARLQPPLHYLPSSTGFVEAAACGLGWGLAPE 245 Query 243 KLAASPLADGSFVRVCDIH-LDVPLYWQCWKLDSPIIARITDTVRAAASGLYR 294 LAA + G V + LDVPLYWQ + S + IT +R AASG R Sbjct 246 TLAAPAVRAGRVVVLEPRRWLDVPLYWQHAAVRSSTLQHITQALRTAASGTLR 298 >gi|325919313|ref|ZP_08181351.1| transcriptional regulator, LysR family [Xanthomonas gardneri ATCC 19865] gi|325550211|gb|EGD21027.1| transcriptional regulator, LysR family [Xanthomonas gardneri ATCC 19865] Length=301 Score = 244 bits (623), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 134/268 (50%), Positives = 169/268 (64%), Gaps = 6/268 (2%) Query 9 PQLAALAAVVELGSFDAAAERLHVTPSAVSQRIKSLEQQVGQVLVVREKPCRATTAGIPL 68 PQLAA AAV+E GSFDAAA RL VTPSA+SQRIK+LE ++GQVLV+R+ PCR T AG L Sbjct 6 PQLAAFAAVLEEGSFDAAAYRLSVTPSAISQRIKALEDRLGQVLVIRKAPCRPTPAGERL 65 Query 69 LRLAAQTALLESEALAEM--GGNASLKRTRITIAVNADSMATWFSAVFDGLGDV---LLD 123 LR +LE+EA+A+ G A+ I IAVN DS+ TWF A L L D Sbjct 66 LRRVRPMQVLEAEAMADFLPGDGAAGHPRSIAIAVNDDSLQTWFLAALASLHQTHGFLFD 125 Query 124 VRIEDQDHSARLLREGVAMGAVTTERNPVPGCRVHPLGEMRYLPVASRPFVQRHLSDGFT 183 V ++DQDH+ LLR G +GAVT+ER P+ GC V LG MRY +AS FV R+ + GF Sbjct 126 VHVDDQDHTLELLRAGTVLGAVTSERKPLQGCNVDALGVMRYHAIASAAFVARYSAQGFN 185 Query 184 AAAAAKAPSLAWNRDDGLQDMLVRKAFRRAITRPTHFVPTTEGFTAAARAGLGWGMFPEK 243 A A +AP L +NR D LQ VR+ R ++ P H++PT+ GF AA GLGW + P+ Sbjct 186 ATALTRAPMLVFNRKDTLQARFVRRITRAQVSPPVHYLPTSTGFVEAAARGLGWCLAPDS 245 Query 244 LAASPLADGSFVRVCDIH-LDVPLYWQC 270 + + D V + LDVPLYWQC Sbjct 246 MVVPAIRDKQVVIIDPTRWLDVPLYWQC 273 >gi|21225583|ref|NP_631362.1| chromosome replication initiation inhibitor protein [Streptomyces coelicolor A3(2)] gi|289767270|ref|ZP_06526648.1| chromosome replication initiation inhibitor protein [Streptomyces lividans TK24] gi|8347040|emb|CAB93745.1| putative LysR-family transcriptional regulator [Streptomyces coelicolor A3(2)] gi|289697469|gb|EFD64898.1| chromosome replication initiation inhibitor protein [Streptomyces lividans TK24] Length=300 Score = 240 bits (613), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 139/282 (50%), Positives = 175/282 (63%), Gaps = 7/282 (2%) Query 1 MVDPQLDGPQLAALAAVVELGSFDAAAERLHVTPSAVSQRIKSLEQQVGQVLVVREKPCR 60 + D LD Q+ L AVV+ G+FDAAA LHVTPSAVSQR+K+LEQ+ G+VL++R KP R Sbjct 5 LADLPLD--QVRTLLAVVDEGTFDAAAAALHVTPSAVSQRVKALEQRTGRVLLLRTKPVR 62 Query 61 ATTAGIPLLRLAAQTALLESEALAEMGGNASLKRTRITIAVNADSMATWFSAVFDGLGD- 119 AT +G L+RLA Q A LE +A AE+G + TR+T+AVNADS+ATWF + Sbjct 63 ATDSGAVLVRLARQVARLERDASAELGLRGEGEPTRVTVAVNADSLATWFLPALTRIPRE 122 Query 120 --VLLDVRIEDQDHSARLLREGVAMGAVTTERNPVPGCRVHPLGEMRYLPVASRPFVQRH 177 + ++R ED+ H+A LLREGV M AVT+ PVPGC V LG MRYLP A+ F RH Sbjct 123 PALCFELRREDEGHTATLLREGVVMAAVTSSPEPVPGCTVRTLGRMRYLPCAAPEFAARH 182 Query 178 LSDGFTAAAAAKAPSLAWNRDDGLQDMLVRKAFRRAITRPTHFVPTTEGFTAAARAGLGW 237 L D A AP + ++R D QD R+ H+VPT+EGF A AGLGW Sbjct 183 L-DAPLRETVAGAPVVVFDRRDDFQDSFARRLGHGGAGAARHYVPTSEGFVEAVAAGLGW 241 Query 238 GMFPEKLAASPLADGSFVRVC-DIHLDVPLYWQCWKLDSPII 278 GM P+ A L G V D+ +DV LYWQ WKLDSP + Sbjct 242 GMVPQPQAEPLLRTGRLVTFAPDLAVDVTLYWQQWKLDSPAL 283 >gi|194364953|ref|YP_002027563.1| chromosome replication initiation inhibitor protein [Stenotrophomonas maltophilia R551-3] gi|194347757|gb|ACF50880.1| transcriptional regulator, LysR family [Stenotrophomonas maltophilia R551-3] Length=297 Score = 240 bits (613), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 146/297 (50%), Positives = 185/297 (63%), Gaps = 10/297 (3%) Query 6 LDGPQLAALAAVVELGSFDAAAERLHVTPSAVSQRIKSLEQQVGQVLVVREKPCRATTAG 65 L PQLAA AAV+E GSF+AAA RL ++PSA+SQRIK+LE ++GQVLVVR+ PCR T AG Sbjct 3 LIHPQLAAFAAVLEEGSFEAAARRLSISPSALSQRIKALEDRLGQVLVVRQAPCRPTAAG 62 Query 66 IPLLR----LAAQTALLESEALAEMGGNASLKRTRITIAVNADSMATWFSAVFDGLGD-- 119 LLR + A A +E L E G +A+ RT I +AVN DS+ TW L Sbjct 63 EALLRRVRPMQALEAEALAELLPERGSDAA--RTPIPLAVNDDSLDTWLVPAIAELHQRH 120 Query 120 -VLLDVRIEDQDHSARLLREGVAMGAVTTERNPVPGCRVHPLGEMRYLPVASRPFVQRHL 178 L D+R++DQDH+ +LLR+G +GAVT E PV GC VHPLG MRY +AS F +++ Sbjct 121 GYLFDLRMDDQDHTLQLLRDGSVLGAVTAESQPVKGCNVHPLGAMRYHAIASPGFARQYF 180 Query 179 SDGFTAAAAAKAPSLAWNRDDGLQDMLVRKAFRRAITRPTHFVPTTEGFTAAARAGLGWG 238 SDG AAA A+AP L +NR D LQ VR+ R + P H++P++ GF AA GLGWG Sbjct 181 SDGMQAAALARAPMLVFNRKDELQWRFVRRLTRARLQPPLHYLPSSTGFVEAAACGLGWG 240 Query 239 MFPEKLAASPLADGSFVRVCDIH-LDVPLYWQCWKLDSPIIARITDTVRAAASGLYR 294 M PE L A + G V + LDVPLYWQ + S + IT +R AAS R Sbjct 241 MAPESLVAPAVRAGRVVVLEPRRWLDVPLYWQHAAVRSSTLQHITQALRTAASSTLR 297 >gi|295836184|ref|ZP_06823117.1| LysR family transcriptional regulator [Streptomyces sp. SPB74] gi|295825893|gb|EDY42219.2| LysR family transcriptional regulator [Streptomyces sp. SPB74] Length=286 Score = 239 bits (611), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 140/276 (51%), Positives = 174/276 (64%), Gaps = 6/276 (2%) Query 10 QLAALAAVVELGSFDAAAERLHVTPSAVSQRIKSLEQQVGQVLVVREKPCRATTAGIPLL 69 Q+ L AVV+ G+FDAAA LHVTPSAVSQRIK+LEQ+ G+VL+ R KP RAT +G ++ Sbjct 9 QVRTLLAVVDEGTFDAAAAVLHVTPSAVSQRIKTLEQRAGRVLLQRTKPVRATESGRVVV 68 Query 70 RLAAQTALLESEALAEMGGNASLKRTRITIAVNADSMATWFSAVFDGLGD---VLLDVRI 126 R A Q A LE +A E+G +A R+ IAVNADS+ATWF + V ++R Sbjct 69 RYARQLAALERDAWTELGISAEAGPARLPIAVNADSLATWFLPALTRVPQSPPVCFELRR 128 Query 127 EDQDHSARLLREGVAMGAVTTERNPVPGCRVHPLGEMRYLPVASRPFVQRHLSDGFTAAA 186 ED+ H+A LLREG M AVT+ PV GC V PLG +RYLPVAS FV RHL+DG A Sbjct 129 EDEAHTAALLREGQVMAAVTSSAEPVAGCTVRPLGRVRYLPVASPGFVARHLADGPLAER 188 Query 187 AAKAPSLAWNRDDGLQDMLVRKAFRRAITRPT--HFVPTTEGFTAAARAGLGWGMFPEKL 244 AP + ++R D LQD VR A H+VPT+EGF A AGLGWG+ PE+ Sbjct 189 LPDAPVIVFDRRDELQDRFVRSMIPGAPGAGPLRHYVPTSEGFCDAVCAGLGWGLVPEQQ 248 Query 245 AASPLADGSFVR-VCDIHLDVPLYWQCWKLDSPIIA 279 A PL G+ V +DVPLYWQ WKLD P ++ Sbjct 249 AEPPLRSGALAELVPGRTMDVPLYWQQWKLDVPSLS 284 >gi|291441357|ref|ZP_06580747.1| chromosome replication initiation inhibitor protein [Streptomyces ghanaensis ATCC 14672] gi|291344252|gb|EFE71208.1| chromosome replication initiation inhibitor protein [Streptomyces ghanaensis ATCC 14672] Length=299 Score = 239 bits (611), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 142/282 (51%), Positives = 179/282 (64%), Gaps = 9/282 (3%) Query 1 MVDPQLDGPQLAALAAVVELGSFDAAAERLHVTPSAVSQRIKSLEQQVGQVLVVREKPCR 60 M D LD Q+ L AVV+ G+FDAAA LHVTPSAVSQR+K+LEQ+ G+VL++R KP R Sbjct 2 MADLPLD--QVRTLLAVVDEGTFDAAAAALHVTPSAVSQRVKALEQRTGRVLLLRTKPVR 59 Query 61 ATTAGIPLLRLAAQTALLESEALAEMGGNASLKRTRITIAVNADSMATWFSAVFDGL--- 117 T +G L+RLA Q A LE +A AE+G + + + TR++IAVNADS+ATWF + Sbjct 60 PTESGEVLVRLARQVARLERDAYAELGVSGAGEPTRVSIAVNADSLATWFLGALTDVPPE 119 Query 118 GDVLLDVRIEDQDHSARLLREGVAMGAVTTERNPVPGCRVHPLGEMRYLPVASRPFVQRH 177 + ++R ED+ H+A LLREG M AVT+ +PVPGC V LG MRYLPVA F RH Sbjct 120 ARLCFELRREDEAHTAALLREGTVMAAVTSSPDPVPGCSVRHLGRMRYLPVAHPEFAARH 179 Query 178 LSDGFTAAAAAKAPSLAWNRDDGLQDMLVRKAFR-RAITRP-THFVPTTEGFTAAARAGL 235 L+ G +AP + ++R D QD VR+ R RA P H+VPT+EGF + AGL Sbjct 180 LA-GPLREVLPRAPVVVFDRRDDFQDGFVRRLTRGRAEAGPWRHYVPTSEGFVESVAAGL 238 Query 236 GWGMFPEKLAASPLADGSFVRVC-DIHLDVPLYWQCWKLDSP 276 GWGM PE A L G V D +D LYWQ WKLDSP Sbjct 239 GWGMVPEAQAGPLLGTGRLVVFAPDRAVDASLYWQQWKLDSP 280 >gi|325929350|ref|ZP_08190480.1| transcriptional regulator, LysR family [Xanthomonas perforans 91-118] gi|325540262|gb|EGD11874.1| transcriptional regulator, LysR family [Xanthomonas perforans 91-118] Length=300 Score = 239 bits (609), Expect = 5e-61, Method: Compositional matrix adjust. Identities = 142/294 (49%), Positives = 183/294 (63%), Gaps = 8/294 (2%) Query 9 PQLAALAAVVELGSFDAAAERLHVTPSAVSQRIKSLEQQVGQVLVVREKPCRATTAGIPL 68 PQLAA AAV++ GSFDAAA+RL +TPSA+SQRIK+LE ++GQVLV+R PCR T AG L Sbjct 6 PQLAAFAAVLDEGSFDAAAQRLALTPSAISQRIKALEDRLGQVLVMRTAPCRPTPAGERL 65 Query 69 LRLAAQTALLESEALAEM---GGNASLKRTRITIAVNADSMATWFSAVFDGLGD---VLL 122 LR +LE+EA+A+ G A RT + IAVN DS+ TWF L L Sbjct 66 LRRLKPMQVLEAEAIADFLPGDGIAGHPRT-LAIAVNDDSLQTWFLQALSSLHQAHGFLF 124 Query 123 DVRIEDQDHSARLLREGVAMGAVTTERNPVPGCRVHPLGEMRYLPVASRPFVQRHLSDGF 182 DV+++DQDH+ LLR G +GAVT+ER P+ GC V LG MRY +AS FV H DGF Sbjct 125 DVQMDDQDHTLELLRAGSVLGAVTSERAPLQGCNVQALGVMRYHAIASAAFVAAHFQDGF 184 Query 183 TAAAAAKAPSLAWNRDDGLQDMLVRKAFRRAITRPTHFVPTTEGFTAAARAGLGWGMFPE 242 TA A KAP L +NR D LQ VR+ R ++ PTH++PT+ GF AA GLGW + PE Sbjct 185 TADALGKAPMLVFNRKDTLQARFVRRVTRSRLSPPTHYLPTSTGFVEAAARGLGWCLAPE 244 Query 243 KLAASPLADGSFVRVCDIH-LDVPLYWQCWKLDSPIIARITDTVRAAASGLYRG 295 + + + V V LDVPLYWQ + S ++ ++ +R AA+ RG Sbjct 245 AMVLPAVRNKQVVIVDPTRWLDVPLYWQYAAVRSNVLQQLNQALREAAATSLRG 298 >gi|260430997|ref|ZP_05784968.1| chromosome replication initiation inhibitor protein [Silicibacter lacuscaerulensis ITI-1157] gi|260414825|gb|EEX08084.1| chromosome replication initiation inhibitor protein [Silicibacter lacuscaerulensis ITI-1157] Length=294 Score = 238 bits (606), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 135/291 (47%), Positives = 178/291 (62%), Gaps = 5/291 (1%) Query 1 MVDPQLDGPQLAALAAVVELGSFDAAAERLHVTPSAVSQRIKSLEQQVGQVLVVREKPCR 60 M+DP QLAALAA++ GSFDAAA L VTPSAVSQRIK+LE +VG LV R PC Sbjct 2 MLDPN----QLAALAAILRHGSFDAAATHLAVTPSAVSQRIKALEDRVGVALVRRGTPCT 57 Query 61 ATTAGIPLLRLAAQTALLESEALAEMGGNASLKRTRITIAVNADSMATWFSAVFDGLGDV 120 T AG+ L R A LLE++ E+ + ++ IAV ADS++TWF + + Sbjct 58 GTPAGLRLARHAEDVGLLEAQLRRELALDEGSSTAQVRIAVPADSLSTWFIDAMAAVDGL 117 Query 121 LLDVRIEDQDHSARLLREGVAMGAVTTERNPVPGCRVHPLGEMRYLPVASRPFVQRHLSD 180 L D+ I+DQDHSA LR G A++ VPGC PLG++RYLP AS FV + ++ Sbjct 118 LFDLVIDDQDHSADWLRRGEVSAAISVGGPVVPGCDATPLGKLRYLPTASPEFVAQWFAE 177 Query 181 GFTAAAAAKAPSLAWNRDDGLQDMLVRKAFRRAITRPTHFVPTTEGFTAAARAGLGWGMF 240 G TA A+AP L +N+ D LQ + + R I+ PTHF+P++ GF AA AGLGWGM Sbjct 178 GVTAQTLARAPCLTFNQKDLLQKAWIEQQTGRRISPPTHFLPSSHGFVEAAAAGLGWGMN 237 Query 241 PEKLAASPLADGSFVRVC-DIHLDVPLYWQCWKLDSPIIARITDTVRAAAS 290 PE LA + DGS + D LDVPL WQ ++ +P +A +T ++ AAS Sbjct 238 PELLARPAIDDGSLSEIVPDAPLDVPLTWQVGRILAPALAPLTSAIKTAAS 288 >gi|78048820|ref|YP_364995.1| chromosome replication initiation inhibitor protein [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78037250|emb|CAJ24995.1| transcriptional regulator, LysR family [Xanthomonas campestris pv. vesicatoria str. 85-10] Length=300 Score = 238 bits (606), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 141/294 (48%), Positives = 182/294 (62%), Gaps = 8/294 (2%) Query 9 PQLAALAAVVELGSFDAAAERLHVTPSAVSQRIKSLEQQVGQVLVVREKPCRATTAGIPL 68 PQLAA AAV++ GSFDAAA+RL +TPSA+SQRIK+LE ++GQVLV+R PCR T G L Sbjct 6 PQLAAFAAVLDEGSFDAAAQRLALTPSAISQRIKALEDRLGQVLVMRTAPCRPTPTGERL 65 Query 69 LRLAAQTALLESEALAEM---GGNASLKRTRITIAVNADSMATWFSAVFDGLGD---VLL 122 LR +LE+EA+A+ G A RT + IAVN DS+ TWF L L Sbjct 66 LRRLKPMQVLEAEAIADFLPGDGIAGHPRT-LAIAVNDDSLQTWFLQALSSLHQAHGFLF 124 Query 123 DVRIEDQDHSARLLREGVAMGAVTTERNPVPGCRVHPLGEMRYLPVASRPFVQRHLSDGF 182 DV+++DQDH+ LLR G +GAVT+ER P+ GC V LG MRY +AS FV H DGF Sbjct 125 DVQMDDQDHTLELLRAGSVLGAVTSERAPLQGCNVQALGVMRYHAIASAAFVAAHFQDGF 184 Query 183 TAAAAAKAPSLAWNRDDGLQDMLVRKAFRRAITRPTHFVPTTEGFTAAARAGLGWGMFPE 242 TA A KAP L +NR D LQ VR+ R ++ PTH++PT+ GF AA GLGW + PE Sbjct 185 TADALGKAPMLVFNRKDTLQARFVRRVTRSRLSPPTHYLPTSTGFVEAAARGLGWCLAPE 244 Query 243 KLAASPLADGSFVRVCDIH-LDVPLYWQCWKLDSPIIARITDTVRAAASGLYRG 295 + + + V V LDVPLYWQ + S ++ ++ +R AA+ RG Sbjct 245 AMVLPAVRNKQVVIVDPTRWLDVPLYWQYAAVRSNVLQQLNQALREAAATSLRG 298 >gi|220911049|ref|YP_002486358.1| chromosome replication initiation inhibitor protein [Arthrobacter chlorophenolicus A6] gi|219857927|gb|ACL38269.1| transcriptional regulator, ArgP, LysR family [Arthrobacter chlorophenolicus A6] Length=315 Score = 236 bits (603), Expect = 3e-60, Method: Compositional matrix adjust. Identities = 144/291 (50%), Positives = 183/291 (63%), Gaps = 12/291 (4%) Query 10 QLAALAAVVELGSFDAAAERLHVTPSAVSQRIKSLEQQVGQVLVVREKPCRATTAGIPLL 69 L AL AV++ G+F+AAA+ L VTPSAVSQRIK+LE GQVLV R PC T AG LL Sbjct 5 HLRALMAVIDEGTFEAAADLLRVTPSAVSQRIKALEASTGQVLVRRRVPCIPTDAGSVLL 64 Query 70 RLAAQTALLESEALAEMGGNASLKRTRITIAVNADSMATWFS---AVFDGLGDVLLDVRI 126 R+A Q +LE+EA + G A+ R + +A+NADS+ATWF AV D LD+ + Sbjct 65 RMARQVQVLEAEASTAL-GTATASRAVLPVAINADSLATWFVPVLAVAATWQDTTLDLHV 123 Query 127 EDQDHSARLLREGVAMGAVTTERNPVPGCRVHPLGEMRYLPVASRPFVQRHLSDGFTAAA 186 EDQ S++LLR+G MGAVT++ PV GCRV LG MRY+PVA+ QR + G T Sbjct 124 EDQGFSSQLLRQGDVMGAVTSDPVPVSGCRVELLGHMRYIPVAAAALRQR-FAKGNT-VD 181 Query 187 AAKAPSLAWNRDDGLQDMLVRKAFRRAITR--PTHFVPTTEGFTAAARAGLGWGMFPEKL 244 A+ P L +N D LQ L+ R + + PTH VP++EGF AA +AGLGWGM PE Sbjct 182 WARMPVLKFNAKDNLQRGLLAA---RGVGQVPPTHTVPSSEGFLAAIKAGLGWGMLPELQ 238 Query 245 AASPLADGSFVRVC-DIHLDVPLYWQCWKLDSPIIARITDTVRAAASGLYR 294 + LADGS V + + H DVPLYWQ W LDS + R+ + VR A G R Sbjct 239 LGNELADGSLVLLGKNAHEDVPLYWQSWSLDSERLRRMGEAVRDAGLGKLR 289 >gi|319949666|ref|ZP_08023700.1| chromosome replication initiation inhibitor protein [Dietzia cinnamea P4] gi|319436657|gb|EFV91743.1| chromosome replication initiation inhibitor protein [Dietzia cinnamea P4] Length=298 Score = 236 bits (602), Expect = 4e-60, Method: Compositional matrix adjust. Identities = 140/296 (48%), Positives = 180/296 (61%), Gaps = 13/296 (4%) Query 1 MVDPQLDGPQLAALAAVVELGSFDAAAERLHVTPSAVSQRIKSLEQQVGQVLVVREKPCR 60 M QLD QL L AVV+LGSF+AAA LH+T SAVSQRI++LE+ G++LV RE+P Sbjct 1 MTALQLD--QLRTLVAVVDLGSFEAAAAHLHITQSAVSQRIRALEESAGRILVRRERPIT 58 Query 61 ATTAGIPLLRLAAQTALLESEALAEMGGNASLKR-TRITIAVNADSMATWF----SAVFD 115 AT +G +LR A Q LE E+ S + + +A N+DS++TWF + V D Sbjct 59 ATESGETVLRTARQMLHLEESLAGELDDLGSGQNPVVLAVACNSDSLSTWFLDAMTEVHD 118 Query 116 GLGDVLLDVRIEDQDHSARLLREGVAMGAVTTERNPVPGCRVHPLGEMRYLPVASRPFVQ 175 G G V+ D+R ED+ S+ LLR G M AVT++ PV GCR PLG MRYL AS FV Sbjct 119 G-GRVVFDIRREDESLSSELLRRGEVMAAVTSQSRPVQGCRSLPLGSMRYLACASPGFVA 177 Query 176 RHLSDGFTAAAAAKAPSLAWNRDDGLQDMLVRKAFRRAITRPTHFVPTTEGFTAAARAGL 235 RHL +G T AA +AP + ++R DG Q+ R+ RR T P HF+P++ A AGL Sbjct 178 RHLREGTTTAALGRAPIVDFDRSDGHQNHHYRRLARREPTGPRHFIPSSHDHVRAIVAGL 237 Query 236 GWGMFPEKLAASPLADGSFVRVC-DIHLDVPLYWQCWKLDSP----IIARITDTVR 286 GWG+ PE+LA L G V V D LDVPL+WQ WKL SP + A + DT R Sbjct 238 GWGLIPEQLATPWLVSGEIVEVSPDRPLDVPLFWQHWKLQSPDLDALTAAVLDTAR 293 >gi|344999903|ref|YP_004802757.1| LysR family transcriptional regulator [Streptomyces sp. SirexAA-E] gi|344315529|gb|AEN10217.1| transcriptional regulator, LysR family [Streptomyces sp. SirexAA-E] Length=301 Score = 235 bits (600), Expect = 6e-60, Method: Compositional matrix adjust. Identities = 142/292 (49%), Positives = 177/292 (61%), Gaps = 6/292 (2%) Query 5 QLDGPQLAALAAVVELGSFDAAAERLHVTPSAVSQRIKSLEQQVGQVLVVREKPCRATTA 64 +L Q+ L AVV+ G+FDAAA LHVTPSAVSQR+K+LEQ+ G+VL++R KP R T + Sbjct 3 ELPSDQVRTLLAVVDEGTFDAAAAALHVTPSAVSQRVKALEQRTGRVLLMRTKPVRPTES 62 Query 65 GIPLLRLAAQTALLESEALAEMGGNASLKRTRITIAVNADSMATWFSAVFDGLGD---VL 121 G ++RLA Q A LE EA E+G L R+ IAVNADS+ATWF + V Sbjct 63 GQVVVRLARQLAALEREAHMELGIADGLGPARLPIAVNADSLATWFLTALTRVPQDVPVC 122 Query 122 LDVRIEDQDHSARLLREGVAMGAVTTERNPVPGCRVHPLGEMRYLPVASRPFVQRHLSDG 181 ++ ED+ H+A LLREG AVT+ PV GC V PLG RYLPVA+ F +R L G Sbjct 123 FELHREDEAHTAALLREGQVTAAVTSSAEPVAGCTVRPLGLARYLPVANPWFAERRLRTG 182 Query 182 FTAAAAAKAPSLAWNRDDGLQDMLVRKAFRRA--ITRPTHFVPTTEGFTAAARAGLGWGM 239 AP + ++R D LQD VR A R H VPT+EGF A AGLGWGM Sbjct 183 PLERCLPDAPVIVFDRRDELQDRFVRSLAPGAPGAGRIRHHVPTSEGFCEAVAAGLGWGM 242 Query 240 FPEKLAASPLADGSFVRVC-DIHLDVPLYWQCWKLDSPIIARITDTVRAAAS 290 PE+ A L G+ + LDVPLYWQ WKLD P +A +T+TV AAA+ Sbjct 243 VPEQQAVPLLRSGTLTELAPGRRLDVPLYWQQWKLDVPALAVVTETVVAAAA 294 >gi|153010297|ref|YP_001371511.1| chromosome replication initiation inhibitor protein [Ochrobactrum anthropi ATCC 49188] gi|151562185|gb|ABS15682.1| transcriptional regulator, LysR family [Ochrobactrum anthropi ATCC 49188] Length=303 Score = 233 bits (594), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 127/292 (44%), Positives = 175/292 (60%), Gaps = 8/292 (2%) Query 6 LDGPQLAALAAVVELGSFDAAAERLHVTPSAVSQRIKSLEQQVGQVLVVREKPCRATTAG 65 +D L A+A VV+ GSF+ AA L+VTPSA+SQR+K LE+++G VL+ R PC AT G Sbjct 2 IDYSALRAVAMVVQTGSFEKAARALNVTPSAISQRVKHLEERLGAVLIERGSPCTATEKG 61 Query 66 IPLLRLAAQTALLESEALAEM----GGNASLKRTRITIAVNADSMATWFSAV---FDGLG 118 L R Q +LE E LAE+ G + +R + IA NADS+ TWF F Sbjct 62 DWLCRHIEQVGMLERELLAELPGLSGSENTAQRVTLHIATNADSLGTWFLKAISHFSTTA 121 Query 119 DVLLDVRIEDQDHSARLLREGVAMGAVTTERNPVPGCRVHPLGEMRYLPVASRPFVQRHL 178 + L ++ ++DQDH+A L+ G + AVT+ PV GCR+ PLG ++Y AS F+ RH Sbjct 122 EYLFNIAVDDQDHTAEWLQRGRVVAAVTSLSKPVQGCRLTPLGILQYRATASPEFIARHF 181 Query 179 SDGFTAAAAAKAPSLAWNRDDGLQDMLVRKAFRRAITRPTHFVPTTEGFTAAARAGLGWG 238 DG T A AKAP+L +N+ D LQD VR A R I PTH++P+T+ F A+ +G+GWG Sbjct 182 PDGITHDAIAKAPALTFNQKDRLQDQWVRTALRTDIACPTHWLPSTQAFVEASLSGMGWG 241 Query 239 MFPEKLAASPLADGSFVRVC-DIHLDVPLYWQCWKLDSPIIARITDTVRAAA 289 M P +L L G V + D LD+PL+WQ +L + +A +T TV A Sbjct 242 MNPVQLVGDHLQSGKLVELIPDTPLDIPLFWQVNRLAADRLASLTQTVLTTA 293 >gi|188990590|ref|YP_001902600.1| chromosome replication initiation inhibitor protein [Xanthomonas campestris pv. campestris str. B100] gi|167732350|emb|CAP50542.1| Transcriptional regulator, LysR family [Xanthomonas campestris pv. campestris] Length=305 Score = 233 bits (593), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 138/304 (46%), Positives = 187/304 (62%), Gaps = 15/304 (4%) Query 5 QLDGPQLAALAAVVELGSFDAAAERLHVTPSAVSQRIKSLEQQVGQVLVVREKPCRATTA 64 +L PQLAA AAV++ GSF+ AA RL VT SA+SQRIK+LE ++GQVLV+R PCRAT A Sbjct 2 ELLHPQLAAFAAVLDEGSFELAARRLSVTSSAISQRIKALEDRLGQVLVLRTAPCRATPA 61 Query 65 GIPLLRLAAQTALLESEALAEMGGNASLKRT--RITIAVNADSMATWFSAVFDGLGDV-- 120 G LLR +L++EA+A+ +A + T ++IAVN DS+ TW V L D+ Sbjct 62 GQRLLRRLRPMQVLQAEAMADFLPDAGVGGTPRTLSIAVNDDSLQTW---VLSALADLHQ 118 Query 121 ----LLDVRIEDQDHSARLLREGVAMGAVTTERNPVPGCRVHPLGEMRYLPVASRPFVQR 176 L DV ++DQDH+ LLR G +GAVT ER P+ GC V PLG MRY +AS V R Sbjct 119 AHGLLFDVHVDDQDHTLELLRAGTVLGAVTAERRPLQGCNVQPLGTMRYHAIASPDVVAR 178 Query 177 HLSDGFTAAAAAKAPSLAWNRDDGLQDMLVRKAFRRAITRPTHFVPTTEGFTAAARAGLG 236 + S G AA ++AP + +NR D LQ R+ R ++ P H++PT+ GF AA GLG Sbjct 179 YFSSGLDAAGLSRAPMMVFNRKDALQARFARRITRMQLSPPIHYLPTSTGFVDAAARGLG 238 Query 237 WGMFPEKLAASPLADGSFVRVCDIH--LDVPLYWQCWKLDSPIIARITDTVR-AAASGLY 293 W + PE + P + + + D LDVPLYWQ + S + R+ D++R AAA+ L Sbjct 239 WCLAPEAMVL-PAVERKTLLIIDPTRWLDVPLYWQHAAVRSTTLQRLGDSLRTAAAASLR 297 Query 294 RGQQ 297 G+Q Sbjct 298 VGKQ 301 >gi|21232386|ref|NP_638303.1| chromosome replication initiation inhibitor protein [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|21114163|gb|AAM42227.1| transcriptional regulator lysR family [Xanthomonas campestris pv. campestris str. ATCC 33913] Length=305 Score = 233 bits (593), Expect = 4e-59, Method: Compositional matrix adjust. Identities = 136/301 (46%), Positives = 186/301 (62%), Gaps = 9/301 (2%) Query 5 QLDGPQLAALAAVVELGSFDAAAERLHVTPSAVSQRIKSLEQQVGQVLVVREKPCRATTA 64 +L PQLAA AAV++ GSF+ AA RL VT SA+SQRIK+LE ++GQVLV+R PCRAT A Sbjct 2 ELLHPQLAAFAAVLDEGSFELAARRLSVTSSAISQRIKALEDRLGQVLVLRTAPCRATPA 61 Query 65 GIPLLRLAAQTALLESEALAEMGGNASLKRT--RITIAVNADSMATWFSAVFDGLGD--- 119 G LLR +L++EA+A+ +A + T ++IAVN DS+ TW + L Sbjct 62 GQRLLRRLRPMQVLQAEAMADFLPDAGVGGTPRTLSIAVNDDSLQTWVLSALAELHQAHG 121 Query 120 VLLDVRIEDQDHSARLLREGVAMGAVTTERNPVPGCRVHPLGEMRYLPVASRPFVQRHLS 179 +L DV ++DQDH+ LLR G +GAVT ER P+ GC V PLG MRY +AS V R+ S Sbjct 122 LLFDVHVDDQDHTLELLRAGTVLGAVTAERRPLQGCNVQPLGTMRYHAIASPDVVARYFS 181 Query 180 DGFTAAAAAKAPSLAWNRDDGLQDMLVRKAFRRAITRPTHFVPTTEGFTAAARAGLGWGM 239 G AA ++AP + +NR D LQ R+ R ++ P H++PT+ GF AA GLGW + Sbjct 182 SGLDAAGLSRAPMMVFNRKDALQARFARRITRMQLSPPIHYLPTSTGFVDAAARGLGWCL 241 Query 240 FPEKLAASPLADGSFVRVCDIH--LDVPLYWQCWKLDSPIIARITDTVR-AAASGLYRGQ 296 PE + P + + + D LDVPLYWQ + S + R+ D++R AAA+ L G+ Sbjct 242 APEAMVL-PAVERKTLLIIDPTRWLDVPLYWQHAAVRSTTLQRLGDSLRTAAAASLRVGK 300 Query 297 Q 297 Q Sbjct 301 Q 301 >gi|229820142|ref|YP_002881668.1| chromosome replication initiation inhibitor protein [Beutenbergia cavernae DSM 12333] gi|229566055|gb|ACQ79906.1| transcriptional regulator, LysR family [Beutenbergia cavernae DSM 12333] Length=298 Score = 233 bits (593), Expect = 4e-59, Method: Compositional matrix adjust. Identities = 139/293 (48%), Positives = 174/293 (60%), Gaps = 3/293 (1%) Query 10 QLAALAAVVELGSFDAAAERLHVTPSAVSQRIKSLEQQVGQVLVVREKPCRATTAGIPLL 69 QLAALAAV G+FD AA RLHV+PSAVSQR+K+LEQ VG+VLVVR P R T +G +L Sbjct 7 QLAALAAVASEGTFDGAARRLHVSPSAVSQRVKALEQMVGRVLVVRTHPARMTASGEEVL 66 Query 70 RLAAQTALLESEALAEMGGNASLKRTRITIAVNADSMATWFSAVFDGLGD-VLLDVRIED 128 RLA Q +L +A +G S + + I VNADS+ TW + D V +D+ ED Sbjct 67 RLARQVEVLTDDAGRALGQAPSAPPS-VPIVVNADSLDTWALPALAPVADRVRVDIVRED 125 Query 129 QDHSARLLREGVAMGAVTTERNPVPGCRVHPLGEMRYLPVASRPFVQRHLSDGFTAAAAA 188 QDHSARLLR+G AM AVT+ R PV GC V PLG MRY +A+ + +R DG T A A Sbjct 126 QDHSARLLRDGTAMAAVTSLRTPVQGCTVTPLGRMRYRAMATPAYAERWFPDGVTVDALA 185 Query 189 KAPSLAWNRDDGLQDMLVRKAFRRAITRPTHFVPTTEGFTAAARAGLGWGMFPE-KLAAS 247 AP + ++R D LQD +R+ +RA + P H+VP T FT A R GWG+ E + Sbjct 186 VAPMVVFDRKDDLQDRYLRRRSQRAWSPPRHYVPATAAFTRAVRLSFGWGLLMELDVGVV 245 Query 248 PLADGSFVRVCDIHLDVPLYWQCWKLDSPIIARITDTVRAAASGLYRGQQRRR 300 ADG +DVPLYWQ WKL SP + + V A R RRR Sbjct 246 GAADGLVELDPQRPVDVPLYWQQWKLRSPALDALASAVADGARAALRPPTRRR 298 >gi|66767481|ref|YP_242243.1| chromosome replication initiation inhibitor protein [Xanthomonas campestris pv. campestris str. 8004] gi|66572813|gb|AAY48223.1| transcriptional regulator lysR family [Xanthomonas campestris pv. campestris str. 8004] Length=305 Score = 232 bits (592), Expect = 5e-59, Method: Compositional matrix adjust. Identities = 136/301 (46%), Positives = 186/301 (62%), Gaps = 9/301 (2%) Query 5 QLDGPQLAALAAVVELGSFDAAAERLHVTPSAVSQRIKSLEQQVGQVLVVREKPCRATTA 64 +L PQLAA AAV++ GSF+ AA RL VT SA+SQRIK+LE ++GQVLV+R PCRAT A Sbjct 2 ELLHPQLAAFAAVLDEGSFELAARRLSVTSSAISQRIKALEDRLGQVLVLRTAPCRATPA 61 Query 65 GIPLLRLAAQTALLESEALAEMGGNASLKRT--RITIAVNADSMATWFSAVFDGLGD--- 119 G LLR +L++EA+A+ +A + T ++IAVN DS+ TW + L Sbjct 62 GQRLLRRLRPMQVLQAEAMADFLPDAGVGGTPRTLSIAVNDDSLQTWVLSALAELHQAHG 121 Query 120 VLLDVRIEDQDHSARLLREGVAMGAVTTERNPVPGCRVHPLGEMRYLPVASRPFVQRHLS 179 +L DV ++DQDH+ LLR G +GAVT ER P+ GC V PLG MRY +AS V R+ S Sbjct 122 LLFDVHVDDQDHTLELLRAGTVLGAVTAERRPLQGCNVQPLGTMRYHAIASPDVVARYFS 181 Query 180 DGFTAAAAAKAPSLAWNRDDGLQDMLVRKAFRRAITRPTHFVPTTEGFTAAARAGLGWGM 239 G AA ++AP + +NR D LQ R+ R ++ P H++PT+ GF AA GLGW + Sbjct 182 SGLDAAGLSRAPMMVFNRKDALQARFARRITRMQLSPPIHYLPTSTGFVDAAARGLGWCL 241 Query 240 FPEKLAASPLADGSFVRVCDIH--LDVPLYWQCWKLDSPIIARITDTVR-AAASGLYRGQ 296 PE + P + + + D LDVPLYWQ + S + R+ D++R AAA+ L G+ Sbjct 242 APEAMVL-PAVERKTLLIIDPTRWLDVPLYWQHAAVRSTTLQRLGDSLRTAAAASLRVGK 300 Query 297 Q 297 Q Sbjct 301 Q 301 >gi|341938053|gb|AEL08192.1| transcriptional regulator LysR family [Xanthomonas campestris pv. raphani 756C] Length=305 Score = 232 bits (592), Expect = 5e-59, Method: Compositional matrix adjust. Identities = 136/303 (45%), Positives = 186/303 (62%), Gaps = 13/303 (4%) Query 5 QLDGPQLAALAAVVELGSFDAAAERLHVTPSAVSQRIKSLEQQVGQVLVVREKPCRATTA 64 +L PQLA+ AAV++ GSF+ AA RL VT SA+SQRIK+LE ++GQVLV+R PCRAT A Sbjct 2 ELLHPQLASFAAVLDEGSFELAARRLSVTSSAISQRIKALEDRLGQVLVLRTAPCRATPA 61 Query 65 GIPLLRLAAQTALLESEALAEMGGNASLKRT--RITIAVNADSMATWFSAVFDGLGDV-- 120 G LLR +L++EA+A+ +A + T ++IAVN DS+ TW V L D+ Sbjct 62 GQRLLRRLRPMQVLQAEAMADFLPDAGVGGTPRTLSIAVNDDSLQTW---VLSALADLHQ 118 Query 121 ----LLDVRIEDQDHSARLLREGVAMGAVTTERNPVPGCRVHPLGEMRYLPVASRPFVQR 176 L DV ++DQDH+ LLR G +GAVT ER P+ GC V PLG MRY +AS V R Sbjct 119 AHGLLFDVHVDDQDHTLELLRAGTVLGAVTAERRPLQGCNVQPLGTMRYHAIASPDVVAR 178 Query 177 HLSDGFTAAAAAKAPSLAWNRDDGLQDMLVRKAFRRAITRPTHFVPTTEGFTAAARAGLG 236 + S G AA ++AP + +NR D LQ R+ R ++ P H++PT+ GF AA GLG Sbjct 179 YFSSGLDAAGLSRAPMMVFNRKDALQARFARRITRMQLSPPIHYLPTSTGFVDAAARGLG 238 Query 237 WGMFPEKLAASPLADGSFVRVCDIH-LDVPLYWQCWKLDSPIIARITDTVR-AAASGLYR 294 W + PE + + + V + LDVPLYWQ + S + R+ D++R AAA+ L Sbjct 239 WCLAPEAMVLPAVERKALVIIDPTRWLDVPLYWQHAAVRSTTLQRLGDSLRTAAAASLRV 298 Query 295 GQQ 297 G+Q Sbjct 299 GKQ 301 >gi|21243861|ref|NP_643443.1| chromosome replication initiation inhibitor protein [Xanthomonas axonopodis pv. citri str. 306] gi|21109462|gb|AAM37979.1| transcriptional regulator lysR family [Xanthomonas axonopodis pv. citri str. 306] Length=300 Score = 232 bits (592), Expect = 5e-59, Method: Compositional matrix adjust. Identities = 138/293 (48%), Positives = 180/293 (62%), Gaps = 6/293 (2%) Query 9 PQLAALAAVVELGSFDAAAERLHVTPSAVSQRIKSLEQQVGQVLVVREKPCRATTAGIPL 68 PQLAA AAV+ GSFDAAA+RL +TPSA+SQRIK+LE ++GQVLV+R PCR T AG L Sbjct 6 PQLAAFAAVLNEGSFDAAAQRLALTPSAISQRIKALEDRLGQVLVMRTAPCRPTPAGERL 65 Query 69 LRLAAQTALLESEALAEM--GGNASLKRTRITIAVNADSMATWFSAVFDGLG---DVLLD 123 LR +LE+EA+A++ G + + IAVN DS+ TWF L L D Sbjct 66 LRRLKPMQVLEAEAVADLLPGDRIAGHPRTLAIAVNDDSLQTWFLQALSSLHRAHGFLFD 125 Query 124 VRIEDQDHSARLLREGVAMGAVTTERNPVPGCRVHPLGEMRYLPVASRPFVQRHLSDGFT 183 V+++DQDH+ LLR G +GAVT+ER P+ GC V LG MRY +AS FV H DGFT Sbjct 126 VQMDDQDHTLELLRAGSVLGAVTSERAPLQGCNVQALGVMRYHAIASAAFVAAHFQDGFT 185 Query 184 AAAAAKAPSLAWNRDDGLQDMLVRKAFRRAITRPTHFVPTTEGFTAAARAGLGWGMFPEK 243 A A KAP L +NR D LQ VR+ R +T PTH++PT+ GF AA LGW + PE Sbjct 186 ADALGKAPMLVFNRKDTLQARFVRRITRARLTPPTHYLPTSTGFVEAAARELGWCLAPEA 245 Query 244 LAASPLADGSFVRVCDIH-LDVPLYWQCWKLDSPIIARITDTVRAAASGLYRG 295 + + + V + LDVPLYWQ + S + +++ +R AA+ RG Sbjct 246 MVLPAVRNRQVVIIDPTRWLDVPLYWQYTAVRSNALQQLSQALRKAAATSLRG 298 >gi|253688471|ref|YP_003017661.1| transcriptional regulator, ArgP, LysR family [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251755049|gb|ACT13125.1| transcriptional regulator, ArgP, LysR family [Pectobacterium carotovorum subsp. carotovorum PC1] Length=299 Score = 232 bits (591), Expect = 6e-59, Method: Compositional matrix adjust. Identities = 130/290 (45%), Positives = 166/290 (58%), Gaps = 9/290 (3%) Query 5 QLDGPQLAALAAVVELGSFDAAAERLHVTPSAVSQRIKSLEQQVGQVLVVREKPCRATTA 64 L+ P L A +V GSFD AA +LHVT SA+SQRIK LE Q+GQVL+VR PCRAT Sbjct 2 HLNYPCLRAFMEIVHSGSFDIAARKLHVTQSAISQRIKQLEDQLGQVLIVRGNPCRATPT 61 Query 65 GIPLLRLAAQTALLESEALAEMGGNASLKRTRITIAVNADSMATWFSAVFDGL---GDVL 121 G LLR A Q +LESE + + R RI++AVNADS+ WF + D+L Sbjct 62 GQALLRHAEQIDMLESELFSTLEMPT---RQRISVAVNADSIDGWFLDAMENACHQSDIL 118 Query 122 LDVRIEDQDHSARLLREGVAMGAVTTERNPVPGCRVHPLGEMRYLPVASRPFVQRHLSDG 181 LD+ +EDQDHSA LLREG M AV+ P+ GC V LG MRY S+ F + +DG Sbjct 119 LDILVEDQDHSATLLREGRVMAAVSASPEPIQGCGVEYLGTMRYRAYCSQTFHDTYFADG 178 Query 182 FTAAAAAKAPSLAWNRDDGLQDMLVRKAFRRAITRPTHFVPTTEGFTAAARAGLGWGMFP 241 A + AP L +N D LQ + + I P FVP+T F A GLGWGM P Sbjct 179 INADSLQNAPLLIFNNKDRLQSLFIESLVPEVIEPPQQFVPSTAAFVGAIFRGLGWGMIP 238 Query 242 EKLAASPLADGSFV--RVCDIHLDVPLYWQCWKLDSPIIARITDTVRAAA 289 E +A+S G V +V D +D+ LYW W + S + ++ +VRAAA Sbjct 239 EHMASSHTEKGELVPFQVGD-PVDIRLYWHRWNIRSASLEALSQSVRAAA 287 >gi|294626849|ref|ZP_06705441.1| chromosome replication initiation inhibitor protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292598863|gb|EFF43008.1| chromosome replication initiation inhibitor protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] Length=300 Score = 231 bits (590), Expect = 7e-59, Method: Compositional matrix adjust. Identities = 140/294 (48%), Positives = 181/294 (62%), Gaps = 8/294 (2%) Query 9 PQLAALAAVVELGSFDAAAERLHVTPSAVSQRIKSLEQQVGQVLVVREKPCRATTAGIPL 68 PQLAA AAV+E GSFDAAA+RL +TPSA+SQRIK+LE ++GQVLV+R PCR T AG L Sbjct 6 PQLAAFAAVLEEGSFDAAAQRLALTPSAISQRIKALEDRLGQVLVMRTAPCRPTPAGERL 65 Query 69 LRLAAQTALLESEALAEM---GGNASLKRTRITIAVNADSMATWFSAVFDGLG---DVLL 122 LR +LE+EA+A+ G A RT + IAVN DS+ TWF L L Sbjct 66 LRRLKPMQVLEAEAVADFLPADGIAGHPRT-LAIAVNDDSLQTWFLQALSSLHRAHGFLF 124 Query 123 DVRIEDQDHSARLLREGVAMGAVTTERNPVPGCRVHPLGEMRYLPVASRPFVQRHLSDGF 182 DV+++DQDH+ LLR G +GAVT+ER P+ GC V LG MRY +AS FV H GF Sbjct 125 DVQMDDQDHTLELLRAGSVLGAVTSERAPLQGCNVQALGVMRYHAIASAAFVAAHFQGGF 184 Query 183 TAAAAAKAPSLAWNRDDGLQDMLVRKAFRRAITRPTHFVPTTEGFTAAARAGLGWGMFPE 242 TA A KAP L +NR D LQ VR+ R ++ PTH++PT+ GF AA GLGW + PE Sbjct 185 TAHALGKAPMLVFNRKDTLQARFVRRITRTQLSPPTHYLPTSTGFVEAAARGLGWCLAPE 244 Query 243 KLAASPLADGSFVRVCDIH-LDVPLYWQCWKLDSPIIARITDTVRAAASGLYRG 295 + + + V + LDVPLYWQ + S + +++ + AA+ RG Sbjct 245 AMVLPAVRNKQVVIIDPTRWLDVPLYWQYAAVRSNALQQLSQALCKAAATSLRG 298 >gi|254524195|ref|ZP_05136250.1| chromosome replication initiation inhibitor protein [Stenotrophomonas sp. SKA14] gi|219721786|gb|EED40311.1| chromosome replication initiation inhibitor protein [Stenotrophomonas sp. SKA14] Length=301 Score = 231 bits (588), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 135/297 (46%), Positives = 178/297 (60%), Gaps = 7/297 (2%) Query 5 QLDGPQLAALAAVVELGSFDAAAERLHVTPSAVSQRIKSLEQQVGQVLVVREKPCRATTA 64 ++D QL ALAAV+ GSFD AA+ L+VTPSA+SQR+K+LE +VG++LV R P AT Sbjct 2 RIDHAQLRALAAVIREGSFDRAAQSLNVTPSAISQRVKALEDRVGRLLVKRGTPATATAE 61 Query 65 GIPLLRLAAQTALLESEALAEMG-GNASLKRTRITIAVNADSMATWF---SAVFDGLGDV 120 G L++LA QTALLE +AL MG + L + I +AVN DS+ TWF ++ F Sbjct 62 GQVLVQLAEQTALLEHDALHRMGLADEDLPQASIPVAVNHDSLETWFPQAASQFAQSTGT 121 Query 121 LLDVRIEDQDHSARLLREGVAMGAVTTERNPVPGCRVHPLGEMRYLPVASRPFVQRHLSD 180 LD+R+EDQDH+ LLR+G +GAVTT PV GC++H LG +RY + F +RH + Sbjct 122 TLDLRVEDQDHTVELLRQGTVLGAVTTLDEPVQGCQIHALGSIRYAATCTPEFRERHFAK 181 Query 181 GFTAAAAAKAPSLAWNRDDGLQDMLVRKAFRRAI--TRPTHFVPTTEGFTAAARAGLGWG 238 G TA A A+AP L +NR D +Q R+ + T PT ++P+T F A G+GW Sbjct 182 GVTAQALAQAPVLVFNRKDDMQSRFARRMAGDDLPSTAPTWWIPSTRAFVQANLGGMGWT 241 Query 239 MFPEKLAASPLADGSFVRVCD-IHLDVPLYWQCWKLDSPIIARITDTVRAAASGLYR 294 M P L L G V V DVPLYWQ WK D +A +T V A+S L R Sbjct 242 MNPLPLVKRHLDAGRLVYVRQRAWEDVPLYWQHWKGDVQTMALLTRAVLDASSALIR 298 >gi|187476705|ref|YP_784728.1| chromosome replication initiation inhibitor protein [Bordetella avium 197N] gi|115421291|emb|CAJ47796.1| putative lysine export transcriptional regulator [Bordetella avium 197N] Length=304 Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 138/299 (47%), Positives = 177/299 (60%), Gaps = 6/299 (2%) Query 5 QLDGPQLAALAAVVELGSFDAAAERLHVTPSAVSQRIKSLEQQVGQVLVVREKPCRATTA 64 +LD L ALAAVV GSF+ AA LHVTPSAVSQRIK+LE + G++LV+R P RAT Sbjct 2 KLDHDHLRALAAVVREGSFERAAAALHVTPSAVSQRIKALEDRSGRLLVMRTMPARATPD 61 Query 65 GIPLLRLAAQTALLESEALAEMG-GNASLKRTRITIAVNADSMATWF---SAVFDGLGDV 120 G L++LA QTAL+E +AL +G L + I +AVN DS+ TWF + F Sbjct 62 GQVLVQLAEQTALMEHDALLRLGVAEDELTQASIAVAVNHDSLETWFVDAAVRFAARSRA 121 Query 121 LLDVRIEDQDHSARLLREGVAMGAVTTERNPVPGCRVHPLGEMRYLPVASRPFVQRHLSD 180 LD++ EDQDH+A LLR G +GAVT PV GCR+HPLG MRY+ S F R+ S Sbjct 122 TLDMQSEDQDHTAALLRNGAVLGAVTALAEPVQGCRIHPLGGMRYVATCSPAFQARYFSQ 181 Query 181 GFTAAAAAKAPSLAWNRDDGLQDMLVRKAF-RRAITRPTHFVPTTEGFTAAARAGLGWGM 239 G A + A+AP LA+NR D LQ R+ R P +VP++ F A GLGW M Sbjct 182 GVNARSLAQAPVLAFNRKDDLQGRFARRIMGREPWQPPVWWVPSSRAFVQATLNGLGWAM 241 Query 240 FPEKLAASPLADGSFVRV-CDIHLDVPLYWQCWKLDSPIIARITDTVRAAASGLYRGQQ 297 P L L G V + DVPL+WQ W+++S + +TD+V AAA L R +Q Sbjct 242 NPLPLIKEELDSGRLVPLRARAWEDVPLFWQHWRVNSQAMLILTDSVLAAARTLVRKRQ 300 >gi|294665418|ref|ZP_06730706.1| chromosome replication initiation inhibitor protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292604829|gb|EFF48192.1| chromosome replication initiation inhibitor protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length=300 Score = 230 bits (587), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 142/295 (49%), Positives = 181/295 (62%), Gaps = 10/295 (3%) Query 9 PQLAALAAVVELGSFDAAAERLHVTPSAVSQRIKSLEQQVGQVLVVREKPCRATTAGIPL 68 PQLAA AAV+E GSFDAAA+RL +TPSA+SQRIK+LE ++GQVLV+R PCR T AG L Sbjct 6 PQLAAFAAVLEEGSFDAAAQRLALTPSAISQRIKALEDRLGQVLVMRTAPCRPTPAGERL 65 Query 69 LRLAAQTALLESEALAEM---GGNASLKRTRITIAVNADSMATWFSAVFDGLG---DVLL 122 LR +LE+EA+A+ G A RT + IAVN DS+ TWF L L Sbjct 66 LRRLKPMQVLEAEAVADFLPADGIAGHPRT-LAIAVNDDSLQTWFLQALSSLHRAHGFLF 124 Query 123 DVRIEDQDHSARLLREGVAMGAVTTERNPVPGCRVHPLGEMRYLPVASRPFVQRHLSDGF 182 DV+++DQDH+ LLR G +GAVT+ER P+ GC V LG MRY +AS FV H GF Sbjct 125 DVQMDDQDHTLELLRAGSVLGAVTSERAPLQGCNVQALGVMRYHAIASAAFVAAHFQGGF 184 Query 183 TAAAAAKAPSLAWNRDDGLQDMLVRKAFRRAITRPTHFVPTTEGFTAAARAGLGWGMFPE 242 TA A KAP L +NR D LQ VR+ R ++ PTH++PT+ GF AA GLGW + PE Sbjct 185 TAHALGKAPMLVFNRKDTLQARFVRRITRTRLSPPTHYLPTSTGFVEAAARGLGWCLAPE 244 Query 243 KLAASPLADGSFVRVCDIH--LDVPLYWQCWKLDSPIIARITDTVRAAASGLYRG 295 + P V + D LDVPLYWQ + S + +++ + AA+ RG Sbjct 245 AMVL-PAVRNKQVVITDPTRWLDVPLYWQYAAVRSNALQQLSQALCKAAATSLRG 298 >gi|190573262|ref|YP_001971107.1| chromosome replication initiation inhibitor protein [Stenotrophomonas maltophilia K279a] gi|190011184|emb|CAQ44793.1| putative LysR-family transcriptional regulator [Stenotrophomonas maltophilia K279a] Length=301 Score = 229 bits (585), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 134/297 (46%), Positives = 177/297 (60%), Gaps = 7/297 (2%) Query 5 QLDGPQLAALAAVVELGSFDAAAERLHVTPSAVSQRIKSLEQQVGQVLVVREKPCRATTA 64 ++D QL ALAAV+ GSFD AA+ L+VTPSA+SQR+K+LE ++G++LV R P AT Sbjct 2 RIDHAQLRALAAVIREGSFDRAAQSLNVTPSAISQRVKALEDRIGRLLVKRGTPATATAE 61 Query 65 GIPLLRLAAQTALLESEALAEMG-GNASLKRTRITIAVNADSMATWF---SAVFDGLGDV 120 G L++LA QTALLE +AL MG + L + I +AVN DS+ TWF + F Sbjct 62 GQLLVQLAEQTALLEHDALHRMGLADEDLPQASIPVAVNHDSLETWFPQAAYQFAQTTGT 121 Query 121 LLDVRIEDQDHSARLLREGVAMGAVTTERNPVPGCRVHPLGEMRYLPVASRPFVQRHLSD 180 LD+R+EDQDH+ LLR+G +GAVTT PV GC++H LG +RY + F +RH + Sbjct 122 TLDLRVEDQDHTVELLRQGTVLGAVTTLDEPVQGCQIHALGSIRYAATCTPEFRERHFAK 181 Query 181 GFTAAAAAKAPSLAWNRDDGLQDMLVRKAFRRAI--TRPTHFVPTTEGFTAAARAGLGWG 238 G TA A A+AP L +NR D +Q R+ + T PT ++P+T F A G+GW Sbjct 182 GVTAQALAQAPVLVFNRKDDMQSRFARRMAGDDLPSTAPTWWIPSTRAFVQANLGGMGWT 241 Query 239 MFPEKLAASPLADGSFVRVCD-IHLDVPLYWQCWKLDSPIIARITDTVRAAASGLYR 294 M P L L G V V DVPLYWQ WK D +A +T V A+S L R Sbjct 242 MNPLPLVKRHLDAGRLVYVRQRAWEDVPLYWQHWKGDVQTMALLTRAVLDASSALIR 298 >gi|344206487|ref|YP_004791628.1| LysR family transcriptional regulator ArgP [Burkholderia sp. JV3] gi|343777849|gb|AEM50402.1| transcriptional regulator, ArgP, LysR family [Burkholderia sp. JV3] Length=301 Score = 229 bits (585), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 135/297 (46%), Positives = 177/297 (60%), Gaps = 7/297 (2%) Query 5 QLDGPQLAALAAVVELGSFDAAAERLHVTPSAVSQRIKSLEQQVGQVLVVREKPCRATTA 64 ++D QL ALAAV+ GSFD AA L+VTPSA+SQR+K+LE ++G++LV R P AT Sbjct 2 RIDHAQLRALAAVIREGSFDRAAHSLNVTPSAISQRVKALEDRIGRLLVKRGTPATATAE 61 Query 65 GIPLLRLAAQTALLESEALAEMG-GNASLKRTRITIAVNADSMATWF---SAVFDGLGDV 120 G L++LA QTALLE +AL MG + L + I +AVN DS+ TWF +A F Sbjct 62 GQLLVQLAEQTALLEHDALHRMGLADEDLPQASIPVAVNHDSLETWFPQAAAQFAQGTGT 121 Query 121 LLDVRIEDQDHSARLLREGVAMGAVTTERNPVPGCRVHPLGEMRYLPVASRPFVQRHLSD 180 LD+R+EDQDH+ LLR+G +GAVTT PV GC++H LG +RY + F +RH + Sbjct 122 TLDLRVEDQDHTVELLRQGTVLGAVTTLDEPVQGCQIHALGSIRYAATCTPEFRERHFAK 181 Query 181 GFTAAAAAKAPSLAWNRDDGLQDMLVRKAFRRAI--TRPTHFVPTTEGFTAAARAGLGWG 238 G TA A A+AP L +NR D +Q R+ + T PT ++P+T F A G+GW Sbjct 182 GVTAQALAQAPVLVFNRKDEMQSRFARRMAGDDLPSTAPTWWIPSTRAFVQANLGGMGWT 241 Query 239 MFPEKLAASPLADGSFVRVCD-IHLDVPLYWQCWKLDSPIIARITDTVRAAASGLYR 294 M P L L G V V DVPLYWQ WK D +A +T V A+S L R Sbjct 242 MNPLPLVKRHLDAGRLVYVRQRAWEDVPLYWQHWKGDVQTMALLTRAVLDASSALIR 298 >gi|226362810|ref|YP_002780588.1| chromosome replication initiation inhibitor protein [Rhodococcus opacus B4] gi|226241295|dbj|BAH51643.1| LysR family transcriptional regulator [Rhodococcus opacus B4] Length=291 Score = 229 bits (584), Expect = 4e-58, Method: Compositional matrix adjust. Identities = 138/288 (48%), Positives = 171/288 (60%), Gaps = 8/288 (2%) Query 6 LDGPQLAALAAVVELGSFDAAAERLHVTPSAVSQRIKSLEQQVGQVLVVREKPCRATTAG 65 LD L AAV++ G+FDAAA LH+TPSAVSQRIK+LEQQVG+VLV R KP RAT +G Sbjct 3 LDLAALRTFAAVIDEGTFDAAARVLHITPSAVSQRIKALEQQVGRVLVQRAKPVRATESG 62 Query 66 IPLLRLAAQTALLESEALAEMGGNASLKRTRITIAVNADSMATWFSAVFDGLGD---VLL 122 +L LA Q A LE EA++ + + T +++ VNADS++TW L L Sbjct 63 HVVLTLARQMAHLEREAMSSLNPEEATTST-LSLVVNADSLSTWMIPALARLAPEHRALF 121 Query 123 DVRIEDQDHSARLLREGVAMGAVTTERNPVPGCRVHPLGEMRYLPVASRPFVQRHLSDGF 182 D+ ED+ HS LLREG M AVT+ V GC V LG MRY + SR + R L DG Sbjct 122 DLHREDEFHSTTLLREGTVMAAVTSVPEAVQGCTVEKLGSMRYRALCSRDYADRWLPDGP 181 Query 183 TAAAAAKAPSLAWNRDDGLQDMLVRKAFRRAITRPTHFVPTTEGFTAAARAGLGWGMFPE 242 TA A A AP L ++R D LQ +R RR + P HFVP + F+ A R GLGWG+ PE Sbjct 182 TADALAVAPMLDFDRKDELQARFLRGFTRRRLQPPRHFVPGSSAFSDAVRHGLGWGLLPE 241 Query 243 KLAASPLADGSFVRVCDIH-LDVPLYWQCWKLDSPIIARITDTVRAAA 289 D V + +DVPLYWQ WKLDSPI+A +T VR A Sbjct 242 LHTGD---DHGLVELDPSRPVDVPLYWQRWKLDSPILAALTTAVRDGA 286 >gi|111020585|ref|YP_703557.1| chromosome replication initiation inhibitor protein [Rhodococcus jostii RHA1] gi|110820115|gb|ABG95399.1| probable transcriptional regulator, LysR family protein [Rhodococcus jostii RHA1] Length=291 Score = 229 bits (584), Expect = 4e-58, Method: Compositional matrix adjust. Identities = 137/288 (48%), Positives = 171/288 (60%), Gaps = 8/288 (2%) Query 6 LDGPQLAALAAVVELGSFDAAAERLHVTPSAVSQRIKSLEQQVGQVLVVREKPCRATTAG 65 LD L AAV++ G+FDAAA LH+TPSAVSQRIK+LEQQVG+VLV R KP RAT +G Sbjct 3 LDRASLRTFAAVIDEGTFDAAARVLHITPSAVSQRIKALEQQVGRVLVQRAKPVRATESG 62 Query 66 IPLLRLAAQTALLESEALAEMGGNASLKRTRITIAVNADSMATWFSAVFDGLGD---VLL 122 +L LA Q A LE EA++ + + T +++ VNADS++TW L L Sbjct 63 HVVLTLARQMAHLEREAMSSLNPEEATTST-LSLVVNADSLSTWMIPALARLAPEHRALF 121 Query 123 DVRIEDQDHSARLLREGVAMGAVTTERNPVPGCRVHPLGEMRYLPVASRPFVQRHLSDGF 182 D+ ED+ HS LL+EG M AVT+ V GC V LG MRY + SR + R L DG Sbjct 122 DLHREDEFHSTTLLKEGTVMAAVTSVPEAVQGCTVEKLGSMRYRALCSRDYADRWLPDGP 181 Query 183 TAAAAAKAPSLAWNRDDGLQDMLVRKAFRRAITRPTHFVPTTEGFTAAARAGLGWGMFPE 242 TA A A AP L ++R D LQ +R RR + P HFVP + F+ A R GLGWG+ PE Sbjct 182 TADALAVAPMLDFDRKDELQARFLRGFTRRRLQPPRHFVPGSSAFSDAVRHGLGWGLLPE 241 Query 243 KLAASPLADGSFVRVCDIH-LDVPLYWQCWKLDSPIIARITDTVRAAA 289 D V + +DVPLYWQ WKLDSPI+A +T VR A Sbjct 242 LHTGD---DHGLVELDPSRPVDVPLYWQRWKLDSPILAALTTAVRDGA 286 >gi|194364863|ref|YP_002027473.1| chromosome replication initiation inhibitor protein [Stenotrophomonas maltophilia R551-3] gi|194347667|gb|ACF50790.1| transcriptional regulator, LysR family [Stenotrophomonas maltophilia R551-3] Length=301 Score = 229 bits (583), Expect = 5e-58, Method: Compositional matrix adjust. Identities = 135/297 (46%), Positives = 175/297 (59%), Gaps = 7/297 (2%) Query 5 QLDGPQLAALAAVVELGSFDAAAERLHVTPSAVSQRIKSLEQQVGQVLVVREKPCRATTA 64 ++D QL ALAAV+ GSFD AA+ L+VTPSA+SQR+K+LE +VG++LV R P AT Sbjct 2 RIDHAQLRALAAVIREGSFDRAAQSLNVTPSAISQRVKALEDRVGRLLVKRGTPATATAE 61 Query 65 GIPLLRLAAQTALLESEALAEMG-GNASLKRTRITIAVNADSMATWFSAV---FDGLGDV 120 G L++LA QTALLE +AL MG + L + I +AVN DS+ TWF F Sbjct 62 GQVLVQLAEQTALLEHDALHRMGLADEDLPQASIPVAVNHDSLETWFPQAAFQFAQSTGT 121 Query 121 LLDVRIEDQDHSARLLREGVAMGAVTTERNPVPGCRVHPLGEMRYLPVASRPFVQRHLSD 180 LD+R+EDQDH+ LLR+G +GAVTT PV GC++H LG +RY + F +RH + Sbjct 122 TLDLRVEDQDHTVELLRQGTVLGAVTTLDEPVQGCQIHALGSIRYAATCTPEFRERHFAK 181 Query 181 GFTAAAAAKAPSLAWNRDDGLQDMLVRKAFRRAI--TRPTHFVPTTEGFTAAARAGLGWG 238 G TA A A AP L +NR D +Q R+ + T PT ++P+T F A G+GW Sbjct 182 GVTAQALATAPVLVFNRKDEMQSRFARRMAGDDLPSTAPTWWIPSTRAFVQANLGGMGWT 241 Query 239 MFPEKLAASPLADGSFVRVCD-IHLDVPLYWQCWKLDSPIIARITDTVRAAASGLYR 294 M P L L G V V DVPLYWQ WK D +A +T V A+S L R Sbjct 242 MNPLPLVKRHLDAGRLVYVRQRAWEDVPLYWQHWKGDVQTMALLTRAVLEASSALVR 298 >gi|332285625|ref|YP_004417536.1| chromosome replication initiation inhibitor protein [Pusillimonas sp. T7-7] gi|330429578|gb|AEC20912.1| chromosome replication initiation inhibitor protein [Pusillimonas sp. T7-7] Length=298 Score = 229 bits (583), Expect = 5e-58, Method: Compositional matrix adjust. Identities = 134/295 (46%), Positives = 180/295 (62%), Gaps = 5/295 (1%) Query 5 QLDGPQLAALAAVVELGSFDAAAERLHVTPSAVSQRIKSLEQQVGQVLVVREKPCRATTA 64 ++D L ALAAVV GSF+ AA L+VTPSAVSQRIKSLE+++G++LV R P AT Sbjct 2 KIDHGNLRALAAVVREGSFERAAAALNVTPSAVSQRIKSLEERMGRLLVQRTVPAAATPD 61 Query 65 GIPLLRLAAQTALLESEALAEMGGNASLKRTRITIAVNADSMATWF---SAVFDGLGDVL 121 G L++LA QTALLE +A++ +G + + + + +AVN DS+ TWF + +F Sbjct 62 GQVLVQLAEQTALLEHDAISRLGIDEHMPQASLAVAVNHDSLETWFMQAAELFAARTRTT 121 Query 122 LDVRIEDQDHSARLLREGVAMGAVTTERNPVPGCRVHPLGEMRYLPVASRPFVQRHLSDG 181 LD++ EDQDH+A LLR G +GAVTT +PV GCR + LG MRY+ S F R+ + G Sbjct 122 LDLQSEDQDHTAELLRNGAVLGAVTTLADPVQGCRHYALGSMRYVATCSPEFHARYFATG 181 Query 182 FTAAAAAKAPSLAWNRDDGLQDMLVRKAFRRAITRP-THFVPTTEGFTAAARAGLGWGMF 240 AA+ A AP L +NR D LQ +K R RP ++P++ F A AGLGW M Sbjct 182 LNAASLATAPVLVFNRKDALQARFAQKIMRDVPWRPAVWWLPSSRAFVQATLAGLGWTMN 241 Query 241 PEKLAASPLADGSFVRV-CDIHLDVPLYWQCWKLDSPIIARITDTVRAAASGLYR 294 P L L DG V + DVPLYWQ W+ +S + +T++V AAA GL R Sbjct 242 PLPLIQHHLDDGRLVPLRSRAWEDVPLYWQHWRANSSAMDALTESVLAAAQGLVR 296 Lambda K H 0.322 0.134 0.403 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 508884486504 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40