BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv1989c Length=186 Score E Sequences producing significant alignments: (Bits) Value gi|15609126|ref|NP_216505.1| hypothetical protein Rv1989c [Mycob... 377 4e-103 gi|289570088|ref|ZP_06450315.1| hypothetical protein TBJG_00455 ... 376 1e-102 gi|119854993|ref|YP_935598.1| hypothetical protein Mkms_5600 [My... 325 2e-87 gi|126437109|ref|YP_001072800.1| hypothetical protein Mjls_4540 ... 309 1e-82 gi|126437138|ref|YP_001072829.1| hypothetical protein Mjls_4571 ... 228 2e-58 gi|108802399|ref|YP_642595.1| hypothetical protein Mmcs_5439 [My... 74.7 5e-12 gi|340030870|ref|ZP_08666933.1| hypothetical protein PaTRP_19294... 49.3 2e-04 gi|299135817|ref|ZP_07029001.1| RES domain protein [Acidobacteri... 46.6 0.002 gi|311747907|ref|ZP_07721692.1| putative toxin-antitoxin system,... 45.1 0.004 gi|37522294|ref|NP_925671.1| hypothetical protein glr2725 [Gloeo... 43.9 0.010 gi|241113603|ref|YP_002973438.1| RES domain-containing protein [... 39.7 0.22 gi|322832118|ref|YP_004212145.1| RES domain protein [Rahnella sp... 39.7 0.22 gi|153830315|ref|ZP_01982982.1| RES domain superfamily [Vibrio c... 39.3 0.24 gi|153212488|ref|ZP_01948257.1| conserved hypothetical protein [... 39.3 0.25 gi|254500064|ref|ZP_05112217.1| RES domain superfamily [Labrenzi... 39.3 0.28 gi|260909892|ref|ZP_05916581.1| conserved hypothetical protein [... 39.3 0.28 gi|148243882|ref|YP_001220121.1| hypothetical protein Acry_3368 ... 39.3 0.29 gi|158421488|ref|YP_001527715.1| RES domain-containing protein [... 38.9 0.33 gi|284037021|ref|YP_003386951.1| RES domain protein [Spirosoma l... 38.9 0.33 gi|294506051|ref|YP_003570109.1| hypothetical protein SRM_00236 ... 38.9 0.35 gi|90421958|ref|YP_530328.1| hypothetical protein RPC_0434 [Rhod... 38.9 0.38 gi|149191690|ref|ZP_01869932.1| hypothetical protein VSAK1_14712... 38.5 0.41 gi|37526260|ref|NP_929604.1| hypothetical protein plu2358 [Photo... 38.5 0.42 gi|341641912|gb|EGS66427.1| RES domain protein [Vibrio cholerae ... 38.5 0.46 gi|296533095|ref|ZP_06895731.1| RES domain protein [Roseomonas c... 38.5 0.48 gi|304394852|ref|ZP_07376738.1| putative toxin-antitoxin system,... 38.1 0.56 gi|121592997|ref|YP_984893.1| hypothetical protein Ajs_0567 [Aci... 37.7 0.70 gi|45441926|ref|NP_993465.1| hypothetical protein YP_2133 [Yersi... 37.7 0.74 gi|294503641|ref|YP_003567703.1| hypothetical protein YPZ3_1531 ... 37.7 0.74 gi|51596588|ref|YP_070779.1| hypothetical protein YPTB2264 [Yers... 37.7 0.74 gi|268589597|ref|ZP_06123818.1| putative toxin-antitoxin system,... 37.4 0.92 gi|16264455|ref|NP_437247.1| hypothetical protein SM_b21128 [Sin... 37.4 1.0 gi|336037787|gb|AEH83717.1| conserved hypothetical membrane-anch... 37.4 1.1 gi|333815593|gb|AEG08260.1| RES domain protein [Sinorhizobium me... 37.4 1.1 gi|253989642|ref|YP_003040998.1| hypothetical protein PAU_02162 ... 37.0 1.3 gi|255036737|ref|YP_003087358.1| RES domain-containing protein [... 37.0 1.3 gi|333983662|ref|YP_004512872.1| RES domain-containing protein [... 37.0 1.5 gi|126665151|ref|ZP_01736134.1| hypothetical protein MELB17_1882... 36.6 1.6 gi|336171414|ref|YP_004578552.1| RES domain-containing protein [... 36.6 1.8 gi|251779438|ref|ZP_04822358.1| hypothetical protein CLO_0561 [C... 36.2 2.1 gi|123442377|ref|YP_001006356.1| hypothetical protein YE2116 [Ye... 36.2 2.4 gi|345135582|dbj|BAK65191.1| hypothetical protein SLG_05160 [Sph... 36.2 2.5 gi|333894951|ref|YP_004468826.1| RES domain-containing protein [... 36.2 2.6 gi|334320904|ref|YP_004557533.1| RES domain-containing protein [... 35.8 2.6 gi|238792255|ref|ZP_04635890.1| RES domain protein [Yersinia int... 35.8 2.8 gi|238787180|ref|ZP_04630980.1| RES domain protein [Yersinia fre... 35.8 3.0 gi|197122497|ref|YP_002134448.1| RES domain-containing protein [... 35.8 3.1 gi|332161698|ref|YP_004298275.1| hypothetical protein YE105_C207... 35.8 3.2 gi|238762536|ref|ZP_04623506.1| RES domain protein [Yersinia kri... 35.8 3.2 gi|238749387|ref|ZP_04610892.1| RES domain protein [Yersinia roh... 35.8 3.2 >gi|15609126|ref|NP_216505.1| hypothetical protein Rv1989c [Mycobacterium tuberculosis H37Rv] gi|15841468|ref|NP_336505.1| hypothetical protein MT2043 [Mycobacterium tuberculosis CDC1551] gi|31793168|ref|NP_855661.1| hypothetical protein Mb2011c [Mycobacterium bovis AF2122/97] 78 more sequence titles Length=186 Score = 377 bits (968), Expect = 4e-103, Method: Compositional matrix adjust. Identities = 185/186 (99%), Positives = 186/186 (100%), Gaps = 0/186 (0%) Query 1 VSDALDEGLVQRIDARGTIEWSETCYRYTGAHRDALSGEGARRFGGRWNPPLLFPAIYLA 60 +SDALDEGLVQRIDARGTIEWSETCYRYTGAHRDALSGEGARRFGGRWNPPLLFPAIYLA Sbjct 1 MSDALDEGLVQRIDARGTIEWSETCYRYTGAHRDALSGEGARRFGGRWNPPLLFPAIYLA 60 Query 61 DSAQACMVEVERAAQAASTTAEKMLEAAYRLHTIDVTDLAVLDLTTPQAREAVGLENDDI 120 DSAQACMVEVERAAQAASTTAEKMLEAAYRLHTIDVTDLAVLDLTTPQAREAVGLENDDI Sbjct 61 DSAQACMVEVERAAQAASTTAEKMLEAAYRLHTIDVTDLAVLDLTTPQAREAVGLENDDI 120 Query 121 YGDDWSGCQAVGHAAWFLHMQGVLVPAAGGVGLVVTAYEQRTRPGQLQLRQSVDLTPALY 180 YGDDWSGCQAVGHAAWFLHMQGVLVPAAGGVGLVVTAYEQRTRPGQLQLRQSVDLTPALY Sbjct 121 YGDDWSGCQAVGHAAWFLHMQGVLVPAAGGVGLVVTAYEQRTRPGQLQLRQSVDLTPALY 180 Query 181 QELRAT 186 QELRAT Sbjct 181 QELRAT 186 >gi|289570088|ref|ZP_06450315.1| hypothetical protein TBJG_00455 [Mycobacterium tuberculosis T17] gi|289543842|gb|EFD47490.1| hypothetical protein TBJG_00455 [Mycobacterium tuberculosis T17] Length=186 Score = 376 bits (965), Expect = 1e-102, Method: Compositional matrix adjust. Identities = 184/186 (99%), Positives = 185/186 (99%), Gaps = 0/186 (0%) Query 1 VSDALDEGLVQRIDARGTIEWSETCYRYTGAHRDALSGEGARRFGGRWNPPLLFPAIYLA 60 +SDALDEGLVQRIDARGTIEWSETCYRYTGAHRDALSGEGARRFGGRWNPPLLFPAIYLA Sbjct 1 MSDALDEGLVQRIDARGTIEWSETCYRYTGAHRDALSGEGARRFGGRWNPPLLFPAIYLA 60 Query 61 DSAQACMVEVERAAQAASTTAEKMLEAAYRLHTIDVTDLAVLDLTTPQAREAVGLENDDI 120 DSAQACMVEVERAAQAASTTAEKMLEAAYRLHTIDVTDLAVLDLTTPQAREAVG ENDDI Sbjct 61 DSAQACMVEVERAAQAASTTAEKMLEAAYRLHTIDVTDLAVLDLTTPQAREAVGFENDDI 120 Query 121 YGDDWSGCQAVGHAAWFLHMQGVLVPAAGGVGLVVTAYEQRTRPGQLQLRQSVDLTPALY 180 YGDDWSGCQAVGHAAWFLHMQGVLVPAAGGVGLVVTAYEQRTRPGQLQLRQSVDLTPALY Sbjct 121 YGDDWSGCQAVGHAAWFLHMQGVLVPAAGGVGLVVTAYEQRTRPGQLQLRQSVDLTPALY 180 Query 181 QELRAT 186 QELRAT Sbjct 181 QELRAT 186 >gi|119854993|ref|YP_935598.1| hypothetical protein Mkms_5600 [Mycobacterium sp. KMS] gi|145226005|ref|YP_001136659.1| hypothetical protein Mflv_5410 [Mycobacterium gilvum PYR-GCK] gi|119697711|gb|ABL94783.1| conserved hypothetical protein [Mycobacterium sp. KMS] gi|145218468|gb|ABP47871.1| conserved hypothetical protein [Mycobacterium gilvum PYR-GCK] Length=186 Score = 325 bits (833), Expect = 2e-87, Method: Compositional matrix adjust. Identities = 158/184 (86%), Positives = 172/184 (94%), Gaps = 0/184 (0%) Query 1 VSDALDEGLVQRIDARGTIEWSETCYRYTGAHRDALSGEGARRFGGRWNPPLLFPAIYLA 60 +SDALDEGLVQRIDARGTI+WS TC RYTGA RD LSGEGARRFGGRWNPPLLF AIYLA Sbjct 1 MSDALDEGLVQRIDARGTIQWSGTCARYTGARRDPLSGEGARRFGGRWNPPLLFSAIYLA 60 Query 61 DSAQACMVEVERAAQAASTTAEKMLEAAYRLHTIDVTDLAVLDLTTPQAREAVGLENDDI 120 DSAQACMVEVERAAQAASTT EK+LEA+YRLHTI+ TDL+VLDLTTP+AREAVGLE+DDI Sbjct 61 DSAQACMVEVERAAQAASTTPEKLLEASYRLHTIEATDLSVLDLTTPEAREAVGLEDDDI 120 Query 121 YGDDWSGCQAVGHAAWFLHMQGVLVPAAGGVGLVVTAYEQRTRPGQLQLRQSVDLTPALY 180 +GDDWS CQAVGHAAWFLH+QGVLVPAAGGVGLV+TAYEQRTRPGQLQ+ +S LTPA Y Sbjct 121 HGDDWSACQAVGHAAWFLHVQGVLVPAAGGVGLVITAYEQRTRPGQLQVTRSEHLTPARY 180 Query 181 QELR 184 +ELR Sbjct 181 RELR 184 >gi|126437109|ref|YP_001072800.1| hypothetical protein Mjls_4540 [Mycobacterium sp. JLS] gi|126236909|gb|ABO00310.1| conserved hypothetical protein [Mycobacterium sp. JLS] Length=189 Score = 309 bits (792), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 152/184 (83%), Positives = 161/184 (88%), Gaps = 0/184 (0%) Query 1 VSDALDEGLVQRIDARGTIEWSETCYRYTGAHRDALSGEGARRFGGRWNPPLLFPAIYLA 60 +SDALDE LVQRIDARGT WS TC RYTGAHRD LSGEGARRFGGRWNP LF AIYLA Sbjct 1 MSDALDEDLVQRIDARGTSRWSGTCARYTGAHRDPLSGEGARRFGGRWNPAGLFSAIYLA 60 Query 61 DSAQACMVEVERAAQAASTTAEKMLEAAYRLHTIDVTDLAVLDLTTPQAREAVGLENDDI 120 DS +ACMVEVERAAQAASTT EKMLEA+YRLHTI+ TDLAVLDL T AREAVGLE+DDI Sbjct 61 DSTRACMVEVERAAQAASTTPEKMLEASYRLHTIEATDLAVLDLITSDAREAVGLEDDDI 120 Query 121 YGDDWSGCQAVGHAAWFLHMQGVLVPAAGGVGLVVTAYEQRTRPGQLQLRQSVDLTPALY 180 YGDDWS CQAVGHAAWFLH+QGVLVPAAGG+GLV+TAYEQRTRPGQL + S DLTP Y Sbjct 121 YGDDWSACQAVGHAAWFLHVQGVLVPAAGGIGLVITAYEQRTRPGQLHVSHSEDLTPTRY 180 Query 181 QELR 184 ELR Sbjct 181 GELR 184 >gi|126437138|ref|YP_001072829.1| hypothetical protein Mjls_4571 [Mycobacterium sp. JLS] gi|126236938|gb|ABO00339.1| conserved hypothetical protein [Mycobacterium sp. JLS] Length=187 Score = 228 bits (582), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 112/136 (83%), Positives = 119/136 (88%), Gaps = 0/136 (0%) Query 49 NPPLLFPAIYLADSAQACMVEVERAAQAASTTAEKMLEAAYRLHTIDVTDLAVLDLTTPQ 108 NP LF AIYLADS QACMVEVERAAQAASTT EKMLEA+YRLHTI+ TDLAVLDL T Sbjct 47 NPAGLFSAIYLADSTQACMVEVERAAQAASTTPEKMLEASYRLHTIEATDLAVLDLITSD 106 Query 109 AREAVGLENDDIYGDDWSGCQAVGHAAWFLHMQGVLVPAAGGVGLVVTAYEQRTRPGQLQ 168 AREAVGLE+DDIYGDDWS CQAVGHAAWFLH+QGVLVPAAGG+GLV+TAYEQRTRPGQL Sbjct 107 AREAVGLEDDDIYGDDWSACQAVGHAAWFLHVQGVLVPAAGGIGLVITAYEQRTRPGQLH 166 Query 169 LRQSVDLTPALYQELR 184 + S DLTP Y ELR Sbjct 167 VSHSEDLTPTRYGELR 182 >gi|108802399|ref|YP_642595.1| hypothetical protein Mmcs_5439 [Mycobacterium sp. MCS] gi|119855222|ref|YP_935825.1| hypothetical protein Mkms_5836 [Mycobacterium sp. KMS] gi|108772818|gb|ABG11539.1| hypothetical protein Mmcs_5439 [Mycobacterium sp. MCS] gi|119697939|gb|ABL95010.1| conserved hypothetical protein [Mycobacterium sp. KMS] Length=97 Score = 74.7 bits (182), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 35/49 (72%), Positives = 42/49 (86%), Gaps = 0/49 (0%) Query 138 LHMQGVLVPAAGGVGLVVTAYEQRTRPGQLQLRQSVDLTPALYQELRAT 186 LHMQG+LVPAAGGVGLV++AYEQRT GQL+L +S DLTPALY + R + Sbjct 49 LHMQGILVPAAGGVGLVISAYEQRTHLGQLRLTRSEDLTPALYTQCRCS 97 >gi|340030870|ref|ZP_08666933.1| hypothetical protein PaTRP_19294 [Paracoccus sp. TRP] Length=164 Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 36/94 (39%), Positives = 47/94 (50%), Gaps = 13/94 (13%) Query 33 RDALSGEGARRFGGRWNPPLLFPAIYLADSAQACMVEVERAAQAASTTAEKMLEAAYRLH 92 R+ LSGEGARRFGGR+NP PA+Y A S + E + TT AY+ Sbjct 17 REPLSGEGARRFGGRFNPKGA-PALYTALSIMTAIREANQIGNLQPTTL-----VAYK-- 68 Query 93 TIDVTDLA-VLDLTTPQAREAVGLENDDIYGDDW 125 D+A + D T P A + G+ D+ DDW Sbjct 69 ----ADVARIFDATDPAALDEYGIGPADLAADDW 98 >gi|299135817|ref|ZP_07029001.1| RES domain protein [Acidobacterium sp. MP5ACTX8] gi|298601941|gb|EFI58095.1| RES domain protein [Acidobacterium sp. MP5ACTX8] Length=216 Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust. Identities = 33/95 (35%), Positives = 48/95 (51%), Gaps = 8/95 (8%) Query 36 LSGEGARRFGGRWNPPLLFPAIYLADSAQACMVEVERAAQAASTTAEKMLEAAYR----L 91 LS GA GGR+N P +FP +Y ADS ++EVE A A++ L R + Sbjct 36 LSAIGAFERGGRFNAPRMFPVLYSADSQLTALLEVE----ALFLDAKERLRGVPRNPDLI 91 Query 92 HTIDVTDLAVLDLTTPQAREAVGLENDDIYGDDWS 126 T+D T L VLDLT +G ++++ + S Sbjct 92 LTLDCTLLRVLDLTVENLYADLGTSHEELISNTPS 126 >gi|311747907|ref|ZP_07721692.1| putative toxin-antitoxin system, toxin component [Algoriphagus sp. PR1] gi|311302724|gb|EAZ80211.2| putative toxin-antitoxin system, toxin component [Algoriphagus sp. PR1] Length=151 Score = 45.1 bits (105), Expect = 0.004, Method: Compositional matrix adjust. Identities = 21/44 (48%), Positives = 28/44 (64%), Gaps = 1/44 (2%) Query 26 YRYTGAHRDALSGEGARRFGGRWNPPLLFPAIYLADSAQACMVE 69 YR + LSGEGA+R+GGRWN + PAIY S +C++E Sbjct 4 YRIALTKYNDLSGEGAKRYGGRWN-KVGVPAIYAGSSISSCLLE 46 >gi|37522294|ref|NP_925671.1| hypothetical protein glr2725 [Gloeobacter violaceus PCC 7421] gi|35213294|dbj|BAC90666.1| glr2725 [Gloeobacter violaceus PCC 7421] Length=185 Score = 43.9 bits (102), Expect = 0.010, Method: Compositional matrix adjust. Identities = 46/154 (30%), Positives = 64/154 (42%), Gaps = 25/154 (16%) Query 16 RGTIEWSETCYRYTGAH--RDALSGEGARRFGGRWNPPLLFPAIYLADSAQACMVEVERA 73 R + + + C+R LSGEGA R GGRWNP + PA+YL++S E ++ Sbjct 14 RACLLYEKRCWRILAPRWAYQPLSGEGAARNGGRWNPKGV-PALYLSESIDTAFAEYQQT 72 Query 74 AQAASTTAEKMLEAAYRLHTIDVTDLA---------VLDLTTPQAREAVGLENDDIYGDD 124 T AYRL V DL V + T P A + L D Sbjct 73 LYVRPGTF-----CAYRLLVAGVVDLCDPTVLVELGVNEETLPCAWREIALIRKDT-PPT 126 Query 125 WSGCQAVGHAAWFLHMQGVLVPAA---GGVGLVV 155 W+ + A GV VP+A GG+ +V+ Sbjct 127 WTLASKLFAAG----ASGVRVPSAQFNGGINIVL 156 >gi|241113603|ref|YP_002973438.1| RES domain-containing protein [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240861811|gb|ACS59477.1| RES domain protein [Rhizobium leguminosarum bv. trifolii WSM1325] Length=168 Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust. Identities = 32/93 (35%), Positives = 41/93 (45%), Gaps = 9/93 (9%) Query 37 SGEGARRFGGRWNPPLLFPAIYLADSAQACM-VEVERAAQAASTTAEKMLEAAYRLHTID 95 SGEGA RFGGRWN + D A A + V V +A T A +M A D Sbjct 29 SGEGAYRFGGRWNSKGVRAVYCSLDPATAILEVAVHNGFRALDTVAHRMTAAV----IAD 84 Query 96 VTDLAVLD---LTTPQ-AREAVGLENDDIYGDD 124 D+ V+D + P R + I+GDD Sbjct 85 AGDIHVVDPGNVPNPNWLRPGIPSAGQQIFGDD 117 >gi|322832118|ref|YP_004212145.1| RES domain protein [Rahnella sp. Y9602] gi|321167319|gb|ADW73018.1| RES domain protein [Rahnella sp. Y9602] Length=152 Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust. Identities = 44/151 (30%), Positives = 68/151 (46%), Gaps = 23/151 (15%) Query 35 ALSGEGARRFGGRWNPPLLFPAIYLADSAQACMVEVERAAQAASTTAEKMLEAAYRLHTI 94 A SG GA+ +GGRWNPP P +Y+ S ++E+ Q ML +Y L +I Sbjct 15 AWSGAGAQLYGGRWNPP-GRPVVYVTTSISLAILEILVHLQ------NSMLMRSYTLLSI 67 Query 95 DVTD--LAVLDLTTPQA--REAVGLENDDIYGDDW-SGCQAVGHAAWFLHMQGVLVPAAG 149 +V + L L+++ A R A ++ GD W + + VG L + V+VP+ Sbjct 68 EVPEELLDTLEVSELAADWRSASVPDSTQRQGDVWLAEGEYVG-----LKVPSVIVPSEY 122 Query 150 GVGLVVTAYEQRTRPGQLQLRQSVDLTPALY 180 V L P L SV+ P ++ Sbjct 123 NVLL------NPLHPAFADLLSSVEREPMMF 147 >gi|153830315|ref|ZP_01982982.1| RES domain superfamily [Vibrio cholerae 623-39] gi|229526081|ref|ZP_04415485.1| hypothetical protein VCA_000189 [Vibrio cholerae bv. albensis VL426] gi|297580495|ref|ZP_06942422.1| conserved hypothetical protein [Vibrio cholerae RC385] gi|148874213|gb|EDL72348.1| RES domain superfamily [Vibrio cholerae 623-39] gi|229336239|gb|EEO01257.1| hypothetical protein VCA_000189 [Vibrio cholerae bv. albensis VL426] gi|297536141|gb|EFH74975.1| conserved hypothetical protein [Vibrio cholerae RC385] gi|341647093|gb|EGS71186.1| RES domain protein [Vibrio cholerae BJG-01] Length=156 Score = 39.3 bits (90), Expect = 0.24, Method: Compositional matrix adjust. Identities = 29/91 (32%), Positives = 42/91 (47%), Gaps = 18/91 (19%) Query 40 GARRFGGRWNPPLLFPAIYLADSAQACMVEVERAAQAASTTAEKMLEAAYRLHTIDVTDL 99 GA+ FGGRWN + A+Y A+S C++EV + L Y L+ IDV D Sbjct 20 GAKLFGGRWNSKGI-EALYFAESESLCVLEV-----FVHINNDPELIHKYDLYRIDVPDE 73 Query 100 AVLDLTTPQAREAVGLENDDIYGDDWSGCQA 130 + V LEN+D+ ++W A Sbjct 74 LI-----------VQLENEDL-PNNWRAIPA 92 >gi|153212488|ref|ZP_01948257.1| conserved hypothetical protein [Vibrio cholerae 1587] gi|124116525|gb|EAY35345.1| conserved hypothetical protein [Vibrio cholerae 1587] Length=156 Score = 39.3 bits (90), Expect = 0.25, Method: Compositional matrix adjust. Identities = 29/91 (32%), Positives = 42/91 (47%), Gaps = 18/91 (19%) Query 40 GARRFGGRWNPPLLFPAIYLADSAQACMVEVERAAQAASTTAEKMLEAAYRLHTIDVTDL 99 GA+ FGGRWN + A+Y A+S C++EV + L Y L+ IDV D Sbjct 20 GAKLFGGRWNSKGI-EALYFAESESLCVLEV-----FVHINNDPELIHKYDLYRIDVPDE 73 Query 100 AVLDLTTPQAREAVGLENDDIYGDDWSGCQA 130 + V LEN+D+ ++W A Sbjct 74 LI-----------VQLENEDL-PNNWRAIPA 92 >gi|254500064|ref|ZP_05112217.1| RES domain superfamily [Labrenzia alexandrii DFL-11] gi|222441531|gb|EEE48208.1| RES domain superfamily [Labrenzia alexandrii DFL-11] Length=165 Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust. Identities = 41/137 (30%), Positives = 58/137 (43%), Gaps = 12/137 (8%) Query 33 RDALSGEGARRFGGRWNPPLLFPAIYLADSAQACMVEVERAAQAASTTAEKMLEAAYRLH 92 R+ +SG GA +GGR+NP + PA+Y + S + E + TT YR Sbjct 18 REPMSGRGAALYGGRFNPKGV-PALYTSTSVLTALREANQVGDLQPTTL-----VCYRAE 71 Query 93 TIDVTDLAVLDLTTPQAREAVGLENDDIYGDDWSGCQAVGHAAWFLHMQGVLVPAAGGVG 152 I++ V D T A EAVGL + W A LV AG G Sbjct 72 -IEM----VFDTTDRAALEAVGLNEVALADPAWRDQMKTRGQARTQRFASDLV-TAGYNG 125 Query 153 LVVTAYEQRTRPGQLQL 169 L+V ++ + PG + L Sbjct 126 LLVRSFAKGAGPGDMNL 142 >gi|260909892|ref|ZP_05916581.1| conserved hypothetical protein [Prevotella sp. oral taxon 472 str. F0295] gi|260635996|gb|EEX53997.1| conserved hypothetical protein [Prevotella sp. oral taxon 472 str. F0295] Length=227 Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust. Identities = 31/102 (31%), Positives = 45/102 (45%), Gaps = 12/102 (11%) Query 57 IYLADSAQACMVEVERAAQAASTTAEKMLEAAYRLHTIDVTDLAVLDLTTPQAREAVGLE 116 IY A S + EV ++ Y LH LDLT P+ R+ +G+ Sbjct 131 IYAATSVETAFREVMH--YGVDMNRRVLVTRHYELHN-------ALDLTNPETRKLLGVT 181 Query 117 NDDIYGDDWSGCQAVGHAAWFLHMQGVLVPAA---GGVGLVV 155 +DI GD + +G A G++VP+A GGV +VV Sbjct 182 LEDITGDCYELTHKLGDFALQNGYDGLVVPSARNVGGVNIVV 223 >gi|148243882|ref|YP_001220121.1| hypothetical protein Acry_3368 [Acidiphilium cryptum JF-5] gi|146400445|gb|ABQ28979.1| conserved hypothetical protein [Acidiphilium cryptum JF-5] Length=173 Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust. Identities = 39/136 (29%), Positives = 52/136 (39%), Gaps = 12/136 (8%) Query 34 DALSGEGARRFGGRWNPPLLFPAIYLADSAQACMVEVERAAQAASTTAEKMLEAAYRLHT 93 D +SGEGAR +GGR+NP + PAIY + S + E +A TT L + Sbjct 21 DPMSGEGARLYGGRFNPRGV-PAIYCSISVMTALREANQAGALQPTT----------LVS 69 Query 94 IDVTDLAVLDLTTPQAREAVGLENDDIYGDDWSGCQAVGHAAWFLHMQGVLVPAAGGVGL 153 D V D A EA G + W G + L+ A L Sbjct 70 YDAEIERVFDARDVSAVEAEGFSPGTLASQTWRDEMKAGKQSQTQVFASRLI-AKNYCAL 128 Query 154 VVTAYEQRTRPGQLQL 169 +V +Y P L L Sbjct 129 LVPSYVAGATPSDLNL 144 >gi|158421488|ref|YP_001527715.1| RES domain-containing protein [Deinococcus geothermalis DSM 11300] gi|158342731|gb|ABW35017.1| RES domain protein [Deinococcus geothermalis DSM 11300] Length=200 Score = 38.9 bits (89), Expect = 0.33, Method: Compositional matrix adjust. Identities = 42/148 (29%), Positives = 63/148 (43%), Gaps = 21/148 (14%) Query 15 ARGTIEWSETCYRYTGAHRDALSGEGARRFGGRWNPPLLFPAIYLADSAQACMVEVERAA 74 A+ T+ + T +Y S EGA R+ P L A+Y+AD+ + E + Sbjct 18 AQDTVTYRVTHLKY---FETLTSSEGAYASDNRFTPKRLSYALYVADAPDLALREATQGY 74 Query 75 QAASTTAEKMLEAAYRLHTIDVTDLAVLDLTTPQAREAVGLENDDIYGDDWSGCQA---- 130 Q E A Y +H I VT +LDLT REA+ + + G DW A Sbjct 75 QDEFRAPEIPAHAFYPVH-IRVT--RILDLTDVAVREALDVGLMTLTG-DWKASLALQEQ 130 Query 131 ----------VGHAAWFLHMQGVLVPAA 148 +G AA+ L ++G+ P+A Sbjct 131 DPRHRVEMHEIGQAAFALGLEGIRYPSA 158 >gi|284037021|ref|YP_003386951.1| RES domain protein [Spirosoma linguale DSM 74] gi|283816314|gb|ADB38152.1| RES domain protein [Spirosoma linguale DSM 74] Length=176 Score = 38.9 bits (89), Expect = 0.33, Method: Compositional matrix adjust. Identities = 22/51 (44%), Positives = 27/51 (53%), Gaps = 3/51 (5%) Query 21 WSETCYRYTGAHR--DALSGEGARRFGGRWNPPLLFPAIYLADSAQACMVE 69 W T YR A + L+ EGAR FGGRWNP +P +Y S +VE Sbjct 18 WMLTVYRTVKAKYIDEPLATEGARLFGGRWNPK-GYPLLYTTSSPALALVE 67 >gi|294506051|ref|YP_003570109.1| hypothetical protein SRM_00236 [Salinibacter ruber M8] gi|294342379|emb|CBH23157.1| conserved hypothetical protein [Salinibacter ruber M8] Length=73 Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust. Identities = 21/49 (43%), Positives = 30/49 (62%), Gaps = 4/49 (8%) Query 21 WSETCYRYTGAHRDALSGEGARRFGGRWNPPLLFPAIYLADSAQACMVE 69 W +Y+G+ A SGEGAR++GGR+N P + P +Y A S +VE Sbjct 7 WRPVEEQYSGS---AFSGEGARQYGGRFNSPGI-PVVYTAGSLPLALVE 51 >gi|90421958|ref|YP_530328.1| hypothetical protein RPC_0434 [Rhodopseudomonas palustris BisB18] gi|90103972|gb|ABD86009.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB18] Length=189 Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust. Identities = 44/185 (24%), Positives = 74/185 (40%), Gaps = 8/185 (4%) Query 1 VSDALDEGLVQRIDARGTIEWSETCYRYTGAHRDALSGEGARRFGGRWNPPLLFPAIYLA 60 + + D L+ +D +S +R T RD L A + RW F +Y + Sbjct 5 IRKSRDVALLDALDGMPRHHFSGAVWRVTPQGRDPLL---AGKSQSRWCNGT-FDVLYTS 60 Query 61 DSAQACMVEVERAAQAASTTAEKMLEAAYRLHTIDVTDLAVLDLTTPQAREAVGLENDDI 120 + Q + E+ + K+ A HTI+ + L L A E +G+ + Sbjct 61 LTRQGALAEIFALYSSQPVFPSKIRSVA---HTIEASSGQTLRLVDLAALENLGVRTQNY 117 Query 121 YGDDWSGCQAVGHAAWFLHMQGVLVPAAGGVGLVVTAYEQRTRPGQLQLRQSVDLTPALY 180 ++ Q + AA+FL G+LVP+A G + + P L++ S D P + Sbjct 118 SEREYGRTQEIADAAYFLGFSGLLVPSARWHGENLVLFTDHIDPEGLRVVAS-DADPIDW 176 Query 181 QELRA 185 RA Sbjct 177 SAWRA 181 >gi|149191690|ref|ZP_01869932.1| hypothetical protein VSAK1_14712 [Vibrio shilonii AK1] gi|148834479|gb|EDL51474.1| hypothetical protein VSAK1_14712 [Vibrio shilonii AK1] Length=154 Score = 38.5 bits (88), Expect = 0.41, Method: Compositional matrix adjust. Identities = 25/64 (40%), Positives = 35/64 (55%), Gaps = 3/64 (4%) Query 36 LSGEGARRFGGRWNPPLLFPAIYLADSAQACMVEVERAAQAASTTAEKMLEAAYRLHTID 95 LS EGA R GGR+NP PA+YL+ + C+ EV A A++ + M +Y + Sbjct 11 LSTEGAARVGGRFNPK-GSPALYLSLKPETCIAEV--AGGASTRLLDPMTLCSYHIDING 67 Query 96 VTDL 99 V DL Sbjct 68 VLDL 71 >gi|37526260|ref|NP_929604.1| hypothetical protein plu2358 [Photorhabdus luminescens subsp. laumondii TTO1] gi|36785690|emb|CAE14651.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii TTO1] Length=156 Score = 38.5 bits (88), Expect = 0.42, Method: Compositional matrix adjust. Identities = 38/135 (29%), Positives = 60/135 (45%), Gaps = 34/135 (25%) Query 26 YRYTGAH--RDALSGEGARRFGGRWNPPLLFPAIYLADSAQACMVEVERAAQAASTTAEK 83 YR T + A SG GA+ +GGRW+ + PA+Y+A S ++EV Sbjct 4 YRLTRSKYVESAWSGTGAKLYGGRWH-NIGRPAVYVATSVSLAVLEV------------- 49 Query 84 MLEAAYRLHTID---VTDLAVLDLTTPQAREAVGLENDDIYGDDW-----SGCQAVGHAA 135 +H D +TD A+L + P+ + + + + D DW S C + Sbjct 50 ------LVHVGDDELLTDFALLSIDIPENQ--IDILDIDTLPSDWNAPVPSTCTMEIGSE 101 Query 136 WF--LHMQGVLVPAA 148 WF H G++VP+A Sbjct 102 WFEVSHSIGLVVPSA 116 >gi|341641912|gb|EGS66427.1| RES domain protein [Vibrio cholerae HE-09] Length=156 Score = 38.5 bits (88), Expect = 0.46, Method: Compositional matrix adjust. Identities = 28/91 (31%), Positives = 42/91 (47%), Gaps = 18/91 (19%) Query 40 GARRFGGRWNPPLLFPAIYLADSAQACMVEVERAAQAASTTAEKMLEAAYRLHTIDVTDL 99 GA+ FGGRWN + A+Y ++S C++EV + L Y L+ IDV D Sbjct 20 GAKLFGGRWNSKGI-EALYFSESESLCVLEV-----FVHINNDPELIHKYDLYRIDVPDE 73 Query 100 AVLDLTTPQAREAVGLENDDIYGDDWSGCQA 130 + V LEN+D+ ++W A Sbjct 74 LI-----------VQLENEDL-PNNWRAIPA 92 >gi|296533095|ref|ZP_06895731.1| RES domain protein [Roseomonas cervicalis ATCC 49957] gi|296266576|gb|EFH12565.1| RES domain protein [Roseomonas cervicalis ATCC 49957] Length=172 Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust. Identities = 31/87 (36%), Positives = 43/87 (50%), Gaps = 9/87 (10%) Query 34 DALSGEGARRFGGRWNPPLLFPAIYLADSAQACMVEVERAAQAASTTAEKMLEAAYRLHT 93 D LSG GA R+GGR+NP + A+Y + + E + Q + A+ + AYR Sbjct 18 DPLSGAGAARYGGRFNPRGM-AALYTSLRFETAWREAQ---QGFAFKAQPLTLCAYRAEC 73 Query 94 IDVTDLAVLDLTTPQAREAVGLENDDI 120 D VLDLT REA G+ D+ Sbjct 74 DD-----VLDLTDAATREAHGIRPADL 95 >gi|304394852|ref|ZP_07376738.1| putative toxin-antitoxin system, toxin component [Ahrensia sp. R2A130] gi|303293043|gb|EFL87457.1| putative toxin-antitoxin system, toxin component [Ahrensia sp. R2A130] Length=171 Score = 38.1 bits (87), Expect = 0.56, Method: Compositional matrix adjust. Identities = 26/73 (36%), Positives = 38/73 (53%), Gaps = 9/73 (12%) Query 33 RDALSGEGARRFGGRWNPPLLFPAIYLADSAQACMVEVERAAQAASTTAEKMLEAAYR-- 90 R+ LSGEGA +FGGR+N + PA+Y + + + E + T + + AYR Sbjct 26 REPLSGEGAAKFGGRFN-AMATPALYTSLAPDTAIREANQVG-----TLQPTVLVAYRAN 79 Query 91 -LHTIDVTDLAVL 102 +H D TD A L Sbjct 80 IVHVFDATDPASL 92 >gi|121592997|ref|YP_984893.1| hypothetical protein Ajs_0567 [Acidovorax sp. JS42] gi|120605077|gb|ABM40817.1| conserved hypothetical protein [Acidovorax sp. JS42] Length=158 Score = 37.7 bits (86), Expect = 0.70, Method: Compositional matrix adjust. Identities = 21/49 (43%), Positives = 30/49 (62%), Gaps = 3/49 (6%) Query 24 TCYRYTGAH--RDALSGEGARRFGGRWNPPLLFPAIYLADSAQACMVEV 70 T +R T A + A SGEGAR +GGRWNP + +Y A+S ++E+ Sbjct 3 TVWRITTARFAQTAFSGEGARLYGGRWNPK-GWEVVYTAESQSLGLLEL 50 >gi|45441926|ref|NP_993465.1| hypothetical protein YP_2133 [Yersinia pestis biovar Microtus str. 91001] gi|108807690|ref|YP_651606.1| hypothetical protein YPA_1695 [Yersinia pestis Antiqua] gi|108811968|ref|YP_647735.1| hypothetical protein YPN_1806 [Yersinia pestis Nepal516] 40 more sequence titles Length=152 Score = 37.7 bits (86), Expect = 0.74, Method: Compositional matrix adjust. Identities = 27/74 (37%), Positives = 39/74 (53%), Gaps = 8/74 (10%) Query 35 ALSGEGARRFGGRWNPPLLFPAIYLADSAQACMVEVERAAQAASTTAEKMLEAAYRLHTI 94 A +G GA +GGRWN AIYLA S M+E Q +ST +E + L I Sbjct 15 AWTGYGAEIYGGRWNHK-GHAAIYLASSISLAMLETLAHIQDSSTLSE------FELFQI 67 Query 95 DVTDLAVLDLTTPQ 108 +++D +++ L PQ Sbjct 68 EISDSSIM-LLQPQ 80 >gi|294503641|ref|YP_003567703.1| hypothetical protein YPZ3_1531 [Yersinia pestis Z176003] gi|262361685|gb|ACY58406.1| hypothetical protein YPD4_1498 [Yersinia pestis D106004] gi|262365576|gb|ACY62133.1| hypothetical protein YPD8_1448 [Yersinia pestis D182038] gi|294354100|gb|ADE64441.1| hypothetical protein YPZ3_1531 [Yersinia pestis Z176003] Length=145 Score = 37.7 bits (86), Expect = 0.74, Method: Compositional matrix adjust. Identities = 27/74 (37%), Positives = 39/74 (53%), Gaps = 8/74 (10%) Query 35 ALSGEGARRFGGRWNPPLLFPAIYLADSAQACMVEVERAAQAASTTAEKMLEAAYRLHTI 94 A +G GA +GGRWN AIYLA S M+E Q +ST +E + L I Sbjct 8 AWTGYGAEIYGGRWNHK-GHAAIYLASSISLAMLETLAHIQDSSTLSE------FELFQI 60 Query 95 DVTDLAVLDLTTPQ 108 +++D +++ L PQ Sbjct 61 EISDSSIM-LLQPQ 73 >gi|51596588|ref|YP_070779.1| hypothetical protein YPTB2264 [Yersinia pseudotuberculosis IP 32953] gi|170024139|ref|YP_001720644.1| RES domain-containing protein [Yersinia pseudotuberculosis YPIII] gi|186895647|ref|YP_001872759.1| RES domain-containing protein [Yersinia pseudotuberculosis PB1/+] gi|51589870|emb|CAH21502.1| conserved hypothetical protein [Yersinia pseudotuberculosis IP 32953] gi|169750673|gb|ACA68191.1| RES domain protein [Yersinia pseudotuberculosis YPIII] gi|186698673|gb|ACC89302.1| RES domain protein [Yersinia pseudotuberculosis PB1/+] Length=152 Score = 37.7 bits (86), Expect = 0.74, Method: Compositional matrix adjust. Identities = 27/74 (37%), Positives = 39/74 (53%), Gaps = 8/74 (10%) Query 35 ALSGEGARRFGGRWNPPLLFPAIYLADSAQACMVEVERAAQAASTTAEKMLEAAYRLHTI 94 A +G GA +GGRWN AIYLA S M+E Q +ST +E + L I Sbjct 15 AWTGYGAEIYGGRWNHK-GHAAIYLASSISLAMLETLAHIQDSSTLSE------FELFQI 67 Query 95 DVTDLAVLDLTTPQ 108 +++D +++ L PQ Sbjct 68 EISDSSIM-LLQPQ 80 >gi|268589597|ref|ZP_06123818.1| putative toxin-antitoxin system, toxin component [Providencia rettgeri DSM 1131] gi|291315071|gb|EFE55524.1| putative toxin-antitoxin system, toxin component [Providencia rettgeri DSM 1131] Length=152 Score = 37.4 bits (85), Expect = 0.92, Method: Compositional matrix adjust. Identities = 25/82 (31%), Positives = 41/82 (50%), Gaps = 9/82 (10%) Query 26 YRYTGAH--RDALSGEGARRFGGRWNPPLLFPAIYLADSAQACMVEVERAAQAASTTAEK 83 YR ++ DA SG+GA +GGRWN PA+Y + S +E+ + Sbjct 4 YRLVKSNFAHDAWSGQGAMLYGGRWNHKGT-PAVYTSTSISLATLEILVHIN------QD 56 Query 84 MLEAAYRLHTIDVTDLAVLDLT 105 +L + + L +ID+ D V+ L+ Sbjct 57 ILLSQFSLLSIDINDKYVMKLS 78 >gi|16264455|ref|NP_437247.1| hypothetical protein SM_b21128 [Sinorhizobium meliloti 1021] gi|15140592|emb|CAC49107.1| conserved hypothetical membrane-anchored protein [Sinorhizobium meliloti 1021] Length=184 Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust. Identities = 29/68 (43%), Positives = 35/68 (52%), Gaps = 5/68 (7%) Query 36 LSGEGARRFGGRWNPPLLFPAIYLADSAQACMVEVERA-AQAASTTAEKMLEAAYRLHTI 94 LSG GA RFGGRWN P+ PAIY A E + Q + + L A RL Sbjct 37 LSGAGAARFGGRWN-PIGMPAIYAARELSTAWAEYNQGFVQHPALIVQLELRGA-RL--A 92 Query 95 DVTDLAVL 102 D+TD +VL Sbjct 93 DLTDASVL 100 >gi|336037787|gb|AEH83717.1| conserved hypothetical membrane-anchored protein [Sinorhizobium meliloti SM11] Length=184 Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust. Identities = 29/68 (43%), Positives = 35/68 (52%), Gaps = 5/68 (7%) Query 36 LSGEGARRFGGRWNPPLLFPAIYLADSAQACMVEVERA-AQAASTTAEKMLEAAYRLHTI 94 LSG GA RFGGRWN P+ PAIY A E + Q + + L A RL Sbjct 37 LSGAGAARFGGRWN-PIGMPAIYAARELSTAWAEYNQGFVQHPALIVQLELRGA-RL--A 92 Query 95 DVTDLAVL 102 D+TD +VL Sbjct 93 DLTDASVL 100 >gi|333815593|gb|AEG08260.1| RES domain protein [Sinorhizobium meliloti BL225C] Length=184 Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust. Identities = 27/68 (40%), Positives = 33/68 (49%), Gaps = 5/68 (7%) Query 36 LSGEGARRFGGRWNPPLLFPAIYLADSAQACMVEVERA-AQAASTTAEKMLEAAYRLHTI 94 LSG GA RFGGRWN P+ PAIY A E + Q + + L A Sbjct 37 LSGAGAARFGGRWN-PIGMPAIYAARELSTAWAEYNQGFVQHPALIVQLELRGA---RLA 92 Query 95 DVTDLAVL 102 D+TD +VL Sbjct 93 DLTDASVL 100 >gi|253989642|ref|YP_003040998.1| hypothetical protein PAU_02162 [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253781092|emb|CAQ84254.1| conserved hypothetical protein [Photorhabdus asymbiotica] Length=159 Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust. Identities = 36/132 (28%), Positives = 57/132 (44%), Gaps = 28/132 (21%) Query 26 YRYTGAH--RDALSGEGARRFGGRWNPPLLFPAIYLADSAQACMVEVERAAQAASTTAEK 83 YR T + A SG GA+ +GGRW+ + PA+Y+A S ++EV + Sbjct 4 YRLTRSKYVESAWSGTGAKLYGGRWH-NIGRPAVYVATSISLAVLEV------LVHVGDD 56 Query 84 MLEAAYRLHTIDVTDLAVLDLTTPQAREAVGLENDDIYGDDWS-----GCQAVGHAAWF- 137 L A + L +ID+ + + + N D DW+ C + WF Sbjct 57 ELLADFSLLSIDIPE------------NQIDILNLDTLPPDWNDPIPPACTMEIGSEWFE 104 Query 138 -LHMQGVLVPAA 148 H G++VP+A Sbjct 105 VSHSIGLMVPSA 116 >gi|255036737|ref|YP_003087358.1| RES domain-containing protein [Dyadobacter fermentans DSM 18053] gi|254949493|gb|ACT94193.1| RES domain protein [Dyadobacter fermentans DSM 18053] Length=151 Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust. Identities = 18/34 (53%), Positives = 22/34 (65%), Gaps = 1/34 (2%) Query 36 LSGEGARRFGGRWNPPLLFPAIYLADSAQACMVE 69 L GEGAR GGRWN PL P IY ++S ++E Sbjct 15 LDGEGARLHGGRWNHPLT-PCIYTSESRALALLE 47 >gi|333983662|ref|YP_004512872.1| RES domain-containing protein [Methylomonas methanica MC09] gi|333807703|gb|AEG00373.1| RES domain protein [Methylomonas methanica MC09] Length=161 Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust. Identities = 25/67 (38%), Positives = 33/67 (50%), Gaps = 6/67 (8%) Query 34 DALSGEGARRFGGRWNPPLLFPAIYLA-DSAQACMVEVERAAQAASTTAEKMLEAAYRLH 92 D LSG GA++ GGR+NPP A+YL+ D A M A Q + M AY + Sbjct 5 DPLSGNGAKKHGGRFNPPGCT-ALYLSLDPTTAWM----EAQQGFPFKPQPMTLVAYEID 59 Query 93 TIDVTDL 99 + DL Sbjct 60 CAKIADL 66 >gi|126665151|ref|ZP_01736134.1| hypothetical protein MELB17_18824 [Marinobacter sp. ELB17] gi|126630521|gb|EBA01136.1| hypothetical protein MELB17_18824 [Marinobacter sp. ELB17] Length=159 Score = 36.6 bits (83), Expect = 1.6, Method: Compositional matrix adjust. Identities = 38/142 (27%), Positives = 62/142 (44%), Gaps = 23/142 (16%) Query 22 SETCYRYTGAHR-----DALSGEGARRFGGRWNPPLLFPAIYLADSAQACMVEVERAAQA 76 S T +R + H + LSGEGA +GGRWN P +YL+++ E+ A Sbjct 3 SITLWRMSAPHHAKTIAEMLSGEGAVMYGGRWNSPGNR-VVYLSETLSLAAFEI--LVHA 59 Query 77 ASTTAEKMLEAAYRLHTIDVTDLAVL----DLTTPQAREAVGLENDDIYGDDWSGC-QAV 131 AST + Y+ ++V + ++ ++ P +E I GDDW Q++ Sbjct 60 ASTA----ILQPYQFLKVEVPEDLIMALDDNVLPPDWKEPFNYALQAI-GDDWIASDQSL 114 Query 132 GHAAWFLHMQGVLVPAAGGVGL 153 G L + ++P V L Sbjct 115 G-----LSLPSAVIPGERNVIL 131 >gi|336171414|ref|YP_004578552.1| RES domain-containing protein [Lacinutrix sp. 5H-3-7-4] gi|334725986|gb|AEH00124.1| RES domain protein [Lacinutrix sp. 5H-3-7-4] Length=156 Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust. Identities = 16/35 (46%), Positives = 23/35 (66%), Gaps = 1/35 (2%) Query 36 LSGEGARRFGGRWNPPLLFPAIYLADSAQACMVEV 70 LSGEG+R +GGRWN + +Y +DS ++EV Sbjct 15 LSGEGSRLYGGRWNKKGM-AMLYFSDSLSTSLLEV 48 >gi|251779438|ref|ZP_04822358.1| hypothetical protein CLO_0561 [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243083753|gb|EES49643.1| hypothetical protein CLO_0561 [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length=224 Score = 36.2 bits (82), Expect = 2.1, Method: Compositional matrix adjust. Identities = 12/23 (53%), Positives = 16/23 (70%), Gaps = 0/23 (0%) Query 115 LENDDIYGDDWSGCQAVGHAAWF 137 L N+DIY D+W GC G+ +WF Sbjct 35 LINNDIYDDNWYGCYMYGNTSWF 57 >gi|123442377|ref|YP_001006356.1| hypothetical protein YE2116 [Yersinia enterocolitica subsp. enterocolitica 8081] gi|10719750|gb|AAG22119.1| hypothetical protein [Yersinia enterocolitica] gi|122089338|emb|CAL12186.1| conserved hypothetical protein [Yersinia enterocolitica subsp. enterocolitica 8081] Length=152 Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust. Identities = 26/72 (37%), Positives = 36/72 (50%), Gaps = 8/72 (11%) Query 37 SGEGARRFGGRWNPPLLFPAIYLADSAQACMVEVERAAQAASTTAEKMLEAAYRLHTIDV 96 +G GA +GGRWN AIYLA S M+E Q +ST +E + L I++ Sbjct 17 TGYGAETYGGRWNHK-GHAAIYLASSVSLAMLETLVHIQDSSTLSE------FELFQIEI 69 Query 97 TDLAVLDLTTPQ 108 D ++ L PQ Sbjct 70 EDSNIM-LLQPQ 80 >gi|345135582|dbj|BAK65191.1| hypothetical protein SLG_05160 [Sphingobium sp. SYK-6] Length=145 Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust. Identities = 29/83 (35%), Positives = 40/83 (49%), Gaps = 5/83 (6%) Query 26 YRYTGAHRDALSGEGARRFGGRWNPPLLFPAIYLADSAQACMVEVERAAQAASTTAEKML 85 +R A AL GEGAR +GGRWN P +Y A S ++EV ST +L Sbjct 4 HRLCKAAHVALDGEGARLWGGRWN-SAGRPMVYTAASPGLAVLEVLVHLDLPST----LL 58 Query 86 EAAYRLHTIDVTDLAVLDLTTPQ 108 Y+L I++ D A + P+ Sbjct 59 PDDYQLLAIEIPDDAPVHRIEPR 81 >gi|333894951|ref|YP_004468826.1| RES domain-containing protein [Alteromonas sp. SN2] gi|332994969|gb|AEF05024.1| RES domain-containing protein [Alteromonas sp. SN2] Length=154 Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust. Identities = 34/98 (35%), Positives = 42/98 (43%), Gaps = 9/98 (9%) Query 35 ALSGEGARRFGGRWNPPLLFPAIYLADSAQACMVEVERAAQAASTTAEKMLEAAYRLHTI 94 A GEGA R GGRWN IY A S ++EV + LE YRL + Sbjct 18 AFDGEGALRHGGRWNSAGR-ACIYTASSESLAVLEV-----LVHLEDDDCLE-HYRLFRL 70 Query 95 DVTDLAVLDLTT--PQAREAVGLENDDIYGDDWSGCQA 130 V + VL+L+T RE + GD W QA Sbjct 71 SVDESKVLNLSTLPDNWREYPAPKETSNIGDQWLASQA 108 >gi|334320904|ref|YP_004557533.1| RES domain-containing protein [Sinorhizobium meliloti AK83] gi|334098643|gb|AEG56653.1| RES domain protein [Sinorhizobium meliloti AK83] Length=184 Score = 35.8 bits (81), Expect = 2.6, Method: Compositional matrix adjust. Identities = 18/25 (72%), Positives = 19/25 (76%), Gaps = 1/25 (4%) Query 36 LSGEGARRFGGRWNPPLLFPAIYLA 60 LSG GA RFGGRWN P+ PAIY A Sbjct 37 LSGAGAARFGGRWN-PIGVPAIYAA 60 >gi|238792255|ref|ZP_04635890.1| RES domain protein [Yersinia intermedia ATCC 29909] gi|238728492|gb|EEQ20011.1| RES domain protein [Yersinia intermedia ATCC 29909] Length=152 Score = 35.8 bits (81), Expect = 2.8, Method: Compositional matrix adjust. Identities = 26/72 (37%), Positives = 36/72 (50%), Gaps = 8/72 (11%) Query 37 SGEGARRFGGRWNPPLLFPAIYLADSAQACMVEVERAAQAASTTAEKMLEAAYRLHTIDV 96 +G GA +GGRWN AIYLA S M+E Q +ST +E + L I++ Sbjct 17 TGYGAEIYGGRWNHK-GHAAIYLASSVSLAMLETLVHIQDSSTLSE------FELFQIEI 69 Query 97 TDLAVLDLTTPQ 108 D ++ L PQ Sbjct 70 DDSNIM-LLQPQ 80 >gi|238787180|ref|ZP_04630980.1| RES domain protein [Yersinia frederiksenii ATCC 33641] gi|238724968|gb|EEQ16608.1| RES domain protein [Yersinia frederiksenii ATCC 33641] Length=152 Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust. Identities = 30/85 (36%), Positives = 40/85 (48%), Gaps = 10/85 (11%) Query 26 YRYTGAHRDA--LSGEGARRFGGRWNPPLLFPAIYLADSAQACMVEVERAAQAASTTAEK 83 YR H A +G GA +GGRWN AIYLA S M+E Q +ST +E Sbjct 4 YRIVMRHYLASTWTGYGAEIYGGRWNHK-GHAAIYLASSVSLAMLEALVHIQDSSTLSE- 61 Query 84 MLEAAYRLHTIDVTDLAVLDLTTPQ 108 + L I++ D ++ L PQ Sbjct 62 -----FELFQIEIDDNNIM-LLQPQ 80 >gi|197122497|ref|YP_002134448.1| RES domain-containing protein [Anaeromyxobacter sp. K] gi|196172346|gb|ACG73319.1| RES domain protein [Anaeromyxobacter sp. K] Length=157 Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust. Identities = 16/29 (56%), Positives = 18/29 (63%), Gaps = 0/29 (0%) Query 21 WSETCYRYTGAHRDALSGEGARRFGGRWN 49 W T R+ R A SGEGAR +GGRWN Sbjct 4 WRITFARHAPDGRRAFSGEGARLYGGRWN 32 >gi|332161698|ref|YP_004298275.1| hypothetical protein YE105_C2076 [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|325665928|gb|ADZ42572.1| hypothetical protein YE105_C2076 [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330861084|emb|CBX71352.1| hypothetical protein YEW_CB08840 [Yersinia enterocolitica W22703] Length=152 Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust. Identities = 26/72 (37%), Positives = 36/72 (50%), Gaps = 8/72 (11%) Query 37 SGEGARRFGGRWNPPLLFPAIYLADSAQACMVEVERAAQAASTTAEKMLEAAYRLHTIDV 96 +G GA +GGRWN AIYLA S M+E Q +ST +E + L I++ Sbjct 17 TGYGAEIYGGRWNHK-GHAAIYLASSVSLAMLETLVHIQDSSTLSE------FELFQIEI 69 Query 97 TDLAVLDLTTPQ 108 D ++ L PQ Sbjct 70 EDSNIM-LLQPQ 80 >gi|238762536|ref|ZP_04623506.1| RES domain protein [Yersinia kristensenii ATCC 33638] gi|238699181|gb|EEP91928.1| RES domain protein [Yersinia kristensenii ATCC 33638] Length=152 Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust. Identities = 27/72 (38%), Positives = 35/72 (49%), Gaps = 8/72 (11%) Query 37 SGEGARRFGGRWNPPLLFPAIYLADSAQACMVEVERAAQAASTTAEKMLEAAYRLHTIDV 96 +G GA +GGRWN AIYLA S M+E Q +ST E + L I++ Sbjct 17 TGYGAEIYGGRWNHK-GHAAIYLASSVSLAMLETLVHIQDSSTLGE------FELFQIEI 69 Query 97 TDLAVLDLTTPQ 108 D +L L PQ Sbjct 70 EDNHIL-LLQPQ 80 >gi|238749387|ref|ZP_04610892.1| RES domain protein [Yersinia rohdei ATCC 43380] gi|238712042|gb|EEQ04255.1| RES domain protein [Yersinia rohdei ATCC 43380] Length=152 Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust. Identities = 24/68 (36%), Positives = 34/68 (50%), Gaps = 7/68 (10%) Query 37 SGEGARRFGGRWNPPLLFPAIYLADSAQACMVEVERAAQAASTTAEKMLEAAYRLHTIDV 96 +G GA +GGRWN AIYLA S M+E Q +ST +E + L I++ Sbjct 17 TGYGAEIYGGRWNHK-GHAAIYLASSVSLAMLETLVHIQDSSTLSE------FELFQIEI 69 Query 97 TDLAVLDL 104 D ++ L Sbjct 70 DDSNIMQL 77 Lambda K H 0.319 0.133 0.404 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 177363380150 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40