BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv1995
Length=255
Score E
Sequences producing significant alignments: (Bits) Value
gi|15609132|ref|NP_216511.1| hypothetical protein Rv1995 [Mycoba... 514 4e-144
gi|254364814|ref|ZP_04980860.1| hypothetical protein TBHG_01953 ... 511 4e-143
gi|289750577|ref|ZP_06509955.1| hypothetical protein TBDG_00787 ... 495 2e-138
gi|308376880|ref|ZP_07440386.2| hypothetical protein TMHG_01176 ... 492 2e-137
gi|326903608|gb|EGE50541.1| hypothetical protein TBPG_01484 [Myc... 490 7e-137
gi|183982970|ref|YP_001851261.1| hypothetical protein MMAR_2968 ... 311 6e-83
gi|118617754|ref|YP_906086.1| hypothetical protein MUL_2223 [Myc... 291 5e-77
gi|282889686|ref|ZP_06298225.1| hypothetical protein pah_c004o02... 207 1e-51
gi|270158658|ref|ZP_06187315.1| conserved hypothetical protein [... 199 4e-49
gi|162450141|ref|YP_001612508.1| hypothetical protein sce1870 [S... 183 2e-44
gi|146341547|ref|YP_001206595.1| hypothetical protein BRADO4645 ... 181 1e-43
gi|160879601|ref|YP_001558569.1| hypothetical protein Cphy_1456 ... 176 4e-42
gi|332703755|ref|ZP_08423843.1| Hemerythrin HHE cation binding d... 162 5e-38
gi|94968351|ref|YP_590399.1| hypothetical protein Acid345_1323 [... 160 2e-37
gi|220923041|ref|YP_002498343.1| Hemerythrin HHE cation binding ... 148 9e-34
gi|282164998|ref|YP_003357383.1| hypothetical protein MCP_2328 [... 142 4e-32
gi|116749945|ref|YP_846632.1| hemerythrin HHE cation binding dom... 134 1e-29
gi|73541331|ref|YP_295851.1| hypothetical protein Reut_A1641 [Ra... 130 1e-28
gi|282165624|ref|YP_003358009.1| hypothetical protein MCP_2954 [... 114 1e-23
gi|147919528|ref|YP_686732.1| hemerythrin-like protein [uncultur... 103 2e-20
gi|147921436|ref|YP_684749.1| hypothetical protein LRC475 [uncul... 83.2 3e-14
gi|77917922|ref|YP_355737.1| hypothetical protein Pcar_0307 [Pel... 62.0 8e-08
gi|85860340|ref|YP_462542.1| cytoplasmic protein [Syntrophus aci... 60.1 3e-07
gi|256828988|ref|YP_003157716.1| Hemerythrin HHE cation binding ... 55.8 7e-06
gi|73671097|ref|YP_307112.1| hypothetical protein Mbar_A3669 [Me... 55.5 8e-06
gi|291458188|ref|ZP_06597578.1| putative hemerythrin HHE cation ... 54.7 1e-05
gi|300088565|ref|YP_003759087.1| hemerythrin hhE cation-binding ... 54.3 1e-05
gi|116750360|ref|YP_847047.1| hemerythrin HHE cation binding dom... 53.1 3e-05
gi|227872893|ref|ZP_03991198.1| hemerythrin HHE cation binding d... 53.1 4e-05
gi|337287945|ref|YP_004627417.1| Hemerythrin HHE cation binding ... 53.1 4e-05
gi|313204560|ref|YP_004043217.1| hemerythrin hhe cation binding ... 50.4 2e-04
gi|78044507|ref|YP_359443.1| hypothetical protein CHY_0587 [Carb... 50.1 3e-04
gi|150016719|ref|YP_001308973.1| hemerythrin HHE cation binding ... 50.1 3e-04
gi|153006000|ref|YP_001380325.1| hemerythrin HHE cation binding ... 49.3 6e-04
gi|158520777|ref|YP_001528647.1| hemerythrin HHE cation binding ... 48.9 7e-04
gi|153005288|ref|YP_001379613.1| hemerythrin HHE cation binding ... 48.9 8e-04
gi|18313512|ref|NP_560179.1| hypothetical protein PAE2680 [Pyrob... 48.1 0.001
gi|335045378|ref|ZP_08538401.1| hemerythrin HHE cation binding d... 48.1 0.001
gi|91772325|ref|YP_565017.1| hemerythrin HHE cation binding prot... 47.8 0.002
gi|224367197|ref|YP_002601360.1| putative fusion protein with he... 47.0 0.003
gi|330826403|ref|YP_004389706.1| UspA domain-containing protein ... 46.6 0.003
gi|284175675|ref|ZP_06389644.1| Hemerythrin HHE cation binding d... 46.6 0.004
gi|303242386|ref|ZP_07328870.1| Hemerythrin HHE cation binding d... 46.2 0.004
gi|229578726|ref|YP_002837124.1| Hemerythrin HHE cation binding ... 46.2 0.004
gi|229582516|ref|YP_002840915.1| Hemerythrin HHE cation binding ... 46.2 0.004
gi|145590750|ref|YP_001152752.1| hemerythrin HHE cation binding ... 46.2 0.005
gi|227829789|ref|YP_002831568.1| Hemerythrin HHE cation binding ... 46.2 0.005
gi|320353561|ref|YP_004194900.1| Hemerythrin HHE cation-binding ... 46.2 0.005
gi|301059790|ref|ZP_07200684.1| hemerythrin HHE cation binding d... 45.4 0.007
gi|71906006|ref|YP_283593.1| ABC transporter [Dechloromonas arom... 45.4 0.008
>gi|15609132|ref|NP_216511.1| hypothetical protein Rv1995 [Mycobacterium tuberculosis H37Rv]
gi|15841477|ref|NP_336514.1| hypothetical protein MT2051 [Mycobacterium tuberculosis CDC1551]
gi|31793175|ref|NP_855668.1| hypothetical protein Mb2018 [Mycobacterium bovis AF2122/97]
62 more sequence titles
Length=255
Score = 514 bits (1324), Expect = 4e-144, Method: Compositional matrix adjust.
Identities = 254/255 (99%), Positives = 255/255 (100%), Gaps = 0/255 (0%)
Query 1 VVASGAATKGVTVMKQTPPAAVGRRHLLEISASAAGVIALSACSGSPPEPGKGRPDTTPE 60
+VASGAATKGVTVMKQTPPAAVGRRHLLEISASAAGVIALSACSGSPPEPGKGRPDTTPE
Sbjct 1 MVASGAATKGVTVMKQTPPAAVGRRHLLEISASAAGVIALSACSGSPPEPGKGRPDTTPE 60
Query 61 QEVPVTAPEDLMREHGVLKRILLIYREGIRRLQADDQSPAPALNESAQIIRRFIEDYHGQ 120
QEVPVTAPEDLMREHGVLKRILLIYREGIRRLQADDQSPAPALNESAQIIRRFIEDYHGQ
Sbjct 61 QEVPVTAPEDLMREHGVLKRILLIYREGIRRLQADDQSPAPALNESAQIIRRFIEDYHGQ 120
Query 121 LEEQYVFPKLEQAGKLTDITSVLRTQHQRGRVLTDRVLAATTAAAAFDQPARDTLAQDMA 180
LEEQYVFPKLEQAGKLTDITSVLRTQHQRGRVLTDRVLAATTAAAAFDQPARDTLAQDMA
Sbjct 121 LEEQYVFPKLEQAGKLTDITSVLRTQHQRGRVLTDRVLAATTAAAAFDQPARDTLAQDMA 180
Query 181 AYIRMFEPHEAREDTVVFPALRDVMSAVEFRDMAETFEDEEHRRFGEAGFQSVVDKVADI 240
AYIRMFEPHEAREDTVVFPALRDVMSAVEFRDMAETFEDEEHRRFGEAGFQSVVDKVADI
Sbjct 181 AYIRMFEPHEAREDTVVFPALRDVMSAVEFRDMAETFEDEEHRRFGEAGFQSVVDKVADI 240
Query 241 EKSLGIYDLSQFTPS 255
EKSLGIYDLSQFTPS
Sbjct 241 EKSLGIYDLSQFTPS 255
>gi|254364814|ref|ZP_04980860.1| hypothetical protein TBHG_01953 [Mycobacterium tuberculosis str.
Haarlem]
gi|134150328|gb|EBA42373.1| hypothetical protein TBHG_01953 [Mycobacterium tuberculosis str.
Haarlem]
Length=255
Score = 511 bits (1315), Expect = 4e-143, Method: Compositional matrix adjust.
Identities = 253/255 (99%), Positives = 254/255 (99%), Gaps = 0/255 (0%)
Query 1 VVASGAATKGVTVMKQTPPAAVGRRHLLEISASAAGVIALSACSGSPPEPGKGRPDTTPE 60
+VASGAATKGVTVMKQTPPAAVGRRHLLEISASAAGVIALSACSGSPPEPGKGRPDTTPE
Sbjct 1 MVASGAATKGVTVMKQTPPAAVGRRHLLEISASAAGVIALSACSGSPPEPGKGRPDTTPE 60
Query 61 QEVPVTAPEDLMREHGVLKRILLIYREGIRRLQADDQSPAPALNESAQIIRRFIEDYHGQ 120
QEVPVTAPEDLMREHGVLKRILLIYREGIRRLQADDQSPAPALNESAQIIRRFIEDYHGQ
Sbjct 61 QEVPVTAPEDLMREHGVLKRILLIYREGIRRLQADDQSPAPALNESAQIIRRFIEDYHGQ 120
Query 121 LEEQYVFPKLEQAGKLTDITSVLRTQHQRGRVLTDRVLAATTAAAAFDQPARDTLAQDMA 180
LEEQYVFPKLEQAGKLTDITSVLRTQHQRGRVLTDRV AATTAAAAFDQPARDTLAQDMA
Sbjct 121 LEEQYVFPKLEQAGKLTDITSVLRTQHQRGRVLTDRVPAATTAAAAFDQPARDTLAQDMA 180
Query 181 AYIRMFEPHEAREDTVVFPALRDVMSAVEFRDMAETFEDEEHRRFGEAGFQSVVDKVADI 240
AYIRMFEPHEAREDTVVFPALRDVMSAVEFRDMAETFEDEEHRRFGEAGFQSVVDKVADI
Sbjct 181 AYIRMFEPHEAREDTVVFPALRDVMSAVEFRDMAETFEDEEHRRFGEAGFQSVVDKVADI 240
Query 241 EKSLGIYDLSQFTPS 255
EKSLGIYDLSQFTPS
Sbjct 241 EKSLGIYDLSQFTPS 255
>gi|289750577|ref|ZP_06509955.1| hypothetical protein TBDG_00787 [Mycobacterium tuberculosis T92]
gi|308375742|ref|ZP_07444960.2| hypothetical protein TMGG_00544 [Mycobacterium tuberculosis SUMu007]
gi|289691164|gb|EFD58593.1| hypothetical protein TBDG_00787 [Mycobacterium tuberculosis T92]
gi|308345310|gb|EFP34161.1| hypothetical protein TMGG_00544 [Mycobacterium tuberculosis SUMu007]
Length=245
Score = 495 bits (1275), Expect = 2e-138, Method: Compositional matrix adjust.
Identities = 244/245 (99%), Positives = 245/245 (100%), Gaps = 0/245 (0%)
Query 11 VTVMKQTPPAAVGRRHLLEISASAAGVIALSACSGSPPEPGKGRPDTTPEQEVPVTAPED 70
+TVMKQTPPAAVGRRHLLEISASAAGVIALSACSGSPPEPGKGRPDTTPEQEVPVTAPED
Sbjct 1 MTVMKQTPPAAVGRRHLLEISASAAGVIALSACSGSPPEPGKGRPDTTPEQEVPVTAPED 60
Query 71 LMREHGVLKRILLIYREGIRRLQADDQSPAPALNESAQIIRRFIEDYHGQLEEQYVFPKL 130
LMREHGVLKRILLIYREGIRRLQADDQSPAPALNESAQIIRRFIEDYHGQLEEQYVFPKL
Sbjct 61 LMREHGVLKRILLIYREGIRRLQADDQSPAPALNESAQIIRRFIEDYHGQLEEQYVFPKL 120
Query 131 EQAGKLTDITSVLRTQHQRGRVLTDRVLAATTAAAAFDQPARDTLAQDMAAYIRMFEPHE 190
EQAGKLTDITSVLRTQHQRGRVLTDRVLAATTAAAAFDQPARDTLAQDMAAYIRMFEPHE
Sbjct 121 EQAGKLTDITSVLRTQHQRGRVLTDRVLAATTAAAAFDQPARDTLAQDMAAYIRMFEPHE 180
Query 191 AREDTVVFPALRDVMSAVEFRDMAETFEDEEHRRFGEAGFQSVVDKVADIEKSLGIYDLS 250
AREDTVVFPALRDVMSAVEFRDMAETFEDEEHRRFGEAGFQSVVDKVADIEKSLGIYDLS
Sbjct 181 AREDTVVFPALRDVMSAVEFRDMAETFEDEEHRRFGEAGFQSVVDKVADIEKSLGIYDLS 240
Query 251 QFTPS 255
QFTPS
Sbjct 241 QFTPS 245
>gi|308376880|ref|ZP_07440386.2| hypothetical protein TMHG_01176 [Mycobacterium tuberculosis SUMu008]
gi|308379091|ref|ZP_07485002.2| hypothetical protein TMJG_00248 [Mycobacterium tuberculosis SUMu010]
gi|308380241|ref|ZP_07489220.2| hypothetical protein TMKG_00250 [Mycobacterium tuberculosis SUMu011]
gi|308349612|gb|EFP38463.1| hypothetical protein TMHG_01176 [Mycobacterium tuberculosis SUMu008]
gi|308358218|gb|EFP47069.1| hypothetical protein TMJG_00248 [Mycobacterium tuberculosis SUMu010]
gi|308362149|gb|EFP51000.1| hypothetical protein TMKG_00250 [Mycobacterium tuberculosis SUMu011]
Length=242
Score = 492 bits (1266), Expect = 2e-137, Method: Compositional matrix adjust.
Identities = 242/242 (100%), Positives = 242/242 (100%), Gaps = 0/242 (0%)
Query 14 MKQTPPAAVGRRHLLEISASAAGVIALSACSGSPPEPGKGRPDTTPEQEVPVTAPEDLMR 73
MKQTPPAAVGRRHLLEISASAAGVIALSACSGSPPEPGKGRPDTTPEQEVPVTAPEDLMR
Sbjct 1 MKQTPPAAVGRRHLLEISASAAGVIALSACSGSPPEPGKGRPDTTPEQEVPVTAPEDLMR 60
Query 74 EHGVLKRILLIYREGIRRLQADDQSPAPALNESAQIIRRFIEDYHGQLEEQYVFPKLEQA 133
EHGVLKRILLIYREGIRRLQADDQSPAPALNESAQIIRRFIEDYHGQLEEQYVFPKLEQA
Sbjct 61 EHGVLKRILLIYREGIRRLQADDQSPAPALNESAQIIRRFIEDYHGQLEEQYVFPKLEQA 120
Query 134 GKLTDITSVLRTQHQRGRVLTDRVLAATTAAAAFDQPARDTLAQDMAAYIRMFEPHEARE 193
GKLTDITSVLRTQHQRGRVLTDRVLAATTAAAAFDQPARDTLAQDMAAYIRMFEPHEARE
Sbjct 121 GKLTDITSVLRTQHQRGRVLTDRVLAATTAAAAFDQPARDTLAQDMAAYIRMFEPHEARE 180
Query 194 DTVVFPALRDVMSAVEFRDMAETFEDEEHRRFGEAGFQSVVDKVADIEKSLGIYDLSQFT 253
DTVVFPALRDVMSAVEFRDMAETFEDEEHRRFGEAGFQSVVDKVADIEKSLGIYDLSQFT
Sbjct 181 DTVVFPALRDVMSAVEFRDMAETFEDEEHRRFGEAGFQSVVDKVADIEKSLGIYDLSQFT 240
Query 254 PS 255
PS
Sbjct 241 PS 242
>gi|326903608|gb|EGE50541.1| hypothetical protein TBPG_01484 [Mycobacterium tuberculosis W-148]
Length=248
Score = 490 bits (1262), Expect = 7e-137, Method: Compositional matrix adjust.
Identities = 242/245 (99%), Positives = 244/245 (99%), Gaps = 0/245 (0%)
Query 1 VVASGAATKGVTVMKQTPPAAVGRRHLLEISASAAGVIALSACSGSPPEPGKGRPDTTPE 60
+VASGAATKGVTVMKQTPPAAVGRRHLLEISASAAGVIALSACSGSPPEPGKGRPDTTPE
Sbjct 1 MVASGAATKGVTVMKQTPPAAVGRRHLLEISASAAGVIALSACSGSPPEPGKGRPDTTPE 60
Query 61 QEVPVTAPEDLMREHGVLKRILLIYREGIRRLQADDQSPAPALNESAQIIRRFIEDYHGQ 120
QEVPVTAPEDLMREHGVLKRILLIYREGIRRLQADDQSPAPALNESAQIIRRFIEDYHGQ
Sbjct 61 QEVPVTAPEDLMREHGVLKRILLIYREGIRRLQADDQSPAPALNESAQIIRRFIEDYHGQ 120
Query 121 LEEQYVFPKLEQAGKLTDITSVLRTQHQRGRVLTDRVLAATTAAAAFDQPARDTLAQDMA 180
LEEQYVFPKLEQAGKLTDITSVLRTQHQRGRVLTDRVLAATTAAAAFDQPARDTLAQDMA
Sbjct 121 LEEQYVFPKLEQAGKLTDITSVLRTQHQRGRVLTDRVLAATTAAAAFDQPARDTLAQDMA 180
Query 181 AYIRMFEPHEAREDTVVFPALRDVMSAVEFRDMAETFEDEEHRRFGEAGFQSVVDKVADI 240
AYIRMFEPHEAREDTVVFPALRDVMSAVEFRDMAETFEDEEHRRFGEAGFQSVVDKVADI
Sbjct 181 AYIRMFEPHEAREDTVVFPALRDVMSAVEFRDMAETFEDEEHRRFGEAGFQSVVDKVADI 240
Query 241 EKSLG 245
EK+L
Sbjct 241 EKALA 245
>gi|183982970|ref|YP_001851261.1| hypothetical protein MMAR_2968 [Mycobacterium marinum M]
gi|183176296|gb|ACC41406.1| conserved hypothetical protein [Mycobacterium marinum M]
Length=241
Score = 311 bits (797), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 162/243 (67%), Positives = 188/243 (78%), Gaps = 3/243 (1%)
Query 14 MKQTPPAAVGRRHLLEISASAAGVIALSACSGSPPEPGKGRPDTTPEQEVPVTAPEDLMR 73
M P + RR L I+ G IALSAC+GSP +P ++ ++V VTAPEDLMR
Sbjct 1 MIDEPHRPLSRRRLFGIAMPVTGAIALSACTGSPRKPADAGASSS--EQVAVTAPEDLMR 58
Query 74 EHGVLKRILLIYREGIRRLQADDQSPAPALNESAQIIRRFIEDYHGQLEEQYVFPKLEQA 133
EHGVLKRILLIYREGI RLQ D +P LN SAQIIR F+E+YH LEE+YVFP LEQA
Sbjct 59 EHGVLKRILLIYREGIHRLQVGDPAPTQELNASAQIIRAFVENYHEALEERYVFPMLEQA 118
Query 134 GKLTDITSVLRTQHQRGRVLTDRVLAATTAAAAF-DQPARDTLAQDMAAYIRMFEPHEAR 192
GK TD TSVLRTQHQRGR +TDR+LAAT AA + QP RD L +DM A+IRM+EPHEAR
Sbjct 119 GKFTDTTSVLRTQHQRGRGVTDRILAATAAAGSAPGQPGRDALVRDMTAFIRMYEPHEAR 178
Query 193 EDTVVFPALRDVMSAVEFRDMAETFEDEEHRRFGEAGFQSVVDKVADIEKSLGIYDLSQF 252
EDTV+FPALRDVM A EFRD+AE FEDEEHR+FG+AGFQ VVD+VAD+EK+LGIY+L QF
Sbjct 179 EDTVIFPALRDVMPAGEFRDLAEVFEDEEHRQFGQAGFQGVVDQVADVEKALGIYELGQF 238
Query 253 TPS 255
T S
Sbjct 239 TAS 241
>gi|118617754|ref|YP_906086.1| hypothetical protein MUL_2223 [Mycobacterium ulcerans Agy99]
gi|118569864|gb|ABL04615.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99]
Length=429
Score = 291 bits (746), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 162/249 (66%), Positives = 191/249 (77%), Gaps = 4/249 (1%)
Query 8 TKGVTVMKQTPPAAVGRRHLLEISASAAGVIALSACSGSPPEPGKGRPDTTPEQEVPVTA 67
T+G V+ + P + RR L I+ G IALSAC+GSP +P ++ ++V VTA
Sbjct 184 TRGAIVIDE-PHRPLSRRRLFGIAMPVTGAIALSACTGSPRKPADAGASSS--EQVTVTA 240
Query 68 PEDLMREHGVLKRILLIYREGIRRLQADDQSPAPALNESAQIIRRFIEDYHGQLEEQYVF 127
EDLMREHGVLKRILLIYREGI RLQ D +P LN SAQIIR F+E+YH LEE+YVF
Sbjct 241 LEDLMREHGVLKRILLIYREGIHRLQVGDPAPTQELNASAQIIRAFVENYHEALEERYVF 300
Query 128 PKLEQAGKLTDITSVLRTQHQRGRVLTDRVLAATTAAAAF-DQPARDTLAQDMAAYIRMF 186
P LEQAGK TD TSVLRTQHQRGR +TDR+LAAT AA + QP RD L +DM A+IRM+
Sbjct 301 PMLEQAGKFTDTTSVLRTQHQRGRGVTDRILAATAAAGSAPGQPGRDALVRDMTAFIRMY 360
Query 187 EPHEAREDTVVFPALRDVMSAVEFRDMAETFEDEEHRRFGEAGFQSVVDKVADIEKSLGI 246
EPHEAREDTV+FPALRDVM A EFRD+AE FEDEEHR+FG+AGFQ VVD+V D+EK+LGI
Sbjct 361 EPHEAREDTVIFPALRDVMPAGEFRDLAEVFEDEEHRQFGQAGFQGVVDQVVDVEKALGI 420
Query 247 YDLSQFTPS 255
Y+L QFT S
Sbjct 421 YELGQFTAS 429
>gi|282889686|ref|ZP_06298225.1| hypothetical protein pah_c004o028 [Parachlamydia acanthamoebae
str. Hall's coccus]
gi|338176031|ref|YP_004652841.1| protein Mb2018 [Parachlamydia acanthamoebae UV7]
gi|281500260|gb|EFB42540.1| hypothetical protein pah_c004o028 [Parachlamydia acanthamoebae
str. Hall's coccus]
gi|336480389|emb|CCB86987.1| uncharacterized protein Mb2018 [Parachlamydia acanthamoebae UV7]
Length=227
Score = 207 bits (527), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 98/227 (44%), Positives = 151/227 (67%), Gaps = 3/227 (1%)
Query 28 LEISASAAGVIALSACSGSPPEPGKGRPDTTPEQEVPVTAPEDLMREHGVLKRILLIYRE 87
++I ++ G++ S+ G+ + T E+ ++ EDLMREHGVL R+LLIY+E
Sbjct 1 MKILSAFIGILVFSSTLLFADSIGEQKETLTSEE---ISPNEDLMREHGVLNRLLLIYQE 57
Query 88 GIRRLQADDQSPAPALNESAQIIRRFIEDYHGQLEEQYVFPKLEQAGKLTDITSVLRTQH 147
RR+ + P L ++A+I+R F+EDYH +LEE+YVFP+ +A + ++ VL+ QH
Sbjct 58 IARRIDNHEAFPVQILAKTAKIVRDFLEDYHEKLEEEYVFPQFVKANQHIELVRVLKDQH 117
Query 148 QRGRVLTDRVLAATTAAAAFDQPARDTLAQDMAAYIRMFEPHEAREDTVVFPALRDVMSA 207
Q GR LTD +L+ T+ A D+ + LA + Y+RMF PHEAREDT++FPA + ++S
Sbjct 118 QVGRQLTDYILSHTSEADLKDEIQKMILADYLRLYVRMFRPHEAREDTILFPAFQKLLSK 177
Query 208 VEFRDMAETFEDEEHRRFGEAGFQSVVDKVADIEKSLGIYDLSQFTP 254
E+ + + FED+EH FG AGF+ +VD+VA IE+ LG+Y+L++FTP
Sbjct 178 EEYMKLGDKFEDKEHELFGSAGFEGIVDQVAKIEQQLGVYNLAEFTP 224
>gi|270158658|ref|ZP_06187315.1| conserved hypothetical protein [Legionella longbeachae D-4968]
gi|289166529|ref|YP_003456667.1| hypothetical protein LLO_3216 [Legionella longbeachae NSW150]
gi|269990683|gb|EEZ96937.1| conserved hypothetical protein [Legionella longbeachae D-4968]
gi|288859702|emb|CBJ13672.1| hypothetical protein LLO_3216 [Legionella longbeachae NSW150]
Length=237
Score = 199 bits (505), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 98/233 (43%), Positives = 145/233 (63%), Gaps = 2/233 (0%)
Query 22 VGRRHLLEISASAAGVIALSACSGSPPEPGKGRPDTTPEQEVPVTAPEDLMREHGVLKRI 81
+ RR L+ G + ++ + G G + + +T EDLMREHGVL+RI
Sbjct 6 LSRRDFLKKVGLILGGVLITGPLLTKSLFGAGEKIASLNKGGDITPDEDLMREHGVLRRI 65
Query 82 LLIYREGIRRLQADDQSPAPALNESAQIIRRFIEDYHGQLEEQYVFPKLEQAGKLTDITS 141
+LIYR+ I R+ + +N+SA IIR FIE+YH +LEE ++FP+ E+ G+L + S
Sbjct 66 ILIYRQAIHRINEGQELNPAIINKSAAIIRSFIENYHEKLEENFIFPRFEKEGQLITLVS 125
Query 142 VLRTQHQRGRVLTDRVLAATTAAAAFDQPARDTLAQDMAAYIRMFEPHEAREDTVVFPAL 201
L+TQHQ GR LTD VL + + L + +I M+EPH AREDTV+FPAL
Sbjct 126 TLKTQHQVGRKLTDTVLEFSKPRQF--KSHNKELVNILFQFINMYEPHAAREDTVLFPAL 183
Query 202 RDVMSAVEFRDMAETFEDEEHRRFGEAGFQSVVDKVADIEKSLGIYDLSQFTP 254
R+++S E+++M E FE EEH+ FG++GF+ +V ++A+IE L IY+L +FTP
Sbjct 184 RNIVSDSEYKEMGEQFEAEEHKLFGKSGFEGIVSQIAEIEMGLNIYELPEFTP 236
>gi|162450141|ref|YP_001612508.1| hypothetical protein sce1870 [Sorangium cellulosum 'So ce 56']
gi|161160723|emb|CAN92028.1| hypothetical protein predicted by Glimmer/Critica [Sorangium
cellulosum 'So ce 56']
Length=238
Score = 183 bits (464), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 105/229 (46%), Positives = 144/229 (63%), Gaps = 11/229 (4%)
Query 34 AAGVIALSACSGSPPEPGKGRPDTTPEQEVP------VTAPEDLMREHGVLKRILLIYRE 87
A I +SA G+ PG D P+QE VT EDLMREHGVL+R++ +Y E
Sbjct 14 ATSSIGMSAVLGACARPGAAARD--PKQEGSAGEGDEVTPGEDLMREHGVLRRVMFLYDE 71
Query 88 GIRRLQADDQSPAPALNESAQIIRRFIEDYHGQLEEQYVFPKLEQAGKLTDITSVLRTQH 147
IRRL ++ P L +A ++RR IEDYH +LEE ++FP+ E+AGK ++ VLR QH
Sbjct 72 AIRRLDGHEEVPEDVLLSAAGVVRRVIEDYHEKLEEDFLFPRFERAGKHAELVVVLRRQH 131
Query 148 QRGRVLTDRVLAATTAAAAF-DQPARDTLAQDMAAYIRMFEPHEAREDTVVFPALRDVMS 206
Q GR++T VL T A +Q AR LA + A+ RM+ PH AREDTV+FPALR ++
Sbjct 132 QAGRLVTADVL--TLAREPLREQAARRRLADRLRAFNRMYRPHAAREDTVLFPALRALVG 189
Query 207 AVEFRDMAETFEDEEHRRFGEAGFQSVVDKVADIEKSLGIYDLSQFTPS 255
+ ++ E FED+EHR GE GF+ V +V ++E +LGI DL+ FTP+
Sbjct 190 GKAYAELGEQFEDKEHRMLGEGGFEKAVAEVTELEAALGIADLASFTPT 238
>gi|146341547|ref|YP_001206595.1| hypothetical protein BRADO4645 [Bradyrhizobium sp. ORS 278]
gi|146194353|emb|CAL78377.1| conserved hypothetical protein; putative secreted protein, with
putative Hemerythrin HHE cation binding region [Bradyrhizobium
sp. ORS 278]
Length=240
Score = 181 bits (458), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 99/232 (43%), Positives = 138/232 (60%), Gaps = 2/232 (0%)
Query 24 RRHLLEISASAAGVIALSACSGSPPEPGKGRPDTTPEQE-VPVTAPEDLMREHGVLKRIL 82
RR LL AA + + +P + RP E VT PEDLMREHGVL R+L
Sbjct 9 RRRLLLTGIVAAVAAPAVLTAPTFAQPKRARPSENKETSGEEVTPPEDLMREHGVLDRVL 68
Query 83 LIYREGIRRLQADDQSPAPALNESAQIIRRFIEDYHGQLEEQYVFPKLEQAGKLTDITSV 142
L+Y G+R+ A+ + +SA II+ FI DYH + EE +VFP+ + AGK+TD+
Sbjct 69 LLYEAGMRKYAANQDFDPSLITQSAGIIKDFIHDYHEKSEEHHVFPRFKAAGKMTDLVGT 128
Query 143 LRTQHQRGRVLTDRVLAATTAAAAFDQPARDTLAQDMAAYIRMFEPHEAREDTVVFPALR 202
L QH+ GR +T+ +L + + R L M ++I M+ PH AREDT +FP LR
Sbjct 129 LEQQHEAGREVTETILRLSPTGRD-NADDRRQLVAAMQSFITMYRPHAAREDTELFPKLR 187
Query 203 DVMSAVEFRDMAETFEDEEHRRFGEAGFQSVVDKVADIEKSLGIYDLSQFTP 254
DV+SA E+ MAE FE +EH FG GF+ + +VA +E+ +GI+DL+QFTP
Sbjct 188 DVVSAHEYDAMAEDFETKEHELFGADGFEKMTARVAGLEQQMGIFDLTQFTP 239
>gi|160879601|ref|YP_001558569.1| hypothetical protein Cphy_1456 [Clostridium phytofermentans ISDg]
gi|160428267|gb|ABX41830.1| conserved hypothetical protein [Clostridium phytofermentans ISDg]
Length=206
Score = 176 bits (445), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 90/197 (46%), Positives = 124/197 (63%), Gaps = 4/197 (2%)
Query 61 QEVPVTAPEDLMREHGVLKRILLIYREGIRRLQADD-QSPAP---ALNESAQIIRRFIED 116
Q+V ++ EDLMREHG+L RILLIY++ I R+ D +P P + ES I++RFI +
Sbjct 6 QQVQISPVEDLMREHGLLHRILLIYKDIIDRMTVSDIYTPEPIYSCIRESTIIVKRFIIE 65
Query 117 YHGQLEEQYVFPKLEQAGKLTDITSVLRTQHQRGRVLTDRVLAATTAAAAFDQPARDTLA 176
YH LE+ YVFP L Q K + +L TQH+ + TD +L + + + L
Sbjct 66 YHQVLEQDYVFPILSQHEKYKQLIQILLTQHEAAKCATDEILTILGSELKRIKIYQKRLL 125
Query 177 QDMAAYIRMFEPHEAREDTVVFPALRDVMSAVEFRDMAETFEDEEHRRFGEAGFQSVVDK 236
Q M+ +I+M+EPH AREDTV+FPA + FR + E FED E ++FGE GFQ+V++
Sbjct 126 QLMSEFIQMYEPHSAREDTVIFPAFHQLTPPDTFRALGEKFEDIEEQKFGENGFQNVLEH 185
Query 237 VADIEKSLGIYDLSQFT 253
V IEKSL IYDL+QFT
Sbjct 186 VTQIEKSLAIYDLNQFT 202
>gi|332703755|ref|ZP_08423843.1| Hemerythrin HHE cation binding domain protein [Desulfovibrio
africanus str. Walvis Bay]
gi|332553904|gb|EGJ50948.1| Hemerythrin HHE cation binding domain protein [Desulfovibrio
africanus str. Walvis Bay]
Length=228
Score = 162 bits (409), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 77/195 (40%), Positives = 118/195 (61%), Gaps = 2/195 (1%)
Query 61 QEVPVTAPEDLMREHGVLKRILLIYREGIRRLQADDQSPAPALNESAQIIRRFIEDYHGQ 120
Q+ +T EDLM+EHG++ R++L+Y E RR+ A++ P AL +AQ + F YH +
Sbjct 35 QKSEITPNEDLMKEHGLISRMMLVYEEIARRIHANESVPNGALKSAAQAVHEFSGSYHEK 94
Query 121 LEEQYVFPKLEQAGKLTDITSVLRTQHQRGRVLTDRVLAATTAAAAFDQPARDTLAQDMA 180
EE VFP+ G+L ++ +L+ QH GR +T R+L T+ ++ + +
Sbjct 95 HEENQVFPRFGSQGQLAELAKILKKQHDAGRNITKRLL--DTSPGQLTAKSQTQVVHLLN 152
Query 181 AYIRMFEPHEAREDTVVFPALRDVMSAVEFRDMAETFEDEEHRRFGEAGFQSVVDKVADI 240
+Y M+ PH A EDTV+FPA R +M E+ + E FE+ EH+ GE GF ++ V D+
Sbjct 153 SYTNMYYPHMAWEDTVLFPAFRSLMPEKEYMRLGEEFEETEHKILGEGGFDRILATVIDL 212
Query 241 EKSLGIYDLSQFTPS 255
EK+L I+DLS+FTPS
Sbjct 213 EKALDIHDLSRFTPS 227
>gi|94968351|ref|YP_590399.1| hypothetical protein Acid345_1323 [Candidatus Koribacter versatilis
Ellin345]
gi|94550401|gb|ABF40325.1| conserved hypothetical protein [Candidatus Koribacter versatilis
Ellin345]
Length=235
Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 96/240 (40%), Positives = 141/240 (59%), Gaps = 16/240 (6%)
Query 19 PAAVGRRHLLEISASAAGVIALSACSGSPPEPGKGRPDTTPEQEVPVTAPEDLMREHGVL 78
P + RR LL+ S AA AL + E K P+ VTA EDLMREHGV+
Sbjct 2 PDPLSRRELLQKSPIAAA--ALLVPTALFAEEKKDEPE--------VTATEDLMREHGVI 51
Query 79 KRILLIYREGIRRLQADDQSPAPA-LNESAQIIRRFIEDYHG-QLEEQYVFPKLEQAGK- 135
+R LL+Y E + +L++D S PA L ++A++ R F EDYH QLEE+++FP +++ K
Sbjct 52 RRALLVYAELVPKLKSDPGSVDPAALQKTAKLFRTFGEDYHERQLEEEHIFPTIKKMNKP 111
Query 136 -LTDITSVLRTQHQRGRVLTDRVLAATTAAAAFDQPARDTLAQDMAAYIRMFEPHEARED 194
LT VL QHQRGR +T+ V+A T + D LA+ A+ M++ H ARED
Sbjct 112 KLTHYVDVLTAQHQRGREITEYVIAVTNGKIG--KQHGDELAKIFEAFTLMYQNHAARED 169
Query 195 TVVFPALRDVMSAVEFRDMAETFEDEEHRRFGEAGFQSVVDKVADIEKSLGIYDLSQFTP 254
T++FPA + + + ++ + FED EH+ FG+ GF + ++ IEK+ G D++QFTP
Sbjct 170 TILFPAWKTNYTNKQLDEIGDQFEDIEHKTFGKDGFDDAEETISQIEKTFGFEDIAQFTP 229
>gi|220923041|ref|YP_002498343.1| Hemerythrin HHE cation binding domain-containing protein [Methylobacterium
nodulans ORS 2060]
gi|219947648|gb|ACL58040.1| Hemerythrin HHE cation binding domain protein [Methylobacterium
nodulans ORS 2060]
Length=257
Score = 148 bits (373), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 87/219 (40%), Positives = 133/219 (61%), Gaps = 10/219 (4%)
Query 41 SACSGSPP-EPGKGRPDTTPEQEVPVTAPEDLMREHGVLKRILLIYREGIRRLQADDQSP 99
SA G+ +PG+G D + V+A EDLMREHGVL+R L++Y E RL+++
Sbjct 37 SAAQGTRSRKPGEGGKDEQGGDDEDVSATEDLMREHGVLRRTLIVYAELSERLRSNTGRI 96
Query 100 AP-ALNESAQIIRRFIEDYHGQ-LEEQYVFPKLEQAGK-LTDITSVLRTQHQRGRVLTDR 156
P AL ++A++ R F EDYH LEEQ+VFP++ + G + VL QHQRGR +TD
Sbjct 97 DPGALADAAKLFREFGEDYHEHTLEEQHVFPEVRKGGGPNAKLVEVLLIQHQRGREITDY 156
Query 157 V--LAATTAAAAFDQPARDTLAQDMAAYIRMFEPHEAREDTVVFPALRDVMSAVEFRDMA 214
+ + + +P LA+ +A+ RM++ H A EDTVVFPA + S ++A
Sbjct 157 LYRIGSRGQIGGDAEP----LARALASMTRMYQAHAAFEDTVVFPAWKKTQSKQRLGELA 212
Query 215 ETFEDEEHRRFGEAGFQSVVDKVADIEKSLGIYDLSQFT 253
E FED E +RFG+ GF +++++ +E++LG+ DL+ +T
Sbjct 213 EKFEDIEKKRFGKDGFDEAIERISKVEQALGLADLAVYT 251
>gi|282164998|ref|YP_003357383.1| hypothetical protein MCP_2328 [Methanocella paludicola SANAE]
gi|282157312|dbj|BAI62400.1| conserved hypothetical protein [Methanocella paludicola SANAE]
Length=220
Score = 142 bits (359), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 68/187 (37%), Positives = 111/187 (60%), Gaps = 0/187 (0%)
Query 69 EDLMREHGVLKRILLIYREGIRRLQADDQSPAPALNESAQIIRRFIEDYHGQLEEQYVFP 128
EDLMREHGV++RILLIY+ + + + A+N+++Q++ ++ +H + EE Y+FP
Sbjct 24 EDLMREHGVVERILLIYQRILEKAITGQEIDISAINKASQMVDMYVSKHHEEDEENYIFP 83
Query 129 KLEQAGKLTDITSVLRTQHQRGRVLTDRVLAATTAAAAFDQPARDTLAQDMAAYIRMFEP 188
K +A + +I L QH R L +++ + A Q L YI M+ P
Sbjct 84 KFREANYIVEIVDTLEHQHDVARELNRQIMDLSAQGADISQEDLVRLLDRCGMYINMYLP 143
Query 189 HEAREDTVVFPALRDVMSAVEFRDMAETFEDEEHRRFGEAGFQSVVDKVADIEKSLGIYD 248
H +RE+T+VFP D++S +D+ E EDEE + G+ GF+ +V +V++IEK +G +D
Sbjct 144 HISRENTIVFPTFFDIVSNEYIQDIKEKMEDEEEQALGDTGFRGLVGRVSEIEKQVGCHD 203
Query 249 LSQFTPS 255
LSQ+T +
Sbjct 204 LSQYTAN 210
>gi|116749945|ref|YP_846632.1| hemerythrin HHE cation binding domain-containing protein [Syntrophobacter
fumaroxidans MPOB]
gi|116699009|gb|ABK18197.1| Hemerythrin HHE cation binding domain protein [Syntrophobacter
fumaroxidans MPOB]
Length=232
Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 76/231 (33%), Positives = 131/231 (57%), Gaps = 10/231 (4%)
Query 24 RRHLLEISASAAGVIALSACSGSPPEPGKGRPDTTPEQEVPVTAPEDLMREHGVLKRILL 83
RR L ++ +A + L+ CSG E K D ++APE LMR+HGVL R+L+
Sbjct 9 RRDFLVVTGAAGAGLLLAGCSG---EEKKRAADL-------ISAPERLMRQHGVLSRLLM 58
Query 84 IYREGIRRLQADDQSPAPALNESAQIIRRFIEDYHGQLEEQYVFPKLEQAGKLTDITSVL 143
I E +RR+ A + P + ++++ F++ +H + EE+ +FP L KL + +VL
Sbjct 59 ILEESLRRVDAHMELPLEVIPGVVEVVQNFVQMHHEKQEEEEIFPLLANNDKLVGLIAVL 118
Query 144 RTQHQRGRVLTDRVLAATTAAAAFDQPARDTLAQDMAAYIRMFEPHEAREDTVVFPALRD 203
+ QH+ GR +T R+L ++ AA + R L ++ RM+ H REDTV+FPAL
Sbjct 119 KAQHRAGREITARILEYSSTAALKELETRRKLNSEVRQLARMYRAHSNREDTVLFPALDS 178
Query 204 VMSAVEFRDMAETFEDEEHRRFGEAGFQSVVDKVADIEKSLGIYDLSQFTP 254
++A ++R ++ ++ + G+ F+ V++VA +EK + + DL+ F+P
Sbjct 179 AVTAAQYRALSAGMTQKQQQAPGDGAFEKTVERVAALEKLVAMDDLAGFSP 229
>gi|73541331|ref|YP_295851.1| hypothetical protein Reut_A1641 [Ralstonia eutropha JMP134]
gi|72118744|gb|AAZ61007.1| hypothetical protein Reut_A1641 [Ralstonia eutropha JMP134]
Length=268
Score = 130 bits (328), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 81/196 (42%), Positives = 109/196 (56%), Gaps = 4/196 (2%)
Query 61 QEVPVTAPEDLMREHGVLKRILLIYREGIRRLQADDQS-PAPALNESAQIIRRFIEDYHG 119
QE VTA EDLMREHGVL+R LL+Y RL S PA AL +A++ R F EDYH
Sbjct 65 QEKKVTANEDLMREHGVLRRALLVYGAAADRLMQQPASLPAHALARTARLFRTFGEDYHE 124
Query 120 Q-LEEQYVFPKLEQ-AGKLTDITSVLRTQHQRGRVLTDRVLAATTAAAAFDQPARDTLAQ 177
+ LEE+ +FP + + G ++ VL+ QH RGR LTD VL A LA
Sbjct 125 RRLEEKIIFPAIRKLEGPVSRYADVLQQQHDRGRDLTDYVLRVAQGGNVAGSNA-APLAA 183
Query 178 DMAAYIRMFEPHEAREDTVVFPALRDVMSAVEFRDMAETFEDEEHRRFGEAGFQSVVDKV 237
+ + M+ H AREDTVVF A ++ +S + + E FE E + FG GF ++
Sbjct 184 ALREFNLMYAHHAAREDTVVFTAWKNSLSQKNYEEAGEEFEKIEKQVFGHDGFDYASKEI 243
Query 238 ADIEKSLGIYDLSQFT 253
A IE +G+ D+ +FT
Sbjct 244 ASIEDEMGLSDIGRFT 259
>gi|282165624|ref|YP_003358009.1| hypothetical protein MCP_2954 [Methanocella paludicola SANAE]
gi|282157938|dbj|BAI63026.1| conserved hypothetical protein [Methanocella paludicola SANAE]
Length=224
Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/212 (31%), Positives = 106/212 (50%), Gaps = 0/212 (0%)
Query 42 ACSGSPPEPGKGRPDTTPEQEVPVTAPEDLMREHGVLKRILLIYREGIRRLQADDQSPAP 101
A G + + RP E+ + V+APE L REH +L R+LL + D +
Sbjct 12 AFLGIFAQATQARPTWASERSMNVSAPEALSREHAMLTRLLLAIDNVVDSALDDRSTDLS 71
Query 102 ALNESAQIIRRFIEDYHGQLEEQYVFPKLEQAGKLTDITSVLRTQHQRGRVLTDRVLAAT 161
+N +A I++ + D+H EE+ V+P++EQ L+ +T L QH RV+ VL T
Sbjct 72 PINSAANAIQKVVADHHMAFEEESVYPRMEQIDYLSSMTETLEGQHDDARVVNKMVLDLT 131
Query 162 TAAAAFDQPARDTLAQDMAAYIRMFEPHEAREDTVVFPALRDVMSAVEFRDMAETFEDEE 221
+ D LA ++ M H A E+TV+FPA+ D++ + D+ + F + E
Sbjct 132 RGGKVKGKSEMDELALLTKSFKDMITAHAAWEETVIFPAMYDLLPERDMDDINKQFMEAE 191
Query 222 HRRFGEAGFQSVVDKVADIEKSLGIYDLSQFT 253
R G G + + +IE++ G +DLS +T
Sbjct 192 QRLLGNKGIVEIYRAIDNIEEAAGTHDLSMYT 223
>gi|147919528|ref|YP_686732.1| hemerythrin-like protein [uncultured methanogenic archaeon RC-I]
gi|110622128|emb|CAJ37406.1| predicted hemerythrin-like protein [uncultured methanogenic archaeon
RC-I]
Length=210
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/209 (29%), Positives = 108/209 (52%), Gaps = 4/209 (1%)
Query 46 SPPEPGKGRPDTTPEQEVPVTAPEDLMREHGVLKRILLIYREGIRRLQADDQSPAPALNE 105
+P EP P ++ V + E L R+H +++R+++ I + LN
Sbjct 5 APQEP----PGRFGKESVMTSPTEMLSRDHALMERLMISIESMIASIANGASMDLRPLNR 60
Query 106 SAQIIRRFIEDYHGQLEEQYVFPKLEQAGKLTDITSVLRTQHQRGRVLTDRVLAATTAAA 165
+A ++++ ++H EE+ +FP++E +G+ D+ LR QH RGR + DR++ T A
Sbjct 61 AALLMKKLGAEHHMSDEERLIFPRIETSGRHEDLLKTLRLQHDRGRAIIDRIIDTTQAGG 120
Query 166 AFDQPARDTLAQDMAAYIRMFEPHEAREDTVVFPALRDVMSAVEFRDMAETFEDEEHRRF 225
+ + + ++I M+ H A E+TV+FPAL D S+ E ++ EE
Sbjct 121 VDTVGEMNEIVRLCMSFIVMYRSHAAIEETVLFPALYDFASSDEIMNIQAIMRGEEEGLM 180
Query 226 GEAGFQSVVDKVADIEKSLGIYDLSQFTP 254
+ F++++D +A IE G D+S+FTP
Sbjct 181 RDQRFRNMMDSLAAIEAVAGTSDISRFTP 209
>gi|147921436|ref|YP_684749.1| hypothetical protein LRC475 [uncultured methanogenic archaeon
RC-I]
gi|110620145|emb|CAJ35423.1| conserved hypothetical protein [uncultured methanogenic archaeon
RC-I]
Length=209
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/189 (27%), Positives = 90/189 (48%), Gaps = 6/189 (3%)
Query 65 VTAPEDLMREHGVLKRILLIYREGIRRLQADDQSPAPALNESAQIIRRFIEDYHGQLEEQ 124
++A ++L EH +L RI+L IR +S ++I++ ++ +H +EE+
Sbjct 23 ISATQELGLEHALLDRIMLAMNHTIRMAGKGSKSSLEPCVRGCELIKQVVDKHHMVMEEE 82
Query 125 YVFPKLEQAGKLTDITSVLRTQHQRGRVLTDRVLAATTAAAAFDQPARDTLAQDMAAYIR 184
++P+ E KL D+ VL+ QH R + R+ + + D+ R+T +
Sbjct 83 EIYPRFENT-KLADLARVLKDQHTEMRKMVARMENLASKGSDVDE-LRNTFMD----FHD 136
Query 185 MFEPHEAREDTVVFPALRDVMSAVEFRDMAETFEDEEHRRFGEAGFQSVVDKVADIEKSL 244
M H A E+T +FP + S + ++ ET E E + GE + V+++E S
Sbjct 137 MVMAHAAWEETCLFPCMEGTWSQSDLDNLKETQEKHEKKLLGEDATMKIYGMVSELESSA 196
Query 245 GIYDLSQFT 253
GI L FT
Sbjct 197 GISGLKDFT 205
>gi|77917922|ref|YP_355737.1| hypothetical protein Pcar_0307 [Pelobacter carbinolicus DSM 2380]
gi|77544005|gb|ABA87567.1| conserved hypothetical protein [Pelobacter carbinolicus DSM 2380]
Length=184
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/164 (29%), Positives = 76/164 (47%), Gaps = 2/164 (1%)
Query 65 VTAPEDLMREHGVLKRILLIYREGIRRLQADDQSPAPALNESAQIIRRFIEDYHGQLEEQ 124
+ A E L +EH + ++LLI RL+ + P L A+ + FI+ H EE+
Sbjct 1 MQAIEQLKKEHEGIMQMLLILENVAGRLERQETVPPEDLQAMAEFLSVFIDRCHHSKEEE 60
Query 125 YVFPKLEQAG--KLTDITSVLRTQHQRGRVLTDRVLAATTAAAAFDQPARDTLAQDMAAY 182
Y+FP LE+AG + L +H GR L + + + D A+ ++ Y
Sbjct 61 YLFPALEEAGLPRQGHPVETLLDEHATGRKLIATLQESLARIRSGDARGAQLFAETVSQY 120
Query 183 IRMFEPHEAREDTVVFPALRDVMSAVEFRDMAETFEDEEHRRFG 226
+ + E H +E TV+FP + + ++ E FE+ E R G
Sbjct 121 MDLLELHIEKERTVLFPLAEKHLDLRQDAELLEAFENLEKERIG 164
>gi|85860340|ref|YP_462542.1| cytoplasmic protein [Syntrophus aciditrophicus SB]
gi|85723431|gb|ABC78374.1| hypothetical cytosolic protein [Syntrophus aciditrophicus SB]
Length=196
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/181 (26%), Positives = 84/181 (47%), Gaps = 6/181 (3%)
Query 65 VTAPEDLMREHGVLKRILLIYREGIRRLQADDQSPAPALNESAQIIRRFIEDYHGQLEEQ 124
+ A + L EH +K +L I + R+L+ D + + ++ F++ H EE
Sbjct 14 MKATQQLRNEHEGVKIMLNILEQVCRQLETDGNLNEEHFDGILEFLKVFVDKCHHGKEED 73
Query 125 YVFPKLEQAGKLTDI-TSVLRTQHQRGRVLTDRVLAATTAAAAFDQPARDTLAQDMAAYI 183
+FP L AG D +V+ +H+ GR + A A A ++ A T+ ++ AYI
Sbjct 74 LLFPALITAGVSKDGPIAVMLQEHEMGRNYVKSMSDAYAACAGGNESASKTIRKNALAYI 133
Query 184 RMFEPHEAREDTVVFPALRDVMSAVEFRDMAETFEDEEHRRFGEAG----FQSVVDKVAD 239
+ H +E+ V+F ++S ++ E FE E R G AG F ++ K++
Sbjct 134 TLLRNHIEKENNVLFVMADSLLSEKTQDELFEGFERIEEERIG-AGKHEEFHGLLGKLSK 192
Query 240 I 240
+
Sbjct 193 M 193
>gi|256828988|ref|YP_003157716.1| Hemerythrin HHE cation binding domain-containing protein [Desulfomicrobium
baculatum DSM 4028]
gi|256578164|gb|ACU89300.1| Hemerythrin HHE cation binding domain protein [Desulfomicrobium
baculatum DSM 4028]
Length=182
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/179 (25%), Positives = 78/179 (44%), Gaps = 7/179 (3%)
Query 67 APEDLMREHGVLKRILLIYREGIRRLQADDQSPAPALNESAQIIRRFIEDYHGQLEEQYV 126
A ++L+ EH ++ +L I + RL P L + + F++ H EE+Y+
Sbjct 3 ATKELILEHQDIELMLEILKTVSTRLLDGGAVPPEHLEGILEFLTVFVDKCHHGKEEKYL 62
Query 127 FPKLEQAG--KLTDITSVLRTQHQRGRVLTDRVLAATTAAAAFDQPARDTLAQDMAAYIR 184
F +E AG +T VL +H++GR+ R+ A P + A Y+
Sbjct 63 FRAMEAAGVDHITGHIGVLIYEHEQGRIHIARI--KNGLAGTLGVPDMTEVRAAAADYVE 120
Query 185 MFEPHEAREDTVVFPALRDVMSAVEFRDMAETFEDEEHRRFGEAG---FQSVVDKVADI 240
+ H E+T VFP ++ A + E F+ E GE F ++++ + D+
Sbjct 121 LMVQHITTENTDVFPMADKILDAGSVGKLCENFKKHEREWIGEGKHEEFHTLLETLQDV 179
>gi|73671097|ref|YP_307112.1| hypothetical protein Mbar_A3669 [Methanosarcina barkeri str.
Fusaro]
gi|72398259|gb|AAZ72532.1| conserved hypothetical protein [Methanosarcina barkeri str. Fusaro]
Length=185
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/159 (26%), Positives = 79/159 (50%), Gaps = 12/159 (7%)
Query 68 PEDLMRE-HGVLKRILLIYREGI-RRLQADDQSPAPALNESAQIIRRFIEDYHGQLEEQY 125
P D +RE H ++K+++L +GI +++ L ++ FIED H + EE Y
Sbjct 3 PTDYLREEHRIIKQVMLPVLDGICMEIESGRSVEQNNLEGLIVFVKEFIEDSHYKKEETY 62
Query 126 VFPKLEQAGKL--TDITSVLRTQHQRGRVLTDRVLAATTAAAAFDQPARDTL---AQDMA 180
+FP++E+AG L ++ + L+ +H R + + F++ + L +
Sbjct 63 LFPEIEKAGVLGAEELITSLKKEHDEERQYINEI-----NKVVFEEEEKRELPAIVEYSR 117
Query 181 AYIRMFEPHEAREDTVVFPALRDVMSAVEFRDMAETFED 219
+Y+R+ H +E+ +FP +S +D+ ++FED
Sbjct 118 SYMRLLTLHIDKEENELFPMADTYLSPPVQKDLLKSFED 156
>gi|291458188|ref|ZP_06597578.1| putative hemerythrin HHE cation binding region [Oribacterium
sp. oral taxon 078 str. F0262]
gi|291418721|gb|EFE92440.1| putative hemerythrin HHE cation binding region [Oribacterium
sp. oral taxon 078 str. F0262]
Length=192
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/181 (24%), Positives = 88/181 (49%), Gaps = 13/181 (7%)
Query 69 EDLMREHGVLKRILLIYREGIRRLQADDQSPAPALNESAQIIRRFIEDYHGQLEEQYVFP 128
E +++EH ++R+L + R +L + P L E +R + + +H EE+++FP
Sbjct 7 ELMVKEHSEIERMLFVIRRICLKLMDGGEVPVSDLREIIDFVRNYADKHHHGKEEKFLFP 66
Query 129 KL-EQAGKLTD--ITSVLRTQHQRGRVLTDRVLAATTAAAAFDQPARDTLAQDM----AA 181
+ E+ G++ D +T + +H GR +L A +++ L D+ A
Sbjct 67 LMVEKMGRIADNLVTHGMLVEHDLGR---GDILCLENALREYEEKQSPELKLDILSYAMA 123
Query 182 YIRMFEPHEAREDTVVFPALRDVMSAVEFRDMAET---FEDEEHRRFGEAGFQSVVDKVA 238
Y + + H +E++VV+P +S + + E FE+E+ + + F S++D++
Sbjct 124 YAHLLQLHVEKENSVVYPFAERQLSEEDLCTVDEKSRAFEEEQEKLGVQERFLSLLDRME 183
Query 239 D 239
+
Sbjct 184 E 184
>gi|300088565|ref|YP_003759087.1| hemerythrin hhE cation-binding domain-containing protein [Dehalogenimonas
lykanthroporepellens BL-DC-9]
gi|299528298|gb|ADJ26766.1| Hemerythrin HHE cation binding domain protein [Dehalogenimonas
lykanthroporepellens BL-DC-9]
Length=183
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/137 (28%), Positives = 61/137 (45%), Gaps = 2/137 (1%)
Query 65 VTAPEDLMREHGVLKRILLIYREGIRRLQADDQSPAPALNESAQIIRRFIEDYHGQLEEQ 124
+ A + L EH ++ +L +L ++ + LN IR F + H EE
Sbjct 1 MKATDQLKEEHRAIEELLATLGRMTPKLATEEAVASEDLNAVVDFIRIFADRCHHGKEES 60
Query 125 YVFPKLEQAG--KLTDITSVLRTQHQRGRVLTDRVLAATTAAAAFDQPARDTLAQDMAAY 182
+FP +E+AG + VL +HQ+GR R+ +A A D+ A + + Y
Sbjct 61 LLFPAMEEAGVPRENGPVGVLLAEHQQGREFVSRLAEGISAYVAGDRTAAEIIRVSAEGY 120
Query 183 IRMFEPHEAREDTVVFP 199
+ H +ED V+FP
Sbjct 121 AALLTQHIQKEDNVLFP 137
>gi|116750360|ref|YP_847047.1| hemerythrin HHE cation binding domain-containing protein [Syntrophobacter
fumaroxidans MPOB]
gi|116699424|gb|ABK18612.1| Hemerythrin HHE cation binding domain protein [Syntrophobacter
fumaroxidans MPOB]
Length=184
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/178 (24%), Positives = 83/178 (47%), Gaps = 5/178 (2%)
Query 65 VTAPEDLMREHGVLKRILLIYREGIRRLQADDQSPAPALNESAQIIRRFIEDYHGQLEEQ 124
+ A ++L +EH ++ +L + R + ++ L + + F++ H EE+
Sbjct 1 MKATDELKKEHRGIELMLRVLEAVADRFRRGERVDPAHLQGILEFLSVFVDKCHHGKEEE 60
Query 125 YVFPKLEQAG--KLTDITSVLRTQHQRGRVLTDRVLAATTAAAAFDQPARDTLAQDMAAY 182
++FP LE AG + V+ ++H++GR L R+ A T D P + + Y
Sbjct 61 FLFPALEMAGVPREGGPIGVMLSEHEKGRGLAARLKEAVTGRQPGDAPDTAGAQRIIGEY 120
Query 183 IRMFEPHEAREDTVVFPALRDVMSAVEFRDMAETFEDEEHRRFGEAG---FQSVVDKV 237
+ + H A+E+ V+F + + + ++ E FE E R G F +++D++
Sbjct 121 VALLTQHIAKENMVLFAMADARLDSNKDAELYEAFEKLERERIGVGKHDEFHALLDRL 178
>gi|227872893|ref|ZP_03991198.1| hemerythrin HHE cation binding domain protein [Oribacterium sinus
F0268]
gi|227841273|gb|EEJ51598.1| hemerythrin HHE cation binding domain protein [Oribacterium sinus
F0268]
Length=191
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/179 (26%), Positives = 85/179 (48%), Gaps = 16/179 (8%)
Query 71 LMRE-HGVLKRILLIYREGIRRLQADDQSPAPALNESAQIIRRFIEDYHGQLEEQYVFP- 128
LM E H + R L + R +L + P E + +R + + +H EE+++FP
Sbjct 7 LMEEDHANINRALGVIRSICLQLMQGGEVPDEDFREIIEFVREYADKHHHGKEEKFLFPV 66
Query 129 ---KLEQAGKLTDITSVLRTQHQRGRVLTDRVLAATTAAAAFDQPARDTLAQDM----AA 181
KL G+ +T+ + +H GR VL+ TA + + R L D+ A
Sbjct 67 MVKKLGPVGEKL-VTNGMLVEHDLGRA---DVLSLETALNEYKKNPRLELKLDILSYAMA 122
Query 182 YIRMFEPHEAREDTVVFPALRDVMSAVEFRDMAE---TFEDEEHRRFGEAGFQSVVDKV 237
Y + + H +E++VV+P +S +F+D+ E FEDE+ + + + +++K+
Sbjct 123 YAHLLQLHIEKENSVVYPFAERGLSEEDFKDINEKSQIFEDEQTAKGVQKHYLDILEKL 181
>gi|337287945|ref|YP_004627417.1| Hemerythrin HHE cation binding domain-containing protein [Thermodesulfobacterium
sp. OPB45]
gi|334901683|gb|AEH22489.1| Hemerythrin HHE cation binding domain protein [Thermodesulfobacterium
sp. OPB45]
Length=186
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/164 (24%), Positives = 76/164 (47%), Gaps = 4/164 (2%)
Query 65 VTAPEDLMREHGVLKRILLIYREGIRRLQADDQSPAPALNESAQIIRRFIEDYHGQLEEQ 124
+ + E LM+EH +++R L + + RL+ + + R F + H EE+
Sbjct 1 MKSLELLMQEHRLIERGLALLKNIADRLERGESVSIEKVISLLDFFRVFADKCHHIKEEK 60
Query 125 YVFPKLEQAG--KLTDITSVLRTQHQRGRVLTDRVLAATTAAAAFDQPARDTLAQDMAAY 182
+FPKLE G + V+ +H++GR L +++ A + + AR Y
Sbjct 61 ALFPKLETRGIPREGGPIGVMLNEHEKGRTLQEQMRQALS--DFLEAKARQNFVSSAREY 118
Query 183 IRMFEPHEAREDTVVFPALRDVMSAVEFRDMAETFEDEEHRRFG 226
I + H +ED V+F + +++ + ++ ++FE E + G
Sbjct 119 ITLLSQHIWKEDNVLFQMAKQILNKSDDMELEKSFESYEQEQIG 162
>gi|313204560|ref|YP_004043217.1| hemerythrin hhe cation binding domain protein [Paludibacter propionicigenes
WB4]
gi|312443876|gb|ADQ80232.1| Hemerythrin HHE cation binding domain protein [Paludibacter propionicigenes
WB4]
Length=205
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/197 (23%), Positives = 82/197 (42%), Gaps = 8/197 (4%)
Query 51 GKGRPDTTPEQEVPVTAPEDLMREHGVLKRILLIYREGIRRLQADDQSPAPALNESAQII 110
G PD ++E+ TA ++L +H + R++ + + L D + ++I
Sbjct 11 GLNAPD--KKKELMNTATQNLENDHVYILRLIDVMERMVVTLSPD----LSGMELVVKLI 64
Query 111 RRFIEDYHGQLEEQYVFPKLEQAGKLTDI--TSVLRTQHQRGRVLTDRVLAATTAAAAFD 168
R++ + +H EE +FP + Q G + SV+ +H +GR + D
Sbjct 65 RQYADGFHHAKEENLLFPLMLQKGFSNEQGPISVMLQEHVQGRNFVKMMSEGIERYKQGD 124
Query 169 QPARDTLAQDMAAYIRMFEPHEAREDTVVFPALRDVMSAVEFRDMAETFEDEEHRRFGEA 228
A + + M YI + H +E+ V+F V+SA E + F E +G+
Sbjct 125 DTAIPPIYRAMQGYIDLLRAHIGKENNVLFRMADRVLSAAEQEHLLAEFAALETGSYGQG 184
Query 229 GFQSVVDKVADIEKSLG 245
Q + + +E G
Sbjct 185 KIQQFITDIEGLETVYG 201
>gi|78044507|ref|YP_359443.1| hypothetical protein CHY_0587 [Carboxydothermus hydrogenoformans
Z-2901]
gi|77996622|gb|ABB15521.1| conserved hypothetical protein [Carboxydothermus hydrogenoformans
Z-2901]
Length=188
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/186 (25%), Positives = 81/186 (44%), Gaps = 8/186 (4%)
Query 66 TAPEDLMREHGVLKRILLIYREGIRRLQADDQSPAPALNESAQIIRRFIEDYHGQLEEQY 125
E +++EH ++ R+L I G +L + P + IR F + +H EE
Sbjct 3 NCTEVMVKEHELILRMLDILETGADKLSRGEFVPPEVFTGAVIFIREFADRFHHGKEEDV 62
Query 126 VFPKLEQAGKLTDIT--SVLRTQHQRGRVLTDRVLAATTAAAAFDQPARDTLAQDMAAYI 183
FP L +AG + + +L +H+ GR R+ A D A + + Y+
Sbjct 63 FFPALYEAGMPEENSPQELLNLEHKLGRRFVGRLDEAAEQYMDGDDGAIPAVVEAARDYV 122
Query 184 RMFEPHEAREDTVVFPALRDVMSAVEFRDMAETFEDEEHRRFGE---AGFQSVVDK---V 237
R+ H +E+ +FP +MS + + + + E RF E F +V++ +
Sbjct 123 RLLRQHILKENEGLFPVAERLMSDSLKERVNQNYAEVERERFPEDTVLRFTQLVERFEHL 182
Query 238 ADIEKS 243
DI+K+
Sbjct 183 LDIKKN 188
>gi|150016719|ref|YP_001308973.1| hemerythrin HHE cation binding domain-containing protein [Clostridium
beijerinckii NCIMB 8052]
gi|149903184|gb|ABR34017.1| Hemerythrin HHE cation binding domain protein [Clostridium beijerinckii
NCIMB 8052]
Length=183
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 61/132 (47%), Gaps = 3/132 (2%)
Query 71 LMREHGVLKRILLIYREGIRRLQADDQSPAPALNESAQIIRRFIEDYHGQLEEQYVFPKL 130
+M EH +KR+L++ R+ RL ++ N IR F + +H + EE +F ++
Sbjct 7 MMEEHKYIKRMLVVVRKACFRLYKGEKISYDDFNSMIGFIRNFADSHHHKKEEVMLFNRM 66
Query 131 -EQAGKLTD--ITSVLRTQHQRGRVLTDRVLAATTAAAAFDQPARDTLAQDMAAYIRMFE 187
E+ G + + + +H GR+ + AA D+ A + + +Y + E
Sbjct 67 VEEIGPTAEKIVKHGMLVEHDLGRLHISELQAALKNLKNGDEEAILDVISNAISYTHLLE 126
Query 188 PHEAREDTVVFP 199
H +ED VV+
Sbjct 127 RHIDKEDKVVYT 138
>gi|153006000|ref|YP_001380325.1| hemerythrin HHE cation binding domain-containing protein [Anaeromyxobacter
sp. Fw109-5]
gi|152029573|gb|ABS27341.1| Hemerythrin HHE cation binding domain protein [Anaeromyxobacter
sp. Fw109-5]
Length=316
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/137 (26%), Positives = 68/137 (50%), Gaps = 7/137 (5%)
Query 66 TAPEDLMREHGVLKRILLIYREGIRRLQADDQSPAPALNESA-QIIRRFIEDYHGQLEEQ 124
T E LM +H +R+ + + A + P+P + + + + +++ H Q EEQ
Sbjct 4 TWRELLMTDHETTERVFSAAEKAL----AAPEGPSPGMVANLREYLVGYVDRCHNQKEEQ 59
Query 125 YVFPKLEQAGKLTDI--TSVLRTQHQRGRVLTDRVLAATTAAAAFDQPARDTLAQDMAAY 182
VFP L++AG + +V+ +H++ + L +R+ A A A D+ D L AY
Sbjct 60 TVFPLLQRAGLPVEGGPLAVMLAEHRQAKALVERIDGAAAAFVAGDRARLDDLRDAFGAY 119
Query 183 IRMFEPHEAREDTVVFP 199
+ + H +E+ +++P
Sbjct 120 AALCKDHFWKENDILYP 136
>gi|158520777|ref|YP_001528647.1| hemerythrin HHE cation binding domain-containing protein [Desulfococcus
oleovorans Hxd3]
gi|158509603|gb|ABW66570.1| Hemerythrin HHE cation binding domain protein [Desulfococcus
oleovorans Hxd3]
Length=177
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/151 (24%), Positives = 69/151 (46%), Gaps = 3/151 (1%)
Query 71 LMREHGVLKRILLIYREGIRRLQADDQSPAPALNESAQIIRRFIEDYHGQLEEQYVFPKL 130
LM EH ++++++ + ++ + R+Q + ++ + +R + + H EE +F L
Sbjct 7 LMIEHRLIEKMIALIKDALARIQMEGAVDPLFVDAAVDFVRTYADRTHHGKEEDILFHGL 66
Query 131 EQAGKLTD---ITSVLRTQHQRGRVLTDRVLAATTAAAAFDQPARDTLAQDMAAYIRMFE 187
++ + + L +H GR ++AA T DQ A +A +A + +
Sbjct 67 KEKKMSAEDRRMMDELIEEHVFGRTTVKSLVAANTRYRNGDQTALADIADCLATLVEFYP 126
Query 188 PHEAREDTVVFPALRDVMSAVEFRDMAETFE 218
H +ED V FPA R + E R + FE
Sbjct 127 KHIEKEDKVFFPASRAYFTEAEDRTLLAAFE 157
>gi|153005288|ref|YP_001379613.1| hemerythrin HHE cation binding domain-containing protein [Anaeromyxobacter
sp. Fw109-5]
gi|152028861|gb|ABS26629.1| Hemerythrin HHE cation binding domain protein [Anaeromyxobacter
sp. Fw109-5]
Length=202
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/144 (30%), Positives = 66/144 (46%), Gaps = 16/144 (11%)
Query 65 VTAPEDLMREHGVLKRIL---LIYREGIRRLQADDQSPAPALNESAQIIRRFIEDYHGQL 121
+ A E LM EH V++R+L + + E RR D++ L IR F + H
Sbjct 1 MDAIETLMNEHRVIERVLDALVGFAEEARRKGTGDKAE---LGRFVSFIREFADRCHHGK 57
Query 122 EEQYVFPKLEQAG--KLTDITSVLRTQHQRGRVLTDRVLAATTAAAAFDQPAR----DTL 175
EE +F + G + +V+ +H +GR L + A A AA D P T+
Sbjct 58 EEDILFAAMVAHGFPRNGGPVAVMLHEHAQGRAL----VGALAAKAAQDGPWTPADLQTI 113
Query 176 AQDMAAYIRMFEPHEAREDTVVFP 199
+ D AAY + H +ED +++P
Sbjct 114 SDDAAAYANLLHAHIHKEDAILYP 137
>gi|18313512|ref|NP_560179.1| hypothetical protein PAE2680 [Pyrobaculum aerophilum str. IM2]
gi|18161052|gb|AAL64361.1| conserved hypothetical protein [Pyrobaculum aerophilum str. IM2]
Length=180
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/167 (29%), Positives = 70/167 (42%), Gaps = 11/167 (6%)
Query 72 MREHGVLKRILLIYREGIRRLQADDQSPAP---ALNESAQIIRRFIEDYHGQLEEQYVFP 128
+REH +IL E + L SP+P A++ Q I+RF++ H +EE +F
Sbjct 13 LREHH--DKIL----EAVALLDKVLSSPSPDPEAVHFLIQFIQRFVDQCHHSIEEYILFQ 66
Query 129 KLEQAG--KLTDITSVLRTQHQRGRVLTDRVLAATTAAAAFDQPARDTLAQDMAAYIRMF 186
+ + G L V+ ++H GR L + TA DQ A LA YI
Sbjct 67 GVNRQGFPYLGSPIYVMTSEHGIGRYLARVMEELYTAWKNGDQNALKELADYAKLYIDHI 126
Query 187 EPHEAREDTVVFPALRDVMSAVEFRDMAETFEDEEHRRFGEAGFQSV 233
H +E+ V+FP L S V E E E + A + +
Sbjct 127 SEHIMKENNVLFPMLESSYSEVSSSRTVEDIEKENQHDYWMAKLEEL 173
>gi|335045378|ref|ZP_08538401.1| hemerythrin HHE cation binding domain protein [Oribacterium sp.
oral taxon 108 str. F0425]
gi|333759164|gb|EGL36721.1| hemerythrin HHE cation binding domain protein [Oribacterium sp.
oral taxon 108 str. F0425]
Length=187
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/160 (26%), Positives = 75/160 (47%), Gaps = 13/160 (8%)
Query 74 EHGVLKRILLIYREGIRRLQADDQSPAPALNESAQIIRRFIEDYHGQLEEQYVFPKL-EQ 132
EH + R L + R ++ + P + IR + + +H EE+++FP + +
Sbjct 11 EHSNINRALAVVRTICLQMMQGAEVPDDDFRQIIDFIRNYADKHHHGKEEKFLFPAMVAK 70
Query 133 AGKLTD--ITSVLRTQHQRGRVLTDRVLAATTAAAAFDQPARDTLAQDM----AAYIRMF 186
G + D +T + +H GR VLA TA + + L D+ AY +
Sbjct 71 MGPVADKLVTHGMLVEHDLGRA---DVLALETALNEYRKNPIPELKLDILSYAMAYAHLL 127
Query 187 EPHEAREDTVVFPALRDVMSAVEFRDM---AETFEDEEHR 223
+ H +E++VV+P +S +FRD+ +ET+E E+ +
Sbjct 128 QLHIEKENSVVYPFAERGLSEEDFRDINEKSETYEAEKKK 167
>gi|91772325|ref|YP_565017.1| hemerythrin HHE cation binding protein [Methanococcoides burtonii
DSM 6242]
gi|91711340|gb|ABE51267.1| HHE cation binding domain protein, Hemerythrin like [Methanococcoides
burtonii DSM 6242]
Length=183
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/179 (24%), Positives = 81/179 (46%), Gaps = 11/179 (6%)
Query 69 EDLMREHGVLKRILLIYREGIRRLQADDQSPAPALNESAQIIRRFIEDYHGQLEEQYVFP 128
+DL EH + +L I L++ + L + ++ F++ H EE+Y+FP
Sbjct 5 DDLKEEHHAVTLMLKILDGICTDLESGKEVKHEHLGNVVEFLKVFVDKCHHTKEEEYLFP 64
Query 129 KLEQA---GKLTDITSVLRTQHQRGRVLTDRVLAATTAAAAFDQPARDTLAQDMAAYIRM 185
+++A G D+ L +H+ GR + + + + D A T+ + YI +
Sbjct 65 AMKKAEIPGS-EDMIDSLLEEHEHGR--RNVRMISEAVSGNMDSEALSTIVRSSRDYIEL 121
Query 186 FEPHEAREDTVVFPALRDVMSAVEFR-DMAETFEDEEHRRFGEAG---FQSVVDKVADI 240
H +E+ +FP + D A E + D+ ++FE E + GE F ++ + D+
Sbjct 122 LTQHINKEENNLFP-MADEHLAQEIQVDLLKSFEIVEIEKIGEGKHEEFHKLLHSLRDV 179
>gi|224367197|ref|YP_002601360.1| putative fusion protein with hemerythrin HHE cation binding domain
[Desulfobacterium autotrophicum HRM2]
gi|223689913|gb|ACN13196.1| putative fusion protein with hemerythrin HHE cation binding domain
[Desulfobacterium autotrophicum HRM2]
Length=188
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/167 (26%), Positives = 78/167 (47%), Gaps = 18/167 (10%)
Query 85 YREGIRRLQADDQSPAPALNESAQIIRRFIEDYHGQL----EEQYVFPKL--EQAGKLTD 138
Y E R L ++ P+ ++A + F E+Y QL EE +F L ++ G++
Sbjct 20 YLEKARDLLEQNRQPSVDFFKTAVL---FFEEYADQLHHYKEEYLLFSVLASKKGGRIDL 76
Query 139 ITSVLRTQHQRGRVLTDRVLAATTAAAAFDQPARDTLAQDMAAYIRMFEPHEAREDTVVF 198
LR QH+ R ++ + T + A TL +++A YI + + H E+ + +
Sbjct 77 GIGSLRYQHELNRRCIKKIEDSLTGYEKCGEIATTTLLENLAVYISILKRHIFIENRLFY 136
Query 199 PALRDVMSAVEFRDMAETFEDEEHRRFGEAGF---QSVVDKVADIEK 242
P +S E R++ F++E EAG+ Q + D ++ ++K
Sbjct 137 PMAETELSEDEKRELKNQFDEE------EAGYNTRQMISDNLSRLQK 177
>gi|330826403|ref|YP_004389706.1| UspA domain-containing protein [Alicycliphilus denitrificans
K601]
gi|329311775|gb|AEB86190.1| UspA domain-containing protein [Alicycliphilus denitrificans
K601]
Length=339
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/138 (27%), Positives = 64/138 (47%), Gaps = 5/138 (3%)
Query 110 IRRFIEDYHGQLEEQYVFPKL-EQAGKLTDITSVLRTQHQRGRVLTDRVLAATTAAAAFD 168
IR F H EE+Y+F KL E+ L L QH R + + A A D
Sbjct 201 IREFPVALHHPKEEEYLFRKLRERTSALNPELDELERQHIRDEQMVRDLTAIVQQYADGD 260
Query 169 QPARDTLAQDMAAYIRMFEPHEAREDTVVFPALRDVMSAVEFRDMAETFEDEEHRRFG-- 226
+ A+D L + ++AY + H RE+ V+ P + ++ ++ ++ F RFG
Sbjct 261 KSAQD-LEKAVSAYAKFIWEHMGREEGVILPEAQHYLTEADWDEINAAFSQNRDPRFGGE 319
Query 227 -EAGFQSVVDKVADIEKS 243
+A F+ + ++ ++ K+
Sbjct 320 TDAEFKHLFSRIVNLAKT 337
>gi|284175675|ref|ZP_06389644.1| Hemerythrin HHE cation binding domain protein [Sulfolobus solfataricus
98/2]
Length=168
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/125 (25%), Positives = 59/125 (48%), Gaps = 15/125 (12%)
Query 110 IRRFIEDYHGQLEEQYVFPKLEQAGKLTDITSVLRTQHQRGRVLTDRVLAATTAAAAFDQ 169
++ F+++ H EE+ +F LE G + V+ +H + R + +R+ +++
Sbjct 23 MKNFVDNCHHVKEEKLLFDFLEHKGMVGGPIYVMAYEHNKLRDIINRI------EVKYNE 76
Query 170 PARDTLAQDMAAYIRMFEPHEAREDTVVFPALRDVMSAVE-------FRDMAETFEDEEH 222
P L +D+ I M H +E+ V+FP +++S E F + E F E H
Sbjct 77 PK--GLREDLNNLIVMLSSHIDKENNVLFPTAENLLSDDEDKIIYYKFERIEEGFGKERH 134
Query 223 RRFGE 227
R++ E
Sbjct 135 RKYIE 139
>gi|303242386|ref|ZP_07328870.1| Hemerythrin HHE cation binding domain protein [Acetivibrio cellulolyticus
CD2]
gi|302590064|gb|EFL59828.1| Hemerythrin HHE cation binding domain protein [Acetivibrio cellulolyticus
CD2]
Length=184
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/165 (22%), Positives = 71/165 (44%), Gaps = 4/165 (2%)
Query 71 LMREHGVLKRILLIYREGIRRLQADDQSPAPALNESAQIIRRFIEDYHGQLEEQYVFPKL 130
++ EH V+KR+L + R + + ++ +R + +++H EE+ +F K+
Sbjct 7 MVDEHIVIKRMLAVIRNACIGIMNGNNIDYDDFDKMIDFVRNYADNHHHGKEEKILFSKM 66
Query 131 --EQAGKLTDITSV-LRTQHQRGRVLTDRVLAATTAAAAFDQPARDTLAQDMAAYIRMFE 187
E G + + +H GR+ A A D A+ + + +Y +
Sbjct 67 IDEIGGAAEKLVRFGMLVEHDLGRLFMKDFEEALLAVKNGDNDAKVDVVANAVSYTHLLN 126
Query 188 PHEAREDTVVFPALRDVMSAVEFRDMAETFEDEEHRRFGEAGFQS 232
H +EDTV +P + +S+ + + D E + G++G Q
Sbjct 127 RHIDKEDTVAYPFAKRGLSSETLQKIDNECGDFE-KEMGKSGVQD 170
>gi|229578726|ref|YP_002837124.1| Hemerythrin HHE cation binding domain protein [Sulfolobus islandicus
Y.G.57.14]
gi|228009440|gb|ACP45202.1| Hemerythrin HHE cation binding domain protein [Sulfolobus islandicus
Y.G.57.14]
Length=161
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/126 (25%), Positives = 59/126 (47%), Gaps = 15/126 (11%)
Query 109 IIRRFIEDYHGQLEEQYVFPKLEQAGKLTDITSVLRTQHQRGRVLTDRVLAATTAAAAFD 168
++ F+++ H EE+ +F LE G + V+ +H + R + +R+ ++
Sbjct 15 FMKNFVDNCHHVKEEKLLFDFLEHKGMVGGPIYVMAYEHNKLRDIINRI------EVKYN 68
Query 169 QPARDTLAQDMAAYIRMFEPHEAREDTVVFPALRDVMSAVE-------FRDMAETFEDEE 221
+P L +D+ I M H +E+ V+FP +++S E F + E F E
Sbjct 69 EPK--GLREDLNNLIVMLSSHIDKENNVLFPTAENLLSDDEDKIIYYKFERIEEGFGKER 126
Query 222 HRRFGE 227
HR++ E
Sbjct 127 HRKYIE 132
>gi|229582516|ref|YP_002840915.1| Hemerythrin HHE cation binding domain protein [Sulfolobus islandicus
Y.N.15.51]
gi|228013232|gb|ACP48993.1| Hemerythrin HHE cation binding domain protein [Sulfolobus islandicus
Y.N.15.51]
Length=166
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/125 (25%), Positives = 59/125 (48%), Gaps = 15/125 (12%)
Query 110 IRRFIEDYHGQLEEQYVFPKLEQAGKLTDITSVLRTQHQRGRVLTDRVLAATTAAAAFDQ 169
++ F+++ H EE+ +F LE G + V+ +H + R + +R+ +++
Sbjct 21 MKNFVDNCHHVKEEKLLFDFLEHKGMVGGPIYVMAYEHNKLRDIINRI------EVKYNE 74
Query 170 PARDTLAQDMAAYIRMFEPHEAREDTVVFPALRDVMSAVE-------FRDMAETFEDEEH 222
P L +D+ I M H +E+ V+FP +++S E F + E F E H
Sbjct 75 PK--GLREDLNNLIVMLSSHIDKENNVLFPTAENLLSDDEDKIIYYKFERIEEGFGKERH 132
Query 223 RRFGE 227
R++ E
Sbjct 133 RKYIE 137
>gi|145590750|ref|YP_001152752.1| hemerythrin HHE cation binding domain-containing protein [Pyrobaculum
arsenaticum DSM 13514]
gi|145282518|gb|ABP50100.1| Hemerythrin HHE cation binding domain protein [Pyrobaculum arsenaticum
DSM 13514]
Length=180
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/167 (28%), Positives = 69/167 (42%), Gaps = 11/167 (6%)
Query 72 MREHGVLKRILLIYREGIRRLQADDQSPAP---ALNESAQIIRRFIEDYHGQLEEQYVFP 128
+REH +IL E + L SP+P A++ Q I+RF++ H +EE +F
Sbjct 13 LREHH--DKIL----EAVALLDKVLSSPSPDPEAVHFLIQFIQRFVDQCHHSIEEYVLFQ 66
Query 129 KLEQAG--KLTDITSVLRTQHQRGRVLTDRVLAATTAAAAFDQPARDTLAQDMAAYIRMF 186
+ + G L V+ ++H GR L + TA DQ A L YI
Sbjct 67 GVNRQGFPYLGSPIYVMTSEHGIGRYLARVMEELYTAWKNGDQNALKDLVDYARLYIDHI 126
Query 187 EPHEAREDTVVFPALRDVMSAVEFRDMAETFEDEEHRRFGEAGFQSV 233
H +E+ V+FP L S V E E E + A + +
Sbjct 127 SDHILKENNVLFPMLESSYSEVSSSRTVEDIEKENQHDYWMAKLEKL 173
>gi|227829789|ref|YP_002831568.1| Hemerythrin HHE cation binding domain protein [Sulfolobus islandicus
L.S.2.15]
gi|227456236|gb|ACP34923.1| Hemerythrin HHE cation binding domain protein [Sulfolobus islandicus
L.S.2.15]
Length=166
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/125 (25%), Positives = 59/125 (48%), Gaps = 15/125 (12%)
Query 110 IRRFIEDYHGQLEEQYVFPKLEQAGKLTDITSVLRTQHQRGRVLTDRVLAATTAAAAFDQ 169
++ F+++ H EE+ +F LE G + V+ +H + R + +R+ +++
Sbjct 21 MKNFVDNCHHVKEEKVLFDFLEHKGMVGGPIYVMAYEHNKLRDIINRI------EVKYNE 74
Query 170 PARDTLAQDMAAYIRMFEPHEAREDTVVFPALRDVMSAVE-------FRDMAETFEDEEH 222
P L +D+ I M H +E+ V+FP +++S E F + E F E H
Sbjct 75 PK--GLREDLNNLIVMLSSHIDKENNVLFPTAENLLSDDEDKIIYYKFERIEEGFGKERH 132
Query 223 RRFGE 227
R++ E
Sbjct 133 RKYIE 137
>gi|320353561|ref|YP_004194900.1| Hemerythrin HHE cation-binding domain-containing protein [Desulfobulbus
propionicus DSM 2032]
gi|320122063|gb|ADW17609.1| Hemerythrin HHE cation binding domain protein [Desulfobulbus
propionicus DSM 2032]
Length=184
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/166 (26%), Positives = 77/166 (47%), Gaps = 2/166 (1%)
Query 65 VTAPEDLMREHGVLKRILLIYREGIRRLQADDQSPAPALNESAQIIRRFIEDYHGQLEEQ 124
+ A ++L +EH ++ +L + R+L A++ L+ + F++ H EE+
Sbjct 1 MQATDELRKEHHGIQLMLQVLGVLGRKLGANEPVEQAHLDRMMEFFTVFVDHCHHGKEEE 60
Query 125 YVFPKLEQAG--KLTDITSVLRTQHQRGRVLTDRVLAATTAAAAFDQPARDTLAQDMAAY 182
Y+FP LE G + V+ +H RGRVL + A +A A D A+ A Y
Sbjct 61 YLFPALEAVGVPREGGPIGVMLNEHARGRVLVVGMQEALSALRAGDAAAKAAFASIAEEY 120
Query 183 IRMFEPHEAREDTVVFPALRDVMSAVEFRDMAETFEDEEHRRFGEA 228
+ H +E++V+F D + + ++ + FE E R G+
Sbjct 121 QTLLLQHIDKENSVLFVLAADKLDGNKDAELFQAFERLEEERIGQG 166
>gi|301059790|ref|ZP_07200684.1| hemerythrin HHE cation binding domain protein [delta proteobacterium
NaphS2]
gi|300446116|gb|EFK09987.1| hemerythrin HHE cation binding domain protein [delta proteobacterium
NaphS2]
Length=177
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/169 (24%), Positives = 80/169 (48%), Gaps = 6/169 (3%)
Query 71 LMREHGVLKRILLIYREGIRRLQADDQSPAPALNESAQIIRRFIEDYHGQLEEQYVFPKL 130
LM EH +++R++ I + + +++ + ++++ IR + + H EE +F L
Sbjct 7 LMIEHRLIERMIEIIKRMLHKVEIEKSVDPLLVDKTIDFIRIYADKTHHGKEENILFRAL 66
Query 131 EQAGKLTDITSVLR----TQHQRGRVLTDRVLAATTAAAAFDQPARDTLAQDMAAYIRMF 186
E+ L++ VL ++H GR T +++ A ++ A + ++ I +
Sbjct 67 EKKD-LSEKDQVLMEELISEHILGRETTKKLVEANDRYRNGNKSALSEIISNLGFLIDFY 125
Query 187 EPHEAREDTVVFPALRDVMSAVEFRDMAETFEDEEHRRFGEAGFQSVVD 235
H +ED V FP+ R S E + M E F E R+ ++SV++
Sbjct 126 PTHIEKEDKVFFPSARKYFSEEEDQAMLEEFW-EFDRQMIHEKYRSVIE 173
>gi|71906006|ref|YP_283593.1| ABC transporter [Dechloromonas aromatica RCB]
gi|71845627|gb|AAZ45123.1| amino acid/amide ABC transporter ATP-binding protein 2, HAAT
family [Dechloromonas aromatica RCB]
Length=437
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/136 (28%), Positives = 65/136 (48%), Gaps = 7/136 (5%)
Query 110 IRRFIEDYHGQLEEQYVFPKL-EQAGKLTDITSVLRTQHQRG-RVLTDRVLAATTAAAAF 167
I +F++ H E+ Y+FP L +A + I L+ +H G VL D L A AA A
Sbjct 46 IDQFMDRAHHAKEDSYLFPSLLRRAPEAAAIIERLQAEHHNGPEVLRD--LRAKLAATAA 103
Query 168 DQPARDTLAQDMAAYIRMFEPHEAREDTVVFPALRDVMSAVEFRDMAETFEDEEHRRFGE 227
A T + +Y + + H E+ V P R+ ++A ++ D+ + F D + FG
Sbjct 104 GSEANATFTAALRSYAQAVKSHVRSEEKDVMPLAREALTADDWADIDKAFLDNDDPLFGS 163
Query 228 ---AGFQSVVDKVADI 240
A F+ + ++ ++
Sbjct 164 KARAEFREIFHRIVNL 179
Lambda K H
0.317 0.132 0.370
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 374688414660
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40