BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv1998c
Length=258
Score E
Sequences producing significant alignments: (Bits) Value
gi|15609135|ref|NP_216514.1| hypothetical protein Rv1998c [Mycob... 522 2e-146
gi|31793178|ref|NP_855671.1| hypothetical protein Mb2021c [Mycob... 520 8e-146
gi|167970474|ref|ZP_02552751.1| hypothetical protein MtubH3_2155... 520 1e-145
gi|306776234|ref|ZP_07414571.1| hypothetical protein TMAG_02180 ... 519 1e-145
gi|340627009|ref|YP_004745461.1| hypothetical protein MCAN_20181... 476 2e-132
gi|289570098|ref|ZP_06450325.1| conserved hypothetical protein [... 465 3e-129
gi|119716266|ref|YP_923231.1| hypothetical protein Noca_2035 [No... 276 2e-72
gi|269124678|ref|YP_003298048.1| hypothetical protein Tcur_0410 ... 199 3e-49
gi|302528547|ref|ZP_07280889.1| predicted protein [Streptomyces ... 184 1e-44
gi|134097312|ref|YP_001102973.1| PEP phosphonomutase [Saccharopo... 183 3e-44
gi|256380190|ref|YP_003103850.1| PEP phosphonomutase-like protei... 173 3e-41
gi|302555033|ref|ZP_07307375.1| PEP phosphonomutase [Streptomyce... 172 5e-41
gi|300788190|ref|YP_003768481.1| PEP phosphonomutase [Amycolatop... 166 4e-39
gi|21224469|ref|NP_630248.1| hypothetical protein SCO6143 [Strep... 164 1e-38
gi|289768217|ref|ZP_06527595.1| conserved hypothetical protein [... 162 4e-38
gi|315505705|ref|YP_004084592.1| hypothetical protein ML5_4967 [... 157 1e-36
gi|229820515|ref|YP_002882041.1| hypothetical protein Bcav_2024 ... 157 2e-36
gi|271965898|ref|YP_003340094.1| PEP phosphonomutase [Streptospo... 155 4e-36
gi|345010720|ref|YP_004813074.1| PEP phosphonomutase [Streptomyc... 155 5e-36
gi|297157897|gb|ADI07609.1| hypothetical protein SBI_04489 [Stre... 154 9e-36
gi|345003080|ref|YP_004805934.1| hypothetical protein SACTE_5603... 154 1e-35
gi|319648780|ref|ZP_08002991.1| hypothetical protein HMPREF1012_... 153 2e-35
gi|291436460|ref|ZP_06575850.1| conserved hypothetical protein [... 151 9e-35
gi|52078915|ref|YP_077706.1| hypothetical protein BL01855 [Bacil... 150 3e-34
gi|29828645|ref|NP_823279.1| hypothetical protein SAV_2103 [Stre... 149 4e-34
gi|145594946|ref|YP_001159243.1| hypothetical protein Strop_2418... 146 2e-33
gi|300771293|ref|ZP_07081169.1| conserved hypothetical protein [... 146 3e-33
gi|227540507|ref|ZP_03970556.1| PEP phosphonomutase [Sphingobact... 140 2e-31
gi|297561594|ref|YP_003680568.1| PEP phosphonomutase [Nocardiops... 140 2e-31
gi|261407221|ref|YP_003243462.1| hypothetical protein GYMC10_341... 139 3e-31
gi|329930133|ref|ZP_08283752.1| hypothetical protein HMPREF9412_... 139 4e-31
gi|56965475|ref|YP_177207.1| hypothetical protein ABC3713 [Bacil... 139 4e-31
gi|302867890|ref|YP_003836527.1| hypothetical protein Micau_3423... 137 2e-30
gi|126651260|ref|ZP_01723470.1| hypothetical protein BB14905_013... 135 5e-30
gi|319652376|ref|ZP_08006492.1| hypothetical protein HMPREF1013_... 135 5e-30
gi|260775940|ref|ZP_05884836.1| probable carboxyvinyl-carboxypho... 135 6e-30
gi|260903988|ref|ZP_05912310.1| hypothetical protein BlinB_01557... 134 1e-29
gi|308070162|ref|YP_003871767.1| hypothetical protein PPE_03411 ... 133 2e-29
gi|312885279|ref|ZP_07744954.1| hypothetical protein VIBC2010_16... 132 4e-29
gi|342805718|gb|EGU40967.1| hypothetical protein VISP3789_17533 ... 132 4e-29
gi|323491274|ref|ZP_08096459.1| hypothetical protein VIBR0546_12... 132 7e-29
gi|310643312|ref|YP_003948070.1| protein [Paenibacillus polymyxa... 131 1e-28
gi|291455116|ref|ZP_06594506.1| conserved hypothetical protein [... 129 3e-28
gi|319651028|ref|ZP_08005163.1| hypothetical protein HMPREF1013_... 129 4e-28
gi|24214116|ref|NP_711597.1| 2-methylisocitrate lyase [Leptospir... 128 7e-28
gi|45658177|ref|YP_002263.1| hypothetical protein LIC12331 [Lept... 128 7e-28
gi|343501836|ref|ZP_08739704.1| hypothetical protein VITU9109_24... 127 1e-27
gi|148976052|ref|ZP_01812795.1| hypothetical protein VSWAT3_0710... 127 2e-27
gi|227327355|ref|ZP_03831379.1| hypothetical protein PcarcW_0854... 125 8e-27
gi|170756847|ref|YP_001780522.1| hypothetical protein CLD_3671 [... 125 8e-27
>gi|15609135|ref|NP_216514.1| hypothetical protein Rv1998c [Mycobacterium tuberculosis H37Rv]
gi|15841480|ref|NP_336517.1| hypothetical protein MT2054 [Mycobacterium tuberculosis CDC1551]
gi|148661812|ref|YP_001283335.1| hypothetical protein MRA_2014 [Mycobacterium tuberculosis H37Ra]
51 more sequence titles
Length=258
Score = 522 bits (1344), Expect = 2e-146, Method: Compositional matrix adjust.
Identities = 258/258 (100%), Positives = 258/258 (100%), Gaps = 0/258 (0%)
Query 1 MSFHDLHHQGVPFVLPNAWDVPSALAYLAEGFTAIGTTSFGVSSSGGHPDGHRATRGANI 60
MSFHDLHHQGVPFVLPNAWDVPSALAYLAEGFTAIGTTSFGVSSSGGHPDGHRATRGANI
Sbjct 1 MSFHDLHHQGVPFVLPNAWDVPSALAYLAEGFTAIGTTSFGVSSSGGHPDGHRATRGANI 60
Query 61 ALAAALAPLQCYVSVDIEDGYSDEPDAIADYVAQLSTAGINIEDSSAEKLIDPALAAAKI 120
ALAAALAPLQCYVSVDIEDGYSDEPDAIADYVAQLSTAGINIEDSSAEKLIDPALAAAKI
Sbjct 61 ALAAALAPLQCYVSVDIEDGYSDEPDAIADYVAQLSTAGINIEDSSAEKLIDPALAAAKI 120
Query 121 VAIKQRNPEVFVNARVDTYWLRQHADTTSTIQRALRYVDAGADGVFVPLANDPDELAELT 180
VAIKQRNPEVFVNARVDTYWLRQHADTTSTIQRALRYVDAGADGVFVPLANDPDELAELT
Sbjct 121 VAIKQRNPEVFVNARVDTYWLRQHADTTSTIQRALRYVDAGADGVFVPLANDPDELAELT 180
Query 181 RNIPCPVNTLPVPGLTIADLGELGVARVSTGSVPYSAGLYAAAHAARAVSDGEQLPRSVP 240
RNIPCPVNTLPVPGLTIADLGELGVARVSTGSVPYSAGLYAAAHAARAVSDGEQLPRSVP
Sbjct 181 RNIPCPVNTLPVPGLTIADLGELGVARVSTGSVPYSAGLYAAAHAARAVSDGEQLPRSVP 240
Query 241 YAELQARLVDYENRTSTT 258
YAELQARLVDYENRTSTT
Sbjct 241 YAELQARLVDYENRTSTT 258
>gi|31793178|ref|NP_855671.1| hypothetical protein Mb2021c [Mycobacterium bovis AF2122/97]
gi|121637882|ref|YP_978105.1| hypothetical protein BCG_2015c [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|224990376|ref|YP_002645063.1| hypothetical protein JTY_2010 [Mycobacterium bovis BCG str. Tokyo
172]
16 more sequence titles
Length=258
Score = 520 bits (1339), Expect = 8e-146, Method: Compositional matrix adjust.
Identities = 257/258 (99%), Positives = 257/258 (99%), Gaps = 0/258 (0%)
Query 1 MSFHDLHHQGVPFVLPNAWDVPSALAYLAEGFTAIGTTSFGVSSSGGHPDGHRATRGANI 60
MSFHDLHHQGVPFVLPNAWDVPSALAYLAEGFTAIGTTSFGVSSSGGHPDGHRATRGANI
Sbjct 1 MSFHDLHHQGVPFVLPNAWDVPSALAYLAEGFTAIGTTSFGVSSSGGHPDGHRATRGANI 60
Query 61 ALAAALAPLQCYVSVDIEDGYSDEPDAIADYVAQLSTAGINIEDSSAEKLIDPALAAAKI 120
ALAAALAPLQCYVSVDIEDGYSDEPDAIADYVAQLSTAGINIEDSSAEKLIDPALAAAKI
Sbjct 61 ALAAALAPLQCYVSVDIEDGYSDEPDAIADYVAQLSTAGINIEDSSAEKLIDPALAAAKI 120
Query 121 VAIKQRNPEVFVNARVDTYWLRQHADTTSTIQRALRYVDAGADGVFVPLANDPDELAELT 180
VAIKQRNPEVFVNARVDTYWLRQHADTTSTIQRALRYVDAGADGVFVPLANDPDELAELT
Sbjct 121 VAIKQRNPEVFVNARVDTYWLRQHADTTSTIQRALRYVDAGADGVFVPLANDPDELAELT 180
Query 181 RNIPCPVNTLPVPGLTIADLGELGVARVSTGSVPYSAGLYAAAHAARAVSDGEQLPRSVP 240
RNIPCPVNTLPVPGLTIADLGELGVARVSTGSVPYSAGLYAAAHAARAV DGEQLPRSVP
Sbjct 181 RNIPCPVNTLPVPGLTIADLGELGVARVSTGSVPYSAGLYAAAHAARAVRDGEQLPRSVP 240
Query 241 YAELQARLVDYENRTSTT 258
YAELQARLVDYENRTSTT
Sbjct 241 YAELQARLVDYENRTSTT 258
>gi|167970474|ref|ZP_02552751.1| hypothetical protein MtubH3_21558 [Mycobacterium tuberculosis
H37Ra]
Length=258
Score = 520 bits (1338), Expect = 1e-145, Method: Compositional matrix adjust.
Identities = 257/258 (99%), Positives = 257/258 (99%), Gaps = 0/258 (0%)
Query 1 MSFHDLHHQGVPFVLPNAWDVPSALAYLAEGFTAIGTTSFGVSSSGGHPDGHRATRGANI 60
MSFHDLHHQGVPFVLPNAWDVPS LAYLAEGFTAIGTTSFGVSSSGGHPDGHRATRGANI
Sbjct 1 MSFHDLHHQGVPFVLPNAWDVPSDLAYLAEGFTAIGTTSFGVSSSGGHPDGHRATRGANI 60
Query 61 ALAAALAPLQCYVSVDIEDGYSDEPDAIADYVAQLSTAGINIEDSSAEKLIDPALAAAKI 120
ALAAALAPLQCYVSVDIEDGYSDEPDAIADYVAQLSTAGINIEDSSAEKLIDPALAAAKI
Sbjct 61 ALAAALAPLQCYVSVDIEDGYSDEPDAIADYVAQLSTAGINIEDSSAEKLIDPALAAAKI 120
Query 121 VAIKQRNPEVFVNARVDTYWLRQHADTTSTIQRALRYVDAGADGVFVPLANDPDELAELT 180
VAIKQRNPEVFVNARVDTYWLRQHADTTSTIQRALRYVDAGADGVFVPLANDPDELAELT
Sbjct 121 VAIKQRNPEVFVNARVDTYWLRQHADTTSTIQRALRYVDAGADGVFVPLANDPDELAELT 180
Query 181 RNIPCPVNTLPVPGLTIADLGELGVARVSTGSVPYSAGLYAAAHAARAVSDGEQLPRSVP 240
RNIPCPVNTLPVPGLTIADLGELGVARVSTGSVPYSAGLYAAAHAARAVSDGEQLPRSVP
Sbjct 181 RNIPCPVNTLPVPGLTIADLGELGVARVSTGSVPYSAGLYAAAHAARAVSDGEQLPRSVP 240
Query 241 YAELQARLVDYENRTSTT 258
YAELQARLVDYENRTSTT
Sbjct 241 YAELQARLVDYENRTSTT 258
>gi|306776234|ref|ZP_07414571.1| hypothetical protein TMAG_02180 [Mycobacterium tuberculosis SUMu001]
gi|306972344|ref|ZP_07485005.1| hypothetical protein TMJG_00251 [Mycobacterium tuberculosis SUMu010]
gi|307080053|ref|ZP_07489223.1| hypothetical protein TMKG_00253 [Mycobacterium tuberculosis SUMu011]
gi|308215346|gb|EFO74745.1| hypothetical protein TMAG_02180 [Mycobacterium tuberculosis SUMu001]
gi|308358221|gb|EFP47072.1| hypothetical protein TMJG_00251 [Mycobacterium tuberculosis SUMu010]
gi|308362152|gb|EFP51003.1| hypothetical protein TMKG_00253 [Mycobacterium tuberculosis SUMu011]
Length=258
Score = 519 bits (1337), Expect = 1e-145, Method: Compositional matrix adjust.
Identities = 257/258 (99%), Positives = 257/258 (99%), Gaps = 0/258 (0%)
Query 1 MSFHDLHHQGVPFVLPNAWDVPSALAYLAEGFTAIGTTSFGVSSSGGHPDGHRATRGANI 60
MSFHDLHHQGVPFVLPNAWDVPSALAYLAEGFTAIGTTSFGVSSSGGHPDGHRATRGANI
Sbjct 1 MSFHDLHHQGVPFVLPNAWDVPSALAYLAEGFTAIGTTSFGVSSSGGHPDGHRATRGANI 60
Query 61 ALAAALAPLQCYVSVDIEDGYSDEPDAIADYVAQLSTAGINIEDSSAEKLIDPALAAAKI 120
ALAAALAPLQCYVSVDIEDGYSDEPDAIADYVAQLSTAGINIEDSSAEKLIDPALAAAKI
Sbjct 61 ALAAALAPLQCYVSVDIEDGYSDEPDAIADYVAQLSTAGINIEDSSAEKLIDPALAAAKI 120
Query 121 VAIKQRNPEVFVNARVDTYWLRQHADTTSTIQRALRYVDAGADGVFVPLANDPDELAELT 180
VAIKQRNPEVFVNARVDTYWLRQHADTTSTIQRALRYVDAGADGVFVPLANDPDELAELT
Sbjct 121 VAIKQRNPEVFVNARVDTYWLRQHADTTSTIQRALRYVDAGADGVFVPLANDPDELAELT 180
Query 181 RNIPCPVNTLPVPGLTIADLGELGVARVSTGSVPYSAGLYAAAHAARAVSDGEQLPRSVP 240
RNIPCPVNTLPVPGLTIADLGEL VARVSTGSVPYSAGLYAAAHAARAVSDGEQLPRSVP
Sbjct 181 RNIPCPVNTLPVPGLTIADLGELEVARVSTGSVPYSAGLYAAAHAARAVSDGEQLPRSVP 240
Query 241 YAELQARLVDYENRTSTT 258
YAELQARLVDYENRTSTT
Sbjct 241 YAELQARLVDYENRTSTT 258
>gi|340627009|ref|YP_004745461.1| hypothetical protein MCAN_20181 [Mycobacterium canettii CIPT
140010059]
gi|340005199|emb|CCC44350.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059]
Length=258
Score = 476 bits (1224), Expect = 2e-132, Method: Compositional matrix adjust.
Identities = 250/258 (97%), Positives = 252/258 (98%), Gaps = 0/258 (0%)
Query 1 MSFHDLHHQGVPFVLPNAWDVPSALAYLAEGFTAIGTTSFGVSSSGGHPDGHRATRGANI 60
MSFHDLHHQGVPFVLPNAWDVPSALAYLAEGFTAIGTTSFGVSSSGGHPDGHRATRGANI
Sbjct 1 MSFHDLHHQGVPFVLPNAWDVPSALAYLAEGFTAIGTTSFGVSSSGGHPDGHRATRGANI 60
Query 61 ALAAALAPLQCYVSVDIEDGYSDEPDAIADYVAQLSTAGINIEDSSAEKLIDPALAAAKI 120
ALAAALAPLQCYVSVDIEDGYSDEPDA+A+YVAQLSTAGINIEDSSAEKLIDPALAAAKI
Sbjct 61 ALAAALAPLQCYVSVDIEDGYSDEPDAVAEYVAQLSTAGINIEDSSAEKLIDPALAAAKI 120
Query 121 VAIKQRNPEVFVNARVDTYWLRQHADTTSTIQRALRYVDAGADGVFVPLANDPDELAELT 180
VAIKQRNPEVFVNARVDTYWLRQ ADT STIQRALRYVDAGADGVFVPLANDPDELAELT
Sbjct 121 VAIKQRNPEVFVNARVDTYWLRQDADTASTIQRALRYVDAGADGVFVPLANDPDELAELT 180
Query 181 RNIPCPVNTLPVPGLTIADLGELGVARVSTGSVPYSAGLYAAAHAARAVSDGEQLPRSVP 240
RNIP PVNTLPVPGLTIADLGELGVARVSTGSVPYSAGLYAAA AARAV DGE LPRSVP
Sbjct 181 RNIPRPVNTLPVPGLTIADLGELGVARVSTGSVPYSAGLYAAAQAARAVRDGEPLPRSVP 240
Query 241 YAELQARLVDYENRTSTT 258
YAELQARLVDYENRTSTT
Sbjct 241 YAELQARLVDYENRTSTT 258
>gi|289570098|ref|ZP_06450325.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
gi|289543852|gb|EFD47500.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
Length=239
Score = 465 bits (1196), Expect = 3e-129, Method: Compositional matrix adjust.
Identities = 233/235 (99%), Positives = 233/235 (99%), Gaps = 0/235 (0%)
Query 24 ALAYLAEGFTAIGTTSFGVSSSGGHPDGHRATRGANIALAAALAPLQCYVSVDIEDGYSD 83
ALAYLAEGFTAIGT SFGVSSSGGHPDGHRATRGANIALAAALAPLQCYVSVDIEDGYSD
Sbjct 5 ALAYLAEGFTAIGTPSFGVSSSGGHPDGHRATRGANIALAAALAPLQCYVSVDIEDGYSD 64
Query 84 EPDAIADYVAQLSTAGINIEDSSAEKLIDPALAAAKIVAIKQRNPEVFVNARVDTYWLRQ 143
EPDAIADYVAQLSTAGINIEDSSAEKLIDPALAAAKIVAIKQRNPEVFVNARVDTYWLRQ
Sbjct 65 EPDAIADYVAQLSTAGINIEDSSAEKLIDPALAAAKIVAIKQRNPEVFVNARVDTYWLRQ 124
Query 144 HADTTSTIQRALRYVDAGADGVFVPLANDPDELAELTRNIPCPVNTLPVPGLTIADLGEL 203
HADTTSTIQRALRYVDAGADGVFVPLANDPDELAELTRNIPCPVNTLPVPGLTIADLGEL
Sbjct 125 HADTTSTIQRALRYVDAGADGVFVPLANDPDELAELTRNIPCPVNTLPVPGLTIADLGEL 184
Query 204 GVARVSTGSVPYSAGLYAAAHAARAVSDGEQLPRSVPYAELQARLVDYENRTSTT 258
GVARVSTGSVPYSAGLYAAAHAARAV DGEQLPRSVPYAELQARLVDYENRTSTT
Sbjct 185 GVARVSTGSVPYSAGLYAAAHAARAVRDGEQLPRSVPYAELQARLVDYENRTSTT 239
>gi|119716266|ref|YP_923231.1| hypothetical protein Noca_2035 [Nocardioides sp. JS614]
gi|119536927|gb|ABL81544.1| conserved hypothetical protein [Nocardioides sp. JS614]
Length=255
Score = 276 bits (707), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 147/254 (58%), Positives = 182/254 (72%), Gaps = 3/254 (1%)
Query 1 MSFHDLHHQGVPFVLPNAWDVPSALAYLAEGFTAIGTTSFGVSSSGGHPDGHRATRGANI 60
MSF LHH +P +LPNAWDVPSA+A++ GF A+GTTSFGV++S GHPDG ATR AN
Sbjct 1 MSFRALHHAELPLLLPNAWDVPSAIAFVEAGFPAVGTTSFGVATSAGHPDGDGATRDANR 60
Query 61 ALAAALAPLQCYVSVDIEDGYSDEPDAIADYVAQLST---AGINIEDSSAEKLIDPALAA 117
LA LA L YVS+DIEDGYS++P+ +A YVA+L + AG+NIEDS A +L+DP A
Sbjct 61 VLAERLARLPAYVSIDIEDGYSEDPEEVAAYVAELGSYGVAGVNIEDSLAARLVDPTRQA 120
Query 118 AKIVAIKQRNPEVFVNARVDTYWLRQHADTTSTIQRALRYVDAGADGVFVPLANDPDELA 177
AK+ A+K+R+P+VFVNARVDTYW Q A +T++RAL YV AGADGVFVP DP +
Sbjct 121 AKLAAVKERSPDVFVNARVDTYWFDQDATVPATVERALAYVAAGADGVFVPGLTDPAAIR 180
Query 178 ELTRNIPCPVNTLPVPGLTIADLGELGVARVSTGSVPYSAGLYAAAHAARAVSDGEQLPR 237
E+ +P P+N L PGL + DL ELGV RVSTGS+PY A + AA AA AV DGEQ P
Sbjct 181 EIAAAVPAPLNLLVTPGLALRDLAELGVRRVSTGSLPYRAAVDAAVRAATAVRDGEQPPT 240
Query 238 SVPYAELQARLVDY 251
+ YAE R+ Y
Sbjct 241 ATSYAEANERVRRY 254
>gi|269124678|ref|YP_003298048.1| hypothetical protein Tcur_0410 [Thermomonospora curvata DSM 43183]
gi|268309636|gb|ACY96010.1| conserved hypothetical protein [Thermomonospora curvata DSM 43183]
Length=258
Score = 199 bits (507), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 122/250 (49%), Positives = 158/250 (64%), Gaps = 0/250 (0%)
Query 3 FHDLHHQGVPFVLPNAWDVPSALAYLAEGFTAIGTTSFGVSSSGGHPDGHRATRGANIAL 62
F +LH G P VLPNAWDV SA+A A GF A+GTTS GV++ G D RA L
Sbjct 5 FGELHRAGDPLVLPNAWDVASAVALAAAGFAAVGTTSLGVAARYGMADASRAIAEPVRRL 64
Query 63 AAALAPLQCYVSVDIEDGYSDEPDAIADYVAQLSTAGINIEDSSAEKLIDPALAAAKIVA 122
A L L C VSVDI DG++DEP+A+A+Y A L G+NIEDS+A +L+ + AAKI A
Sbjct 65 AHRLRRLPCPVSVDIADGFADEPEAVAEYAASLGVDGVNIEDSTAGRLVPVEVHAAKIAA 124
Query 123 IKQRNPEVFVNARVDTYWLRQHADTTSTIQRALRYVDAGADGVFVPLANDPDELAELTRN 182
+K+R P +FVNARVDT+W+ Q A T+TI RA+RYV+AGADGVFVP D ++ ++T
Sbjct 125 VKERCPGLFVNARVDTFWVGQDATVTATIDRAVRYVEAGADGVFVPGRLDGAQIRQITSA 184
Query 183 IPCPVNTLPVPGLTIADLGELGVARVSTGSVPYSAGLYAAAHAARAVSDGEQLPRSVPYA 242
+P PVN L ++A+L LGV RVS GS+ Y A L A A + DG P + Y
Sbjct 185 VPVPVNVLASSDFSVAELARLGVRRVSCGSLLYRAALDRAVEVAVGLRDGSPAPPATSYG 244
Query 243 ELQARLVDYE 252
++Q Y
Sbjct 245 DVQELATRYR 254
>gi|302528547|ref|ZP_07280889.1| predicted protein [Streptomyces sp. AA4]
gi|302437442|gb|EFL09258.1| predicted protein [Streptomyces sp. AA4]
Length=254
Score = 184 bits (466), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 111/252 (45%), Positives = 150/252 (60%), Gaps = 6/252 (2%)
Query 2 SFHDLHHQGVPFVLPNAWDVPSALAYLAEGFTAIGTTSFGVSSSGGHPDGHRATRGANIA 61
SF LH G P +LPN W+ A A A G A+GTTS GVS++ G DG A+R A +A
Sbjct 3 SFAALHVPGRPLLLPNVWEFGFAAALAAAGHPAVGTTSLGVSAAAGLADGAPASRAATVA 62
Query 62 LAAALAPLQCYVSVDIEDGYSDEPDAIADYVAQLSTA---GINIEDSSAEKLIDPALAAA 118
LA +LAPL VSVD+ DG+S +P +AD VA+L+ A G+N+EDS + L + AA
Sbjct 63 LAKSLAPLDILVSVDLADGFSADPAEVADLVAELADAGVVGVNLEDSRGDTLAPIVVQAA 122
Query 119 KIVAIKQRNPEVFVNARVDTYWLRQHADTTSTIQRALRYVDAGADGVFVPLANDPDELAE 178
+ +++R P +F+NAR DT+WL + R Y DAGAD VFVP ++ ++AE
Sbjct 123 LLAKVRERVPGMFLNARTDTHWLGT-GPVADAVTRVRAYADAGADCVFVPGLHESADVAE 181
Query 179 LTRNIPCPVNTLPVPG-LTIADLGELGVARVSTGSVPYSAGLYAAAHAARAVSDGEQLPR 237
L ++ PVN L +PG T ++L LGVARVS GS PY L AA + +G +LP
Sbjct 182 LVESVEVPVNLLHLPGKATFSELASLGVARVSLGSTPYRVALSAALATVDSAREGRELPM 241
Query 238 SVP-YAELQARL 248
P Y E+ A L
Sbjct 242 KPPSYGEITALL 253
>gi|134097312|ref|YP_001102973.1| PEP phosphonomutase [Saccharopolyspora erythraea NRRL 2338]
gi|291009395|ref|ZP_06567368.1| PEP phosphonomutase [Saccharopolyspora erythraea NRRL 2338]
gi|2327015|gb|AAC45579.1| unknown [Saccharopolyspora erythraea NRRL 2338]
gi|133909935|emb|CAM00047.1| PEP phosphonomutase [Saccharopolyspora erythraea NRRL 2338]
Length=266
Score = 183 bits (464), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 109/251 (44%), Positives = 150/251 (60%), Gaps = 4/251 (1%)
Query 3 FHDLHHQGVPFVLPNAWDVPSALAYLAEGFTAIGTTSFGVSSSGGHPDGHRATRGANIAL 62
F LH G P +LPNAWD+ SA A A GF A+GTTS GV+++ G PD A + +AL
Sbjct 8 FRALHRAGDPLLLPNAWDLASAAALAAAGFPAVGTTSLGVAAAHGLPDAEGAAKSETLAL 67
Query 63 AAALAPLQCYVSVDIEDGYSDEPDAIADYVAQLSTAGINIEDSSAEKLIDPALAAAKIVA 122
A L L C V+VD E G+ D P A+A +A+ AG+N+ED + DPA AA +
Sbjct 68 ARRLVRLPCLVTVDAEAGFGD-PVAVAVELAEAGVAGMNLEDGRPGGMADPAEQAAMLRE 126
Query 123 IKQRNPEVFVNARVDTYWLRQHADTTSTIQRALRYVDAGADGVFVPLANDPDELAELTRN 182
+K PE+F+NAR+DT+WLR+ + ++RA RY DAGADGVFVP DPD++ L +
Sbjct 127 VKHHAPELFLNARIDTHWLREPG-VPAMLERARRYEDAGADGVFVPGLTDPDDIRTLVAS 185
Query 183 IPCPVNTLPVPGLTIADLGELGVARVSTGSVPYSAGLYAAAHAARAVSDGEQLPRSVP-Y 241
+ PVN L P T +L +LGV R+STGS+ Y ++ A + AR G +V Y
Sbjct 186 VALPVNVLCPPAGT-GNLADLGVRRISTGSLLYRTAVHTAVNTARGTLGGRAPQGAVAGY 244
Query 242 AELQARLVDYE 252
E +A + D +
Sbjct 245 EEFEAMVRDAQ 255
>gi|256380190|ref|YP_003103850.1| PEP phosphonomutase-like protein [Actinosynnema mirum DSM 43827]
gi|255924493|gb|ACU40004.1| PEP phosphonomutase-like protein [Actinosynnema mirum DSM 43827]
Length=425
Score = 173 bits (438), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 107/245 (44%), Positives = 137/245 (56%), Gaps = 4/245 (1%)
Query 2 SFHDLHHQGVPFVLPNAWDVPSALAYLAEGFTAIGTTSFGVSSSGGHPDGHRATRGANIA 61
+FH LHH P +LPNAWD SA A GF+A+GTTS GV+++ G PD + +A
Sbjct 180 AFHRLHHADTPLLLPNAWDSASATALAEAGFSAVGTTSLGVAAAAGLPDAEGRAKAETLA 239
Query 62 LAAALAPLQCYVSVDIEDGYSDEPDAIADYVAQLSTAGINIEDSSAEKLIDPALAAAKIV 121
LA + L V+VD+E G+ +P +A + L AGIN+ED + L DPA A I
Sbjct 240 LARRITHLPVPVTVDVEAGFGADPADLAAELHALGVAGINVEDGRGDHLADPAAQADLIR 299
Query 122 AIKQRNPEVFVNARVDTYWLRQHADTTSTIQRALRYVDAGADGVFVPLANDPDELAELTR 181
K P +FVNARVD +WL D S + RALRY DAGADGVF+P DP +
Sbjct 300 RAKAAAPALFVNARVDCHWL--GIDRASALDRALRYADAGADGVFLPGLADPAGIERAVA 357
Query 182 NIPCPVNTLPVPGLTIADLGELGVARVSTGSVPYSAGLYAAAHAARAVSDGEQLPRSVPY 241
+P P+N L L + L +LGV RVSTGS+ + A L AA A A DG P Y
Sbjct 358 ALPVPLNLLAQ--LDLRTLTDLGVKRVSTGSLLFRAALGAAVATAEAFRDGLPTPEVPSY 415
Query 242 AELQA 246
+QA
Sbjct 416 ERVQA 420
>gi|302555033|ref|ZP_07307375.1| PEP phosphonomutase [Streptomyces viridochromogenes DSM 40736]
gi|302472651|gb|EFL35744.1| PEP phosphonomutase [Streptomyces viridochromogenes DSM 40736]
Length=282
Score = 172 bits (435), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 109/253 (44%), Positives = 144/253 (57%), Gaps = 13/253 (5%)
Query 2 SFHDLHHQGVPFVLPNAWDVPSALAYLAEGFTAIGTTSFGVSSSGGHPDGHRATRGANIA 61
+F DLH P +LPNAWD SA A+G+ AI TTS GV++ G PD ATR +
Sbjct 34 AFADLHRAEEPLLLPNAWDCASARMLAAQGYRAIATTSLGVAAVAGLPDAVAATRDETLR 93
Query 62 LAAALAPLQCYVSVDIEDGYSDEPDAIADYVAQL---STAGINIEDSSA--EKLIDPALA 116
LA AL +SVD E+G+SD+PD +A++ +L AGIN+ED ++L
Sbjct 94 LAHALGSEPFLLSVDAEEGFSDDPDEVAEFARELYAVGVAGINLEDGCGPVDRL------ 147
Query 117 AAKIVAIKQRNPEVFVNARVDTYWLRQHADTTSTIQRALRYVDAGADGVFVPLANDPDEL 176
AAKI A+K+ P +FVNAR DT+WLR+ D T T+ R Y AGADGVFVP D ++
Sbjct 148 AAKITAVKRAAPGLFVNARTDTHWLRE-GDLTDTLTRLDAYRRAGADGVFVPGLTDLRQI 206
Query 177 AELTRNIPCPVNTL-PVPGLTIADLGELGVARVSTGSVPYSAGLYAAAHAARAVSDGEQL 235
A L R++ P+N L G ++A+ E GV RVS GS+ Y L AA A + G
Sbjct 207 ATLVRHLDVPLNVLHSQGGPSVAEFAEAGVRRVSVGSLLYRRALGAALEAMADIRAGRTP 266
Query 236 PRSVPYAELQARL 248
+ P E ARL
Sbjct 267 SGAAPSYEEVARL 279
>gi|300788190|ref|YP_003768481.1| PEP phosphonomutase [Amycolatopsis mediterranei U32]
gi|299797704|gb|ADJ48079.1| putative PEP phosphonomutase [Amycolatopsis mediterranei U32]
gi|340529775|gb|AEK44980.1| PEP phosphonomutase [Amycolatopsis mediterranei S699]
Length=254
Score = 166 bits (419), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 114/253 (46%), Positives = 153/253 (61%), Gaps = 10/253 (3%)
Query 3 FHDLHHQGVPFVLPNAWDVPSALAYLAEGFTAIGTTSFGVSSSGGHPDGHRATRGANIAL 62
F LH G P +LPNAW+ A+GF A+GTTS GVS++ G PDG +TR A +AL
Sbjct 4 FRALHVPGSPLLLPNAWEFGVGAFLAAQGFRALGTTSLGVSAAAGEPDGAPSTRDATVAL 63
Query 63 AAALAPLQCYVSVDIEDGYSDEPDAI---ADYVAQLSTAGINIEDSSAE-KLIDPALAAA 118
A LA L VSVDI DG+S +P A+ A +A+ G+N+ED A+ L + A
Sbjct 64 ATRLARLDALVSVDIADGFSADPAAVADLAAELAEAGVVGVNLEDGRADGSLATVDVQCA 123
Query 119 KIVAIKQRNPEVFVNARVDTYWLRQHADTTSTIQRALR-YVDAGADGVFVPLANDPDELA 177
+ A+K+R P +FVNAR DT+W+ + + +R +R Y AGADGVFVP +P ++
Sbjct 124 LVTAVKERVPGLFVNARADTHWVGDR--SLAEAERRVRAYAAAGADGVFVPGLAEPADV- 180
Query 178 ELTRNIPCPVNTLPVPG-LTIADLGELGVARVSTGSVPYSAGLYAAAHAARAVSDGEQLP 236
E P+N L +PG +T+A L ELGVAR+S GS+PY L AAA A AV DG LP
Sbjct 181 ECIVGAGLPLNLLFLPGKVTVAGLAELGVARISLGSLPYRMALAAAAETALAVRDGRDLP 240
Query 237 RSVP-YAELQARL 248
+ P YA++ A L
Sbjct 241 LNPPSYADVTALL 253
>gi|21224469|ref|NP_630248.1| hypothetical protein SCO6143 [Streptomyces coelicolor A3(2)]
gi|4007692|emb|CAA22377.1| conserved hypothetical protein SC1A9.07 [Streptomyces coelicolor
A3(2)]
Length=251
Score = 164 bits (415), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 98/218 (45%), Positives = 125/218 (58%), Gaps = 9/218 (4%)
Query 2 SFHDLHHQGVPFVLPNAWDVPSALAYLAEGFTAIGTTSFGVSSSGGHPDGHRATRGANIA 61
+F LH G P +LP AWD SA A +GF A+GTTS GV+++ G PDG ATR +
Sbjct 5 AFAALHRAGEPLLLPCAWDHASAFALAGQGFRAVGTTSLGVAAAAGLPDGASATRDETLR 64
Query 62 LAAALAPLQCYVSVDIEDGYSDEPDAIADYVAQLS---TAGINIEDSSAEKLIDPALAAA 118
LA L +SVD EDG+SD+PD + ++ QL+ GIN+ED L AA
Sbjct 65 LALVLGSAPFPLSVDAEDGFSDDPDEVGEFARQLAAVGAVGINLEDG----LGPVGRHAA 120
Query 119 KIVAIKQRNPEVFVNARVDTYWLRQHADTTSTIQRALRYVDAGADGVFVPLANDPDELAE 178
KI A++ P +FVNAR DTYW D T T++R Y +AGADGVFVP DP +
Sbjct 121 KIAAVRSAAPGLFVNARTDTYW-SGDGDVTETLRRLEAYREAGADGVFVPGLTDPARIGS 179
Query 179 LTRNIPCPVNTLPVP-GLTIADLGELGVARVSTGSVPY 215
L P+N L P G +A L +LGV RVS GS+ Y
Sbjct 180 LAARFDVPLNVLYTPAGPGLAHLADLGVRRVSLGSLLY 217
>gi|289768217|ref|ZP_06527595.1| conserved hypothetical protein [Streptomyces lividans TK24]
gi|289698416|gb|EFD65845.1| conserved hypothetical protein [Streptomyces lividans TK24]
Length=251
Score = 162 bits (411), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 97/218 (45%), Positives = 124/218 (57%), Gaps = 9/218 (4%)
Query 2 SFHDLHHQGVPFVLPNAWDVPSALAYLAEGFTAIGTTSFGVSSSGGHPDGHRATRGANIA 61
+F LH G P +LP AWD SA A +GF A+GTTS GV+++ G PDG ATR +
Sbjct 5 AFAALHRAGEPLLLPCAWDHASAFALAGQGFRAVGTTSLGVAAAAGLPDGASATRDETLR 64
Query 62 LAAALAPLQCYVSVDIEDGYSDEPDAIADYVAQLS---TAGINIEDSSAEKLIDPALAAA 118
LA L +SVD EDG+SD+PD + ++ QL+ GIN+ED L AA
Sbjct 65 LALVLGSAPFPLSVDAEDGFSDDPDEVGEFARQLAAVGAVGINLEDG----LGPVGRHAA 120
Query 119 KIVAIKQRNPEVFVNARVDTYWLRQHADTTSTIQRALRYVDAGADGVFVPLANDPDELAE 178
KI A++ P +FVNAR DTYW D T++R Y +AGADGVFVP DP +
Sbjct 121 KIAAVRSAAPGLFVNARTDTYW-SGDGDVKETLRRLEAYREAGADGVFVPGLTDPARIGS 179
Query 179 LTRNIPCPVNTLPVP-GLTIADLGELGVARVSTGSVPY 215
L P+N L P G +A L +LGV RVS GS+ Y
Sbjct 180 LAARFDVPLNVLYTPAGPGLAHLADLGVRRVSLGSLLY 217
>gi|315505705|ref|YP_004084592.1| hypothetical protein ML5_4967 [Micromonospora sp. L5]
gi|315412324|gb|ADU10441.1| hypothetical protein ML5_4967 [Micromonospora sp. L5]
Length=264
Score = 157 bits (398), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 110/253 (44%), Positives = 145/253 (58%), Gaps = 10/253 (3%)
Query 2 SFHDLHHQGVPFVLPNAWDVPSALAYLAEGFTAIGTTSFGVSSSGGHPDGHRATRGANIA 61
+F DLH +G P +LPNAWD SA A A G AIGTTS GV+++ G PD RATR +
Sbjct 7 AFRDLHRRGEPLLLPNAWDHASAAALAARGHQAIGTTSLGVAAAAGRPDAVRATRTETLE 66
Query 62 LAAALAPLQCYVSVDIEDGYSDEPDAIADYVAQLS---TAGINIEDSSAEKLIDP-ALAA 117
LA L L ++VD+EDG+ D+P +A +V +L+ G+N+ED + + P A
Sbjct 67 LAYRLRNLPALLTVDVEDGFHDDPAEVARFVGELAALGVVGVNVEDGRPDGRLAPAEHVA 126
Query 118 AKIVAIKQRNPEVFVNARVDTYWLRQHADTTSTIQRALRYVDAGADGVFVPLANDPDEL- 176
A I A++ P++FVNAR D +WL + +RA + DAGAD +FVP A PDEL
Sbjct 127 AVIAAVRAAVPQIFVNARTDAWWLGVPSPLDEARRRAALFRDAGADCLFVPGA--PDELV 184
Query 177 AELTRNIPCPVNTLPVP-GLTIADLGELGVARVSTGSVPYSAGLYAAAHAARAVSDGEQ- 234
L P+N L P G +A LG LGVARVSTGS+ + A L A H A+ G
Sbjct 185 GVLAAEAGLPLNVLYRPGGPDLAALGRLGVARVSTGSLLFRAALGTALHLTDAIGAGRDA 244
Query 235 -LPRSVPYAELQA 246
LP Y E+QA
Sbjct 245 GLPAPPTYEEVQA 257
>gi|229820515|ref|YP_002882041.1| hypothetical protein Bcav_2024 [Beutenbergia cavernae DSM 12333]
gi|229566428|gb|ACQ80279.1| conserved hypothetical protein [Beutenbergia cavernae DSM 12333]
Length=274
Score = 157 bits (396), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 104/251 (42%), Positives = 136/251 (55%), Gaps = 18/251 (7%)
Query 3 FHDLHHQGVPFVLPNAWDVPSALAYLAEGFTAIGTTSFGVSSSGGHPDGHRATRGANIAL 62
F H G P +LPNAWD+ SA + GF +GTTS GV+ + G PDG A AL
Sbjct 6 FRRRHRPGAPLLLPNAWDLASARWLVGAGFDVVGTTSLGVAFAAGKPDGSGAIAEETSAL 65
Query 63 AAALAPLQCYVSVDIEDGYSDEPDAIADY---VAQLSTAGINIEDSSAE-KLIDPALAAA 118
A+ L V+VDIE G+SD+PD + Y +A L G+N+EDS L+D LA A
Sbjct 66 ASTLTRAGIAVTVDIEAGFSDDPDDVGRYASRLAALGVVGLNLEDSDGRGGLVDVDLAVA 125
Query 119 KIVAIKQRNPEVFVNARVDTYWLRQH-------ADTTSTIQRALRYVDAGADGVFVPLAN 171
K+ A+ PEVF+NAR D +WL + A + ++R + YV AGA GVFVP A
Sbjct 126 KVAAVAHAAPEVFLNARTDPFWLARGDPAADLAAAEGTALERGVAYVAAGASGVFVPGAL 185
Query 172 DPDELAELTRNIPCPVNTLPVPGLTIADLGELGVARVSTGSVPYSAGLYAAAHAARAVSD 231
P + L +P P+N L L +A+L GVARVSTGS+ + + L AV D
Sbjct 186 PPATMRTLAAQLPAPLNVLVQERLGVAELARSGVARVSTGSLLFRSALA-------AVRD 238
Query 232 GEQLPRSVPYA 242
G R VP A
Sbjct 239 GAAALRGVPPA 249
>gi|271965898|ref|YP_003340094.1| PEP phosphonomutase [Streptosporangium roseum DSM 43021]
gi|270509073|gb|ACZ87351.1| PEP phosphonomutase [Streptosporangium roseum DSM 43021]
Length=264
Score = 155 bits (393), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 109/249 (44%), Positives = 140/249 (57%), Gaps = 3/249 (1%)
Query 3 FHDLHHQGVPFVLPNAWDVPSALAYLAEGFTAIGTTSFGVSSSGGHPDGHRATRGANIAL 62
F LHH P +LPNAWD SA A A GF A+ TTS GV+++ G PD +AT + L
Sbjct 6 FRALHHGPEPLLLPNAWDHASAAALAAAGFAAVATTSLGVAAAAGLPDAEQATWAQTVTL 65
Query 63 AAALAPLQCYVSVDIEDGYSDEPDAIADYVAQLSTA---GINIEDSSAEKLIDPALAAAK 119
A +A L V+VDIE G+ P +A+ A+L+ A G+NIED + L + A A
Sbjct 66 ARGIATLGVPVTVDIEGGFGGPPARVAERAAELAAAGVAGVNIEDGRGQGLAEVAEQVAL 125
Query 120 IVAIKQRNPEVFVNARVDTYWLRQHADTTSTIQRALRYVDAGADGVFVPLANDPDELAEL 179
I AIKQR P +FVNAR D +WLR + + R Y DAGADGVFVP A E+ L
Sbjct 126 IGAIKQRVPRLFVNARTDPFWLRAPDALATAVHRVRAYADAGADGVFVPGAYGEPEVQAL 185
Query 180 TRNIPCPVNTLPVPGLTIADLGELGVARVSTGSVPYSAGLYAAAHAARAVSDGEQLPRSV 239
P P+N L P + +A L LGVAR+S GS+ + A L AA A V+ G +P +
Sbjct 186 AAAAPVPLNVLIQPQVPVARLAALGVARISYGSLLFRAALRAAVTTALQVAAGAPVPGDL 245
Query 240 PYAELQARL 248
P E RL
Sbjct 246 PSYEQVQRL 254
>gi|345010720|ref|YP_004813074.1| PEP phosphonomutase [Streptomyces violaceusniger Tu 4113]
gi|344037069|gb|AEM82794.1| PEP phosphonomutase [Streptomyces violaceusniger Tu 4113]
Length=295
Score = 155 bits (393), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 96/229 (42%), Positives = 130/229 (57%), Gaps = 11/229 (4%)
Query 2 SFHDLHHQGVPFVLPNAWDVPSALAYLAEGFTAIGTTSFGVSSSGGHPDGHRATRGANIA 61
+F LHH P +LPNAWD SA A + GF AIGTTS GV+++ G PD A R +A
Sbjct 15 AFRRLHHGDRPLLLPNAWDHASAAALVRRGFPAIGTTSLGVAAAAGLPDATGAARDETLA 74
Query 62 LAAALAPLQCYVSVDIEDGYSDEPDAIADYVAQLSTA---GINIEDSSAEKLIDP-ALAA 117
LA +A L VSVDIE G+ + P+ +A VA+L A G+NIED + + P A
Sbjct 75 LARGIARLPALVSVDIEGGFGERPEEVAALVAELDRAGVVGVNIEDGRPDGTLAPLAHQC 134
Query 118 AKIVAIKQRNPEVFVNARVDTYWLRQHA-----DTTSTIQRALRYVDAGADGVFVPLAND 172
A + A+K+R P +FVNAR D +WL ++ +R YV AGADG+FVP D
Sbjct 135 AVLAAVKERVPRLFVNARTDAHWLAAIGGGAPPSLSAAAERIEAYVQAGADGIFVPALTD 194
Query 173 PDELAELTRNI-PCPVNTLPVPGL-TIADLGELGVARVSTGSVPYSAGL 219
++ L ++ P+N L PG + L ELGV R+S GS+ + A L
Sbjct 195 EYDIGALADDLGETPLNILFTPGRHSYERLAELGVRRISCGSLLFRAAL 243
>gi|297157897|gb|ADI07609.1| hypothetical protein SBI_04489 [Streptomyces bingchenggensis
BCW-1]
Length=523
Score = 154 bits (390), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 121/252 (49%), Positives = 150/252 (60%), Gaps = 9/252 (3%)
Query 2 SFHDLHHQG-VPFVLPNAWDVPSALAYLAEGFTAIGTTSFGVSSSGGHPDGHRATRGANI 60
+F LHHQ P +LPNAWD SA A A GF A+GTTS GV+++ G PDG AT A +
Sbjct 270 AFARLHHQAATPLLLPNAWDYASAAALAARGFPAVGTTSLGVAAATGLPDGAAATVDATL 329
Query 61 ALAAALAPLQCYVSVDIEDGYSD---EPDAIADYVAQLSTAGINIEDSSAEKLIDPA-LA 116
ALA +L +VD E G+SD E A+A + AGIN+ED A+ + P L
Sbjct 330 ALARSLGRGSFLFTVDAEGGFSDDVAEVAALAHELYDAGAAGINLEDGRADGTLAPVELH 389
Query 117 AAKIVAIKQRNPEVFVNARVDTYWLRQHADTTSTIQRALRYVDAGADGVFVPLANDPDEL 176
AAKI A+K P +FVNAR DT+WL + D T+ R Y AGADGVFVP +DPD +
Sbjct 390 AAKIAAVKAAVPALFVNARTDTHWLGRQEDETAA--RLASYEQAGADGVFVPGLSDPDGI 447
Query 177 AELTRNIPCPVNTLPVP-GLTIADLGELGVARVSTGSVPYSAGLYAAAHAARAVSDGEQL 235
A LT + P+N L P G T+A+L LGV RVS GS+ Y L AA AA AV DG
Sbjct 448 ASLTAALLVPLNILYTPTGPTLAELAALGVRRVSLGSLLYRRALAAAVTAATAVRDGRPT 507
Query 236 PRSVP-YAELQA 246
+ P YAE+QA
Sbjct 508 DLTAPSYAEVQA 519
>gi|345003080|ref|YP_004805934.1| hypothetical protein SACTE_5603 [Streptomyces sp. SirexAA-E]
gi|344318706|gb|AEN13394.1| conserved hypothetical protein [Streptomyces sp. SirexAA-E]
Length=301
Score = 154 bits (389), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 116/251 (47%), Positives = 146/251 (59%), Gaps = 10/251 (3%)
Query 3 FHDLHHQG-VPFVLPNAWDVPSALAYLAEGFTAIGTTSFGVSSSGGHPDGHRATRGANIA 61
F LH + P +LPNAWD SA A +GF AIGTTS GV+++ G PDG ATR +A
Sbjct 40 FALLHERDRAPLLLPNAWDHASAAALAGQGFPAIGTTSLGVAAAAGLPDGAAATRDVTLA 99
Query 62 LAAALAPLQCYVSVDIEDGYSDEPDAIADYVAQL---STAGINIEDSSAEKLIDPA-LAA 117
LA L SVD E G+SD+ +A+A +L AGIN+ED + + P L A
Sbjct 100 LARRLGQDSFLFSVDAEGGFSDDVEAVAALARELYEAGAAGINLEDGRPDGTLAPVELHA 159
Query 118 AKIVAIKQRNPEVFVNARVDTYWLRQHADTTSTIQRALRYVDAGADGVFVPLANDPDELA 177
AKI A+K P +FVNAR DT+WL Q T+T R Y AGADGVFVP +PD +A
Sbjct 160 AKIAAVKAATPGLFVNARTDTHWLGQEKGRTTT--RLAAYEQAGADGVFVPGLAEPDGIA 217
Query 178 ELTRNIPCPVNTLPVP-GLTIADLGELGVARVSTGSVPYSAGLYAAAHAARAVSDGEQL- 235
LT + P+N L P G T+ADL LGV RVS GS+ Y + L AA A +V DG +
Sbjct 218 ALTAALTVPLNILYTPAGPTVADLAGLGVRRVSLGSLLYRSALAAALATAASVRDGGRHA 277
Query 236 -PRSVPYAELQ 245
P + YA +Q
Sbjct 278 DPVTPSYAAVQ 288
>gi|319648780|ref|ZP_08002991.1| hypothetical protein HMPREF1012_04030 [Bacillus sp. BT1B_CT2]
gi|317389199|gb|EFV70015.1| hypothetical protein HMPREF1012_04030 [Bacillus sp. BT1B_CT2]
Length=280
Score = 153 bits (387), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 98/231 (43%), Positives = 126/231 (55%), Gaps = 15/231 (6%)
Query 2 SFHDLHHQGVPFVLPNAWDVPSALAYLAEGFTAIGTTSFGVSSSGGHPDG-HRATRGANI 60
+F DLHHQ PFVLPNAWD SA A+ GF A+GTTS G++ S G+PDG H
Sbjct 9 TFLDLHHQSDPFVLPNAWDAASAKAFQNCGFKAVGTTSAGIAMSLGYPDGEHLPFETLLS 68
Query 61 ALAAALAPLQCYVSVDIEDGYSDEPDAIAD---YVAQLSTAGINIEDSSAE---KLIDPA 114
L + VS D+E GY P+ +A+ A GINIED + E L D
Sbjct 69 VLKTITDAVDIPVSADLEAGYGQTPETVAENAKKAAAAGVVGINIEDGTKEPCRPLCDET 128
Query 115 LAAAKIVAIKQRNPEVFVNARVDTYWLRQHADTT---STIQRALRYVDAGADGVFVPLAN 171
L KI A+K+ N V +NAR D YWL A + + ++RA RY AGAD +F+P A+
Sbjct 129 LMEEKITAVKKLNLPVLINARTDVYWLNADAPGSRLQAAVRRANRYSQAGADCIFIPGAD 188
Query 172 DPDELAELTRNIPCPVNTLP---VPGLTIADLGELGVARVSTGSVPYSAGL 219
D +A L + I P+N L P L I L ELG+ R+S GS P+ A L
Sbjct 189 DAGTIAGLRKGISGPINVLAGSHTPSLQI--LSELGIERISCGSAPFRAAL 237
>gi|291436460|ref|ZP_06575850.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC
14672]
gi|291339355|gb|EFE66311.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC
14672]
Length=253
Score = 151 bits (381), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 112/252 (45%), Positives = 137/252 (55%), Gaps = 15/252 (5%)
Query 2 SFHDLHHQGVPFVLPNAWDVPSALAYLAEGFTAIGTTSFGVSSSGGHPDGHRATRGANIA 61
+F LHH P +LPNAWD SALA A GF A+GTTS V+++ G PDG ATR +
Sbjct 3 AFAALHHADEPLLLPNAWDHASALALAARGFRAVGTTSLAVAAAAGLPDGAAATREQTLR 62
Query 62 LAAALAPLQCYVSVDIEDGYSDEPDAIADYVAQLSTA---GINIEDSSAEKLIDPA-LAA 117
LA L +SVD E G+SD+PD +A+ L A GIN+ED + P A
Sbjct 63 LALTLGAGPFLLSVDAEGGFSDDPDEVAELARDLHAAGAVGINLEDG-----LGPVDRHA 117
Query 118 AKIVAIKQRNPEVFVNARVDTYWLRQHADTTSTIQRALRYVDAGADGVFVPLANDPDELA 177
AKI A++ P +FVNAR DTYWL D T RA Y DAGA GVFVP DP E+A
Sbjct 118 AKIAAVRAAAPGLFVNARTDTYWL---GDGEGTAARAESYRDAGAHGVFVPGLTDPREIA 174
Query 178 ELTRNIP-CPVNTLPVP-GLTIADLGELGVARVSTGSVPYSAGLYAAAHAARAVSDGEQL 235
L + P+N L P G + L +LGV RVS GS+ Y L AA A + G
Sbjct 175 ALVDRLGDTPLNVLYSPTGPCVPRLADLGVRRVSLGSLLYRRALGAAVETAAGIRAGRVP 234
Query 236 PRSVP-YAELQA 246
P Y E+QA
Sbjct 235 QGPAPSYEEVQA 246
>gi|52078915|ref|YP_077706.1| hypothetical protein BL01855 [Bacillus licheniformis ATCC 14580]
gi|52784289|ref|YP_090118.1| hypothetical protein BLi00469 [Bacillus licheniformis ATCC 14580]
gi|52002126|gb|AAU22068.1| hypothetical protein BL01855 [Bacillus licheniformis ATCC 14580]
gi|52346791|gb|AAU39425.1| conserved hypothetical protein [Bacillus licheniformis ATCC 14580]
Length=280
Score = 150 bits (378), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 96/231 (42%), Positives = 126/231 (55%), Gaps = 15/231 (6%)
Query 2 SFHDLHHQGVPFVLPNAWDVPSALAYLAEGFTAIGTTSFGVSSSGGHPDG-HRATRGANI 60
+F DLHHQ PFVLPNAWD SA A+ GF A+GTTS G++ S G+PDG H
Sbjct 9 TFLDLHHQSDPFVLPNAWDAASAKAFQNCGFKAVGTTSAGIAMSLGYPDGEHLPFETLLS 68
Query 61 ALAAALAPLQCYVSVDIEDGYSDEPDAIAD---YVAQLSTAGINIEDSSAE---KLIDPA 114
L + VS D+E GY P+ +A+ A G+NIED + + L D
Sbjct 69 VLKTITDAVDIPVSADLEAGYGQTPETVAENAKKAAAAGVVGMNIEDGTKDPCRPLSDAT 128
Query 115 LAAAKIVAIKQRNPEVFVNARVDTYWLRQHADTT---STIQRALRYVDAGADGVFVPLAN 171
L KI A+K+ N V +NAR D YWL A + + ++RA RY AGAD +F+P A+
Sbjct 129 LMEEKITAVKKLNLPVLINARTDVYWLNADAPGSRLQAAVRRANRYSQAGADCIFIPGAD 188
Query 172 DPDELAELTRNIPCPVNTLP---VPGLTIADLGELGVARVSTGSVPYSAGL 219
D +A L + I P+N L P L I L ELG+ R+S GS P+ A L
Sbjct 189 DAGTIAGLRKGISGPINVLAGSHTPSLQI--LSELGIERISCGSAPFRAAL 237
>gi|29828645|ref|NP_823279.1| hypothetical protein SAV_2103 [Streptomyces avermitilis MA-4680]
gi|29605749|dbj|BAC69814.1| hypothetical protein [Streptomyces avermitilis MA-4680]
Length=261
Score = 149 bits (376), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 117/253 (47%), Positives = 145/253 (58%), Gaps = 16/253 (6%)
Query 2 SFHDLHHQGVPFVLPNAWDVPSALAYLAEGFTAIGTTSFGVSSSGGHPDGHRATRGANIA 61
SF LHH P +LPNAWD SA A A+GF A+GTTS GV+++ G PDG ATR +
Sbjct 9 SFSALHHADAPLLLPNAWDHASAAALAAQGFEAVGTTSLGVAAAAGLPDGTAATREETVR 68
Query 62 LAAALAPLQCYVSVDIEDGYSDEPDAI---ADYVAQLSTAGINIEDSSAEKLIDPALAAA 118
LA L +SVD EDG+ +PD + A +A GIN+ED L L AA
Sbjct 69 LARQLGGGTFLLSVDAEDGFGHDPDGVAELARELAAAGAVGINLEDG----LASAKLHAA 124
Query 119 KIVAIKQRNPEVFVNARVDTYWLRQ--HADTTSTIQRALRYVDAGADGVFVPLANDPDEL 176
KI A+K P++FVNAR DTYWL HA+ T +R Y AGADGVFVP +DP +
Sbjct 125 KIAAVKAAVPDLFVNARTDTYWLGDGGHAE---TCRRLDAYRQAGADGVFVPGLSDPTRI 181
Query 177 AELTRNIPCPVNTLPVP-GLTIADLGELGVARVSTGSVPYSAGLYAAAHAARAVSDGEQL 235
L + + P+N L P G T+A LG+LGV RVS GS+ Y L AA AA + G
Sbjct 182 TALVKTLDVPLNILYSPLGPTVAQLGDLGVRRVSLGSLLYRRALGAALDAAADIRAGRP- 240
Query 236 PRSV--PYAELQA 246
PR V Y E+QA
Sbjct 241 PRGVAPTYTEIQA 253
>gi|145594946|ref|YP_001159243.1| hypothetical protein Strop_2418 [Salinispora tropica CNB-440]
gi|145304283|gb|ABP54865.1| hypothetical protein Strop_2418 [Salinispora tropica CNB-440]
Length=242
Score = 146 bits (369), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 105/246 (43%), Positives = 140/246 (57%), Gaps = 11/246 (4%)
Query 3 FHDLHHQGVPFVLPNAWDVPSALAYLAEGFTAIGTTSFGVSSSGGHPDGHRATRGANIAL 62
F LH G P VLPN WDV SA + GF A+GTTS GV+++ G PDG A G + L
Sbjct 4 FAALHRTGDPLVLPNVWDVASARGLVEAGFPALGTTSLGVAAAAGLPDGTDAALGETLRL 63
Query 63 AAALAPLQCYVSVDIEDGYSDEPDAIADYVAQLSTAGINIEDSSAEKLIDPALAAAKIVA 122
+LA L +++VDIE G A VA AG+N+ED+ + AA I +
Sbjct 64 TRSLAALPVHLTVDIETGSV----DTAAAVADAGAAGVNMEDA----MCPAETHAALIRS 115
Query 123 IKQRNPEVFVNARVDTYWLRQHADTTSTIQRALRYVDAGADGVFVPLANDPDELAELTRN 182
+K+ P +FVNAR DTYW R D T++R Y DAGADGVF+P P ++A +
Sbjct 116 VKREVPHLFVNARTDTYWQRA-GDLAETLRRVRLYADAGADGVFIPGLAGPADIAAVVAA 174
Query 183 IPCPVNTLPVPGL-TIADLGELGVARVSTGSVPYSAGLYAAAHAARAVSDGEQLPRSVP- 240
+ PVN L +PG T+ L LGV R+STGS+ + A L A+ A AV DG + R +P
Sbjct 175 VEVPVNVLFLPGRHTVVTLAGLGVGRISTGSLLFRAALAASVETAVAVRDGHTVRRDLPS 234
Query 241 YAELQA 246
YA++ A
Sbjct 235 YAKINA 240
>gi|300771293|ref|ZP_07081169.1| conserved hypothetical protein [Sphingobacterium spiritivorum
ATCC 33861]
gi|300761963|gb|EFK58783.1| conserved hypothetical protein [Sphingobacterium spiritivorum
ATCC 33861]
Length=248
Score = 146 bits (368), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 89/244 (37%), Positives = 127/244 (53%), Gaps = 10/244 (4%)
Query 3 FHDLHHQGVPFVLPNAWDVPSALAYLAEGFTAIGTTSFGVSSSGGHPDGHRATRGANIAL 62
F LH Q P +L N WD SA GF ++G++S +++ G+ DG T +
Sbjct 6 FKQLHQQSTPLLLGNVWDAHSAQLAEKAGFASLGSSSHAIANLLGYEDGENITFEELFFI 65
Query 63 AAALAP-LQCYVSVDIEDGYSDEPDAIADYVAQLS---TAGINIEDSSAEK----LIDPA 114
+ ++ VSVD E GY+D+P+ +A YV QLS AGIN+ED E L
Sbjct 66 VQRIVKAVKIPVSVDFEAGYADDPETVARYVKQLSDIGVAGINLEDGQVENGKRSLGSAQ 125
Query 115 LAAAKIVAIKQRNPEVFVNARVDTYWLRQHADTTSTIQRALRYVDAGADGVFVPLANDPD 174
L A KI AIK ++++NAR DTY +Q +I+RAL Y +AGADG+FVP+
Sbjct 126 LLADKIKAIKSVT-DIYINARTDTYVTKQEDALKQSIERALIYQEAGADGIFVPVIETKT 184
Query 175 ELAELTRNIPCPVNTLPVPGL-TIADLGELGVARVSTGSVPYSAGLYAAAHAARAVSDGE 233
++ + T + P+N P L +LGELGV R+S G+ Y + A A A
Sbjct 185 DIQQFTTEVALPLNVFLTPNLPNFDELGELGVKRLSHGAKLYEWLMKQAEEALTAFKKQP 244
Query 234 QLPR 237
LP+
Sbjct 245 VLPK 248
>gi|227540507|ref|ZP_03970556.1| PEP phosphonomutase [Sphingobacterium spiritivorum ATCC 33300]
gi|227239589|gb|EEI89604.1| PEP phosphonomutase [Sphingobacterium spiritivorum ATCC 33300]
Length=248
Score = 140 bits (354), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 88/244 (37%), Positives = 125/244 (52%), Gaps = 10/244 (4%)
Query 3 FHDLHHQGVPFVLPNAWDVPSALAYLAEGFTAIGTTSFGVSSSGGHPDGHR-ATRGANIA 61
F LH Q P +L N WD SA GF A+G++S +++ G+ DG A
Sbjct 6 FKQLHQQSTPLLLGNVWDAHSAQLAEKAGFAALGSSSHAIANLLGYEDGENIAFEELFFI 65
Query 62 LAAALAPLQCYVSVDIEDGYSDEPDAIADYVAQLS---TAGINIEDSSAEK----LIDPA 114
+ + ++ VSVD E GY+D+P+ +A YV QLS AGIN+ED E L
Sbjct 66 VQRIVKSVKIPVSVDFEAGYADDPETVARYVKQLSDIGVAGINLEDGQVENGKRSLGSAQ 125
Query 115 LAAAKIVAIKQRNPEVFVNARVDTYWLRQHADTTSTIQRALRYVDAGADGVFVPLANDPD 174
L A KI AIK ++++NAR DTY +Q +I+RA Y +AGADG+FVP+
Sbjct 126 LLADKIKAIKSVT-DIYINARTDTYVTKQQDALKQSIERAHIYQEAGADGIFVPVIETKT 184
Query 175 ELAELTRNIPCPVNTLPVPGL-TIADLGELGVARVSTGSVPYSAGLYAAAHAARAVSDGE 233
++ + T + P+N P L +LGELGV R+S G+ Y + A A
Sbjct 185 DIQQFTTEVALPLNVFLTPNLPPFDELGELGVKRLSHGAKLYEWLMKQAEEVLTAFKKHP 244
Query 234 QLPR 237
LP+
Sbjct 245 VLPK 248
>gi|297561594|ref|YP_003680568.1| PEP phosphonomutase [Nocardiopsis dassonvillei subsp. dassonvillei
DSM 43111]
gi|296846042|gb|ADH68062.1| PEP phosphonomutase [Nocardiopsis dassonvillei subsp. dassonvillei
DSM 43111]
Length=295
Score = 140 bits (354), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 111/250 (45%), Positives = 144/250 (58%), Gaps = 8/250 (3%)
Query 3 FHDLHHQGVPFVLPNAWDVPSALAYLAEGFTAIGTTSFGVSSSGGHPDGHRATRGANIAL 62
F LH +G P +LPNAWD SA A A GF A+GTTS GV+++ G PD R + L
Sbjct 36 FRALHLRGAPLLLPNAWDHASAAALAAAGFRAVGTTSLGVAAAAGLPDARGLAREETLRL 95
Query 63 AAALAPLQCYVSVDIEDGYSDEPDAIADYVAQLS---TAGINIEDSSAE-KLIDPALAAA 118
A L+ L VSVD+E G+S P +A A+L AGIN+ED A+ L D A
Sbjct 96 ARGLSRLDVPVSVDVEGGFSASPARVAALAAELKRTGIAGINLEDGLADGGLADTGHQRA 155
Query 119 KIVAIKQRNPEVFVNARVDTYWLRQHADTTSTIQRALRYVDAGADGVFVPLANDPDELAE 178
I A+++ P +F+NAR DT WL HA+ T+ RA Y +AGADGVFVP D +E+A
Sbjct 156 VIRAVREAAPTLFLNARTDTRWLPGHAEQTA--DRAAAYEEAGADGVFVPGLRDEEEIAA 213
Query 179 LTRNIPCPVNTLPVP-GLTIADLGELGVARVSTGSVPYSAGLYAAAHAARAVSDGEQLPR 237
L + P+N L P G + L +LGV RVS GS+ + A L+ A AA AV+ G LP
Sbjct 214 LAAALRVPLNILHSPDGPPLRVLADLGVRRVSCGSLLFRAALHGALAAAEAVASGLPLPE 273
Query 238 SVP-YAELQA 246
VP Y +Q
Sbjct 274 GVPDYGAVQG 283
>gi|261407221|ref|YP_003243462.1| hypothetical protein GYMC10_3417 [Paenibacillus sp. Y412MC10]
gi|261283684|gb|ACX65655.1| conserved hypothetical protein [Paenibacillus sp. Y412MC10]
Length=276
Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 90/266 (34%), Positives = 137/266 (52%), Gaps = 22/266 (8%)
Query 2 SFHDLHHQGVPFVLPNAWDVPSALAYLAEGFTAIGTTSFGVSSSGGHPDGHRATRGANIA 61
+F LH F+LPNAWD SA + GF AIGTTS G++ S G+ D +
Sbjct 12 AFKKLHSNF--FILPNAWDAASAKTFEKCGFKAIGTTSAGIAVSHGYADRNMPFDRMLDT 69
Query 62 LAAALAPLQCYVSVDIEDGYSDEPDAIADYVAQLSTA---GINIEDSSAEK---LIDPAL 115
+ + + V+VD+EDGY PD +A+ V Q+ A GINIEDS ++ L D L
Sbjct 70 VRRIVQTVDIPVTVDMEDGYGQTPDEVAESVKQVIKAGATGINIEDSGMDRQAPLHDILL 129
Query 116 AAAKIVAIKQRNPEV----FVNARVDTYWLRQH---ADTTSTIQRALRYVDAGADGVFVP 168
KI I++ + F+NAR+D YW++ TI+RA Y +AGAD +FVP
Sbjct 130 QQNKIAVIRRLGNTMGFPLFINARIDAYWIKSMPSAGRLEETIKRAHAYQEAGADCIFVP 189
Query 169 LANDPDELAELTRNIPCPVNTLPVPGL-TIADLGELGVARVSTGSVPYSAGLYAAAHAAR 227
+ ++ L I CP+N L PG+ + +L LG+ R+STGS P+ A +
Sbjct 190 GIQEITDIQTLRHEISCPINVLAGPGMPSAKELEALGIQRISTGSGPFRAAISLLDRM-- 247
Query 228 AVSDGEQLPRSVPYAELQARLVDYEN 253
G ++ + + +R++ Y++
Sbjct 248 ----GHEILEEGTFEHMTSRVLSYDD 269
>gi|329930133|ref|ZP_08283752.1| hypothetical protein HMPREF9412_1330 [Paenibacillus sp. HGF5]
gi|328935392|gb|EGG31867.1| hypothetical protein HMPREF9412_1330 [Paenibacillus sp. HGF5]
Length=273
Score = 139 bits (350), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 90/266 (34%), Positives = 139/266 (53%), Gaps = 22/266 (8%)
Query 2 SFHDLHHQGVPFVLPNAWDVPSALAYLAEGFTAIGTTSFGVSSSGGHPDGHRATRGANIA 61
+F LH F+LPNAWD SA + GF AIGTTS G++ S G+ D +
Sbjct 12 AFKKLHSNF--FILPNAWDAASANTFEKCGFKAIGTTSAGIAVSHGYADRNMPFDRMLDT 69
Query 62 LAAALAPLQCYVSVDIEDGYSDEPDAIADYVAQL---STAGINIEDSSAEK---LIDPAL 115
+ + + V+VD+EDGY PD +A+ V Q+ AGINIEDS ++ L D L
Sbjct 70 VRRIVQTVDIPVTVDMEDGYGQTPDEVAESVKQVIKAGAAGINIEDSGMDRQAPLHDILL 129
Query 116 AAAKIVAIKQRNPEV----FVNARVDTYWLRQH---ADTTSTIQRALRYVDAGADGVFVP 168
K+ I+ + F+NAR+D YW++ TI+RA Y +AGAD +FVP
Sbjct 130 QQNKLAVIRALGNAMGYPLFINARIDAYWIKSMPPAGRLEETIKRAHAYQEAGADCIFVP 189
Query 169 LANDPDELAELTRNIPCPVNTLPVPGL-TIADLGELGVARVSTGSVPYSAGLYAAAHAAR 227
+ ++ L I CP+N L PG+ + +L LG+ R+STGS P+ A + + H
Sbjct 190 GIQEISDIQTLRHEISCPINVLAGPGMPSAKELEALGIQRISTGSGPFRAAI-SLLHRM- 247
Query 228 AVSDGEQLPRSVPYAELQARLVDYEN 253
G+++ + + +R++ Y++
Sbjct 248 ----GQEMLEKGTFEHMTSRVLSYDD 269
>gi|56965475|ref|YP_177207.1| hypothetical protein ABC3713 [Bacillus clausii KSM-K16]
gi|56911719|dbj|BAD66246.1| conserved hypothetical protein [Bacillus clausii KSM-K16]
Length=281
Score = 139 bits (350), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 89/230 (39%), Positives = 126/230 (55%), Gaps = 17/230 (7%)
Query 2 SFHDLHHQGVPFVLPNAWDVPSALAYLAEGFTAIGTTSFGVSSSGGHPDGHRATRGANIA 61
+F LH Q FVLPNAWD SA + A GF AIGTTS G+++S G+PDG + R +
Sbjct 18 TFRCLHEQSSTFVLPNAWDAMSAKMFEAGGFQAIGTTSAGIAASLGYPDGQQLPRAKLVE 77
Query 62 LAAALA-PLQCYVSVDIEDGYSDEPDAIADYVAQLSTA---GINIEDSS---AEKLIDPA 114
+ +A + VS DIE GY + V ++ A GINIED + ++ + +
Sbjct 78 VVRNIAHSVAVPVSADIEAGYGRSVAEVVQTVKEVVAARAVGINIEDGTGNPSKPVFSIS 137
Query 115 LAAAKIVAIKQRNPEVFVNARVDTYWLRQHADTTSTIQ----RALRYVDAGADGVFVPLA 170
KI AIK + +FVNAR D YWL+ D S Q RA+ Y +AGAD +F+P
Sbjct 138 EQTEKIAAIKASHTPLFVNARTDIYWLK-IGDPLSRFQEAEKRAIAYQEAGADCLFIPGL 196
Query 171 NDPDELAELTRNIPCPVNTL---PVPGLTIADLGELGVARVSTGSVPYSA 217
D +E+ ++ I P+N L +P LT +L +G+ R+S GS P+ A
Sbjct 197 TDREEIQKMRAAISIPINLLVDSEMPALT--ELSTIGIERLSCGSAPFRA 244
>gi|302867890|ref|YP_003836527.1| hypothetical protein Micau_3423 [Micromonospora aurantiaca ATCC
27029]
gi|302570749|gb|ADL46951.1| hypothetical protein Micau_3423 [Micromonospora aurantiaca ATCC
27029]
Length=264
Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 107/253 (43%), Positives = 142/253 (57%), Gaps = 10/253 (3%)
Query 2 SFHDLHHQGVPFVLPNAWDVPSALAYLAEGFTAIGTTSFGVSSSGGHPDGHRATRGANIA 61
+F +LH G P +LPNAWD SA A A G AIGTTS GV+++ G PD RATR +
Sbjct 7 AFRELHRPGDPLLLPNAWDHASAAALAARGHQAIGTTSLGVAAAAGRPDAVRATRTETLE 66
Query 62 LAAALAPLQCYVSVDIEDGYSDEPDAIADYVAQLS---TAGINIEDSSAEKLIDP-ALAA 117
LA L L ++VD+EDG+ D+P +A +V +L+ G+N+ED + + P A
Sbjct 67 LAYRLRNLPALLTVDVEDGFHDDPAEVARFVGELAALGVVGVNVEDGRPDGRLAPAEHVA 126
Query 118 AKIVAIKQRNPEVFVNARVDTYWLRQHADTTSTIQRALRYVDAGADGVFVPLANDPDEL- 176
A I A++ P++FVNAR D +WL + +RA + AGAD +FVP A PDEL
Sbjct 127 AVIAAVRAAVPQIFVNARTDAWWLGVPSPLDEARRRAALFRAAGADCLFVPGA--PDELV 184
Query 177 AELTRNIPCPVNTLPVP-GLTIADLGELGVARVSTGSVPYSAGLYAAAHAARAVSDGEQ- 234
L P+N L P G +A LG LGVARVSTGS+ + A L A A+ G
Sbjct 185 GVLAAEAGLPLNVLYRPGGPDLAALGRLGVARVSTGSLLFRAALGTALRLTDAIGAGRDA 244
Query 235 -LPRSVPYAELQA 246
LP Y E+QA
Sbjct 245 GLPAPPTYEEVQA 257
>gi|126651260|ref|ZP_01723470.1| hypothetical protein BB14905_01320 [Bacillus sp. B14905]
gi|126592098|gb|EAZ86164.1| hypothetical protein BB14905_01320 [Bacillus sp. B14905]
Length=255
Score = 135 bits (341), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 92/243 (38%), Positives = 128/243 (53%), Gaps = 14/243 (5%)
Query 2 SFHDLHHQGVPFVLPNAWDVPSALAYLAEGFTAIGTTSFGVSSSGGHPDGHRATRGANIA 61
F+DLH L NAWDV SAL GF AIGTTS+G+++S G+ DG ++A
Sbjct 6 KFNDLHESQELLFLGNAWDVLSALILEKAGFQAIGTTSWGIANSLGYADGELIDFQRHLA 65
Query 62 LAAALAP-LQCYVSVDIEDGYSDEPDAIADYV---AQLSTAGINIEDSSAEKLIDPALAA 117
+ A+ + VS DIE GY + +I D V A + AGINIEDS + +L
Sbjct 66 IIQAITEQVNIPVSADIEAGYGHDEQSIIDNVLRTADVGVAGINIEDSFKHQGGLRSLTE 125
Query 118 AKIVAIKQRN-------PEVFVNARVDTYWLRQHADTTSTIQRALRYVDAGADGVFVPLA 170
+ R+ F+NAR DTY+ + T+ RA+ YV++GA GVF+P
Sbjct 126 HCHLLTNMRSMLDNRGYQNFFINARTDTYFQVEQP-YQETMTRAMAYVESGASGVFIPGL 184
Query 171 NDPDELAELTRNIPCPVNTLPVPGLT-IADLGELGVARVSTGSVPYSAGL-YAAAHAARA 228
+ DE+ +T N+ P+N L +PGLT L ELGV R+S G+ + Y AH A+
Sbjct 185 TNVDEIRAITSNVDAPINLLSLPGLTNCQTLKELGVRRMSFGNALSDKIIAYLTAHTAQL 244
Query 229 VSD 231
V D
Sbjct 245 VKD 247
>gi|319652376|ref|ZP_08006492.1| hypothetical protein HMPREF1013_03105 [Bacillus sp. 2_A_57_CT2]
gi|317395838|gb|EFV76560.1| hypothetical protein HMPREF1013_03105 [Bacillus sp. 2_A_57_CT2]
Length=279
Score = 135 bits (341), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 88/234 (38%), Positives = 127/234 (55%), Gaps = 17/234 (7%)
Query 2 SFHDLHHQGVPFVLPNAWDVPSALAYLAEGFTAIGTTSFGVSSSGGHPDGHRATRGANIA 61
+FH LH Q FVLPNAWDV SA + GF AIGTTS G+++S G+ DG +
Sbjct 12 TFHRLHQQSSTFVLPNAWDVISAKMFEECGFKAIGTTSAGIAASLGYLDGQSIPLNKMVE 71
Query 62 LAAALAP-LQCYVSVDIEDGYSDEPDAIAD---YVAQLSTAGINIEDSSAE---KLIDPA 114
+A + VS DIE GY + + + VA GIN+ED + + + D +
Sbjct 72 TIENIAKSVNVPVSADIEAGYGQTVEEVLETVKAVAAAGAIGINLEDGTGDPNRPIFDIS 131
Query 115 LAAAKIVAIKQ----RNPEVFVNARVDTYWLRQHADTTSTIQ----RALRYVDAGADGVF 166
KI AIK+ RN +F+NAR D YWL D+++ +Q RA Y DAGAD +F
Sbjct 132 SQEEKIAAIKELSESRNMPLFINARTDLYWL-NIGDSSTRLQEAVSRAKAYQDAGADCIF 190
Query 167 VPLANDPDELAELTRNIPCPVNTLPVPGL-TIADLGELGVARVSTGSVPYSAGL 219
+P D + ++ + CP+N L P + ++ +L E+ + R+S GSVP+ A L
Sbjct 191 IPGLTDRKIIKKMREEVSCPINLLVDPEMPSLTELSEIRIERLSCGSVPFRATL 244
>gi|260775940|ref|ZP_05884836.1| probable carboxyvinyl-carboxyphosphonate phosphorylmutase [Vibrio
coralliilyticus ATCC BAA-450]
gi|260608356|gb|EEX34525.1| probable carboxyvinyl-carboxyphosphonate phosphorylmutase [Vibrio
coralliilyticus ATCC BAA-450]
Length=251
Score = 135 bits (340), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 84/236 (36%), Positives = 123/236 (53%), Gaps = 17/236 (7%)
Query 3 FHDLHHQGVPFVLPNAWDVPSALAYLAEGFTAIGTTSFGVSSSGGHPDGHRATRGANIAL 62
F LH P V+ N WDVPSA GF A+GT+S ++++ G DG + +
Sbjct 2 FKSLHQANNPLVICNVWDVPSAKLAEKSGFLALGTSSAAIANTLGKEDGENLHFEDVLFI 61
Query 63 AAALA---PLQCYVSVDIEDGYSDEPDAIADYVAQL---STAGINIEDSSAEK----LID 112
A+ PL ++VDIE GY D PD IA + +L G+NIEDS K L D
Sbjct 62 VNAIVGSTPLP--LTVDIESGYGDTPDVIAHNIIELVKIGVVGVNIEDSIVAKGKRTLRD 119
Query 113 PALAAAKIVAIKQR----NPEVFVNARVDTYWLRQHADTTSTIQRALRYVDAGADGVFVP 168
A + ++++ N EVF+N R D + L + +++R RY AGADG+F+P
Sbjct 120 SVWFANLLTGVRKQLRDANVEVFINVRTDAFLLNAREALSVSLERIHRYQQAGADGIFLP 179
Query 169 LANDPDELAELTRNIPCPVNTLPVPGL-TIADLGELGVARVSTGSVPYSAGLYAAA 223
PD++ + + P P+N + VP L T + L LGV R+S G+V + A L + A
Sbjct 180 CIRTPDDIEAVVASTPLPINVMCVPELPTFSQLKALGVKRISMGNVVHEAMLASLA 235
>gi|260903988|ref|ZP_05912310.1| hypothetical protein BlinB_01557 [Brevibacterium linens BL2]
Length=235
Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/206 (42%), Positives = 115/206 (56%), Gaps = 19/206 (9%)
Query 34 AIGTTSFGVSSSGGHPDGHRATRGA------NIALAAALAPLQCYVSVDIEDGYSDEPDA 87
A+GTTS GV++ G D R T A NI + A L C D EDGY D+P
Sbjct 9 AVGTTSLGVAAGIGAADEDRETLRAMADLLENIRRSLPDALLTC----DFEDGYGDDPAT 64
Query 88 IADYV--------AQLSTAGINIEDSSAEKLIDPALAAAKIVAIKQRNPEVFVNARVDTY 139
+ + + A L GINIEDS+ +L++P+ K+ AIK+ P++FVNAR+DTY
Sbjct 65 VVETLRGAFAGEGADLRIDGINIEDSARGRLVEPSALVGKVSAIKEGFPDLFVNARIDTY 124
Query 140 WLRQHADTTSTIQRALRYVDAGADGVFVPLANDPDELAELTRNIPCPVNTLPVPGLTIAD 199
W Q + T++R RYVDAGADG+FVP D + + P PVN L P +
Sbjct 125 WTGQDS-LGDTLERMRRYVDAGADGIFVPGDLDLAVVKPIVDASPLPVNVLASPRYSRGQ 183
Query 200 LGELGVARVSTGSVPYSAGLYAAAHA 225
E+GVAR+STGS+ Y A + AAA +
Sbjct 184 FAEVGVARISTGSLLYRAAISAAAQS 209
>gi|308070162|ref|YP_003871767.1| hypothetical protein PPE_03411 [Paenibacillus polymyxa E681]
gi|305859441|gb|ADM71229.1| Conserved hypothetical protein [Paenibacillus polymyxa E681]
Length=262
Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 86/222 (39%), Positives = 128/222 (58%), Gaps = 13/222 (5%)
Query 3 FHDLHHQGVPFVLPNAWDVPSALAYLAEGFTAIGTTSFGVSSSGGHPDGHRATRGANIAL 62
FH LH L NAWD+ SA+A GF AIGTTS+G++++ G DG ++++
Sbjct 7 FHALHISEELLFLGNAWDLLSAVALEKAGFKAIGTTSWGIANTLGFSDGELIDFDQHVSI 66
Query 63 AAALAP-LQCYVSVDIEDGYSDEPDAIADYV---AQLSTAGINIEDS--SAEKLIDPALA 116
+A +Q VS DIE GY ++ I ++V A++ AGINIEDS + + L + L
Sbjct 67 IRTIAEHVQIPVSADIEAGYGEDTATIVEHVLRVAEVGVAGINIEDSLKTQKGLREVGLH 126
Query 117 AAKIVAIK-----QRNPEVFVNARVDTYWLRQHADTTSTIQRALRYVDAGADGVFVPLAN 171
+ + I+ + + F+NAR DTY L+ A + TI+RA YVD+GA G+FVP
Sbjct 127 SNLLSKIRTALDTRGFKKFFINARTDTY-LQMDAPFSETIERAKAYVDSGASGIFVPGLR 185
Query 172 DPDELAELTRNIPCPVNTLPVPGLT-IADLGELGVARVSTGS 212
+E+ E+ +I P+N L +PGLT + L +LGV R S G+
Sbjct 186 SDEEIREVVFHIHAPLNILSLPGLTNVHQLQQLGVKRFSFGN 227
>gi|312885279|ref|ZP_07744954.1| hypothetical protein VIBC2010_16389 [Vibrio caribbenthicus ATCC
BAA-2122]
gi|309367044|gb|EFP94621.1| hypothetical protein VIBC2010_16389 [Vibrio caribbenthicus ATCC
BAA-2122]
Length=252
Score = 132 bits (333), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 83/247 (34%), Positives = 123/247 (50%), Gaps = 25/247 (10%)
Query 3 FHDLHHQGVPFVLPNAWDVPSALAYLAEGFTAIGTTSFGVSSSGGHPDGHRATRGANIAL 62
F D+H+ P +L N WD SA + GF AIGT+S ++++ G DG NI
Sbjct 2 FKDMHNMEEPLILCNVWDASSAKLAESIGFLAIGTSSAAIATNLGLEDGE------NICF 55
Query 63 AAALAPLQCYV-------SVDIEDGYSDEPDAIADYV---AQLSTAGINIEDSS----AE 108
L ++ V +VDIE GY + P+AI + + +L GINIEDS+ +
Sbjct 56 EELLMTVRTIVNSTHLPLTVDIEAGYGETPEAIVNNITKLVKLGVVGINIEDSNVVGKSR 115
Query 109 KLIDPALAAAKIVAIKQRNPE----VFVNARVDTYWLRQHADTTSTIQRALRYVDAGADG 164
KL D L + K+ +K+R E VF+N R D + L S+I R RY AGADG
Sbjct 116 KLQDEVLFSEKLKEVKRRLIESGIDVFINVRSDVFLLNIENPVLSSINRIKRYQRAGADG 175
Query 165 VFVPLANDPDELAELTRNIPCPVNTLPVPGL-TIADLGELGVARVSTGSVPYSAGLYAAA 223
+F+P D D++ + + PVN + +P L L LG+ R+S G+ + L A +
Sbjct 176 IFLPCLVDSDDIKAIVASTSLPVNVMCLPELPCFEKLKTLGIRRISMGNFAHKVMLTALS 235
Query 224 HAARAVS 230
+ V
Sbjct 236 STLKTVK 242
>gi|342805718|gb|EGU40967.1| hypothetical protein VISP3789_17533 [Vibrio splendidus ATCC 33789]
Length=251
Score = 132 bits (332), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 84/234 (36%), Positives = 118/234 (51%), Gaps = 21/234 (8%)
Query 3 FHDLHHQGVPFVLPNAWDVPSALAYLAEGFTAIGTTSFGVSSSGGHPDGHRATRGANIAL 62
F +H+ P V+ N WDV SAL GF AIGT+S ++ S G DG +++
Sbjct 2 FKTMHNASKPLVICNVWDVASALIAEQTGFLAIGTSSAAIARSRGLDDGENIEFEEILSV 61
Query 63 AAALA-----PLQCYVSVDIEDGYSDEPDAIADYVAQL---STAGINIEDS----SAEKL 110
A+A PL SVDIE GY D P AI D + +L GINIEDS +L
Sbjct 62 VKAIAQATDLPL----SVDIESGYGDTPQAIYDNITELVNVGVVGINIEDSVVVNRERRL 117
Query 111 IDPALAAAKIVAIK----QRNPEVFVNARVDTYWLRQHADTTSTIQRALRYVDAGADGVF 166
D + + + +K + N EVF+N R+DT+ + +I+R Y AGADGVF
Sbjct 118 CDWMMFSQTLRKVKSMLNKANLEVFINVRIDTFLMDVKEPLVESIKRIQAYQQAGADGVF 177
Query 167 VPLANDPDELAELTRNIPCPVNTLPVPGL-TIADLGELGVARVSTGSVPYSAGL 219
+P D++ + + P+N + VP L +L LGV R+S G+ Y A L
Sbjct 178 LPCIKGTDDIKAVVDSTLLPINVMCVPELPNFKELEALGVKRISMGNFLYEAML 231
>gi|323491274|ref|ZP_08096459.1| hypothetical protein VIBR0546_12612 [Vibrio brasiliensis LMG
20546]
gi|323314400|gb|EGA67479.1| hypothetical protein VIBR0546_12612 [Vibrio brasiliensis LMG
20546]
Length=252
Score = 132 bits (331), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 84/241 (35%), Positives = 129/241 (54%), Gaps = 15/241 (6%)
Query 3 FHDLHHQGVPFVLPNAWDVPSALAYLAEGFTAIGTTSFGVSSSGGHPDGHRATRGANIAL 62
F DLH P ++ N WDV SAL +GF+AIGT+S ++S G DG + +++
Sbjct 2 FKDLHRNEKPLIICNVWDVASALIAEQQGFSAIGTSSAAIASMLGQEDGEQIEFQQLLSI 61
Query 63 AAALAPLQCY-VSVDIEDGYSDEPDAIADYVAQLS---TAGINIEDS----SAEKLIDPA 114
++ ++VDIE GY D P IA+ + QL+ GINIEDS L D
Sbjct 62 VDSICKASSLPLTVDIESGYGDTPQIIANNIIQLAELGVVGINIEDSVVVDGQRALCDAE 121
Query 115 LAAAKIVAIK-QRNP---EVFVNARVDTYWLRQHADTTSTIQRALRYVDAGADGVFVPLA 170
+ ++ Q N EVF+N R DTY L ++I+RA Y ++GADG+F+P
Sbjct 122 SFGRTLQSVTTQLNNAGVEVFINVRSDTYLLNVDNTLKASIERANIYQNSGADGLFLPCI 181
Query 171 NDPDELAELTRNIPCPVNTLPVPGL-TIADLGELGVARVSTGSVPYSAGLYAAAHAARAV 229
P+++ ++ + PVN + VP L A L +LGV R+S G+ + A L A+ +++ +
Sbjct 182 QQPNDIKKVVNSTALPVNVMCVPDLPDFATLEKLGVKRISMGNYVHQAML--ASLSSKLI 239
Query 230 S 230
S
Sbjct 240 S 240
>gi|310643312|ref|YP_003948070.1| protein [Paenibacillus polymyxa SC2]
gi|309248262|gb|ADO57829.1| Putative uncharacterized protein [Paenibacillus polymyxa SC2]
Length=267
Score = 131 bits (330), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 85/227 (38%), Positives = 127/227 (56%), Gaps = 21/227 (9%)
Query 2 SFHDLHHQGVPFVLPNAWDVPSALAYLAEGFTAIGTTSFGVSSSGGHPDGHRATRGANIA 61
F+DLH L NAWD+ SALA GF AIGTTS+G++++ G DG +++
Sbjct 6 EFNDLHTSEEILFLGNAWDLLSALALEKAGFKAIGTTSWGIANTLGFSDGELIDFEQHVS 65
Query 62 LAAALAP-LQCYVSVDIEDGYSDEPDAIADYV---AQLSTAGINIEDSSAEK-------- 109
+ +A +Q VS DIE GY + I ++V A + AGINIEDS ++
Sbjct 66 IIRTIAEHVQIPVSADIEAGYGKDVATIVEHVLRTADVGVAGINIEDSLKQQKGLREVRA 125
Query 110 ---LIDPALAAAKIVAIKQRNPEVFVNARVDTYWLRQHADTTSTIQRALRYVDAGADGVF 166
L+ AA + K + F+NAR DT+ L+ A + TI+RA YV++GA+G+F
Sbjct 126 HSNLLSKIRAALDVHGFK----DFFINARTDTF-LQIEAPLSETIERAKAYVESGANGIF 180
Query 167 VPLANDPDELAELTRNIPCPVNTLPVPGLT-IADLGELGVARVSTGS 212
VP + +E+ ++ +I P+N L +PGLT + L +LGV R S G+
Sbjct 181 VPGLKNDEEIRKVVYHIHAPLNVLSLPGLTNVRQLQQLGVKRFSFGN 227
>gi|291455116|ref|ZP_06594506.1| conserved hypothetical protein [Streptomyces albus J1074]
gi|291358065|gb|EFE84967.1| conserved hypothetical protein [Streptomyces albus J1074]
Length=274
Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 102/261 (40%), Positives = 133/261 (51%), Gaps = 19/261 (7%)
Query 3 FHDLHHQGVPFVLPNAWDVPSALAYLAEGFTAIGTTSFGVSSSGGHPDGHRATRG-ANIA 61
F LH P L NAWD SA A G A+ TTS GV+ + G DG+ R A A
Sbjct 15 FRSLHTPSAPLALANAWDAASARVVEAAGAPAVATTSAGVAWALGSVDGNSLDRDRALAA 74
Query 62 LAAALAPLQCYVSVDIEDGYSDEPDAIADYVAQL---STAGINIEDSSAEKLIDPALAAA 118
LA A + V+ D+EDGY P + V + AGIN+ED + PA A
Sbjct 75 LAQVTAVVTVPVTADLEDGYGAGPAEVGATVTRALAAGAAGINLEDGTRS----PADFAT 130
Query 119 KIVAIK----QRNPEVFVNARVDTYWLRQHA---DTTSTIQRALRYVDAGADGVFVPLAN 171
++ A + + + F+NAR+DTY L A T T+ RA YV AGADG+FVP
Sbjct 131 RLTAARDAADKAGTDPFLNARIDTYLLGLGAPEHRLTETLTRAHHYVAAGADGIFVPGVT 190
Query 172 DPDELAELTRNIPCPVNTLPVPGL-TIADLGELGVARVSTGSVPYSAGLYAAAHAARAVS 230
DP ++ L IP P+N + PG ++A+LG LGVARVS GS A AAR +
Sbjct 191 DPATISALAAEIPVPLNVMAGPGAPSVAELGRLGVARVSLGSGVAQAAYGVVGRAARELL 250
Query 231 DG---EQLPRSVPYAELQARL 248
G + L +VPY E+Q L
Sbjct 251 AGGTYDALADAVPYPEMQGLL 271
>gi|319651028|ref|ZP_08005163.1| hypothetical protein HMPREF1013_01772 [Bacillus sp. 2_A_57_CT2]
gi|317397384|gb|EFV78087.1| hypothetical protein HMPREF1013_01772 [Bacillus sp. 2_A_57_CT2]
Length=256
Score = 129 bits (324), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 86/223 (39%), Positives = 125/223 (57%), Gaps = 13/223 (5%)
Query 2 SFHDLHHQGVPFVLPNAWDVPSALAYLAEGFTAIGTTSFGVSSSGGHPDGHRATRGANIA 61
F++LH L NAWD+ SAL GF AIGTTS+G++ S G+ DG ++A
Sbjct 6 KFNELHFSNELLFLGNAWDLLSALTLEKAGFKAIGTTSWGIADSLGYADGELIDFDRHLA 65
Query 62 LAAALAP-LQCYVSVDIEDGYSDEPDAIADYV---AQLSTAGINIEDSSAEKLIDPALA- 116
+ +A ++ VS DIE GY ++ I ++V A AGINIEDS ++ L+
Sbjct 66 IIKTIAENVKIPVSADIEAGYGEDIPTIIEHVLMTADAGVAGINIEDSFKKQKGLKELSW 125
Query 117 ----AAKIVAIKQRN--PEVFVNARVDTYWLRQHADTTSTIQRALRYVDAGADGVFVPLA 170
+I A + N + ++NAR DTY L++ TI+RA YV++GA GVFVP
Sbjct 126 HCSLLERIRAALENNGYKDFYINARTDTY-LQKQNPLPETIERAKAYVESGASGVFVPGL 184
Query 171 NDPDELAELTRNIPCPVNTLPVPGLTIAD-LGELGVARVSTGS 212
+ E+ +T+N+ P+N L +PGLT + L ELGV R S G+
Sbjct 185 IEEVEIKAITKNVSAPLNVLSLPGLTNCNKLEELGVRRFSFGN 227
>gi|24214116|ref|NP_711597.1| 2-methylisocitrate lyase [Leptospira interrogans serovar Lai
str. 56601]
gi|24195003|gb|AAN48615.1| 2-methylisocitrate lyase [Leptospira interrogans serovar Lai
str. 56601]
Length=281
Score = 128 bits (322), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 89/238 (38%), Positives = 123/238 (52%), Gaps = 15/238 (6%)
Query 3 FHDLHHQGVPFVLPNAWDVPSALAYLAEGFTAIGTTSFGVSSSGGHPDGHRATRGANIA- 61
F LH +G F++PNAWD SA + GF+AIGTTS G++ + G PD R +
Sbjct 12 FRSLHERGT-FIMPNAWDAGSARMLVGSGFSAIGTTSAGIAFAAGLPDHQILDRDVMLEY 70
Query 62 LAAALAPLQCYVSVDIEDGYSDEPDAIADYVAQ---LSTAGINIEDSSAEK---LIDPAL 115
+ +A + VS D+E GY EPD +A+ V + + G NIED S + L++ L
Sbjct 71 VRNIVASVDVPVSADLESGYGIEPDKVAETVRRAISIGVVGCNIEDLSGDNSSPLLNAEL 130
Query 116 AAAKI-VAIKQRNPEVF---VNARVDTYWLRQHADTTSTIQRALRYVDAGADGVFVPLAN 171
AA +I A ++ N F + AR DT+ TI+RA Y AGAD +F+P N
Sbjct 131 AAERIHFARQEANAAGFAFTLTARTDTFLTNHPNALDETIRRADMYRKAGADCLFIPGVN 190
Query 172 DPDELAELTRNIPCPVNTLPVPG---LTIADLGELGVARVSTGSVPYSAGLYAAAHAA 226
D + + L R+I CP+N + G T ADL LGV R+S G A Y AA
Sbjct 191 DLETIGNLVRSIDCPLNVVVGLGKNNFTAADLLSLGVRRISIGGSLARACFYLIHQAA 248
>gi|45658177|ref|YP_002263.1| hypothetical protein LIC12331 [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|45601419|gb|AAS70900.1| conserved hypothetical protein [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
Length=281
Score = 128 bits (322), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 89/238 (38%), Positives = 123/238 (52%), Gaps = 15/238 (6%)
Query 3 FHDLHHQGVPFVLPNAWDVPSALAYLAEGFTAIGTTSFGVSSSGGHPDGHRATRGANIA- 61
F LH +G F++PNAWD SA + GF+AIGTTS G++ + G PD R +
Sbjct 12 FRSLHERGT-FIMPNAWDAGSARMLVGSGFSAIGTTSAGIAFAAGLPDHQILDRDVMLEY 70
Query 62 LAAALAPLQCYVSVDIEDGYSDEPDAIADYVAQ---LSTAGINIEDSSAEK---LIDPAL 115
+ +A + VS D+E GY EPD +A+ V + + G NIED S + L++ L
Sbjct 71 VRNIVASVDIPVSADLESGYGIEPDKVAETVRRAISIGVVGCNIEDLSGDNSSPLLNAEL 130
Query 116 AAAKI-VAIKQRNPEVF---VNARVDTYWLRQHADTTSTIQRALRYVDAGADGVFVPLAN 171
AA +I A ++ N F + AR DT+ TI+RA Y AGAD +F+P N
Sbjct 131 AAERIHFARQEANAAGFAFTLTARTDTFLTNHPNALDETIRRADMYRKAGADCLFIPGVN 190
Query 172 DPDELAELTRNIPCPVNTLPVPG---LTIADLGELGVARVSTGSVPYSAGLYAAAHAA 226
D + + L R+I CP+N + G T ADL LGV R+S G A Y AA
Sbjct 191 DIETIGNLVRSIDCPLNVVVGLGKNNFTAADLLSLGVRRISIGGSLARACFYLIHQAA 248
>gi|343501836|ref|ZP_08739704.1| hypothetical protein VITU9109_24640 [Vibrio tubiashii ATCC 19109]
gi|342816671|gb|EGU51566.1| hypothetical protein VITU9109_24640 [Vibrio tubiashii ATCC 19109]
Length=252
Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 71/228 (32%), Positives = 121/228 (54%), Gaps = 13/228 (5%)
Query 3 FHDLHHQGVPFVLPNAWDVPSALAYLAEGFTAIGTTSFGVSSSGGHPDGHRATRGANIAL 62
F ++H P V+ N WDVPSA + GF+ IGT+S ++ + G DG +++
Sbjct 2 FKNMHEMEEPLVICNVWDVPSAKIAESVGFSVIGTSSAAIAKNLGKEDGENIRFEDLLSI 61
Query 63 AAALAP-LQCYVSVDIEDGYSDEPDAIADYVAQL---STAGINIEDS----SAEKLIDPA 114
A+ + ++VD+E GY + P+ IA + +L G+NIEDS L D A
Sbjct 62 VKAIVKSTELPLTVDLESGYGETPEVIAKNMIELVKIGVVGVNIEDSVVVDGERSLCDSA 121
Query 115 LAAAKIV----AIKQRNPEVFVNARVDTYWLRQHADTTSTIQRALRYVDAGADGVFVPLA 170
L + + I++ E+F+N R D + L ++++R +Y AGADG+F+P
Sbjct 122 LFSKTLEKVRECIREAGLEIFINVRSDAFLLHVKEPLATSLERINQYQQAGADGIFLPCI 181
Query 171 NDPDELAELTRNIPCPVNTLPVPGL-TIADLGELGVARVSTGSVPYSA 217
N D++ + + P+N + +PGL + ++L +LGV R+S G+ + A
Sbjct 182 NKKDDIKSVVDSTSLPINVMCLPGLPSFSELKKLGVKRISMGNFVHEA 229
>gi|148976052|ref|ZP_01812795.1| hypothetical protein VSWAT3_07101 [Vibrionales bacterium SWAT-3]
gi|145964447|gb|EDK29701.1| hypothetical protein VSWAT3_07101 [Vibrionales bacterium SWAT-3]
Length=251
Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/234 (36%), Positives = 116/234 (50%), Gaps = 21/234 (8%)
Query 3 FHDLHHQGVPFVLPNAWDVPSALAYLAEGFTAIGTTSFGVSSSGGHPDGHRATRGANIAL 62
F +H P V+ N WDV SAL GF AIGT+S ++ S G DG ++
Sbjct 2 FKTMHTASKPLVICNVWDVASALIAEQTGFLAIGTSSAAIARSHGLDDGENIEFEEILSA 61
Query 63 AAALA-----PLQCYVSVDIEDGYSDEPDAIADYVAQL---STAGINIEDS----SAEKL 110
A+A PL SVDIE GY D P AI + + +L GINIEDS +L
Sbjct 62 VKAIAQATDLPL----SVDIESGYGDTPQAIYENITELVNVGVVGINIEDSVVVNRERRL 117
Query 111 IDPALAAAKIVAIK----QRNPEVFVNARVDTYWLRQHADTTSTIQRALRYVDAGADGVF 166
D + + + +K + N EVF+N R+DT+ + +I++ Y AGADGVF
Sbjct 118 CDWMMFSQTLRKVKSMLNKANLEVFINVRIDTFLMNVKEPLEESIKKIQAYQQAGADGVF 177
Query 167 VPLANDPDELAELTRNIPCPVNTLPVPGL-TIADLGELGVARVSTGSVPYSAGL 219
+P D++ + + P+N + VP L +L LGV R+S G+ Y A L
Sbjct 178 LPCIKGTDDIKAVVDSTLLPINVMCVPELPNFKELEALGVKRISMGNFLYEAML 231
>gi|227327355|ref|ZP_03831379.1| hypothetical protein PcarcW_08543 [Pectobacterium carotovorum
subsp. carotovorum WPP14]
Length=252
Score = 125 bits (313), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 73/230 (32%), Positives = 123/230 (54%), Gaps = 13/230 (5%)
Query 1 MSFHDLHHQGVPFVLPNAWDVPSALAYLAEGFTAIGTTSFGVSSSGGHPDGHRATRGANI 60
M+F +LH+Q P ++ N WD SA+A G+ A+GT+S +++ G+ DG +
Sbjct 1 MNFTELHNQNKPLLIANVWDAGSAIAAQEAGYQALGTSSAAIAAMLGYEDGEAMSFDELF 60
Query 61 ALAAAL-APLQCYVSVDIEDGYSDEPDAIAD---YVAQLSTAGINIEDSSAEK---LIDP 113
+ + + +SVD+E G+ I D + QL G+N+EDS K +D
Sbjct 61 YVVTRIKSATHLPLSVDVEAGFGRTASEITDNLKRLVQLGVVGVNLEDSRVVKGVRQLDD 120
Query 114 ALAAAKIVA-----IKQRNPEVFVNARVDTYWLRQHADTTSTIQRALRYVDAGADGVFVP 168
A+A A ++ ++ ++ ++F+N R DT+ L H T+ R Y ++GADG+FVP
Sbjct 121 AMAFASMLKEIRNTLEMKSDQLFLNIRTDTFLLGHHQALQETLLRGRLYQESGADGLFVP 180
Query 169 LANDPDELAELTRNIPCPVNTLPVPGL-TIADLGELGVARVSTGSVPYSA 217
++ L+R I P+N + +P L + LG+LGV R+S G+ +SA
Sbjct 181 CLTSEHDIETLSREINLPLNVMCMPELPSFNRLGKLGVRRISMGNFVHSA 230
>gi|170756847|ref|YP_001780522.1| hypothetical protein CLD_3671 [Clostridium botulinum B1 str.
Okra]
gi|169122059|gb|ACA45895.1| conserved hypothetical protein [Clostridium botulinum B1 str.
Okra]
Length=299
Score = 125 bits (313), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 81/251 (33%), Positives = 131/251 (53%), Gaps = 15/251 (5%)
Query 2 SFHDLHHQGVPFVLPNAWDVPSALAYLAEGFTAIGTTSFGVSSSGGHPDGHRATRGANIA 61
F ++HH+ F+LPNAWD+ SA+ Y F A+GTTS G++ S G+ DG + +
Sbjct 32 QFQEIHHRNKMFILPNAWDIGSAVIYEKFNFPAVGTTSAGLAYSLGYSDGEKIDFEHIVQ 91
Query 62 LAAALAP-LQCYVSVDIEDGYSDEPDAIADYVAQLSTA---GINIEDSSAE---KLIDPA 114
+ + + VSVDIE GY+D D I + V ++ A GINIED ++ L +
Sbjct 92 IVNQITQRISIPVSVDIELGYADTIDGIVENVTKIIEAGAVGINIEDGCSKPTPYLENLD 151
Query 115 LAAAKIVAIKQRNPEV---FV-NARVDTYWL---RQHADTTSTIQRALRYVDAGADGVFV 167
+ KI AI + ++ FV NAR +++ ++ + I+RA + +GAD +F+
Sbjct 152 IQIKKIQAISKLKEKLGIPFVLNARTCVFFIKAGKEEERLSIAIERANAFHKSGADCIFI 211
Query 168 PLANDPDELAELTRNIPCPVNTLPVPGL-TIADLGELGVARVSTGSVPYSAGLYAAAHAA 226
P A + +++L NIP P+N L P + +L LGV R+S GS P A
Sbjct 212 PGAIEECNISKLIENIPAPINILATPMTNNLENLERLGVRRLSLGSAPVRAAYSNLIETV 271
Query 227 RAVSDGEQLPR 237
+ + D ++ +
Sbjct 272 KQIQDENKISK 282
Lambda K H
0.316 0.132 0.385
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 384134341080
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40