BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv2003c
Length=285
Score E
Sequences producing significant alignments: (Bits) Value
gi|15609140|ref|NP_216519.1| hypothetical protein Rv2003c [Mycob... 568 3e-160
gi|289443494|ref|ZP_06433238.1| conserved hypothetical protein [... 566 2e-159
gi|167970469|ref|ZP_02552746.1| hypothetical protein MtubH3_2153... 464 6e-129
gi|254232174|ref|ZP_04925501.1| conserved hypothetical protein [... 454 1e-125
gi|163782665|ref|ZP_02177662.1| hypothetical protein HG1285_1731... 158 1e-36
gi|254167843|ref|ZP_04874692.1| Methyltransferase domain family ... 152 4e-35
gi|320100275|ref|YP_004175867.1| type 11 methyltransferase [Desu... 152 6e-35
gi|254167886|ref|ZP_04874735.1| Methyltransferase domain family ... 148 1e-33
gi|337287534|ref|YP_004627007.1| type 11 methyltransferase [Ther... 135 9e-30
gi|345301948|ref|YP_004823850.1| type 11 methyltransferase [Rhod... 133 3e-29
gi|268315637|ref|YP_003289356.1| type 11 methyltransferase [Rhod... 129 4e-28
gi|288817945|ref|YP_003432292.1| SAM-dependent methyltransferase... 128 9e-28
gi|119357914|ref|YP_912558.1| methyltransferase type 11 [Chlorob... 128 1e-27
gi|206890019|ref|YP_002249648.1| SAM-dependent methyltransferase... 124 1e-26
gi|332159397|ref|YP_004424676.1| hypothetical protein PNA2_1757 ... 123 3e-26
gi|118580353|ref|YP_901603.1| type 11 methyltransferase [Pelobac... 122 5e-26
gi|14601700|ref|NP_148241.1| hypothetical protein APE_1889 [Aero... 122 7e-26
gi|242398685|ref|YP_002994109.1| SAM-dependent methyltransferase... 121 1e-25
gi|333909922|ref|YP_004483655.1| type 11 methyltransferase [Meth... 121 1e-25
gi|253702658|ref|YP_003023847.1| methyltransferase type 11 [Geob... 121 1e-25
gi|336121436|ref|YP_004576211.1| type 11 methyltransferase [Meth... 121 1e-25
gi|292490570|ref|YP_003526009.1| methyltransferase type 11 [Nitr... 120 2e-25
gi|117928987|ref|YP_873538.1| type 11 methyltransferase [Acidoth... 120 2e-25
gi|148265482|ref|YP_001232188.1| PAS/PAC sensor-containing digua... 119 5e-25
gi|150401268|ref|YP_001325034.1| methyltransferase type 11 [Meth... 118 8e-25
gi|18977547|ref|NP_578904.1| hypothetical protein PF1175 [Pyroco... 117 2e-24
gi|219850133|ref|YP_002464566.1| type 11 methyltransferase [Chlo... 117 2e-24
gi|322419700|ref|YP_004198923.1| type 11 methyltransferase [Geob... 116 3e-24
gi|15606491|ref|NP_213871.1| hypothetical protein aq_1270 [Aquif... 116 5e-24
gi|206895125|ref|YP_002246375.1| SAM-dependent methyltransferase... 115 6e-24
gi|330506896|ref|YP_004383324.1| methyltransferase [Methanosaeta... 115 9e-24
gi|14590962|ref|NP_143037.1| hypothetical protein PH1134 [Pyroco... 114 2e-23
gi|327399550|ref|YP_004340419.1| type 11 methyltransferase [Hipp... 113 4e-23
gi|167037059|ref|YP_001664637.1| type 11 methyltransferase [Ther... 112 9e-23
gi|188997107|ref|YP_001931358.1| type 11 methyltransferase [Sulf... 111 1e-22
gi|326391285|ref|ZP_08212826.1| Methyltransferase type 11 [Therm... 110 2e-22
gi|268324767|emb|CBH38355.1| conserved hypothetical protein, met... 110 2e-22
gi|237808580|ref|YP_002893020.1| Methyltransferase type 11 [Tolu... 110 3e-22
gi|88601569|ref|YP_501747.1| methlytransferase [Methanospirillum... 109 4e-22
gi|345018168|ref|YP_004820521.1| type 11 methyltransferase [Ther... 109 5e-22
gi|297526089|ref|YP_003668113.1| type 11 methyltransferase [Stap... 109 6e-22
gi|126465628|ref|YP_001040737.1| methyltransferase type 11 [Stap... 109 6e-22
gi|225850884|ref|YP_002731118.1| SAM-dependent methyltransferase... 108 7e-22
gi|337288958|ref|YP_004628430.1| type 11 methyltransferase [Ther... 108 1e-21
gi|57640639|ref|YP_183117.1| SAM-dependent methyltransferase [Th... 108 1e-21
gi|18313601|ref|NP_560268.1| hypothetical protein PAE2806 [Pyrob... 107 1e-21
gi|20808303|ref|NP_623474.1| SAM-dependent methyltransferase [Th... 107 2e-21
gi|217966942|ref|YP_002352448.1| type 11 methyltransferase [Dict... 107 2e-21
gi|256810264|ref|YP_003127633.1| Methyltransferase type 11 [Meth... 106 5e-21
gi|343460216|gb|AEM38652.1| Methyltransferase type 11 [Pyrolobus... 106 5e-21
>gi|15609140|ref|NP_216519.1| hypothetical protein Rv2003c [Mycobacterium tuberculosis H37Rv]
gi|15841485|ref|NP_336522.1| hypothetical protein MT2059 [Mycobacterium tuberculosis CDC1551]
gi|31793183|ref|NP_855676.1| hypothetical protein Mb2026c [Mycobacterium bovis AF2122/97]
38 more sequence titles
Length=285
Score = 568 bits (1464), Expect = 3e-160, Method: Compositional matrix adjust.
Identities = 284/285 (99%), Positives = 285/285 (100%), Gaps = 0/285 (0%)
Query 1 VVKRSRATRLSPSIWSGWESPQCRSIRARLLLPRGRSRPPNADCCWNQLAVTPDTRMPAS 60
+VKRSRATRLSPSIWSGWESPQCRSIRARLLLPRGRSRPPNADCCWNQLAVTPDTRMPAS
Sbjct 1 MVKRSRATRLSPSIWSGWESPQCRSIRARLLLPRGRSRPPNADCCWNQLAVTPDTRMPAS 60
Query 61 SAAGRDAAAYDAWYDSPTGRPILATEVAALRPLIEVFAQPRLEIGVGTGRFADLLGVRFG 120
SAAGRDAAAYDAWYDSPTGRPILATEVAALRPLIEVFAQPRLEIGVGTGRFADLLGVRFG
Sbjct 61 SAAGRDAAAYDAWYDSPTGRPILATEVAALRPLIEVFAQPRLEIGVGTGRFADLLGVRFG 120
Query 121 LDPSRDALMFARRRGVLVANAVGEAVPFVSRHFGAVLMAFTLCFVTDPAAIFRETRRLLA 180
LDPSRDALMFARRRGVLVANAVGEAVPFVSRHFGAVLMAFTLCFVTDPAAIFRETRRLLA
Sbjct 121 LDPSRDALMFARRRGVLVANAVGEAVPFVSRHFGAVLMAFTLCFVTDPAAIFRETRRLLA 180
Query 181 DGGGLVIGFLPRGTPWADLYALRAARGQPGYRDARFYTAAELEQLLADSGFRVIARRCTL 240
DGGGLVIGFLPRGTPWADLYALRAARGQPGYRDARFYTAAELEQLLADSGFRVIARRCTL
Sbjct 181 DGGGLVIGFLPRGTPWADLYALRAARGQPGYRDARFYTAAELEQLLADSGFRVIARRCTL 240
Query 241 HQPPGLARYDIEAAHDGIQAGAGFVAISAVDQAHEPKDDHPLESE 285
HQPPGLARYDIEAAHDGIQAGAGFVAISAVDQAHEPKDDHPLESE
Sbjct 241 HQPPGLARYDIEAAHDGIQAGAGFVAISAVDQAHEPKDDHPLESE 285
>gi|289443494|ref|ZP_06433238.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
gi|289570103|ref|ZP_06450330.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
gi|289750585|ref|ZP_06509963.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
gi|289754109|ref|ZP_06513487.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
gi|289416413|gb|EFD13653.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
gi|289543857|gb|EFD47505.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
gi|289691172|gb|EFD58601.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
gi|289694696|gb|EFD62125.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
Length=285
Score = 566 bits (1458), Expect = 2e-159, Method: Compositional matrix adjust.
Identities = 283/285 (99%), Positives = 284/285 (99%), Gaps = 0/285 (0%)
Query 1 VVKRSRATRLSPSIWSGWESPQCRSIRARLLLPRGRSRPPNADCCWNQLAVTPDTRMPAS 60
+VKRSRATRLSPSIWSGWESPQCRSIRARLLLPRGRSRPPNADCCWNQLAVTPDTRMPAS
Sbjct 1 MVKRSRATRLSPSIWSGWESPQCRSIRARLLLPRGRSRPPNADCCWNQLAVTPDTRMPAS 60
Query 61 SAAGRDAAAYDAWYDSPTGRPILATEVAALRPLIEVFAQPRLEIGVGTGRFADLLGVRFG 120
SAAGRDAAAYDAWYDSPTGRPILATEVAALRPLIEVFAQPRLEIGVGTGRFADLLGVRFG
Sbjct 61 SAAGRDAAAYDAWYDSPTGRPILATEVAALRPLIEVFAQPRLEIGVGTGRFADLLGVRFG 120
Query 121 LDPSRDALMFARRRGVLVANAVGEAVPFVSRHFGAVLMAFTLCFVTDPAAIFRETRRLLA 180
LDPSRDAL FARRRGVLVANAVGEAVPFVSRHFGAVLMAFTLCFVTDPAAIFRETRRLLA
Sbjct 121 LDPSRDALTFARRRGVLVANAVGEAVPFVSRHFGAVLMAFTLCFVTDPAAIFRETRRLLA 180
Query 181 DGGGLVIGFLPRGTPWADLYALRAARGQPGYRDARFYTAAELEQLLADSGFRVIARRCTL 240
DGGGLVIGFLPRGTPWADLYALRAARGQPGYRDARFYTAAELEQLLADSGFRVIARRCTL
Sbjct 181 DGGGLVIGFLPRGTPWADLYALRAARGQPGYRDARFYTAAELEQLLADSGFRVIARRCTL 240
Query 241 HQPPGLARYDIEAAHDGIQAGAGFVAISAVDQAHEPKDDHPLESE 285
HQPPGLARYDIEAAHDGIQAGAGFVAISAVDQAHEPKDDHPLESE
Sbjct 241 HQPPGLARYDIEAAHDGIQAGAGFVAISAVDQAHEPKDDHPLESE 285
>gi|167970469|ref|ZP_02552746.1| hypothetical protein MtubH3_21533 [Mycobacterium tuberculosis
H37Ra]
gi|339294929|gb|AEJ47040.1| hypothetical protein CCDC5079_1850 [Mycobacterium tuberculosis
CCDC5079]
gi|339298552|gb|AEJ50662.1| hypothetical protein CCDC5180_1825 [Mycobacterium tuberculosis
CCDC5180]
Length=235
Score = 464 bits (1194), Expect = 6e-129, Method: Compositional matrix adjust.
Identities = 234/235 (99%), Positives = 235/235 (100%), Gaps = 0/235 (0%)
Query 51 VTPDTRMPASSAAGRDAAAYDAWYDSPTGRPILATEVAALRPLIEVFAQPRLEIGVGTGR 110
+TPDTRMPASSAAGRDAAAYDAWYDSPTGRPILATEVAALRPLIEVFAQPRLEIGVGTGR
Sbjct 1 MTPDTRMPASSAAGRDAAAYDAWYDSPTGRPILATEVAALRPLIEVFAQPRLEIGVGTGR 60
Query 111 FADLLGVRFGLDPSRDALMFARRRGVLVANAVGEAVPFVSRHFGAVLMAFTLCFVTDPAA 170
FADLLGVRFGLDPSRDALMFARRRGVLVANAVGEAVPFVSRHFGAVLMAFTLCFVTDPAA
Sbjct 61 FADLLGVRFGLDPSRDALMFARRRGVLVANAVGEAVPFVSRHFGAVLMAFTLCFVTDPAA 120
Query 171 IFRETRRLLADGGGLVIGFLPRGTPWADLYALRAARGQPGYRDARFYTAAELEQLLADSG 230
IFRETRRLLADGGGLVIGFLPRGTPWADLYALRAARGQPGYRDARFYTAAELEQLLADSG
Sbjct 121 IFRETRRLLADGGGLVIGFLPRGTPWADLYALRAARGQPGYRDARFYTAAELEQLLADSG 180
Query 231 FRVIARRCTLHQPPGLARYDIEAAHDGIQAGAGFVAISAVDQAHEPKDDHPLESE 285
FRVIARRCTLHQPPGLARYDIEAAHDGIQAGAGFVAISAVDQAHEPKDDHPLESE
Sbjct 181 FRVIARRCTLHQPPGLARYDIEAAHDGIQAGAGFVAISAVDQAHEPKDDHPLESE 235
>gi|254232174|ref|ZP_04925501.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
gi|254551025|ref|ZP_05141472.1| hypothetical protein Mtube_11271 [Mycobacterium tuberculosis
'98-R604 INH-RIF-EM']
gi|294996937|ref|ZP_06802628.1| hypothetical protein Mtub2_21133 [Mycobacterium tuberculosis
210]
28 more sequence titles
Length=229
Score = 454 bits (1167), Expect = 1e-125, Method: Compositional matrix adjust.
Identities = 229/229 (100%), Positives = 229/229 (100%), Gaps = 0/229 (0%)
Query 57 MPASSAAGRDAAAYDAWYDSPTGRPILATEVAALRPLIEVFAQPRLEIGVGTGRFADLLG 116
MPASSAAGRDAAAYDAWYDSPTGRPILATEVAALRPLIEVFAQPRLEIGVGTGRFADLLG
Sbjct 1 MPASSAAGRDAAAYDAWYDSPTGRPILATEVAALRPLIEVFAQPRLEIGVGTGRFADLLG 60
Query 117 VRFGLDPSRDALMFARRRGVLVANAVGEAVPFVSRHFGAVLMAFTLCFVTDPAAIFRETR 176
VRFGLDPSRDALMFARRRGVLVANAVGEAVPFVSRHFGAVLMAFTLCFVTDPAAIFRETR
Sbjct 61 VRFGLDPSRDALMFARRRGVLVANAVGEAVPFVSRHFGAVLMAFTLCFVTDPAAIFRETR 120
Query 177 RLLADGGGLVIGFLPRGTPWADLYALRAARGQPGYRDARFYTAAELEQLLADSGFRVIAR 236
RLLADGGGLVIGFLPRGTPWADLYALRAARGQPGYRDARFYTAAELEQLLADSGFRVIAR
Sbjct 121 RLLADGGGLVIGFLPRGTPWADLYALRAARGQPGYRDARFYTAAELEQLLADSGFRVIAR 180
Query 237 RCTLHQPPGLARYDIEAAHDGIQAGAGFVAISAVDQAHEPKDDHPLESE 285
RCTLHQPPGLARYDIEAAHDGIQAGAGFVAISAVDQAHEPKDDHPLESE
Sbjct 181 RCTLHQPPGLARYDIEAAHDGIQAGAGFVAISAVDQAHEPKDDHPLESE 229
>gi|163782665|ref|ZP_02177662.1| hypothetical protein HG1285_17315 [Hydrogenivirga sp. 128-5-R1-1]
gi|159882238|gb|EDP75745.1| hypothetical protein HG1285_17315 [Hydrogenivirga sp. 128-5-R1-1]
Length=215
Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 86/207 (42%), Positives = 116/207 (57%), Gaps = 8/207 (3%)
Query 67 AAAYDAWYDSPTGRPILATEVAALRPLIEVFAQPRLEIGVGTGRFADLLGVRFGLDPSRD 126
A YD WY+ P GR EV L+ L LE+GVGTGRFA+ LGV FGLDPS +
Sbjct 8 ALKYDLWYEKPFGRSAFELEVKCLKELAGELGSA-LEVGVGTGRFAEALGVEFGLDPSYE 66
Query 127 ALMFARRRGVLVANAVGEAVPFVSRHFGAVLMAFTLCFVTDPAAIFRETRRLLADGGGLV 186
L AR RG+ GE++PF + F VL+ ++CFV +PA + E RR+L GG L+
Sbjct 67 MLKLARDRGIKCVQGAGESLPFRNEVFDLVLIVVSICFVDNPAEVLEECRRVLKRGGTLL 126
Query 187 IGFLPRGTPWADLYALRAARGQPGYRDARFYTAAELEQLLADSGFRVIARRCTLHQPPG- 245
+G + R + WAD Y +A G P YR A FY+ ++E LL GFR+ TL + P
Sbjct 127 LGLIVRESRWADFYIKKAREGHPIYRHATFYSLRDIEVLLESKGFRIERMLSTLLEEPQD 186
Query 246 ---LARYDIEAAHDGIQAGAGFVAISA 269
+++ DI +G + AGF I A
Sbjct 187 EEPVSKRDI---LEGFEPLAGFTCIKA 210
>gi|254167843|ref|ZP_04874692.1| Methyltransferase domain family [Aciduliprofundum boonei T469]
gi|197623134|gb|EDY35700.1| Methyltransferase domain family [Aciduliprofundum boonei T469]
Length=204
Score = 152 bits (385), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 77/204 (38%), Positives = 118/204 (58%), Gaps = 10/204 (4%)
Query 68 AAYDAWYDSPTGRPILATEVAALRPLIEVFAQPRLEIGVGTGRFADLLGVRFGLDPSRDA 127
A YD+WYD + I E+ AL+P++ + P+LEIGVGTGRFA LG+ +G+DP ++
Sbjct 5 AEYDSWYDRH--KEIFDAEIKALKPIVGKYPSPKLEIGVGTGRFAYALGIEYGIDPDKNM 62
Query 128 LMFARRRGVLVANAVGEAVPFVSRHFGAVLMAFTLCFVTDPAAIFRETRRLLADGGGLVI 187
L FA+ RG+ V GE +P+ S+ F VL++ +L F +D + E+ R+L D GG+ I
Sbjct 63 LEFAKNRGIKVKEGYGENLPYKSKRFYLVLISTSLPFFSDARKVIEESYRVLKDEGGIAI 122
Query 188 GFLPRGTPWADLYALRAARGQPGYRDARFYTAAELEQLLADSGFRVIARRCTLHQPPGLA 247
GF+PR + + + Y +G +++ARFYT E+E LL D F V R L +
Sbjct 123 GFIPRNSYFGEKYKKMGEKGDERFKNARFYTIEEVESLLEDLFFIVRIRSTLLGK----- 177
Query 248 RYDIEA-AHDGIQAGAGFVAISAV 270
D+E +G + A FV + +
Sbjct 178 --DVEEDVVNGYREDASFVVLEGI 199
>gi|320100275|ref|YP_004175867.1| type 11 methyltransferase [Desulfurococcus mucosus DSM 2162]
gi|319752627|gb|ADV64385.1| Methyltransferase type 11 [Desulfurococcus mucosus DSM 2162]
Length=214
Score = 152 bits (384), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 81/200 (41%), Positives = 117/200 (59%), Gaps = 3/200 (1%)
Query 70 YDAWYDSPTGRPILATEVAALRPLIEVFAQPRLEIGVGTGRFADLLGVRFGLDPSRDALM 129
YD WY+S R I +E+ A+ +P LEIGVG+GRF+ L + G+DPS +
Sbjct 12 YDEWYES--NRLIYESELRAVEKASTRVPRPWLEIGVGSGRFSSPLRIDVGIDPSERIIS 69
Query 130 FARRRGVLVANAVGEAVPFVSRHFGAVLMAFTLCFVTDPAAIFRETRRLLADGGGLVIGF 189
A RGV VGE +PF FG V + TLCFV +P + +E+ R+L D G +++GF
Sbjct 70 LAYERGVESVVGVGEELPFRDSCFGGVFIIVTLCFVDNPLRVLKESWRVLRDDGYVIVGF 129
Query 190 LPRGTPWADLYALRAARGQPGYRDARFYTAAELEQLLADSGFRVIARRCTLHQPPGLARY 249
+PR +PW LY + A+G YR ARFY+ +E+ ++L SGF+ ++ TL Q PG R+
Sbjct 130 VPRESPWGRLYVEKKAKGHRFYRLARFYSVSEVYEMLEASGFKTVSVVSTLLQGPGDVRF 189
Query 250 DIEAAHDGIQAGAGFVAISA 269
E +G GAGF+ + A
Sbjct 190 -AETPVEGYVEGAGFIVVKA 208
>gi|254167886|ref|ZP_04874735.1| Methyltransferase domain family [Aciduliprofundum boonei T469]
gi|289596629|ref|YP_003483325.1| Methyltransferase type 11 [Aciduliprofundum boonei T469]
gi|197623177|gb|EDY35743.1| Methyltransferase domain family [Aciduliprofundum boonei T469]
gi|289534416|gb|ADD08763.1| Methyltransferase type 11 [Aciduliprofundum boonei T469]
Length=204
Score = 148 bits (373), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 75/203 (37%), Positives = 117/203 (58%), Gaps = 8/203 (3%)
Query 68 AAYDAWYDSPTGRPILATEVAALRPLIEVFAQPRLEIGVGTGRFADLLGVRFGLDPSRDA 127
A YD+WYD + I E+ AL+P++ + P+LEIGVGTGRFA LG+ +G+DP ++
Sbjct 5 AEYDSWYDRH--KEIFDAEIKALKPIVGKYPSPKLEIGVGTGRFAYALGIEYGIDPDKNM 62
Query 128 LMFARRRGVLVANAVGEAVPFVSRHFGAVLMAFTLCFVTDPAAIFRETRRLLADGGGLVI 187
L FA+ RG+ V GE +P+ S+ F VL++ +L F +D + E+ R+L D GG+ I
Sbjct 63 LEFAKNRGIKVKEGYGENLPYKSKRFYLVLISTSLPFFSDARKVIEESYRVLKDEGGIAI 122
Query 188 GFLPRGTPWADLYALRAARGQPGYRDARFYTAAELEQLLADSGFRVIARRCTLHQPPGLA 247
GF+PR + + Y +G +++A FYT E+E LL D F ++ R TL L
Sbjct 123 GFIPRNSYFGKKYTKMGEKGDERFKNAHFYTIDEVESLLEDL-FFIVRIRSTL-----LG 176
Query 248 RYDIEAAHDGIQAGAGFVAISAV 270
+ + +G + A FV + +
Sbjct 177 KDVKKDVVNGYREDASFVVLEGI 199
>gi|337287534|ref|YP_004627007.1| type 11 methyltransferase [Thermodesulfatator indicus DSM 15286]
gi|335360362|gb|AEH46043.1| Methyltransferase type 11 [Thermodesulfatator indicus DSM 15286]
Length=213
Score = 135 bits (339), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 78/208 (38%), Positives = 108/208 (52%), Gaps = 5/208 (2%)
Query 60 SSAAGRDAAAYDAWYDSPTGRPILATEVAALRPLIEVFAQPRLEIGVGTGRFADLLGVRF 119
S + G+ A YD WY+ P+ +E+ AL+ L+ A P LEIGVGTG FA LG F
Sbjct 6 SQSFGQVAQEYDQWYEK---NPLFCSELEALK-LLGKPAYPSLEIGVGTGAFAKALGFNF 61
Query 120 GLDPSRDALMFARRRGVLVANAVGEAVPFVSRHFGAVLMAFTLCFVTDPAAIFRETRRLL 179
GLDPS + L A+ +G+ V + EA+PF S + + FT CF+ +P RE R+L
Sbjct 62 GLDPSLEMLSKAQEKGIKVVAGLAEALPFKSESIASCGLFFTFCFLAEPEKALRECYRIL 121
Query 180 ADGGGLVIGFLPRGTPWADLYALRAARGQPGYRDARFYTAAELEQLLADSGFRVIARRCT 239
G L +GF+P +P Y +A G P Y+ ARF E+ L GF + T
Sbjct 122 QPKGKLFLGFVPAESPLGKFYQEKAQAGHPLYKFARFRRGDEVLNLFERHGFSFLKGFST 181
Query 240 LHQPPGLARYDIEAAHDGIQAGAGFVAI 267
L P + + E H G+ AGF A+
Sbjct 182 LFNFPSI-KPSHEKPHKGLDNKAGFWAV 208
>gi|345301948|ref|YP_004823850.1| type 11 methyltransferase [Rhodothermus marinus SG0.5JP17-172]
gi|345111181|gb|AEN72013.1| Methyltransferase type 11 [Rhodothermus marinus SG0.5JP17-172]
Length=219
Score = 133 bits (334), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 83/188 (45%), Positives = 111/188 (60%), Gaps = 4/188 (2%)
Query 57 MPASSAAGRDAAAYDAWYDSPTGRPILATEVAALRPLIEVFAQPRLEIGVGTGRFADLLG 116
MP ++ + A YDAW++ + A+E+AA+R L + LE+GVGTGRFA LG
Sbjct 1 MPRTAVFEQHAERYDAWFERYPA--VYASELAAVRALWPPVREA-LEVGVGTGRFAVPLG 57
Query 117 VRFGLDPSRDALMFARRRGVLVANAVGEAVPFVSRHFGAVLMAFTLCFVTDPAAIFRETR 176
+R+G++PS A RGV V + V EA+PF R F AVLM TLCFV DP RE
Sbjct 58 IRYGVEPSSAMRRLAAARGVQVMDGVAEALPFPDRRFEAVLMVTTLCFVDDPRQALREAE 117
Query 177 RLLADGGGLVIGFLPRGTPWADLYALRAARGQPGYRDARFYTAAELEQLLADSGFRVIAR 236
R+L GG LVIGF+ R +P Y L R P YR+ARF++A E+ L+ ++GF +
Sbjct 118 RVLRPGGFLVIGFMDRDSPPGRRY-LERHRESPFYREARFFSALEVAVLMQEAGFGELVW 176
Query 237 RCTLHQPP 244
R TL P
Sbjct 177 RQTLFSDP 184
>gi|268315637|ref|YP_003289356.1| type 11 methyltransferase [Rhodothermus marinus DSM 4252]
gi|262333171|gb|ACY46968.1| Methyltransferase type 11 [Rhodothermus marinus DSM 4252]
Length=219
Score = 129 bits (325), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 87/212 (42%), Positives = 120/212 (57%), Gaps = 8/212 (3%)
Query 57 MPASSAAGRDAAAYDAWYDSPTGRPILATEVAALRPLIEVFAQPRLEIGVGTGRFADLLG 116
MP ++ + YDAW++ + A+E+AA+R L + LE+GVGTGRFA LG
Sbjct 1 MPRTTIFDQHVERYDAWFEQHPA--VYASELAAVRTLWPPVREA-LEVGVGTGRFAVPLG 57
Query 117 VRFGLDPSRDALMFARRRGVLVANAVGEAVPFVSRHFGAVLMAFTLCFVTDPAAIFRETR 176
+R+G++PS A RGV V V EA+PF R F AVL+ TLCFV DP RE
Sbjct 58 IRYGVEPSAAMRQKAAARGVQVVAGVAEALPFPDRRFEAVLLVTTLCFVDDPRQALREAY 117
Query 177 RLLADGGGLVIGFLPRGTPWADLYALRAARGQPGYRDARFYTAAELEQLLADSGF-RVIA 235
R+L GG LVIGF+ R +P Y L R P YR+ARF++A+E+ L+ + GF ++
Sbjct 118 RVLRPGGFLVIGFVDRDSPPGRRY-LERHRESPFYREARFFSASEIAALMQEVGFGELVW 176
Query 236 RRCTLHQPPGLARYDIEAAHDGIQAGAGFVAI 267
R+ P + R D +G AGA FV +
Sbjct 177 RQTLFSDPDTMTRPD--PVREGYGAGA-FVVV 205
>gi|288817945|ref|YP_003432292.1| SAM-dependent methyltransferase [Hydrogenobacter thermophilus
TK-6]
gi|288787344|dbj|BAI69091.1| SAM-dependent methyltransferase [Hydrogenobacter thermophilus
TK-6]
gi|308751543|gb|ADO45026.1| Methyltransferase type 11 [Hydrogenobacter thermophilus TK-6]
Length=215
Score = 128 bits (322), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 67/182 (37%), Positives = 101/182 (56%), Gaps = 5/182 (2%)
Query 65 RDAAAYDAWYDSPTGRPILATEVAALRPLIEVFAQP--RLEIGVGTGRFADLLGVRFGLD 122
+ A YD WY+ P G+ E+ L+ L + Q LEIGVG+GRFA LG+++G+D
Sbjct 6 KYALLYDEWYERPFGKSAYKLELECLKSL---YNQKGLSLEIGVGSGRFAQALGIKYGVD 62
Query 123 PSRDALMFARRRGVLVANAVGEAVPFVSRHFGAVLMAFTLCFVTDPAAIFRETRRLLADG 182
S+ L A +RGV A E +PF F + L+ +LCF DP A +E R+L +G
Sbjct 63 TSKGLLRMAHKRGVRPILAKAEELPFKDSVFDSALIVVSLCFFEDPLASLKEAYRVLKEG 122
Query 183 GGLVIGFLPRGTPWADLYALRAARGQPGYRDARFYTAAELEQLLADSGFRVIARRCTLHQ 242
L++G + +PWA+ Y +A +G P Y A+FY+ +L L+ +GF+ TL +
Sbjct 123 SFLLLGLVLSESPWAEFYREKAKKGHPIYSYAKFYSYPQLLSLIQSAGFKKDKAYTTLFE 182
Query 243 PP 244
P
Sbjct 183 EP 184
>gi|119357914|ref|YP_912558.1| methyltransferase type 11 [Chlorobium phaeobacteroides DSM 266]
gi|119355263|gb|ABL66134.1| Methyltransferase type 11 [Chlorobium phaeobacteroides DSM 266]
Length=229
Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 72/203 (36%), Positives = 106/203 (53%), Gaps = 3/203 (1%)
Query 67 AAAYDAWYDSPTGRPILATEVAALRPLIEVFAQPRLEIGVGTGRFADLLGVRFGLDPSRD 126
A YD W+++ G + E+ L+ ++ LE+GVG+GRFA LG+ G DP+
Sbjct 23 AVDYDKWFETAAGANLFQLELDCLKKAVDTKKMRWLEVGVGSGRFACALGITTGADPAPA 82
Query 127 ALMFARRRGVLVANAVGEAVPFVSRHFGAVLMAFTLCFVTDPAAIFRETRRLLADGGGLV 186
+ A RG+ A EA+PF F VL++ +CFV +P E R+L +GG LV
Sbjct 83 MVKIASSRGIETITAPAEALPFNDASFDGVLISCAICFVQNPTQALVECHRVLKEGGQLV 142
Query 187 IGFLPRGTPWADLYALRAARGQPGYRDARFYTAAELEQLLADSGFRVIA-RRCTLHQPPG 245
IGF+P + W + +A R G P Y ARFY++A+L +L +GF A C L P
Sbjct 143 IGFIPSDSRWGEYHAQRGKEGNPFYAAARFYSSAKLRRLTERNGFICNAGYGCMLPSPD- 201
Query 246 LARYDIEAAHDGIQAGAGFVAIS 268
A+ D + H GF+ +S
Sbjct 202 -AQLDNDGLHRKAGMDKGFMVLS 223
>gi|206890019|ref|YP_002249648.1| SAM-dependent methyltransferase, UbiE/COQ5 family [Thermodesulfovibrio
yellowstonii DSM 11347]
gi|206741957|gb|ACI21014.1| SAM-dependent methyltransferase, UbiE/COQ5 family [Thermodesulfovibrio
yellowstonii DSM 11347]
Length=216
Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 64/178 (36%), Positives = 95/178 (54%), Gaps = 0/178 (0%)
Query 67 AAAYDAWYDSPTGRPILATEVAALRPLIEVFAQPRLEIGVGTGRFADLLGVRFGLDPSRD 126
A YDAWYDS G+ + E L+ LI LE+GVGTGRFA L FG+D +
Sbjct 11 ATQYDAWYDSERGKILYENEKKCLKKLINDCNGKVLEVGVGTGRFAVLAEEAFGVDVAEA 70
Query 127 ALMFARRRGVLVANAVGEAVPFVSRHFGAVLMAFTLCFVTDPAAIFRETRRLLADGGGLV 186
L A+ RG+ V A E +PF + F V++ TLCFV DP +E +R+L + G ++
Sbjct 71 PLRIAKLRGIRVIKAKAEELPFRDKVFSCVMLIVTLCFVKDPLLALKEAKRVLKEEGKVI 130
Query 187 IGFLPRGTPWADLYALRAARGQPGYRDARFYTAAELEQLLADSGFRVIARRCTLHQPP 244
IG + + W LYA + G Y+ A FY+ +++++ G ++ TL + P
Sbjct 131 IGDVFLDSEWGKLYAQKKKEGHLFYKLANFYSFENFKKIVSLVGLKIKRVFGTLKKSP 188
>gi|332159397|ref|YP_004424676.1| hypothetical protein PNA2_1757 [Pyrococcus sp. NA2]
gi|331034860|gb|AEC52672.1| hypothetical protein PNA2_1757 [Pyrococcus sp. NA2]
Length=304
Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 73/213 (35%), Positives = 110/213 (52%), Gaps = 7/213 (3%)
Query 57 MPASSAAGRDAAAYDAWYDSPTGRPILATEVAALRPLIEVFAQPRLEIGVGTGRFADLLG 116
MP YD W++ + +E+ A+R ++ ++ +E+GVGTGRFA+ LG
Sbjct 1 MPKIKPFEEHTERYDNWFERH--KYAYLSELNAIREIMP--SRDCVEVGVGTGRFAEPLG 56
Query 117 VRFGLDPSRDALMFARRRGVLVANAVGEAVPFVSRHFGAVLMAFTLCFVTDPAAIFRETR 176
++ G++PS+ A +RG+ V V E +PF +LM T+CFV DP +E
Sbjct 57 IKLGVEPSKKMAEIAEKRGIKVIEGVAENLPFPDNSLDCILMVTTICFVDDPEKAIKEAY 116
Query 177 RLLADGGGLVIGFLPRGTPWADLYALRAARGQPGYRDARFYTAAELEQLLADSGFRVIAR 236
R+L GG ++IGF+ R + Y R YR+ARF++ E+ LL SGF+V
Sbjct 117 RVLKPGGHIIIGFIDRESEIGREYE-RNKEKSVFYREARFFSTREIIDLLEKSGFKVERI 175
Query 237 RCTLHQPPGLARYDIEAAHDGIQAGAGFVAISA 269
TL P + DIE +G G+ FV I A
Sbjct 176 VQTLFHPLNEIK-DIEPVEEGFGKGS-FVGIRA 206
>gi|118580353|ref|YP_901603.1| type 11 methyltransferase [Pelobacter propionicus DSM 2379]
gi|118503063|gb|ABK99545.1| Methyltransferase type 11 [Pelobacter propionicus DSM 2379]
Length=213
Score = 122 bits (307), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 84/214 (40%), Positives = 112/214 (53%), Gaps = 11/214 (5%)
Query 57 MPASSAAGRDAAAYDAWYDSPTGRPILATEVAALRPLIEVFAQPRLEIGVGTGRFADLLG 116
M +S R YDAW++ + E+ AL+ L+ Q +EIGVGTGRFA LG
Sbjct 1 MNNASTFNRHTTEYDAWFERHN--DLYQAELGALQTLVPANGQG-VEIGVGTGRFALPLG 57
Query 117 VRFGLDPSRDALMFARRRGVLVANAVGEAVPFVSRHFGAVLMAFTLCFVTDPAAIFRETR 176
+ G++PS AR RGV V V EA+PF F LM +CF+ D A FRE
Sbjct 58 ISIGVEPSPVMAEVARNRGVEVQEGVAEALPFDDNSFDFALMVTVVCFLDDVARAFREAW 117
Query 177 RLLADGGGLVIGFLPRGTPWADLYALRAARGQPG-YRDARFYTAAELEQLLADSGFRVIA 235
R+L GG LVIGF+ RG+ +Y + +GQ YRDA FY+ +EL ++L ++GF +
Sbjct 118 RILKLGGVLVIGFIDRGSELGRIYEQK--KGQSTFYRDATFYSVSELVEVLRETGFTDFS 175
Query 236 RRCTLHQPPGLARYDIEAAHDGIQAGAGFVAISA 269
R TL +E DG GFV I A
Sbjct 176 FRQTLLPGEPTDATILEGFGDG-----GFVVIRA 204
>gi|14601700|ref|NP_148241.1| hypothetical protein APE_1889 [Aeropyrum pernix K1]
gi|5105581|dbj|BAA80894.1| conserved hypothetical protein [Aeropyrum pernix K1]
Length=224
Score = 122 bits (305), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 71/172 (42%), Positives = 95/172 (56%), Gaps = 3/172 (1%)
Query 70 YDAWYDSPTGRPILATEVAALRPLIEVFAQPRLEIGVGTGRFADLLGVRFGLDPSRDALM 129
YD WY+ R + A E + +E +P LE+GVGTG FA ++G GLDPS L
Sbjct 21 YDKWYEE--NRLLAANEAKTVSRALEGSPRPLLEVGVGTGFFASIVGADAGLDPSLGMLR 78
Query 130 FARRRGV-LVANAVGEAVPFVSRHFGAVLMAFTLCFVTDPAAIFRETRRLLADGGGLVIG 188
AR RG+ L+ VGE +PF SR FG+ L+ TLCF DP + RE R+LA GG LV
Sbjct 79 RARERGIPLLVAGVGERMPFRSRVFGSALIVVTLCFADDPQELLREVWRVLAWGGVLVSC 138
Query 189 FLPRGTPWADLYALRAARGQPGYRDARFYTAAELEQLLADSGFRVIARRCTL 240
+PR + W + Y + G P Y ARF T +L ++GF + + TL
Sbjct 139 IVPRDSSWGEYYEAKGRAGHPFYSKARFITNEMHHTMLKNAGFSLERQYATL 190
>gi|242398685|ref|YP_002994109.1| SAM-dependent methyltransferase, UbiE/COQ5 family [Thermococcus
sibiricus MM 739]
gi|242265078|gb|ACS89760.1| SAM-dependent methyltransferase, UbiE/COQ5 family [Thermococcus
sibiricus MM 739]
Length=213
Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/218 (35%), Positives = 109/218 (50%), Gaps = 6/218 (2%)
Query 57 MPASSAAGRDAAAYDAWYDSPTGRPILATEVAALRPLIEVFAQPRLEIGVGTGRFADLLG 116
MP + Y+ W++ R + +E+ A+R L+ + EIGVGTGRFA LG
Sbjct 1 MPKIEPFEKFTERYEDWFERH--RYVYLSELEAIRKLLPKEGEG-AEIGVGTGRFAAPLG 57
Query 117 VRFGLDPSRDALMFARRRGVLVANAVGEAVPFVSRHFGAVLMAFTLCFVTDPAAIFRETR 176
++ G++PS+ AR +G+ V V E++PF +LM T+CFV DP RE
Sbjct 58 IKLGVEPSKGMAEIAREKGIEVIEGVAESLPFPDESLDYLLMVTTICFVDDPEKALREAY 117
Query 177 RLLADGGGLVIGFLPRGTPWADLYALRAARGQPGYRDARFYTAAELEQLLADSGFRVIAR 236
R+L GG L+IGF+ R +P Y R YR+ARF++ EL +LL GFR
Sbjct 118 RVLKHGGALIIGFVDRNSPIGQEYE-RNKEKSVFYREARFFSTDELLELLGKVGFRKFEM 176
Query 237 RCTLHQPPGLARYDIEAAHDGIQAGAGFVAISAVDQAH 274
TL + ++E G G+ FV I +H
Sbjct 177 IQTLFHKLDEIK-EVEPVKPGYGKGS-FVVIKVFKGSH 212
>gi|333909922|ref|YP_004483655.1| type 11 methyltransferase [Methanotorris igneus Kol 5]
gi|333750511|gb|AEF95590.1| Methyltransferase type 11 [Methanotorris igneus Kol 5]
Length=200
Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 64/186 (35%), Positives = 98/186 (53%), Gaps = 10/186 (5%)
Query 67 AAAYDAWYDSPTGRPILATEVAALRPLIEVFAQPR--LEIGVGTGRFADLLGVRFGLDPS 124
A YD WYD I E+ A+ I + + LEIGVGTGRFA LG+++GL+PS
Sbjct 12 AEDYDKWYDE--NEEIYKLELEAIEKFIPKPKEKKKGLEIGVGTGRFAKPLGIKYGLEPS 69
Query 125 RDALMFARRRGVLVANAVGEAVPFVSRHFGAVLMAFTLCFVTDPAAIFRETRRLLADGGG 184
+ A+RRG+ V + E +PF F VLM TLCF+ DP E +R+L G
Sbjct 70 KSMAEIAKRRGIEVYEGIAENIPFDDGSFDYVLMTTTLCFLNDPIKGLNEIKRILKPNGV 129
Query 185 LVIGFLPRGTPWADLYALRAARGQPGYRDARFYTAAELEQLLADSGFRVIARRCTLHQPP 244
++IG + + +P Y + + + Y++A+FY+ E+ L + F+ I ++ P
Sbjct 130 VIIGMIDKNSPLGIFYESKKEKSK-FYKNAKFYSLNEVLNWLKELEFKNI-----IYNPV 183
Query 245 GLARYD 250
L + D
Sbjct 184 KLDKND 189
>gi|253702658|ref|YP_003023847.1| methyltransferase type 11 [Geobacter sp. M21]
gi|251777508|gb|ACT20089.1| Methyltransferase type 11 [Geobacter sp. M21]
Length=208
Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/206 (38%), Positives = 110/206 (54%), Gaps = 9/206 (4%)
Query 65 RDAAAYDAWYDSPTGRPILATEVAALRPLIEVFAQPRLEIGVGTGRFADLLGVRFGLDPS 124
+ AA YDAW+D + EVAA+R + + +EIGVGTGRFA L + G++PS
Sbjct 9 QQAANYDAWFDIHV--EVFQAEVAAIRAAVPTSGRG-VEIGVGTGRFAISLQIPVGVEPS 65
Query 125 RDALMFARRRGVLVANAVGEAVPFVSRHFGAVLMAFTLCFVTDPAAIFRETRRLLADGGG 184
AR+RG+ V + EA+P F +M +CF+ D A FRE R+L GG
Sbjct 66 SSMAELARQRGIDVLEGIAEALPLPDASFDYAVMVTVVCFLDDVATAFREAWRILKRGGV 125
Query 185 LVIGFLPRGTPWADLYALRAARGQPGYRDARFYTAAELEQLLADSGFRVIARRCTLHQPP 244
LVIGF+ R + Y R + YRDA FY+ +EL +L++++GFR + R TL
Sbjct 126 LVIGFIDRESELGKAYE-RKKKQSEFYRDATFYSVSELVKLMSEAGFRGFSYRQTLLAEE 184
Query 245 GLARYDIEAAHDGIQAGAGFVAISAV 270
+ R ++ H GFV I A+
Sbjct 185 AV-RLNVVGGH----GSGGFVVIRAI 205
>gi|336121436|ref|YP_004576211.1| type 11 methyltransferase [Methanothermococcus okinawensis IH1]
gi|334855957|gb|AEH06433.1| Methyltransferase type 11 [Methanothermococcus okinawensis IH1]
Length=207
Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 60/172 (35%), Positives = 93/172 (55%), Gaps = 5/172 (2%)
Query 65 RDAAAYDAWYDSPTGRPILATEVAALRPLIEVFAQPR--LEIGVGTGRFADLLGVRFGLD 122
R A YD WYD I E+ A++ I + + LEIGVGTGRFA LG+ +GL+
Sbjct 15 RYAKEYDKWYDE--NEQIYKAELDAIKKFIPKSDEKKKGLEIGVGTGRFAKPLGIEYGLE 72
Query 123 PSRDALMFARRRGVLVANAVGEAVPFVSRHFGAVLMAFTLCFVTDPAAIFRETRRLLADG 182
PS+ A++RG+ V + E +PF + VLM TLCF+ DP +E +R+L
Sbjct 73 PSKSMAEIAKKRGINVYEGIAEDIPFDDESYDYVLMTTTLCFLNDPIKGLKEIKRILKPN 132
Query 183 GGLVIGFLPRGTPWADLYALRAARGQPGYRDARFYTAAELEQLLADSGFRVI 234
G L+IG + + +P Y + + + Y+ A+FY+ E+ L + ++ I
Sbjct 133 GVLIIGMIDKNSPLGKFYESKKEKSK-FYKYAKFYSLDEVLNWLKELNYKNI 183
>gi|292490570|ref|YP_003526009.1| methyltransferase type 11 [Nitrosococcus halophilus Nc4]
gi|291579165|gb|ADE13622.1| Methyltransferase type 11 [Nitrosococcus halophilus Nc4]
Length=210
Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/175 (41%), Positives = 97/175 (56%), Gaps = 4/175 (2%)
Query 57 MPASSAAGRDAAAYDAWYDSPTGRPILATEVAALRPLIEVFAQPRLEIGVGTGRFADLLG 116
MP ++ YD W+ +E+ A+R L+ + L IGVGTGRFA LG
Sbjct 1 MPRTTPFELHHRRYDEWFMRHAA--AYHSELLAVRTLLP-WRGLGLSIGVGTGRFAAPLG 57
Query 117 VRFGLDPSRDALMFARRRGVLVANAVGEAVPFVSRHFGAVLMAFTLCFVTDPAAIFRETR 176
V+ G+DP+ + L +A +RGV V ++ EA+PF F L T+CFV D A+ RE
Sbjct 58 VQTGIDPTHEVLAYASKRGVSVVQSIAEALPFTDHSFDYALCVTTICFVDDAGAMLREAH 117
Query 177 RLLADGGGLVIGFLPRGTPWADLYALRAARGQPGYRDARFYTAAELEQLLADSGF 231
R+L G LVIGF+ R + Y A YRDA F++AAE+EQLL D+GF
Sbjct 118 RVLKSSGALVIGFIDRTSELGQHYLAHQAE-NVFYRDATFFSAAEVEQLLHDTGF 171
>gi|117928987|ref|YP_873538.1| type 11 methyltransferase [Acidothermus cellulolyticus 11B]
gi|117649450|gb|ABK53552.1| Methyltransferase type 11 [Acidothermus cellulolyticus 11B]
Length=212
Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/200 (42%), Positives = 101/200 (51%), Gaps = 1/200 (0%)
Query 70 YDAWYDSPTGRPILATEVAALRPLIEVFAQPRLEIGVGTGRFADLLGVRFGLDPSRDALM 129
YD WYD GR A EV ALRP +E PRLE+G G+GRF L + G+DP+ L
Sbjct 13 YDRWYDRDPGRAWFAAEVEALRPFVEPTVHPRLEVGSGSGRFTAALDIDIGIDPAWQPLQ 72
Query 130 FARRRGVLVANAVGEAVPFVSRHFGAVLMAFTLCFVTDPAAIFRETRRLLADGGGLVIGF 189
AR RGV V V E +PF FG V+ TLCFV D +F ETRR+L G +VIG
Sbjct 73 LARCRGVRVLRGVAERLPFRGHVFGVVVFVVTLCFVDDLDRVFAETRRVLRPGAPIVIGV 132
Query 190 LPRGTPWADLYALRAARGQPGYRDARFYTAAELEQLLADSGFRVIARRCTLHQPPGLARY 249
+ P Y G P Y ARF T +L L+ +GF V R L
Sbjct 133 IFAEGPLGRAYRAATELGNPFYAKARFLTWPDLRSALSRAGFAVDGVRSILATHRQGDWR 192
Query 250 DIEAAHDGIQAGAGFVAISA 269
+E DG+ A FVA+SA
Sbjct 193 PVE-VRDGLAKEAAFVALSA 211
>gi|148265482|ref|YP_001232188.1| PAS/PAC sensor-containing diguanylate cyclase [Geobacter uraniireducens
Rf4]
gi|146398982|gb|ABQ27615.1| diguanylate cyclase with PAS/PAC sensor [Geobacter uraniireducens
Rf4]
Length=503
Score = 119 bits (298), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 80/206 (39%), Positives = 111/206 (54%), Gaps = 6/206 (2%)
Query 70 YDAWYDSPTGRPILATEVAALRPLIEVFAQPRLEIGVGTGRFADLLGVRFGLDPSRDALM 129
YD WYD T +E+ A+R L+ + LEIGVG+GRFA LGVR G+DPS L
Sbjct 14 YDNWYD--THGAAYCSELLAVRALLP-WKGLGLEIGVGSGRFAAPLGVRVGVDPSAAMLK 70
Query 130 FARRRGVLVANAVGEAVPFVSRHFGAVLMAFTLCFVTDPAAIFRETRRLLADGGGLVIGF 189
A RG+ V V E +PF + F L+ T+CFV DP A+ RE RR++ G LVIG
Sbjct 71 LASARGISVMRGVAERLPFATASFDYALIVTTICFVDDPRAMLREARRVIKPEGSLVIGL 130
Query 190 LPRGTPWADLYALRAARGQPGYRDARFYTAAELEQLLADSGFRVIARRCTLHQPPGLARY 249
+ +G+ Y L YR+A FY A E+E++L +SGF TL +P R
Sbjct 131 VDKGSALGQQY-LENRSQSAFYREATFYRAEEVEKMLKESGFPSQDWVQTLFRPLQEMR- 188
Query 250 DIEAAHDGIQAGAGFVAISAVDQAHE 275
++E+ G GA F + ++ H+
Sbjct 189 EVESFRAGRGIGA-FAVVRGMESLHD 213
>gi|150401268|ref|YP_001325034.1| methyltransferase type 11 [Methanococcus aeolicus Nankai-3]
gi|150013971|gb|ABR56422.1| Methyltransferase type 11 [Methanococcus aeolicus Nankai-3]
Length=210
Score = 118 bits (296), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 60/195 (31%), Positives = 103/195 (53%), Gaps = 9/195 (4%)
Query 54 DTRMPASSAAGRDAAAYDAWYDSPTGRPILATEVAALRPLI-----EVFAQPRLEIGVGT 108
+ + SS+ A YD+WYD + I EV A++ I E + LEIGVGT
Sbjct 6 NNYLLNSSSFDNYAKEYDSWYDE--NKEIYKLEVKAIKKYIPKSEKENEKEIGLEIGVGT 63
Query 109 GRFADLLGVRFGLDPSRDALMFARRRGVLVANAVGEAVPFVSRHFGAVLMAFTLCFVTDP 168
GRFA + G+++GL+PS+ A+ RG+ + V E +PF + F +LM T+CF+ +P
Sbjct 64 GRFAGVFGIKYGLEPSKSMADIAKYRGIKIYIGVAEELPFDNNFFDYILMTTTICFLNNP 123
Query 169 AAIFRETRRLLADGGGLVIGFLPRGTPWADLYALRAARGQPGYRDARFYTAAELEQLLAD 228
E +R+L G L+IGF+ + + + Y + + Y++A+FY+ ++ +L
Sbjct 124 IKALGEIKRVLKPNGRLIIGFIDKDSLFGRFYESKKDNSKF-YKNAKFYSLNDVLNMLNK 182
Query 229 SGFR-VIARRCTLHQ 242
++ +I + L
Sbjct 183 LNYKNIIYEKVKLKN 197
>gi|18977547|ref|NP_578904.1| hypothetical protein PF1175 [Pyrococcus furiosus DSM 3638]
gi|18893258|gb|AAL81299.1| hypothetical protein PF1175 [Pyrococcus furiosus DSM 3638]
Length=210
Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/213 (34%), Positives = 113/213 (54%), Gaps = 7/213 (3%)
Query 57 MPASSAAGRDAAAYDAWYDSPTGRPILATEVAALRPLIEVFAQPRLEIGVGTGRFADLLG 116
MP + Y+ W++ + +E+ AL+ L+ + +E+G+G+GRFA LG
Sbjct 1 MPKIEPFEKYTERYEEWFER--NKFAYLSELNALKSLLP--TRECVEVGIGSGRFAAPLG 56
Query 117 VRFGLDPSRDALMFARRRGVLVANAVGEAVPFVSRHFGAVLMAFTLCFVTDPAAIFRETR 176
++ G++PS+ AR+RG+ V V E +PF +LM T+CFV DP +E
Sbjct 57 IKMGVEPSKKMAEIARKRGIRVIEGVAENLPFEDNSLDCILMVTTICFVDDPEKAIKEAY 116
Query 177 RLLADGGGLVIGFLPRGTPWADLYALRAARGQPGYRDARFYTAAELEQLLADSGFRVIAR 236
R+L GG +VIGF+ + + Y R + YRDARF++A E+ +LL +GF++
Sbjct 117 RVLKPGGYIVIGFVDKESLIGREYEKRKDK-SVFYRDARFFSAREIMELLERNGFKIDGV 175
Query 237 RCTLHQPPGLARYDIEAAHDGIQAGAGFVAISA 269
TL + R D+E +G G+ FV I A
Sbjct 176 VQTLFKKLDEIR-DVEPVEEGYGRGS-FVVIRA 206
>gi|219850133|ref|YP_002464566.1| type 11 methyltransferase [Chloroflexus aggregans DSM 9485]
gi|219544392|gb|ACL26130.1| Methyltransferase type 11 [Chloroflexus aggregans DSM 9485]
Length=217
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/213 (36%), Positives = 107/213 (51%), Gaps = 6/213 (2%)
Query 57 MPASSAAGRDAAAYDAWYDSPTGRPILATEVAALRPLIEVFAQPRLEIGVGTGRFADLLG 116
M S + A YD W+D I EV ALR L+ +EIG GTGRF+ G
Sbjct 1 MDGVSVFDKHANEYDRWFDE--NETIYQAEVNALRRLVPT-TGVGIEIGAGTGRFSMPFG 57
Query 117 VRFGLDPSRDALMFARRRGVLVANAVGEAVPFVSRHFGAVLMAFTLCFVTDPAAIFRETR 176
+R G++PSR A+ R + + A+GE +PF F L+ +CF D + RE +
Sbjct 58 IRIGVEPSRMMARIAKARNISICQAIGERLPFRDNQFDFALLVTVICFAKDVTRLLREVK 117
Query 177 RLLADGGGLVIGFLPRGTPWADLYALRAARGQPGYRDARFYTAAELEQLLADSGFRVIAR 236
R++ GG +VIGF+ R +P LY R + YR+A FY+ E+ L+ GF +
Sbjct 118 RVIKVGGKVVIGFIDRDSPLGQLYQSRKDTDKF-YREAHFYSVPEILSLVRRVGFGELQF 176
Query 237 RCTLHQPPGLARYDIEAAHDGIQAGAGFVAISA 269
T+ PG + HDG GA FVA+SA
Sbjct 177 CQTVFGLPGNDPMAYQ-VHDGFGKGA-FVALSA 207
>gi|322419700|ref|YP_004198923.1| type 11 methyltransferase [Geobacter sp. M18]
gi|320126087|gb|ADW13647.1| Methyltransferase type 11 [Geobacter sp. M18]
Length=217
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 83/218 (39%), Positives = 114/218 (53%), Gaps = 19/218 (8%)
Query 66 DAAAYDAWYDSPTGRPILATEVAALRPLIEVFAQPRLEIGVGTGRFADLLGVRFGLDPSR 125
+A YDAW++ I E+AA+R + V +EIGVGTGRFA LG+ G++PS
Sbjct 16 NATEYDAWFERH--HDIYQAELAAVRAAVPVTGHG-VEIGVGTGRFAGPLGISVGVEPSP 72
Query 126 DALMFARRRGVLVANAVGEAVPFVSRHFGAVLMAFTLCFVTDPAAIFRETRRLLADGGGL 185
ARRRG+ V E++P F +M +CF+ D A F+ET R+L GG L
Sbjct 73 RMAEIARRRGIEVLEGSAESLPLADNSFDFAVMVTVVCFLDDVAKAFQETWRILKPGGTL 132
Query 186 VIGFLPRGTPWADLYALRAARGQPGYRDARFYTAAELEQLLADSGFRVIARRCTLHQPPG 245
V+GF+ R + +L + + YRDARFY+ EL + LA +GF + R TL PG
Sbjct 133 VVGFIDRES---ELGRTCSQKKSVFYRDARFYSVGELAEWLAKAGFSGFSCRQTLF--PG 187
Query 246 LARYDIEAAHDGIQAGAG---FVAISAVDQAHEPKDDH 280
EA G++ G G FV I A Q E + H
Sbjct 188 ------EATRLGVREGFGTGSFVVIQA--QKQERRQAH 217
>gi|15606491|ref|NP_213871.1| hypothetical protein aq_1270 [Aquifex aeolicus VF5]
gi|2983718|gb|AAC07281.1| hypothetical protein aq_1270 [Aquifex aeolicus VF5]
Length=200
Score = 116 bits (290), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 61/168 (37%), Positives = 90/168 (54%), Gaps = 10/168 (5%)
Query 105 GVGTGRFADLLGVRFGLDPSRDALMFARRRGVLVANAVGEAVPFVSRHFGAVLMAFTLCF 164
G GTGRFA LG+ +G+D S + L A+ RG+ VA A GE +PF S F +V + T+CF
Sbjct 32 GRGTGRFAKALGIEYGVDTSFNMLKVAKERGIKVALAKGENLPFKSETFDSVFLVVTICF 91
Query 165 VTDPAAIFRETRRLLADGGGLVIGFLPRGTPWADLYALRAARGQPGYRDARFYTAAELEQ 224
V +P + +E R+L G L +G + + + WA Y +A G P Y+ ARFY+ EL++
Sbjct 92 VENPKQVLKEAHRVLKRDGKLYLGLILKESKWAKFYEEKAKNGHPFYKHARFYSFFELKE 151
Query 225 LLADSGFRVIARRCTLHQPPGLARYDIEAAHD-----GIQAGAGFVAI 267
++ D F + TL + P D E + G +GF I
Sbjct 152 MVKDI-FSFEEMKSTLLEEPQ----DSEPVKNKEIKPGFYENSGFTCI 194
>gi|206895125|ref|YP_002246375.1| SAM-dependent methyltransferase [Coprothermobacter proteolyticus
DSM 5265]
gi|206737742|gb|ACI16820.1| SAM-dependent methyltransferase, UbiE/COQ5 family [Coprothermobacter
proteolyticus DSM 5265]
Length=211
Score = 115 bits (289), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 63/178 (36%), Positives = 96/178 (54%), Gaps = 4/178 (2%)
Query 65 RDAAAYDAWYDSPTGRPILATEVAALRPLIEVFAQPRLEIGVGTGRFADLLGVRFGLDPS 124
+ A YD W+D + +E+ A+R +I V +EIGVGTGRFA LG++ GL+PS
Sbjct 11 KHAKEYDVWFDE--NELVYLSELEAVRSMIPVDGTG-IEIGVGTGRFAAPLGIKLGLEPS 67
Query 125 RDALMFARRRGVLVANAVGEAVPFVSRHFGAVLMAFTLCFVTDPAAIFRETRRLLADGGG 184
+ AR+RG+ V EA+PF F VLM +CF+ D E R+L GG
Sbjct 68 KSMASLARQRGIEVVEGEAEALPFEDGSFDFVLMVTVICFLNDVGKALSEAYRVLKPGGC 127
Query 185 LVIGFLPRGTPWADLYALRAARGQPGYRDARFYTAAELEQLLADSGFRVIARRCTLHQ 242
+VI F+ + +P +Y R Y++A FY+ E+ +L +GF+ ++ T+ Q
Sbjct 128 IVIAFIDKNSPIGKMYEQRKNE-DVFYKEATFYSVEEVSAVLQQAGFKNLSFCQTVFQ 184
>gi|330506896|ref|YP_004383324.1| methyltransferase [Methanosaeta concilii GP6]
gi|328927704|gb|AEB67506.1| methyltransferase, putative [Methanosaeta concilii GP6]
Length=216
Score = 115 bits (287), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 79/205 (39%), Positives = 108/205 (53%), Gaps = 5/205 (2%)
Query 65 RDAAAYDAWYDSPTGRPILATEVAALRPLIEVFAQPRLEIGVGTGRFADLLGVRFGLDPS 124
+AA YD WYD I +E+ ALR LI + LE+G GTGRFA LG++ G++P+
Sbjct 9 ENAAEYDEWYDENPAAYI--SEIQALRSLIPS-SGTGLEVGAGTGRFAAPLGIKIGVEPA 65
Query 125 RDALMFARRRGVLVANAVGEAVPFVSRHFGAVLMAFTLCFVTDPAAIFRETRRLLADGGG 184
+ AR RG+ V A+ EA+PF F VLM T+CF+ DP +E +R L GG
Sbjct 66 QAMAKRARARGIEVIYALAEALPFRDESFDFVLMVTTVCFLDDPLLACQEAKRTLVPGGS 125
Query 185 LVIGFLPRGTPWADLYALRAARGQPGYRDARFYTAAELEQLLADSGFRVIARRCTLHQPP 244
L+IG + R +P Y R Y+ ARF +A E+ L D F I R T+ +
Sbjct 126 LIIGMIDRDSPAGRDYD-RKKTTSKFYKFARFRSADEVMSWLKDLDFYDILTRQTIFKNS 184
Query 245 GLARYDIEAAHDGIQAGAGFVAISA 269
D E +G GA F+A+SA
Sbjct 185 KTGAVDAEPFTEGHGRGA-FLALSA 208
>gi|14590962|ref|NP_143037.1| hypothetical protein PH1134 [Pyrococcus horikoshii OT3]
gi|3257551|dbj|BAA30234.1| 310aa long hypothetical protein [Pyrococcus horikoshii OT3]
Length=310
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/213 (33%), Positives = 108/213 (51%), Gaps = 7/213 (3%)
Query 57 MPASSAAGRDAAAYDAWYDSPTGRPILATEVAALRPLIEVFAQPRLEIGVGTGRFADLLG 116
MP YD+W++ + +E+ A++ ++ + +E+GVGTGRFA LG
Sbjct 6 MPKIKPFEEHTERYDSWFERH--KYAYLSELNAIKKVLP--EEECIEVGVGTGRFAQPLG 61
Query 117 VRFGLDPSRDALMFARRRGVLVANAVGEAVPFVSRHFGAVLMAFTLCFVTDPAAIFRETR 176
++ G++PSR A +RG+ V + E +PF +LM T+CFV D +E
Sbjct 62 IKIGVEPSRKMAEIAEKRGIKVIEGIAEDLPFPDSSLSCILMVTTICFVDDVEKSIKEAY 121
Query 177 RLLADGGGLVIGFLPRGTPWADLYALRAARGQPGYRDARFYTAAELEQLLADSGFRVIAR 236
R+L GG +VIGF+ + + Y R YR+A+F++ E+ +L SGF+V
Sbjct 122 RVLKPGGYIVIGFIDKNSKIGKEYE-RNKDKSVFYREAKFFSTEEVISILERSGFKVEKI 180
Query 237 RCTLHQPPGLARYDIEAAHDGIQAGAGFVAISA 269
TL + DIE +G G+ FVAI A
Sbjct 181 VQTLFHKLDEIK-DIEPVKEGYGEGS-FVAIRA 211
>gi|327399550|ref|YP_004340419.1| type 11 methyltransferase [Hippea maritima DSM 10411]
gi|327182179|gb|AEA34360.1| Methyltransferase type 11 [Hippea maritima DSM 10411]
Length=316
Score = 113 bits (282), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 106/200 (53%), Gaps = 5/200 (2%)
Query 70 YDAWYDSPTGRPILATEVAALRPLIEVFAQPRLEIGVGTGRFADLLGVRFGLDPSRDALM 129
Y+ W+D + I +E+ L+ +I F + LEIGVG+GRFA LG++ G++PS
Sbjct 120 YEEWFDKYSA--IYESELKMLKAIIPKFERA-LEIGVGSGRFAAPLGIKEGIEPSEKMAQ 176
Query 130 FARRRGVLVANAVGEAVPFVSRHFGAVLMAFTLCFVTDPAAIFRETRRLLADGGGLVIGF 189
A++RG+ V E +PF+ + +L+A T+CFV DP +E R+L GG +V+
Sbjct 177 IAKQRGIKVYPGFAENLPFMDEEYDFILIAVTICFVKDPKKTLKEAYRVLKKGGKIVVAI 236
Query 190 LPRGTPWADLYALRAARGQPGYRDARFYTAAELEQLLADSGFRVIARRCTLHQPPGLARY 249
+ R + Y + +G+ Y+ F++A EL+ +L ++GF TL
Sbjct 237 VDRASEIGKEYLNKKEKGRF-YKYVTFFSAEELQDILKETGFEAENTYQTLFGKSIKEIN 295
Query 250 DIEAAHDGIQAGAGFVAISA 269
++ +G G GFVA+ A
Sbjct 296 SPQSFKEGYGEG-GFVAVVA 314
>gi|167037059|ref|YP_001664637.1| type 11 methyltransferase [Thermoanaerobacter pseudethanolicus
ATCC 33223]
gi|167039773|ref|YP_001662758.1| type 11 methyltransferase [Thermoanaerobacter sp. X514]
gi|256752098|ref|ZP_05492965.1| Methyltransferase type 11 [Thermoanaerobacter ethanolicus CCSD1]
9 more sequence titles
Length=209
Score = 112 bits (279), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 68/213 (32%), Positives = 112/213 (53%), Gaps = 6/213 (2%)
Query 57 MPASSAAGRDAAAYDAWYDSPTGRPILATEVAALRPLIEVFAQPRLEIGVGTGRFADLLG 116
MP SA + Y+ W++ +E+ A++ L+ F + LEIG+GTGRFA L
Sbjct 1 MPKISAFEKHFDRYEEWFEK--NEYAYQSELDAVKLLMPKFVKG-LEIGIGTGRFAVPLN 57
Query 117 VRFGLDPSRDALMFARRRGVLVANAVGEAVPFVSRHFGAVLMAFTLCFVTDPAAIFRETR 176
++ G++PS + A RG+ V + V E +PF F VLM T+CFV D F+E
Sbjct 58 IKNGVEPSSEMRKIALERGLNVVDGVAENLPFEDNSFDLVLMVTTVCFVDDVLKSFKECF 117
Query 177 RLLADGGGLVIGFLPRGTPWADLYALRAARGQPGYRDARFYTAAELEQLLADSGFRVIAR 236
R+L + G ++IGF+ R + +Y + Y++A FY+ +E+ +LL ++GF+
Sbjct 118 RVLKNNGTILIGFVDRESTIGKIYQANKEKS-LFYKEATFYSTSEIVELLYEAGFKNFNF 176
Query 237 RCTLHQPPGLARYDIEAAHDGIQAGAGFVAISA 269
T+ + + + E G G+ F+ ISA
Sbjct 177 SQTIFKKLDEIK-EKEPVRYGFGKGS-FIVISA 207
>gi|188997107|ref|YP_001931358.1| type 11 methyltransferase [Sulfurihydrogenibium sp. YO3AOP1]
gi|188932174|gb|ACD66804.1| Methyltransferase type 11 [Sulfurihydrogenibium sp. YO3AOP1]
Length=215
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/206 (33%), Positives = 110/206 (54%), Gaps = 5/206 (2%)
Query 64 GRDAAAYDAWYDSPTGRPILATEVAALRPLIEVFAQPRLEIGVGTGRFADLLGVRFGLDP 123
+ YD WY+ + + +E+ AL+ I + LEIGVG+GRFA +LG+ +G+DP
Sbjct 12 NKHIKNYDKWYEK--NKYVYLSEIEALKKAIPQ-GKKGLEIGVGSGRFAAVLGIEYGIDP 68
Query 124 SRDALMFARRRGVLVANAVGEAVPFVSRHFGAVLMAFTLCFVTDPAAIFRETRRLLADGG 183
S + L A++RG+ GE +PF F V + T+CFV +P + +E +R+L GG
Sbjct 69 SEEMLKIAQKRGIKTFLGYGEKLPFNDEEFDFVAIIITICFVRNPEKVIKEAKRVLKIGG 128
Query 184 GLVIGFLPRGTPWADLYALRAARGQPGYRDARFYTAAELEQLLADSGFRVIARRCTLHQP 243
L+IG + + + Y + +G Y+ A FY+ E+ ++L GF T+ +P
Sbjct 129 KLIIGIIDKNSRLGQFYLEKKKQGHLFYKYANFYSVDEIVKMLEKYGFGNFKFYQTIFKP 188
Query 244 PGLARYDIEAAHDGIQAGAGFVAISA 269
+ ++E +G G+ FV ISA
Sbjct 189 KEEFK-EVEMPKEGYGEGS-FVVISA 212
>gi|326391285|ref|ZP_08212826.1| Methyltransferase type 11 [Thermoanaerobacter ethanolicus JW
200]
gi|325992680|gb|EGD51131.1| Methyltransferase type 11 [Thermoanaerobacter ethanolicus JW
200]
Length=209
Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/213 (32%), Positives = 112/213 (53%), Gaps = 6/213 (2%)
Query 57 MPASSAAGRDAAAYDAWYDSPTGRPILATEVAALRPLIEVFAQPRLEIGVGTGRFADLLG 116
MP SA + Y+ W++ +E+ A++ L+ F + LE+G+GTG+FA LG
Sbjct 1 MPKISAFEKHFDRYEEWFEK--NEYAYQSELDAVKLLMPKF-EKGLEVGIGTGKFAVPLG 57
Query 117 VRFGLDPSRDALMFARRRGVLVANAVGEAVPFVSRHFGAVLMAFTLCFVTDPAAIFRETR 176
++ G++PS A RG+ V + V E +PF F VLM T+CFV D F+E
Sbjct 58 IKSGVEPSYQMRKIALERGLNVVDGVAENLPFEDNSFDLVLMVTTVCFVDDVLKSFKECF 117
Query 177 RLLADGGGLVIGFLPRGTPWADLYALRAARGQPGYRDARFYTAAELEQLLADSGFRVIAR 236
R+L + G ++IGF+ R + +Y + Y++A FY+ +E+ +LL ++GF+
Sbjct 118 RVLKNSGTILIGFVDRESTIGKIYQANKEKS-LFYKEATFYSTSEIVELLYEAGFKNFNF 176
Query 237 RCTLHQPPGLARYDIEAAHDGIQAGAGFVAISA 269
T+ + + + E G G+ F+ ISA
Sbjct 177 SQTIFKKLDEIK-EKEPVRYGFGKGS-FIVISA 207
>gi|268324767|emb|CBH38355.1| conserved hypothetical protein, methyltransferase type 11 family
[uncultured archaeon]
Length=225
Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/215 (34%), Positives = 112/215 (53%), Gaps = 8/215 (3%)
Query 67 AAAYDAWYDSPTGRPILATEVAALRPLIEVFAQPRLEIGVGTGRFADLLGVRFGLDPSRD 126
A YD W+D +EV AL I ++ LE+GVGTGRFA +G++ G++P+R
Sbjct 11 AEEYDKWFDENM--FAYKSEVLALGKFIPKNSKG-LEVGVGTGRFAAPMGIQMGVEPARA 67
Query 127 ALMFARRRGVLVANAVGEAVPFVSRHFGAVLMAFTLCFVTDPAAIFRETRRLLADGGGLV 186
AR+RG+ V A E +PF + F +LMA T+CF+ +P +E+ R++ GG ++
Sbjct 68 MADIARKRGIEVYEAKAEELPFDNESFDFILMATTICFLQNPMLALQESTRVIKSGGYII 127
Query 187 IGFLPRGTPWADLYALRAARGQPGYRDARFYTAAELEQLLADSGFRVIARRCTLHQPPGL 246
IG + + Y + + YR A FY+ ++ + + G+ I T+ + PG
Sbjct 128 IGMIDSDSFLGKAYESK-KKDSKFYRYAHFYSVNQVLKWVRKLGYCHIKICQTIFKNPGK 186
Query 247 ARYDIEAAHDGIQAGAGFVAISAVDQAHEPKDDHP 281
IE +G G GFV ISA Q E +D HP
Sbjct 187 IT-AIEPVKNGSGRG-GFVVISA--QKDERRDSHP 217
>gi|237808580|ref|YP_002893020.1| Methyltransferase type 11 [Tolumonas auensis DSM 9187]
gi|237500841|gb|ACQ93434.1| Methyltransferase type 11 [Tolumonas auensis DSM 9187]
Length=214
Score = 110 bits (274), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 59/184 (33%), Positives = 97/184 (53%), Gaps = 3/184 (1%)
Query 57 MPASSAAGRDAAAYDAWYDSPTGRPILATEVAALRPLIEVFAQPRLEIGVGTGRFADLLG 116
MP + + + YD W+D + I E+A +R + ++ LE+G+GTGRFA LG
Sbjct 1 MPKTKSFDEHSHEYDQWFDEHS--EIYEAELAIIREFMRSYSGNGLEVGIGTGRFAIPLG 58
Query 117 VRFGLDPSRDALMFARRRGVLVANAVGEAVPFVSRHFGAVLMAFTLCFVTDPAAIFRETR 176
+ G++PS A + G+ V +A+ E +PF F VLM +CF+ D F+E
Sbjct 59 ITTGIEPSAAMAAIAAKSGISVFSAIAEQLPFEDNQFDLVLMVTVICFLDDVLQAFKEAY 118
Query 177 RLLADGGGLVIGFLPRGTPWADLYALRAARGQPGYRDARFYTAAELEQLLADSGFRVIAR 236
R+L GG +++GF+ + + Y + + Y+DA FY+A E+ L +GF +
Sbjct 119 RVLKPGGYILVGFIDKESVLGRQYMEKREKS-LFYQDAVFYSAPEVLSFLRQAGFSSVMS 177
Query 237 RCTL 240
+ TL
Sbjct 178 KQTL 181
>gi|88601569|ref|YP_501747.1| methlytransferase [Methanospirillum hungatei JF-1]
gi|88187031|gb|ABD40028.1| methyltransferase [Methanospirillum hungatei JF-1]
Length=200
Score = 109 bits (273), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 66/192 (35%), Positives = 98/192 (52%), Gaps = 5/192 (2%)
Query 49 LAVTPDTRMPASSAAGRDAAAYDAWYDSPTGRPILATEVAALRPLIEVFAQPRLEIGVGT 108
+ + PD + S A YD W+ R + E+ +R I P LEIGVG+
Sbjct 1 MVIHPD--FMSFSVFEEYADEYDQWF--LDNRDVYLEELKRIREAIGDIPSPALEIGVGS 56
Query 109 GRFADLLGVRFGLDPSRDALMFARRRGVLVANAVGEAVPFVSRHFGAVLMAFTLCFVTDP 168
GRF++ LG+R G++PSR + A+ RG+ V AVGEAVP V+M LCF+ P
Sbjct 57 GRFSEPLGIRHGIEPSRALGLMAKERGIEVIRAVGEAVPMKPGIIWMVVMITVLCFLKKP 116
Query 169 AAIFRETRRLLADGGGLVIGFLPRGTPWADLYALRAARGQPGYRDARFYTAAELEQLLAD 228
FRE R+L G L++ + +G A+ Y R +G+ ARFY E+ ++
Sbjct 117 EETFREVHRILIHNGDLLVACIEKGGIIAERYLARPDKGR-FLSHARFYEHDEVIHMITG 175
Query 229 SGFRVIARRCTL 240
+GF + + C L
Sbjct 176 TGFDITSIDCRL 187
>gi|345018168|ref|YP_004820521.1| type 11 methyltransferase [Thermoanaerobacter wiegelii Rt8.B1]
gi|344033511|gb|AEM79237.1| Methyltransferase type 11 [Thermoanaerobacter wiegelii Rt8.B1]
Length=209
Score = 109 bits (273), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 66/213 (31%), Positives = 112/213 (53%), Gaps = 6/213 (2%)
Query 57 MPASSAAGRDAAAYDAWYDSPTGRPILATEVAALRPLIEVFAQPRLEIGVGTGRFADLLG 116
MP SA + Y+ W+ + +E+ A++ L+ F + LE+G+GTGRFA
Sbjct 1 MPKISAFEKHFDRYEEWF--LENKYAYQSELDAVKLLMPKF-EKGLEVGIGTGRFAVPFN 57
Query 117 VRFGLDPSRDALMFARRRGVLVANAVGEAVPFVSRHFGAVLMAFTLCFVTDPAAIFRETR 176
++ G++PS + A +RG+ V + V E +PF F VLM T+CFV D F+E
Sbjct 58 IKNGVEPSSEMRKIAMQRGLNVVDGVAENLPFGDNSFDLVLMVTTVCFVDDVLKSFKECF 117
Query 177 RLLADGGGLVIGFLPRGTPWADLYALRAARGQPGYRDARFYTAAELEQLLADSGFRVIAR 236
R+L + G ++IGF+ R + +Y + Y++A FY+ +E+ +LL ++GF+
Sbjct 118 RVLKNNGTILIGFVDRESTIGKIYQANKEKS-LFYKEATFYSTSEIVELLYEAGFKNFNF 176
Query 237 RCTLHQPPGLARYDIEAAHDGIQAGAGFVAISA 269
T+ + + + E G G+ F+ ISA
Sbjct 177 SQTIFKKLDEIK-EKEPVRHGFGKGS-FIVISA 207
>gi|297526089|ref|YP_003668113.1| type 11 methyltransferase [Staphylothermus hellenicus DSM 12710]
gi|297255005|gb|ADI31214.1| Methyltransferase type 11 [Staphylothermus hellenicus DSM 12710]
Length=216
Score = 109 bits (272), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 58/146 (40%), Positives = 79/146 (55%), Gaps = 2/146 (1%)
Query 102 LEIGVGTGRFA-DLLGVRFGLDPSRDALMFARRRGVLVANAVGEAVPFVSRHFGAVLMAF 160
L++GVGTG L G+DPS L++A RRG L N+ GE +PF+ +F V++
Sbjct 45 LDVGVGTGILTYGLSKSMVGVDPSEKMLLYASRRGFLTINSFGEELPFIDGYFDTVIVVV 104
Query 161 TLCFVTDPAAIFRETRRLLADGGGLVIGFLPRGTPWADLYALRAARGQP-GYRDARFYTA 219
T+CFV DP + E R+L G LV +P+ + W Y G+ YR ARFYT
Sbjct 105 TICFVNDPLKMLAEINRVLKKNGTLVTCVVPKDSSWGIYYNWLKNSGKSLFYRYARFYTI 164
Query 220 AELEQLLADSGFRVIARRCTLHQPPG 245
EL +L+ +GF V TL PPG
Sbjct 165 QELFYMLSITGFIVKDTCSTLSYPPG 190
>gi|126465628|ref|YP_001040737.1| methyltransferase type 11 [Staphylothermus marinus F1]
gi|126014451|gb|ABN69829.1| Methyltransferase type 11 [Staphylothermus marinus F1]
Length=216
Score = 109 bits (272), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 62/170 (37%), Positives = 87/170 (52%), Gaps = 3/170 (1%)
Query 102 LEIGVGTGRFA-DLLGVRFGLDPSRDALMFARRRGVLVANAVGEAVPFVSRHFGAVLMAF 160
L++GVGTG L G+DPS L++A RRG L N+ GE +PF+ +F +V++
Sbjct 45 LDVGVGTGILTYGLSKSMVGVDPSEKMLLYASRRGFLTINSFGEDLPFIDNYFDSVIVVV 104
Query 161 TLCFVTDPAAIFRETRRLLADGGGLVIGFLPRGTPWADLYALRAARGQP-GYRDARFYTA 219
T+CFV DP + E R+L G LV +P+ + W Y G+ Y+ ARFYT
Sbjct 105 TICFVNDPLKMLSEINRVLKKNGTLVTCVVPKESSWGIYYRWLKNSGKSLFYKYARFYTI 164
Query 220 AELEQLLADSGFRVIARRCTLHQPPGLARYDIEAAHDGIQAGAGFVAISA 269
EL +L+ +GF V TL PP E + +GFV I A
Sbjct 165 QELYYMLSITGFIVKDTCSTLLYPPSTPP-TYEVPVKSLVPDSGFVCIRA 213
>gi|225850884|ref|YP_002731118.1| SAM-dependent methyltransferase, UbiE/COQ5 family [Persephonella
marina EX-H1]
gi|225645706|gb|ACO03892.1| SAM-dependent methyltransferase, UbiE/COQ5 family [Persephonella
marina EX-H1]
Length=209
Score = 108 bits (271), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 65/203 (33%), Positives = 104/203 (52%), Gaps = 13/203 (6%)
Query 70 YDAWYDSPTGRPILATEVAALRPLIEVFAQPR---LEIGVGTGRFADLLGVRFGLDPSRD 126
Y+ W++ R +E+ A++ LI P +EIGVG+GRFA L +++G++PS
Sbjct 14 YEEWFEK--NRYAYLSELNAVKKLI-----PEGKGVEIGVGSGRFAVPLNIKYGVEPSLK 66
Query 127 ALMFARRRGVLVANAVGEAVPFVSRHFGAVLMAFTLCFVTDPAAIFRETRRLLADGGGLV 186
++++G+ V AV E +PF + F L T+CFV D +E R+L G +V
Sbjct 67 MAKISKKKGIFVIRAVAEYLPFKNNSFDFCLFVTTICFVDDIDKSIKEAYRILRKEGKIV 126
Query 187 IGFLPRGTPWADLYALRAARGQPGYRDARFYTAAELEQLLADSGFRVIARRCTLHQPPGL 246
IGF+ + +P Y + P YR A FY+ EL Q+L+ GF T+ +
Sbjct 127 IGFIDKNSPLGVFYE-KIKEKSPFYRYATFYSTEELTQILSQKGFGNFRYLQTVFKKLDD 185
Query 247 ARYDIEAAHDGIQAGAGFVAISA 269
+ +E +G G+ F+ ISA
Sbjct 186 IK-SVEPVKEGYGEGS-FIVISA 206
>gi|337288958|ref|YP_004628430.1| type 11 methyltransferase [Thermodesulfobacterium sp. OPB45]
gi|334902696|gb|AEH23502.1| Methyltransferase type 11 [Thermodesulfobacterium sp. OPB45]
Length=223
Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/209 (32%), Positives = 98/209 (47%), Gaps = 6/209 (2%)
Query 67 AAAYDAWYDSPTGRPILATEVAALRPLIEVFAQPRLEIGVGTGRFADLLGVRFGLDPSRD 126
A YDAWYDS GR + E L LI+ + LEIGVGTGRF+ L G+D +
Sbjct 15 AEKYDAWYDSEEGRILYENEKKCLELLIKD-CEKVLEIGVGTGRFSVLANQAIGVDIAFP 73
Query 127 ALMFARRRGVLVANAVGEAVPFVSRHFGAVLMAFTLCFVTDPAAIFRETRRLLADGGGLV 186
L A+ RG+ V A E +PF + F ++ TL FV D E +R+L G ++
Sbjct 74 PLKIAKNRGIFVIQARAERLPFKDKTFECIMFIVTLSFVEDLVKALLEAKRVLKKNGKII 133
Query 187 IGFLPRGTPWADLYALRAARGQPGYRDARFYTAAELEQLLADSGFRVIARRCTL----HQ 242
I + + + LY + + P Y A FY+ E +++L + G ++ TL +
Sbjct 134 ICEVFKESELGKLYEEKKKKRHPFYSYATFYSFTEFKKILENCGLKINNIYGTLVNYPCK 193
Query 243 PPGLAR-YDIEAAHDGIQAGAGFVAISAV 270
PP L + + GFV + +
Sbjct 194 PPNLESPLKLSLENPYFNKLPGFVCLEVI 222
>gi|57640639|ref|YP_183117.1| SAM-dependent methyltransferase [Thermococcus kodakarensis KOD1]
gi|57158963|dbj|BAD84893.1| SAM-dependent methyltransferase, UbiE/COQ5 family [Thermococcus
kodakarensis KOD1]
Length=209
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/168 (39%), Positives = 86/168 (52%), Gaps = 3/168 (1%)
Query 103 EIGVGTGRFADLLGVRFGLDPSRDALMFARRRGVLVANAVGEAVPFVSRHFGAVLMAFTL 162
EIGVGTGRFA LG++ G++PS+ AR RG+ V E +PF +LM T+
Sbjct 44 EIGVGTGRFAAPLGIKLGVEPSKAMAEIARTRGIEVIEGTAENLPFEEDSMDYLLMVTTI 103
Query 163 CFVTDPAAIFRETRRLLADGGGLVIGFLPRGTPWADLYALRAARGQPGYRDARFYTAAEL 222
CFV DP +E R+L GG L+IGF+ R +P Y Y++ARF++ EL
Sbjct 104 CFVDDPEKALKEAYRVLKPGGALIIGFVDRNSPIGRFYE-EHKNESVFYKEARFFSTEEL 162
Query 223 EQLLADSGFRVIARRCTLHQPPGLARYDIEAAHDGIQAGAGFVAISAV 270
+LL GFR TL + +E G G+ FV I AV
Sbjct 163 LELLKKVGFREFEIVQTLFHRLNEIK-SVEPVKPGYGEGS-FVVIKAV 208
>gi|18313601|ref|NP_560268.1| hypothetical protein PAE2806 [Pyrobaculum aerophilum str. IM2]
gi|18161147|gb|AAL64450.1| conserved hypothetical protein [Pyrobaculum aerophilum str. IM2]
Length=205
Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/209 (40%), Positives = 111/209 (54%), Gaps = 20/209 (9%)
Query 65 RDAAAYDAWYDSPTGRPILATEVAALRPLIEVFAQPRLEIGVGTGRFADLLGVRFGLDPS 124
+ A YDAWY+ RP L + LR + ++ +EIGVGTGRFA LG+R G+DP
Sbjct 6 KRAGDYDAWYEK---RPDLYQ--SELRAVSKIGCIGGVEIGVGTGRFAAPLGLRAGVDPV 60
Query 125 RDALMFARRRGVLVANAVGEAVPFVSRHFGAVLMAFTLCFVTDPAAIFRETRRLLADGGG 184
R+ L A R LV VGE +P + + L+ TLCFV P A+ RE R+
Sbjct 61 REMLRLAPRELDLV-EGVGELLPIRAGAYPCALIVVTLCFVKSPEAVLREAARIAPR--- 116
Query 185 LVIGFLPRGTPWADLYALRAARGQPGYRDARFYTAAELEQL---LADSGFRVIARRCTLH 241
+V +PR +PW LY ARG P Y A+FYT AE+ ++ LA + RV+A TL
Sbjct 117 VVACIVPRESPWGRLYLQLGARGHPFYSKAKFYTVAEVVKMAQGLAPA--RVVA---TLF 171
Query 242 QPP--GLARYDIEAAHDGIQAGAGFVAIS 268
PP G +EA + + GAGF I
Sbjct 172 NPPPGGGIEEPVEATVEEAE-GAGFACIE 199
>gi|20808303|ref|NP_623474.1| SAM-dependent methyltransferase [Thermoanaerobacter tengcongensis
MB4]
gi|20516906|gb|AAM25078.1| SAM-dependent methyltransferases [Thermoanaerobacter tengcongensis
MB4]
Length=212
Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/217 (32%), Positives = 111/217 (52%), Gaps = 12/217 (5%)
Query 56 RMPASSAAGRDAAAYDAWYDSPTGRPILATEVAALRPLIEVFAQPRLEIGVGTGRFADLL 115
+MP S + Y+ W+ +E+ A++ L+ F + LE+G+GTGRFA L
Sbjct 3 KMPKISPFEKHFDRYEEWF--VENEYAYQSELDAVKLLMPKF-EKGLEVGIGTGRFALPL 59
Query 116 GVRFGLDPSRDALMFARRRGVLVANAVGEAVPFVSRHFGAVLMAFTLCFVTDPAAIFRET 175
G++ G++PS A +G+ V V E +PF F VLM T+CFV DP +E
Sbjct 60 GIKNGIEPSLQMRKIAIEKGLNVIEGVAENLPFEDSSFDLVLMVTTICFVDDPLRALKEC 119
Query 176 RRLLADGGGLVIGFLPRGTPWADLYALRAARGQPGYRDARFYTAAELEQLLADSGFRVIA 235
R+L + G ++IGF+ R + +Y + Y++A F+T AE+ +LL ++GF+
Sbjct 120 YRVLKNDGTILIGFVDRDSTIGRIYQANKEKSL-FYKEATFFTTAEIVELLYEAGFKNFN 178
Query 236 RRCTLHQPPGLARYDIEAAHDGIQAGAG---FVAISA 269
T+ + + D + ++ G G FV ISA
Sbjct 179 FSQTIFK-----KLDEIKEKEPVKYGFGKGSFVVISA 210
>gi|217966942|ref|YP_002352448.1| type 11 methyltransferase [Dictyoglomus turgidum DSM 6724]
gi|217336041|gb|ACK41834.1| Methyltransferase type 11 [Dictyoglomus turgidum DSM 6724]
Length=212
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/174 (38%), Positives = 96/174 (56%), Gaps = 3/174 (1%)
Query 70 YDAWYDSPTGRPILATEVAALRPLIEVFAQPRLEIGVGTGRFADLLGVRFGLDPSRDALM 129
YD WY+ R + +EV LR +I + LEIGVGTGRFA LG+ +G+DPS L
Sbjct 11 YDWWYEE--NRWVYLSEVEVLRKVIPK-GKKGLEIGVGTGRFAKELGIEYGIDPSEKMLS 67
Query 130 FARRRGVLVANAVGEAVPFVSRHFGAVLMAFTLCFVTDPAAIFRETRRLLADGGGLVIGF 189
A+ RG+ GE++PF + F V + TLCFV +P + +E++R+L DGG ++IG
Sbjct 68 IAKERGIKGFVGRGESLPFSDKEFDYVALIITLCFVENPDNVIKESKRVLKDGGKIIIGI 127
Query 190 LPRGTPWADLYALRAARGQPGYRDARFYTAAELEQLLADSGFRVIARRCTLHQP 243
+ + + LY + G Y+ A F++ E+ LL FR TL +P
Sbjct 128 IDKNSSLGKLYLEKKKEGHKFYKYATFFSVDEVVDLLKRHDFRDFVFYQTLFKP 181
>gi|256810264|ref|YP_003127633.1| Methyltransferase type 11 [Methanocaldococcus fervens AG86]
gi|256793464|gb|ACV24133.1| Methyltransferase type 11 [Methanocaldococcus fervens AG86]
Length=204
Score = 106 bits (264), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 72/206 (35%), Positives = 109/206 (53%), Gaps = 14/206 (6%)
Query 67 AAAYDAWYDSPTGRPILATEVAALRPLIEVFAQPR---LEIGVGTGRFADLLGVRFGLDP 123
A YD W+D I +EV ALR I P+ LEIGVGTGRFA ++ G+D
Sbjct 8 AEEYDKWFDEH--EIIYKSEVEALRKHI-----PKGKGLEIGVGTGRFAMPFNIKIGVDI 60
Query 124 SRDALMFARRRGVLVANAVGEAVPFVSRHFGAVLMAFTLCFVTDPAAIFRETRRLLADGG 183
S++ A +RG+ V A GE +PF F +L+ L F +P + +E +R+L GG
Sbjct 61 SKEMAKIAEKRGIKVVIAKGEELPFKDEEFDFILINTVLEFAENPKKMLKEAKRVLKKGG 120
Query 184 GLVIGFLPRGTPWADLYALRAARGQPGYRDARFYTAAELEQLLADSGFRVIARRCTLHQP 243
++IG + R + +Y + + + Y+DA+F +A E+ ++L + GF+ I T+ +
Sbjct 121 KIIIGIIDRDSFLGKIYEEKKHKSKF-YKDAKFLSAKEVIEMLKELGFKNIKATQTIFKE 179
Query 244 PGLARYDIEAAHDGIQAGAGFVAISA 269
+ D DG G GFVAISA
Sbjct 180 --FNKIDKVEVKDGYGEG-GFVAISA 202
>gi|343460216|gb|AEM38652.1| Methyltransferase type 11 [Pyrolobus fumarii 1A]
Length=214
Score = 106 bits (264), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 78/202 (39%), Positives = 104/202 (52%), Gaps = 10/202 (4%)
Query 68 AAYDAWYDSPTGRPILATEVAALRPLIEVFAQPR-LEIGVGTGRFADLLGVRFGLDPSRD 126
A YD WY+ R + +EV A+ +E R +E+GVGTGRFA LGV G+DPS
Sbjct 16 ARYDEWYER--NRVLYESEVRAVAKALEGSETLRAVEVGVGTGRFAARLGVLLGIDPSLS 73
Query 127 ALMFARRRGVLVANAVGEAVPFVSRHFGAVLMAFTLCFVTDPAAIFRETRRLLADGGGLV 186
L A+RRGV V VGE +P VL+ TLCFV +P + E R+ +V
Sbjct 74 MLGLAKRRGVDVVQGVGETLPLRGNSLDVVLLVVTLCFVREPQRVLTEAARVARK---VV 130
Query 187 IGFLPRGTPWADLYALRAARGQPGYRDARFYTAAELEQLLADSGFRVIARRCTLH-QPPG 245
+PR +PW +Y R +R P Y+ ARFYT E+ ++ +G V TL+ PPG
Sbjct 131 ACIVPRDSPWGVMYKTRLSR-NPFYKYARFYTVGEVAAIMKGAGLSVERCVSTLYTNPPG 189
Query 246 LARYDIEAAHDGIQAGAGFVAI 267
D+E AGFV I
Sbjct 190 PR--DVEEPRLECSERAGFVCI 209
Lambda K H
0.324 0.138 0.433
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 458372975088
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40