BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv2005c
Length=295
Score E
Sequences producing significant alignments: (Bits) Value
gi|15609142|ref|NP_216521.1| hypothetical protein Rv2005c [Mycob... 582 2e-164
gi|340627015|ref|YP_004745467.1| hypothetical protein MCAN_20251... 576 1e-162
gi|323719497|gb|EGB28624.1| hypothetical protein TMMG_01271 [Myc... 474 5e-132
gi|183982995|ref|YP_001851286.1| hypothetical protein MMAR_2993 ... 452 4e-125
gi|118617760|ref|YP_906092.1| hypothetical protein MUL_2234 [Myc... 447 7e-124
gi|240170461|ref|ZP_04749120.1| hypothetical protein MkanA1_1420... 447 1e-123
gi|296169101|ref|ZP_06850760.1| universal stress protein family ... 382 4e-104
gi|254775163|ref|ZP_05216679.1| hypothetical protein MaviaA2_109... 380 1e-103
gi|41407839|ref|NP_960675.1| hypothetical protein MAP1741c [Myco... 380 1e-103
gi|240171511|ref|ZP_04750170.1| hypothetical protein MkanA1_1951... 377 1e-102
gi|118466349|ref|YP_881699.1| universal stress protein family pr... 375 4e-102
gi|342859710|ref|ZP_08716363.1| hypothetical protein MCOL_12553 ... 375 5e-102
gi|183983460|ref|YP_001851751.1| hypothetical protein MMAR_3477 ... 373 2e-101
gi|296165099|ref|ZP_06847650.1| universal stress protein family ... 334 8e-90
gi|342859721|ref|ZP_08716374.1| hypothetical protein MCOL_12608 ... 332 3e-89
gi|254775151|ref|ZP_05216667.1| hypothetical protein MaviaA2_108... 324 1e-86
gi|41407852|ref|NP_960688.1| hypothetical protein MAP1754c [Myco... 322 4e-86
gi|289754743|ref|ZP_06514121.1| universal stress protein family ... 309 3e-82
gi|340627643|ref|YP_004746095.1| hypothetical protein MCAN_26681... 309 4e-82
gi|15609760|ref|NP_217139.1| hypothetical protein Rv2623 [Mycoba... 309 4e-82
gi|225698003|pdb|3CIS|A Chain A, The Crystal Structure Of Rv2623... 307 1e-81
gi|162329900|pdb|2JAX|A Chain A, Universal Stress Protein Rv2623... 302 3e-80
gi|183982091|ref|YP_001850382.1| hypothetical protein MMAR_2077 ... 300 3e-79
gi|118618611|ref|YP_906943.1| hypothetical protein MUL_3267 [Myc... 298 9e-79
gi|340627037|ref|YP_004745489.1| hypothetical protein MCAN_20491... 297 1e-78
gi|108798076|ref|YP_638273.1| hypothetical protein Mmcs_1104 [My... 292 3e-77
gi|183985380|ref|YP_001853671.1| hypothetical protein MMAR_5410 ... 289 4e-76
gi|15609163|ref|NP_216542.1| hypothetical protein Rv2026c [Mycob... 286 3e-75
gi|240170642|ref|ZP_04749301.1| hypothetical protein MkanA1_1511... 286 3e-75
gi|240170463|ref|ZP_04749122.1| hypothetical protein MkanA1_1421... 286 4e-75
gi|118620046|ref|YP_908378.1| hypothetical protein MUL_5033 [Myc... 285 5e-75
gi|145224961|ref|YP_001135639.1| UspA domain-containing protein ... 278 5e-73
gi|240172801|ref|ZP_04751460.1| hypothetical protein MkanA1_2604... 275 8e-72
gi|108798069|ref|YP_638266.1| hypothetical protein Mmcs_1097 [My... 274 9e-72
gi|296169097|ref|ZP_06850756.1| universal stress protein family ... 272 4e-71
gi|126433730|ref|YP_001069421.1| UspA domain-containing protein ... 270 1e-70
gi|118469207|ref|YP_888229.1| universal stress protein family pr... 270 2e-70
gi|118617761|ref|YP_906093.1| hypothetical protein MUL_2236 [Myc... 263 2e-68
gi|333990935|ref|YP_004523549.1| hypothetical protein JDM601_229... 259 3e-67
gi|296169051|ref|ZP_06850712.1| universal stress protein [Mycoba... 259 4e-67
gi|120402389|ref|YP_952218.1| UspA domain-containing protein [My... 257 1e-66
gi|120402959|ref|YP_952788.1| UspA domain-containing protein [My... 256 2e-66
gi|183982997|ref|YP_001851288.1| hypothetical protein MMAR_2995 ... 255 7e-66
gi|120402436|ref|YP_952265.1| UspA domain-containing protein [My... 254 8e-66
gi|126433324|ref|YP_001069015.1| UspA domain-containing protein ... 254 9e-66
gi|118471745|ref|YP_888239.1| universal stress protein family pr... 254 1e-65
gi|240168804|ref|ZP_04747463.1| hypothetical protein MkanA1_0579... 253 2e-65
gi|108797698|ref|YP_637895.1| hypothetical protein Mmcs_0719 [My... 253 2e-65
gi|108798074|ref|YP_638271.1| hypothetical protein Mmcs_1102 [My... 253 3e-65
gi|333991848|ref|YP_004524462.1| hypothetical protein JDM601_320... 253 3e-65
>gi|15609142|ref|NP_216521.1| hypothetical protein Rv2005c [Mycobacterium tuberculosis H37Rv]
gi|15841487|ref|NP_336524.1| universal stress protein [Mycobacterium tuberculosis CDC1551]
gi|31793185|ref|NP_855678.1| hypothetical protein Mb2028c [Mycobacterium bovis AF2122/97]
79 more sequence titles
Length=295
Score = 582 bits (1500), Expect = 2e-164, Method: Compositional matrix adjust.
Identities = 295/295 (100%), Positives = 295/295 (100%), Gaps = 0/295 (0%)
Query 1 MSKPRKQHGVVVGVDGSLESDAAACWGATDAAMRNIPLTVVHVVNADVATWPPMPYPETW 60
MSKPRKQHGVVVGVDGSLESDAAACWGATDAAMRNIPLTVVHVVNADVATWPPMPYPETW
Sbjct 1 MSKPRKQHGVVVGVDGSLESDAAACWGATDAAMRNIPLTVVHVVNADVATWPPMPYPETW 60
Query 61 GVWQEDEGRQIVANAVKLAKEAVGADRKLSVKSELVFSTPVPTMVEISNEAEMVVLGSSG 120
GVWQEDEGRQIVANAVKLAKEAVGADRKLSVKSELVFSTPVPTMVEISNEAEMVVLGSSG
Sbjct 61 GVWQEDEGRQIVANAVKLAKEAVGADRKLSVKSELVFSTPVPTMVEISNEAEMVVLGSSG 120
Query 121 RGALARGLLGSVSSSLVRRAGCPVAVIHSDDAVIPDPQHAPVLVGIDGSPVSELATAVAF 180
RGALARGLLGSVSSSLVRRAGCPVAVIHSDDAVIPDPQHAPVLVGIDGSPVSELATAVAF
Sbjct 121 RGALARGLLGSVSSSLVRRAGCPVAVIHSDDAVIPDPQHAPVLVGIDGSPVSELATAVAF 180
Query 181 DEASRRGVELIAVHAWSDVEVVELPGLDFSAVQQEAELSLAERLAGWQERYPDVPVSRVV 240
DEASRRGVELIAVHAWSDVEVVELPGLDFSAVQQEAELSLAERLAGWQERYPDVPVSRVV
Sbjct 181 DEASRRGVELIAVHAWSDVEVVELPGLDFSAVQQEAELSLAERLAGWQERYPDVPVSRVV 240
Query 241 VCDRPARKLVQKSASAQLVVVGSHGRGGLTGMLLGSVSNAVLHAARVPVIVARQS 295
VCDRPARKLVQKSASAQLVVVGSHGRGGLTGMLLGSVSNAVLHAARVPVIVARQS
Sbjct 241 VCDRPARKLVQKSASAQLVVVGSHGRGGLTGMLLGSVSNAVLHAARVPVIVARQS 295
>gi|340627015|ref|YP_004745467.1| hypothetical protein MCAN_20251 [Mycobacterium canettii CIPT
140010059]
gi|340005205|emb|CCC44357.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059]
Length=295
Score = 576 bits (1485), Expect = 1e-162, Method: Compositional matrix adjust.
Identities = 292/295 (99%), Positives = 293/295 (99%), Gaps = 0/295 (0%)
Query 1 MSKPRKQHGVVVGVDGSLESDAAACWGATDAAMRNIPLTVVHVVNADVATWPPMPYPETW 60
MSKPRKQHG+VVGVDGSLESDAA CWGATDAAMRNIPLTVVHVVNADVATWPPMPYPETW
Sbjct 1 MSKPRKQHGLVVGVDGSLESDAAVCWGATDAAMRNIPLTVVHVVNADVATWPPMPYPETW 60
Query 61 GVWQEDEGRQIVANAVKLAKEAVGADRKLSVKSELVFSTPVPTMVEISNEAEMVVLGSSG 120
GVWQEDEGRQIVANAVKLAKEAVGADRKLSVKSELVFSTPVPTMVEISNEAEMVVLGSSG
Sbjct 61 GVWQEDEGRQIVANAVKLAKEAVGADRKLSVKSELVFSTPVPTMVEISNEAEMVVLGSSG 120
Query 121 RGALARGLLGSVSSSLVRRAGCPVAVIHSDDAVIPDPQHAPVLVGIDGSPVSELATAVAF 180
RGALARGLLGSVSSSLVRRAGCPVAVIHSD AVIPDPQHAPVLVGIDGSPVSELATAVAF
Sbjct 121 RGALARGLLGSVSSSLVRRAGCPVAVIHSDGAVIPDPQHAPVLVGIDGSPVSELATAVAF 180
Query 181 DEASRRGVELIAVHAWSDVEVVELPGLDFSAVQQEAELSLAERLAGWQERYPDVPVSRVV 240
DEASRRGVELIAVHAWSDVEVVELPGLDFSAVQQEAELSLAERLAGWQERYPDVPVSRVV
Sbjct 181 DEASRRGVELIAVHAWSDVEVVELPGLDFSAVQQEAELSLAERLAGWQERYPDVPVSRVV 240
Query 241 VCDRPARKLVQKSASAQLVVVGSHGRGGLTGMLLGSVSNAVLHAARVPVIVARQS 295
VCDRPARKLVQKSASAQLVVVGSHGRGGLTGMLLGSVSNAVLHAARVPVIVARQS
Sbjct 241 VCDRPARKLVQKSASAQLVVVGSHGRGGLTGMLLGSVSNAVLHAARVPVIVARQS 295
>gi|323719497|gb|EGB28624.1| hypothetical protein TMMG_01271 [Mycobacterium tuberculosis CDC1551A]
Length=242
Score = 474 bits (1221), Expect = 5e-132, Method: Compositional matrix adjust.
Identities = 242/242 (100%), Positives = 242/242 (100%), Gaps = 0/242 (0%)
Query 54 MPYPETWGVWQEDEGRQIVANAVKLAKEAVGADRKLSVKSELVFSTPVPTMVEISNEAEM 113
MPYPETWGVWQEDEGRQIVANAVKLAKEAVGADRKLSVKSELVFSTPVPTMVEISNEAEM
Sbjct 1 MPYPETWGVWQEDEGRQIVANAVKLAKEAVGADRKLSVKSELVFSTPVPTMVEISNEAEM 60
Query 114 VVLGSSGRGALARGLLGSVSSSLVRRAGCPVAVIHSDDAVIPDPQHAPVLVGIDGSPVSE 173
VVLGSSGRGALARGLLGSVSSSLVRRAGCPVAVIHSDDAVIPDPQHAPVLVGIDGSPVSE
Sbjct 61 VVLGSSGRGALARGLLGSVSSSLVRRAGCPVAVIHSDDAVIPDPQHAPVLVGIDGSPVSE 120
Query 174 LATAVAFDEASRRGVELIAVHAWSDVEVVELPGLDFSAVQQEAELSLAERLAGWQERYPD 233
LATAVAFDEASRRGVELIAVHAWSDVEVVELPGLDFSAVQQEAELSLAERLAGWQERYPD
Sbjct 121 LATAVAFDEASRRGVELIAVHAWSDVEVVELPGLDFSAVQQEAELSLAERLAGWQERYPD 180
Query 234 VPVSRVVVCDRPARKLVQKSASAQLVVVGSHGRGGLTGMLLGSVSNAVLHAARVPVIVAR 293
VPVSRVVVCDRPARKLVQKSASAQLVVVGSHGRGGLTGMLLGSVSNAVLHAARVPVIVAR
Sbjct 181 VPVSRVVVCDRPARKLVQKSASAQLVVVGSHGRGGLTGMLLGSVSNAVLHAARVPVIVAR 240
Query 294 QS 295
QS
Sbjct 241 QS 242
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/148 (34%), Positives = 73/148 (50%), Gaps = 16/148 (10%)
Query 4 PRKQHG-VVVGVDGSLESDAAACWGATDAAMRNIPLTVVHV-VNADVATWPPMPYPETWG 61
P QH V+VG+DGS S+ A +A+ R + L VH + +V P + +
Sbjct 102 PDPQHAPVLVGIDGSPVSELATAVAFDEASRRGVELIAVHAWSDVEVVELPGLDFS---A 158
Query 62 VWQEDEGRQIVANAVKLAKEAVGADRK---LSVKSELVFSTPVPTMVEISNEAEMVVLGS 118
V QE E + LA+ G + + V +V P +V+ S A++VV+GS
Sbjct 159 VQQEAE--------LSLAERLAGWQERYPDVPVSRVVVCDRPARKLVQKSASAQLVVVGS 210
Query 119 SGRGALARGLLGSVSSSLVRRAGCPVAV 146
GRG L LLGSVS++++ A PV V
Sbjct 211 HGRGGLTGMLLGSVSNAVLHAARVPVIV 238
>gi|183982995|ref|YP_001851286.1| hypothetical protein MMAR_2993 [Mycobacterium marinum M]
gi|183176321|gb|ACC41431.1| conserved membrane protein [Mycobacterium marinum M]
Length=295
Score = 452 bits (1162), Expect = 4e-125, Method: Compositional matrix adjust.
Identities = 225/295 (77%), Positives = 259/295 (88%), Gaps = 0/295 (0%)
Query 1 MSKPRKQHGVVVGVDGSLESDAAACWGATDAAMRNIPLTVVHVVNADVATWPPMPYPETW 60
MS K+ GVVVGVDGS S+AA CW A DAAMRN+PLTVVHVVN DVATWPPMPYP+TW
Sbjct 1 MSTLGKRLGVVVGVDGSPASNAAVCWAARDAAMRNLPLTVVHVVNTDVATWPPMPYPDTW 60
Query 61 GVWQEDEGRQIVANAVKLAKEAVGADRKLSVKSELVFSTPVPTMVEISNEAEMVVLGSSG 120
VWQEDEGR+++A AVK+A+E+V DR+L++KSE+VFS PVPTMVE+S EAE++V+GSSG
Sbjct 61 AVWQEDEGRKVIAGAVKIAEESVAGDRELTIKSEIVFSLPVPTMVEMSAEAELMVVGSSG 120
Query 121 RGALARGLLGSVSSSLVRRAGCPVAVIHSDDAVIPDPQHAPVLVGIDGSPVSELATAVAF 180
GALAR LLGSVSSSLVRRA CPVAVI +D +IPDP HAPVLVGIDGSP SELATAVAF
Sbjct 121 HGALARVLLGSVSSSLVRRASCPVAVIRDEDPMIPDPLHAPVLVGIDGSPASELATAVAF 180
Query 181 DEASRRGVELIAVHAWSDVEVVELPGLDFSAVQQEAELSLAERLAGWQERYPDVPVSRVV 240
DEASRRGVELIAVHAWSD +VVELPGL++S ++ EA LSLAERLAGW+ERYPDV V RVV
Sbjct 181 DEASRRGVELIAVHAWSDQDVVELPGLNWSTMEAEARLSLAERLAGWEERYPDVTVRRVV 240
Query 241 VCDRPARKLVQKSASAQLVVVGSHGRGGLTGMLLGSVSNAVLHAARVPVIVARQS 295
VCD+PA +LV+ S + QLVVVGSHGRGG+TG+LLGSVSNAV+HA R+PVIVAR S
Sbjct 241 VCDKPAHQLVEMSQTVQLVVVGSHGRGGITGVLLGSVSNAVVHAVRMPVIVARSS 295
>gi|118617760|ref|YP_906092.1| hypothetical protein MUL_2234 [Mycobacterium ulcerans Agy99]
gi|118569870|gb|ABL04621.1| conserved membrane protein [Mycobacterium ulcerans Agy99]
Length=295
Score = 447 bits (1151), Expect = 7e-124, Method: Compositional matrix adjust.
Identities = 224/295 (76%), Positives = 257/295 (88%), Gaps = 0/295 (0%)
Query 1 MSKPRKQHGVVVGVDGSLESDAAACWGATDAAMRNIPLTVVHVVNADVATWPPMPYPETW 60
MS K+ GVVVGVDGS S+AA CW A DAAMRN+PLTVVHVVN DVATWPPMPYP+TW
Sbjct 1 MSTLGKRLGVVVGVDGSPASNAAVCWAARDAAMRNLPLTVVHVVNTDVATWPPMPYPDTW 60
Query 61 GVWQEDEGRQIVANAVKLAKEAVGADRKLSVKSELVFSTPVPTMVEISNEAEMVVLGSSG 120
VWQEDEGR+++A AVK+A+++V DR+L++KSE+VFS PVPTMVE+S EAE++V+GSSG
Sbjct 61 AVWQEDEGRKVIAGAVKIAEDSVAGDRELTIKSEIVFSLPVPTMVEMSAEAELMVVGSSG 120
Query 121 RGALARGLLGSVSSSLVRRAGCPVAVIHSDDAVIPDPQHAPVLVGIDGSPVSELATAVAF 180
GALAR LLGSVSSSLVRRA CPVAVI +D +IPDP HAPVLVGIDGSP SELATAVAF
Sbjct 121 HGALARVLLGSVSSSLVRRASCPVAVIRDEDPMIPDPLHAPVLVGIDGSPASELATAVAF 180
Query 181 DEASRRGVELIAVHAWSDVEVVELPGLDFSAVQQEAELSLAERLAGWQERYPDVPVSRVV 240
DEASRRGVELIAVHAWSD VVELPGL++S ++ EA LSLAERLAGW+ERYPDV V RVV
Sbjct 181 DEASRRGVELIAVHAWSDQGVVELPGLNWSTMEAEARLSLAERLAGWEERYPDVTVRRVV 240
Query 241 VCDRPARKLVQKSASAQLVVVGSHGRGGLTGMLLGSVSNAVLHAARVPVIVARQS 295
VCD PA +LV+ S + QLVVVGSHGRGG+TG+LLGSVSNAV+HA R+PVIVAR S
Sbjct 241 VCDEPAHQLVEMSQTVQLVVVGSHGRGGITGVLLGSVSNAVVHAVRMPVIVARSS 295
>gi|240170461|ref|ZP_04749120.1| hypothetical protein MkanA1_14205 [Mycobacterium kansasii ATCC
12478]
Length=295
Score = 447 bits (1150), Expect = 1e-123, Method: Compositional matrix adjust.
Identities = 222/295 (76%), Positives = 260/295 (89%), Gaps = 0/295 (0%)
Query 1 MSKPRKQHGVVVGVDGSLESDAAACWGATDAAMRNIPLTVVHVVNADVATWPPMPYPETW 60
MS K+ GVVVG DGS S+AA CW A DAAMRN+ LT+VHVV+ DVATWPPMPYP+TW
Sbjct 1 MSILEKRLGVVVGADGSPASNAAVCWAARDAAMRNVQLTIVHVVSTDVATWPPMPYPDTW 60
Query 61 GVWQEDEGRQIVANAVKLAKEAVGADRKLSVKSELVFSTPVPTMVEISNEAEMVVLGSSG 120
VWQEDEGR+I+A A K+A E+V +RKL+VKSE+VFSTPVPTMVE+S EAEM+V+GSSG
Sbjct 61 AVWQEDEGRKILAAAHKIADESVTGERKLTVKSEIVFSTPVPTMVEMSAEAEMIVVGSSG 120
Query 121 RGALARGLLGSVSSSLVRRAGCPVAVIHSDDAVIPDPQHAPVLVGIDGSPVSELATAVAF 180
RGALAR LLGSVSSSLVRRA CPVA+I +D ++PDP HAPVL+GIDGSP SE A AVAF
Sbjct 121 RGALARVLLGSVSSSLVRRARCPVAIIRDEDPLMPDPLHAPVLLGIDGSPASEAAVAVAF 180
Query 181 DEASRRGVELIAVHAWSDVEVVELPGLDFSAVQQEAELSLAERLAGWQERYPDVPVSRVV 240
DEASRRGVELIA+HAWSD+EVVELPGL++SAV+ EA++ LAERLAGWQERYPDV V RVV
Sbjct 181 DEASRRGVELIALHAWSDLEVVELPGLNWSAVEAEAQVLLAERLAGWQERYPDVTVRRVV 240
Query 241 VCDRPARKLVQKSASAQLVVVGSHGRGGLTGMLLGSVSNAVLHAARVPVIVARQS 295
VCDRPAR+LV++S +AQLVVVGSHGRGG+TG+LLGSVSNA++HA R+P+IVAR S
Sbjct 241 VCDRPARQLVERSQTAQLVVVGSHGRGGVTGVLLGSVSNALVHAVRMPLIVARSS 295
>gi|296169101|ref|ZP_06850760.1| universal stress protein family protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295896221|gb|EFG75883.1| universal stress protein family protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=313
Score = 382 bits (981), Expect = 4e-104, Method: Compositional matrix adjust.
Identities = 196/295 (67%), Positives = 241/295 (82%), Gaps = 0/295 (0%)
Query 1 MSKPRKQHGVVVGVDGSLESDAAACWGATDAAMRNIPLTVVHVVNADVATWPPMPYPETW 60
MS +HG+VVGVDGS S+AA CW A DAA+R++PLTVVH+VNA V +P +P
Sbjct 19 MSALANRHGIVVGVDGSPASNAAVCWAARDAALRHVPLTVVHMVNAMVPMYPALPLSTGV 78
Query 61 GVWQEDEGRQIVANAVKLAKEAVGADRKLSVKSELVFSTPVPTMVEISNEAEMVVLGSSG 120
VWQE++G +++ AVK+A +AV DRK+ V+SEL + PVPT+VE+S EAEMVV+GS+G
Sbjct 79 AVWQEEQGGEVLEQAVKIAADAVTTDRKIDVRSELRCAPPVPTLVEMSKEAEMVVVGSNG 138
Query 121 RGALARGLLGSVSSSLVRRAGCPVAVIHSDDAVIPDPQHAPVLVGIDGSPVSELATAVAF 180
RGAL R LLGSVSSS+VR A CPVAV+ +D ++ PQ APVLVG+DGSP SE A AVAF
Sbjct 139 RGALGRLLLGSVSSSVVRGARCPVAVVRDEDPLMEHPQQAPVLVGVDGSPASEAAVAVAF 198
Query 181 DEASRRGVELIAVHAWSDVEVVELPGLDFSAVQQEAELSLAERLAGWQERYPDVPVSRVV 240
DEASRRGV L A+HAWSDV+V ELPG+D+SAV+ EAE SLAE+LAGWQERYPDV V RVV
Sbjct 199 DEASRRGVGLTALHAWSDVDVFELPGVDWSAVKAEAERSLAEQLAGWQERYPDVTVQRVV 258
Query 241 VCDRPARKLVQKSASAQLVVVGSHGRGGLTGMLLGSVSNAVLHAARVPVIVARQS 295
V DRPAR+L+++S +AQLVVVGSHGRGGL+G+LLGSVSNAV+H+ R+PVIVAR S
Sbjct 259 VSDRPARQLIEQSEAAQLVVVGSHGRGGLSGVLLGSVSNAVVHSVRMPVIVARPS 313
>gi|254775163|ref|ZP_05216679.1| hypothetical protein MaviaA2_10906 [Mycobacterium avium subsp.
avium ATCC 25291]
Length=294
Score = 380 bits (977), Expect = 1e-103, Method: Compositional matrix adjust.
Identities = 193/295 (66%), Positives = 236/295 (80%), Gaps = 1/295 (0%)
Query 1 MSKPRKQHGVVVGVDGSLESDAAACWGATDAAMRNIPLTVVHVVNADVATWPPMPYPETW 60
M+ K+ GV+VGVDGS S+ A CW A DAAMRN+PLT+VH+VNA WP +P
Sbjct 1 MAASSKRCGVLVGVDGSPASNFAVCWAARDAAMRNVPLTLVHMVNA-ATVWPQVPMAAEA 59
Query 61 GVWQEDEGRQIVANAVKLAKEAVGADRKLSVKSELVFSTPVPTMVEISNEAEMVVLGSSG 120
WQED+GR+++ AVK+A++A RKL++ +EL + P PT+ ++S EAE+VV+GS+G
Sbjct 60 VAWQEDDGRRVLQEAVKIAEDATRNGRKLAITTELWHAPPAPTLAQLSEEAELVVVGSTG 119
Query 121 RGALARGLLGSVSSSLVRRAGCPVAVIHSDDAVIPDPQHAPVLVGIDGSPVSELATAVAF 180
RGA+ R LLGSVSS LVRRA CPVAVIH +D ++P PQ APVLVGIDGSP SELATA+AF
Sbjct 120 RGAIGRVLLGSVSSGLVRRARCPVAVIHDEDPMMPYPQRAPVLVGIDGSPASELATAIAF 179
Query 181 DEASRRGVELIAVHAWSDVEVVELPGLDFSAVQQEAELSLAERLAGWQERYPDVPVSRVV 240
DEASRRGV+L AVHAWSD +V LPG+D+ AV+ EAE SLAERLAGWQERYPDV V R+V
Sbjct 180 DEASRRGVDLNAVHAWSDTQVFGLPGMDWPAVRSEAERSLAERLAGWQERYPDVTVHRMV 239
Query 241 VCDRPARKLVQKSASAQLVVVGSHGRGGLTGMLLGSVSNAVLHAARVPVIVARQS 295
VCDRPAR+L+++S SAQL VVGSHGRGGL G LLGSVSNAV+H+ R+PVIVAR S
Sbjct 240 VCDRPARQLIEQSESAQLTVVGSHGRGGLAGTLLGSVSNAVVHSVRMPVIVARPS 294
>gi|41407839|ref|NP_960675.1| hypothetical protein MAP1741c [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41396193|gb|AAS04058.1| hypothetical protein MAP_1741c [Mycobacterium avium subsp. paratuberculosis
K-10]
Length=294
Score = 380 bits (976), Expect = 1e-103, Method: Compositional matrix adjust.
Identities = 193/295 (66%), Positives = 236/295 (80%), Gaps = 1/295 (0%)
Query 1 MSKPRKQHGVVVGVDGSLESDAAACWGATDAAMRNIPLTVVHVVNADVATWPPMPYPETW 60
M+ K+ GV+VGVDGS S+ A CW A DAAMRN+PLT+VH+VNA WP +P
Sbjct 1 MAASSKRCGVLVGVDGSPASNFAVCWAARDAAMRNVPLTLVHMVNA-ATVWPQVPMAAEA 59
Query 61 GVWQEDEGRQIVANAVKLAKEAVGADRKLSVKSELVFSTPVPTMVEISNEAEMVVLGSSG 120
WQED+GR+++ AVK+A++A RKL++ +EL + P PT+ ++S EAE+VV+GS+G
Sbjct 60 VAWQEDDGRRVLQEAVKIAEDATRNGRKLAITTELWHAPPAPTLAQLSEEAELVVVGSTG 119
Query 121 RGALARGLLGSVSSSLVRRAGCPVAVIHSDDAVIPDPQHAPVLVGIDGSPVSELATAVAF 180
RGA+ R LLGSVSS LVRRA CPVAVIH +D ++P PQ APVLVGIDGSP SELATA+AF
Sbjct 120 RGAIGRLLLGSVSSGLVRRARCPVAVIHDEDPMMPYPQRAPVLVGIDGSPASELATAIAF 179
Query 181 DEASRRGVELIAVHAWSDVEVVELPGLDFSAVQQEAELSLAERLAGWQERYPDVPVSRVV 240
DEASRRGV+L AVHAWSD +V LPG+D+ AV+ EAE SLAERLAGWQERYPDV V R+V
Sbjct 180 DEASRRGVDLNAVHAWSDTQVFGLPGIDWPAVRSEAERSLAERLAGWQERYPDVTVHRMV 239
Query 241 VCDRPARKLVQKSASAQLVVVGSHGRGGLTGMLLGSVSNAVLHAARVPVIVARQS 295
VCDRPAR+L+++S SAQL VVGSHGRGGL G LLGSVSNAV+H+ R+PVIVAR S
Sbjct 240 VCDRPARQLIEQSESAQLTVVGSHGRGGLAGTLLGSVSNAVVHSVRMPVIVARPS 294
>gi|240171511|ref|ZP_04750170.1| hypothetical protein MkanA1_19511 [Mycobacterium kansasii ATCC
12478]
Length=296
Score = 377 bits (967), Expect = 1e-102, Method: Compositional matrix adjust.
Identities = 192/296 (65%), Positives = 239/296 (81%), Gaps = 7/296 (2%)
Query 6 KQHGVVVGVDGSLESDAAACWGATDAAMRNIPLTVVHVVNADVATWPPMPYPETWGVWQE 65
K+ G+VVGVDGS S+AA W A DA +R++PLT+VH+VNA V WP MP WQE
Sbjct 2 KRLGIVVGVDGSAASNAAVSWAAQDATLRHLPLTLVHMVNAAVPMWPEMPMSMGMAAWQE 61
Query 66 DEGRQIVANAVKLAKEAVGADRKLSVKSELVFSTPVPTMVEISNEAEMVVLGSSGRGALA 125
++GRQ++ AVK+A++AV A R++++ +EL +S PVPT+VE+S EAE+VV+GS GRGA+A
Sbjct 62 EDGRQVLEQAVKIAEQAVQAHREITIHTELRWSPPVPTLVELSAEAELVVVGSYGRGAVA 121
Query 126 RGLLGSVSSSLVRRAGCPVAVIHSDDAVIPDPQH------APVLVGIDGSPVSELATAVA 179
R +LGSV S+L+RRA CPVAV+ D DP H APV+VGIDGSPVSELATA+A
Sbjct 122 RAVLGSVGSALLRRATCPVAVVRDPDPAA-DPAHPAQLPQAPVVVGIDGSPVSELATAIA 180
Query 180 FDEASRRGVELIAVHAWSDVEVVELPGLDFSAVQQEAELSLAERLAGWQERYPDVPVSRV 239
FDEASRRGVEL AVHAWSD+EVV+LPGLD+S V+ EAE ++AERLAGWQERYPDV V R+
Sbjct 181 FDEASRRGVELKAVHAWSDLEVVDLPGLDWSTVKAEAEQTVAERLAGWQERYPDVTVHRL 240
Query 240 VVCDRPARKLVQKSASAQLVVVGSHGRGGLTGMLLGSVSNAVLHAARVPVIVARQS 295
VVCDRPAR+L+ ++ +AQLVV+GSHGRGG TGMLLGSVSNAV+H+ R PVIVAR S
Sbjct 241 VVCDRPARELIDQAQTAQLVVLGSHGRGGFTGMLLGSVSNAVVHSVRTPVIVARPS 296
>gi|118466349|ref|YP_881699.1| universal stress protein family protein [Mycobacterium avium
104]
gi|118167636|gb|ABK68533.1| universal stress protein family protein [Mycobacterium avium
104]
Length=294
Score = 375 bits (964), Expect = 4e-102, Method: Compositional matrix adjust.
Identities = 190/295 (65%), Positives = 234/295 (80%), Gaps = 1/295 (0%)
Query 1 MSKPRKQHGVVVGVDGSLESDAAACWGATDAAMRNIPLTVVHVVNADVATWPPMPYPETW 60
M+ K+ GV+VGVDGS S+ A CW A DAAMRN+PLT+VH+VNA WP +P
Sbjct 1 MAASSKRCGVLVGVDGSPASNFAVCWAARDAAMRNVPLTLVHMVNA-ATVWPQVPMAAEA 59
Query 61 GVWQEDEGRQIVANAVKLAKEAVGADRKLSVKSELVFSTPVPTMVEISNEAEMVVLGSSG 120
WQED+GR+++ AVK+A++A R L++ +EL + P PT+ ++S EAE+VV+GS+G
Sbjct 60 VAWQEDDGRRVLQEAVKIAEDATRNGRNLAITTELWHAPPAPTLAQLSEEAELVVVGSTG 119
Query 121 RGALARGLLGSVSSSLVRRAGCPVAVIHSDDAVIPDPQHAPVLVGIDGSPVSELATAVAF 180
RGA+ R LLGSVSS LVRRA CPVAVIH +D ++P PQ APVLVGIDGSP SELATA+AF
Sbjct 120 RGAIGRLLLGSVSSGLVRRARCPVAVIHDEDPMMPYPQRAPVLVGIDGSPASELATAIAF 179
Query 181 DEASRRGVELIAVHAWSDVEVVELPGLDFSAVQQEAELSLAERLAGWQERYPDVPVSRVV 240
DEA RRGV+L AVHAWSD +V LPG+D+ AV+ +AE SLAERLAGWQERYPDV V R+V
Sbjct 180 DEALRRGVDLNAVHAWSDTQVFGLPGMDWPAVRSQAERSLAERLAGWQERYPDVTVHRMV 239
Query 241 VCDRPARKLVQKSASAQLVVVGSHGRGGLTGMLLGSVSNAVLHAARVPVIVARQS 295
VCDRPAR+L+++S SAQL VVGSHGRGGL G LLGSVSNAV+H+ R+PVIVAR S
Sbjct 240 VCDRPARQLIEQSESAQLTVVGSHGRGGLAGTLLGSVSNAVVHSVRMPVIVARPS 294
>gi|342859710|ref|ZP_08716363.1| hypothetical protein MCOL_12553 [Mycobacterium colombiense CECT
3035]
gi|342132842|gb|EGT86062.1| hypothetical protein MCOL_12553 [Mycobacterium colombiense CECT
3035]
Length=294
Score = 375 bits (963), Expect = 5e-102, Method: Compositional matrix adjust.
Identities = 190/295 (65%), Positives = 230/295 (78%), Gaps = 1/295 (0%)
Query 1 MSKPRKQHGVVVGVDGSLESDAAACWGATDAAMRNIPLTVVHVVNADVATWPPMPYPETW 60
M+ K+HGVVVGVDGS S+ A CW A DAA+RN+PLT+VH+VNA WP +P
Sbjct 1 MTASTKRHGVVVGVDGSPASNFAVCWAARDAALRNVPLTLVHMVNA-TTVWPQVPMAAEA 59
Query 61 GVWQEDEGRQIVANAVKLAKEAVGADRKLSVKSELVFSTPVPTMVEISNEAEMVVLGSSG 120
WQED+GR+++ AVK+A++A R + + SEL + P PT+ +S EA MVV+GS G
Sbjct 60 LAWQEDDGRRLLQEAVKIAEDATRTSRNVDIASELWHAPPAPTLARMSEEAVMVVVGSYG 119
Query 121 RGALARGLLGSVSSSLVRRAGCPVAVIHSDDAVIPDPQHAPVLVGIDGSPVSELATAVAF 180
RGA+ R LLGSVSS +VRRA CPVAVIH +D ++P PQ APVLVGIDGSP SELAT +AF
Sbjct 120 RGAIGRALLGSVSSGIVRRASCPVAVIHDEDPLMPYPQQAPVLVGIDGSPASELATTIAF 179
Query 181 DEASRRGVELIAVHAWSDVEVVELPGLDFSAVQQEAELSLAERLAGWQERYPDVPVSRVV 240
DEASRRGVEL AVHAWSD + ELPG+D +AV+ EAE SL+ERLAGWQERYPDV V R+V
Sbjct 180 DEASRRGVELNAVHAWSDTGIFELPGVDRAAVKSEAERSLSERLAGWQERYPDVTVHRIV 239
Query 241 VCDRPARKLVQKSASAQLVVVGSHGRGGLTGMLLGSVSNAVLHAARVPVIVARQS 295
V DRPAR+LV++S +AQL VVGSHGRG LTG LLGSVSNAV+H+ R+PVIVAR S
Sbjct 240 VSDRPARQLVEQSETAQLTVVGSHGRGCLTGALLGSVSNAVVHSVRMPVIVARPS 294
>gi|183983460|ref|YP_001851751.1| hypothetical protein MMAR_3477 [Mycobacterium marinum M]
gi|183176786|gb|ACC41896.1| conserved hypothetical membrane protein [Mycobacterium marinum
M]
Length=298
Score = 373 bits (958), Expect = 2e-101, Method: Compositional matrix adjust.
Identities = 191/296 (65%), Positives = 228/296 (78%), Gaps = 3/296 (1%)
Query 1 MSKPRKQHGVVVGVDGSLESDAAACWGATDAAMRNIPLTVVHVVNADVATWPPMPYPETW 60
MS P K G+VVGVDGS S AA W A DA +R++PLT+VH+VN V WP MP +
Sbjct 1 MSAPMKHLGIVVGVDGSAASYAAVSWAARDATLRHVPLTLVHMVNQAVPMWPEMPMMTSM 60
Query 61 GVWQEDEGRQIVANAVKLAKEAVGADRKLSVKSELVFSTPVPTMVEISNEAEMVVLGSSG 120
WQE++GRQ++ A K+A+E R +KSEL +S PVPT VE+S EA++VV+GS G
Sbjct 61 SAWQEEDGRQVLEQAGKIAQEVTQQGRDTQIKSELRWSAPVPTFVELSQEADLVVVGSHG 120
Query 121 RGALARGLLGSVSSSLVRRAGCPVAVIHSDDAVIPDPQ---HAPVLVGIDGSPVSELATA 177
RGA+ARGLLGSVSS +V RA CPVAVI +D P P+ APV+VGIDGS SELATA
Sbjct 121 RGAVARGLLGSVSSGVVHRAHCPVAVIRDEDPEAPQPEDRDRAPVVVGIDGSSASELATA 180
Query 178 VAFDEASRRGVELIAVHAWSDVEVVELPGLDFSAVQQEAELSLAERLAGWQERYPDVPVS 237
+AFDEASRRGVEL AVHAWSD+EVV+LPGLD+S V+ EAE +LAERLAGWQERYPDV V
Sbjct 181 IAFDEASRRGVELKAVHAWSDLEVVDLPGLDWSTVKGEAEETLAERLAGWQERYPDVTVD 240
Query 238 RVVVCDRPARKLVQKSASAQLVVVGSHGRGGLTGMLLGSVSNAVLHAARVPVIVAR 293
RVVVCDRPAR+L+ ++ +AQLVV+GSHGRGG T ML+GS SNAVLHA PVIVAR
Sbjct 241 RVVVCDRPARQLIDQAQTAQLVVLGSHGRGGFTSMLVGSTSNAVLHAVHTPVIVAR 296
>gi|296165099|ref|ZP_06847650.1| universal stress protein family protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295899511|gb|EFG78966.1| universal stress protein family protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=296
Score = 334 bits (857), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 185/295 (63%), Positives = 239/295 (82%), Gaps = 2/295 (0%)
Query 1 MSKPRKQHGVVVGVDGSLESDAAACWGATDAAMRNIPLTVVHVVNADVATWPPMPYPETW 60
MS P +Q G+VV VDGS S+AAA W A +A MR +PLTVVH V ATWPP+PYPE+
Sbjct 1 MSAPDQQRGIVVAVDGSPASNAAAIWAAREAGMRRVPLTVVHAVTTPTATWPPVPYPESL 60
Query 61 GVWQEDEGRQIVANAVKLAKEAVGADRKLSVKSELVFSTPVPTMVEISNEAEMVVLGSSG 120
+ EDEG++ + +A+KLA+EA+ ADR++++ ELV+S+P ++++S++AEMVV+G++G
Sbjct 61 AIRLEDEGKKAIMHAIKLAEEALPADRRVAIHRELVYSSPALALIKMSDDAEMVVVGTAG 120
Query 121 RGALARGLLGSVSSSLVRRAGCPVAVIHSDDAVIPDPQHAPVLVGIDGSPVSELATAVAF 180
RG LARG+LGSVS+++VR A CPVAVIH D+ +PD APVLVGIDGSP SELATAVAF
Sbjct 121 RGLLARGVLGSVSATVVRNAHCPVAVIHGDE--LPDRPDAPVLVGIDGSPASELATAVAF 178
Query 181 DEASRRGVELIAVHAWSDVEVVELPGLDFSAVQQEAELSLAERLAGWQERYPDVPVSRVV 240
DEASRRGV+++A+HAWSDV + ELP D++++++EA+ SLAE LAGWQERYPDV V R+V
Sbjct 179 DEASRRGVDVMALHAWSDVAITELPESDWTSLEEEAQRSLAENLAGWQERYPDVSVQRLV 238
Query 241 VCDRPARKLVQKSASAQLVVVGSHGRGGLTGMLLGSVSNAVLHAARVPVIVARQS 295
D PAR+L +KS AQLVVVGSHGRGGL +LLGSVSNAVLH+ R+PVIVAR S
Sbjct 239 ERDEPARQLTEKSEFAQLVVVGSHGRGGLGALLLGSVSNAVLHSVRIPVIVARPS 293
>gi|342859721|ref|ZP_08716374.1| hypothetical protein MCOL_12608 [Mycobacterium colombiense CECT
3035]
gi|342132853|gb|EGT86073.1| hypothetical protein MCOL_12608 [Mycobacterium colombiense CECT
3035]
Length=295
Score = 332 bits (852), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 181/293 (62%), Positives = 228/293 (78%), Gaps = 2/293 (0%)
Query 1 MSKPRKQHGVVVGVDGSLESDAAACWGATDAAMRNIPLTVVHVVNADVATWPPMPYPETW 60
MS P K+ G+VV VDGS S AAA W A +AAMRNIPLTV H V+ AT+PP+PYPE+
Sbjct 1 MSAPVKELGIVVAVDGSPASTAAAGWAAREAAMRNIPLTVAHAVSTPTATFPPVPYPESL 60
Query 61 GVWQEDEGRQIVANAVKLAKEAVGADRKLSVKSELVFSTPVPTMVEISNEAEMVVLGSSG 120
EDEG++ + +A+K+A++A+ A+R + +LV++ P P ++++S+ AEM+V+GSSG
Sbjct 61 VTGLEDEGKKAIMHAMKVAEDAMPAERAAPIGRKLVYAAPTPALLKMSDTAEMIVVGSSG 120
Query 121 RGALARGLLGSVSSSLVRRAGCPVAVIHSDDAVIPDPQHAPVLVGIDGSPVSELATAVAF 180
RG LARGLLGSVSS++VR A CPVAV+ D +PDP+ VL+G DGSP SELAT +AF
Sbjct 121 RGRLARGLLGSVSSAVVRHANCPVAVVR--DGELPDPRDGYVLLGTDGSPASELATEIAF 178
Query 181 DEASRRGVELIAVHAWSDVEVVELPGLDFSAVQQEAELSLAERLAGWQERYPDVPVSRVV 240
DEASRRGV+L+A+HAWSD VVE+ +D+ AV+ EA+ SLAE LAGWQERYPDV V RVV
Sbjct 179 DEASRRGVDLVAIHAWSDAAVVEVFDIDWPAVEGEAQRSLAESLAGWQERYPDVCVHRVV 238
Query 241 VCDRPARKLVQKSASAQLVVVGSHGRGGLTGMLLGSVSNAVLHAARVPVIVAR 293
DR AR L+ K+ AQLVVVGSHGRGGL+ MLLGSVSNAVLHA RVP+IVAR
Sbjct 239 ARDRAARHLIDKADGAQLVVVGSHGRGGLSRMLLGSVSNAVLHAVRVPIIVAR 291
>gi|254775151|ref|ZP_05216667.1| hypothetical protein MaviaA2_10836 [Mycobacterium avium subsp.
avium ATCC 25291]
Length=294
Score = 324 bits (830), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 173/293 (60%), Positives = 221/293 (76%), Gaps = 2/293 (0%)
Query 1 MSKPRKQHGVVVGVDGSLESDAAACWGATDAAMRNIPLTVVHVVNADVATWPPMPYPETW 60
MS P +Q G+ V VDGS S+AAA W A +AAMR+ PLT+VH V+ +PP+PYPE
Sbjct 1 MSAPVQQLGIAVAVDGSPASNAAAYWAAREAAMRHCPLTIVHAVSTPTTMYPPVPYPEAL 60
Query 61 GVWQEDEGRQIVANAVKLAKEAVGADRKLSVKSELVFSTPVPTMVEISNEAEMVVLGSSG 120
EDEG+Q + +A K+A+EA+ ADR++ + +L++S PVP ++E+S M+VLGS+G
Sbjct 61 ATNLEDEGKQAILHATKIAEEAMPADRQVPIGRKLLYSAPVPALLELSGAVRMLVLGSAG 120
Query 121 RGALARGLLGSVSSSLVRRAGCPVAVIHSDDAVIPDPQHAPVLVGIDGSPVSELATAVAF 180
G LARGLLGSVSS++VR A CPVAV+ ++ +PDP APVL+G DGSP SELAT +AF
Sbjct 121 HGLLARGLLGSVSSAVVRHANCPVAVVRDEE--LPDPHSAPVLLGTDGSPASELATEIAF 178
Query 181 DEASRRGVELIAVHAWSDVEVVELPGLDFSAVQQEAELSLAERLAGWQERYPDVPVSRVV 240
DEASRRGV+L+A+HAWSD V E+ +D+ V+ EAE LAE LAGWQERYPDV V R+V
Sbjct 179 DEASRRGVDLVAIHAWSDTAVTEVFEIDWPIVEAEAERHLAESLAGWQERYPDVTVHRLV 238
Query 241 VCDRPARKLVQKSASAQLVVVGSHGRGGLTGMLLGSVSNAVLHAARVPVIVAR 293
DR A+ ++ S +AQLVVVGSHGRGGL +LLGSVSNAVLH+ RVPVIVAR
Sbjct 239 ARDRAAQHIISSSETAQLVVVGSHGRGGLARLLLGSVSNAVLHSVRVPVIVAR 291
>gi|41407852|ref|NP_960688.1| hypothetical protein MAP1754c [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41396206|gb|AAS04071.1| hypothetical protein MAP_1754c [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|336457368|gb|EGO36379.1| universal stress protein UspA-like protein [Mycobacterium avium
subsp. paratuberculosis S397]
Length=294
Score = 322 bits (825), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 172/293 (59%), Positives = 221/293 (76%), Gaps = 2/293 (0%)
Query 1 MSKPRKQHGVVVGVDGSLESDAAACWGATDAAMRNIPLTVVHVVNADVATWPPMPYPETW 60
MS P +Q G+ V VDGS S+AAA W A +AAMR+ PLT+VH V+ +PP+PYPE
Sbjct 1 MSAPVQQLGIAVAVDGSPASNAAAYWAAREAAMRHCPLTIVHAVSTPTTMYPPVPYPEAL 60
Query 61 GVWQEDEGRQIVANAVKLAKEAVGADRKLSVKSELVFSTPVPTMVEISNEAEMVVLGSSG 120
EDEG+Q + +A K+A+EA+ ADR++ + +L++S PVP ++E+S M+VLGS+G
Sbjct 61 ATNLEDEGKQAILHATKIAEEAMPADRQVPIGRKLLYSAPVPALLELSGAVRMLVLGSAG 120
Query 121 RGALARGLLGSVSSSLVRRAGCPVAVIHSDDAVIPDPQHAPVLVGIDGSPVSELATAVAF 180
G LARGLLGSVSS++VR A CPVAV+ ++ +PDP APVL+G DGSP SELAT +AF
Sbjct 121 HGLLARGLLGSVSSAVVRHANCPVAVVRDEE--LPDPHSAPVLLGTDGSPASELATEIAF 178
Query 181 DEASRRGVELIAVHAWSDVEVVELPGLDFSAVQQEAELSLAERLAGWQERYPDVPVSRVV 240
DEASRRGV+L+A+HAWSD V E+ +D+ V+ EAE LAE LAGW+ERYPDV V R+V
Sbjct 179 DEASRRGVDLVAIHAWSDTAVTEVFEIDWPIVEAEAERHLAESLAGWRERYPDVTVHRLV 238
Query 241 VCDRPARKLVQKSASAQLVVVGSHGRGGLTGMLLGSVSNAVLHAARVPVIVAR 293
DR A+ ++ S +AQLVVVGSHGRGGL +LLGSVSNAVLH+ RVPVIVAR
Sbjct 239 ARDRAAQHIISSSETAQLVVVGSHGRGGLARLLLGSVSNAVLHSVRVPVIVAR 291
>gi|289754743|ref|ZP_06514121.1| universal stress protein family [Mycobacterium tuberculosis EAS054]
gi|289695330|gb|EFD62759.1| universal stress protein family [Mycobacterium tuberculosis EAS054]
Length=297
Score = 309 bits (792), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 163/295 (56%), Positives = 211/295 (72%), Gaps = 0/295 (0%)
Query 1 MSKPRKQHGVVVGVDGSLESDAAACWGATDAAMRNIPLTVVHVVNADVATWPPMPYPETW 60
MS G++VG+D S + A W A DA +R IPLT+VH V+ +VATW +P P
Sbjct 1 MSSGNSSLGIIVGIDDSPAAQVAVRWAARDAELRKIPLTLVHTVSPEVATWLEVPLPPGV 60
Query 61 GVWQEDEGRQIVANAVKLAKEAVGADRKLSVKSELVFSTPVPTMVEISNEAEMVVLGSSG 120
WQ+D GR ++ +A+K+ ++A +V SE+V + VPT+V++S +A ++V+G G
Sbjct 61 LRWQQDHGRHLIDDALKVVEQASLRAGPPTVHSEIVPAAAVPTLVDMSKDAVLMVVGCLG 120
Query 121 RGALARGLLGSVSSSLVRRAGCPVAVIHSDDAVIPDPQHAPVLVGIDGSPVSELATAVAF 180
G LLGSVSS L+R A CPV +IH +D+V+P PQ APVLVG+DGS SELATA+AF
Sbjct 121 SGRWPGRLLGSVSSGLLRHAHCPVVIIHDEDSVMPHPQQAPVLVGVDGSSASELATAIAF 180
Query 181 DEASRRGVELIAVHAWSDVEVVELPGLDFSAVQQEAELSLAERLAGWQERYPDVPVSRVV 240
DEASRR V+L+A+HAWSDV+V E PG+D+ A Q AE LAERLAGWQERYP+V ++RVV
Sbjct 181 DEASRRNVDLVALHAWSDVDVSEWPGIDWPATQSMAEQVLAERLAGWQERYPNVAITRVV 240
Query 241 VCDRPARKLVQKSASAQLVVVGSHGRGGLTGMLLGSVSNAVLHAARVPVIVARQS 295
V D+PAR+LVQ+S AQLVVVGS GRGG GML+GSV V AR PVIVAR+S
Sbjct 241 VRDQPARQLVQRSEEAQLVVVGSRGRGGYAGMLVGSVGETVAQLARTPVIVARES 295
>gi|340627643|ref|YP_004746095.1| hypothetical protein MCAN_26681 [Mycobacterium canettii CIPT
140010059]
gi|340005833|emb|CCC44999.1| conserved hypothetical protein TB31.7 [Mycobacterium canettii
CIPT 140010059]
Length=297
Score = 309 bits (791), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 163/295 (56%), Positives = 212/295 (72%), Gaps = 0/295 (0%)
Query 1 MSKPRKQHGVVVGVDGSLESDAAACWGATDAAMRNIPLTVVHVVNADVATWPPMPYPETW 60
MS G++VG+D S + A W A DA +R IPLT+VH V+ +VATW +P P
Sbjct 1 MSSGNSSLGIIVGIDDSPAAQVAVRWAARDAELRKIPLTLVHAVSPEVATWLEVPLPPGV 60
Query 61 GVWQEDEGRQIVANAVKLAKEAVGADRKLSVKSELVFSTPVPTMVEISNEAEMVVLGSSG 120
WQ+D GR+++ +A+K+ ++A +V SE+V + VPT+V++S +A ++V+G G
Sbjct 61 LRWQQDHGRRLIDDALKVVEQASLRAGPPTVHSEIVPAAAVPTLVDMSKDAVLMVVGCLG 120
Query 121 RGALARGLLGSVSSSLVRRAGCPVAVIHSDDAVIPDPQHAPVLVGIDGSPVSELATAVAF 180
G LLGSVSS L+R A CPV +IH +D+V+P PQ APVLVG+DGS SELATA+AF
Sbjct 121 SGRWPGRLLGSVSSGLLRHAHCPVVIIHDEDSVMPHPQQAPVLVGVDGSSASELATAIAF 180
Query 181 DEASRRGVELIAVHAWSDVEVVELPGLDFSAVQQEAELSLAERLAGWQERYPDVPVSRVV 240
DEASRR V+L+A+HAWSDV+V E PG+D+ A Q AE LAERLAGWQERYP+V ++RVV
Sbjct 181 DEASRRNVDLVALHAWSDVDVSEWPGIDWPATQSMAEQVLAERLAGWQERYPNVAITRVV 240
Query 241 VCDRPARKLVQKSASAQLVVVGSHGRGGLTGMLLGSVSNAVLHAARVPVIVARQS 295
V D+PAR+LVQ+S AQLVVVGS GRGG GML+GSV V AR PVIVAR+S
Sbjct 241 VRDQPARQLVQRSEEAQLVVVGSRGRGGYAGMLVGSVGETVAQLARTPVIVARES 295
>gi|15609760|ref|NP_217139.1| hypothetical protein Rv2623 [Mycobacterium tuberculosis H37Rv]
gi|15842163|ref|NP_337200.1| universal stress protein [Mycobacterium tuberculosis CDC1551]
gi|31793809|ref|NP_856302.1| hypothetical protein Mb2656 [Mycobacterium bovis AF2122/97]
75 more sequence titles
Length=297
Score = 309 bits (791), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 163/295 (56%), Positives = 211/295 (72%), Gaps = 0/295 (0%)
Query 1 MSKPRKQHGVVVGVDGSLESDAAACWGATDAAMRNIPLTVVHVVNADVATWPPMPYPETW 60
MS G++VG+D S + A W A DA +R IPLT+VH V+ +VATW +P P
Sbjct 1 MSSGNSSLGIIVGIDDSPAAQVAVRWAARDAELRKIPLTLVHAVSPEVATWLEVPLPPGV 60
Query 61 GVWQEDEGRQIVANAVKLAKEAVGADRKLSVKSELVFSTPVPTMVEISNEAEMVVLGSSG 120
WQ+D GR ++ +A+K+ ++A +V SE+V + VPT+V++S +A ++V+G G
Sbjct 61 LRWQQDHGRHLIDDALKVVEQASLRAGPPTVHSEIVPAAAVPTLVDMSKDAVLMVVGCLG 120
Query 121 RGALARGLLGSVSSSLVRRAGCPVAVIHSDDAVIPDPQHAPVLVGIDGSPVSELATAVAF 180
G LLGSVSS L+R A CPV +IH +D+V+P PQ APVLVG+DGS SELATA+AF
Sbjct 121 SGRWPGRLLGSVSSGLLRHAHCPVVIIHDEDSVMPHPQQAPVLVGVDGSSASELATAIAF 180
Query 181 DEASRRGVELIAVHAWSDVEVVELPGLDFSAVQQEAELSLAERLAGWQERYPDVPVSRVV 240
DEASRR V+L+A+HAWSDV+V E PG+D+ A Q AE LAERLAGWQERYP+V ++RVV
Sbjct 181 DEASRRNVDLVALHAWSDVDVSEWPGIDWPATQSMAEQVLAERLAGWQERYPNVAITRVV 240
Query 241 VCDRPARKLVQKSASAQLVVVGSHGRGGLTGMLLGSVSNAVLHAARVPVIVARQS 295
V D+PAR+LVQ+S AQLVVVGS GRGG GML+GSV V AR PVIVAR+S
Sbjct 241 VRDQPARQLVQRSEEAQLVVVGSRGRGGYAGMLVGSVGETVAQLARTPVIVARES 295
>gi|225698003|pdb|3CIS|A Chain A, The Crystal Structure Of Rv2623 From Mycobacterium Tuberculosis
gi|225698004|pdb|3CIS|B Chain B, The Crystal Structure Of Rv2623 From Mycobacterium Tuberculosis
gi|225698005|pdb|3CIS|C Chain C, The Crystal Structure Of Rv2623 From Mycobacterium Tuberculosis
gi|225698006|pdb|3CIS|D Chain D, The Crystal Structure Of Rv2623 From Mycobacterium Tuberculosis
gi|225698007|pdb|3CIS|E Chain E, The Crystal Structure Of Rv2623 From Mycobacterium Tuberculosis
gi|225698008|pdb|3CIS|F Chain F, The Crystal Structure Of Rv2623 From Mycobacterium Tuberculosis
gi|225698009|pdb|3CIS|G Chain G, The Crystal Structure Of Rv2623 From Mycobacterium Tuberculosis
gi|225698010|pdb|3CIS|H Chain H, The Crystal Structure Of Rv2623 From Mycobacterium Tuberculosis
Length=309
Score = 307 bits (787), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 161/287 (57%), Positives = 209/287 (73%), Gaps = 0/287 (0%)
Query 9 GVVVGVDGSLESDAAACWGATDAAMRNIPLTVVHVVNADVATWPPMPYPETWGVWQEDEG 68
G++VG+D S + A W A DA +R IPLT+VH V+ +VATW +P P WQ+D G
Sbjct 21 GIIVGIDDSPAAQVAVRWAARDAELRKIPLTLVHAVSPEVATWLEVPLPPGVLRWQQDHG 80
Query 69 RQIVANAVKLAKEAVGADRKLSVKSELVFSTPVPTMVEISNEAEMVVLGSSGRGALARGL 128
R ++ +A+K+ ++A +V SE+V + VPT+V++S +A ++V+G G G L
Sbjct 81 RHLIDDALKVVEQASLRAGPPTVHSEIVPAAAVPTLVDMSKDAVLMVVGCLGSGRWPGRL 140
Query 129 LGSVSSSLVRRAGCPVAVIHSDDAVIPDPQHAPVLVGIDGSPVSELATAVAFDEASRRGV 188
LGSVSS L+R A CPV +IH +D+V+P PQ APVLVG+DGS SELATA+AFDEASRR V
Sbjct 141 LGSVSSGLLRHAHCPVVIIHDEDSVMPHPQQAPVLVGVDGSSASELATAIAFDEASRRNV 200
Query 189 ELIAVHAWSDVEVVELPGLDFSAVQQEAELSLAERLAGWQERYPDVPVSRVVVCDRPARK 248
+L+A+HAWSDV+V E PG+D+ A Q AE LAERLAGWQERYP+V ++RVVV D+PAR+
Sbjct 201 DLVALHAWSDVDVSEWPGIDWPATQSMAEQVLAERLAGWQERYPNVAITRVVVRDQPARQ 260
Query 249 LVQKSASAQLVVVGSHGRGGLTGMLLGSVSNAVLHAARVPVIVARQS 295
LVQ+S AQLVVVGS GRGG GML+GSV V AR PVIVAR+S
Sbjct 261 LVQRSEEAQLVVVGSRGRGGYAGMLVGSVGETVAQLARTPVIVARES 307
>gi|162329900|pdb|2JAX|A Chain A, Universal Stress Protein Rv2623 From Mycobaterium Tuberculosis
Length=305
Score = 302 bits (774), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 160/287 (56%), Positives = 205/287 (72%), Gaps = 0/287 (0%)
Query 9 GVVVGVDGSLESDAAACWGATDAAMRNIPLTVVHVVNADVATWPPMPYPETWGVWQEDEG 68
G++VG+D S + A W A DA +R IPLT+VH V+ +VATW +P P WQ+D G
Sbjct 9 GIIVGIDDSPAAQVAVRWAARDAELRKIPLTLVHAVSPEVATWLEVPLPPGVLRWQQDHG 68
Query 69 RQIVANAVKLAKEAVGADRKLSVKSELVFSTPVPTMVEISNEAEMVVLGSSGRGALARGL 128
R ++ +A+K+ ++A +V SE+V + VPT+V+ S +A + V+G G G L
Sbjct 69 RHLIDDALKVVEQASLRAGPPTVHSEIVPAAAVPTLVDXSKDAVLXVVGCLGSGRWPGRL 128
Query 129 LGSVSSSLVRRAGCPVAVIHSDDAVIPDPQHAPVLVGIDGSPVSELATAVAFDEASRRGV 188
LGSVSS L+R A CPV +IH +D+V P PQ APVLVG+DGS SELATA+AFDEASRR V
Sbjct 129 LGSVSSGLLRHAHCPVVIIHDEDSVXPHPQQAPVLVGVDGSSASELATAIAFDEASRRNV 188
Query 189 ELIAVHAWSDVEVVELPGLDFSAVQQEAELSLAERLAGWQERYPDVPVSRVVVCDRPARK 248
+L+A+HAWSDV+V E PG+D+ A Q AE LAERLAGWQERYP+V ++RVVV D+PAR+
Sbjct 189 DLVALHAWSDVDVSEWPGIDWPATQSXAEQVLAERLAGWQERYPNVAITRVVVRDQPARQ 248
Query 249 LVQKSASAQLVVVGSHGRGGLTGMLLGSVSNAVLHAARVPVIVARQS 295
LVQ+S AQLVVVGS GRGG G L+GSV V AR PVIVAR+S
Sbjct 249 LVQRSEEAQLVVVGSRGRGGYAGXLVGSVGETVAQLARTPVIVARES 295
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/142 (33%), Positives = 75/142 (53%), Gaps = 9/142 (6%)
Query 6 KQHGVVVGVDGSLESDAAACWGATDAAMRNIPLTVVHV-VNADVATWPPMPYPETWGVWQ 64
+Q V+VGVDGS S+ A +A+ RN+ L +H + DV+ WP + +P T
Sbjct 158 QQAPVLVGVDGSSASELATAIAFDEASRRNVDLVALHAWSDVDVSEWPGIDWPAT----- 212
Query 65 EDEGRQIVANAVKLAKEAVGADRKLSVKSELVFSTPVPTMVEISNEAEMVVLGSSGRGAL 124
+ Q++A + +E +++ +V P +V+ S EA++VV+GS GRG
Sbjct 213 QSXAEQVLAERLAGWQERYP---NVAITRVVVRDQPARQLVQRSEEAQLVVVGSRGRGGY 269
Query 125 ARGLLGSVSSSLVRRAGCPVAV 146
A L+GSV ++ + A PV V
Sbjct 270 AGXLVGSVGETVAQLARTPVIV 291
>gi|183982091|ref|YP_001850382.1| hypothetical protein MMAR_2077 [Mycobacterium marinum M]
gi|183175417|gb|ACC40527.1| conserved hypothetical protein [Mycobacterium marinum M]
Length=297
Score = 300 bits (767), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 161/295 (55%), Positives = 202/295 (69%), Gaps = 0/295 (0%)
Query 1 MSKPRKQHGVVVGVDGSLESDAAACWGATDAAMRNIPLTVVHVVNADVATWPPMPYPETW 60
MS ++ G++VG+D S + A W +A +RN PLT+VH ++ DVATW P P
Sbjct 1 MSSQNQRLGIIVGIDDSPAAKEAIQWATREAELRNAPLTLVHAISPDVATWLNKPLPPGL 60
Query 61 GVWQEDEGRQIVANAVKLAKEAVGADRKLSVKSELVFSTPVPTMVEISNEAEMVVLGSSG 120
WQ D G Q+V +A+K+ +EA + SE+V S VP +V++S +AEMVV G G
Sbjct 61 ARWQRDHGHQLVEDALKVIEEAAERGGPAGLGSEIVPSAAVPALVDMSKDAEMVVTGCHG 120
Query 121 RGALARGLLGSVSSSLVRRAGCPVAVIHSDDAVIPDPQHAPVLVGIDGSPVSELATAVAF 180
G LGSVSS L+R A CPVA++H +DA PD APVLVGIDGS SE AT +AF
Sbjct 121 SGRWPGRPLGSVSSGLLRYAHCPVAIVHDEDASAPDRAAAPVLVGIDGSRASEFATGLAF 180
Query 181 DEASRRGVELIAVHAWSDVEVVELPGLDFSAVQQEAELSLAERLAGWQERYPDVPVSRVV 240
DEASRR L+A H+WSDV+V E PG+D+ A Q AE LAERLAGWQE+YPDV VSRVV
Sbjct 181 DEASRRHTGLVAAHSWSDVDVSEWPGIDWPATQSMAEQVLAERLAGWQEQYPDVSVSRVV 240
Query 241 VCDRPARKLVQKSASAQLVVVGSHGRGGLTGMLLGSVSNAVLHAARVPVIVARQS 295
D+PAR+LVQ+S AQLVVVGS GRGG GM++GSV+ +V ARVPVIVAR+S
Sbjct 241 ARDQPARQLVQRSGEAQLVVVGSRGRGGFAGMVVGSVAESVAQLARVPVIVARES 295
>gi|118618611|ref|YP_906943.1| hypothetical protein MUL_3267 [Mycobacterium ulcerans Agy99]
gi|118570721|gb|ABL05472.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99]
Length=297
Score = 298 bits (762), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 160/295 (55%), Positives = 201/295 (69%), Gaps = 0/295 (0%)
Query 1 MSKPRKQHGVVVGVDGSLESDAAACWGATDAAMRNIPLTVVHVVNADVATWPPMPYPETW 60
MS ++ G++VG+D S + A W +A +RN PLT+VH ++ DVATW P P
Sbjct 1 MSSQNQRLGIIVGIDDSPAAKVAIQWATREAELRNAPLTLVHAISPDVATWLNKPLPPGL 60
Query 61 GVWQEDEGRQIVANAVKLAKEAVGADRKLSVKSELVFSTPVPTMVEISNEAEMVVLGSSG 120
WQ D G Q+V +A+K+ +EA + SE+V VP +V++S +AEMVV G G
Sbjct 61 ARWQRDHGHQLVEDALKVIEEAAERGGPAGLGSEIVPPAAVPALVDMSKDAEMVVTGCHG 120
Query 121 RGALARGLLGSVSSSLVRRAGCPVAVIHSDDAVIPDPQHAPVLVGIDGSPVSELATAVAF 180
G LGSVSS L+R A CPVA++H +DA PD APVLVGIDGS SE AT +AF
Sbjct 121 SGRWPDRPLGSVSSGLLRYAHCPVAIVHDEDASAPDRAAAPVLVGIDGSRASEFATGLAF 180
Query 181 DEASRRGVELIAVHAWSDVEVVELPGLDFSAVQQEAELSLAERLAGWQERYPDVPVSRVV 240
DEASRR L+A H+WSDV+V E PG+D+ A Q AE LAERLAGWQE+YPDV VSRVV
Sbjct 181 DEASRRHTGLVAAHSWSDVDVSEWPGIDWPATQSMAEQVLAERLAGWQEQYPDVSVSRVV 240
Query 241 VCDRPARKLVQKSASAQLVVVGSHGRGGLTGMLLGSVSNAVLHAARVPVIVARQS 295
D+PAR+LVQ+S AQLVVVGS GRGG GM++GSV+ +V ARVPVIVAR+S
Sbjct 241 ARDQPARQLVQRSGEAQLVVVGSRGRGGFAGMVVGSVAESVAQLARVPVIVARES 295
>gi|340627037|ref|YP_004745489.1| hypothetical protein MCAN_20491 [Mycobacterium canettii CIPT
140010059]
gi|340005227|emb|CCC44381.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059]
Length=294
Score = 297 bits (761), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 152/295 (52%), Positives = 207/295 (71%), Gaps = 1/295 (0%)
Query 1 MSKPRKQHGVVVGVDGSLESDAAACWGATDAAMRNIPLTVVHVVNADVATWPPMPYPETW 60
MS ++G++VGVDGS +S+AA W A + MR +P+T++H+V V WP
Sbjct 1 MSAATAKYGILVGVDGSAQSNAAVAWAAREGVMRQLPITLLHIVAPVVVGWPVGQLYANM 60
Query 61 GVWQEDEGRQIVANAVKLAKEAVGADRKLSVKSELVFSTPVPTMVEISNEAEMVVLGSSG 120
WQ+D +Q++ A + ++G + V +ELVFS VPT+++ S +A ++V+GS G
Sbjct 61 TEWQKDNAQQVIEQAREALTNSLGESKPPQVHTELVFSNVVPTLIDASQQAWLMVVGSQG 120
Query 121 RGALARGLLGSVSSSLVRRAGCPVAVIHSDDAVIPDPQHAPVLVGIDGSPVSELATAVAF 180
GAL R LLGS+S++L+ A CPVA+IHS + PD APVLVGIDGSP SE ATA+AF
Sbjct 121 MGALGRLLLGSISTALLHHARCPVAIIHSGNGATPDFD-APVLVGIDGSPASEAATALAF 179
Query 181 DEASRRGVELIAVHAWSDVEVVELPGLDFSAVQQEAELSLAERLAGWQERYPDVPVSRVV 240
DEASRR V+L+A+HAW+D+ + + G+D+ ++ LAERLAGWQE+YPDV V R +
Sbjct 180 DEASRRRVDLVALHAWTDLGMFPVLGMDWREREKREAEVLAERLAGWQEQYPDVRVHRSL 239
Query 241 VCDRPARKLVQKSASAQLVVVGSHGRGGLTGMLLGSVSNAVLHAARVPVIVARQS 295
VCD+PAR L++ S AQLVVVGSHGRGG +GMLLGSVS+AV H+ R+PVIV R S
Sbjct 240 VCDKPARWLLEHSERAQLVVVGSHGRGGFSGMLLGSVSSAVAHSVRIPVIVVRPS 294
>gi|108798076|ref|YP_638273.1| hypothetical protein Mmcs_1104 [Mycobacterium sp. MCS]
gi|119867172|ref|YP_937124.1| UspA domain-containing protein [Mycobacterium sp. KMS]
gi|126433736|ref|YP_001069427.1| UspA domain-containing protein [Mycobacterium sp. JLS]
gi|108768495|gb|ABG07217.1| UspA [Mycobacterium sp. MCS]
gi|119693261|gb|ABL90334.1| UspA domain protein [Mycobacterium sp. KMS]
gi|126233536|gb|ABN96936.1| UspA domain protein [Mycobacterium sp. JLS]
Length=295
Score = 292 bits (748), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 160/290 (56%), Positives = 204/290 (71%), Gaps = 1/290 (0%)
Query 7 QHGVVVGVDGSLESDAAACWGATDAAMRNIPLTVVHVV-NADVATWPPMPYPETWGVWQE 65
G+VVGVDGS + A W A +AA R++PLT+VHV+ + +V W +P + + E
Sbjct 6 NQGIVVGVDGSPQGMRAVTWAAREAAGRDVPLTLVHVLPDTEVRMWLDVPPTDEFWRTVE 65
Query 66 DEGRQIVANAVKLAKEAVGADRKLSVKSELVFSTPVPTMVEISNEAEMVVLGSSGRGALA 125
+ R+I + AVK A+ AV L+V+ V VPT+V++S +AEMVV+GS G GA+
Sbjct 66 HQNREIQSEAVKTAEAAVAGTGSLTVRQRSVSGNAVPTLVDLSKDAEMVVVGSRGLGAIG 125
Query 126 RGLLGSVSSSLVRRAGCPVAVIHSDDAVIPDPQHAPVLVGIDGSPVSELATAVAFDEASR 185
+ +LGSVS LV A CPVAVIH D+ P+ APV+VGIDGSP SELATA+AFD+ASR
Sbjct 126 QRILGSVSRGLVHHAHCPVAVIHDDEPDAPERDRAPVVVGIDGSPASELATAIAFDQASR 185
Query 186 RGVELIAVHAWSDVEVVELPGLDFSAVQQEAELSLAERLAGWQERYPDVPVSRVVVCDRP 245
R VELIAVHAWSD + P ++ + +A+ LAERLAGW +RYPDVPV RVVV D+
Sbjct 186 RKVELIAVHAWSDPTIYAFPNEEWMTFKPQADEVLAERLAGWADRYPDVPVQRVVVRDKA 245
Query 246 ARKLVQKSASAQLVVVGSHGRGGLTGMLLGSVSNAVLHAARVPVIVARQS 295
+L+++S AQLVVVGSHGRGG GMLLGSVS+AV AARVPVIVARQS
Sbjct 246 VHQLLEQSEHAQLVVVGSHGRGGFAGMLLGSVSSAVAQAARVPVIVARQS 295
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/145 (34%), Positives = 72/145 (50%), Gaps = 13/145 (8%)
Query 5 RKQHGVVVGVDGSLESDAAACWGATDAAMRNIPLTVVHV-VNADVATWPPMPYPETWGVW 63
R + VVVG+DGS S+ A A+ R + L VH + + +P E W +
Sbjct 157 RDRAPVVVGIDGSPASELATAIAFDQASRRKVELIAVHAWSDPTIYAFP----NEEWMTF 212
Query 64 QEDEGRQIVANAVKLAKEAVGADR--KLSVKSELVFSTPVPTMVEISNEAEMVVLGSSGR 121
+ A+ V + A ADR + V+ +V V ++E S A++VV+GS GR
Sbjct 213 KPQ------ADEVLAERLAGWADRYPDVPVQRVVVRDKAVHQLLEQSEHAQLVVVGSHGR 266
Query 122 GALARGLLGSVSSSLVRRAGCPVAV 146
G A LLGSVSS++ + A PV V
Sbjct 267 GGFAGMLLGSVSSAVAQAARVPVIV 291
>gi|183985380|ref|YP_001853671.1| hypothetical protein MMAR_5410 [Mycobacterium marinum M]
gi|183178706|gb|ACC43816.1| conserved hypothetical protein [Mycobacterium marinum M]
Length=306
Score = 289 bits (739), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 159/301 (53%), Positives = 202/301 (68%), Gaps = 8/301 (2%)
Query 1 MSKPRKQHGVVVGVDGSLESDAAACWGATDAAMRNIPLTVVHVVNADVAT---WPPMPYP 57
MS +VVGVDGS S A W A DA MRN+PL VVHV V W + P
Sbjct 1 MSTESTSPAIVVGVDGSPASTLAVEWAARDAEMRNVPLKVVHVFAPMVTPANGWADVAMP 60
Query 58 ETWGVWQEDEGRQIVANAVKLAKEAVGADRKLSVKSELVFSTPVPTMVEISNEAEMVVLG 117
+ W+ED+ QIV A +A +A R V SE+ ++ VP MVE+S +AEMVV+G
Sbjct 61 ADYARWREDQAHQIVQQAHAVAVDAAAPGRAAHVTSEVRYAAIVPAMVELSQQAEMVVVG 120
Query 118 SSGRGALARGLLGSVSSSLVRRAGCPVAVIHSDDAVIPDPQHAPVLVGIDGSPVSELATA 177
G+G +A LLGSVSS L A CPVA+IH D+A+ P APVLVG+DGSP SELAT
Sbjct 121 CRGQGGVASALLGSVSSGLAHHAHCPVAIIHDDEALPPRSAQAPVLVGVDGSPTSELATE 180
Query 178 VAFDEASRRGVELIAVHAWSDVEVVELPGLD-----FSAVQQEAELSLAERLAGWQERYP 232
+AFDEASRRG EL+A+HAW+D+ ++ P ++ +S ++ + E LAERL GWQERYP
Sbjct 181 IAFDEASRRGAELVALHAWTDMGPLDFPSINWAPIEWSNIKDQEEEVLAERLCGWQERYP 240
Query 233 DVPVSRVVVCDRPARKLVQKSASAQLVVVGSHGRGGLTGMLLGSVSNAVLHAARVPVIVA 292
DV +VVV DRPA +L++ + AQLVVVGSHGRGG GMLLGSVS AV+++AR+PVI+A
Sbjct 241 DVVTHKVVVSDRPAPRLLEHAHDAQLVVVGSHGRGGFPGMLLGSVSRAVINSARIPVIIA 300
Query 293 R 293
R
Sbjct 301 R 301
>gi|15609163|ref|NP_216542.1| hypothetical protein Rv2026c [Mycobacterium tuberculosis H37Rv]
gi|15841513|ref|NP_336550.1| universal stress protein [Mycobacterium tuberculosis CDC1551]
gi|31793208|ref|NP_855701.1| hypothetical protein Mb2051c [Mycobacterium bovis AF2122/97]
75 more sequence titles
Length=294
Score = 286 bits (732), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 153/295 (52%), Positives = 208/295 (71%), Gaps = 1/295 (0%)
Query 1 MSKPRKQHGVVVGVDGSLESDAAACWGATDAAMRNIPLTVVHVVNADVATWPPMPYPETW 60
MS ++G++VGVDGS +S+AA W A +A MR +P+T++H+V V WP
Sbjct 1 MSAATAKYGILVGVDGSAQSNAAVAWAAREAVMRQLPITLLHIVAPVVVGWPVGQLYANM 60
Query 61 GVWQEDEGRQIVANAVKLAKEAVGADRKLSVKSELVFSTPVPTMVEISNEAEMVVLGSSG 120
WQ+D +Q++ A + ++G + V +ELVFS VPT+++ S +A ++V+GS G
Sbjct 61 TEWQKDNAQQVIEQAREALTNSLGESKPPQVHTELVFSNVVPTLIDASQQAWLMVVGSQG 120
Query 121 RGALARGLLGSVSSSLVRRAGCPVAVIHSDDAVIPDPQHAPVLVGIDGSPVSELATAVAF 180
GAL R LLGS+S++L+ A CPVA+IHS + PD APVLVGIDGSP SE ATA+AF
Sbjct 121 MGALGRLLLGSISTALLHHARCPVAIIHSGNGATPDSD-APVLVGIDGSPASEAATALAF 179
Query 181 DEASRRGVELIAVHAWSDVEVVELPGLDFSAVQQEAELSLAERLAGWQERYPDVPVSRVV 240
DEASRR V+L+A+HAW+D+ + + G+D+ ++ LAERLAGWQE+YPDV V R +
Sbjct 180 DEASRRRVDLVALHAWTDLGMFPVLGMDWREREKREAEVLAERLAGWQEQYPDVRVHRSL 239
Query 241 VCDRPARKLVQKSASAQLVVVGSHGRGGLTGMLLGSVSNAVLHAARVPVIVARQS 295
VCD+PAR L++ S AQLVVVGSHGRGG +GMLLGSVS+AV H+ R+PVIV R S
Sbjct 240 VCDKPARWLLEHSEQAQLVVVGSHGRGGFSGMLLGSVSSAVAHSVRIPVIVVRPS 294
>gi|240170642|ref|ZP_04749301.1| hypothetical protein MkanA1_15110 [Mycobacterium kansasii ATCC
12478]
Length=297
Score = 286 bits (731), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 157/295 (54%), Positives = 199/295 (68%), Gaps = 0/295 (0%)
Query 1 MSKPRKQHGVVVGVDGSLESDAAACWGATDAAMRNIPLTVVHVVNADVATWPPMPYPETW 60
MS G+VVG+D S + A W A DA +RNIPLT+VH V+ +V++ MP P
Sbjct 1 MSSRNAPLGIVVGIDESPSARLAVQWAAHDAELRNIPLTLVHAVSPEVSSRLKMPMPAGL 60
Query 61 GVWQEDEGRQIVANAVKLAKEAVGADRKLSVKSELVFSTPVPTMVEISNEAEMVVLGSSG 120
WQ+D GR++V A+K+ EA V +E++ S VP +V++S +AEMVV G G
Sbjct 61 ARWQQDRGRRLVDEALKVVDEAAQGGGPAGVHTEILGSPAVPALVDLSKDAEMVVTGCLG 120
Query 121 RGALARGLLGSVSSSLVRRAGCPVAVIHSDDAVIPDPQHAPVLVGIDGSPVSELATAVAF 180
G LGSVSS+++R A CPV ++H +D APVLVGIDGS SELATA AF
Sbjct 121 SGRWPGRQLGSVSSAVLRYAHCPVVIVHDEDPSAAQRGQAPVLVGIDGSSASELATAFAF 180
Query 181 DEASRRGVELIAVHAWSDVEVVELPGLDFSAVQQEAELSLAERLAGWQERYPDVPVSRVV 240
DEA+RR V L+ +HAWSD++V E PG+D+ A Q AE LAERLAGWQE+YPDV V+R+V
Sbjct 181 DEAARRRVGLVGLHAWSDIDVSEWPGIDWPATQSMAEQVLAERLAGWQEQYPDVAVTRIV 240
Query 241 VCDRPARKLVQKSASAQLVVVGSHGRGGLTGMLLGSVSNAVLHAARVPVIVARQS 295
V D+PAR+LV KS AQLVVVGS GRGG GM +GSV AV A+VPVIVAR+S
Sbjct 241 VQDQPARQLVDKSGQAQLVVVGSRGRGGFAGMSVGSVGEAVAQLAQVPVIVARES 295
>gi|240170463|ref|ZP_04749122.1| hypothetical protein MkanA1_14215 [Mycobacterium kansasii ATCC
12478]
Length=294
Score = 286 bits (731), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 158/293 (54%), Positives = 207/293 (71%), Gaps = 1/293 (0%)
Query 1 MSKPRKQHGVVVGVDGSLESDAAACWGATDAAMRNIPLTVVHVVNADVATWPPMPYPETW 60
MS+ Q+G++VGVDGS +SDAA W A +A++ +P+T++H V V WP
Sbjct 1 MSRDTTQYGILVGVDGSAQSDAAVAWAAREASLHQMPVTLMHGVAPVVVGWPVGQLYTEM 60
Query 61 GVWQEDEGRQIVANAVKLAKEAVGADRKLSVKSELVFSTPVPTMVEISNEAEMVVLGSSG 120
WQ+DE + ++ A + E++G R V++E+V+S VP +++ S +A M V+GS G
Sbjct 61 PEWQKDEAQTVIERARRALDESLGESRLPDVRTEVVYSNIVPALIDASKDAWMTVVGSQG 120
Query 121 RGALARGLLGSVSSSLVRRAGCPVAVIHSDDAVIPDPQHAPVLVGIDGSPVSELATAVAF 180
GAL R LLGSVSS+L+ A PVAVIHSDD V PD APVLVGIDGSP SE ATA+AF
Sbjct 121 MGALGRALLGSVSSALLHHAHGPVAVIHSDDGVAPDTS-APVLVGIDGSPASEAATALAF 179
Query 181 DEASRRGVELIAVHAWSDVEVVELPGLDFSAVQQEAELSLAERLAGWQERYPDVPVSRVV 240
DEASRRGV+L+A+HAWSDV V + G+D+ + + E LAERLAGWQE+YPDV V R +
Sbjct 180 DEASRRGVDLVALHAWSDVGVFPILGMDWRDRESQGEEVLAERLAGWQEQYPDVRVQRSL 239
Query 241 VCDRPARKLVQKSASAQLVVVGSHGRGGLTGMLLGSVSNAVLHAARVPVIVAR 293
VCD+PA L++ + AQLVVVGS GRGG GMLLGSV +AV H+A++PVIV R
Sbjct 240 VCDKPAHWLLEGAQHAQLVVVGSRGRGGFPGMLLGSVGSAVAHSAKIPVIVVR 292
>gi|118620046|ref|YP_908378.1| hypothetical protein MUL_5033 [Mycobacterium ulcerans Agy99]
gi|118572156|gb|ABL06907.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99]
Length=306
Score = 285 bits (730), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 158/301 (53%), Positives = 201/301 (67%), Gaps = 8/301 (2%)
Query 1 MSKPRKQHGVVVGVDGSLESDAAACWGATDAAMRNIPLTVVHVVNADVAT---WPPMPYP 57
MS +VVGVDGS S A W A DA MRN+PL VVHV VA W + P
Sbjct 1 MSTESTSPAIVVGVDGSPASTLAVDWAARDAEMRNVPLKVVHVFAPMVAPANGWADVAMP 60
Query 58 ETWGVWQEDEGRQIVANAVKLAKEAVGADRKLSVKSELVFSTPVPTMVEISNEAEMVVLG 117
+ W+ED+ QIV A +A +A R V SE+ ++ VP MVE+S +AEMVV+G
Sbjct 61 ADYARWREDQAHQIVQQAHAVAVDAAAPGRAAHVTSEVRYAAIVPAMVELSLQAEMVVVG 120
Query 118 SSGRGALARGLLGSVSSSLVRRAGCPVAVIHSDDAVIPDPQHAPVLVGIDGSPVSELATA 177
G+G +A LLGSVSS L A CPVA+IH D+ + P APVLVG+DGSP SELAT
Sbjct 121 CRGQGGVASALLGSVSSGLAHHAHCPVAIIHDDEPLPPRSAQAPVLVGVDGSPTSELATE 180
Query 178 VAFDEASRRGVELIAVHAWSDVEVVELPGLD-----FSAVQQEAELSLAERLAGWQERYP 232
+ FDEASRRG EL+A+HAW+D+ ++ P ++ +S ++ + E LAERL GWQERYP
Sbjct 181 IGFDEASRRGAELVALHAWTDMGPLDFPSINWAPIEWSNIKDQEEEVLAERLCGWQERYP 240
Query 233 DVPVSRVVVCDRPARKLVQKSASAQLVVVGSHGRGGLTGMLLGSVSNAVLHAARVPVIVA 292
DV +VVV DRPA +L++ + AQLVVVGSHGRGG GMLLGSVS AV+++AR+PVI+A
Sbjct 241 DVVTHKVVVSDRPAPRLLEHAHDAQLVVVGSHGRGGFPGMLLGSVSRAVVNSARIPVIIA 300
Query 293 R 293
R
Sbjct 301 R 301
>gi|145224961|ref|YP_001135639.1| UspA domain-containing protein [Mycobacterium gilvum PYR-GCK]
gi|315445292|ref|YP_004078171.1| universal stress protein UspA-like protein [Mycobacterium sp.
Spyr1]
gi|145217447|gb|ABP46851.1| UspA domain protein [Mycobacterium gilvum PYR-GCK]
gi|315263595|gb|ADU00337.1| universal stress protein UspA-like protein [Mycobacterium sp.
Spyr1]
Length=295
Score = 278 bits (712), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 151/286 (53%), Positives = 205/286 (72%), Gaps = 2/286 (0%)
Query 9 GVVVGVDGSLESDAAACWGATDAAMRNIPLTVVHVV-NADVATWPPMPYPETWGVWQEDE 67
G+VVGVDGS S A W A DAA+R +PLT+ +V+ A V +W +P P ++ ++ E
Sbjct 9 GIVVGVDGSAASRVAVDWAARDAALRQVPLTLAYVLPGAAVQSWIQVPLPASFYEDEKAE 68
Query 68 GRQIVANAVKLAKEAVGADRKLSVKSELVFSTPVPTMVEISNEAEMVVLGSSGRGALARG 127
+++A+A + A A +V +++ PVPT+ ++S +A+M+V+GS G G R
Sbjct 69 ATRVLADARAVVDAATQAHPLPAVTEKVLSGQPVPTLADLSRDADMIVVGSRGMGKWERR 128
Query 128 LLGSVSSSLVRRAGCPVAVIHSDDAVIPDPQHAPVLVGIDGSPVSELATAVAFDEASRRG 187
+LGSVSS LV A CPVAVI+ +D +IP P APV+VGIDGSP SE ATA+AFDEA RRG
Sbjct 129 VLGSVSSGLVHHARCPVAVIYDEDPLIPHPAQAPVVVGIDGSPASERATAIAFDEACRRG 188
Query 188 VELIAVHAWSDVEVVELPGLDFSAVQQEAELSLAERLAGWQERYPDVPVSRVVVCDRPAR 247
V+L+AVH WSD ELPG++++ VQ E E+ L+ERLAGW ERYPDV V RVV D+PAR
Sbjct 189 VDLVAVHTWSDAG-YELPGVEWTEVQPEEEMLLSERLAGWHERYPDVTVHRVVRRDQPAR 247
Query 248 KLVQKSASAQLVVVGSHGRGGLTGMLLGSVSNAVLHAARVPVIVAR 293
+L++++ AQL+VVGSHGRGG TGMLLGSV + ++ ++R PVIVAR
Sbjct 248 RLLEEAEKAQLLVVGSHGRGGFTGMLLGSVGSQIVQSSRTPVIVAR 293
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/144 (32%), Positives = 70/144 (49%), Gaps = 16/144 (11%)
Query 7 QHGVVVGVDGSLESDAAACWGATDAAMRNIPLTVVHVVNADVATWPPMPYPETWGV-WQE 65
Q VVVG+DGS S+ A +A R + L VH TW Y E GV W E
Sbjct 160 QAPVVVGIDGSPASERATAIAFDEACRRGVDLVAVH-------TWSDAGY-ELPGVEWTE 211
Query 66 DEGRQIVANAVKLAKEAVGADRK---LSVKSELVFSTPVPTMVEISNEAEMVVLGSSGRG 122
+ + + + +LA G + ++V + P ++E + +A+++V+GS GRG
Sbjct 212 VQPEEEMLLSERLA----GWHERYPDVTVHRVVRRDQPARRLLEEAEKAQLLVVGSHGRG 267
Query 123 ALARGLLGSVSSSLVRRAGCPVAV 146
LLGSV S +V+ + PV V
Sbjct 268 GFTGMLLGSVGSQIVQSSRTPVIV 291
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/147 (33%), Positives = 69/147 (47%), Gaps = 16/147 (10%)
Query 158 QHAP--VLVGIDGSPVSELATAVAFDEASRRGVELI--------AVHAWSDVEVVELPGL 207
Q AP ++VG+DGS S +A A +A+ R V L AV +W V LP
Sbjct 4 QPAPLGIVVGVDGSAASRVAVDWAARDAALRQVPLTLAYVLPGAAVQSWIQ---VPLPAS 60
Query 208 DFSAVQQEAELSL---AERLAGWQERYPDVPVSRVVVCDRPARKLVQKSASAQLVVVGSH 264
+ + EA L + + +P V+ V+ +P L S A ++VVGS
Sbjct 61 FYEDEKAEATRVLADARAVVDAATQAHPLPAVTEKVLSGQPVPTLADLSRDADMIVVGSR 120
Query 265 GRGGLTGMLLGSVSNAVLHAARVPVIV 291
G G +LGSVS+ ++H AR PV V
Sbjct 121 GMGKWERRVLGSVSSGLVHHARCPVAV 147
>gi|240172801|ref|ZP_04751460.1| hypothetical protein MkanA1_26047 [Mycobacterium kansasii ATCC
12478]
Length=304
Score = 275 bits (702), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 162/306 (53%), Positives = 208/306 (68%), Gaps = 17/306 (5%)
Query 1 MSKPRKQHGVVVGVDGSLESDAAACWGATDAAMRNIPLTVVHVV-----NADVATWPPMP 55
MS G+VVGVDGS S+AAA W +A MRN+ +T+VH + + W P
Sbjct 1 MSSEITDPGIVVGVDGSTFSNAAARWAVREATMRNLAVTLVHAAAPVPGGSPLLEWSGDP 60
Query 56 YPETWGVWQEDEGRQIVANAVKLAKEAVGADRKLSVKSELVFSTPVPTMVEISNEAEMVV 115
P+ + R+++A+ +KL + G DR+ + SEL PVP +V++S +A+MVV
Sbjct 61 IPDELMQQLDGSARRVLADTIKLVENITG-DRRPRINSELTSLAPVPALVDLSTKADMVV 119
Query 116 LGSSGRGALARGLLGSVSSSLVRRAGCPVAVIHSDDAVIPDPQHAPVLVGIDGSPVSELA 175
+GS G+G + R LLGSVS+ LV A CPVAVIH+D IP P+ PVLVGIDGSP SE A
Sbjct 120 VGSRGQGTVKRMLLGSVSTGLVHHAHCPVAVIHND---IPAPREGPVLVGIDGSPASERA 176
Query 176 TAVAFDEASRRGVELIAVHAWSDVEVVELPGLDF--------SAVQQEAELSLAERLAGW 227
TA+AF+EAS RG EL+A+HAW+D EV P ++ S +Q EA+ +LAERLAGW
Sbjct 177 TAIAFEEASWRGAELVALHAWTDAEVPGTPSREWTGLTRTSWSTLQSEADETLAERLAGW 236
Query 228 QERYPDVPVSRVVVCDRPARKLVQKSASAQLVVVGSHGRGGLTGMLLGSVSNAVLHAARV 287
++RYPDV V RVVV +RPA+ LV++S SAQLVVVGSHGRGG GMLLGSVS AV+HA R
Sbjct 237 RDRYPDVDVERVVVVNRPAQHLVERSESAQLVVVGSHGRGGFAGMLLGSVSTAVVHAVRT 296
Query 288 PVIVAR 293
PVIVAR
Sbjct 297 PVIVAR 302
>gi|108798069|ref|YP_638266.1| hypothetical protein Mmcs_1097 [Mycobacterium sp. MCS]
gi|119867165|ref|YP_937117.1| UspA domain-containing protein [Mycobacterium sp. KMS]
gi|108768488|gb|ABG07210.1| UspA [Mycobacterium sp. MCS]
gi|119693254|gb|ABL90327.1| UspA domain protein [Mycobacterium sp. KMS]
Length=294
Score = 274 bits (701), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 153/294 (53%), Positives = 196/294 (67%), Gaps = 1/294 (0%)
Query 1 MSKPRKQHGVVVGVDGSLESDAAACWGATDAAMRNIPLTVVHVVNADVATWPPMPYPETW 60
MS ++G+VVGVDGS ES A W AT+A P+T+++VV +WP + E
Sbjct 1 MSGSTPRYGIVVGVDGSPESQVALRWAATEAQTSGRPVTLINVVTPIAISWPTIMLQEQI 60
Query 61 GVWQEDEGRQIVANAVKLAKEAVGADRKLSVKSELVFSTPVPTMVEISNEAEMVVLGSSG 120
+++ +++ +A + + +G + +V SE++ + V +VE S +A MVV+G+ G
Sbjct 61 SAYEKQNAEEVLGHARQTLLDGLGPGPQPAVHSEVLMAGIVEALVEASKDAHMVVVGARG 120
Query 121 RGALARGLLGSVSSSLVRRAGCPVAVIHSDDAVIPDPQHAPVLVGIDGSPVSELATAVAF 180
RGA+ R LLGSVS+ L+ A CPVAVIHS D +P APV+VGIDGSP SE ATA+AF
Sbjct 121 RGAVRRVLLGSVSAGLIHHAHCPVAVIHSRDGRLPTAD-APVVVGIDGSPASEAATALAF 179
Query 181 DEASRRGVELIAVHAWSDVEVVELPGLDFSAVQQEAELSLAERLAGWQERYPDVPVSRVV 240
DEASRRG EL+AVH WSD+ + D +Q AE +LAERLAGWQERYPDV RVV
Sbjct 180 DEASRRGAELVAVHVWSDMAPIPGAATDRHQCEQRAEETLAERLAGWQERYPDVRTRRVV 239
Query 241 VCDRPARKLVQKSASAQLVVVGSHGRGGLTGMLLGSVSNAVLHAARVPVIVARQ 294
DRPAR LV+ SA AQLVV+GSHGRGG GMLLGSVS AV + VPVIV RQ
Sbjct 240 ESDRPARWLVEHSADAQLVVLGSHGRGGFAGMLLGSVSAAVAQSVDVPVIVVRQ 293
>gi|296169097|ref|ZP_06850756.1| universal stress protein family protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295896217|gb|EFG75879.1| universal stress protein family protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=292
Score = 272 bits (696), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 152/293 (52%), Positives = 197/293 (68%), Gaps = 1/293 (0%)
Query 1 MSKPRKQHGVVVGVDGSLESDAAACWGATDAAMRNIPLTVVHVVNADVATWPPMPYPETW 60
M+ K++GV+V VDGS SDAA WG +A MR++P+T++H V V WP
Sbjct 1 MAGSAKKYGVLVCVDGSAASDAAVAWGTREAIMRDLPITLMHAVPPVVVGWPVGQLYADM 60
Query 61 GVWQEDEGRQIVANAVKLAKEAVGADRKLSVKSELVFSTPVPTMVEISNEAEMVVLGSSG 120
WQ D R ++ A K ++G + +E V+S VP ++E S++A ++V GS G
Sbjct 61 PEWQRDSARHVIDQARKALNASLGDAKPPETHTETVYSAIVPALIEASDDAWVLVTGSQG 120
Query 121 RGALARGLLGSVSSSLVRRAGCPVAVIHSDDAVIPDPQHAPVLVGIDGSPVSELATAVAF 180
GA+ R LLGSV++ LV A CPVAVIHSD PDP PV++GIDGSP SE ATA+AF
Sbjct 121 LGAMGRLLLGSVTAGLVHYAHCPVAVIHSDGGAAPDPG-GPVVLGIDGSPASEAATALAF 179
Query 181 DEASRRGVELIAVHAWSDVEVVELPGLDFSAVQQEAELSLAERLAGWQERYPDVPVSRVV 240
DEASRR V L+AVH WSDV V + G+D+ ++EA+ L ERLAGWQERYPDV V R +
Sbjct 180 DEASRRRVGLVAVHVWSDVGVFPILGMDWHDREKEAQEVLGERLAGWQERYPDVHVERKL 239
Query 241 VCDRPARKLVQKSASAQLVVVGSHGRGGLTGMLLGSVSNAVLHAARVPVIVAR 293
CD+P+ L+++S AQLVVVGS GRGG GMLLGSVS+AV +ARVPV+V R
Sbjct 240 FCDKPSDWLLKESERAQLVVVGSRGRGGFPGMLLGSVSSAVAQSARVPVLVVR 292
>gi|126433730|ref|YP_001069421.1| UspA domain-containing protein [Mycobacterium sp. JLS]
gi|126233530|gb|ABN96930.1| UspA domain protein [Mycobacterium sp. JLS]
Length=294
Score = 270 bits (691), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 151/293 (52%), Positives = 195/293 (67%), Gaps = 1/293 (0%)
Query 1 MSKPRKQHGVVVGVDGSLESDAAACWGATDAAMRNIPLTVVHVVNADVATWPPMPYPETW 60
MS ++G+VVGVDGS ES A W AT+A P+T+++VV +WP + E
Sbjct 1 MSGSTPRYGIVVGVDGSPESQVALRWAATEAQTSGRPVTLINVVTPIAISWPTIMLQEQI 60
Query 61 GVWQEDEGRQIVANAVKLAKEAVGADRKLSVKSELVFSTPVPTMVEISNEAEMVVLGSSG 120
+++ +++ +A + + +G + +V SE++ + V +VE S +A MVV+G+ G
Sbjct 61 STYEKQNAEEVLGHARQTLLDGLGPGPQPAVHSEVLMAGIVEALVEASKDAHMVVVGARG 120
Query 121 RGALARGLLGSVSSSLVRRAGCPVAVIHSDDAVIPDPQHAPVLVGIDGSPVSELATAVAF 180
RGA+ R LLGSVS+ L+ A CPVAVIHS D +P APV+VGIDGSP SE ATA+AF
Sbjct 121 RGAVRRVLLGSVSAGLIHHAHCPVAVIHSRDGRLPTAD-APVVVGIDGSPASEAATALAF 179
Query 181 DEASRRGVELIAVHAWSDVEVVELPGLDFSAVQQEAELSLAERLAGWQERYPDVPVSRVV 240
+EASRRG EL+AVH WSD+ + D +Q AE +LAERLAGWQERYPDV RVV
Sbjct 180 EEASRRGAELVAVHVWSDMAPIPGAATDRHQCEQRAEETLAERLAGWQERYPDVRTRRVV 239
Query 241 VCDRPARKLVQKSASAQLVVVGSHGRGGLTGMLLGSVSNAVLHAARVPVIVAR 293
DRPAR LV+ SA AQLVV+GSHGRGG GMLLGSVS AV + VPVIV R
Sbjct 240 ESDRPARWLVEHSADAQLVVLGSHGRGGFAGMLLGSVSAAVAQSVDVPVIVVR 292
>gi|118469207|ref|YP_888229.1| universal stress protein family protein [Mycobacterium smegmatis
str. MC2 155]
gi|118170494|gb|ABK71390.1| universal stress protein family protein [Mycobacterium smegmatis
str. MC2 155]
Length=293
Score = 270 bits (690), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 151/288 (53%), Positives = 189/288 (66%), Gaps = 6/288 (2%)
Query 8 HGVVVGVDGSLESDAAACWGATDAAMRNIPLTVVHVVNADVATWPPMPYPETWGVWQEDE 67
+G+VV VDGS ESDAA W A +A +R IP+TV+HVV + WP P + WQE
Sbjct 10 YGMVVAVDGSAESDAAVRWAAREATLRKIPVTVMHVVEPMIVNWPVPPVQGSVTEWQEAN 69
Query 68 GRQIVANA--VKLAKEAVGADRKLSVKSELVFSTPVPTMVEISNEAEMVVLGSSGRGALA 125
R ++ +A +A E D ++ E+ ++ V +V++S A M+V+GS G GA
Sbjct 70 ARNVIKHAHDTFVAVEESAPD---GIRHEIRYAGIVAELVDVSKNATMMVVGSRGLGAFG 126
Query 126 RGLLGSVSSSLVRRAGCPVAVIHSDDAVIPDPQHAPVLVGIDGSPVSELATAVAFDEASR 185
LLGSVSS ++ A CPVAVIH D PDP+ +PVLVGIDGSP SE ATA AFDEASR
Sbjct 127 GALLGSVSSGVIHHAHCPVAVIHGDQIRRPDPR-SPVLVGIDGSPASEDATAFAFDEASR 185
Query 186 RGVELIAVHAWSDVEVVELPGLDFSAVQQEAELSLAERLAGWQERYPDVPVSRVVVCDRP 245
R V+LIA+HAWSDV V G+D+ + + L ERLAGW+ERYPDV V+R +VCD+P
Sbjct 186 RRVDLIALHAWSDVGVFSALGMDWHEYEDQGRELLGERLAGWRERYPDVRVTRQIVCDQP 245
Query 246 ARKLVQKSASAQLVVVGSHGRGGLTGMLLGSVSNAVLHAARVPVIVAR 293
AR L+ S AQLVVVGSHGR G GMLLGSV + V AA PVIV R
Sbjct 246 ARWLIDGSRHAQLVVVGSHGRAGFAGMLLGSVGSKVARAAYSPVIVVR 293
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/147 (30%), Positives = 76/147 (52%), Gaps = 7/147 (4%)
Query 1 MSKPRKQHGVVVGVDGSLESDAAACWGATDAAMRNIPLTVVHVVNADVATWPPMPYPETW 60
+ +P + V+VG+DGS S+ A + +A+ R + L +H + DV + + W
Sbjct 153 IRRPDPRSPVLVGIDGSPASEDATAFAFDEASRRRVDLIALHAWS-DVGVFSALGM--DW 209
Query 61 GVWQEDEGRQIVANAVKLAKEAVGADRKLSVKSELVFSTPVPTMVEISNEAEMVVLGSSG 120
+ ED+GR+++ + +E + V ++V P +++ S A++VV+GS G
Sbjct 210 HEY-EDQGRELLGERLAGWRERY---PDVRVTRQIVCDQPARWLIDGSRHAQLVVVGSHG 265
Query 121 RGALARGLLGSVSSSLVRRAGCPVAVI 147
R A LLGSV S + R A PV V+
Sbjct 266 RAGFAGMLLGSVGSKVARAAYSPVIVV 292
>gi|118617761|ref|YP_906093.1| hypothetical protein MUL_2236 [Mycobacterium ulcerans Agy99]
gi|118569871|gb|ABL04622.1| conserved hypothetical transmembrane protein [Mycobacterium ulcerans
Agy99]
Length=294
Score = 263 bits (673), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 150/293 (52%), Positives = 200/293 (69%), Gaps = 1/293 (0%)
Query 1 MSKPRKQHGVVVGVDGSLESDAAACWGATDAAMRNIPLTVVHVVNADVATWPPMPYPETW 60
MS K++G++V VDGS +SDAA W A +A + P+T++H V V WP
Sbjct 1 MSSGAKKYGILVAVDGSAQSDAAVPWAAREAGLHRTPITLMHGVAPVVVGWPVGQLYAEM 60
Query 61 GVWQEDEGRQIVANAVKLAKEAVGADRKLSVKSELVFSTPVPTMVEISNEAEMVVLGSSG 120
WQ DE ++ A K+ EA+G V++E+V+S V ++E S +A MVV+GS G
Sbjct 61 PDWQRDEANSVMERARKVLSEALGDSESPDVRTEVVYSNVVAALIEASTQASMVVVGSQG 120
Query 121 RGALARGLLGSVSSSLVRRAGCPVAVIHSDDAVIPDPQHAPVLVGIDGSPVSELATAVAF 180
GAL R LLGSV S+L+ A CPVAV+HSD PDP A V+VGIDGSP +E ATA+AF
Sbjct 121 MGALGRMLLGSVCSALLHHAHCPVAVVHSDSGAAPDPG-AAVVVGIDGSPAAEAATAMAF 179
Query 181 DEASRRGVELIAVHAWSDVEVVELPGLDFSAVQQEAELSLAERLAGWQERYPDVPVSRVV 240
+EASRRGV+L+A+HAWSDV V + G+D+ + + E LAERLA WQ++YPDV V R +
Sbjct 180 EEASRRGVDLVALHAWSDVGVFPILGMDWRERESQGEEILAERLASWQQQYPDVHVKRSL 239
Query 241 VCDRPARKLVQKSASAQLVVVGSHGRGGLTGMLLGSVSNAVLHAARVPVIVAR 293
VCD+PA L++++ AQLV+VG+ GRGG GMLLGSVS+ V H+A+VPVIV R
Sbjct 240 VCDKPAHWLLEEAQHAQLVIVGNRGRGGFPGMLLGSVSSTVAHSAKVPVIVVR 292
>gi|333990935|ref|YP_004523549.1| hypothetical protein JDM601_2295 [Mycobacterium sp. JDM601]
gi|333486903|gb|AEF36295.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=284
Score = 259 bits (662), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 148/283 (53%), Positives = 189/283 (67%), Gaps = 5/283 (1%)
Query 11 VVGVDGSLESDAAACWGATDAAMRNIPLTVVHVVNADVATWPPMPYPETWGVWQEDEGRQ 70
+VGVDGS ESDAA W +AAMRN+PLT++HVV WPP P + WQ D R
Sbjct 1 MVGVDGSAESDAAVAWATHEAAMRNLPLTLLHVVTPLETGWPPDPRSDGMPSWQADAARG 60
Query 71 IVANAVKLAKEAVGADRKLSVKSELVFSTPVPTMVEISNEAEMVVLGSSGRGALARGLLG 130
++ A + + A + V +E+ +S + T++ + + M V+GS+G GA+ R LLG
Sbjct 61 VLERARSVVESRGSAAPR--VHTEIAYSQVIATLIGATKGSWMTVVGSTGLGAIGRLLLG 118
Query 131 SVSSSLVRRAGCPVAVIHSDDAVIPDPQHAPVLVGIDGSPVSELATAVAFDEASRRGVEL 190
SVS+SL+ PVAVI +D AV D APV+VGIDGSP SE A A+AFDEASRRGV L
Sbjct 119 SVSTSLIHHGHGPVAVIRTDRAVAED---APVVVGIDGSPASETAAALAFDEASRRGVPL 175
Query 191 IAVHAWSDVEVVELPGLDFSAVQQEAELSLAERLAGWQERYPDVPVSRVVVCDRPARKLV 250
+A+HAWSDV V+ L +D S +++A LAERLAG+QE+YPDV V R VV D+PAR L+
Sbjct 176 VALHAWSDVGVMPLLNIDRSDYEEQAHEILAERLAGYQEQYPDVTVHRKVVSDQPARWLI 235
Query 251 QKSASAQLVVVGSHGRGGLTGMLLGSVSNAVLHAARVPVIVAR 293
+ AQLVVVGS GRGG LLGSVS+AV AA +PVIV R
Sbjct 236 HAAEQAQLVVVGSRGRGGFASQLLGSVSSAVAQAAGIPVIVVR 278
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/138 (34%), Positives = 76/138 (56%), Gaps = 7/138 (5%)
Query 10 VVVGVDGSLESDAAACWGATDAAMRNIPLTVVHVVNADVATWPPMPYPETWGVWQEDEGR 69
VVVG+DGS S+ AA +A+ R +PL +H + DV P + + E++
Sbjct 147 VVVGIDGSPASETAAALAFDEASRRGVPLVALHAWS-DVGVMPLLNIDRS---DYEEQAH 202
Query 70 QIVANAVKLAKEAVGADRKLSVKSELVFSTPVPTMVEISNEAEMVVLGSSGRGALARGLL 129
+I+A + +E ++V ++V P ++ + +A++VV+GS GRG A LL
Sbjct 203 EILAERLAGYQEQY---PDVTVHRKVVSDQPARWLIHAAEQAQLVVVGSRGRGGFASQLL 259
Query 130 GSVSSSLVRRAGCPVAVI 147
GSVSS++ + AG PV V+
Sbjct 260 GSVSSAVAQAAGIPVIVV 277
>gi|296169051|ref|ZP_06850712.1| universal stress protein [Mycobacterium parascrofulaceum ATCC
BAA-614]
gi|295896279|gb|EFG75939.1| universal stress protein [Mycobacterium parascrofulaceum ATCC
BAA-614]
Length=295
Score = 259 bits (662), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 158/298 (54%), Positives = 201/298 (68%), Gaps = 6/298 (2%)
Query 1 MSKPRKQHGVVVGVDGSLESDAAACWGATDAAMRNIPLTVVHVVNA---DVATWPPMPYP 57
MS+ G++VGVD S S AA W A DAA+RN+PLT++HV+ VA WP +P P
Sbjct 1 MSERETHRGIMVGVDRSASSMAAVAWAARDAAIRNVPLTLMHVIAPVVPAVAPWPAIPIP 60
Query 58 ETWGVWQEDEGRQIVANAVKLAKEAVGADRKLSVKSELVFSTPVPTMVEISNEAEMVVLG 117
+ + Q+++ RQI+ +A ++ ++ V S +V V T+V S A+M+V+G
Sbjct 61 QDYFERQDEKARQILEDARQVVADSTADHGPPFVYSVVVRGPTVSTLVNESKIADMMVVG 120
Query 118 SSGRGALARGLLGSVSSSLVRRAGCPVAVIHSDDAVIPDPQHAPVLVGIDGSPVSELATA 177
G GA +R GS S+ LV A CPVAV+H D P PQ APVLVGIDGS S+
Sbjct 121 YRGEGAFSRVPFGSASTGLVNYAHCPVAVVH--DEAPPRPQ-APVLVGIDGSAASKRVAE 177
Query 178 VAFDEASRRGVELIAVHAWSDVEVVELPGLDFSAVQQEAELSLAERLAGWQERYPDVPVS 237
+AF+EASRRGVEL+A+HAWSDV V E+PGLD ++ A SLAE LAG QERYPDV V
Sbjct 178 IAFEEASRRGVELVALHAWSDVSVSEVPGLDLEMMEVRARESLAEWLAGLQERYPDVGVR 237
Query 238 RVVVCDRPARKLVQKSASAQLVVVGSHGRGGLTGMLLGSVSNAVLHAARVPVIVARQS 295
VVVCD+PAR+L++ S SAQLVVVGSHGRGG GMLLGSVS AV HAA+ VIV+R+S
Sbjct 238 PVVVCDQPARQLIEHSESAQLVVVGSHGRGGFAGMLLGSVSTAVAHAAQSVVIVSRES 295
>gi|120402389|ref|YP_952218.1| UspA domain-containing protein [Mycobacterium vanbaalenii PYR-1]
gi|119955207|gb|ABM12212.1| UspA domain protein [Mycobacterium vanbaalenii PYR-1]
Length=297
Score = 257 bits (657), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 147/297 (50%), Positives = 196/297 (66%), Gaps = 14/297 (4%)
Query 6 KQHGVVVGVDGSLESDAAACWGATDAAMRNIPLTVVHVVNAD-VATWPPMPYPETWGVWQ 64
K HG+V VDGS S AA W A +A++R++P+TVVHV D + W +P V +
Sbjct 8 KPHGIVAAVDGSATSQLAAVWAAREASLRDVPVTVVHVQPTDEFSPWLDVPITAESTVAR 67
Query 65 EDEGRQIVANAVKLAKEAVGADRKLSVKSELVFSTPVPTMVEISNEAEMVVLGSSGRGAL 124
+ +IVA AV A+ R++ V+ L+ +P ++++S +A+M+V+G G GA+
Sbjct 68 DRRAAEIVAEAVHAVTGALQGRREVPVRELLLADPLMPALIDVSKDADMIVVGCRGLGAV 127
Query 125 ARGLLGSVSSSLVRRAGCPVAVIHSDDAVIPDPQHAPVLVGIDGSPVSELATAVAFDEAS 184
R LLGS +S+LV A CPV VIH +D V+ APV+VG+D SP SELA A+AFDEAS
Sbjct 128 GRLLLGSTTSALVHHARCPVVVIHDEDRVVSREASAPVVVGVDASPASELAVAIAFDEAS 187
Query 185 RRGVELIAVHAWSDVEVVELPGLDF------SAVQQEAELSLAERLAGWQERYPDVPVSR 238
RRGVEL+AVH W++ DF A+ ++A+ LA+RLAG+ E+YPDV V R
Sbjct 188 RRGVELVAVHTWTN-------SADFYVDVAVEALAEQADEELAQRLAGFGEQYPDVVVRR 240
Query 239 VVVCDRPARKLVQKSASAQLVVVGSHGRGGLTGMLLGSVSNAVLHAARVPVIVARQS 295
VV D PA +LV++S AQL+VVGSHGRGG G+LLGSVS AV AARVPVIVARQS
Sbjct 241 VVGQDNPAHRLVEESHRAQLLVVGSHGRGGFAGLLLGSVSWAVAQAARVPVIVARQS 297
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/146 (31%), Positives = 69/146 (48%), Gaps = 8/146 (5%)
Query 154 IPDPQHAPVLVGIDGSPVSELATAVAFDEASRRGVELIAVHA--------WSDVEVVELP 205
+P P+ ++ +DGS S+LA A EAS R V + VH W DV +
Sbjct 4 LPSPKPHGIVAAVDGSATSQLAAVWAAREASLRDVPVTVVHVQPTDEFSPWLDVPITAES 63
Query 206 GLDFSAVQQEAELSLAERLAGWQERYPDVPVSRVVVCDRPARKLVQKSASAQLVVVGSHG 265
+ E + G + +VPV +++ D L+ S A ++VVG G
Sbjct 64 TVARDRRAAEIVAEAVHAVTGALQGRREVPVRELLLADPLMPALIDVSKDADMIVVGCRG 123
Query 266 RGGLTGMLLGSVSNAVLHAARVPVIV 291
G + +LLGS ++A++H AR PV+V
Sbjct 124 LGAVGRLLLGSTTSALVHHARCPVVV 149
>gi|120402959|ref|YP_952788.1| UspA domain-containing protein [Mycobacterium vanbaalenii PYR-1]
gi|119955777|gb|ABM12782.1| UspA domain protein [Mycobacterium vanbaalenii PYR-1]
Length=294
Score = 256 bits (655), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 154/287 (54%), Positives = 199/287 (70%), Gaps = 2/287 (0%)
Query 9 GVVVGVDGSLESDAAACWGATDAAMRNIPLTVVHVV-NADVATWPPMPYPETWGVWQEDE 67
G+VV VDGS S A W A DAAMR IPLT+ HV+ +A +W +P P + ++ E
Sbjct 9 GIVVAVDGSDASRVAVDWAARDAAMRRIPLTLAHVLPSAATQSWIQVPLPAAFFEDEKLE 68
Query 68 GRQIVANAVKLAKEAVGADRKLSVKSELVFSTPVPTMVEISNEAEMVVLGSSGRGALARG 127
+I+A+A L A L+V ++ PV +V+++ +AEM+V+GS G G R
Sbjct 69 AERILADARALVTAATEGGEALTVDEVVLSGQPVAALVDLAKDAEMLVMGSRGLGKWERR 128
Query 128 LLGSVSSSLVRRAGCPVAVIHSDDAVIPDPQHAPVLVGIDGSPVSELATAVAFDEASRRG 187
LLGSVSS +V A CPVAVIH D +IP P APV+VG+DGSP SE ATA+AFDEAS RG
Sbjct 129 LLGSVSSGVVHHAHCPVAVIHDVDPLIPHPAQAPVVVGVDGSPASEHATAIAFDEASFRG 188
Query 188 VELIAVHAWSDVEVVELPGLDFSAVQQEAELSLAERLAGWQERYPDVPVSRVVVCDRPAR 247
V+L+AVH WSD ELPG ++ +Q E ++ LAERLAGWQERYPDV V RVV D+PAR
Sbjct 189 VDLVAVHTWSDAG-YELPGTGWAEIQPEEDMLLAERLAGWQERYPDVTVHRVVCRDQPAR 247
Query 248 KLVQKSASAQLVVVGSHGRGGLTGMLLGSVSNAVLHAARVPVIVARQ 294
+L++++A QL+VVGSHGRGG GMLLGSV + V+ +AR PVIVAR+
Sbjct 248 RLLEEAAKGQLLVVGSHGRGGFGGMLLGSVGSQVVQSARGPVIVARR 294
Score = 36.2 bits (82), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 45/143 (32%), Positives = 67/143 (47%), Gaps = 14/143 (9%)
Query 7 QHGVVVGVDGSLESDAAACWGATDAAMRNIPLTVVHVVNADVATWPPMPYPETWGVWQED 66
Q VVVGVDGS S+ A +A+ R + L VH TW Y W E
Sbjct 160 QAPVVVGVDGSPASEHATAIAFDEASFRGVDLVAVH-------TWSDAGYELPGTGWAEI 212
Query 67 EGRQIVANAVKLAKEAVGADRK---LSVKSELVFSTPVPTMVEISNEAEMVVLGSSGRGA 123
+ + + A +LA G + ++V + P ++E + + +++V+GS GRG
Sbjct 213 QPEEDMLLAERLA----GWQERYPDVTVHRVVCRDQPARRLLEEAAKGQLLVVGSHGRGG 268
Query 124 LARGLLGSVSSSLVRRAGCPVAV 146
LLGSV S +V+ A PV V
Sbjct 269 FGGMLLGSVGSQVVQSARGPVIV 291
>gi|183982997|ref|YP_001851288.1| hypothetical protein MMAR_2995 [Mycobacterium marinum M]
gi|183176323|gb|ACC41433.1| conserved hypothetical transmembrane protein [Mycobacterium marinum
M]
Length=294
Score = 255 bits (651), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 152/293 (52%), Positives = 201/293 (69%), Gaps = 1/293 (0%)
Query 1 MSKPRKQHGVVVGVDGSLESDAAACWGATDAAMRNIPLTVVHVVNADVATWPPMPYPETW 60
MS K++G++V VDGS +SDAA W A +A + P+T++H V V WP
Sbjct 1 MSSGAKKYGILVAVDGSAQSDAAVAWAAREAGLHRTPITLMHGVAPVVVGWPVGQLYAEM 60
Query 61 GVWQEDEGRQIVANAVKLAKEAVGADRKLSVKSELVFSTPVPTMVEISNEAEMVVLGSSG 120
WQ DE ++ A K+ EA+G V++E+V+S V ++E S +A MVV+GS G
Sbjct 61 PDWQRDEANSVMERARKVLSEALGDSESPDVRTEVVYSNVVAALIEASTQASMVVVGSQG 120
Query 121 RGALARGLLGSVSSSLVRRAGCPVAVIHSDDAVIPDPQHAPVLVGIDGSPVSELATAVAF 180
GAL R LLGSV S+L+ A CPVAV+HSD PDP A V+VGIDGSP +E ATA+AF
Sbjct 121 MGALGRMLLGSVCSALLHHAHCPVAVVHSDSGAAPDPG-AAVVVGIDGSPAAEAATAMAF 179
Query 181 DEASRRGVELIAVHAWSDVEVVELPGLDFSAVQQEAELSLAERLAGWQERYPDVPVSRVV 240
+EASRRGV+L+A+HAWSDV V + G+D+ + + E LAERLAGWQE+YPDV V R +
Sbjct 180 EEASRRGVDLVALHAWSDVGVFPILGMDWRERESQGEEILAERLAGWQEQYPDVHVKRSL 239
Query 241 VCDRPARKLVQKSASAQLVVVGSHGRGGLTGMLLGSVSNAVLHAARVPVIVAR 293
VCD+PA L++++ AQLV+VG+ GRGG GMLLGSVS+ V H+A+VPVIV R
Sbjct 240 VCDKPAHWLLEEAQHAQLVIVGNRGRGGFPGMLLGSVSSTVAHSAKVPVIVVR 292
>gi|120402436|ref|YP_952265.1| UspA domain-containing protein [Mycobacterium vanbaalenii PYR-1]
gi|119955254|gb|ABM12259.1| UspA domain protein [Mycobacterium vanbaalenii PYR-1]
Length=297
Score = 254 bits (650), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 138/284 (49%), Positives = 184/284 (65%), Gaps = 4/284 (1%)
Query 10 VVVGVDGSLESDAAACWGATDAAMRNIPLTVVHVVNADVATWPPMPYPETWGVWQEDEGR 69
VVVGVD S S A W A +A +RNIPL +++ + WP +P P + WQ G+
Sbjct 14 VVVGVDDSPSSQPALEWAAAEAKLRNIPLVILYATTLPIGAWPVVPVPTGFLDWQRQIGQ 73
Query 70 QIVANAVKLAKEAVGADRKLSVKSELVFSTPVPTMVEISNEAEMVVLGSSGRGALARGLL 129
I+ +A ++AKE G + V +E +TP +VE S+ A MVV+GS G+G L R +L
Sbjct 74 DILKDAGQIAKELTGG--AVPVTAEFAVATPTAALVEASHTAGMVVVGSRGQGGLLRKVL 131
Query 130 GSVSSSLVRRAGCPVAVIHSDDAVIPDPQHAPVLVGIDGSPVSELATAVAFDEASRRGVE 189
GS S ++ RA CPV V+H ++ P APV++G DGSP SE A +AF EASRRGV
Sbjct 132 GSTSMGVIHRAHCPVVVVHDEEPA--PPGGAPVVLGFDGSPGSEAAVEIAFQEASRRGVG 189
Query 190 LIAVHAWSDVEVVELPGLDFSAVQQEAELSLAERLAGWQERYPDVPVSRVVVCDRPARKL 249
L+A+H+W E+PG D+ ++ E E A +LA WQ+RYP V V RVVV D PAR+L
Sbjct 190 LVALHSWWSPGAFEMPGFDWEEIRPEVEQEAARQLAPWQKRYPGVAVERVVVSDEPARRL 249
Query 250 VQKSASAQLVVVGSHGRGGLTGMLLGSVSNAVLHAARVPVIVAR 293
V++S SAQL++VGSHG G +TG LLGSVS AV+ AARVPV+V R
Sbjct 250 VERSESAQLLIVGSHGYGAVTGALLGSVSGAVVQAARVPVMVVR 293
>gi|126433324|ref|YP_001069015.1| UspA domain-containing protein [Mycobacterium sp. JLS]
gi|126233124|gb|ABN96524.1| UspA domain protein [Mycobacterium sp. JLS]
Length=294
Score = 254 bits (650), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 148/296 (50%), Positives = 204/296 (69%), Gaps = 3/296 (1%)
Query 1 MSKPRKQHGVVVGVDGSLESDAAACWGATDAAMRNIPLTVVHVVN-ADVATWPPMPYPET 59
MS HG+VVGVDGS AA W A DAA R +PLT+VHV+ D+ W +P P+
Sbjct 1 MSSSVTTHGIVVGVDGSAAGKVAADWAARDAARRGVPLTLVHVIAPKDLQMWIEVPAPQE 60
Query 60 WGVWQEDEGRQIVANAVKLAKEAVGADRKLSVKSELVFSTPVPTMVEISNEAEMVVLGSS 119
+ WQ + +++A A +A+ A +R+L+V ++V T++E+S +A+MVV+GS
Sbjct 61 YLRWQSERSERVMAEATAIAERA-AENRQLTVVRQVVPGEAKATLIEMSKDADMVVVGSR 119
Query 120 GRGALARGLLGSVSSSLVRRAGCPVAVIHSDDAVIPDPQHAPVLVGIDGSPVSELATAVA 179
G GA R LLGSVS+++V A CPVAVIH +D ++ P APV+VG+DGS +E A A+A
Sbjct 120 GLGAWGRRLLGSVSTAVVHHAQCPVAVIHDEDPLMDHPDQAPVVVGVDGSKAAEQAIAIA 179
Query 180 FDEASRRGVELIAVHAWSDVEVVELPGLDFSAVQQEAELSLAERLAGWQERYPDVPVSRV 239
F+EAS RGV+L+AVHAW+DV+ E P + + E +AE LAG+ E YPDV V +V
Sbjct 180 FEEASLRGVDLVAVHAWNDVD-YEFPDIKWVDYTARGERIVAECLAGYCETYPDVTVRKV 238
Query 240 VVCDRPARKLVQKSASAQLVVVGSHGRGGLTGMLLGSVSNAVLHAARVPVIVARQS 295
+V DRPA +L+Q+S +AQL+VVGSHGRGG GMLLGSVS+ V+ +AR+PVIVAR +
Sbjct 239 LVRDRPAHQLLQQSEAAQLLVVGSHGRGGFPGMLLGSVSSEVVQSARMPVIVARSN 294
>gi|118471745|ref|YP_888239.1| universal stress protein family protein [Mycobacterium smegmatis
str. MC2 155]
gi|302595995|sp|A0QZA1.1|Y3950_MYCS2 RecName: Full=Universal stress protein MSMEG_3950; Short=USP
MSMEG_3950
gi|118173032|gb|ABK73928.1| universal stress protein family protein [Mycobacterium smegmatis
str. MC2 155]
Length=294
Score = 254 bits (648), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 140/293 (48%), Positives = 192/293 (66%), Gaps = 1/293 (0%)
Query 1 MSKPRKQHGVVVGVDGSLESDAAACWGATDAAMRNIPLTVVHVVNADVATWPPMPYPETW 60
M + ++G++VGVD S ESDAA W A +A++ + P+T++HV+ V +WP PY T
Sbjct 1 MVQSATEYGILVGVDSSAESDAAVRWAAREASLHDAPITLMHVIAPVVVSWPAGPYMATV 60
Query 61 GVWQEDEGRQIVANAVKLAKEAVGADRKLSVKSELVFSTPVPTMVEISNEAEMVVLGSSG 120
QE+ R + A K+ + +G L+V++E+ + T+++ S A+MVV+G+ G
Sbjct 61 LECQEENARHAIEQAQKVVADCLGETHGLTVQTEIRKESVARTLIDASKSAQMVVVGNRG 120
Query 121 RGALARGLLGSVSSSLVRRAGCPVAVIHSDDAVIPDPQHAPVLVGIDGSPVSELATAVAF 180
GAL R LLGS S+SL+ A PV V+H DD D + PVL+GIDGSP SE+AT+ AF
Sbjct 121 MGALGRVLLGSTSTSLLHYASGPVVVVHGDDQAAHDSR-LPVLLGIDGSPASEVATSHAF 179
Query 181 DEASRRGVELIAVHAWSDVEVVELPGLDFSAVQQEAELSLAERLAGWQERYPDVPVSRVV 240
DEASRRGV+L+A+H W DV + G + ++ LAERLAGWQERYPDV V R V
Sbjct 180 DEASRRGVDLVALHVWIDVGDIPPIGPTWEEQEETGRALLAERLAGWQERYPDVKVHRRV 239
Query 241 VCDRPARKLVQKSASAQLVVVGSHGRGGLTGMLLGSVSNAVLHAARVPVIVAR 293
+PA L++++ AQLVVVGSHGRGG TGMLLGSVS+ V +A PV+V R
Sbjct 240 ERAQPAYWLLEEAKQAQLVVVGSHGRGGFTGMLLGSVSSRVAQSATTPVMVVR 292
>gi|240168804|ref|ZP_04747463.1| hypothetical protein MkanA1_05795 [Mycobacterium kansasii ATCC
12478]
Length=273
Score = 253 bits (647), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 141/271 (53%), Positives = 192/271 (71%), Gaps = 11/271 (4%)
Query 33 MRNIPLTVVHVVNADVAT---WPPMPYPETWGVWQEDEGRQIVANAVKLAKEAVGADRKL 89
MRN+P+ +VHV+ A +AT W +P + WQE+ R+I+ A K+ EA R
Sbjct 1 MRNVPIHLVHVI-APMATSEGWSGLPIIANYADWQEERAREIIEQAGKVVAEATSTSRAP 59
Query 90 SVKSELVFSTPVPTMVEISNEAEMVVLGSSGRGALARGLLGSVSSSLVRRAGCPVAVIHS 149
V SE++ + VP +V++S A+MVV+G G +A LLGSVSS L A CPVAVIH
Sbjct 60 HVTSEVLHAAIVPALVDLSKSADMVVVGCRGHDGVAGALLGSVSSGLAHHAHCPVAVIHD 119
Query 150 DDAVIPDPQHAPVLVGIDGSPVSELATAVAFDEASRRGVELIAVHAWSDVEVVELPGLDF 209
+D + A V+VGIDGSP SELAT +AFDEASRRGVEL+A+HAWSD+ ++ P ++
Sbjct 120 EDVLEARSPQAAVVVGIDGSPTSELATDIAFDEASRRGVELVALHAWSDMGPLDFPSTNW 179
Query 210 SAVQ------QEAELSLAERLAGWQERYPDVPVSRVVVCDRPARKLVQKSASAQLVVVGS 263
+ ++ QE E+ LAERL+GWQERYPDV V +VVVCDRPA +L++++ +AQL+VVGS
Sbjct 180 APIEWRNIEDQEKEV-LAERLSGWQERYPDVVVRKVVVCDRPAPRLLEQAKTAQLLVVGS 238
Query 264 HGRGGLTGMLLGSVSNAVLHAARVPVIVARQ 294
HGRGG GMLLGSVS AV+++A++PVI+AR+
Sbjct 239 HGRGGFPGMLLGSVSRAVVNSAQIPVIIARR 269
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/145 (32%), Positives = 77/145 (54%), Gaps = 12/145 (8%)
Query 7 QHGVVVGVDGSLESDAAACWGATDAAMRNIPLTVVHVVNADVATWPPMPYPET-WG--VW 63
Q VVVG+DGS S+ A +A+ R + L +H + D+ P+ +P T W W
Sbjct 129 QAAVVVGIDGSPTSELATDIAFDEASRRGVELVALHAWS-DMG---PLDFPSTNWAPIEW 184
Query 64 Q--EDEGRQIVANAVKLAKEAVGADRKLSVKSELVFSTPVPTMVEISNEAEMVVLGSSGR 121
+ ED+ ++++A + +E + V+ +V P P ++E + A+++V+GS GR
Sbjct 185 RNIEDQEKEVLAERLSGWQERYP---DVVVRKVVVCDRPAPRLLEQAKTAQLLVVGSHGR 241
Query 122 GALARGLLGSVSSSLVRRAGCPVAV 146
G LLGSVS ++V A PV +
Sbjct 242 GGFPGMLLGSVSRAVVNSAQIPVII 266
>gi|108797698|ref|YP_637895.1| hypothetical protein Mmcs_0719 [Mycobacterium sp. MCS]
gi|119866787|ref|YP_936739.1| UspA domain-containing protein [Mycobacterium sp. KMS]
gi|108768117|gb|ABG06839.1| UspA [Mycobacterium sp. MCS]
gi|119692876|gb|ABL89949.1| UspA domain protein [Mycobacterium sp. KMS]
Length=294
Score = 253 bits (647), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 147/296 (50%), Positives = 204/296 (69%), Gaps = 3/296 (1%)
Query 1 MSKPRKQHGVVVGVDGSLESDAAACWGATDAAMRNIPLTVVHVVN-ADVATWPPMPYPET 59
MS HG+VVGVDGS AA W A DAA R +PLT+VHV+ D+ W +P P+
Sbjct 1 MSSSVTTHGIVVGVDGSAAGKVAADWAARDAARRGVPLTLVHVIAPKDLQMWIEVPAPQE 60
Query 60 WGVWQEDEGRQIVANAVKLAKEAVGADRKLSVKSELVFSTPVPTMVEISNEAEMVVLGSS 119
+ WQ + +++A A +A+ A +R+L+V ++V T++++S +A+MVV+GS
Sbjct 61 YLRWQSERSERVMAEATAIAERA-AENRQLTVVRQVVPGEAKATLIDMSKDADMVVVGSR 119
Query 120 GRGALARGLLGSVSSSLVRRAGCPVAVIHSDDAVIPDPQHAPVLVGIDGSPVSELATAVA 179
G GA R LLGSVS+++V A CPVAVIH +D ++ P APV+VG+DGS +E A A+A
Sbjct 120 GLGAWGRRLLGSVSTAVVHHAQCPVAVIHDEDPLMDHPDQAPVVVGVDGSKAAEQAIAIA 179
Query 180 FDEASRRGVELIAVHAWSDVEVVELPGLDFSAVQQEAELSLAERLAGWQERYPDVPVSRV 239
F+EAS RGV+L+AVHAW+DV+ E P + + E +AE LAG+ E YPDV V +V
Sbjct 180 FEEASLRGVDLVAVHAWNDVD-YEFPDIKWVDYTARGERIVAECLAGYCETYPDVTVRKV 238
Query 240 VVCDRPARKLVQKSASAQLVVVGSHGRGGLTGMLLGSVSNAVLHAARVPVIVARQS 295
+V DRPA +L+Q+S +AQL+VVGSHGRGG GMLLGSVS+ V+ +AR+PVIVAR +
Sbjct 239 LVRDRPAHQLLQQSEAAQLLVVGSHGRGGFPGMLLGSVSSEVVQSARMPVIVARSN 294
>gi|108798074|ref|YP_638271.1| hypothetical protein Mmcs_1102 [Mycobacterium sp. MCS]
gi|119867170|ref|YP_937122.1| UspA domain-containing protein [Mycobacterium sp. KMS]
gi|108768493|gb|ABG07215.1| UspA [Mycobacterium sp. MCS]
gi|119693259|gb|ABL90332.1| UspA domain protein [Mycobacterium sp. KMS]
Length=292
Score = 253 bits (646), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 145/284 (52%), Positives = 187/284 (66%), Gaps = 3/284 (1%)
Query 10 VVVGVDGSLESDAAACWGATDAAMRNIPLTVVHVVNADVATWPPMPYPETWGVWQEDEGR 69
+VVGVDGS SD A W A +A +R LT+V+ A +A W +P P WQ + G+
Sbjct 10 IVVGVDGSPTSDHAVRWAAGEAKLRGSRLTLVYAAPASLAAWSAVPAPVGLLDWQREMGQ 69
Query 70 QIVANAVKLAKEAVGADRKLSVKSELVFSTPVPTMVEISNEAEMVVLGSSGRGALARGLL 129
Q++ A ++A G + V SE V + P +VE+S A++VV+GS GRGAL R +L
Sbjct 70 QVLEVAAQIADGVTGG--AVEVSSEFVLAAPAMELVELSRRAQLVVVGSRGRGALTRTVL 127
Query 130 GSVSSSLVRRAGCPVAVIHSDDAVIPDPQHAPVLVGIDGSPVSELATAVAFDEASRRGVE 189
GSVSS+LV RA CPVAVIH + V PDPQ APV++G DGS E ATA+AF+EA RRGVE
Sbjct 128 GSVSSALVHRAHCPVAVIHDEAPVPPDPQ-APVVLGHDGSADCESATALAFEEAGRRGVE 186
Query 190 LIAVHAWSDVEVVELPGLDFSAVQQEAELSLAERLAGWQERYPDVPVSRVVVCDRPARKL 249
L+ V AW ELPG + + + L+E+LAGWQ R+PDV V RV V D+PAR+L
Sbjct 187 LVVVRAWWSPGAFELPGANADELLPAVDRELSEQLAGWQRRFPDVAVRRVAVLDQPARRL 246
Query 250 VQKSASAQLVVVGSHGRGGLTGMLLGSVSNAVLHAARVPVIVAR 293
V++S SAQL+VVGS G G + LLGSVS AV+ A R+PVIV R
Sbjct 247 VEQSESAQLLVVGSRGHGAVASALLGSVSTAVVQAVRIPVIVVR 290
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/149 (34%), Positives = 76/149 (52%), Gaps = 13/149 (8%)
Query 4 PRKQHGVVVGVDGSLESDAAACWGATDAAMRNIPLTVVHVVNADVATWPPMPYPETWGVW 63
P Q VV+G DGS + ++A +A R + L VV A W P + E G
Sbjct 153 PDPQAPVVLGHDGSADCESATALAFEEAGRRGVELVVVR------AWWSPGAF-ELPGA- 204
Query 64 QEDEGRQIVANAVKLAKEAVGADRKL---SVKSELVFSTPVPTMVEISNEAEMVVLGSSG 120
DE + A +L+++ G R+ +V+ V P +VE S A+++V+GS G
Sbjct 205 NADE--LLPAVDRELSEQLAGWQRRFPDVAVRRVAVLDQPARRLVEQSESAQLLVVGSRG 262
Query 121 RGALARGLLGSVSSSLVRRAGCPVAVIHS 149
GA+A LLGSVS+++V+ PV V+ S
Sbjct 263 HGAVASALLGSVSTAVVQAVRIPVIVVRS 291
>gi|333991848|ref|YP_004524462.1| hypothetical protein JDM601_3208 [Mycobacterium sp. JDM601]
gi|333487816|gb|AEF37208.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=290
Score = 253 bits (646), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 158/290 (55%), Positives = 202/290 (70%), Gaps = 13/290 (4%)
Query 10 VVVGVDGSLESDAAACWGATDAAMRNIPLTVVHVVNADVA-TWPPMPYPETWGVWQEDEG 68
++VGVDGS S+AA W A AA+ N+PLT+VHV+ V T+P P P + WQ+++G
Sbjct 5 ILVGVDGSPSSNAAVEWAARAAALHNLPLTLVHVLAPPVVMTFPETPMPPGYTEWQQEQG 64
Query 69 RQIVANAVKLAKEAVGADRKLSVKSELVFSTPVPTMVEISNEAEMVVLGSSGRGALARGL 128
+ + AV +A+ L V + +V + VP +V+ + +A +V+GS G G L R L
Sbjct 65 ERHLREAVAIAETQ---GENLRVDARIVVGSTVPMLVDATRDAARLVVGSRGHGLLRRSL 121
Query 129 LGSVSSSLVRRAGCPVAVIH-----SDDAVIPDPQHAPVLVGIDGSPVSELATAVAFDEA 183
LGSVSSSLVR A CPV VIH SD P APV+VGIDGSPVSE AT VAF EA
Sbjct 122 LGSVSSSLVRHAHCPVVVIHEPHPDSD----PHSDTAPVVVGIDGSPVSEAATEVAFAEA 177
Query 184 SRRGVELIAVHAWSDVEVVELPGLDFSAVQQEAELSLAERLAGWQERYPDVPVSRVVVCD 243
S RGVEL+AV+AW D +++ PG+D +A+ + EL+LAERLAGW+ERYPDV V RVVVCD
Sbjct 178 SLRGVELVAVYAWHDSGMLDFPGIDLAAMASDGELALAERLAGWRERYPDVTVRRVVVCD 237
Query 244 RPARKLVQKSASAQLVVVGSHGRGGLTGMLLGSVSNAVLHAARVPVIVAR 293
RPA +L+++S AQLVVVGSHGRGG TGMLLGSVS AV+ +A PV+V R
Sbjct 238 RPADQLIEQSKQAQLVVVGSHGRGGFTGMLLGSVSQAVVQSAHAPVLVVR 287
Lambda K H
0.316 0.131 0.382
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 489554810128
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40