BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv2007c Length=114 Score E Sequences producing significant alignments: (Bits) Value gi|15609144|ref|NP_216523.1| ferredoxin FDXA [Mycobacterium tube... 229 7e-59 gi|183982996|ref|YP_001851287.1| ferredoxin FdxA_2 [Mycobacteriu... 182 1e-44 gi|108799685|ref|YP_639882.1| 4Fe-4S ferredoxin, iron-sulfur bin... 170 6e-41 gi|117927707|ref|YP_872258.1| 4Fe-4S ferredoxin iron-sulfur bind... 167 5e-40 gi|296170897|ref|ZP_06852434.1| ferredoxin [Mycobacterium parasc... 167 5e-40 gi|120401325|ref|YP_951154.1| 4Fe-4S ferredoxin iron-sulfur bind... 166 7e-40 gi|41408824|ref|NP_961660.1| FdxA [Mycobacterium avium subsp. pa... 166 8e-40 gi|108802249|ref|YP_642446.1| 4Fe-4S ferredoxin, iron-sulfur bin... 165 2e-39 gi|145220987|ref|YP_001131665.1| 4Fe-4S ferredoxin iron-sulfur b... 165 2e-39 gi|183982094|ref|YP_001850385.1| ferredoxin FdxA_1 [Mycobacteriu... 164 3e-39 gi|342858552|ref|ZP_08715207.1| ferredoxin FdxA [Mycobacterium c... 164 6e-39 gi|315442042|ref|YP_004074921.1| ferredoxin [Mycobacterium sp. S... 163 7e-39 gi|240170645|ref|ZP_04749304.1| ferredoxin FdxA_1 [Mycobacterium... 163 8e-39 gi|254822186|ref|ZP_05227187.1| ferredoxin FdxA_1 [Mycobacterium... 162 1e-38 gi|254774707|ref|ZP_05216223.1| ferredoxin FdxA_1 [Mycobacterium... 161 3e-38 gi|118618608|ref|YP_906940.1| ferredoxin FdxA_1 [Mycobacterium u... 157 5e-37 gi|331698393|ref|YP_004334632.1| 4Fe-4S ferredoxin iron-sulfur b... 156 1e-36 gi|118470782|ref|YP_885518.1| ferredoxin FdxA [Mycobacterium sme... 156 1e-36 gi|326384561|ref|ZP_08206240.1| 4Fe-4S ferredoxin iron-sulfur bi... 154 3e-36 gi|317125122|ref|YP_004099234.1| ferredoxin FdxA [Intrasporangiu... 153 7e-36 gi|331697009|ref|YP_004333248.1| 4Fe-4S ferredoxin iron-sulfur b... 153 8e-36 gi|119714164|ref|YP_919306.1| 4Fe-4S ferredoxin iron-sulfur bind... 152 2e-35 gi|331697480|ref|YP_004333719.1| 4Fe-4S ferredoxin iron-sulfur b... 152 2e-35 gi|254818988|ref|ZP_05223989.1| putative ferredoxin FdxA [Mycoba... 151 3e-35 gi|119718522|ref|YP_925487.1| 4Fe-4S ferredoxin iron-sulfur bind... 150 5e-35 gi|258653795|ref|YP_003202951.1| 4Fe-4S ferredoxin iron-sulfur b... 145 1e-33 gi|269784345|emb|CBH51374.1| ferredoxin [Amycolatopsis balhimyci... 142 2e-32 gi|312200512|ref|YP_004020573.1| ferredoxin [Frankia sp. EuI1c] ... 141 4e-32 gi|111025066|ref|YP_707486.1| ferredoxin [Rhodococcus jostii RHA... 140 9e-32 gi|111220922|ref|YP_711716.1| ferredoxin [Frankia alni ACN14a] >... 140 9e-32 gi|226359497|ref|YP_002777274.1| 7Fe ferredoxin [Rhodococcus opa... 139 1e-31 gi|311740712|ref|ZP_07714539.1| ferredoxin [Corynebacterium pseu... 137 4e-31 gi|296119440|ref|ZP_06837998.1| ferredoxin [Corynebacterium ammo... 135 1e-30 gi|227832808|ref|YP_002834515.1| Ferredoxin [Corynebacterium aur... 135 1e-30 gi|172040342|ref|YP_001800056.1| hypothetical protein cur_0662 [... 135 2e-30 gi|314922814|gb|EFS86645.1| 4Fe-4S binding domain protein [Propi... 134 4e-30 gi|314966245|gb|EFT10344.1| 4Fe-4S binding domain protein [Propi... 134 4e-30 gi|227503767|ref|ZP_03933816.1| ferredoxin [Corynebacterium stri... 134 5e-30 gi|313836966|gb|EFS74680.1| 4Fe-4S binding domain protein [Propi... 134 6e-30 gi|340774597|gb|EGR97081.1| ferredoxin [Propionibacterium acnes ... 134 6e-30 gi|319950850|ref|ZP_08024734.1| 7Fe ferredoxin [Dietzia cinnamea... 134 6e-30 gi|336326022|ref|YP_004605988.1| Ferredoxin [Corynebacterium res... 134 6e-30 gi|25027716|ref|NP_737770.1| putative ferredoxin [Corynebacteriu... 133 7e-30 gi|19552328|ref|NP_600330.1| ferredoxin 3 [Corynebacterium gluta... 133 9e-30 gi|282854408|ref|ZP_06263745.1| putative ferredoxin [Propionibac... 133 9e-30 gi|86743147|ref|YP_483547.1| 4Fe-4S ferredoxin, iron-sulfur bind... 133 9e-30 gi|313763939|gb|EFS35303.1| 4Fe-4S binding domain protein [Propi... 133 1e-29 gi|311111810|ref|YP_003983032.1| ferredoxin [Rothia dentocariosa... 133 1e-29 gi|284989663|ref|YP_003408217.1| 4Fe-4S ferredoxin iron-sulfur b... 133 1e-29 gi|331699698|ref|YP_004335937.1| 4Fe-4S ferredoxin iron-sulfur b... 132 1e-29 >gi|15609144|ref|NP_216523.1| ferredoxin FDXA [Mycobacterium tuberculosis H37Rv] gi|15841489|ref|NP_336526.1| ferredoxin [Mycobacterium tuberculosis CDC1551] gi|31793187|ref|NP_855680.1| ferredoxin FDXA [Mycobacterium bovis AF2122/97] 82 more sequence titles Length=114 Score = 229 bits (585), Expect = 7e-59, Method: Compositional matrix adjust. Identities = 113/114 (99%), Positives = 114/114 (100%), Gaps = 0/114 (0%) Query 1 VTYVIGSECVDVMDKSCVQECPVDCIYEGARMLYINPDECVDCGACKPACRVEAIYWEGD 60 +TYVIGSECVDVMDKSCVQECPVDCIYEGARMLYINPDECVDCGACKPACRVEAIYWEGD Sbjct 1 MTYVIGSECVDVMDKSCVQECPVDCIYEGARMLYINPDECVDCGACKPACRVEAIYWEGD 60 Query 61 LPDDQHQHLGDNAAFFHQVLPGRVAPLGSPGGAAAVGPIGVDTPLVAAIPVECP 114 LPDDQHQHLGDNAAFFHQVLPGRVAPLGSPGGAAAVGPIGVDTPLVAAIPVECP Sbjct 61 LPDDQHQHLGDNAAFFHQVLPGRVAPLGSPGGAAAVGPIGVDTPLVAAIPVECP 114 >gi|183982996|ref|YP_001851287.1| ferredoxin FdxA_2 [Mycobacterium marinum M] gi|183176322|gb|ACC41432.1| ferredoxin FdxA_2 [Mycobacterium marinum M] Length=114 Score = 182 bits (462), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 86/110 (79%), Positives = 94/110 (86%), Gaps = 0/110 (0%) Query 1 VTYVIGSECVDVMDKSCVQECPVDCIYEGARMLYINPDECVDCGACKPACRVEAIYWEGD 60 +TYVIG ECVDV +KSC QECPVDCIYEGAR +YINPDECVDCGACK CRV AIYWE D Sbjct 1 MTYVIGRECVDVAEKSCTQECPVDCIYEGARTMYINPDECVDCGACKTTCRVGAIYWEED 60 Query 61 LPDDQHQHLGDNAAFFHQVLPGRVAPLGSPGGAAAVGPIGVDTPLVAAIP 110 LPD+Q HL DNAAFF ++LPGR APLGSPGGA VG IGVDTPL+AA+P Sbjct 61 LPDEQRHHLADNAAFFREILPGRDAPLGSPGGADTVGRIGVDTPLIAAMP 110 >gi|108799685|ref|YP_639882.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Mycobacterium sp. MCS] gi|119868795|ref|YP_938747.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Mycobacterium sp. KMS] gi|126435329|ref|YP_001071020.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Mycobacterium sp. JLS] gi|108770104|gb|ABG08826.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Mycobacterium sp. MCS] gi|119694884|gb|ABL91957.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Mycobacterium sp. KMS] gi|126235129|gb|ABN98529.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Mycobacterium sp. JLS] Length=114 Score = 170 bits (431), Expect = 6e-41, Method: Compositional matrix adjust. Identities = 79/109 (73%), Positives = 96/109 (89%), Gaps = 0/109 (0%) Query 1 VTYVIGSECVDVMDKSCVQECPVDCIYEGARMLYINPDECVDCGACKPACRVEAIYWEGD 60 +TYVIGS CVDV+DKSCV ECPVDCIYEG R++YINPDECVDCGAC+ C+++AI++E D Sbjct 1 MTYVIGSACVDVVDKSCVPECPVDCIYEGDRVMYINPDECVDCGACRVICKMDAIFYETD 60 Query 61 LPDDQHQHLGDNAAFFHQVLPGRVAPLGSPGGAAAVGPIGVDTPLVAAI 109 LP+DQ +HL DNAAFF +VLPGR APLG+PGG+A VG IGVDTPL+A + Sbjct 61 LPEDQQRHLADNAAFFTEVLPGRDAPLGAPGGSATVGRIGVDTPLIAGL 109 >gi|117927707|ref|YP_872258.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Acidothermus cellulolyticus 11B] gi|117648170|gb|ABK52272.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Acidothermus cellulolyticus 11B] Length=117 Score = 167 bits (423), Expect = 5e-40, Method: Compositional matrix adjust. Identities = 79/110 (72%), Positives = 94/110 (86%), Gaps = 0/110 (0%) Query 1 VTYVIGSECVDVMDKSCVQECPVDCIYEGARMLYINPDECVDCGACKPACRVEAIYWEGD 60 +TYVI C+DVMD++CV+ECPVDCIYEGAR LYI+PDECVDCGAC+P C VEAIY+E D Sbjct 1 MTYVIAEPCIDVMDRACVEECPVDCIYEGARSLYIHPDECVDCGACEPVCPVEAIYYEDD 60 Query 61 LPDDQHQHLGDNAAFFHQVLPGRVAPLGSPGGAAAVGPIGVDTPLVAAIP 110 LP+ + DNAAFFH+ LPGR APLGSPGGA+ +GP+GVDTPLVAA+P Sbjct 61 LPEQWTVYREDNAAFFHETLPGRDAPLGSPGGASKLGPLGVDTPLVAAVP 110 >gi|296170897|ref|ZP_06852434.1| ferredoxin [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295894446|gb|EFG74190.1| ferredoxin [Mycobacterium parascrofulaceum ATCC BAA-614] Length=118 Score = 167 bits (423), Expect = 5e-40, Method: Compositional matrix adjust. Identities = 80/110 (73%), Positives = 94/110 (86%), Gaps = 0/110 (0%) Query 1 VTYVIGSECVDVMDKSCVQECPVDCIYEGARMLYINPDECVDCGACKPACRVEAIYWEGD 60 +TYVIG C+DVMD++CV ECPVDCIYEG R LYI+PDECVDCGAC+P C V+AIY+E D Sbjct 1 MTYVIGKPCIDVMDRACVDECPVDCIYEGGRALYIHPDECVDCGACEPVCPVDAIYYEDD 60 Query 61 LPDDQHQHLGDNAAFFHQVLPGRVAPLGSPGGAAAVGPIGVDTPLVAAIP 110 LPD+ + +L DNAAFF + LPGR APLGSPGGAA +GP+GVDTPLVAA P Sbjct 61 LPDELNPYLADNAAFFAETLPGRDAPLGSPGGAAKMGPLGVDTPLVAAQP 110 >gi|120401325|ref|YP_951154.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Mycobacterium vanbaalenii PYR-1] gi|119954143|gb|ABM11148.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Mycobacterium vanbaalenii PYR-1] Length=117 Score = 166 bits (421), Expect = 7e-40, Method: Compositional matrix adjust. Identities = 79/110 (72%), Positives = 92/110 (84%), Gaps = 0/110 (0%) Query 1 VTYVIGSECVDVMDKSCVQECPVDCIYEGARMLYINPDECVDCGACKPACRVEAIYWEGD 60 +TYVIGS CVD++DKSCVQECP DCIYEG R +YINP+ECVDCGAC+ ACRV+AIY+E D Sbjct 1 MTYVIGSACVDIVDKSCVQECPADCIYEGDRAMYINPNECVDCGACRIACRVDAIYYETD 60 Query 61 LPDDQHQHLGDNAAFFHQVLPGRVAPLGSPGGAAAVGPIGVDTPLVAAIP 110 LPD++ + L DNAAFF L GR APLG PGGAA VG +G DTPLVAA+P Sbjct 61 LPDEEMEFLEDNAAFFTMTLAGRDAPLGDPGGAAKVGRVGADTPLVAALP 110 >gi|41408824|ref|NP_961660.1| FdxA [Mycobacterium avium subsp. paratuberculosis K-10] gi|118462225|ref|YP_882682.1| ferredoxin FdxA [Mycobacterium avium 104] gi|254775951|ref|ZP_05217467.1| putative ferredoxin FdxA [Mycobacterium avium subsp. avium ATCC 25291] gi|41397183|gb|AAS05043.1| FdxA [Mycobacterium avium subsp. paratuberculosis K-10] gi|118163512|gb|ABK64409.1| putative ferredoxin FdxA [Mycobacterium avium 104] gi|336458901|gb|EGO37858.1| ferredoxin [Mycobacterium avium subsp. paratuberculosis S397] Length=118 Score = 166 bits (421), Expect = 8e-40, Method: Compositional matrix adjust. Identities = 80/110 (73%), Positives = 92/110 (84%), Gaps = 0/110 (0%) Query 1 VTYVIGSECVDVMDKSCVQECPVDCIYEGARMLYINPDECVDCGACKPACRVEAIYWEGD 60 +TYVIG C+DVMD++CV ECPVDCIYEG R LYI+PDECVDCGAC+P C VEAIY+E D Sbjct 1 MTYVIGKPCIDVMDRACVDECPVDCIYEGGRALYIHPDECVDCGACEPVCPVEAIYYEDD 60 Query 61 LPDDQHQHLGDNAAFFHQVLPGRVAPLGSPGGAAAVGPIGVDTPLVAAIP 110 LP+D HL DN AFF + LPGR APLGSPGGAA +GP+GVDTPLVA+ P Sbjct 61 LPEDLKPHLADNEAFFAEPLPGRDAPLGSPGGAAKLGPLGVDTPLVASQP 110 >gi|108802249|ref|YP_642446.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Mycobacterium sp. MCS] gi|119871402|ref|YP_941354.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Mycobacterium sp. KMS] gi|126438231|ref|YP_001073922.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Mycobacterium sp. JLS] gi|108772668|gb|ABG11390.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Mycobacterium sp. MCS] gi|119697491|gb|ABL94564.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Mycobacterium sp. KMS] gi|126238031|gb|ABO01432.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Mycobacterium sp. JLS] Length=115 Score = 165 bits (418), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 79/112 (71%), Positives = 89/112 (80%), Gaps = 0/112 (0%) Query 1 VTYVIGSECVDVMDKSCVQECPVDCIYEGARMLYINPDECVDCGACKPACRVEAIYWEGD 60 +TYVIG CVDVMD+SCV+ECPVDCIYEG R LYI+PDECVDCGAC+P C VEAIY+E D Sbjct 1 MTYVIGKACVDVMDRSCVEECPVDCIYEGGRSLYIHPDECVDCGACEPVCPVEAIYYEDD 60 Query 61 LPDDQHQHLGDNAAFFHQVLPGRVAPLGSPGGAAAVGPIGVDTPLVAAIPVE 112 LP DQ +HL DNAAFF L GR PLGSPGGAA VGP+ D PLV +P + Sbjct 61 LPADQREHLADNAAFFFDTLAGRDEPLGSPGGAAKVGPVQADAPLVVGLPRQ 112 >gi|145220987|ref|YP_001131665.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Mycobacterium gilvum PYR-GCK] gi|145213473|gb|ABP42877.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Mycobacterium gilvum PYR-GCK] Length=142 Score = 165 bits (417), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 77/112 (69%), Positives = 90/112 (81%), Gaps = 0/112 (0%) Query 1 VTYVIGSECVDVMDKSCVQECPVDCIYEGARMLYINPDECVDCGACKPACRVEAIYWEGD 60 +TYVIGS CVD++DKSCVQECP DCIYEG R +YINP+ECVDCGAC+ ACRV+AIY+E D Sbjct 26 MTYVIGSACVDIVDKSCVQECPADCIYEGDRAMYINPNECVDCGACRIACRVDAIYYETD 85 Query 61 LPDDQHQHLGDNAAFFHQVLPGRVAPLGSPGGAAAVGPIGVDTPLVAAIPVE 112 LPD++ L DNAAFF L GR PLG PGGAA +G +G DTPLVAA+P Sbjct 86 LPDEELAFLDDNAAFFTTTLSGRDEPLGDPGGAAKLGRVGADTPLVAALPAS 137 >gi|183982094|ref|YP_001850385.1| ferredoxin FdxA_1 [Mycobacterium marinum M] gi|183175420|gb|ACC40530.1| ferredoxin FdxA_1 [Mycobacterium marinum M] Length=115 Score = 164 bits (416), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 78/110 (71%), Positives = 90/110 (82%), Gaps = 0/110 (0%) Query 1 VTYVIGSECVDVMDKSCVQECPVDCIYEGARMLYINPDECVDCGACKPACRVEAIYWEGD 60 +TYVIG C+DVMD++CV+ECPVDCIYEG R LYI+PDECVDCGAC+P C VEAIY+E D Sbjct 1 MTYVIGKPCIDVMDRACVEECPVDCIYEGGRSLYIHPDECVDCGACEPVCPVEAIYYEDD 60 Query 61 LPDDQHQHLGDNAAFFHQVLPGRVAPLGSPGGAAAVGPIGVDTPLVAAIP 110 LP + H HL DN AFF + LPGR PLGSPGGAA +G +GVDTPLVA P Sbjct 61 LPQELHPHLADNVAFFTETLPGRDGPLGSPGGAAKIGRLGVDTPLVAGHP 110 >gi|342858552|ref|ZP_08715207.1| ferredoxin FdxA [Mycobacterium colombiense CECT 3035] gi|342134256|gb|EGT87436.1| ferredoxin FdxA [Mycobacterium colombiense CECT 3035] Length=118 Score = 164 bits (414), Expect = 6e-39, Method: Compositional matrix adjust. Identities = 78/110 (71%), Positives = 90/110 (82%), Gaps = 0/110 (0%) Query 1 VTYVIGSECVDVMDKSCVQECPVDCIYEGARMLYINPDECVDCGACKPACRVEAIYWEGD 60 +TYVIG C+DVMD++CV ECPVDCIYEG R LYI+PDECVDCGAC+P C VEAIY+E D Sbjct 1 MTYVIGKPCIDVMDRACVDECPVDCIYEGGRALYIHPDECVDCGACEPVCPVEAIYYEDD 60 Query 61 LPDDQHQHLGDNAAFFHQVLPGRVAPLGSPGGAAAVGPIGVDTPLVAAIP 110 LP+D +L DN AFF + LPGR APLGSPGGA +GP+GVDTPLVA P Sbjct 61 LPEDLKPYLADNEAFFTETLPGRDAPLGSPGGAGKLGPLGVDTPLVAGQP 110 >gi|315442042|ref|YP_004074921.1| ferredoxin [Mycobacterium sp. Spyr1] gi|315260345|gb|ADT97086.1| ferredoxin [Mycobacterium sp. Spyr1] Length=117 Score = 163 bits (413), Expect = 7e-39, Method: Compositional matrix adjust. Identities = 77/110 (70%), Positives = 90/110 (82%), Gaps = 0/110 (0%) Query 1 VTYVIGSECVDVMDKSCVQECPVDCIYEGARMLYINPDECVDCGACKPACRVEAIYWEGD 60 +TYVIGS CVD++DKSCVQECP DCIYEG R +YINP+ECVDCGAC+ ACRV+AIY+E D Sbjct 1 MTYVIGSACVDIVDKSCVQECPADCIYEGDRAMYINPNECVDCGACRIACRVDAIYYETD 60 Query 61 LPDDQHQHLGDNAAFFHQVLPGRVAPLGSPGGAAAVGPIGVDTPLVAAIP 110 LPD++ L DNAAFF L GR PLG PGGAA +G +G DTPLVAA+P Sbjct 61 LPDEELAFLDDNAAFFTTTLSGRDEPLGDPGGAAKLGRVGADTPLVAALP 110 >gi|240170645|ref|ZP_04749304.1| ferredoxin FdxA_1 [Mycobacterium kansasii ATCC 12478] Length=118 Score = 163 bits (412), Expect = 8e-39, Method: Compositional matrix adjust. Identities = 78/110 (71%), Positives = 91/110 (83%), Gaps = 0/110 (0%) Query 1 VTYVIGSECVDVMDKSCVQECPVDCIYEGARMLYINPDECVDCGACKPACRVEAIYWEGD 60 +TYVIG C+DVMD++CV+ECPVDCIYEG R LYI+PDECVDCGAC+P C VEAIY+E D Sbjct 1 MTYVIGKPCIDVMDRACVEECPVDCIYEGGRALYIHPDECVDCGACEPVCPVEAIYYEDD 60 Query 61 LPDDQHQHLGDNAAFFHQVLPGRVAPLGSPGGAAAVGPIGVDTPLVAAIP 110 LP + + DNAAFF + LPGR PLGSPGGAA +GP+GVDTPLVAA P Sbjct 61 LPAELEPYRADNAAFFTETLPGRDEPLGSPGGAAKIGPLGVDTPLVAAEP 110 >gi|254822186|ref|ZP_05227187.1| ferredoxin FdxA_1 [Mycobacterium intracellulare ATCC 13950] Length=117 Score = 162 bits (411), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 77/114 (68%), Positives = 93/114 (82%), Gaps = 0/114 (0%) Query 1 VTYVIGSECVDVMDKSCVQECPVDCIYEGARMLYINPDECVDCGACKPACRVEAIYWEGD 60 + YVIG CVDVMD++CV+ECPVDCIYEG R LYI+PDECVDCGAC+P C VEAIY+E D Sbjct 1 MAYVIGKPCVDVMDRACVEECPVDCIYEGGRALYIHPDECVDCGACEPVCPVEAIYYEDD 60 Query 61 LPDDQHQHLGDNAAFFHQVLPGRVAPLGSPGGAAAVGPIGVDTPLVAAIPVECP 114 LP++ + DNAAFF + L GR PLGSPGGAA +GP+GVDTPLVA++P + P Sbjct 61 LPEELQPYQADNAAFFSETLEGRDGPLGSPGGAAKIGPLGVDTPLVASLPKQEP 114 >gi|254774707|ref|ZP_05216223.1| ferredoxin FdxA_1 [Mycobacterium avium subsp. avium ATCC 25291] Length=117 Score = 161 bits (408), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 77/114 (68%), Positives = 92/114 (81%), Gaps = 0/114 (0%) Query 1 VTYVIGSECVDVMDKSCVQECPVDCIYEGARMLYINPDECVDCGACKPACRVEAIYWEGD 60 + YVIG CVDVMD++CV+ECPVDCIYEG R LYI+PDECVDCGAC+P C VEAIY+E D Sbjct 1 MAYVIGKPCVDVMDRACVEECPVDCIYEGGRALYIHPDECVDCGACEPVCPVEAIYYEDD 60 Query 61 LPDDQHQHLGDNAAFFHQVLPGRVAPLGSPGGAAAVGPIGVDTPLVAAIPVECP 114 LP++ + DNAAFF + L GR PLGSPGGAA +GP+GVDTPLVA +P + P Sbjct 61 LPEELQPYQADNAAFFSETLQGRDEPLGSPGGAAKIGPLGVDTPLVANLPKQEP 114 >gi|118618608|ref|YP_906940.1| ferredoxin FdxA_1 [Mycobacterium ulcerans Agy99] gi|118570718|gb|ABL05469.1| ferredoxin FdxA_1 [Mycobacterium ulcerans Agy99] Length=115 Score = 157 bits (397), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 75/110 (69%), Positives = 87/110 (80%), Gaps = 0/110 (0%) Query 1 VTYVIGSECVDVMDKSCVQECPVDCIYEGARMLYINPDECVDCGACKPACRVEAIYWEGD 60 +TYVIG C+DV D++CV+ECPVDCIYEG R LYI+PDE VDCGAC+P C VEAIY+E D Sbjct 1 MTYVIGKPCIDVTDRACVEECPVDCIYEGGRSLYIHPDEFVDCGACEPVCPVEAIYYEDD 60 Query 61 LPDDQHQHLGDNAAFFHQVLPGRVAPLGSPGGAAAVGPIGVDTPLVAAIP 110 LP + H HL DN AFF + LPGR PLGSPGGAA + +GVDTPLVA P Sbjct 61 LPQELHPHLADNVAFFTETLPGRDGPLGSPGGAAKISRLGVDTPLVAGHP 110 >gi|331698393|ref|YP_004334632.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Pseudonocardia dioxanivorans CB1190] gi|326953082|gb|AEA26779.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Pseudonocardia dioxanivorans CB1190] Length=114 Score = 156 bits (394), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 76/110 (70%), Positives = 88/110 (80%), Gaps = 0/110 (0%) Query 1 VTYVIGSECVDVMDKSCVQECPVDCIYEGARMLYINPDECVDCGACKPACRVEAIYWEGD 60 + YVIG CVDV+D++CV ECPVDCIYEG R LYI+PDECVDCGAC+P C VEAIY+E D Sbjct 1 MAYVIGLPCVDVLDRACVDECPVDCIYEGERALYIHPDECVDCGACEPVCPVEAIYYEDD 60 Query 61 LPDDQHQHLGDNAAFFHQVLPGRVAPLGSPGGAAAVGPIGVDTPLVAAIP 110 LP+ ++ DNA FF + LPGR APLGSPGGAA +GPIG DTPLVA P Sbjct 61 LPESLQEYQADNARFFAEPLPGRDAPLGSPGGAAKLGPIGADTPLVAGQP 110 >gi|118470782|ref|YP_885518.1| ferredoxin FdxA [Mycobacterium smegmatis str. MC2 155] gi|118172069|gb|ABK72965.1| putative ferredoxin FdxA [Mycobacterium smegmatis str. MC2 155] Length=114 Score = 156 bits (394), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 75/110 (69%), Positives = 88/110 (80%), Gaps = 0/110 (0%) Query 1 VTYVIGSECVDVMDKSCVQECPVDCIYEGARMLYINPDECVDCGACKPACRVEAIYWEGD 60 +TYVIG CVDV D++CV ECPVDCIYEGARMLYI+PDECVDCGAC+P C VEAIY+E D Sbjct 1 MTYVIGRPCVDVKDRACVDECPVDCIYEGARMLYIHPDECVDCGACEPVCPVEAIYYEDD 60 Query 61 LPDDQHQHLGDNAAFFHQVLPGRVAPLGSPGGAAAVGPIGVDTPLVAAIP 110 LP+D + +NA FF VLPGR PLGSPGGAA +G + DTP+VA +P Sbjct 61 LPEDLQPYQEENAKFFTDVLPGRAQPLGSPGGAAKLGVVDADTPMVAELP 110 >gi|326384561|ref|ZP_08206240.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Gordonia neofelifaecis NRRL B-59395] gi|326196695|gb|EGD53890.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Gordonia neofelifaecis NRRL B-59395] Length=116 Score = 154 bits (390), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 74/110 (68%), Positives = 89/110 (81%), Gaps = 0/110 (0%) Query 1 VTYVIGSECVDVMDKSCVQECPVDCIYEGARMLYINPDECVDCGACKPACRVEAIYWEGD 60 +TYVI CVDVMD++CV+ECPVDCIYEG R LYI+PDECVDCGAC+P C V+AI++E D Sbjct 1 MTYVIALPCVDVMDRACVEECPVDCIYEGGRSLYIHPDECVDCGACEPVCPVDAIFYEDD 60 Query 61 LPDDQHQHLGDNAAFFHQVLPGRVAPLGSPGGAAAVGPIGVDTPLVAAIP 110 LPD+ + DNA FF LPGR APLGSPGGAA +GP+G D PLVA++P Sbjct 61 LPDEWTPYTTDNADFFVTTLPGRDAPLGSPGGAAKIGPVGSDGPLVASLP 110 >gi|317125122|ref|YP_004099234.1| ferredoxin FdxA [Intrasporangium calvum DSM 43043] gi|315589210|gb|ADU48507.1| putative ferredoxin FdxA [Intrasporangium calvum DSM 43043] Length=118 Score = 153 bits (387), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 73/110 (67%), Positives = 87/110 (80%), Gaps = 0/110 (0%) Query 1 VTYVIGSECVDVMDKSCVQECPVDCIYEGARMLYINPDECVDCGACKPACRVEAIYWEGD 60 +TYVIGS C+DV D++CV+ECPVDCIYEG R LYI+PDECVDCGAC+P C VEAI++E D Sbjct 1 MTYVIGSPCIDVKDRACVEECPVDCIYEGQRSLYIHPDECVDCGACEPVCPVEAIFYEDD 60 Query 61 LPDDQHQHLGDNAAFFHQVLPGRVAPLGSPGGAAAVGPIGVDTPLVAAIP 110 LP D +L DNA FF + + G+ PLGSPGGAAAVG + DTPLV A P Sbjct 61 LPPDLEPYLQDNADFFEETMAGQAEPLGSPGGAAAVGTLPFDTPLVTAFP 110 >gi|331697009|ref|YP_004333248.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Pseudonocardia dioxanivorans CB1190] gi|326951698|gb|AEA25395.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Pseudonocardia dioxanivorans CB1190] Length=120 Score = 153 bits (387), Expect = 8e-36, Method: Compositional matrix adjust. Identities = 74/109 (68%), Positives = 85/109 (78%), Gaps = 0/109 (0%) Query 1 VTYVIGSECVDVMDKSCVQECPVDCIYEGARMLYINPDECVDCGACKPACRVEAIYWEGD 60 +TYVI CVDV D++CV ECPVDCIYEG R LYI+PDECVDCGAC+P C VEAI++E D Sbjct 1 MTYVIALPCVDVKDRACVDECPVDCIYEGGRSLYIHPDECVDCGACEPVCPVEAIFYEDD 60 Query 61 LPDDQHQHLGDNAAFFHQVLPGRVAPLGSPGGAAAVGPIGVDTPLVAAI 109 LPD HL DNAAFF LPGR APLGSPGGAA +GP+ DT LV+ + Sbjct 61 LPDRWAAHLEDNAAFFTTALPGRAAPLGSPGGAAKLGPLAADTVLVSGL 109 >gi|119714164|ref|YP_919306.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Nocardioides sp. JS614] gi|119526073|gb|ABL79443.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Nocardioides sp. JS614] Length=117 Score = 152 bits (384), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 73/112 (66%), Positives = 87/112 (78%), Gaps = 0/112 (0%) Query 1 VTYVIGSECVDVMDKSCVQECPVDCIYEGARMLYINPDECVDCGACKPACRVEAIYWEGD 60 +TYVIG CVDVMD+ CV ECPVDCIYEG R LYI+PDECVDCGAC+P C VEAIY+E D Sbjct 1 MTYVIGQPCVDVMDRGCVDECPVDCIYEGGRSLYIHPDECVDCGACEPVCPVEAIYYEDD 60 Query 61 LPDDQHQHLGDNAAFFHQVLPGRVAPLGSPGGAAAVGPIGVDTPLVAAIPVE 112 LP +L DNA FF + L GR AP+GSPGGA+ +G +G DT LVA +P++ Sbjct 61 LPGHLTPYLADNALFFSETLEGRSAPVGSPGGASKLGALGADTRLVAGLPLQ 112 >gi|331697480|ref|YP_004333719.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Pseudonocardia dioxanivorans CB1190] gi|326952169|gb|AEA25866.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Pseudonocardia dioxanivorans CB1190] Length=114 Score = 152 bits (384), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 70/110 (64%), Positives = 87/110 (80%), Gaps = 0/110 (0%) Query 1 VTYVIGSECVDVMDKSCVQECPVDCIYEGARMLYINPDECVDCGACKPACRVEAIYWEGD 60 +TY+I CVD+MD+SCV CPVDCIY+G R LYINP EC++CGAC+P C V+AI E + Sbjct 1 MTYIIAEPCVDLMDRSCVDVCPVDCIYQGGRKLYINPGECIECGACEPECPVDAIVLEQE 60 Query 61 LPDDQHQHLGDNAAFFHQVLPGRVAPLGSPGGAAAVGPIGVDTPLVAAIP 110 L D++ HL DNAAFF++ LPGR APLG PGGA A GP+ +DTPLVAA+P Sbjct 61 LTDEERPHLADNAAFFYETLPGRDAPLGEPGGAGAFGPVDIDTPLVAALP 110 >gi|254818988|ref|ZP_05223989.1| putative ferredoxin FdxA [Mycobacterium intracellulare ATCC 13950] Length=106 Score = 151 bits (382), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 73/98 (75%), Positives = 81/98 (83%), Gaps = 0/98 (0%) Query 13 MDKSCVQECPVDCIYEGARMLYINPDECVDCGACKPACRVEAIYWEGDLPDDQHQHLGDN 72 MD++CV ECPVDCIYEG R LYI+PDECVDCGAC+P C VEAIY+E DLP+D HL DN Sbjct 1 MDRACVDECPVDCIYEGGRALYIHPDECVDCGACEPVCPVEAIYYEDDLPEDLQPHLADN 60 Query 73 AAFFHQVLPGRVAPLGSPGGAAAVGPIGVDTPLVAAIP 110 AAFF + LPGR PLGSPGGAA VGP+GVDTPLVA P Sbjct 61 AAFFAETLPGRDEPLGSPGGAAKVGPLGVDTPLVAGQP 98 >gi|119718522|ref|YP_925487.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Nocardioides sp. JS614] gi|119539183|gb|ABL83800.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Nocardioides sp. JS614] Length=114 Score = 150 bits (380), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 74/110 (68%), Positives = 85/110 (78%), Gaps = 0/110 (0%) Query 1 VTYVIGSECVDVMDKSCVQECPVDCIYEGARMLYINPDECVDCGACKPACRVEAIYWEGD 60 + YVIG C+DV D++CV ECPVDCIYEGAR LYI PDECVDCGAC+P C VEAIY+E D Sbjct 1 MAYVIGEPCIDVQDRACVDECPVDCIYEGARSLYIQPDECVDCGACEPVCPVEAIYYEDD 60 Query 61 LPDDQHQHLGDNAAFFHQVLPGRVAPLGSPGGAAAVGPIGVDTPLVAAIP 110 LP + + DNA FF +VLPGR P+GSPGGAA +G GVDT LVAA P Sbjct 61 LPAELQPYQDDNARFFAEVLPGRDRPIGSPGGAAKLGAFGVDTELVAARP 110 >gi|258653795|ref|YP_003202951.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Nakamurella multipartita DSM 44233] gi|258557020|gb|ACV79962.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Nakamurella multipartita DSM 44233] Length=114 Score = 145 bits (367), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 68/110 (62%), Positives = 84/110 (77%), Gaps = 0/110 (0%) Query 1 VTYVIGSECVDVMDKSCVQECPVDCIYEGARMLYINPDECVDCGACKPACRVEAIYWEGD 60 +TYVI C+DV+D++CV+ECPVDCIYEGAR LYI+PDECVDCGAC+P C V+AI++E D Sbjct 1 MTYVIAEPCIDVLDRACVEECPVDCIYEGARALYIHPDECVDCGACEPVCPVQAIFYEDD 60 Query 61 LPDDQHQHLGDNAAFFHQVLPGRVAPLGSPGGAAAVGPIGVDTPLVAAIP 110 +P+ DNA FF LPGR P+ SPGGA +G +GVDT LVAA P Sbjct 61 VPNQWEAFTDDNARFFTDTLPGRSQPVASPGGATTIGRLGVDTNLVAAHP 110 >gi|269784345|emb|CBH51374.1| ferredoxin [Amycolatopsis balhimycina DSM 5908] Length=137 Score = 142 bits (357), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 69/114 (61%), Positives = 86/114 (76%), Gaps = 0/114 (0%) Query 1 VTYVIGSECVDVMDKSCVQECPVDCIYEGARMLYINPDECVDCGACKPACRVEAIYWEGD 60 + YVIG CVDV D++CV ECP DCIYEGAR LYI+PDEC++CGAC+ C V A+++E Sbjct 1 MAYVIGLPCVDVKDRACVAECPTDCIYEGARSLYIHPDECMECGACEVVCPVGAVHYEEA 60 Query 61 LPDDQHQHLGDNAAFFHQVLPGRVAPLGSPGGAAAVGPIGVDTPLVAAIPVECP 114 LP +H DN FF +VLPGR APLGSPGGAAAVGP+ DT ++AA+P + P Sbjct 61 LPAALREHAPDNGRFFTEVLPGRDAPLGSPGGAAAVGPLDADTTMIAALPPQSP 114 >gi|312200512|ref|YP_004020573.1| ferredoxin [Frankia sp. EuI1c] gi|311231848|gb|ADP84703.1| ferredoxin [Frankia sp. EuI1c] Length=117 Score = 141 bits (355), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 68/114 (60%), Positives = 88/114 (78%), Gaps = 2/114 (1%) Query 1 VTYVIGSECVDVMDKSCVQECPVDCIYEGARMLYINPDECVDCGACKPACRVEAIYWEGD 60 + YVIG+ CVD+MD+SCV++CP+DCIY GAR LYI+P+EC+DCGAC +C V+AI W+ D Sbjct 1 MAYVIGAACVDIMDQSCVEDCPIDCIYTGARKLYIHPEECIDCGACARSCPVDAISWDRD 60 Query 61 L--PDDQHQHLGDNAAFFHQVLPGRVAPLGSPGGAAAVGPIGVDTPLVAAIPVE 112 L D H+ D AAFF+Q LPG+ APL PGGAA +GP+GVDT L+ AIP + Sbjct 61 LDPADPDIAHIQDAAAFFYQPLPGQPAPLREPGGAAGLGPVGVDTALITAIPAQ 114 >gi|111025066|ref|YP_707486.1| ferredoxin [Rhodococcus jostii RHA1] gi|110824045|gb|ABG99328.1| ferredoxin [Rhodococcus jostii RHA1] Length=128 Score = 140 bits (352), Expect = 9e-32, Method: Compositional matrix adjust. Identities = 67/110 (61%), Positives = 79/110 (72%), Gaps = 0/110 (0%) Query 1 VTYVIGSECVDVMDKSCVQECPVDCIYEGARMLYINPDECVDCGACKPACRVEAIYWEGD 60 +TYVI C+DVMD++CV+ECPVDCIYEG R LYI+PDEC+DCGAC+P C VEAIY+E D Sbjct 1 MTYVIAEPCIDVMDRACVEECPVDCIYEGGRSLYIHPDECIDCGACEPVCPVEAIYYEAD 60 Query 61 LPDDQHQHLGDNAAFFHQVLPGRVAPLGSPGGAAAVGPIGVDTPLVAAIP 110 LP DNA FFH LPG A LG PGGA +G + DT LV+ P Sbjct 61 LPARWEAFTDDNARFFHSPLPGASAALGMPGGAGKLGRLAADTELVSGHP 110 >gi|111220922|ref|YP_711716.1| ferredoxin [Frankia alni ACN14a] gi|111148454|emb|CAJ60125.1| Ferredoxin (partial match) [Frankia alni ACN14a] Length=140 Score = 140 bits (352), Expect = 9e-32, Method: Compositional matrix adjust. Identities = 66/108 (62%), Positives = 81/108 (75%), Gaps = 0/108 (0%) Query 1 VTYVIGSECVDVMDKSCVQECPVDCIYEGARMLYINPDECVDCGACKPACRVEAIYWEGD 60 + YVI + C+DV D+SCV ECPVDC+YEG R LYI+P+EC+DCGAC C V+AI WE D Sbjct 1 MVYVITAACLDVTDRSCVDECPVDCVYEGRRKLYIHPEECIDCGACARVCPVDAIVWERD 60 Query 61 LPDDQHQHLGDNAAFFHQVLPGRVAPLGSPGGAAAVGPIGVDTPLVAA 108 L D H HLGD AFF++ L GR P+G+PGGA +GP+GVDT LV A Sbjct 61 LDGDGHAHLGDAHAFFYRPLSGRPKPIGAPGGAGMLGPVGVDTDLVTA 108 >gi|226359497|ref|YP_002777274.1| 7Fe ferredoxin [Rhodococcus opacus B4] gi|226237981|dbj|BAH48329.1| 7Fe ferredoxin [Rhodococcus opacus B4] Length=128 Score = 139 bits (351), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 67/114 (59%), Positives = 81/114 (72%), Gaps = 0/114 (0%) Query 1 VTYVIGSECVDVMDKSCVQECPVDCIYEGARMLYINPDECVDCGACKPACRVEAIYWEGD 60 +TYVI C+DV+D++CV+ECPVDCIYEG R LYI+PDEC+DCGAC+P C VEAI++E D Sbjct 1 MTYVIAEPCIDVLDRACVEECPVDCIYEGGRSLYIHPDECIDCGACEPVCPVEAIFYEDD 60 Query 61 LPDDQHQHLGDNAAFFHQVLPGRVAPLGSPGGAAAVGPIGVDTPLVAAIPVECP 114 LP DNA FFH LPG A LG PGGA +GP+ DT LV+ P P Sbjct 61 LPARWVAFTDDNARFFHSPLPGASAALGMPGGAGKLGPLAADTELVSGYPPSGP 114 >gi|311740712|ref|ZP_07714539.1| ferredoxin [Corynebacterium pseudogenitalium ATCC 33035] gi|311304232|gb|EFQ80308.1| ferredoxin [Corynebacterium pseudogenitalium ATCC 33035] Length=107 Score = 137 bits (346), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 68/110 (62%), Positives = 83/110 (76%), Gaps = 8/110 (7%) Query 1 VTYVIGSECVDVMDKSCVQECPVDCIYEGARMLYINPDECVDCGACKPACRVEAIYWEGD 60 +TY I CVD+MD+SCV+ECPVDCIYEG RMLYI+PDECVDCGAC+PAC VEAI++E D Sbjct 1 MTYTIAQPCVDIMDRSCVEECPVDCIYEGKRMLYIHPDECVDCGACEPACPVEAIFYEDD 60 Query 61 LPDDQHQHLGDNAAFFHQVLPGRVAPLGSPGGAAAVGPIGVDTPLVAAIP 110 +PD+ + NAAFF LGSPGGAAA+GP D P++AA+P Sbjct 61 VPDEWLDYNDANAAFFDD--------LGSPGGAAALGPQDFDVPMIAALP 102 >gi|296119440|ref|ZP_06837998.1| ferredoxin [Corynebacterium ammoniagenes DSM 20306] gi|295967323|gb|EFG80590.1| ferredoxin [Corynebacterium ammoniagenes DSM 20306] Length=107 Score = 135 bits (341), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 67/110 (61%), Positives = 83/110 (76%), Gaps = 8/110 (7%) Query 1 VTYVIGSECVDVMDKSCVQECPVDCIYEGARMLYINPDECVDCGACKPACRVEAIYWEGD 60 +TY I CVDV+D+SCV+ECPVDCIYEG RMLYI+PDECVDCGAC+PAC VEAI++E D Sbjct 1 MTYTIAQPCVDVLDRSCVEECPVDCIYEGKRMLYIHPDECVDCGACEPACPVEAIFYEDD 60 Query 61 LPDDQHQHLGDNAAFFHQVLPGRVAPLGSPGGAAAVGPIGVDTPLVAAIP 110 +PD+ ++ NAAFF LGSPGGAA +GP D P++AA+P Sbjct 61 VPDEWLEYNDANAAFFDD--------LGSPGGAAGLGPQDFDVPMIAALP 102 >gi|227832808|ref|YP_002834515.1| Ferredoxin [Corynebacterium aurimucosum ATCC 700975] gi|255324435|ref|ZP_05365552.1| ferredoxin [Corynebacterium tuberculostearicum SK141] gi|262182703|ref|ZP_06042124.1| Ferredoxin [Corynebacterium aurimucosum ATCC 700975] gi|227453824|gb|ACP32577.1| Ferredoxin [Corynebacterium aurimucosum ATCC 700975] gi|255298341|gb|EET77641.1| ferredoxin [Corynebacterium tuberculostearicum SK141] Length=107 Score = 135 bits (341), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 68/110 (62%), Positives = 82/110 (75%), Gaps = 8/110 (7%) Query 1 VTYVIGSECVDVMDKSCVQECPVDCIYEGARMLYINPDECVDCGACKPACRVEAIYWEGD 60 +TY I CVDVMD+ CV+ECPVDCIYEG RMLYI+PDECVDCGAC+PAC VEAI++E D Sbjct 1 MTYTIAQPCVDVMDRGCVEECPVDCIYEGKRMLYIHPDECVDCGACEPACPVEAIFYEDD 60 Query 61 LPDDQHQHLGDNAAFFHQVLPGRVAPLGSPGGAAAVGPIGVDTPLVAAIP 110 +PD+ + NAAFF LGSPGGAAA+GP D P++AA+P Sbjct 61 VPDEWLDYNDANAAFFDD--------LGSPGGAAALGPQDFDVPMIAALP 102 >gi|172040342|ref|YP_001800056.1| hypothetical protein cur_0662 [Corynebacterium urealyticum DSM 7109] gi|171851646|emb|CAQ04622.1| unnamed protein product [Corynebacterium urealyticum DSM 7109] Length=105 Score = 135 bits (340), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 65/110 (60%), Positives = 83/110 (76%), Gaps = 8/110 (7%) Query 1 VTYVIGSECVDVMDKSCVQECPVDCIYEGARMLYINPDECVDCGACKPACRVEAIYWEGD 60 +TY I CVDV+D+SCV+ECPVDCIYEG RMLYI+PDECVDCGAC+P C VEA+++E D Sbjct 1 MTYTIAQPCVDVLDRSCVEECPVDCIYEGKRMLYIHPDECVDCGACEPVCPVEAVFYEDD 60 Query 61 LPDDQHQHLGDNAAFFHQVLPGRVAPLGSPGGAAAVGPIGVDTPLVAAIP 110 +P++ ++ NAAFF LGSPGGAAA+GP D P++AA+P Sbjct 61 IPEEWEEYNDANAAFFDD--------LGSPGGAAALGPQDFDAPMIAALP 102 >gi|314922814|gb|EFS86645.1| 4Fe-4S binding domain protein [Propionibacterium acnes HL001PA1] Length=135 Score = 134 bits (337), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 69/110 (63%), Positives = 81/110 (74%), Gaps = 8/110 (7%) Query 1 VTYVIGSECVDVMDKSCVQECPVDCIYEGARMLYINPDECVDCGACKPACRVEAIYWEGD 60 VTYVIG CVDV D++CV+ECPVDCIYEG R LYI+P+ECVDCGAC+P C VEAIY+E D Sbjct 30 VTYVIGLPCVDVKDRACVEECPVDCIYEGERSLYIHPEECVDCGACEPVCPVEAIYYEDD 89 Query 61 LPDDQHQHLGDNAAFFHQVLPGRVAPLGSPGGAAAVGPIGVDTPLVAAIP 110 LP DQ + L NA FF++ LGSPGGAA +GP D P V A+P Sbjct 90 LPGDQEKFLDINAEFFNE--------LGSPGGAARLGPTHKDHPAVEALP 131 >gi|314966245|gb|EFT10344.1| 4Fe-4S binding domain protein [Propionibacterium acnes HL082PA2] gi|314980771|gb|EFT24865.1| 4Fe-4S binding domain protein [Propionibacterium acnes HL110PA3] gi|315090258|gb|EFT62234.1| 4Fe-4S binding domain protein [Propionibacterium acnes HL110PA4] gi|315093409|gb|EFT65385.1| 4Fe-4S binding domain protein [Propionibacterium acnes HL060PA1] gi|315102964|gb|EFT74940.1| 4Fe-4S binding domain protein [Propionibacterium acnes HL050PA2] gi|327327026|gb|EGE68807.1| ferredoxin [Propionibacterium acnes HL103PA1] gi|327331132|gb|EGE72872.1| ferredoxin [Propionibacterium acnes HL097PA1] Length=135 Score = 134 bits (337), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 69/110 (63%), Positives = 81/110 (74%), Gaps = 8/110 (7%) Query 1 VTYVIGSECVDVMDKSCVQECPVDCIYEGARMLYINPDECVDCGACKPACRVEAIYWEGD 60 VTYVIG CVDV D++CV+ECPVDCIYEG R LYI+P+ECVDCGAC+P C VEAIY+E D Sbjct 30 VTYVIGLPCVDVKDRACVEECPVDCIYEGERSLYIHPEECVDCGACEPVCPVEAIYYEDD 89 Query 61 LPDDQHQHLGDNAAFFHQVLPGRVAPLGSPGGAAAVGPIGVDTPLVAAIP 110 LP DQ + L NA FF++ LGSPGGAA +GP D P V A+P Sbjct 90 LPGDQEKFLDINAEFFNE--------LGSPGGAARLGPTHKDHPAVEALP 131 >gi|227503767|ref|ZP_03933816.1| ferredoxin [Corynebacterium striatum ATCC 6940] gi|227199591|gb|EEI79639.1| ferredoxin [Corynebacterium striatum ATCC 6940] Length=107 Score = 134 bits (336), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 67/110 (61%), Positives = 82/110 (75%), Gaps = 8/110 (7%) Query 1 VTYVIGSECVDVMDKSCVQECPVDCIYEGARMLYINPDECVDCGACKPACRVEAIYWEGD 60 +TY I CVDVMD++CV+ECPVDCIYEG R LYI+PDECVDCGAC+PAC VEAI++E D Sbjct 1 MTYTIAQPCVDVMDRACVEECPVDCIYEGKRSLYIHPDECVDCGACEPACPVEAIFYEDD 60 Query 61 LPDDQHQHLGDNAAFFHQVLPGRVAPLGSPGGAAAVGPIGVDTPLVAAIP 110 +PD+ + NAAFF LGSPGGAAA+GP D P++AA+P Sbjct 61 VPDEWIDYNDANAAFFDD--------LGSPGGAAALGPQDFDAPMIAALP 102 >gi|313836966|gb|EFS74680.1| 4Fe-4S binding domain protein [Propionibacterium acnes HL037PA2] gi|314929443|gb|EFS93274.1| 4Fe-4S binding domain protein [Propionibacterium acnes HL044PA1] gi|314971472|gb|EFT15570.1| 4Fe-4S binding domain protein [Propionibacterium acnes HL037PA3] Length=135 Score = 134 bits (336), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 69/110 (63%), Positives = 81/110 (74%), Gaps = 8/110 (7%) Query 1 VTYVIGSECVDVMDKSCVQECPVDCIYEGARMLYINPDECVDCGACKPACRVEAIYWEGD 60 VTYVIG CVDV D++CV+ECPVDCIYEG R LYI+P+ECVDCGAC+P C VEAIY+E D Sbjct 30 VTYVIGLPCVDVKDRACVEECPVDCIYEGERSLYIHPEECVDCGACEPVCPVEAIYYEDD 89 Query 61 LPDDQHQHLGDNAAFFHQVLPGRVAPLGSPGGAAAVGPIGVDTPLVAAIP 110 LP DQ + L NA FF++ LGSPGGAA +GP D P V A+P Sbjct 90 LPGDQEKFLDINAEFFNE--------LGSPGGAARLGPTHKDHPAVEALP 131 >gi|340774597|gb|EGR97081.1| ferredoxin [Propionibacterium acnes SK182B-JCVI] Length=106 Score = 134 bits (336), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 68/110 (62%), Positives = 81/110 (74%), Gaps = 8/110 (7%) Query 1 VTYVIGSECVDVMDKSCVQECPVDCIYEGARMLYINPDECVDCGACKPACRVEAIYWEGD 60 +TYVIG CVDV D++CV+ECPVDCIYEG R LYI+P+ECVDCGAC+P C VEAIY+E D Sbjct 1 MTYVIGLPCVDVKDRACVEECPVDCIYEGERSLYIHPEECVDCGACEPVCPVEAIYYEDD 60 Query 61 LPDDQHQHLGDNAAFFHQVLPGRVAPLGSPGGAAAVGPIGVDTPLVAAIP 110 LPDDQ + L NA FF++ LGSPGGAA +GP D V A+P Sbjct 61 LPDDQEKFLNINAEFFNE--------LGSPGGAARLGPTHKDHAAVEALP 102 >gi|319950850|ref|ZP_08024734.1| 7Fe ferredoxin [Dietzia cinnamea P4] gi|319435505|gb|EFV90741.1| 7Fe ferredoxin [Dietzia cinnamea P4] Length=107 Score = 134 bits (336), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 66/110 (60%), Positives = 80/110 (73%), Gaps = 8/110 (7%) Query 1 VTYVIGSECVDVMDKSCVQECPVDCIYEGARMLYINPDECVDCGACKPACRVEAIYWEGD 60 +TY I CVDVMDKSCV+ECPVDCIYEG RMLYI+PDECVDCGAC+P C VEAI++E D Sbjct 1 MTYTIAEPCVDVMDKSCVEECPVDCIYEGGRMLYIHPDECVDCGACEPVCPVEAIFYEDD 60 Query 61 LPDDQHQHLGDNAAFFHQVLPGRVAPLGSPGGAAAVGPIGVDTPLVAAIP 110 +PD+ ++ NA FF + LGSPGGAA VG + D P + A+P Sbjct 61 VPDEWTEYNAANADFFVE--------LGSPGGAAKVGKVDYDVPFIKALP 102 >gi|336326022|ref|YP_004605988.1| Ferredoxin [Corynebacterium resistens DSM 45100] gi|336102004|gb|AEI09824.1| Ferredoxin [Corynebacterium resistens DSM 45100] Length=107 Score = 134 bits (336), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 66/110 (60%), Positives = 81/110 (74%), Gaps = 8/110 (7%) Query 1 VTYVIGSECVDVMDKSCVQECPVDCIYEGARMLYINPDECVDCGACKPACRVEAIYWEGD 60 +TY I CVDVMD++CV+ECPVDCIYEG R LYI+PDECVDCGAC+P C VEAI++E D Sbjct 1 MTYTIAQPCVDVMDRACVEECPVDCIYEGKRSLYIHPDECVDCGACEPVCPVEAIFYEDD 60 Query 61 LPDDQHQHLGDNAAFFHQVLPGRVAPLGSPGGAAAVGPIGVDTPLVAAIP 110 +PD+ ++ NAAFF LGSPGGAA +GP D P+VAA+P Sbjct 61 IPDEWEEYNAANAAFFDD--------LGSPGGAAKMGPQDFDPPMVAALP 102 >gi|25027716|ref|NP_737770.1| putative ferredoxin [Corynebacterium efficiens YS-314] gi|259506882|ref|ZP_05749782.1| ferredoxin [Corynebacterium efficiens YS-314] gi|23492998|dbj|BAC17970.1| putative ferredoxin [Corynebacterium efficiens YS-314] gi|259165514|gb|EEW50068.1| ferredoxin [Corynebacterium efficiens YS-314] Length=105 Score = 133 bits (335), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 67/110 (61%), Positives = 82/110 (75%), Gaps = 8/110 (7%) Query 1 VTYVIGSECVDVMDKSCVQECPVDCIYEGARMLYINPDECVDCGACKPACRVEAIYWEGD 60 +TY I CVDV+D++CV+ECPVDCIYEG RMLYI+PDECVDCGAC+PAC VEAI++E D Sbjct 1 MTYTIAQPCVDVLDRACVEECPVDCIYEGKRMLYIHPDECVDCGACEPACPVEAIFYEDD 60 Query 61 LPDDQHQHLGDNAAFFHQVLPGRVAPLGSPGGAAAVGPIGVDTPLVAAIP 110 +PD+ + NAAFF LGSPGGAA +GP D PL+AA+P Sbjct 61 VPDEWIDYNEANAAFFDD--------LGSPGGAAKLGPQDFDHPLIAALP 102 >gi|19552328|ref|NP_600330.1| ferredoxin 3 [Corynebacterium glutamicum ATCC 13032] gi|62389992|ref|YP_225394.1| ferredoxin [Corynebacterium glutamicum ATCC 13032] gi|145295244|ref|YP_001138065.1| hypothetical protein cgR_1185 [Corynebacterium glutamicum R] gi|21323869|dbj|BAB98495.1| Ferredoxin 3 [Corynebacterium glutamicum ATCC 13032] gi|41325328|emb|CAF19808.1| FERREDOXIN [Corynebacterium glutamicum ATCC 13032] gi|140845164|dbj|BAF54163.1| hypothetical protein [Corynebacterium glutamicum R] gi|344043550|gb|EGV39240.1| hypothetical protein CgS9114_14377 [Corynebacterium glutamicum S9114] Length=105 Score = 133 bits (335), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 66/110 (60%), Positives = 82/110 (75%), Gaps = 8/110 (7%) Query 1 VTYVIGSECVDVMDKSCVQECPVDCIYEGARMLYINPDECVDCGACKPACRVEAIYWEGD 60 +TY I CVDV+D++CV+ECPVDCIYEG RMLYI+PDECVDCGAC+PAC VEAI++E D Sbjct 1 MTYTIAQPCVDVLDRACVEECPVDCIYEGKRMLYIHPDECVDCGACEPACPVEAIFYEDD 60 Query 61 LPDDQHQHLGDNAAFFHQVLPGRVAPLGSPGGAAAVGPIGVDTPLVAAIP 110 +PD+ + NAAFF LGSPGGAA +GP D P++AA+P Sbjct 61 VPDEWLDYNDANAAFFDD--------LGSPGGAAKLGPQDFDHPMIAALP 102 >gi|282854408|ref|ZP_06263745.1| putative ferredoxin [Propionibacterium acnes J139] gi|282583861|gb|EFB89241.1| putative ferredoxin [Propionibacterium acnes J139] gi|328906846|gb|EGG26612.1| putative ferredoxin [Propionibacterium humerusii P08] Length=106 Score = 133 bits (334), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 68/110 (62%), Positives = 81/110 (74%), Gaps = 8/110 (7%) Query 1 VTYVIGSECVDVMDKSCVQECPVDCIYEGARMLYINPDECVDCGACKPACRVEAIYWEGD 60 +TYVIG CVDV D++CV+ECPVDCIYEG R LYI+P+ECVDCGAC+P C VEAIY+E D Sbjct 1 MTYVIGLPCVDVKDRACVEECPVDCIYEGERSLYIHPEECVDCGACEPVCPVEAIYYEDD 60 Query 61 LPDDQHQHLGDNAAFFHQVLPGRVAPLGSPGGAAAVGPIGVDTPLVAAIP 110 LP DQ + L NA FF++ LGSPGGAA +GP D P V A+P Sbjct 61 LPGDQEKFLDINAEFFNE--------LGSPGGAARLGPTHKDHPAVEALP 102 >gi|86743147|ref|YP_483547.1| 4Fe-4S ferredoxin, iron-sulfur binding [Frankia sp. CcI3] gi|86570009|gb|ABD13818.1| 4Fe-4S ferredoxin, iron-sulfur binding [Frankia sp. CcI3] Length=111 Score = 133 bits (334), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 61/108 (57%), Positives = 79/108 (74%), Gaps = 0/108 (0%) Query 1 VTYVIGSECVDVMDKSCVQECPVDCIYEGARMLYINPDECVDCGACKPACRVEAIYWEGD 60 +T+V+ S C+DV D +CV+ECPVDCIYEG+R LYINPDEC+DCGAC C V+AI Sbjct 1 MTFVVLSPCIDVKDTACVEECPVDCIYEGSRKLYINPDECIDCGACASVCPVDAIKSTRI 60 Query 61 LPDDQHQHLGDNAAFFHQVLPGRVAPLGSPGGAAAVGPIGVDTPLVAA 108 +P + + + D A FF +LPGR AP+G+PGGA +GPIG DT VA+ Sbjct 61 VPASEAEFIADEARFFTDILPGRDAPIGNPGGAGKIGPIGADTAFVAS 108 >gi|313763939|gb|EFS35303.1| 4Fe-4S binding domain protein [Propionibacterium acnes HL013PA1] gi|313771530|gb|EFS37496.1| 4Fe-4S binding domain protein [Propionibacterium acnes HL074PA1] gi|313808190|gb|EFS46664.1| 4Fe-4S binding domain protein [Propionibacterium acnes HL087PA2] 43 more sequence titles Length=135 Score = 133 bits (334), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 68/110 (62%), Positives = 80/110 (73%), Gaps = 8/110 (7%) Query 1 VTYVIGSECVDVMDKSCVQECPVDCIYEGARMLYINPDECVDCGACKPACRVEAIYWEGD 60 VTYVIG CVDV D++CV+ECPVDCIYEG R LYI+P+ECVDCGAC+P C VEAIY+E D Sbjct 30 VTYVIGLPCVDVKDRACVEECPVDCIYEGERSLYIHPEECVDCGACEPVCPVEAIYYEDD 89 Query 61 LPDDQHQHLGDNAAFFHQVLPGRVAPLGSPGGAAAVGPIGVDTPLVAAIP 110 LP DQ + L NA FF++ LGSPGGAA +GP D P V +P Sbjct 90 LPGDQEKFLDINAEFFNE--------LGSPGGAARLGPTHKDHPAVETLP 131 >gi|311111810|ref|YP_003983032.1| ferredoxin [Rothia dentocariosa ATCC 17931] gi|310943304|gb|ADP39598.1| ferredoxin [Rothia dentocariosa ATCC 17931] Length=160 Score = 133 bits (334), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 65/110 (60%), Positives = 81/110 (74%), Gaps = 8/110 (7%) Query 1 VTYVIGSECVDVMDKSCVQECPVDCIYEGARMLYINPDECVDCGACKPACRVEAIYWEGD 60 +TYVI CVDV D++CV+ECPVDCIYEG R LYI+PDECVDCGAC+P C VEAIY+E D Sbjct 55 MTYVIALPCVDVKDRACVEECPVDCIYEGDRTLYIHPDECVDCGACEPVCPVEAIYYEDD 114 Query 61 LPDDQHQHLGDNAAFFHQVLPGRVAPLGSPGGAAAVGPIGVDTPLVAAIP 110 +P++ +++ NA FF LGSPGGAA +GP G D P +AA+P Sbjct 115 VPEEWSEYITANAEFFDD--------LGSPGGAAKMGPTGKDVPFIAALP 156 >gi|284989663|ref|YP_003408217.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Geodermatophilus obscurus DSM 43160] gi|284062908|gb|ADB73846.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Geodermatophilus obscurus DSM 43160] Length=108 Score = 133 bits (334), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 68/110 (62%), Positives = 78/110 (71%), Gaps = 8/110 (7%) Query 1 VTYVIGSECVDVMDKSCVQECPVDCIYEGARMLYINPDECVDCGACKPACRVEAIYWEGD 60 +TYVI CVDV+DK+C+ ECPVDCIYEG RMLYI+PDECVDCGAC+P C VEAIY+E D Sbjct 1 MTYVITQACVDVLDKACIDECPVDCIYEGDRMLYIHPDECVDCGACEPVCPVEAIYYEDD 60 Query 61 LPDDQHQHLGDNAAFFHQVLPGRVAPLGSPGGAAAVGPIGVDTPLVAAIP 110 +PD N FF + LGSPGGAA G IG D PLVAA+P Sbjct 61 VPDKWKDFYNANVEFF--------SDLGSPGGAAKTGKIGKDHPLVAALP 102 >gi|331699698|ref|YP_004335937.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Pseudonocardia dioxanivorans CB1190] gi|326954387|gb|AEA28084.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Pseudonocardia dioxanivorans CB1190] Length=112 Score = 132 bits (333), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 62/106 (59%), Positives = 78/106 (74%), Gaps = 0/106 (0%) Query 1 VTYVIGSECVDVMDKSCVQECPVDCIYEGARMLYINPDECVDCGACKPACRVEAIYWEGD 60 ++YVIG+ CVDV D++CV ECPVDCIY G RM Y+NP EC+DCGAC+P C VEAI E D Sbjct 1 MSYVIGASCVDVTDRACVDECPVDCIYVGGRMAYVNPTECIDCGACEPVCPVEAIVPESD 60 Query 61 LPDDQHQHLGDNAAFFHQVLPGRVAPLGSPGGAAAVGPIGVDTPLV 106 + + + + NAAFF +VLPGR PLG+PGGA VG +G D+ V Sbjct 61 VAESEQDFIAANAAFFLEVLPGRDEPLGNPGGAGQVGEVGADSYFV 106 Lambda K H 0.322 0.142 0.478 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 131546402790 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40